Query 009373
Match_columns 536
No_of_seqs 867 out of 4767
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 03:44:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009373.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009373hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.4E-54 8.2E-59 433.6 42.7 411 54-512 9-430 (445)
2 1p22_A F-BOX/WD-repeat protein 100.0 1.2E-52 4.2E-57 419.7 40.4 386 55-474 2-420 (435)
3 3v7d_B Cell division control p 100.0 3.9E-52 1.3E-56 420.0 41.5 404 54-510 5-452 (464)
4 1vyh_C Platelet-activating fac 100.0 2.2E-43 7.7E-48 349.2 40.0 278 150-466 100-409 (410)
5 1got_B GT-beta; complex (GTP-b 100.0 6E-42 2.1E-46 330.4 42.3 281 150-465 47-340 (340)
6 3ow8_A WD repeat-containing pr 100.0 1.2E-41 4.1E-46 325.1 38.2 278 151-467 25-320 (321)
7 2ynn_A Coatomer subunit beta'; 100.0 2.3E-41 7.7E-46 321.0 39.4 281 150-469 5-303 (304)
8 2pbi_B Guanine nucleotide-bind 100.0 1.8E-40 6E-45 321.7 41.1 283 150-465 56-354 (354)
9 3iz6_a 40S ribosomal protein R 100.0 1.5E-41 5E-46 332.9 30.5 293 150-470 58-377 (380)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.1E-40 1.7E-44 317.5 38.2 303 150-474 7-341 (345)
11 4ery_A WD repeat-containing pr 100.0 2.7E-39 9.3E-44 308.2 40.0 280 150-467 15-311 (312)
12 1erj_A Transcriptional repress 100.0 2.4E-39 8.3E-44 318.6 39.2 282 155-469 61-390 (393)
13 3frx_A Guanine nucleotide-bind 100.0 3.3E-39 1.1E-43 308.3 36.8 286 150-469 9-318 (319)
14 1nr0_A Actin interacting prote 100.0 3.8E-39 1.3E-43 335.5 39.3 321 150-512 139-603 (611)
15 1nr0_A Actin interacting prote 100.0 2.5E-39 8.4E-44 337.0 37.7 348 141-513 42-515 (611)
16 4gqb_B Methylosome protein 50; 100.0 2.2E-39 7.7E-44 311.7 34.4 280 154-470 26-333 (344)
17 2xzm_R RACK1; ribosome, transl 100.0 1.4E-38 4.8E-43 307.3 38.5 292 150-470 13-342 (343)
18 4g56_B MGC81050 protein; prote 100.0 2E-39 6.9E-44 314.5 32.4 286 151-472 35-347 (357)
19 2hes_X YDR267CP; beta-propelle 100.0 2.6E-38 8.8E-43 303.6 39.4 295 150-469 6-329 (330)
20 4aow_A Guanine nucleotide-bind 100.0 6.4E-38 2.2E-42 302.3 38.7 289 151-470 31-339 (340)
21 3odt_A Protein DOA1; ubiquitin 100.0 4E-37 1.4E-41 293.0 39.1 288 146-474 6-302 (313)
22 1vyh_C Platelet-activating fac 100.0 1.5E-37 5.2E-42 307.4 33.2 249 140-408 132-410 (410)
23 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.4E-36 1.2E-40 301.6 41.2 292 140-469 141-443 (445)
24 2ymu_A WD-40 repeat protein; u 100.0 1.9E-36 6.5E-41 314.0 40.2 306 150-511 254-571 (577)
25 1r5m_A SIR4-interacting protei 100.0 8.3E-37 2.8E-41 303.7 32.9 320 152-511 39-416 (425)
26 3ow8_A WD repeat-containing pr 100.0 3.5E-36 1.2E-40 287.2 34.6 238 151-408 73-320 (321)
27 3dm0_A Maltose-binding peripla 100.0 8.4E-36 2.9E-40 315.5 39.3 297 150-467 374-692 (694)
28 3i2n_A WD repeat-containing pr 100.0 3.9E-36 1.3E-40 291.8 33.8 307 150-471 10-356 (357)
29 2ymu_A WD-40 repeat protein; u 100.0 7.9E-36 2.7E-40 309.3 38.0 310 149-513 212-532 (577)
30 1sq9_A Antiviral protein SKI8; 100.0 3.6E-36 1.2E-40 296.7 33.5 300 150-470 8-397 (397)
31 4gqb_B Methylosome protein 50; 100.0 4.6E-36 1.6E-40 288.6 33.1 237 152-410 76-332 (344)
32 1k8k_C P40, ARP2/3 complex 41 100.0 7.5E-36 2.6E-40 291.6 34.4 302 153-472 3-365 (372)
33 2ynn_A Coatomer subunit beta'; 100.0 4.7E-36 1.6E-40 284.4 31.5 266 192-504 5-285 (304)
34 3zwl_B Eukaryotic translation 100.0 6.7E-35 2.3E-39 284.2 40.3 282 150-472 24-350 (369)
35 1gxr_A ESG1, transducin-like e 100.0 1.1E-34 3.7E-39 279.1 38.0 274 152-466 45-335 (337)
36 3vl1_A 26S proteasome regulato 100.0 6.2E-36 2.1E-40 297.4 29.2 307 159-502 57-398 (420)
37 1got_B GT-beta; complex (GTP-b 100.0 6.2E-35 2.1E-39 281.3 34.9 240 148-406 87-340 (340)
38 2pm9_A Protein WEB1, protein t 100.0 2.4E-36 8.3E-41 299.8 23.7 320 157-510 11-404 (416)
39 3gre_A Serine/threonine-protei 100.0 2.4E-35 8.2E-40 294.8 30.4 310 150-465 54-437 (437)
40 3dwl_C Actin-related protein 2 100.0 3.5E-36 1.2E-40 294.7 23.1 300 152-466 5-377 (377)
41 3ei3_B DNA damage-binding prot 100.0 1.5E-34 5.2E-39 283.7 34.8 285 149-468 64-382 (383)
42 3sfz_A APAF-1, apoptotic pepti 100.0 1.1E-34 3.9E-39 327.1 38.2 335 150-513 607-1027(1249)
43 4h5i_A Guanine nucleotide-exch 100.0 2.5E-34 8.5E-39 279.5 34.7 289 158-470 14-345 (365)
44 2pm7_B Protein transport prote 100.0 4.4E-34 1.5E-38 269.9 34.4 246 151-409 2-285 (297)
45 3vl1_A 26S proteasome regulato 100.0 8.5E-34 2.9E-38 281.9 38.0 290 150-468 90-419 (420)
46 3frx_A Guanine nucleotide-bind 100.0 7.6E-34 2.6E-38 271.1 35.5 243 150-409 57-317 (319)
47 3mkq_A Coatomer beta'-subunit; 100.0 1.7E-34 5.8E-39 311.7 34.8 282 150-469 5-303 (814)
48 3sfz_A APAF-1, apoptotic pepti 100.0 1.4E-34 4.6E-39 326.5 35.2 354 140-517 639-1155(1249)
49 1r5m_A SIR4-interacting protei 100.0 3.2E-34 1.1E-38 285.1 33.5 290 156-467 106-424 (425)
50 3k26_A Polycomb protein EED; W 100.0 1.5E-34 5E-39 281.6 29.3 287 152-468 12-366 (366)
51 1pgu_A Actin interacting prote 100.0 1.4E-33 4.9E-38 294.5 38.6 318 149-511 151-605 (615)
52 4g56_B MGC81050 protein; prote 100.0 6.4E-35 2.2E-39 282.9 26.1 301 165-514 12-337 (357)
53 2pm9_A Protein WEB1, protein t 100.0 2.3E-35 7.9E-40 292.8 23.5 304 155-469 64-415 (416)
54 2j04_B YDR362CP, TAU91; beta p 100.0 6.5E-35 2.2E-39 294.7 26.7 303 157-468 132-517 (524)
55 2pbi_B Guanine nucleotide-bind 100.0 3.7E-34 1.3E-38 277.3 30.7 238 150-406 98-354 (354)
56 4a11_B DNA excision repair pro 100.0 1.7E-33 5.8E-38 278.3 36.1 303 140-475 25-372 (408)
57 3fm0_A Protein CIAO1; WDR39,SG 100.0 6.1E-34 2.1E-38 274.9 32.0 251 153-413 56-339 (345)
58 4aez_A CDC20, WD repeat-contai 100.0 1.2E-33 4E-38 279.0 34.4 288 151-476 84-388 (401)
59 1gxr_A ESG1, transducin-like e 100.0 7.8E-34 2.7E-38 273.1 31.4 304 157-510 8-327 (337)
60 1yfq_A Cell cycle arrest prote 100.0 1.3E-33 4.5E-38 272.4 33.0 281 152-465 5-321 (342)
61 2hes_X YDR267CP; beta-propelle 100.0 6.8E-34 2.3E-38 272.8 30.5 288 189-512 3-320 (330)
62 3v7d_B Cell division control p 100.0 1.4E-32 4.6E-37 277.0 40.1 297 139-465 143-460 (464)
63 1p22_A F-BOX/WD-repeat protein 100.0 2.5E-33 8.6E-38 279.8 32.9 257 140-411 155-416 (435)
64 1erj_A Transcriptional repress 100.0 4.6E-33 1.6E-37 273.8 34.2 231 158-409 123-389 (393)
65 3iz6_a 40S ribosomal protein R 100.0 8.1E-35 2.8E-39 285.0 21.5 274 106-410 68-376 (380)
66 4e54_B DNA damage-binding prot 100.0 1.8E-34 6.3E-39 287.9 24.2 284 151-471 112-433 (435)
67 4ery_A WD repeat-containing pr 100.0 7.6E-33 2.6E-37 263.5 33.5 240 149-408 56-311 (312)
68 4gga_A P55CDC, cell division c 100.0 2.3E-32 7.9E-37 271.4 36.5 273 160-474 107-401 (420)
69 2oaj_A Protein SNI1; WD40 repe 100.0 6.1E-33 2.1E-37 299.3 34.6 238 152-407 11-310 (902)
70 1pgu_A Actin interacting prote 100.0 5.6E-33 1.9E-37 290.0 32.9 307 149-514 54-396 (615)
71 3bg1_A Protein SEC13 homolog; 100.0 9.7E-34 3.3E-38 270.0 24.3 243 152-408 7-292 (316)
72 3vu4_A KMHSV2; beta-propeller 100.0 1.5E-32 5E-37 266.2 32.6 299 149-472 10-340 (355)
73 2xzm_R RACK1; ribosome, transl 100.0 4.2E-32 1.4E-36 262.0 34.8 246 150-410 68-341 (343)
74 3mmy_A MRNA export factor; mRN 100.0 1.6E-32 5.3E-37 267.4 31.9 284 149-468 30-346 (368)
75 4ggc_A P55CDC, cell division c 100.0 7.4E-32 2.5E-36 257.2 35.4 267 161-469 28-316 (318)
76 2pm7_B Protein transport prote 100.0 7.6E-32 2.6E-36 254.5 32.6 245 194-468 3-285 (297)
77 4gga_A P55CDC, cell division c 100.0 1.4E-31 4.9E-36 265.7 36.0 253 138-410 125-396 (420)
78 3mkq_A Coatomer beta'-subunit; 100.0 8.7E-32 3E-36 290.5 37.3 328 146-508 43-411 (814)
79 2oaj_A Protein SNI1; WD40 repe 100.0 2.1E-32 7.1E-37 295.2 31.8 349 155-517 55-602 (902)
80 3f3f_A Nucleoporin SEH1; struc 100.0 2.8E-32 9.7E-37 263.2 29.3 292 151-472 4-341 (351)
81 4aow_A Guanine nucleotide-bind 100.0 4.3E-32 1.5E-36 261.5 29.4 290 188-512 26-329 (340)
82 4aez_A CDC20, WD repeat-contai 100.0 1.8E-31 6.3E-36 263.3 34.5 256 140-413 115-384 (401)
83 3jrp_A Fusion protein of prote 100.0 1.4E-31 4.7E-36 261.8 30.8 247 150-409 3-287 (379)
84 4ggc_A P55CDC, cell division c 100.0 7.7E-31 2.6E-35 250.1 34.3 238 153-410 62-316 (318)
85 3dw8_B Serine/threonine-protei 100.0 2.4E-31 8.3E-36 266.4 30.3 247 156-411 26-375 (447)
86 3bg1_A Protein SEC13 homolog; 100.0 7.5E-32 2.6E-36 256.9 25.1 243 196-467 9-292 (316)
87 3gre_A Serine/threonine-protei 100.0 6.7E-32 2.3E-36 269.8 25.4 288 166-474 35-365 (437)
88 3k26_A Polycomb protein EED; W 100.0 9.2E-32 3.1E-36 261.8 25.5 236 157-408 68-365 (366)
89 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-31 3.9E-36 271.0 26.2 245 152-409 201-517 (524)
90 3i2n_A WD repeat-containing pr 100.0 6.8E-31 2.3E-35 254.8 29.0 247 152-410 59-354 (357)
91 3odt_A Protein DOA1; ubiquitin 100.0 4.4E-30 1.5E-34 244.2 33.4 246 141-412 42-299 (313)
92 1sq9_A Antiviral protein SKI8; 100.0 1.1E-30 3.7E-35 257.5 29.9 245 150-410 54-396 (397)
93 3dm0_A Maltose-binding peripla 100.0 1.3E-30 4.4E-35 275.8 31.8 241 150-409 422-693 (694)
94 3jro_A Fusion protein of prote 100.0 3.6E-31 1.2E-35 281.6 27.6 247 151-410 2-286 (753)
95 1k8k_C P40, ARP2/3 complex 41 100.0 2.3E-30 8E-35 252.6 30.0 253 150-413 44-365 (372)
96 3zwl_B Eukaryotic translation 100.0 1.6E-29 5.5E-34 246.1 35.6 256 145-411 61-348 (369)
97 2j04_A TAU60, YPL007P, hypothe 100.0 2.1E-31 7.3E-36 262.1 20.2 301 157-516 14-356 (588)
98 3dwl_C Actin-related protein 2 100.0 2.1E-31 7.1E-36 260.7 20.2 247 149-407 46-377 (377)
99 3ei3_B DNA damage-binding prot 100.0 2.3E-30 7.8E-35 253.9 27.4 293 187-508 60-371 (383)
100 2aq5_A Coronin-1A; WD40 repeat 100.0 4.9E-30 1.7E-34 253.3 27.6 282 161-470 37-344 (402)
101 4e54_B DNA damage-binding prot 100.0 4.4E-31 1.5E-35 263.4 19.8 285 197-508 116-419 (435)
102 3jrp_A Fusion protein of prote 100.0 3.2E-29 1.1E-33 245.0 30.8 250 191-468 2-287 (379)
103 4a11_B DNA excision repair pro 100.0 2.5E-30 8.6E-35 255.5 22.7 313 179-515 22-360 (408)
104 2xyi_A Probable histone-bindin 100.0 2E-29 6.7E-34 251.0 29.0 257 147-410 117-411 (430)
105 3dw8_B Serine/threonine-protei 100.0 1.4E-29 4.8E-34 253.6 27.1 287 200-509 28-436 (447)
106 2aq5_A Coronin-1A; WD40 repeat 100.0 1.9E-29 6.5E-34 249.0 25.1 245 150-410 73-343 (402)
107 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3E-28 1E-32 244.1 33.5 273 158-468 4-391 (450)
108 3lrv_A PRE-mRNA-splicing facto 100.0 5.1E-29 1.8E-33 240.3 24.3 269 165-467 43-332 (343)
109 3mmy_A MRNA export factor; mRN 100.0 2.9E-28 9.9E-33 237.1 29.0 297 184-516 23-342 (368)
110 2xyi_A Probable histone-bindin 100.0 5E-28 1.7E-32 240.9 29.0 261 196-470 124-412 (430)
111 1yfq_A Cell cycle arrest prote 100.0 2.1E-28 7.2E-33 235.8 24.6 274 196-512 7-315 (342)
112 4h5i_A Guanine nucleotide-exch 100.0 2.1E-28 7.3E-33 237.6 24.6 235 152-410 67-344 (365)
113 3lrv_A PRE-mRNA-splicing facto 100.0 3.7E-28 1.3E-32 234.3 23.3 254 208-514 46-327 (343)
114 3vu4_A KMHSV2; beta-propeller 100.0 1.3E-27 4.5E-32 231.4 25.8 285 184-511 3-327 (355)
115 3jro_A Fusion protein of prote 100.0 1.5E-27 5.3E-32 253.7 28.6 247 194-468 3-285 (753)
116 3bws_A Protein LP49; two-domai 100.0 1.7E-26 5.8E-31 230.2 34.4 275 151-468 116-432 (433)
117 2w18_A PALB2, fancn, partner a 100.0 2E-26 6.8E-31 213.1 30.0 271 161-466 42-355 (356)
118 1l0q_A Surface layer protein; 100.0 4.3E-25 1.5E-29 217.0 36.3 320 147-509 21-367 (391)
119 4gq1_A NUP37; propeller, trans 100.0 7.1E-27 2.4E-31 229.5 23.2 256 153-466 84-387 (393)
120 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.7E-25 5.8E-30 224.1 31.5 245 152-409 96-391 (450)
121 1l0q_A Surface layer protein; 99.9 7.2E-25 2.5E-29 215.3 35.3 261 171-474 3-281 (391)
122 4gq1_A NUP37; propeller, trans 99.9 5.6E-27 1.9E-31 230.2 19.7 248 251-509 87-379 (393)
123 3f3f_A Nucleoporin SEH1; struc 99.9 2E-26 6.9E-31 222.1 22.1 286 195-516 6-333 (351)
124 2j04_A TAU60, YPL007P, hypothe 99.9 1.3E-26 4.6E-31 228.2 20.4 221 156-409 83-321 (588)
125 2w18_A PALB2, fancn, partner a 99.9 1.2E-25 4.2E-30 207.9 22.6 180 208-407 143-355 (356)
126 3bws_A Protein LP49; two-domai 99.9 2.7E-23 9.2E-28 207.0 32.5 234 153-409 164-432 (433)
127 1nir_A Nitrite reductase; hemo 99.9 5.6E-23 1.9E-27 209.2 27.5 308 166-511 145-500 (543)
128 1nir_A Nitrite reductase; hemo 99.9 4.4E-22 1.5E-26 202.6 33.1 306 143-474 164-520 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 3E-22 1E-26 197.7 24.4 269 158-469 62-388 (415)
130 2ecf_A Dipeptidyl peptidase IV 99.9 4.7E-21 1.6E-25 204.3 26.4 303 158-510 36-445 (741)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.4E-20 4.8E-25 185.7 25.7 254 152-450 111-408 (415)
132 1k32_A Tricorn protease; prote 99.9 6.2E-20 2.1E-24 202.6 28.6 321 150-510 44-441 (1045)
133 3u4y_A Uncharacterized protein 99.8 3.6E-18 1.2E-22 163.3 32.1 278 165-469 4-305 (331)
134 1pby_B Quinohemoprotein amine 99.8 5.2E-19 1.8E-23 169.4 25.3 261 171-473 2-315 (337)
135 3vgz_A Uncharacterized protein 99.8 8.1E-18 2.8E-22 162.3 32.6 233 157-410 39-304 (353)
136 1xfd_A DIP, dipeptidyl aminope 99.8 7.6E-20 2.6E-24 194.5 19.2 304 160-507 18-427 (723)
137 1ri6_A Putative isomerase YBHE 99.8 4.2E-18 1.4E-22 163.5 28.9 269 172-467 7-307 (343)
138 1k32_A Tricorn protease; prote 99.8 1.2E-18 4.1E-23 192.3 28.5 317 151-509 238-627 (1045)
139 2z3z_A Dipeptidyl aminopeptida 99.8 4.8E-18 1.7E-22 180.0 29.3 282 159-470 82-437 (706)
140 3o4h_A Acylamino-acid-releasin 99.8 6.9E-18 2.4E-22 174.6 27.8 227 158-407 21-274 (582)
141 2ojh_A Uncharacterized protein 99.8 6E-18 2E-22 158.6 23.4 231 151-400 34-293 (297)
142 3vgz_A Uncharacterized protein 99.8 2E-17 6.9E-22 159.5 27.4 258 202-510 44-334 (353)
143 2oit_A Nucleoporin 214KDA; NH2 99.8 1.3E-17 4.3E-22 165.2 25.1 215 180-410 23-279 (434)
144 2ecf_A Dipeptidyl peptidase IV 99.8 2.5E-17 8.5E-22 175.6 28.8 228 160-409 110-413 (741)
145 3u4y_A Uncharacterized protein 99.8 2.8E-17 9.5E-22 157.1 26.1 241 149-410 31-305 (331)
146 2ojh_A Uncharacterized protein 99.8 1.4E-17 4.8E-22 156.0 23.2 248 215-511 17-293 (297)
147 1ri6_A Putative isomerase YBHE 99.8 7.4E-17 2.5E-21 154.8 28.5 241 154-408 33-307 (343)
148 2z3z_A Dipeptidyl aminopeptida 99.8 3.4E-18 1.2E-22 181.2 20.0 294 161-509 28-420 (706)
149 1pby_B Quinohemoprotein amine 99.8 2.7E-17 9.3E-22 157.4 23.8 226 160-410 35-311 (337)
150 1jmx_B Amine dehydrogenase; ox 99.8 4.5E-17 1.5E-21 156.7 24.4 261 163-473 4-330 (349)
151 1xfd_A DIP, dipeptidyl aminope 99.8 2.3E-16 7.7E-21 167.7 30.4 249 143-409 42-393 (723)
152 3hfq_A Uncharacterized protein 99.8 6.3E-16 2.1E-20 148.8 28.9 242 153-408 34-316 (347)
153 3hfq_A Uncharacterized protein 99.8 1.5E-15 5.2E-20 146.1 31.0 259 179-467 15-316 (347)
154 2oit_A Nucleoporin 214KDA; NH2 99.7 2.3E-16 7.7E-21 156.2 23.2 204 157-364 35-279 (434)
155 3scy_A Hypothetical bacterial 99.7 5.5E-15 1.9E-19 143.0 31.6 274 170-467 13-336 (361)
156 4a5s_A Dipeptidyl peptidase 4 99.7 7.2E-16 2.5E-20 163.8 26.6 232 161-409 19-353 (740)
157 3scy_A Hypothetical bacterial 99.7 1.1E-14 3.8E-19 140.8 30.7 242 157-408 48-336 (361)
158 3pe7_A Oligogalacturonate lyas 99.7 7.3E-15 2.5E-19 143.6 26.7 243 150-410 22-330 (388)
159 3o4h_A Acylamino-acid-releasin 99.7 3.5E-16 1.2E-20 161.7 17.3 250 201-512 24-304 (582)
160 3azo_A Aminopeptidase; POP fam 99.7 5.1E-15 1.7E-19 155.6 24.9 280 150-470 15-371 (662)
161 1jmx_B Amine dehydrogenase; ox 99.7 1.2E-14 4.1E-19 139.7 24.6 238 150-410 33-326 (349)
162 1z68_A Fibroblast activation p 99.7 3E-15 1E-19 158.9 20.9 297 163-507 20-427 (719)
163 1z68_A Fibroblast activation p 99.7 3.7E-15 1.3E-19 158.2 20.7 256 141-409 39-391 (719)
164 1jof_A Carboxy-CIS,CIS-muconat 99.6 8E-14 2.7E-18 135.0 27.4 271 172-469 4-342 (365)
165 1q7f_A NHL, brain tumor CG1071 99.6 3E-13 1E-17 126.1 30.1 231 155-409 26-280 (286)
166 3fvz_A Peptidyl-glycine alpha- 99.6 1.8E-13 6.3E-18 130.3 29.0 242 158-409 23-322 (329)
167 3pe7_A Oligogalacturonate lyas 99.6 2E-14 6.9E-19 140.5 22.2 292 183-509 13-370 (388)
168 1jof_A Carboxy-CIS,CIS-muconat 99.6 3.3E-14 1.1E-18 137.7 22.9 238 157-409 38-341 (365)
169 2oiz_A Aromatic amine dehydrog 99.6 7.9E-14 2.7E-18 134.5 23.3 286 169-502 14-360 (361)
170 3c5m_A Oligogalacturonate lyas 99.6 3.9E-14 1.3E-18 138.7 18.6 227 161-410 38-330 (396)
171 3dsm_A Uncharacterized protein 99.5 5.2E-12 1.8E-16 120.1 27.8 255 178-474 15-307 (328)
172 2z2n_A Virginiamycin B lyase; 99.5 1.1E-10 3.8E-15 109.1 36.6 235 152-408 8-254 (299)
173 2oiz_A Aromatic amine dehydrog 99.5 5.3E-12 1.8E-16 121.7 27.3 235 151-410 44-335 (361)
174 3dsm_A Uncharacterized protein 99.5 7.1E-12 2.4E-16 119.2 27.8 229 160-408 45-301 (328)
175 2gop_A Trilobed protease; beta 99.5 8.3E-12 2.9E-16 119.8 28.4 253 159-467 15-330 (347)
176 1q7f_A NHL, brain tumor CG1071 99.5 2.3E-11 7.8E-16 113.3 30.3 230 204-469 35-281 (286)
177 2bkl_A Prolyl endopeptidase; m 99.5 6.8E-13 2.3E-17 139.9 21.7 240 156-410 118-398 (695)
178 2xdw_A Prolyl endopeptidase; a 99.5 8.4E-12 2.9E-16 131.9 28.7 241 156-411 122-416 (710)
179 3e5z_A Putative gluconolactona 99.5 1.7E-11 5.8E-16 114.8 27.2 235 150-409 19-286 (296)
180 2gop_A Trilobed protease; beta 99.5 7.8E-12 2.7E-16 120.0 24.1 220 159-408 59-330 (347)
181 3fvz_A Peptidyl-glycine alpha- 99.5 9.1E-11 3.1E-15 111.6 30.9 230 203-468 28-322 (329)
182 2dg1_A DRP35, lactonase; beta 99.5 8.6E-11 3E-15 112.0 30.6 232 150-400 36-301 (333)
183 3q7m_A Lipoprotein YFGL, BAMB; 99.5 4.4E-11 1.5E-15 116.1 29.0 265 170-473 53-342 (376)
184 2dg1_A DRP35, lactonase; beta 99.5 2.3E-11 8E-16 115.9 26.3 231 159-408 6-262 (333)
185 3azo_A Aminopeptidase; POP fam 99.5 8.3E-12 2.8E-16 131.0 25.3 244 151-410 60-370 (662)
186 3c5m_A Oligogalacturonate lyas 99.5 4.1E-12 1.4E-16 124.2 21.3 280 183-510 13-371 (396)
187 4a5s_A Dipeptidyl peptidase 4 99.5 6.1E-12 2.1E-16 133.6 23.9 244 142-398 40-382 (740)
188 3no2_A Uncharacterized protein 99.4 2.9E-11 1E-15 111.5 24.2 176 169-364 4-196 (276)
189 1rwi_B Serine/threonine-protei 99.4 4.9E-11 1.7E-15 109.9 25.2 229 160-410 25-265 (270)
190 1qks_A Cytochrome CD1 nitrite 99.4 4.5E-10 1.5E-14 114.0 33.7 316 167-511 164-524 (567)
191 3q7m_A Lipoprotein YFGL, BAMB; 99.4 1.9E-10 6.4E-15 111.7 29.0 260 169-465 102-375 (376)
192 1qks_A Cytochrome CD1 nitrite 99.4 7.6E-10 2.6E-14 112.2 34.3 305 160-473 198-543 (567)
193 2qc5_A Streptogramin B lactona 99.4 2.8E-09 9.6E-14 99.5 35.2 233 154-408 15-259 (300)
194 2z2n_A Virginiamycin B lyase; 99.4 1.5E-09 5E-14 101.4 32.9 233 155-409 53-295 (299)
195 2mad_H Methylamine dehydrogena 99.4 2.9E-09 9.8E-14 102.6 33.4 271 166-474 28-356 (373)
196 1yr2_A Prolyl oligopeptidase; 99.3 1.1E-10 3.9E-15 123.8 24.5 239 156-411 160-443 (741)
197 3no2_A Uncharacterized protein 99.3 3.9E-11 1.3E-15 110.7 16.9 236 263-525 5-258 (276)
198 1rwi_B Serine/threonine-protei 99.3 4.2E-10 1.4E-14 103.6 23.6 229 203-471 28-267 (270)
199 3e5z_A Putative gluconolactona 99.3 1.8E-09 6.2E-14 100.9 27.6 184 203-408 32-245 (296)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.9E-09 6.4E-14 101.6 28.0 240 153-409 12-299 (314)
201 2xdw_A Prolyl endopeptidase; a 99.3 8.5E-10 2.9E-14 116.5 27.8 228 204-470 130-416 (710)
202 3sjl_D Methylamine dehydrogena 99.3 5E-10 1.7E-14 106.6 22.8 274 164-475 38-370 (386)
203 3hrp_A Uncharacterized protein 99.3 3.7E-09 1.3E-13 103.3 28.6 229 159-407 131-408 (409)
204 1xip_A Nucleoporin NUP159; bet 99.3 3.8E-10 1.3E-14 107.8 20.8 183 200-395 39-230 (388)
205 1kb0_A Quinohemoprotein alcoho 99.3 1.6E-09 5.6E-14 112.9 26.6 276 170-476 77-515 (677)
206 2bkl_A Prolyl endopeptidase; m 99.3 5E-10 1.7E-14 118.0 23.0 265 168-470 77-399 (695)
207 1fs1_A SKP2 F-BOX, cyclin A/CD 99.2 6.3E-12 2.1E-16 82.9 4.5 46 62-107 7-52 (53)
208 1xip_A Nucleoporin NUP159; bet 99.2 3.8E-10 1.3E-14 107.9 18.5 170 160-349 39-230 (388)
209 2qc5_A Streptogramin B lactona 99.2 2.7E-08 9.2E-13 92.8 31.1 232 154-408 57-299 (300)
210 2mad_H Methylamine dehydrogena 99.2 3.3E-08 1.1E-12 95.2 32.2 239 151-413 60-354 (373)
211 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 1.6E-08 5.5E-13 95.1 28.9 234 203-468 22-299 (314)
212 2hz6_A Endoplasmic reticulum t 99.2 4.3E-13 1.5E-17 129.6 -4.1 252 169-467 8-278 (369)
213 1yiq_A Quinohemoprotein alcoho 99.2 7.7E-09 2.6E-13 108.0 27.2 190 170-366 70-341 (689)
214 3iuj_A Prolyl endopeptidase; h 99.2 3.4E-09 1.2E-13 111.4 22.8 235 156-410 126-406 (693)
215 3c75_H MADH, methylamine dehyd 99.1 1.4E-08 4.9E-13 98.4 24.6 274 168-474 82-408 (426)
216 3sjl_D Methylamine dehydrogena 99.1 1.8E-08 6.1E-13 95.9 24.6 237 151-411 72-365 (386)
217 3g4e_A Regucalcin; six bladed 99.1 2.8E-07 9.4E-12 86.0 30.2 225 155-398 9-261 (297)
218 1yr2_A Prolyl oligopeptidase; 99.1 1.3E-08 4.4E-13 108.0 23.5 265 167-470 115-443 (741)
219 1yiq_A Quinohemoprotein alcoho 99.1 4E-08 1.4E-12 102.6 25.7 239 170-415 121-511 (689)
220 1kb0_A Quinohemoprotein alcoho 99.1 6.7E-08 2.3E-12 100.7 27.2 240 169-415 127-513 (677)
221 2ghs_A AGR_C_1268P; regucalcin 99.0 6.3E-07 2.2E-11 84.7 31.4 216 160-398 50-291 (326)
222 3hxj_A Pyrrolo-quinoline quino 99.0 8.8E-09 3E-13 97.7 16.8 263 156-469 57-325 (330)
223 3dr2_A Exported gluconolactona 99.0 2.3E-07 8E-12 86.8 25.9 228 149-400 35-298 (305)
224 2ad6_A Methanol dehydrogenase 99.0 4E-07 1.4E-11 92.7 28.3 185 170-365 62-337 (571)
225 3hxj_A Pyrrolo-quinoline quino 98.9 1.2E-08 4.2E-13 96.7 14.8 255 165-471 26-286 (330)
226 3g4e_A Regucalcin; six bladed 98.9 1.4E-06 4.8E-11 81.1 28.6 185 205-410 19-230 (297)
227 2hz6_A Endoplasmic reticulum t 98.9 1.7E-10 5.7E-15 111.4 1.5 184 261-473 7-197 (369)
228 3l2o_B F-box only protein 4; s 98.9 4.6E-10 1.6E-14 99.6 4.0 49 63-111 4-52 (312)
229 2e31_A FBS1, F-box only protei 98.9 1E-09 3.5E-14 99.0 6.3 81 63-148 50-131 (297)
230 2iwa_A Glutamine cyclotransfer 98.9 1.3E-06 4.3E-11 78.7 26.4 192 160-364 22-238 (266)
231 1kv9_A Type II quinohemoprotei 98.9 2.5E-07 8.7E-12 96.3 24.8 189 170-366 66-336 (668)
232 3c75_H MADH, methylamine dehyd 98.9 2.6E-07 8.7E-12 89.6 21.7 237 151-411 112-404 (426)
233 3hrp_A Uncharacterized protein 98.9 3.2E-07 1.1E-11 89.6 22.5 185 203-410 135-355 (409)
234 1w6s_A Methanol dehydrogenase 98.9 2.1E-06 7.2E-11 87.4 29.1 186 170-366 62-345 (599)
235 3dr2_A Exported gluconolactona 98.8 8.1E-07 2.8E-11 83.1 23.1 182 204-408 50-266 (305)
236 3nok_A Glutaminyl cyclase; bet 98.8 1.2E-06 4.1E-11 77.8 22.2 177 161-352 57-254 (268)
237 3nol_A Glutamine cyclotransfer 98.8 2.8E-06 9.7E-11 75.4 23.7 183 156-353 38-245 (262)
238 2ghs_A AGR_C_1268P; regucalcin 98.8 1.7E-05 5.9E-10 74.7 31.0 183 205-408 55-259 (326)
239 2iwa_A Glutamine cyclotransfer 98.8 2.8E-06 9.7E-11 76.4 23.8 187 204-410 26-238 (266)
240 1mda_H Methylamine dehydrogena 98.8 2.7E-07 9.1E-12 87.9 18.0 223 151-389 59-365 (368)
241 1flg_A Protein (quinoprotein e 98.8 4.2E-06 1.4E-10 85.3 27.4 189 170-365 68-357 (582)
242 2qe8_A Uncharacterized protein 98.8 8.9E-07 3.1E-11 84.4 20.8 227 159-409 17-278 (343)
243 4a2l_A BT_4663, two-component 98.7 9.2E-05 3.2E-09 79.1 35.7 241 157-410 213-481 (795)
244 1mda_H Methylamine dehydrogena 98.7 2E-06 7E-11 81.8 20.3 217 172-413 34-350 (368)
245 3mbr_X Glutamine cyclotransfer 98.7 1.9E-05 6.6E-10 69.5 24.7 183 156-353 16-224 (243)
246 3iuj_A Prolyl endopeptidase; h 98.7 1E-06 3.5E-11 92.6 19.7 186 204-409 134-359 (693)
247 3nol_A Glutamine cyclotransfer 98.7 1.3E-05 4.4E-10 71.2 23.3 175 209-398 52-244 (262)
248 1w6s_A Methanol dehydrogenase 98.6 1.3E-05 4.3E-10 81.7 25.9 237 173-416 124-510 (599)
249 1kv9_A Type II quinohemoprotei 98.6 9.3E-06 3.2E-10 84.5 24.9 240 170-415 117-494 (668)
250 4a2l_A BT_4663, two-component 98.6 5.7E-05 2E-09 80.7 31.4 277 161-470 133-438 (795)
251 2ad6_A Methanol dehydrogenase 98.6 2.2E-05 7.5E-10 80.0 26.8 239 170-415 115-500 (571)
252 3nok_A Glutaminyl cyclase; bet 98.6 1.1E-05 3.6E-10 71.7 21.0 179 204-396 58-253 (268)
253 2qe8_A Uncharacterized protein 98.6 6.9E-06 2.4E-10 78.1 20.7 203 156-359 64-317 (343)
254 1k3i_A Galactose oxidase precu 98.5 2.3E-05 7.9E-10 81.6 25.5 231 163-409 190-497 (656)
255 3v9f_A Two-component system se 98.4 0.00026 9E-09 75.3 31.5 285 158-469 257-569 (781)
256 3mbr_X Glutamine cyclotransfer 98.4 0.00015 5E-09 63.8 24.0 179 205-398 25-223 (243)
257 2ece_A 462AA long hypothetical 98.4 0.00024 8.1E-09 68.2 26.4 191 208-409 93-352 (462)
258 1flg_A Protein (quinoprotein e 98.4 0.00017 5.8E-09 73.5 26.8 238 170-415 117-522 (582)
259 2p4o_A Hypothetical protein; p 98.4 0.0003 1E-08 65.5 26.2 222 159-400 32-279 (306)
260 3v9f_A Two-component system se 98.4 0.0011 3.8E-08 70.5 33.8 244 159-410 211-479 (781)
261 2fp8_A Strictosidine synthase; 98.3 0.00042 1.4E-08 65.0 26.8 237 154-409 14-313 (322)
262 2ece_A 462AA long hypothetical 98.3 9.5E-05 3.2E-09 71.0 20.6 176 162-351 141-399 (462)
263 1npe_A Nidogen, entactin; glyc 98.2 0.003 1E-07 57.3 28.5 209 159-390 36-260 (267)
264 1fwx_A Nitrous oxide reductase 98.2 0.00022 7.6E-09 71.0 20.9 182 168-363 99-361 (595)
265 2fp8_A Strictosidine synthase; 98.1 0.0026 8.9E-08 59.5 26.6 241 204-468 24-313 (322)
266 1fwx_A Nitrous oxide reductase 98.1 8.8E-05 3E-09 73.8 16.2 245 262-517 100-415 (595)
267 1npe_A Nidogen, entactin; glyc 98.0 0.0046 1.6E-07 56.0 25.4 174 159-345 79-263 (267)
268 2xbg_A YCF48-like protein; pho 98.0 0.012 4.2E-07 55.0 35.2 274 158-466 35-320 (327)
269 3ii7_A Kelch-like protein 7; p 97.9 0.0041 1.4E-07 57.6 24.6 223 171-409 13-272 (306)
270 2vpj_A Kelch-like protein 12; 97.8 0.0073 2.5E-07 55.7 24.1 227 170-409 15-278 (301)
271 2vpj_A Kelch-like protein 12; 97.8 0.0042 1.4E-07 57.4 22.2 228 209-469 14-279 (301)
272 2xn4_A Kelch-like protein 2; s 97.8 0.0064 2.2E-07 56.2 23.2 225 170-410 16-277 (302)
273 2xbg_A YCF48-like protein; pho 97.7 0.029 9.8E-07 52.5 27.3 227 158-407 79-320 (327)
274 2xzh_A Clathrin heavy chain 1; 97.7 0.018 6.1E-07 52.4 23.5 188 272-474 86-296 (365)
275 2p4o_A Hypothetical protein; p 97.7 0.023 7.9E-07 52.5 25.6 230 254-510 32-278 (306)
276 2xn4_A Kelch-like protein 2; s 97.7 0.007 2.4E-07 55.9 21.9 188 260-469 59-277 (302)
277 3ei3_A DNA damage-binding prot 97.7 0.067 2.3E-06 58.9 32.3 182 158-351 553-755 (1158)
278 1k3i_A Galactose oxidase precu 97.7 0.0023 7.9E-08 66.5 20.2 229 162-398 246-530 (656)
279 3ii7_A Kelch-like protein 7; p 97.7 0.015 5E-07 53.8 23.4 227 210-469 12-273 (306)
280 3v65_B Low-density lipoprotein 97.6 0.054 1.8E-06 51.9 29.4 195 253-473 115-323 (386)
281 3amr_A 3-phytase; beta-propell 97.6 0.027 9.1E-07 52.3 22.9 188 169-362 39-262 (355)
282 2xe4_A Oligopeptidase B; hydro 97.6 0.0025 8.5E-08 67.3 18.4 192 156-360 170-395 (751)
283 1zgk_A Kelch-like ECH-associat 97.6 0.011 3.8E-07 54.7 20.9 225 169-409 24-287 (308)
284 3v64_C Agrin; beta propeller, 97.5 0.066 2.3E-06 50.5 29.2 194 253-472 72-279 (349)
285 1zgk_A Kelch-like ECH-associat 97.5 0.022 7.7E-07 52.6 22.1 188 207-410 22-241 (308)
286 2ast_B S-phase kinase-associat 97.5 4.3E-05 1.5E-09 72.3 3.4 43 64-106 9-51 (336)
287 3v64_C Agrin; beta propeller, 97.5 0.074 2.5E-06 50.1 29.0 230 158-409 33-275 (349)
288 3qqz_A Putative uncharacterize 97.5 0.054 1.8E-06 48.2 24.2 198 152-360 20-250 (255)
289 4asc_A Kelch repeat and BTB do 97.5 0.042 1.4E-06 50.9 23.3 220 172-409 7-277 (315)
290 3v65_B Low-density lipoprotein 97.4 0.081 2.8E-06 50.7 25.7 192 158-364 115-319 (386)
291 1bpo_A Protein (clathrin); cla 97.4 0.088 3E-06 50.0 26.0 188 272-474 85-295 (494)
292 3tc9_A Hypothetical hydrolase; 97.4 0.085 2.9E-06 51.4 25.4 145 203-363 141-301 (430)
293 3sov_A LRP-6, low-density lipo 97.3 0.12 4E-06 48.0 26.4 194 254-473 35-243 (318)
294 3p5b_L Low density lipoprotein 97.3 0.15 5.1E-06 49.0 29.4 219 218-474 90-326 (400)
295 2woz_A Kelch repeat and BTB do 97.2 0.09 3.1E-06 48.7 22.4 213 181-409 25-287 (318)
296 3pbp_A Nucleoporin NUP82; beta 97.1 0.068 2.3E-06 50.7 19.8 154 298-463 28-207 (452)
297 1ijq_A LDL receptor, low-densi 97.1 0.18 6.2E-06 46.6 30.2 216 220-473 10-243 (316)
298 3qqz_A Putative uncharacterize 97.1 0.15 5.2E-06 45.2 25.9 161 248-409 21-204 (255)
299 4hw6_A Hypothetical protein, I 97.0 0.24 8.3E-06 48.1 24.5 188 160-361 140-372 (433)
300 1ijq_A LDL receptor, low-densi 97.0 0.21 7.2E-06 46.2 30.8 217 180-410 10-239 (316)
301 4asc_A Kelch repeat and BTB do 97.0 0.16 5.5E-06 46.9 22.0 179 212-409 7-221 (315)
302 3tc9_A Hypothetical hydrolase; 97.0 0.3 1E-05 47.4 24.4 147 160-319 138-300 (430)
303 3sov_A LRP-6, low-density lipo 96.9 0.25 8.5E-06 45.8 26.0 213 179-410 12-239 (318)
304 3m0c_C LDL receptor, low-densi 96.9 0.6 2E-05 49.1 29.9 199 251-473 421-637 (791)
305 3amr_A 3-phytase; beta-propell 96.8 0.3 1E-05 45.3 22.0 181 208-408 38-262 (355)
306 3ei3_A DNA damage-binding prot 96.8 0.48 1.6E-05 52.2 26.8 142 264-409 845-999 (1158)
307 3p5b_L Low density lipoprotein 96.8 0.38 1.3E-05 46.2 29.8 196 155-364 108-321 (400)
308 2be1_A Serine/threonine-protei 96.8 0.035 1.2E-06 51.6 15.2 244 211-472 11-301 (339)
309 2xe4_A Oligopeptidase B; hydro 96.8 0.17 6E-06 53.2 22.6 186 262-465 185-395 (751)
310 2uvk_A YJHT; unknown function, 96.8 0.16 5.4E-06 48.0 20.1 226 169-409 19-342 (357)
311 3ott_A Two-component system se 96.7 0.78 2.7E-05 48.3 32.8 226 158-409 21-260 (758)
312 2p1m_B Transport inhibitor res 96.7 0.00082 2.8E-08 69.0 3.5 37 61-97 3-40 (594)
313 3m0c_C LDL receptor, low-densi 96.6 0.86 3E-05 47.9 28.7 195 156-364 421-633 (791)
314 2woz_A Kelch repeat and BTB do 96.6 0.45 1.5E-05 43.9 22.3 143 262-409 56-231 (318)
315 4hw6_A Hypothetical protein, I 96.6 0.6 2.1E-05 45.3 26.4 144 204-362 144-303 (433)
316 3ott_A Two-component system se 96.5 1 3.5E-05 47.4 32.6 227 158-405 62-303 (758)
317 2uvk_A YJHT; unknown function, 96.5 0.21 7.2E-06 47.0 18.7 144 208-361 18-224 (357)
318 2p9w_A MAL S 1 allergenic prot 96.4 0.61 2.1E-05 42.8 23.5 200 161-362 15-264 (334)
319 1n7d_A LDL receptor, low-densi 96.3 0.017 5.8E-07 60.2 10.9 197 255-475 407-621 (699)
320 1xi4_A Clathrin heavy chain; a 96.3 0.15 5.2E-06 55.9 18.0 191 271-476 84-297 (1630)
321 2be1_A Serine/threonine-protei 96.3 0.039 1.3E-06 51.3 12.0 103 263-365 10-132 (339)
322 1n7d_A LDL receptor, low-densi 96.2 0.044 1.5E-06 57.0 13.5 219 179-411 385-616 (699)
323 3kci_A Probable E3 ubiquitin-p 96.2 0.95 3.2E-05 43.2 28.9 262 202-472 54-349 (389)
324 3pbp_A Nucleoporin NUP82; beta 96.0 0.22 7.5E-06 47.3 15.4 143 262-405 31-208 (452)
325 3qhy_B Beta-lactamase inhibito 96.0 0.83 2.8E-05 41.3 19.2 221 160-409 25-246 (282)
326 2p9w_A MAL S 1 allergenic prot 95.9 1 3.5E-05 41.4 23.2 148 205-364 19-216 (334)
327 4a0p_A LRP6, LRP-6, low-densit 95.8 2.1 7E-05 43.8 27.4 191 158-364 36-238 (628)
328 2xzh_A Clathrin heavy chain 1; 95.6 1.3 4.4E-05 40.5 31.3 223 165-408 73-331 (365)
329 3ogk_B Coronatine-insensitive 95.4 0.0058 2E-07 62.6 2.7 34 64-97 13-47 (592)
330 4a0p_A LRP6, LRP-6, low-densit 95.4 2.7 9.3E-05 42.9 28.8 211 178-410 13-238 (628)
331 3qhy_B Beta-lactamase inhibito 95.4 1.5 5.1E-05 39.6 20.9 221 202-469 25-247 (282)
332 3s94_A LRP-6, low-density lipo 95.3 2.9 9.9E-05 42.6 23.8 194 157-365 38-245 (619)
333 1bpo_A Protein (clathrin); cla 94.8 3 0.0001 39.8 32.5 260 178-475 46-338 (494)
334 4d9s_A UVB-resistance protein 94.0 4.5 0.00015 38.7 36.9 302 158-472 15-361 (406)
335 2zwa_A Leucine carboxyl methyl 93.7 5.5 0.00019 41.2 20.1 198 208-410 396-636 (695)
336 2zwa_A Leucine carboxyl methyl 93.6 2.8 9.6E-05 43.4 17.7 186 168-364 396-636 (695)
337 1xi4_A Clathrin heavy chain; a 93.3 3.7 0.00013 45.5 18.1 186 166-364 73-290 (1630)
338 3kya_A Putative phosphatase; s 92.9 7.7 0.00026 38.0 27.2 193 160-361 140-408 (496)
339 3kya_A Putative phosphatase; s 92.6 8.2 0.00028 37.8 23.5 201 159-364 186-476 (496)
340 3mvd_K Regulator of chromosome 92.3 8.2 0.00028 37.0 36.7 258 202-472 76-378 (423)
341 4d9s_A UVB-resistance protein 92.3 8 0.00027 36.9 32.1 260 199-469 14-306 (406)
342 1a12_A RCC1, regulator of chro 91.9 9.2 0.00031 36.6 36.8 259 201-471 59-368 (413)
343 2ism_A Putative oxidoreductase 90.4 11 0.00039 35.0 24.2 76 151-229 23-114 (352)
344 3s94_A LRP-6, low-density lipo 87.3 27 0.00093 35.4 33.2 155 158-325 83-248 (619)
345 1tl2_A L10, protein (tachylect 87.1 14 0.00047 31.7 13.0 100 254-357 41-157 (236)
346 4hfx_A Transcription elongatio 85.4 0.29 1E-05 35.3 1.3 62 66-137 12-73 (97)
347 1cru_A Protein (soluble quinop 82.0 8.4 0.00029 37.4 10.6 54 333-390 27-86 (454)
348 3sre_A PON1, serum paraoxonase 79.7 39 0.0013 31.4 27.6 189 160-361 51-296 (355)
349 3sre_A PON1, serum paraoxonase 75.8 51 0.0017 30.6 22.1 155 218-390 81-275 (355)
350 3s25_A Hypothetical 7-bladed b 75.2 47 0.0016 29.9 24.7 208 164-404 58-288 (302)
351 3das_A Putative oxidoreductase 72.8 59 0.002 30.0 13.6 115 332-456 31-158 (347)
352 4gq2_M Nucleoporin NUP120; bet 72.4 15 0.00051 39.5 10.0 38 159-196 236-273 (950)
353 3uc1_A DNA gyrase subunit A; D 71.5 61 0.0021 29.6 22.1 236 170-411 3-281 (327)
354 2ism_A Putative oxidoreductase 70.1 68 0.0023 29.6 25.6 96 203-309 35-153 (352)
355 3kci_A Probable E3 ubiquitin-p 67.3 83 0.0028 29.5 33.3 240 170-413 62-349 (389)
356 4gq2_M Nucleoporin NUP120; bet 66.7 1.2E+02 0.0041 32.6 15.5 36 255-290 237-274 (950)
357 2wg3_C Hedgehog-interacting pr 66.6 85 0.0029 30.4 13.2 59 333-391 14-79 (463)
358 1tl2_A L10, protein (tachylect 66.5 62 0.0021 27.7 16.0 177 170-363 4-208 (236)
359 3of7_A Regulator of chromosome 63.3 1.1E+02 0.0038 29.5 29.5 262 200-471 66-408 (473)
360 3no0_A DNA gyrase subunit A; D 62.9 82 0.0028 27.9 15.0 125 332-468 67-196 (276)
361 2g8s_A Glucose/sorbosone dehyd 61.3 1E+02 0.0034 28.4 14.4 57 332-390 17-75 (353)
362 3q6k_A 43.2 kDa salivary prote 59.8 1.1E+02 0.0039 28.5 17.2 135 273-409 123-306 (381)
363 3f7f_A Nucleoporin NUP120; nuc 59.6 14 0.00049 37.7 6.3 37 254-290 222-258 (729)
364 3a9g_A Putative uncharacterize 58.2 1.1E+02 0.0039 28.1 25.1 77 151-229 21-114 (354)
365 3sbq_A Nitrous-oxide reductase 57.7 82 0.0028 31.3 10.8 87 266-352 73-196 (638)
366 3of7_A Regulator of chromosome 51.3 1.8E+02 0.006 28.1 35.3 207 201-410 148-406 (473)
367 3mvd_K Regulator of chromosome 50.2 1.7E+02 0.0058 27.6 33.4 245 160-412 76-377 (423)
368 1suu_A DNA gyrase subunit A; t 47.9 1.6E+02 0.0054 26.6 20.2 195 262-468 7-231 (312)
369 3f7f_A Nucleoporin NUP120; nuc 47.3 27 0.00094 35.7 6.0 36 159-196 222-257 (729)
370 4fhn_B Nucleoporin NUP120; pro 46.8 15 0.0005 40.6 4.4 38 159-196 238-275 (1139)
371 1cru_A Protein (soluble quinop 45.1 2.2E+02 0.0074 27.3 14.6 43 149-191 17-59 (454)
372 4fhn_B Nucleoporin NUP120; pro 44.5 69 0.0024 35.3 9.3 29 262-290 248-276 (1139)
373 3sbq_A Nitrous-oxide reductase 43.7 80 0.0028 31.3 8.3 66 297-364 329-409 (638)
374 3s25_A Hypothetical 7-bladed b 43.6 1.8E+02 0.0061 26.0 31.1 205 168-408 23-254 (302)
375 2wg3_C Hedgehog-interacting pr 43.5 2.1E+02 0.0072 27.5 11.6 40 149-188 4-44 (463)
376 1zi0_A DNA gyrase subunit A; b 41.0 2E+02 0.0068 25.8 28.6 241 168-410 1-278 (307)
377 4a9v_A PHOX; hydrolase, beta-p 39.0 96 0.0033 30.8 8.2 39 312-350 510-548 (592)
378 3uc1_A DNA gyrase subunit A; D 38.7 2.3E+02 0.0077 25.8 18.7 193 264-468 4-228 (327)
379 3a9g_A Putative uncharacterize 36.5 2.5E+02 0.0086 25.7 26.2 136 203-350 33-215 (354)
380 2g8s_A Glucose/sorbosone dehyd 35.9 2.6E+02 0.0088 25.6 24.6 37 151-188 10-47 (353)
381 3no0_A DNA gyrase subunit A; D 33.1 2.5E+02 0.0086 24.7 19.3 156 253-411 67-248 (276)
382 3zwu_A Alkaline phosphatase PH 31.6 1.4E+02 0.0048 29.9 8.2 54 297-350 482-548 (592)
383 2kwv_A RAD30 homolog B, DNA po 31.3 35 0.0012 20.4 2.3 27 54-80 11-37 (48)
384 1a12_A RCC1, regulator of chro 31.0 3.3E+02 0.011 25.4 36.8 248 159-412 59-368 (413)
385 3l6v_A GYRA, DNA gyrase subuni 29.9 3.4E+02 0.012 25.1 28.6 243 166-410 3-317 (370)
386 4hvt_A Ritya.17583.B, post-pro 28.3 5E+02 0.017 26.6 24.4 233 161-408 131-429 (711)
387 3l6v_A GYRA, DNA gyrase subuni 27.8 3.7E+02 0.013 24.9 19.6 150 262-412 6-183 (370)
388 3b7f_A Glycosyl hydrolase, BNR 25.0 4.1E+02 0.014 24.5 22.3 147 254-404 177-367 (394)
389 3das_A Putative oxidoreductase 22.8 4.4E+02 0.015 24.1 27.2 118 291-409 140-292 (347)
390 2lh0_A Histone chaperone RTT10 22.3 85 0.0029 20.9 3.1 31 63-93 8-40 (70)
391 1suu_A DNA gyrase subunit A; t 21.4 4.4E+02 0.015 23.5 28.8 241 167-409 5-283 (312)
No 1
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.4e-54 Score=433.58 Aligned_cols=411 Identities=19% Similarity=0.279 Sum_probs=344.4
Q ss_pred ccccccccccccCCcHHHHHHHhcCCChhhHHHHhhhhHHHHHHhcCChhhHHHHHhHhCCCCCCCC----CCCCCCCCC
Q 009373 54 DVLSNLHRSTITDLPPALISEILNCLDPKELGIVSCVSPILHRLASDHHAWKEFYCERWGLPIASAP----LGAGFSDDK 129 (536)
Q Consensus 54 ~~~~~~~~~~l~~Lp~ei~~~I~~~L~~~~l~~~~~v~~~~~~l~~~~~lW~~~~~~~~~~~~~~~~----~~~~~~~~~ 129 (536)
.+.|.++.|++..||+|++.+||+||++.+|+++++|||+|+.++.++.+|+.++...+ ....... .........
T Consensus 9 ~~~~~~~~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 87 (445)
T 2ovr_B 9 VIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEG-IDEPLHIKRRKVIKPGFIHS 87 (445)
T ss_dssp HHCCCCCCSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTT-CCSCCCCCC--CCSSCCCCC
T ss_pred hcCccccCChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecc-cccccccccceecCCCccCC
Confidence 45677889999999999999999999999999999999999999999999999765443 2111110 001112345
Q ss_pred Cchhhhhhhhh-hccccCCcc-ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe
Q 009373 130 SWKELFVEREF-RSKTFLGRY-SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA 207 (536)
Q Consensus 130 ~Wk~~~~~~~~-~~~~~~~~~-~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~ 207 (536)
.|+..|..+.. ..+|..|++ ....+.+|.+.|.. ++.+++++|++|+.||+|++||+.+++.+..+.+|...|.++.
T Consensus 88 ~wk~~~~~~~~~~~~w~~~~~~~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~ 166 (445)
T 2ovr_B 88 PWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 166 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEE
T ss_pred cHHHHHhhhhhhhhcccCCCcceeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 69999887653 445555555 56789999997643 2455699999999999999999999999999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeE
Q 009373 208 ADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLK 287 (536)
Q Consensus 208 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 287 (536)
.+++.+++|+.||+|++||+.++. ....+.+|...|.+++++++.+++|+.||+|++||+.+++.+.
T Consensus 167 ~~~~~l~s~~~dg~i~vwd~~~~~-------------~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~ 233 (445)
T 2ovr_B 167 MRDNIIISGSTDRTLKVWNAETGE-------------CIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH 233 (445)
T ss_dssp EETTEEEEEETTSCEEEEETTTTE-------------EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEE
T ss_pred ecCCEEEEEeCCCeEEEEECCcCc-------------EEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEE
Confidence 889999999999999999997753 5667789999999999999999999999999999999999988
Q ss_pred eee-ccccEEEEeecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCc
Q 009373 288 VLR-HSDWVYGLAPHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDC 365 (536)
Q Consensus 288 ~~~-~~~~v~~~~~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~ 365 (536)
.+. |...|.++..++..+++++ |+.|++||+++++.+..+. +|...|.++.| ++.++++|+.||.|++||++++
T Consensus 234 ~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~- 309 (445)
T 2ovr_B 234 VLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG- 309 (445)
T ss_dssp EEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEEC-CCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC-
T ss_pred EEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEec-CCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCC-
Confidence 887 8999999999999998888 8999999999999999886 69999999999 7899999999999999999988
Q ss_pred cccccceeeeccCCCCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeec---cccccE
Q 009373 366 TEANVLLVATWIPHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLH---GFECNL 442 (536)
Q Consensus 366 ~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v 442 (536)
..+..+.+|...+.++.++++++++|+.||.|++||++++.. ...+. .|...|
T Consensus 310 -----~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~-------------------~~~~~~~~~~~~~v 365 (445)
T 2ovr_B 310 -----NCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQC-------------------LQTLQGPNKHQSAV 365 (445)
T ss_dssp -----CEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCE-------------------EEEECSTTSCSSCE
T ss_pred -----CEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcE-------------------EEEEccCCCCCCCE
Confidence 677888999999999999999999999999999999987422 12223 377889
Q ss_pred EEEEecCCEEEEecCCCeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhhccccccCCCCcceeEeecc
Q 009373 443 LSVDIGADRIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQCSVAAK 512 (536)
Q Consensus 443 ~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 512 (536)
.++.+++++|++|+.||.|++||+.+++.+....... .........+++|+|+|..+++++.+.+
T Consensus 366 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-----~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 366 TCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE-----SGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECT-----TGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred EEEEECCCEEEEEeCCCeEEEEECCCCceeeeeeccc-----cCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 9999999999999999999999999987654331100 1122345678999999999998877655
No 2
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.2e-52 Score=419.70 Aligned_cols=386 Identities=19% Similarity=0.280 Sum_probs=313.9
Q ss_pred cccccccccccCCcHH----HHHHHhcCCChhhHHHHhhhhHHHHHHhcCChhhHHHHHhHhCCCCC-------------
Q 009373 55 VLSNLHRSTITDLPPA----LISEILNCLDPKELGIVSCVSPILHRLASDHHAWKEFYCERWGLPIA------------- 117 (536)
Q Consensus 55 ~~~~~~~~~l~~Lp~e----i~~~I~~~L~~~~l~~~~~v~~~~~~l~~~~~lW~~~~~~~~~~~~~------------- 117 (536)
+.|.+++|+|..||+| |+.+||+|||+++|+++++|||+|+.++.++.+|+.+|.+.+.....
T Consensus 2 ~~~~~~~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~ 81 (435)
T 1p22_A 2 PAIMLQRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQY 81 (435)
T ss_dssp CCCCSCCCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGG
T ss_pred CChhhhcChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhh
Confidence 4678899999999999 99999999999999999999999999999999999988776521100
Q ss_pred ---CCCCCCCCCCCCCchhhhhhh-----hhhccccCCccceeeee---CccccEEEEEEecCCCEEEEEeCCCcEEEEE
Q 009373 118 ---SAPLGAGFSDDKSWKELFVER-----EFRSKTFLGRYSIDVLY---GHTEAVLTVFVLASAKLLFTSGYDSIVRMWH 186 (536)
Q Consensus 118 ---~~~~~~~~~~~~~Wk~~~~~~-----~~~~~~~~~~~~~~~l~---~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd 186 (536)
..+.....+....|+..+... ..+.+|..|++....+. +|...|+++++ ++++|++|+.||+|++||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd 159 (435)
T 1p22_A 82 LFKNKPPDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWD 159 (435)
T ss_dssp CC---------CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEE
T ss_pred hhccCCCCCCCCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEe
Confidence 000000111122233333321 23556767777666655 46667999877 799999999999999999
Q ss_pred CCCCceeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEE
Q 009373 187 LEDGFSIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRI 266 (536)
Q Consensus 187 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l 266 (536)
+.+++.+..+.+|...|.++.++++.|++|+.||+|++||+.++. ....+.+|...|.+++|+++.+
T Consensus 160 ~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~-------------~~~~~~~h~~~v~~l~~~~~~l 226 (435)
T 1p22_A 160 KNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGE-------------MLNTLIHHCEAVLHLRFNNGMM 226 (435)
T ss_dssp SSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCC-------------EEEEECCCCSCEEEEECCTTEE
T ss_pred CCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCc-------------EEEEEcCCCCcEEEEEEcCCEE
Confidence 999999999999999999999999999999999999999997753 5667789999999999999999
Q ss_pred EEEecCCeEEEEeCCCceEe---Eeee-ccccEEEEeecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEe
Q 009373 267 YSGSWDMTVRVWDRALLKCL---KVLR-HSDWVYGLAPHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARS 341 (536)
Q Consensus 267 ~s~s~dg~i~iwd~~~~~~~---~~~~-~~~~v~~~~~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~ 341 (536)
++|+.||.|++||+.+++.. ..+. |...|.++..+++++++++ |+.|++||+++++.+..+. +|...|.++.++
T Consensus 227 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~ 305 (435)
T 1p22_A 227 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQYR 305 (435)
T ss_dssp EEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEEE
T ss_pred EEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEc-CCCCcEEEEEeC
Confidence 99999999999999987765 3333 8899999999999999988 8999999999999999886 699999999984
Q ss_pred CCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccCCCCCCCc
Q 009373 342 HTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRKLLRSGRPTSGKR 421 (536)
Q Consensus 342 ~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 421 (536)
+.++++|+.||.|++||++++ .++..+.+|...|.+++|++.+|++|+.||.|++||+.+.........
T Consensus 306 --~~~l~~g~~dg~i~iwd~~~~------~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--- 374 (435)
T 1p22_A 306 --DRLVVSGSSDNTIRLWDIECG------ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAG--- 374 (435)
T ss_dssp --TTEEEEEETTSCEEEEETTTC------CEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTT---
T ss_pred --CCEEEEEeCCCeEEEEECCCC------CEEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCCCCcccccc---
Confidence 689999999999999999988 678888999999999999999999999999999999987543221111
Q ss_pred eeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEEEeCCchhhHHH
Q 009373 422 VSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFEIER 474 (536)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~~~ 474 (536)
......+.+|...|.++.+++.+|++|+.||.|++||+.++.....
T Consensus 375 -------~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 420 (435)
T 1p22_A 375 -------TLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQA 420 (435)
T ss_dssp -------TTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC---------
T ss_pred -------chheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 1134456788899999999999999999999999999998765443
No 3
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.9e-52 Score=419.96 Aligned_cols=404 Identities=20% Similarity=0.244 Sum_probs=321.4
Q ss_pred ccccccccccccCCcHHHHHHHhcCCChhhHHHHhhhhHHHHHHhcC-ChhhHHHHHhHhCCCCCCCC--------CCCC
Q 009373 54 DVLSNLHRSTITDLPPALISEILNCLDPKELGIVSCVSPILHRLASD-HHAWKEFYCERWGLPIASAP--------LGAG 124 (536)
Q Consensus 54 ~~~~~~~~~~l~~Lp~ei~~~I~~~L~~~~l~~~~~v~~~~~~l~~~-~~lW~~~~~~~~~~~~~~~~--------~~~~ 124 (536)
.+.|++++|||..||+|++++||+|||+++|+++++|||.|++++.+ +.+|+.++....-....... ....
T Consensus 5 ~~~~~~~~d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (464)
T 3v7d_B 5 LIKDNLKRDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLISENFVSPKGFNSLNLKLSQKYPK 84 (464)
T ss_dssp ----CCCCCHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHHHHTTSCCTTTHHHHHHHHHHHCTT
T ss_pred ccCcccccCChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccccccccchhhhhhhhhccCCC
Confidence 46788999999999999999999999999999999999999999998 89999987544322211100 0001
Q ss_pred CCCCCCchhhhhhhhhh-ccccCCc--cceeeeeCccccE-EEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCC
Q 009373 125 FSDDKSWKELFVEREFR-SKTFLGR--YSIDVLYGHTEAV-LTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLG 200 (536)
Q Consensus 125 ~~~~~~Wk~~~~~~~~~-~~~~~~~--~~~~~l~~h~~~V-~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~ 200 (536)
......|+..|..+... .+|..+. .....+.+|.+.| .++.+ ++++|++|+.||+|++||+.+++.+..+.+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~ 162 (464)
T 3v7d_B 85 LSQQDRLRLSFLENIFILKNWYNPKFVPQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHD 162 (464)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHCTTCCCEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred cccchhhHHHHHHhhhhHhhhcCCCcCcceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCC
Confidence 11234577666555432 2333443 3567899999985 56555 57899999999999999999999999999999
Q ss_pred ceEEEEe--cCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE----eCCEEEEEecCCe
Q 009373 201 CTIRAVA--ADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL----DLTRIYSGSWDMT 274 (536)
Q Consensus 201 ~~v~~~~--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~----~~~~l~s~s~dg~ 274 (536)
..|.++. +++ .+++|+.||+|++||+.++. ....+.+|.+.|.++++ ++.++++|+.||+
T Consensus 163 ~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~-------------~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~ 228 (464)
T 3v7d_B 163 GGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC-------------CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT 228 (464)
T ss_dssp SCEEEEEECSTT-EEEEEETTSCEEEEETTTTE-------------EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSC
T ss_pred cCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCc-------------EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCc
Confidence 9999887 444 99999999999999997753 56678889999999998 3478999999999
Q ss_pred EEEEeCCCceEe-----------------------Eeee-ccccEEEEeecCCEEEEec-CCcEEEEeCCCCcEEEEEcc
Q 009373 275 VRVWDRALLKCL-----------------------KVLR-HSDWVYGLAPHDTTVASTS-GSDVYIWDTNSGCLLTVVNG 329 (536)
Q Consensus 275 i~iwd~~~~~~~-----------------------~~~~-~~~~v~~~~~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~ 329 (536)
|++||+.++... ..+. |...+.++.+++.++++++ |+.|++||+++++.+..+.
T Consensus 229 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~- 307 (464)
T 3v7d_B 229 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS- 307 (464)
T ss_dssp EEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC-
T ss_pred EEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec-
Confidence 999999876532 2333 7888999999999999988 8999999999999999885
Q ss_pred ccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEEeCCCcEEEEECCc
Q 009373 330 AHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 330 ~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~ 409 (536)
+|...|.+++|+|+++++++|+.||.|++||++++ .++..+.+|...|.+++|++.+|++++.||.|++||+++
T Consensus 308 ~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~------~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 308 GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG------ELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT------EEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC------cEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCC
Confidence 69999999999999999999999999999999988 678889999999999999999999999999999999987
Q ss_pred ccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEEEeCCchhhHHHHHHhhhcccchhHHH
Q 009373 410 LLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLENRMR 489 (536)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (536)
..... ...+.+...+.++.+++.++++|+ ||.|++||+.+++.+...... ..
T Consensus 382 ~~~~~------------------~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~---------~~ 433 (464)
T 3v7d_B 382 YSRKF------------------SYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILK---------DA 433 (464)
T ss_dssp CCEEE------------------EEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTT---------TC
T ss_pred Cceee------------------eecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhcc---------CC
Confidence 42211 112445567778888999999999 999999999998776532211 12
Q ss_pred hhhhccccccCCCCcceeEee
Q 009373 490 RRKLQTEMSSKGGRTDQCSVA 510 (536)
Q Consensus 490 ~~~~~~~~~~~g~~~~~~~~~ 510 (536)
....+++|+ |+.++++...
T Consensus 434 ~~v~~v~~~--~~~l~~~~~~ 452 (464)
T 3v7d_B 434 DQIWSVNFK--GKTLVAAVEK 452 (464)
T ss_dssp SEEEEEEEE--TTEEEEEEEE
T ss_pred CcEEEEEec--CCEEEEEEEe
Confidence 345677775 5666655443
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.2e-43 Score=349.23 Aligned_cols=278 Identities=22% Similarity=0.374 Sum_probs=250.4
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~ 227 (536)
....+.+|.++|++++|+|++.+|++|+.||+|++||+.+++....+.+|...|.++. +++++|++|+.||+|++||+
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred ceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 3568899999999999999999999999999999999999999999999999887765 88999999999999999999
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecC
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHD 302 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~ 302 (536)
.++ .....+.+|...|.+++| +++.|++|+.|++|++||+.++.++..+. |...|.++. +++
T Consensus 180 ~~~-------------~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g 246 (410)
T 1vyh_C 180 QGF-------------ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246 (410)
T ss_dssp TSS-------------CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred CCC-------------ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCC
Confidence 664 256677899999999999 67899999999999999999999998887 888898887 788
Q ss_pred CEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCC--------------------CCEEEEEcCCCcEEEEEc
Q 009373 303 TTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHT--------------------GDFLFTGGEDGAIHMYEI 361 (536)
Q Consensus 303 ~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~--------------------~~~l~tg~~dg~i~iwd~ 361 (536)
.++++++ |+.|++||+.+++....+. +|...|.+++|+|+ +.+|++|+.||.|++||+
T Consensus 247 ~~l~s~s~D~~v~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~ 325 (410)
T 1vyh_C 247 TLIASCSNDQTVRVWVVATKECKAELR-EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325 (410)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEET
T ss_pred CEEEEEcCCCeEEEEECCCCceeeEec-CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEEC
Confidence 9999988 8999999999999988885 69999999999996 678999999999999999
Q ss_pred ccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeecccc
Q 009373 362 INDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFE 439 (536)
Q Consensus 362 ~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (536)
+++ .++..+.+|...|++++|+| .+|++|+.||.|++||+.+. .....+.+|.
T Consensus 326 ~~~------~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~-------------------~~~~~~~~h~ 380 (410)
T 1vyh_C 326 STG------MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK-------------------RCMKTLNAHE 380 (410)
T ss_dssp TTT------EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS-------------------CCCEEEECCS
T ss_pred CCC------ceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------------------ceEEEEcCCC
Confidence 988 67888899999999999986 79999999999999999763 3344567888
Q ss_pred ccEEEEEecCC--EEEEecCCCeEEEEeC
Q 009373 440 CNLLSVDIGAD--RIVCGGEEGIVRIWNF 466 (536)
Q Consensus 440 ~~v~~~~~~~~--~l~sg~~Dg~i~vW~~ 466 (536)
..|.++.++++ +|+||+.||+|++|++
T Consensus 381 ~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp SCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 88988888765 9999999999999986
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6e-42 Score=330.44 Aligned_cols=281 Identities=17% Similarity=0.287 Sum_probs=245.5
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEE--ecCCCEEEEEeCCCcEEEEEc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAV--AADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~--~~~~~~l~sg~~dg~i~vwd~ 227 (536)
..+++.+|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+..|...+.++ +|++++|++|+.|+.|++|++
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 357899999999999999999999999999999999999999999998888877665 489999999999999999998
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEE-eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecCC
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL-DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHDT 303 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~~ 303 (536)
.+.. ........+.+|.+.|.++.| +++.+++++.|++|++||+.+++.+..+. |...|.+++ |++.
T Consensus 127 ~~~~---------~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 197 (340)
T 1got_B 127 KTRE---------GNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR 197 (340)
T ss_dssp TTCS---------BSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred ccCC---------CcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCC
Confidence 7642 112345567899999999999 66789999999999999999999998887 889999887 7889
Q ss_pred EEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeecc--CCC
Q 009373 304 TVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWI--PHT 380 (536)
Q Consensus 304 ~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~--~h~ 380 (536)
++++++ |+.|++||+++++....+. +|...|++++|+|++++|++|+.||.|++||++.. ..+..+. .+.
T Consensus 198 ~l~sg~~d~~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~------~~~~~~~~~~~~ 270 (340)
T 1got_B 198 LFVSGACDASAKLWDVREGMCRQTFT-GHESDINAICFFPNGNAFATGSDDATCRLFDLRAD------QELMTYSHDNII 270 (340)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT------EEEEEECCTTCC
T ss_pred EEEEEeCCCcEEEEECCCCeeEEEEc-CCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC------cEEEEEccCCcc
Confidence 999988 9999999999999998885 69999999999999999999999999999999887 3333332 344
Q ss_pred CCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--EEEEec
Q 009373 381 GPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RIVCGG 456 (536)
Q Consensus 381 ~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~sg~ 456 (536)
..|++++|+| .+|++|+.||.|++||+.+. .....+.+|...|.++.++++ +|+||+
T Consensus 271 ~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~-------------------~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKA-------------------DRAGVLAGHDNRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTC-------------------CEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred cceEEEEECCCCCEEEEECCCCeEEEEEcccC-------------------cEeeEeecCCCcEEEEEEcCCCCEEEEEc
Confidence 6899999986 79999999999999999773 233456789999988887765 999999
Q ss_pred CCCeEEEEe
Q 009373 457 EEGIVRIWN 465 (536)
Q Consensus 457 ~Dg~i~vW~ 465 (536)
.||.|++||
T Consensus 332 ~D~~i~iWd 340 (340)
T 1got_B 332 WDSFLKIWN 340 (340)
T ss_dssp TTSCEEEEC
T ss_pred CCccEEecC
Confidence 999999997
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=325.12 Aligned_cols=278 Identities=20% Similarity=0.253 Sum_probs=242.8
Q ss_pred eeeeeCccccEEEEEEecC----CCEEEEEeCCCcEEEEECCCCce--eeeeCCCCceEEEEe--cCCCEEEEEeCCCcE
Q 009373 151 IDVLYGHTEAVLTVFVLAS----AKLLFTSGYDSIVRMWHLEDGFS--IASSKPLGCTIRAVA--ADKKLLVAGGTDGFI 222 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~----~~~l~sgs~dg~v~iwd~~~~~~--~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i 222 (536)
.+.+.+|.+.|++++|+|+ +.+|+||+.|++|+||++.++.. ...+.+|...|.++. +++..+++|+.|++|
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 104 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 4677899999999999985 56999999999999999987753 456789999887765 788999999999999
Q ss_pred EEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe
Q 009373 223 HCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA 299 (536)
Q Consensus 223 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~ 299 (536)
++||+.++. ....+..|...+.+++| ++++|++|+.||.|++||+++++....+. +...|.+++
T Consensus 105 ~lWd~~~~~-------------~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~ 171 (321)
T 3ow8_A 105 RLWDLENGK-------------QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIA 171 (321)
T ss_dssp EEEETTTTE-------------EEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEE
T ss_pred EEEECCCCC-------------EEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEE
Confidence 999997753 45567788888999999 77899999999999999999998888776 777788877
Q ss_pred --ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeec
Q 009373 300 --PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATW 376 (536)
Q Consensus 300 --~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~ 376 (536)
|++++|++++ |+.|++||+++++.+..+. +|...|++++|+|++++|++|+.||.|++||+++. .....+
T Consensus 172 ~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~------~~~~~~ 244 (321)
T 3ow8_A 172 YSPDGKYLASGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA------NLAGTL 244 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC------CEEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc------ceeEEE
Confidence 8999999998 8999999999999998885 69999999999999999999999999999999887 567888
Q ss_pred cCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--EE
Q 009373 377 IPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RI 452 (536)
Q Consensus 377 ~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l 452 (536)
.+|...|.+++|+| .+|++++.|++|++||+++. .+...+.+|...|.++.++++ +|
T Consensus 245 ~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~-------------------~~~~~~~~h~~~v~~v~~s~~g~~l 305 (321)
T 3ow8_A 245 SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR-------------------TCVHTFFDHQDQVWGVKYNGNGSKI 305 (321)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-------------------EEEEEECCCSSCEEEEEECTTSSEE
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-------------------EEEEEEcCCCCcEEEEEECCCCCEE
Confidence 99999999999986 69999999999999999874 233446678888888888765 99
Q ss_pred EEecCCCeEEEEeCC
Q 009373 453 VCGGEEGIVRIWNFS 467 (536)
Q Consensus 453 ~sg~~Dg~i~vW~~~ 467 (536)
++++.||.|++||.+
T Consensus 306 ~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 306 VSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEETTCCEEEEECC
T ss_pred EEEeCCCeEEEEeCC
Confidence 999999999999974
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.3e-41 Score=321.04 Aligned_cols=281 Identities=19% Similarity=0.251 Sum_probs=240.4
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEE--ecCCCEEEEEeCCCcEEEEEc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAV--AADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~--~~~~~~l~sg~~dg~i~vwd~ 227 (536)
..+++.+|.+.|++++|+|++++|++|+.||+|++||+.++..+..+..|..++.++ .+++++|++|+.|++|++||+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 356899999999999999999999999999999999999999999999888877665 589999999999999999999
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCc-eEeEeee-ccccEEEEe--e-
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALL-KCLKVLR-HSDWVYGLA--P- 300 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~-~~~~v~~~~--~- 300 (536)
.++. ....+.+|.+.|.+++| ++.+|++|+.||+|++||++++ .....+. |...|.+++ |
T Consensus 85 ~~~~-------------~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 85 NTGE-------------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK 151 (304)
T ss_dssp TTCC-------------EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTT
T ss_pred CCCc-------------EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCC
Confidence 7753 56678899999999999 6789999999999999999887 4445555 889999988 4
Q ss_pred cCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeC--CCCEEEEEcCCCcEEEEEcccCccccccceeeecc
Q 009373 301 HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSH--TGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWI 377 (536)
Q Consensus 301 ~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~ 377 (536)
++..+++++ |++|++||++++.....+..+|...+..+.|+| ++.+|++|+.||.|++||++++ .++..+.
T Consensus 152 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~------~~~~~~~ 225 (304)
T 2ynn_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK------SCVATLE 225 (304)
T ss_dssp CTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT------EEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC------ccceeeC
Confidence 567888888 999999999998877777667888899999987 6789999999999999999988 6788899
Q ss_pred CCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC----E
Q 009373 378 PHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD----R 451 (536)
Q Consensus 378 ~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~ 451 (536)
+|...|.+++|+| .+|++|+.||+|++||+++. .....+..|...+.++++.++ +
T Consensus 226 ~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (304)
T 2ynn_A 226 GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY-------------------KVEKTLNVGLERSWCIATHPTGRKNY 286 (304)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-------------------CEEEEECCSSSSEEEEEECTTCGGGC
T ss_pred CCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC-------------------ceeeeccCCCccEEEEEECCCCCceE
Confidence 9999999999987 68999999999999999873 233445667777878775543 5
Q ss_pred EEEecCCCeEEEEeCCch
Q 009373 452 IVCGGEEGIVRIWNFSQA 469 (536)
Q Consensus 452 l~sg~~Dg~i~vW~~~~~ 469 (536)
+++|+.|| +.+|++.+.
T Consensus 287 ~asg~~~g-~~~~~~~~~ 303 (304)
T 2ynn_A 287 IASGFDNG-FTVLSLGND 303 (304)
T ss_dssp EEEEETTE-EEEEECC--
T ss_pred EEEecCCc-eEEEEeccC
Confidence 78877665 788887653
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.8e-40 Score=321.75 Aligned_cols=283 Identities=20% Similarity=0.262 Sum_probs=240.6
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEE--EEecCCCEEEEEeCCCcEEEEEc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIR--AVAADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~--~~~~~~~~l~sg~~dg~i~vwd~ 227 (536)
..+++.||.+.|++++|+|++++|+||+.||+|++||..+++....+..|...+. +++|++..+++|+.|+.+++|++
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 4678999999999999999999999999999999999999988888877766554 55699999999999999999998
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--e--
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--P-- 300 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~-- 300 (536)
...... ........+.+|.+.|.+++| ++..|++++.|++|++||+++++.+..+. |...|.++. +
T Consensus 136 ~~~~~~-------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 208 (354)
T 2pbi_B 136 TFDKNE-------NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSE 208 (354)
T ss_dssp CCCTTC-------CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCS
T ss_pred eccccc-------cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCC
Confidence 653210 112345567789999999999 66799999999999999999999998887 888888876 4
Q ss_pred cCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeecc--
Q 009373 301 HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWI-- 377 (536)
Q Consensus 301 ~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~-- 377 (536)
++.++++++ |+.|++||+++++.+..+. +|...|++++|+|++.+|++|+.|++|++||++.. ..+..+.
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~------~~~~~~~~~ 281 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRSGQCVQAFE-THESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD------REVAIYSKE 281 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT------EEEEEECCT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC------cEEEEEcCC
Confidence 467888888 9999999999999998885 69999999999999999999999999999999887 3333333
Q ss_pred CCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--EEE
Q 009373 378 PHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RIV 453 (536)
Q Consensus 378 ~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~ 453 (536)
.+...+.+++|+| .+|++|+.|+.|++||+.++ .....+.+|...|.+++++++ +|+
T Consensus 282 ~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~-------------------~~~~~l~~h~~~v~~l~~spdg~~l~ 342 (354)
T 2pbi_B 282 SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKG-------------------SRVSILFGHENRVSTLRVSPDGTAFC 342 (354)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------------------SEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred CcccceeEEEEeCCCCEEEEEECCCcEEEEECCCC-------------------ceEEEEECCCCcEEEEEECCCCCEEE
Confidence 3445789999986 79999999999999999763 223446788888888887665 999
Q ss_pred EecCCCeEEEEe
Q 009373 454 CGGEEGIVRIWN 465 (536)
Q Consensus 454 sg~~Dg~i~vW~ 465 (536)
+|+.||+|++|+
T Consensus 343 sgs~D~~v~vW~ 354 (354)
T 2pbi_B 343 SGSWDHTLRVWA 354 (354)
T ss_dssp EEETTSEEEEEC
T ss_pred EEcCCCCEEecC
Confidence 999999999996
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.5e-41 Score=332.91 Aligned_cols=293 Identities=18% Similarity=0.235 Sum_probs=239.2
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEE--EEecCCCEEEEEeCCCcEEEEEc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIR--AVAADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~--~~~~~~~~l~sg~~dg~i~vwd~ 227 (536)
..++|.||.+.|++++|+|++++|+||+.||+|+|||+.+++....+..|...|. +++|++++|++|+.|+.|++|++
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEEC
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEEC
Confidence 5678999999999999999999999999999999999999999999988887765 55699999999999999999998
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEEe---CCEEEEEecCCeEEEEeCCCceEeEeee------ccccEEEE
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD---LTRIYSGSWDMTVRVWDRALLKCLKVLR------HSDWVYGL 298 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~------~~~~v~~~ 298 (536)
.+.... .........+.+|.+.|.++.|. +..|++|+.|++|++||+.+++.+..+. |...|.++
T Consensus 138 ~~~~~~------~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~ 211 (380)
T 3iz6_a 138 SSQADR------DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSL 211 (380)
T ss_dssp CCCSSC------CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEE
T ss_pred CCCccc------cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEE
Confidence 754210 01122345577999999999992 4579999999999999999999887762 77888888
Q ss_pred e---ecCCEEEEec-CCcEEEEeCCC-CcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcccccccee
Q 009373 299 A---PHDTTVASTS-GSDVYIWDTNS-GCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLV 373 (536)
Q Consensus 299 ~---~~~~~l~~~~-d~~i~i~d~~~-~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~ 373 (536)
. +++.++++++ |+.|++||++. ++.+..+. +|.+.|++++|+|++.+|++|+.||+|++||++++ ..+
T Consensus 212 ~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~------~~~ 284 (380)
T 3iz6_a 212 SINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH-GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG------HQL 284 (380)
T ss_dssp EECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC-CCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT------EEE
T ss_pred EeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC-CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC------cEE
Confidence 7 3778999888 99999999984 46666664 79999999999999999999999999999999988 344
Q ss_pred eeccCC-------CCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEE
Q 009373 374 ATWIPH-------TGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLS 444 (536)
Q Consensus 374 ~~~~~h-------~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 444 (536)
..+..+ ...|++++|+| .+|++|+.||.|++||+.+...... ......+|...|.+
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~---------------~~~~~~~h~~~v~~ 349 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLN---------------LGTLQNSHEGRISC 349 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEE---------------ECCSCSSCCCCCCE
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEE---------------EecccCCCCCceEE
Confidence 444332 34589999986 7999999999999999876422110 00112467777777
Q ss_pred EEecC--CEEEEecCCCeEEEEeCCchh
Q 009373 445 VDIGA--DRIVCGGEEGIVRIWNFSQAF 470 (536)
Q Consensus 445 ~~~~~--~~l~sg~~Dg~i~vW~~~~~~ 470 (536)
+++++ .+|+||+.||+|++|++....
T Consensus 350 l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 350 LGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 66654 599999999999999998653
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=317.53 Aligned_cols=303 Identities=19% Similarity=0.249 Sum_probs=238.4
Q ss_pred ceeeeeCccc-cEEEEEEecCCCEEEEEeCCCcEEEEECCCCceee---eeCCCCceEEEEe--cCCCEEEEEeCCCcEE
Q 009373 150 SIDVLYGHTE-AVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIA---SSKPLGCTIRAVA--ADKKLLVAGGTDGFIH 223 (536)
Q Consensus 150 ~~~~l~~h~~-~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~---~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~ 223 (536)
.+.++.+|.+ .|.+++|+|+|++||+|+.|++|+|||+.++.... ...+|...|.++. |++++|++|+.|++|+
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEE
Confidence 4678999998 99999999999999999999999999998876432 2367888877655 8999999999999999
Q ss_pred EEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCce---EeEeee-ccccEEE
Q 009373 224 CWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLK---CLKVLR-HSDWVYG 297 (536)
Q Consensus 224 vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~---~~~~~~-~~~~v~~ 297 (536)
+|++.++. ......+.+|.+.|.+++| ++++|++|+.|++|++||+.++. ++..+. |...|.+
T Consensus 87 iw~~~~~~-----------~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~ 155 (345)
T 3fm0_A 87 IWKKNQDD-----------FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKH 155 (345)
T ss_dssp EEEECCC------------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEE
T ss_pred EEEccCCC-----------eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEE
Confidence 99986542 2346678899999999999 67899999999999999998764 344444 8888988
Q ss_pred Ee--ecCCEEEEec-CCcEEEEeCCCCcE--EEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcccc----
Q 009373 298 LA--PHDTTVASTS-GSDVYIWDTNSGCL--LTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEA---- 368 (536)
Q Consensus 298 ~~--~~~~~l~~~~-d~~i~i~d~~~~~~--~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~---- 368 (536)
+. |++.+|++++ |+.|++||.++++. ...+ .+|...|++++|+|+|++|++|+.||+|++||........
T Consensus 156 ~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~-~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~ 234 (345)
T 3fm0_A 156 VVWHPSQELLASASYDDTVKLYREEEDDWVCCATL-EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVAC 234 (345)
T ss_dssp EEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEe-cCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCcccee
Confidence 87 8899999988 89999999988753 3455 4799999999999999999999999999999975542211
Q ss_pred -----ccceeeeccC-CCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccc
Q 009373 369 -----NVLLVATWIP-HTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFEC 440 (536)
Q Consensus 369 -----~~~~~~~~~~-h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (536)
...++..+.+ |...|++++|++ ..|++++.|+.|++|+.........+. .........+|..
T Consensus 235 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~----------~~~~~~~~~~h~~ 304 (345)
T 3fm0_A 235 SGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPT----------FSLTAHLHQAHSQ 304 (345)
T ss_dssp C---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCC----------EEEEEEETTSSSS
T ss_pred eccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceee----------EEEEeeecccccC
Confidence 1123444554 889999999986 799999999999999987642211100 0001122357888
Q ss_pred cEEEEEecCC---EEEEecCCCeEEEEeCCchhhHHH
Q 009373 441 NLLSVDIGAD---RIVCGGEEGIVRIWNFSQAFEIER 474 (536)
Q Consensus 441 ~v~~~~~~~~---~l~sg~~Dg~i~vW~~~~~~~~~~ 474 (536)
.|.+++++++ +||||+.||+|++|++.+++.+..
T Consensus 305 ~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 305 DVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp CEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred cEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 8999988764 899999999999999998765543
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.7e-39 Score=308.19 Aligned_cols=280 Identities=24% Similarity=0.343 Sum_probs=243.9
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~ 227 (536)
...++.+|.+.|++++|+|++++|++|+.||.|++|++.+++....+.+|...|.++. |++++|++|+.||.|++||+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 4568899999999999999999999999999999999999999999999998887665 89999999999999999999
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecC
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHD 302 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~ 302 (536)
.++. ....+.+|...|.+++| ++++|++|+.||+|++||+++++.+..+. |...|.++. +++
T Consensus 95 ~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 161 (312)
T 4ery_A 95 SSGK-------------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 161 (312)
T ss_dssp TTCC-------------EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred CCCc-------------EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCC
Confidence 7653 56678899999999999 67899999999999999999999888887 888898887 788
Q ss_pred CEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCC
Q 009373 303 TTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTG 381 (536)
Q Consensus 303 ~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~ 381 (536)
.++++++ |+.|++||+++++.+..+...+...+..++|+|++++|++++.||.|++||++++ ..+..+.+|..
T Consensus 162 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~------~~~~~~~~~~~ 235 (312)
T 4ery_A 162 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG------KCLKTYTGHKN 235 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT------EEEEEECSSCC
T ss_pred CEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC------cEEEEEEecCC
Confidence 8999888 8999999999999888876667788999999999999999999999999999988 56777778876
Q ss_pred CeEEE--EEc---CCeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--EEEE
Q 009373 382 PVNSL--AFE---FPWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RIVC 454 (536)
Q Consensus 382 ~v~~l--~~~---~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~s 454 (536)
.+.++ .++ +.+|++|+.||.|++||+.+. .....+.+|...|.+++++++ ++++
T Consensus 236 ~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~-------------------~~~~~~~~h~~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 236 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK-------------------EIVQKLQGHTDVVISTACHPTENIIAS 296 (312)
T ss_dssp SSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC-------------------CEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred ceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc-------------------hhhhhhhccCCcEEEEeecCcCCceEE
Confidence 54332 332 378999999999999999873 334456788888888887665 8888
Q ss_pred ec--CCCeEEEEeCC
Q 009373 455 GG--EEGIVRIWNFS 467 (536)
Q Consensus 455 g~--~Dg~i~vW~~~ 467 (536)
++ .||+|++|+.+
T Consensus 297 ~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 297 AALENDKTIKLWKSD 311 (312)
T ss_dssp EECTTTCCEEEEECC
T ss_pred EEccCCccEEEecCC
Confidence 86 69999999975
No 12
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-39 Score=318.64 Aligned_cols=282 Identities=25% Similarity=0.375 Sum_probs=235.9
Q ss_pred eCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCc------------------eE--EEEecCCCEEE
Q 009373 155 YGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGC------------------TI--RAVAADKKLLV 214 (536)
Q Consensus 155 ~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~------------------~v--~~~~~~~~~l~ 214 (536)
.+|.+.|.+++|+|+|++|++|+ |+++++|++.+++.+..+..+.. .| .+++|++++|+
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 47999999999999999999987 78999999999998887765431 24 45569999999
Q ss_pred EEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeeecc
Q 009373 215 AGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLRHS 292 (536)
Q Consensus 215 sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 292 (536)
+|+.||+|++||+.++. ....+.+|...|.+++| +++.|++|+.|++|++||++++++...+.+.
T Consensus 140 s~~~d~~i~iwd~~~~~-------------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~ 206 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRK-------------IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE 206 (393)
T ss_dssp EEETTSCEEEEETTTTE-------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred EEcCCCeEEEEECCCCc-------------EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC
Confidence 99999999999997653 55678899999999999 6789999999999999999999998888888
Q ss_pred ccEEEEe--e-cCCEEEEec-CCcEEEEeCCCCcEEEEEc------cccccceEEEEEeCCCCEEEEEcCCCcEEEEEcc
Q 009373 293 DWVYGLA--P-HDTTVASTS-GSDVYIWDTNSGCLLTVVN------GAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEII 362 (536)
Q Consensus 293 ~~v~~~~--~-~~~~l~~~~-d~~i~i~d~~~~~~~~~~~------~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~ 362 (536)
..+.++. | +++++++++ |+.|++||+++++.+..+. .+|...|++++|+|++++|++|+.||.|++||++
T Consensus 207 ~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 207 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 286 (393)
T ss_dssp SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 8888776 5 788999988 8999999999998877763 3688999999999999999999999999999997
Q ss_pred cCcccc------ccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeee
Q 009373 363 NDCTEA------NVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRM 434 (536)
Q Consensus 363 ~~~~~~------~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (536)
+..... ...+...+.+|...|.+++|++ .+|++|+.||.|++||++++ .+...
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~-------------------~~~~~ 347 (393)
T 1erj_A 287 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG-------------------NPLLM 347 (393)
T ss_dssp --------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC-------------------CEEEE
T ss_pred CCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC-------------------eEEEE
Confidence 653211 1234567789999999999976 79999999999999999873 23345
Q ss_pred eccccccEEEEEecC--------CEEEEecCCCeEEEEeCCch
Q 009373 435 LHGFECNLLSVDIGA--------DRIVCGGEEGIVRIWNFSQA 469 (536)
Q Consensus 435 ~~~~~~~v~~~~~~~--------~~l~sg~~Dg~i~vW~~~~~ 469 (536)
+.+|...|.++.+.+ ++|+||+.||+|++|++...
T Consensus 348 l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 348 LQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred ECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 678989999988753 48999999999999998653
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.3e-39 Score=308.29 Aligned_cols=286 Identities=23% Similarity=0.354 Sum_probs=228.4
Q ss_pred ceeeeeCccccEEEEEEecCC-CEEEEEeCCCcEEEEECCC-----CceeeeeCCCCceEEEE--ecCCCEEEEEeCCCc
Q 009373 150 SIDVLYGHTEAVLTVFVLASA-KLLFTSGYDSIVRMWHLED-----GFSIASSKPLGCTIRAV--AADKKLLVAGGTDGF 221 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~dg~v~iwd~~~-----~~~~~~~~~~~~~v~~~--~~~~~~l~sg~~dg~ 221 (536)
...+|.||.+.|++++|+|++ ++|+||+.|++|++|++.+ +..+..+.+|...|.++ ++++.+|++|+.|++
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 356899999999999999965 8999999999999999864 34567788998888765 489999999999999
Q ss_pred EEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeeeccccEEEEe
Q 009373 222 IHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLRHSDWVYGLA 299 (536)
Q Consensus 222 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~ 299 (536)
|++||+.++. ....+.+|.+.|.+++| ++.+|++|+.|++|++||++.........|...|.++.
T Consensus 89 v~~wd~~~~~-------------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~ 155 (319)
T 3frx_A 89 LRLWDVATGE-------------TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVR 155 (319)
T ss_dssp EEEEETTTTE-------------EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEE
T ss_pred EEEEECCCCC-------------eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEE
Confidence 9999997753 56678899999999999 66899999999999999997544433344888998887
Q ss_pred --e------cCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcccccc
Q 009373 300 --P------HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANV 370 (536)
Q Consensus 300 --~------~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~ 370 (536)
| ++..+++++ |+.|++||+++++....+. +|...|++++|+|++++|++|+.||.|++||+.+.
T Consensus 156 ~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~------ 228 (319)
T 3frx_A 156 VVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK------ 228 (319)
T ss_dssp ECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC-CCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTT------
T ss_pred EccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec-CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC------
Confidence 3 344777777 8999999999999888885 69999999999999999999999999999999988
Q ss_pred ceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCC-eeeeccccccEEEEEe
Q 009373 371 LLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPP-QRMLHGFECNLLSVDI 447 (536)
Q Consensus 371 ~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~ 447 (536)
..+..+.. ...|.+++|+| .+|++++ ++.+++|++........ .... ......+...+.++++
T Consensus 229 ~~~~~~~~-~~~v~~~~~sp~~~~la~~~-~~~i~v~~~~~~~~~~~------------~~~~~~~~~~~~~~~v~~~~~ 294 (319)
T 3frx_A 229 KAMYTLSA-QDEVFSLAFSPNRYWLAAAT-ATGIKVFSLDPQYLVDD------------LRPEFAGYSKAAEPHAVSLAW 294 (319)
T ss_dssp EEEEEEEC-CSCEEEEEECSSSSEEEEEE-TTEEEEEEETTEEEEEE------------ECCCCTTCCGGGCCCEEEEEE
T ss_pred cEEEEecC-CCcEEEEEEcCCCCEEEEEc-CCCcEEEEeCcCeeeec------------cCccccccccCcCcceeEEEE
Confidence 55666654 46899999987 4666665 45699999876422111 1110 1112334455666665
Q ss_pred c--CCEEEEecCCCeEEEEeCCch
Q 009373 448 G--ADRIVCGGEEGIVRIWNFSQA 469 (536)
Q Consensus 448 ~--~~~l~sg~~Dg~i~vW~~~~~ 469 (536)
+ +++|++|+.||.|++||+.++
T Consensus 295 spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 295 SADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CTTSSEEEEEETTSCEEEEEEEEC
T ss_pred CCCCCEEEEeecCceEEEEEEeec
Confidence 5 559999999999999999764
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.8e-39 Score=335.55 Aligned_cols=321 Identities=21% Similarity=0.246 Sum_probs=251.4
Q ss_pred ceeeeeCccccEEEEEEecCCC-EEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEE
Q 009373 150 SIDVLYGHTEAVLTVFVLASAK-LLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWR 226 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd 226 (536)
....+.+|.+.|++++|+|++. .|++|+.|++|++||..+++....+.+|...|.++. |++++|++|+.|++|++||
T Consensus 139 ~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd 218 (611)
T 1nr0_A 139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218 (611)
T ss_dssp BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence 4567899999999999999987 699999999999999999999999999998887665 8999999999999999999
Q ss_pred cccCccceecccCcccccceEEe-------eCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEee--------
Q 009373 227 AVEVLPHLFDISGSEKQNTQFRL-------WEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVL-------- 289 (536)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~-------~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~-------- 289 (536)
+.++. ....+ .+|.+.|.+++| ++.+|++++.|++|++||+.+++++..+
T Consensus 219 ~~~g~-------------~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~ 285 (611)
T 1nr0_A 219 GVDGT-------------KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIED 285 (611)
T ss_dssp TTTCC-------------EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGG
T ss_pred CCCCc-------------EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccc
Confidence 87764 22222 279999999999 7789999999999999999987765433
Q ss_pred ------------------------------------eccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccc
Q 009373 290 ------------------------------------RHSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGA 330 (536)
Q Consensus 290 ------------------------------------~~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~ 330 (536)
.|...|.+++ |++++|++++ |+.|++||+.+++....+..+
T Consensus 286 ~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~ 365 (611)
T 1nr0_A 286 QQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDV 365 (611)
T ss_dssp CEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCS
T ss_pred eeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccC
Confidence 1667788877 8899999998 899999999876543322100
Q ss_pred --------------------------------------------------------------------------------
Q 009373 331 -------------------------------------------------------------------------------- 330 (536)
Q Consensus 331 -------------------------------------------------------------------------------- 330 (536)
T Consensus 366 h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~ 445 (611)
T 1nr0_A 366 HATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV 445 (611)
T ss_dssp CSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE
T ss_pred CcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee
Confidence
Q ss_pred -cccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEEC
Q 009373 331 -HVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDV 407 (536)
Q Consensus 331 -~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~ 407 (536)
|...+.+++|+|+|++|++|+.|+.|++||+.+... ..+.. .+|...|++++|+| .+|++++.|++|++||+
T Consensus 446 ~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~----~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~ 520 (611)
T 1nr0_A 446 PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV----SEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSV 520 (611)
T ss_dssp ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEE----EEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEG
T ss_pred ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCce----eeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEc
Confidence 223467899999999999999999999999987521 22333 67999999999987 79999999999999999
Q ss_pred CcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--EEEEecCCCeEEEEeCCchhhHHHHHHhhhcccch
Q 009373 408 RKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLE 485 (536)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~ 485 (536)
.+...... .....+|...|.+++|+++ +|++|+.|++|++|++.++.... ...+.++
T Consensus 521 ~~~~~~~~----------------~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~--~~~~~~h--- 579 (611)
T 1nr0_A 521 ANNFELAH----------------TNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHP--IIIKGAH--- 579 (611)
T ss_dssp GGTTEESC----------------CCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCC--EEETTSS---
T ss_pred CCCCceee----------------eeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCccccc--chhhccC---
Confidence 76211100 0012347788888887765 99999999999999998764211 0001111
Q ss_pred hHHHhhhhccccccCCCCcceeEeecc
Q 009373 486 NRMRRRKLQTEMSSKGGRTDQCSVAAK 512 (536)
Q Consensus 486 ~~~~~~~~~~~~~~~g~~~~~~~~~~~ 512 (536)
....+.+++|+|+|. +++++.+.+
T Consensus 580 --~~~~v~~v~fs~d~~-l~s~~~D~~ 603 (611)
T 1nr0_A 580 --AMSSVNSVIWLNETT-IVSAGQDSN 603 (611)
T ss_dssp --TTSCEEEEEEEETTE-EEEEETTSC
T ss_pred --cccCeeEEEEcCCCE-EEEecCCCC
Confidence 134567899999998 888765443
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.5e-39 Score=337.01 Aligned_cols=348 Identities=16% Similarity=0.211 Sum_probs=260.6
Q ss_pred hccccCCccceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCc--eeeeeCCCCceEEEEe--cCCCEEEEE
Q 009373 141 RSKTFLGRYSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGF--SIASSKPLGCTIRAVA--ADKKLLVAG 216 (536)
Q Consensus 141 ~~~~~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~--~~~~~l~sg 216 (536)
+.+..........+.+|.+.|++++|+|+|++||+|+.|++|+|||+.+++ ....+.+|...|.+++ |+++.|+++
T Consensus 42 ~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~ 121 (611)
T 1nr0_A 42 YTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAV 121 (611)
T ss_dssp EEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEE
T ss_pred EEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEE
Confidence 334444445678899999999999999999999999999999999997553 4556778888876655 899999998
Q ss_pred eCC----CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEe--CC-EEEEEecCCeEEEEeCCCceEeEee
Q 009373 217 GTD----GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD--LT-RIYSGSWDMTVRVWDRALLKCLKVL 289 (536)
Q Consensus 217 ~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~dg~i~iwd~~~~~~~~~~ 289 (536)
+.+ +.|++||... ....+.+|.+.|.+++|. +. .|++|+.|++|++||..++++...+
T Consensus 122 ~~~~~~~~~v~~wd~~~---------------~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l 186 (611)
T 1nr0_A 122 GEGRERFGHVFLFDTGT---------------SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF 186 (611)
T ss_dssp ECCSSCSEEEEETTTCC---------------BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE
T ss_pred ECCCCceeEEEEeeCCC---------------CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeee
Confidence 875 4788887422 334577999999999994 33 6999999999999999999988888
Q ss_pred e-ccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEcc------ccccceEEEEEeCCCCEEEEEcCCCcEEEE
Q 009373 290 R-HSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNG------AHVGNTKSLARSHTGDFLFTGGEDGAIHMY 359 (536)
Q Consensus 290 ~-~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~------~~~~~i~~l~~~~~~~~l~tg~~dg~i~iw 359 (536)
. |...|.+++ |++++|++++ |++|++||+.+++.+..+.. +|.+.|++++|+|++++|++|+.|++|++|
T Consensus 187 ~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lW 266 (611)
T 1nr0_A 187 GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW 266 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 7 999999987 8899999988 99999999999998888743 699999999999999999999999999999
Q ss_pred EcccCcccccc-------------------------------------ceeeeccCCCCCeEEEEEcC--CeEEEEeCCC
Q 009373 360 EIINDCTEANV-------------------------------------LLVATWIPHTGPVNSLAFEF--PWLVSAAGDG 400 (536)
Q Consensus 360 d~~~~~~~~~~-------------------------------------~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg 400 (536)
|+.++...... .....+.+|...|++++|+| .+|++++.|+
T Consensus 267 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~ 346 (611)
T 1nr0_A 267 NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEG 346 (611)
T ss_dssp ETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 99876422111 12345678999999999986 7999999999
Q ss_pred cEEEEECCcccccCCCC--CCCceeeE-------------------Ee------------------------eCCC----
Q 009373 401 KLSLIDVRKLLRSGRPT--SGKRVSRV-------------------IE------------------------VEPP---- 431 (536)
Q Consensus 401 ~i~vwd~~~~~~~~~~~--~~~~~~~~-------------------~~------------------------~~~~---- 431 (536)
+|++||+.++....... ....+..+ .. +.+.
T Consensus 347 ~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~ 426 (611)
T 1nr0_A 347 HINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIA 426 (611)
T ss_dssp CEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCE
T ss_pred cEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEE
Confidence 99999998754322110 00000000 00 0000
Q ss_pred ---------------eeeeccccccEEEEE--ecCCEEEEecCCCeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhhc
Q 009373 432 ---------------QRMLHGFECNLLSVD--IGADRIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLENRMRRRKLQ 494 (536)
Q Consensus 432 ---------------~~~~~~~~~~v~~~~--~~~~~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (536)
...+ .|...+.+++ +++++|++|+.||+|++||+.++.... ... ......+.+
T Consensus 427 ~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~--------~~~-~~h~~~v~~ 496 (611)
T 1nr0_A 427 VAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSE--------VKT-IVHPAEITS 496 (611)
T ss_dssp EEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEE--------EEE-EECSSCEEE
T ss_pred EEEeCceEEEEeCCceeee-ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceee--------eec-cCCCCceEE
Confidence 0000 1223344555 455699999999999999997653210 000 112345789
Q ss_pred cccccCCCCcceeEeeccc
Q 009373 495 TEMSSKGGRTDQCSVAAKK 513 (536)
Q Consensus 495 ~~~~~~g~~~~~~~~~~~~ 513 (536)
++|+|+|..+++++.+.+.
T Consensus 497 v~fspdg~~las~s~d~~v 515 (611)
T 1nr0_A 497 VAFSNNGAFLVATDQSRKV 515 (611)
T ss_dssp EEECTTSSEEEEEETTSCE
T ss_pred EEECCCCCEEEEEcCCCCE
Confidence 9999999999998765443
No 16
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=311.73 Aligned_cols=280 Identities=18% Similarity=0.195 Sum_probs=221.5
Q ss_pred eeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCC-----------ceeeeeCCCCceEEEEe--cCCCEEEEEeCCC
Q 009373 154 LYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDG-----------FSIASSKPLGCTIRAVA--ADKKLLVAGGTDG 220 (536)
Q Consensus 154 l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~-----------~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg 220 (536)
...|...|.+++|+|||++|++++ |+++++||.... ........+...|.++. ++ +.|++|+.||
T Consensus 26 ~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~l~~~s~dg 103 (344)
T 4gqb_B 26 PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE-RGILVASDSG 103 (344)
T ss_dssp CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT-TEEEEEETTS
T ss_pred cccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC-CeEEEEECCC
Confidence 346778899999999999999888 778888873211 01111112334455554 65 5788999999
Q ss_pred cEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEE
Q 009373 221 FIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYG 297 (536)
Q Consensus 221 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~ 297 (536)
+|++||+.++... ........+|.+.|++++| ++++|++|+.|++|++||+.+++++..+. |...|.+
T Consensus 104 ~v~lWd~~~~~~~---------~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~ 174 (344)
T 4gqb_B 104 AVELWELDENETL---------IVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTC 174 (344)
T ss_dssp EEEEEEECTTSSC---------EEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred EEEEEeccCCCce---------eEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEE
Confidence 9999999876421 1223446689999999999 78899999999999999999999999988 9999999
Q ss_pred Ee--ecC-CEEEEec-CCcEEEEeCCCCcEEEEEcc-ccccceEEEEEeCC-CCEEEEEcCCCcEEEEEcccCccccccc
Q 009373 298 LA--PHD-TTVASTS-GSDVYIWDTNSGCLLTVVNG-AHVGNTKSLARSHT-GDFLFTGGEDGAIHMYEIINDCTEANVL 371 (536)
Q Consensus 298 ~~--~~~-~~l~~~~-d~~i~i~d~~~~~~~~~~~~-~~~~~i~~l~~~~~-~~~l~tg~~dg~i~iwd~~~~~~~~~~~ 371 (536)
+. +++ .++++++ |++|++||+++++....+.. .+...+.+++|+|+ +.+|++|+.||.|++||++++ .
T Consensus 175 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~------~ 248 (344)
T 4gqb_B 175 VAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST------S 248 (344)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--------
T ss_pred EEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC------c
Confidence 88 555 4777777 89999999999998887642 35567999999995 568899999999999999988 6
Q ss_pred eeeeccCCCCCeEEEEEcC---CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEec
Q 009373 372 LVATWIPHTGPVNSLAFEF---PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIG 448 (536)
Q Consensus 372 ~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 448 (536)
++..+.+|...|++++|+| .+|++|+.|++|+|||+++.+ ...+.+|...|.+++|+
T Consensus 249 ~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~--------------------~~~~~~H~~~V~~v~~s 308 (344)
T 4gqb_B 249 CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE--------------------LFRSQAHRDFVRDATWS 308 (344)
T ss_dssp CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE--------------------EEEECCCSSCEEEEEEC
T ss_pred EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc--------------------EEEEcCCCCCEEEEEEe
Confidence 7888999999999999986 479999999999999987631 12356888999999986
Q ss_pred CC---EEEEecCCCeEEEEeCCchh
Q 009373 449 AD---RIVCGGEEGIVRIWNFSQAF 470 (536)
Q Consensus 449 ~~---~l~sg~~Dg~i~vW~~~~~~ 470 (536)
++ +|+|||.||+|++|++++..
T Consensus 309 p~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 309 PLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp SSSTTEEEEEETTSCEEEEECCC--
T ss_pred CCCCeEEEEEcCCCeEEEEECCCCC
Confidence 53 68899999999999998754
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.4e-38 Score=307.32 Aligned_cols=292 Identities=19% Similarity=0.301 Sum_probs=226.6
Q ss_pred ceeeeeCccccEEEEEE-----ec-CCCEEEEEeCCCcEEEEECCCC-------ceeeeeCCCCceEEEEe--cCCCEEE
Q 009373 150 SIDVLYGHTEAVLTVFV-----LA-SAKLLFTSGYDSIVRMWHLEDG-------FSIASSKPLGCTIRAVA--ADKKLLV 214 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~-----~~-~~~~l~sgs~dg~v~iwd~~~~-------~~~~~~~~~~~~v~~~~--~~~~~l~ 214 (536)
...+|.||.+.|++++| ++ ++++|+||+.|++|++||+.++ .....+.+|...|.++. +++.+++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 46789999999999999 66 8999999999999999999753 45677889998887665 8899999
Q ss_pred EEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEee---
Q 009373 215 AGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVL--- 289 (536)
Q Consensus 215 sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~--- 289 (536)
+|+.|++|++||+.++. ....+.+|.+.|.+++| ++++|++++.|++|++||+.........
T Consensus 93 s~s~D~~v~lwd~~~~~-------------~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 159 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGT-------------TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKE 159 (343)
T ss_dssp EEETTSEEEEEETTSSC-------------EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTT
T ss_pred EEcCCCcEEEEECCCCc-------------EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeeccc
Confidence 99999999999997753 56678899999999999 6789999999999999999854433333
Q ss_pred eccccEEEEe--ecC----------CEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcE
Q 009373 290 RHSDWVYGLA--PHD----------TTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAI 356 (536)
Q Consensus 290 ~~~~~v~~~~--~~~----------~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i 356 (536)
.|...|.++. |++ .++++++ |+.|++||. ..+....+. +|...|++++|+|+|++|++|+.||.|
T Consensus 160 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs~dg~v 237 (343)
T 2xzm_R 160 NHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFK-AHESNVNHLSISPNGKYIATGGKDKKL 237 (343)
T ss_dssp SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred CCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEc-CccccceEEEECCCCCEEEEEcCCCeE
Confidence 3777888887 443 6788887 999999994 455666664 699999999999999999999999999
Q ss_pred EEEEcccCccccccceeeeccCCCCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccC--CCCCCCceeeEEeeCCCee
Q 009373 357 HMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF-PWLVSAAGDGKLSLIDVRKLLRSG--RPTSGKRVSRVIEVEPPQR 433 (536)
Q Consensus 357 ~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 433 (536)
++||+.... .....+ .+...|.+++|+| ..+++++.|+.|++||+.+..... ...... .....
T Consensus 238 ~iwd~~~~~-----~~~~~~-~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~--------~~~~~ 303 (343)
T 2xzm_R 238 LIWDILNLT-----YPQREF-DAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEP--------ITKAE 303 (343)
T ss_dssp EEEESSCCS-----SCSEEE-ECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCS--------GGGBT
T ss_pred EEEECCCCc-----ccceee-cCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCc--------chhhh
Confidence 999995442 122222 3456799999987 345556678899999998743221 000000 00001
Q ss_pred eeccccccEEEEEecC--CEEEEecCCCeEEEEeCCchh
Q 009373 434 MLHGFECNLLSVDIGA--DRIVCGGEEGIVRIWNFSQAF 470 (536)
Q Consensus 434 ~~~~~~~~v~~~~~~~--~~l~sg~~Dg~i~vW~~~~~~ 470 (536)
...+|...+.++++++ ++|++|+.||.|++|+++++.
T Consensus 304 ~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 304 GQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp TBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred hhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 1235667777777665 599999999999999998764
No 18
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2e-39 Score=314.54 Aligned_cols=286 Identities=20% Similarity=0.240 Sum_probs=221.2
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEeC------CCcEEEEECCCCceeee----eCCCCceEEEEe--cCCCEEEEEeC
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSGY------DSIVRMWHLEDGFSIAS----SKPLGCTIRAVA--ADKKLLVAGGT 218 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~------dg~v~iwd~~~~~~~~~----~~~~~~~v~~~~--~~~~~l~sg~~ 218 (536)
.....+|...|++++|+|||++|++|+. |+.|++|+..++..... ...|...|.++. |++ .+++++.
T Consensus 35 ~~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-~~l~~s~ 113 (357)
T 4g56_B 35 VTAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-GILVASD 113 (357)
T ss_dssp -----CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-EEEEEET
T ss_pred CCCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-CEEEEEC
Confidence 3445689999999999999999999997 78899999887754332 345666676655 665 5667889
Q ss_pred CCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccE
Q 009373 219 DGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWV 295 (536)
Q Consensus 219 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v 295 (536)
||+|++||+.++... ........+|.+.|.+++| ++++|++|+.|++|++||+++++.+..+. |...|
T Consensus 114 dg~v~lWd~~~~~~~---------~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v 184 (357)
T 4g56_B 114 SGAVELWEILEKESL---------LVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEV 184 (357)
T ss_dssp TSCEEEC-----------------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCEEEEeecccccee---------EEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE
Confidence 999999999876421 1233445689999999999 77899999999999999999999999887 89999
Q ss_pred EEEe--ecC-CEEEEec-CCcEEEEeCCCCcEEEEEc-cccccceEEEEEeCCC-CEEEEEcCCCcEEEEEcccCccccc
Q 009373 296 YGLA--PHD-TTVASTS-GSDVYIWDTNSGCLLTVVN-GAHVGNTKSLARSHTG-DFLFTGGEDGAIHMYEIINDCTEAN 369 (536)
Q Consensus 296 ~~~~--~~~-~~l~~~~-d~~i~i~d~~~~~~~~~~~-~~~~~~i~~l~~~~~~-~~l~tg~~dg~i~iwd~~~~~~~~~ 369 (536)
.+++ +++ .++++++ |+.|++||+++++....+. ..+...+++++|+|++ .+|++|+.|+.|++||++++
T Consensus 185 ~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~----- 259 (357)
T 4g56_B 185 NCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP----- 259 (357)
T ss_dssp EEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG-----
T ss_pred EEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCC-----
Confidence 9987 454 3566666 8999999999988776553 2467789999999975 68899999999999999988
Q ss_pred cceeeeccCCCCCeEEEEEcC---CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEE
Q 009373 370 VLLVATWIPHTGPVNSLAFEF---PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVD 446 (536)
Q Consensus 370 ~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 446 (536)
..+..+.+|...|++++|+| .+|++|+.||+|+|||+++.+. . ...+|...|.+++
T Consensus 260 -~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~-------------------~-~~~~H~~~V~~va 318 (357)
T 4g56_B 260 -DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV-------------------F-RDLSHRDFVTGVA 318 (357)
T ss_dssp -GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE-------------------E-EECCCSSCEEEEE
T ss_pred -cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE-------------------e-EECCCCCCEEEEE
Confidence 67788899999999999986 5799999999999999987421 1 1236888899998
Q ss_pred ecC---CEEEEecCCCeEEEEeCCchhhH
Q 009373 447 IGA---DRIVCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 447 ~~~---~~l~sg~~Dg~i~vW~~~~~~~~ 472 (536)
|++ .+|+|||.||+|++|++.+....
T Consensus 319 fsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 319 WSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 864 49999999999999999875443
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-38 Score=303.62 Aligned_cols=295 Identities=22% Similarity=0.296 Sum_probs=224.3
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCC--ceeeee-CC-CCceEEEEe--cCCCEEEEEeCCCcEE
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDG--FSIASS-KP-LGCTIRAVA--ADKKLLVAGGTDGFIH 223 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~--~~~~~~-~~-~~~~v~~~~--~~~~~l~sg~~dg~i~ 223 (536)
.++++.+|.++|++++|+|+ +|++|+.|++|++||+.++ .....+ .+ |...|.++. |++++|++|+.|++|+
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 83 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 57789999999999999987 9999999999999999875 345555 34 888776654 8999999999999999
Q ss_pred EEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCC----ceEeEeee-ccccEE
Q 009373 224 CWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRAL----LKCLKVLR-HSDWVY 296 (536)
Q Consensus 224 vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~----~~~~~~~~-~~~~v~ 296 (536)
+||+...... .........+.+|.+.|.+++| ++++|++|+.|++|++||+.. .+++..+. |...|.
T Consensus 84 iw~~~~~~~~------~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~ 157 (330)
T 2hes_X 84 IWAKEESADR------TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVK 157 (330)
T ss_dssp EEEC-------------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEE
T ss_pred EEEcccCcCc------cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceE
Confidence 9998543110 0112345667899999999999 678999999999999999943 24555665 889999
Q ss_pred EEe--ecCCEEEEec-CCcEEEEeCCCC--cEEEEEccccccceEEEEEeCC--CCEEEEEcCCCcEEEEEcccCccc--
Q 009373 297 GLA--PHDTTVASTS-GSDVYIWDTNSG--CLLTVVNGAHVGNTKSLARSHT--GDFLFTGGEDGAIHMYEIINDCTE-- 367 (536)
Q Consensus 297 ~~~--~~~~~l~~~~-d~~i~i~d~~~~--~~~~~~~~~~~~~i~~l~~~~~--~~~l~tg~~dg~i~iwd~~~~~~~-- 367 (536)
++. |++.+|++++ |++|++||..++ +++..+. +|.+.|.+++|+|+ +.+|++|+.|++|++||+......
T Consensus 158 ~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 158 HVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN-GHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ 236 (330)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSC
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc-CCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcccc
Confidence 987 8899999998 999999999876 5666664 79999999999998 678999999999999999765211
Q ss_pred cccceeeeccC-CCCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccc-cEEE
Q 009373 368 ANVLLVATWIP-HTGPVNSLAFEF-PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFEC-NLLS 444 (536)
Q Consensus 368 ~~~~~~~~~~~-h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~ 444 (536)
........+.+ |...|.+++|++ .+|++++.||.|++||..++.. ........+|.. .+.+
T Consensus 237 ~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~----------------~~~~~~~~~h~~~~v~~ 300 (330)
T 2hes_X 237 QEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEW----------------KVFAKRALCHGVYEINV 300 (330)
T ss_dssp EEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEE----------------EEEEEESCTTTTSCEEE
T ss_pred ceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCce----------------EEEeccccccccceEEE
Confidence 11123444554 999999999986 6899999999999999865310 000112245655 6777
Q ss_pred EEecC----CEEEEecCCCeEEEEeCCch
Q 009373 445 VDIGA----DRIVCGGEEGIVRIWNFSQA 469 (536)
Q Consensus 445 ~~~~~----~~l~sg~~Dg~i~vW~~~~~ 469 (536)
+++++ .+|+||+.||+|++|++.+.
T Consensus 301 v~~~~~~~~~~las~s~Dg~v~~W~~~~~ 329 (330)
T 2hes_X 301 VKWLELNGKTILATGGDDGIVNFWSLEKA 329 (330)
T ss_dssp EEEC-----CCEEEEETTSEEEEEEC---
T ss_pred EEEecCCCceEEEEecCCCcEEEEEeccC
Confidence 77654 58999999999999998753
No 20
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.4e-38 Score=302.29 Aligned_cols=289 Identities=21% Similarity=0.325 Sum_probs=230.5
Q ss_pred eeeeeCccccEEEEEEecC-CCEEEEEeCCCcEEEEECCCCc-----eeeeeCCCCceEEEEe--cCCCEEEEEeCCCcE
Q 009373 151 IDVLYGHTEAVLTVFVLAS-AKLLFTSGYDSIVRMWHLEDGF-----SIASSKPLGCTIRAVA--ADKKLLVAGGTDGFI 222 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~-~~~l~sgs~dg~v~iwd~~~~~-----~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i 222 (536)
..+|+||++.|++|+|+|+ +++|+|||.|++|+|||+.+++ +...+.+|...|.++. |++++|++|+.|+.|
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 4589999999999999997 6899999999999999987653 4667888988887665 899999999999999
Q ss_pred EEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee--ccccEEEE
Q 009373 223 HCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR--HSDWVYGL 298 (536)
Q Consensus 223 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~v~~~ 298 (536)
++|+..... .......+...+....+ ++..|++|+.|+.+++||........... |...+..+
T Consensus 111 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~ 177 (340)
T 4aow_A 111 RLWDLTTGT-------------TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCV 177 (340)
T ss_dssp EEEETTTTE-------------EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEE
T ss_pred eEEeecccc-------------eeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccce
Confidence 999986642 44455667777888877 67899999999999999998765544332 77788777
Q ss_pred e--e--cCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcccccccee
Q 009373 299 A--P--HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLV 373 (536)
Q Consensus 299 ~--~--~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~ 373 (536)
. + ...++++++ |+.|++||+++++.+..+. +|.+.|++++|+|++++|++|+.||.|++||+++. ..+
T Consensus 178 ~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~------~~~ 250 (340)
T 4aow_A 178 RFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG------KHL 250 (340)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT------EEE
T ss_pred EEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec-CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC------cee
Confidence 6 3 345667766 8999999999999998885 69999999999999999999999999999999988 555
Q ss_pred eeccCCCCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--
Q 009373 374 ATWIPHTGPVNSLAFEF-PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD-- 450 (536)
Q Consensus 374 ~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-- 450 (536)
..+.. ...|.++.|+| ..+++++.|+.|++||+++........ .........+|...|.+++++++
T Consensus 251 ~~~~~-~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~----------~~~~~~~~~~h~~~v~~l~~s~dg~ 319 (340)
T 4aow_A 251 YTLDG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK----------QEVISTSSKAEPPQCTSLAWSADGQ 319 (340)
T ss_dssp EEEEC-SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEEC----------CC-------CCCCCEEEEEECTTSS
T ss_pred eeecC-CceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEecc----------ccceeeeccCCCCCEEEEEECCCCC
Confidence 55554 46899999987 688888999999999998643221111 01122234577888888887654
Q ss_pred EEEEecCCCeEEEEeCCchh
Q 009373 451 RIVCGGEEGIVRIWNFSQAF 470 (536)
Q Consensus 451 ~l~sg~~Dg~i~vW~~~~~~ 470 (536)
+|++|+.||.|+|||+.+|.
T Consensus 320 ~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 320 TLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEETTSCEEEEEEEC--
T ss_pred EEEEEeCCCEEEEEeCCCcC
Confidence 99999999999999999885
No 21
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-37 Score=293.02 Aligned_cols=288 Identities=20% Similarity=0.320 Sum_probs=245.1
Q ss_pred CCccceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEE
Q 009373 146 LGRYSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIH 223 (536)
Q Consensus 146 ~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~ 223 (536)
.+....+++.+|.+.|++++| |++++|++|+.||.|++||+.+++....+..|...+.++. |++.+|++|+.||.|+
T Consensus 6 ~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 6 TGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp CCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred ccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEE
Confidence 344567899999999999999 9999999999999999999999988888888888776654 8999999999999999
Q ss_pred EEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--e
Q 009373 224 CWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--P 300 (536)
Q Consensus 224 vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~ 300 (536)
+|++.... .......+.+|...|.+++|+++.+++++.||.|++|| .++....+. |...+.++. +
T Consensus 85 ~~~~~~~~----------~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~ 152 (313)
T 3odt_A 85 GVPLFATS----------GEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVS 152 (313)
T ss_dssp EEETTCCT----------TSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEE
T ss_pred EEEeeecC----------CCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEcc
Confidence 99986642 22345667889999999999999999999999999999 566666666 888888877 4
Q ss_pred -cCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccC
Q 009373 301 -HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIP 378 (536)
Q Consensus 301 -~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 378 (536)
++..+++++ ++.|++|| .++....+...|...+.+++|+|++. +++|+.||.|++||++++ ..+..+.+
T Consensus 153 ~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~------~~~~~~~~ 223 (313)
T 3odt_A 153 FSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG------DVLRTYEG 223 (313)
T ss_dssp TTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC------CEEEEEEC
T ss_pred CCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch------hhhhhhhc
Confidence 788888888 89999999 55666677655999999999999988 999999999999999988 67788889
Q ss_pred CCCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC-EEEEec
Q 009373 379 HTGPVNSLAFEF-PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD-RIVCGG 456 (536)
Q Consensus 379 h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~sg~ 456 (536)
|...|++++|+| ..|++++.||.|++||+++. .....+..|...+.++.++++ .+++++
T Consensus 224 ~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~-------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 284 (313)
T 3odt_A 224 HESFVYCIKLLPNGDIVSCGEDRTVRIWSKENG-------------------SLKQVITLPAISIWSVDCMSNGDIIVGS 284 (313)
T ss_dssp CSSCEEEEEECTTSCEEEEETTSEEEEECTTTC-------------------CEEEEEECSSSCEEEEEECTTSCEEEEE
T ss_pred CCceEEEEEEecCCCEEEEecCCEEEEEECCCC-------------------ceeEEEeccCceEEEEEEccCCCEEEEe
Confidence 999999999987 48999999999999999874 233445667778888887766 577899
Q ss_pred CCCeEEEEeCCchhhHHH
Q 009373 457 EEGIVRIWNFSQAFEIER 474 (536)
Q Consensus 457 ~Dg~i~vW~~~~~~~~~~ 474 (536)
.||.|++|++.++.....
T Consensus 285 ~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 285 SDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp TTSCEEEEESCGGGCCC-
T ss_pred CCCcEEEEeCCCCceeeh
Confidence 999999999998765543
No 22
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-37 Score=307.39 Aligned_cols=249 Identities=23% Similarity=0.320 Sum_probs=222.3
Q ss_pred hhccccCCccceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEe
Q 009373 140 FRSKTFLGRYSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGG 217 (536)
Q Consensus 140 ~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~ 217 (536)
++.+........+++.+|.+.|++++|+|++++|++|+.|++|++||+.+++++..+.+|...|.++. |++++|++|+
T Consensus 132 i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s 211 (410)
T 1vyh_C 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS 211 (410)
T ss_dssp EEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEE
T ss_pred EEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 34444444456789999999999999999999999999999999999999999999999998887765 8899999999
Q ss_pred CCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-cccc
Q 009373 218 TDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDW 294 (536)
Q Consensus 218 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~ 294 (536)
.|++|++||+.++. ....+.+|...|.++.+ ++.+|++|+.|++|++||+.++++...+. |...
T Consensus 212 ~D~~i~~wd~~~~~-------------~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~ 278 (410)
T 1vyh_C 212 RDKTIKMWEVQTGY-------------CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHV 278 (410)
T ss_dssp TTSEEEEEETTTCC-------------EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC
T ss_pred CCCeEEEEECCCCc-------------EEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCce
Confidence 99999999997753 56678899999999999 67899999999999999999999888886 8888
Q ss_pred EEEEe--ec--------------------CCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEc
Q 009373 295 VYGLA--PH--------------------DTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGG 351 (536)
Q Consensus 295 v~~~~--~~--------------------~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~ 351 (536)
|.++. |+ +.++++++ |+.|++||+++++++..+. +|...|++++|+|++.+|++|+
T Consensus 279 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~-~h~~~v~~v~~~~~g~~l~s~s 357 (410)
T 1vyh_C 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCA 357 (410)
T ss_dssp EEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECSSSSCEEEEE
T ss_pred EEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE-CCCCcEEEEEEcCCCCEEEEEe
Confidence 99887 43 56888888 8999999999999998886 6999999999999999999999
Q ss_pred CCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECC
Q 009373 352 EDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVR 408 (536)
Q Consensus 352 ~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~ 408 (536)
.||.|++||+.++ .++..+.+|...|++++|+| .+|++|+.||+|++|+++
T Consensus 358 ~D~~i~vwd~~~~------~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 358 DDKTLRVWDYKNK------RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp TTTEEEEECCTTS------CCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CCCeEEEEECCCC------ceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 9999999999887 67788899999999999987 589999999999999864
No 23
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.4e-36 Score=301.61 Aligned_cols=292 Identities=21% Similarity=0.387 Sum_probs=253.1
Q ss_pred hhccccCCccceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCC
Q 009373 140 FRSKTFLGRYSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTD 219 (536)
Q Consensus 140 ~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~d 219 (536)
++.+.......+..+.+|.+.|.+++|+ ++++++|+.||+|++||+.+++.+..+.+|...+.++.++++.+++|+.|
T Consensus 141 i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~d 218 (445)
T 2ovr_B 141 LKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRD 218 (445)
T ss_dssp EEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETT
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCC
Confidence 4445544555678999999999999997 67999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEE
Q 009373 220 GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGL 298 (536)
Q Consensus 220 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~ 298 (536)
|+|++||+.++. ....+.+|...|.+++++++.+++|+.||.|++||+++++.+..+. |...|.++
T Consensus 219 g~i~~wd~~~~~-------------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 285 (445)
T 2ovr_B 219 ATLRVWDIETGQ-------------CLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 285 (445)
T ss_dssp SEEEEEESSSCC-------------EEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEE
T ss_pred CEEEEEECCCCc-------------EEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEE
Confidence 999999997653 5667789999999999999999999999999999999999998887 88999999
Q ss_pred eecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeecc
Q 009373 299 APHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWI 377 (536)
Q Consensus 299 ~~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~ 377 (536)
..++..+++++ |+.|++||+++++.+..+. +|...+.++.++ ++++++|+.||.|++||++++ ..+..+.
T Consensus 286 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~------~~~~~~~ 356 (445)
T 2ovr_B 286 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLT-GHQSLTSGMELK--DNILVSGNADSTVKIWDIKTG------QCLQTLQ 356 (445)
T ss_dssp EECSSEEEEEETTSCEEEEETTTCCEEEEEC-CCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTC------CEEEEEC
T ss_pred EECCCEEEEEeCCCeEEEEECCCCCEEEEEc-CCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCC------cEEEEEc
Confidence 99999999988 9999999999999998885 688899888774 679999999999999999887 4556665
Q ss_pred C---CCCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--EE
Q 009373 378 P---HTGPVNSLAFEFPWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RI 452 (536)
Q Consensus 378 ~---h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l 452 (536)
+ |...|++++|++++|++|+.||.|++||+.++.... .+... ...++...+.++.++++ ++
T Consensus 357 ~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~---------~~~~~-----~~~~~~~~v~~~~~s~~~~~l 422 (445)
T 2ovr_B 357 GPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIR---------NLVTL-----ESGGSGGVVWRIRASNTKLVC 422 (445)
T ss_dssp STTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE---------EEEEC-----TTGGGTCEEEEEEECSSEEEE
T ss_pred cCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceee---------eeecc-----ccCCCCceEEEEEecCCEEEE
Confidence 5 899999999999999999999999999998743221 11000 01457778888888776 88
Q ss_pred EEecCCCe----EEEEeCCch
Q 009373 453 VCGGEEGI----VRIWNFSQA 469 (536)
Q Consensus 453 ~sg~~Dg~----i~vW~~~~~ 469 (536)
++|+.||+ |.+||+...
T Consensus 423 a~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 423 AVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEECSSSSSCCEEEEEECCCC
T ss_pred EEcccCCCCccEEEEEECCCC
Confidence 99999998 999999864
No 24
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.9e-36 Score=313.95 Aligned_cols=306 Identities=23% Similarity=0.347 Sum_probs=256.7
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~ 227 (536)
.+..+.+|...|.+++|+|+++.|++++.|++|++||. +++.+..+.+|...+.++. |++..|++++.||+|++||.
T Consensus 254 ~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~ 332 (577)
T 2ymu_A 254 LLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 332 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 46788999999999999999999999999999999996 5678888899998887654 89999999999999999997
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecC
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHD 302 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~ 302 (536)
... ....+.+|...|.+++| ++..+++++.||.|++||. +++.+..+. |...|.+++ |++
T Consensus 333 ~~~--------------~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg 397 (577)
T 2ymu_A 333 NGQ--------------HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDG 397 (577)
T ss_dssp TSC--------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTS
T ss_pred CCC--------------eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCC
Confidence 543 44567789999999999 6789999999999999996 556666666 888999887 889
Q ss_pred CEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCC
Q 009373 303 TTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTG 381 (536)
Q Consensus 303 ~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~ 381 (536)
+++++++ |+.|++||. +++.+..+. +|...|++++|+|++++|++++.|+.|++||... ..+..+.+|..
T Consensus 398 ~~l~~~~~d~~v~~~~~-~~~~~~~~~-~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-------~~~~~~~~~~~ 468 (577)
T 2ymu_A 398 QTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-------QLLQTLTGHSS 468 (577)
T ss_dssp SCEEEEETTSEEEEECT-TCCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-------CEEEEEECCSS
T ss_pred CEEEEEeCCCEEEEEeC-CCCEEEEec-CCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-------CEEEEEcCCCC
Confidence 9999888 899999995 566777775 6999999999999999999999999999999643 46677889999
Q ss_pred CeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--EEEEecC
Q 009373 382 PVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RIVCGGE 457 (536)
Q Consensus 382 ~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~sg~~ 457 (536)
.|++++|+| .+|++++.|+.|++||... .....+.+|...|.+++++++ +|++|+.
T Consensus 469 ~v~~~~~spd~~~las~~~d~~i~iw~~~~--------------------~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 469 SVRGVAFSPDGQTIASASDDKTVKLWNRNG--------------------QLLQTLTGHSSSVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTS--------------------CEEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred CEEEEEEcCCCCEEEEEeCCCEEEEEcCCC--------------------CEEEEEeCCCCCEEEEEEcCCCCEEEEEEC
Confidence 999999986 7999999999999999542 223456778888888887654 9999999
Q ss_pred CCeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhhccccccCCCCcceeEeec
Q 009373 458 EGIVRIWNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQCSVAA 511 (536)
Q Consensus 458 Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 511 (536)
||.|++||.. ++.+.. +. .....+.+++|+|||+.+++++.+.
T Consensus 529 dg~v~lwd~~-~~~~~~----~~------~h~~~v~~~~fs~dg~~l~s~~~D~ 571 (577)
T 2ymu_A 529 DKTVKLWNRN-GQLLQT----LT------GHSSSVWGVAFSPDGQTIASASSDK 571 (577)
T ss_dssp TSEEEEECTT-SCEEEE----EE------CCSSCEEEEEECTTSSCEEEEETTS
T ss_pred cCEEEEEeCC-CCEEEE----Ec------CCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 9999999964 433221 11 1234567899999999999877644
No 25
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-37 Score=303.74 Aligned_cols=320 Identities=13% Similarity=0.146 Sum_probs=245.6
Q ss_pred eeeeCccccEEEEEEecCCC-EEEEEeCCCcEEEEEC----CCCc------eeeeeCC----------CCceEEEE--ec
Q 009373 152 DVLYGHTEAVLTVFVLASAK-LLFTSGYDSIVRMWHL----EDGF------SIASSKP----------LGCTIRAV--AA 208 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~~~-~l~sgs~dg~v~iwd~----~~~~------~~~~~~~----------~~~~v~~~--~~ 208 (536)
.....|.+.|++++|+|+++ +|++|+.||.|++|++ .+++ ....+.. |...|.++ +|
T Consensus 39 ~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 118 (425)
T 1r5m_A 39 LKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSH 118 (425)
T ss_dssp CEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECT
T ss_pred eeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcC
Confidence 33445669999999999999 9999999999999999 8887 3444433 55566655 58
Q ss_pred CCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEe
Q 009373 209 DKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCL 286 (536)
Q Consensus 209 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~ 286 (536)
++++|++|+.||.|++||. ++ .....+.+|...|.+++| ++++|++++.||.|++||+.+++.+
T Consensus 119 ~~~~l~~~~~dg~i~i~~~-~~-------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWNK-TG-------------ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp TSSEEEEEETTSCEEEEET-TS-------------CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred CCCEEEEEeCCCeEEEEeC-CC-------------CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence 9999999999999999993 22 256667889999999999 6789999999999999999999988
Q ss_pred Eeee-cccc---------------EEEEe--ecCCEEEEecCCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEE
Q 009373 287 KVLR-HSDW---------------VYGLA--PHDTTVASTSGSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLF 348 (536)
Q Consensus 287 ~~~~-~~~~---------------v~~~~--~~~~~l~~~~d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~ 348 (536)
..+. +... +.++. +++.+++++.++.|++||+.+++.+..+. +|...|.+++|+|++++|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~ 263 (425)
T 1r5m_A 185 QHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLI-GHHGPISVLEFNDTNKLLL 263 (425)
T ss_dssp EEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEEC-CCSSCEEEEEEETTTTEEE
T ss_pred EEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeec-cCCCceEEEEECCCCCEEE
Confidence 8876 3333 55555 55554444449999999999999888885 6999999999999999999
Q ss_pred EEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCC-eEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEe
Q 009373 349 TGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFP-WLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIE 427 (536)
Q Consensus 349 tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 427 (536)
+++.||.|++||+++. ..+..+.+|...|.+++|+|+ ++++++.||.|++||+++..
T Consensus 264 ~~~~d~~i~i~d~~~~------~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---------------- 321 (425)
T 1r5m_A 264 SASDDGTLRIWHGGNG------NSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNT---------------- 321 (425)
T ss_dssp EEETTSCEEEECSSSB------SCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTE----------------
T ss_pred EEcCCCEEEEEECCCC------ccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCc----------------
Confidence 9999999999999887 567777889999999999874 99999999999999998742
Q ss_pred eCCCeeeeccccccEEEEEecC--CEEEEecCCCeEEEEeCCchhhHHHHHHhhh----------cccchhHHHh--hhh
Q 009373 428 VEPPQRMLHGFECNLLSVDIGA--DRIVCGGEEGIVRIWNFSQAFEIERRARALR----------GIRLENRMRR--RKL 493 (536)
Q Consensus 428 ~~~~~~~~~~~~~~v~~~~~~~--~~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~----------~~~~~~~~~~--~~~ 493 (536)
....+..|...+.++.+++ ++|++|+.||.|++||+.++........... .......... .+.
T Consensus 322 ---~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 398 (425)
T 1r5m_A 322 ---LLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIF 398 (425)
T ss_dssp ---EEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEE
T ss_pred ---EeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceE
Confidence 2233455666777777664 5999999999999999988762211111000 1111111222 678
Q ss_pred ccccccCCCCcceeEeec
Q 009373 494 QTEMSSKGGRTDQCSVAA 511 (536)
Q Consensus 494 ~~~~~~~g~~~~~~~~~~ 511 (536)
.++|+|+|+.+++++.+.
T Consensus 399 ~~~~s~~~~~l~~~~~dg 416 (425)
T 1r5m_A 399 DLSWNCAGNKISVAYSLQ 416 (425)
T ss_dssp EEEECTTSSEEEEEESSS
T ss_pred EEEccCCCceEEEEecCc
Confidence 899999999998877543
No 26
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=287.24 Aligned_cols=238 Identities=21% Similarity=0.279 Sum_probs=217.1
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceE--EEEecCCCEEEEEeCCCcEEEEEcc
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTI--RAVAADKKLLVAGGTDGFIHCWRAV 228 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~l~sg~~dg~i~vwd~~ 228 (536)
...+.||...|.+++|+|++.++++|+.|++|++||+.+++.+..+..+...+ .+++|++++|++|+.||.|++|+++
T Consensus 73 ~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~ 152 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE 152 (321)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETT
T ss_pred eeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcC
Confidence 45789999999999999999999999999999999999999999887776655 5667999999999999999999997
Q ss_pred cCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecCC
Q 009373 229 EVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHDT 303 (536)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~~ 303 (536)
++. ....+..|...|.+++| ++++|++|+.||.|++||+.+++.+..+. |...|.+++ |+++
T Consensus 153 ~~~-------------~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~ 219 (321)
T 3ow8_A 153 SGK-------------KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 219 (321)
T ss_dssp TCS-------------EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSC
T ss_pred CCc-------------eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCC
Confidence 753 45567788999999999 77899999999999999999999998887 888888877 8899
Q ss_pred EEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCC
Q 009373 304 TVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGP 382 (536)
Q Consensus 304 ~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~ 382 (536)
+|++++ |+.|++||+++++....+. +|...|.+++|+|++.+|++|+.||+|++||+.++ .++.++.+|...
T Consensus 220 ~l~s~s~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~------~~~~~~~~h~~~ 292 (321)
T 3ow8_A 220 LLVTASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR------TCVHTFFDHQDQ 292 (321)
T ss_dssp EEEEECTTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT------EEEEEECCCSSC
T ss_pred EEEEEcCCCeEEEEECCCcceeEEEc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC------EEEEEEcCCCCc
Confidence 999998 8999999999999988885 69999999999999999999999999999999988 778889999999
Q ss_pred eEEEEEcC--CeEEEEeCCCcEEEEECC
Q 009373 383 VNSLAFEF--PWLVSAAGDGKLSLIDVR 408 (536)
Q Consensus 383 v~~l~~~~--~~l~s~s~dg~i~vwd~~ 408 (536)
|.+++|+| .+|++++.||.|++||..
T Consensus 293 v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 293 VWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999986 699999999999999963
No 27
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=8.4e-36 Score=315.48 Aligned_cols=297 Identities=18% Similarity=0.321 Sum_probs=225.8
Q ss_pred ceeeeeCccccEEEEEEecCC-CEEEEEeCCCcEEEEECCCC-----ceeeeeCCCCceEEEEe--cCCCEEEEEeCCCc
Q 009373 150 SIDVLYGHTEAVLTVFVLASA-KLLFTSGYDSIVRMWHLEDG-----FSIASSKPLGCTIRAVA--ADKKLLVAGGTDGF 221 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~dg~v~iwd~~~~-----~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~ 221 (536)
....+.+|++.|++++|+|++ ++|+||+.|++|++|++.+. .....+.+|...|.++. +++++|++|+.||+
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 346789999999999999874 79999999999999999764 34567788988887654 89999999999999
Q ss_pred EEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEee----eccccE
Q 009373 222 IHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVL----RHSDWV 295 (536)
Q Consensus 222 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~----~~~~~v 295 (536)
|++||+.++. ....+.+|.+.|.+++| +++.|++|+.|++|++||.......... .|...|
T Consensus 454 v~vwd~~~~~-------------~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v 520 (694)
T 3dm0_A 454 LRLWDLAAGV-------------STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWV 520 (694)
T ss_dssp EEEEETTTTE-------------EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCE
T ss_pred EEEEECCCCc-------------ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcE
Confidence 9999997653 55678899999999999 6789999999999999998765443332 277889
Q ss_pred EEEe--ecC--CEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcccccc
Q 009373 296 YGLA--PHD--TTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANV 370 (536)
Q Consensus 296 ~~~~--~~~--~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~ 370 (536)
.++. +++ ..+++++ |+.|++||+++++....+. +|.+.|++++|+|++++|++|+.||.|++||++++
T Consensus 521 ~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~------ 593 (694)
T 3dm0_A 521 SCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA-GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG------ 593 (694)
T ss_dssp EEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT------
T ss_pred EEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc-CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC------
Confidence 9887 444 4677777 9999999999999888885 69999999999999999999999999999999988
Q ss_pred ceeeeccCCCCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEe--
Q 009373 371 LLVATWIPHTGPVNSLAFEF-PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDI-- 447 (536)
Q Consensus 371 ~~~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-- 447 (536)
..+..+. +...|.+++|+| ..+++++.|+.|++||+++............................+...+.++.+
T Consensus 594 ~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sp 672 (694)
T 3dm0_A 594 KKLYSLE-ANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSA 672 (694)
T ss_dssp EEEECCB-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECT
T ss_pred ceEEEec-CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcC
Confidence 4555554 456899999987 455566667789999998754332211110000000000000001122233555555
Q ss_pred cCCEEEEecCCCeEEEEeCC
Q 009373 448 GADRIVCGGEEGIVRIWNFS 467 (536)
Q Consensus 448 ~~~~l~sg~~Dg~i~vW~~~ 467 (536)
++.+|++|+.||+|++|++.
T Consensus 673 dg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 673 DGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp TSSEEEEEETTSEEEEEEC-
T ss_pred CCCEEEEEcCCCeEEEEecc
Confidence 55699999999999999985
No 28
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.9e-36 Score=291.75 Aligned_cols=307 Identities=15% Similarity=0.188 Sum_probs=233.9
Q ss_pred ceeeeeCccccEEEEEEecCCC-EEEEEeC---CCcEEEEECCCCceeeee-CCCCceEEEEe--cC---CCEEEEEeCC
Q 009373 150 SIDVLYGHTEAVLTVFVLASAK-LLFTSGY---DSIVRMWHLEDGFSIASS-KPLGCTIRAVA--AD---KKLLVAGGTD 219 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~---dg~v~iwd~~~~~~~~~~-~~~~~~v~~~~--~~---~~~l~sg~~d 219 (536)
....+.+|.+.|++++|+|++. ++++|+. ||.|++||+.+++..... .+|...|.++. ++ +.+|++|+.|
T Consensus 10 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 10 IAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred hhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 3456788999999999999986 5556665 999999999998765443 36777777766 66 6999999999
Q ss_pred CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--------eCCEEEEEecCCeEEEEeCCCce-EeEeee
Q 009373 220 GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--------DLTRIYSGSWDMTVRVWDRALLK-CLKVLR 290 (536)
Q Consensus 220 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--------~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~ 290 (536)
|.|++||+.++. .....+.+|.+.|.++.| +++.|++++.||.|++||+.+++ ....+.
T Consensus 90 g~i~iwd~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~ 157 (357)
T 3i2n_A 90 GNLHIWNLEAPE------------MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANME 157 (357)
T ss_dssp SCEEEECTTSCS------------SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEEC
T ss_pred CeEEEEeCCCCC------------ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecc
Confidence 999999997652 245667899999999965 46799999999999999999886 566664
Q ss_pred -c----cccEEEEe------ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeC---CCCEEEEEcCCCc
Q 009373 291 -H----SDWVYGLA------PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSH---TGDFLFTGGEDGA 355 (536)
Q Consensus 291 -~----~~~v~~~~------~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~---~~~~l~tg~~dg~ 355 (536)
+ ...+.++. +++.++++++ ++.|++||+++++..... .|...|.+++|+| ++.+|++|+.||.
T Consensus 158 ~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 235 (357)
T 3i2n_A 158 PVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET--NIKNGVCSLEFDRKDISMNKLVATSLEGK 235 (357)
T ss_dssp CCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEESCSSSSCCEEEEEESTTE
T ss_pred ccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec--CCCCceEEEEcCCCCCCCCEEEEECCCCe
Confidence 2 33777776 7899999988 799999999999886654 5889999999999 9999999999999
Q ss_pred EEEEEcccCccccccceeeeccCCCCCeEEEEEcCC---eEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCe
Q 009373 356 IHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFP---WLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQ 432 (536)
Q Consensus 356 i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (536)
|++||+++....... ....+.+|...|++++|+|. +|++++.||.|++||+++.......................
T Consensus 236 i~i~d~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~ 314 (357)
T 3i2n_A 236 FHVFDMRTQHPTKGF-ASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLL 314 (357)
T ss_dssp EEEEEEEEEETTTEE-EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEE
T ss_pred EEEEeCcCCCcccce-eeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccccccee
Confidence 999999887322111 11234589999999999883 79999999999999998754432221111100000001233
Q ss_pred eeeccccccEEEEEecCC--EEE-EecCCCeEEEEeCCchhh
Q 009373 433 RMLHGFECNLLSVDIGAD--RIV-CGGEEGIVRIWNFSQAFE 471 (536)
Q Consensus 433 ~~~~~~~~~v~~~~~~~~--~l~-sg~~Dg~i~vW~~~~~~~ 471 (536)
..+.+|...|.+++++++ +|+ +|+.||.|++||+.+...
T Consensus 315 ~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 315 QNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred eccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 456778888888887765 676 899999999999987643
No 29
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.9e-36 Score=309.29 Aligned_cols=310 Identities=22% Similarity=0.351 Sum_probs=256.7
Q ss_pred cceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEE
Q 009373 149 YSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWR 226 (536)
Q Consensus 149 ~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd 226 (536)
..+..+.+|...|.+++|+|++.+|++++.|+.|++||. +++.+..+.+|...+.++. |++..+++++.|+.|++|+
T Consensus 212 ~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~ 290 (577)
T 2ymu_A 212 QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWN 290 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEe
Confidence 356788999999999999999999999999999999995 5778888999998887665 8999999999999999999
Q ss_pred cccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeeeccccEEEEe--ecC
Q 009373 227 AVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLRHSDWVYGLA--PHD 302 (536)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~--~~~ 302 (536)
... .....+.+|...|.+++| ++..+++++.|++|++||...........|...+.+++ |++
T Consensus 291 ~~~--------------~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g 356 (577)
T 2ymu_A 291 RNG--------------QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDG 356 (577)
T ss_dssp TTS--------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTS
T ss_pred CCC--------------cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCC
Confidence 643 245567899999999999 67899999999999999987665544444888888877 889
Q ss_pred CEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCC
Q 009373 303 TTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTG 381 (536)
Q Consensus 303 ~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~ 381 (536)
+++++++ ++.|++||. +++.+..+. +|...|++++|+|++++|++++.|+.|++||.. + ..+..+.+|..
T Consensus 357 ~~l~~~~~dg~v~~~~~-~~~~~~~~~-~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~------~~~~~~~~~~~ 427 (577)
T 2ymu_A 357 QTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G------QLLQTLTGHSS 427 (577)
T ss_dssp SEEEEEETTSEEEEEET-TCCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-C------CEEEEEECCSS
T ss_pred CEEEEEeCCCEEEEEcC-CCCEEEEec-CCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-C------CEEEEecCCCC
Confidence 9999988 899999995 566777775 699999999999999999999999999999953 3 45777889999
Q ss_pred CeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--EEEEecC
Q 009373 382 PVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RIVCGGE 457 (536)
Q Consensus 382 ~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~sg~~ 457 (536)
.|++++|+| .+|++++.|+.|++||... .....+.+|...+.+++++++ +|++++.
T Consensus 428 ~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~--------------------~~~~~~~~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 428 SVWGVAFSPDDQTIASASDDKTVKLWNRNG--------------------QLLQTLTGHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTS--------------------CEEEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred CeEEEEECCCCCEEEEEcCCCEEEEEECCC--------------------CEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 999999987 6999999999999999643 223345678888888777654 9999999
Q ss_pred CCeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhhccccccCCCCcceeEeeccc
Q 009373 458 EGIVRIWNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQCSVAAKK 513 (536)
Q Consensus 458 Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 513 (536)
|+.|++||.. +..+.. +.+ ....+.+++|+|+|+.+++++.+...
T Consensus 488 d~~i~iw~~~-~~~~~~----~~~------h~~~v~~l~~s~dg~~l~s~~~dg~v 532 (577)
T 2ymu_A 488 DKTVKLWNRN-GQLLQT----LTG------HSSSVRGVAFSPDGQTIASASDDKTV 532 (577)
T ss_dssp TSEEEEEETT-SCEEEE----EEC------CSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred CCEEEEEcCC-CCEEEE----EeC------CCCCEEEEEEcCCCCEEEEEECcCEE
Confidence 9999999964 333221 111 23456789999999999988765443
No 30
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.6e-36 Score=296.66 Aligned_cols=300 Identities=17% Similarity=0.117 Sum_probs=235.6
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCc------eeeeeCCCCceEEEEe--cC----C---CEEE
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGF------SIASSKPLGCTIRAVA--AD----K---KLLV 214 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~------~~~~~~~~~~~v~~~~--~~----~---~~l~ 214 (536)
....+.+|.+.|++++|+| ++|++|+.||+|++||+.+++ .+..+.+|...|.++. ++ + .+|+
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 3567889999999999998 899999999999999999987 7888888988887765 77 8 9999
Q ss_pred EEeCCCcEEEEEcccCccceecccCcccccceEEeeCC-----ccCEEEEEEe------CCE-EEEEecCCeEEEEeCCC
Q 009373 215 AGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEH-----EGPITSLALD------LTR-IYSGSWDMTVRVWDRAL 282 (536)
Q Consensus 215 sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~l~~~------~~~-l~s~s~dg~i~iwd~~~ 282 (536)
+++.||.|++|++.++.. ........+..| ...|.+++|. ++. |++++.||.|++||+.+
T Consensus 86 s~~~dg~i~iw~~~~~~~--------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 157 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDE--------TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHP 157 (397)
T ss_dssp EEETTSCEEEEEEEECTT--------TCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEES
T ss_pred EEcCCCCEEEEEccCCcc--------cccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCc
Confidence 999999999999977531 001115667778 5899999997 578 99999999999999988
Q ss_pred ------ceEeE-----eee--------ccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccc---c---ccc
Q 009373 283 ------LKCLK-----VLR--------HSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGA---H---VGN 334 (536)
Q Consensus 283 ------~~~~~-----~~~--------~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~---~---~~~ 334 (536)
++.+. .+. |...|.++. +++ ++++++ ++.|++||+++++.+..+. . | ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~h~~~~~~ 235 (397)
T 1sq9_A 158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFE-SQHSMINNSNS 235 (397)
T ss_dssp SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEE-CCC---CCCCC
T ss_pred cccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEe-ccccccccCCc
Confidence 66554 442 577788877 777 888888 8999999999999988885 5 7 899
Q ss_pred eEEEEEeCCCCEEEEEcCC---CcEEEEEcccCccccccceeeeccC-------------CCCCeEEEEEcC--CeEEEE
Q 009373 335 TKSLARSHTGDFLFTGGED---GAIHMYEIINDCTEANVLLVATWIP-------------HTGPVNSLAFEF--PWLVSA 396 (536)
Q Consensus 335 i~~l~~~~~~~~l~tg~~d---g~i~iwd~~~~~~~~~~~~~~~~~~-------------h~~~v~~l~~~~--~~l~s~ 396 (536)
|.+++|+|++.+|++++.| |.|++||++++ ..+..+.+ |...|.+++|+| .+|+++
T Consensus 236 i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 309 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG------ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA 309 (397)
T ss_dssp EEEEEECSSTTEEEEEEEETTEEEEEEEETTTC------CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEE
T ss_pred cceEEECCCCCEEEEEecCCCCceEEEEECCCC------cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEE
Confidence 9999999999999999999 99999999987 56777777 999999999986 799999
Q ss_pred eCCCcEEEEECCcccccCCCCCCCceeeEEee-----CCCeeeeccccccEEEEEecCC------------EEEEecCCC
Q 009373 397 AGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEV-----EPPQRMLHGFECNLLSVDIGAD------------RIVCGGEEG 459 (536)
Q Consensus 397 s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~------------~l~sg~~Dg 459 (536)
+.||.|++||+++.............. .. .........|...|.++.++++ +|++|+.||
T Consensus 310 ~~dg~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg 386 (397)
T 1sq9_A 310 GWDGKLRFWDVKTKERITTLNMHCDDI---EIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDR 386 (397)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCGGGC---SSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTT
T ss_pred eCCCeEEEEEcCCCceeEEEecccCcc---cchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCC
Confidence 999999999998753322111000000 00 0000001123667777776554 899999999
Q ss_pred eEEEEeCCchh
Q 009373 460 IVRIWNFSQAF 470 (536)
Q Consensus 460 ~i~vW~~~~~~ 470 (536)
.|++|++.+|+
T Consensus 387 ~i~iw~~~~g~ 397 (397)
T 1sq9_A 387 SIRWFREAGGK 397 (397)
T ss_dssp EEEEEEEEC--
T ss_pred cEEEEEcCCCC
Confidence 99999998763
No 31
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.6e-36 Score=288.63 Aligned_cols=237 Identities=16% Similarity=0.150 Sum_probs=200.0
Q ss_pred eeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeee----eCCCCceEEEEe--cCCCEEEEEeCCCcEEEE
Q 009373 152 DVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIAS----SKPLGCTIRAVA--ADKKLLVAGGTDGFIHCW 225 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~----~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vw 225 (536)
.....|..+|.+++|+|++ .|++|+.||+|+|||+.+++.+.. ..+|...|.++. |++++|++|+.||+|++|
T Consensus 76 ~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iw 154 (344)
T 4gqb_B 76 SAGVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVW 154 (344)
T ss_dssp SEEEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeeeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 3445678899999999975 688999999999999999876543 357888887665 899999999999999999
Q ss_pred EcccCccceecccCcccccceEEeeCCccCEEEEEE--eC-CEEEEEecCCeEEEEeCCCceEeEeee---ccccEEEEe
Q 009373 226 RAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DL-TRIYSGSWDMTVRVWDRALLKCLKVLR---HSDWVYGLA 299 (536)
Q Consensus 226 d~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~ 299 (536)
|+.++. ....+.+|.+.|.+++| ++ ..|++|+.|++|++||+++++....+. +...+.++.
T Consensus 155 d~~~~~-------------~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 221 (344)
T 4gqb_B 155 DLAQQV-------------VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLA 221 (344)
T ss_dssp ETTTTE-------------EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEE
T ss_pred ECCCCc-------------EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeee
Confidence 997753 66778899999999999 34 578999999999999999999888775 555677776
Q ss_pred --e-cCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCC-CEEEEEcCCCcEEEEEcccCccccccceee
Q 009373 300 --P-HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTG-DFLFTGGEDGAIHMYEIINDCTEANVLLVA 374 (536)
Q Consensus 300 --~-~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~ 374 (536)
+ +++++++++ |+.|++||+++++++..+. +|...|++++|+|++ .+|++|+.||+|+|||+.++ . +.
T Consensus 222 ~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~------~-~~ 293 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA-VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS------E-LF 293 (344)
T ss_dssp ECSSCTTEEEEEETTSEEEEEESCC--CCEEEE-CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC------E-EE
T ss_pred ecCCCCcceEEeccCCcEEEEECCCCcEEEEEc-CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC------c-EE
Confidence 4 466888877 8999999999999999886 699999999999998 57999999999999999877 3 34
Q ss_pred eccCCCCCeEEEEEcC---CeEEEEeCCCcEEEEECCcc
Q 009373 375 TWIPHTGPVNSLAFEF---PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 375 ~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~ 410 (536)
.+.+|.+.|++++|+| .+|++++.||+|++|++.+.
T Consensus 294 ~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 294 RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 5689999999999986 46789999999999999763
No 32
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=7.5e-36 Score=291.59 Aligned_cols=302 Identities=15% Similarity=0.119 Sum_probs=237.7
Q ss_pred eeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCc--eeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEcc
Q 009373 153 VLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGF--SIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRAV 228 (536)
Q Consensus 153 ~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~~ 228 (536)
.+..|.++|++++|+|++++|++|+.|+.|++||+.+++ .+..+.+|...|.++. +++++|++++.||.|++||+.
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 456699999999999999999999999999999999987 8888888988887665 889999999999999999997
Q ss_pred cCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceE---eEeee--ccccEEEEe--
Q 009373 229 EVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKC---LKVLR--HSDWVYGLA-- 299 (536)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~---~~~~~--~~~~v~~~~-- 299 (536)
++. ......+..|...|.+++| ++++|++++.||.|++||+..++. ...+. |...|.++.
T Consensus 83 ~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~ 151 (372)
T 1k8k_C 83 GRT-----------WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWH 151 (372)
T ss_dssp TTE-----------EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEEC
T ss_pred CCe-----------eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEc
Confidence 653 1234445679999999999 678999999999999999987763 23332 788899887
Q ss_pred ecCCEEEEec-CCcEEEEeC------------------CCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEE
Q 009373 300 PHDTTVASTS-GSDVYIWDT------------------NSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYE 360 (536)
Q Consensus 300 ~~~~~l~~~~-d~~i~i~d~------------------~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd 360 (536)
+++.++++++ |+.|++||+ ..++.+..+. +|...|.+++|+|++++|++++.||.|++||
T Consensus 152 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 230 (372)
T 1k8k_C 152 PNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVSHDSTVCLAD 230 (372)
T ss_dssp TTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred CCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 7888999888 899999995 4677777775 6999999999999999999999999999999
Q ss_pred cccCccccccceeeeccCCCCCeEEEEEcC-CeEEEEeCCCcEEEEECCc--cc--ccCCCCCCCc--------eeeE--
Q 009373 361 IINDCTEANVLLVATWIPHTGPVNSLAFEF-PWLVSAAGDGKLSLIDVRK--LL--RSGRPTSGKR--------VSRV-- 425 (536)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~--~~--~~~~~~~~~~--------~~~~-- 425 (536)
++++ ..+..+..|..+|.+++|+| ..+++++.|+.|++||+.+ +. .......... ...+
T Consensus 231 ~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (372)
T 1k8k_C 231 ADKK------MAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQN 304 (372)
T ss_dssp GGGT------TEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHH
T ss_pred CCCC------ceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhh
Confidence 9988 67788889999999999986 3444444999999999987 31 0000000000 0000
Q ss_pred -EeeCCC-------eeeeccccccEEEEEe---cC---CEEEEecCCCeEEEEeCCchhhH
Q 009373 426 -IEVEPP-------QRMLHGFECNLLSVDI---GA---DRIVCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 426 -~~~~~~-------~~~~~~~~~~v~~~~~---~~---~~l~sg~~Dg~i~vW~~~~~~~~ 472 (536)
...... .....+|...|.++++ ++ .+|+||+.||.|++|++.+++.+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 305 LDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESA 365 (372)
T ss_dssp CCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHHH
T ss_pred cccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhHh
Confidence 000000 1223488888988873 33 79999999999999999876543
No 33
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.7e-36 Score=284.38 Aligned_cols=266 Identities=16% Similarity=0.199 Sum_probs=218.2
Q ss_pred eeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEE
Q 009373 192 SIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIY 267 (536)
Q Consensus 192 ~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~ 267 (536)
..+++.+|...|.++. |++.+|++|+.||+|++||+.++. ....+..|..+|.+++| ++++|+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~l~ 71 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV-------------EVRSIQVTETPVRAGKFIARKNWII 71 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-------------EEEEEECCSSCEEEEEEEGGGTEEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc-------------eeEEeeccCCcEEEEEEeCCCCEEE
Confidence 4556777888776654 999999999999999999997653 56678889999999999 788999
Q ss_pred EEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeC-
Q 009373 268 SGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSH- 342 (536)
Q Consensus 268 s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~- 342 (536)
+|+.|++|++||+.+++.+..+. |...|.+++ |++.++++++ |++|++||++++..+.....+|...|.+++|+|
T Consensus 72 s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 72 VGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK 151 (304)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTT
T ss_pred EECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCC
Confidence 99999999999999999998887 999999987 8899999988 899999999988555444357999999999999
Q ss_pred CCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC----CeEEEEeCCCcEEEEECCcccccCCCCC
Q 009373 343 TGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF----PWLVSAAGDGKLSLIDVRKLLRSGRPTS 418 (536)
Q Consensus 343 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~----~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 418 (536)
++.+|++|+.||+|++||++.... ......+|...|..+.|.+ .+|++|+.|++|++||+++.
T Consensus 152 ~~~~l~sgs~D~~v~iwd~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~-------- 218 (304)
T 2ynn_A 152 DPSTFASGCLDRTVKVWSLGQSTP-----NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK-------- 218 (304)
T ss_dssp CTTEEEEEETTSEEEEEETTCSSC-----SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT--------
T ss_pred CCCEEEEEeCCCeEEEEECCCCCc-----cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC--------
Confidence 678999999999999999987631 2222346778899999964 58999999999999999873
Q ss_pred CCceeeEEeeCCCeeeeccccccEEEEEecCC--EEEEecCCCeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhhccc
Q 009373 419 GKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLENRMRRRKLQTE 496 (536)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (536)
.....+.+|...|.++.++++ +|++|+.||+|++||+.+++.+..... ......+++
T Consensus 219 -----------~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~----------~~~~~~~~~ 277 (304)
T 2ynn_A 219 -----------SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV----------GLERSWCIA 277 (304)
T ss_dssp -----------EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC----------SSSSEEEEE
T ss_pred -----------ccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccC----------CCccEEEEE
Confidence 233456788888888877665 899999999999999998765543211 123356889
Q ss_pred cccCCCCc
Q 009373 497 MSSKGGRT 504 (536)
Q Consensus 497 ~~~~g~~~ 504 (536)
++|+|+..
T Consensus 278 ~~~~~~~~ 285 (304)
T 2ynn_A 278 THPTGRKN 285 (304)
T ss_dssp ECTTCGGG
T ss_pred ECCCCCce
Confidence 89998754
No 34
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-35 Score=284.21 Aligned_cols=282 Identities=14% Similarity=0.171 Sum_probs=237.5
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~ 227 (536)
....+.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.++. +++++|++++.||.|++||+
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 4578999999999999999999999999999999999999999999999999887765 78999999999999999999
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecC-----CeEEEEeCCCceEe-----------Eee
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWD-----MTVRVWDRALLKCL-----------KVL 289 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~d-----g~i~iwd~~~~~~~-----------~~~ 289 (536)
.++. ....+. |...|.+++| ++..+++++.+ |.|++||+.+.... ..+
T Consensus 104 ~~~~-------------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 104 SNGQ-------------CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp TTCC-------------EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred CCCc-------------EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 7753 333443 8889999999 77899999999 99999998765422 122
Q ss_pred e-ccc--cEEEEe--ecCCEEEEec-CCcEEEEeCCC-CcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcc
Q 009373 290 R-HSD--WVYGLA--PHDTTVASTS-GSDVYIWDTNS-GCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEII 362 (536)
Q Consensus 290 ~-~~~--~v~~~~--~~~~~l~~~~-d~~i~i~d~~~-~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~ 362 (536)
. +.. .+.++. ++++++++++ ++.|++||+++ ++.+..+. .|...|.+++|+|++.+|++++.||.|++||++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID-LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred cCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe-cCCCceeEEEECCCCCEEEEecCCceEEEEECC
Confidence 2 333 677766 8888998888 89999999999 67777775 699999999999999999999999999999999
Q ss_pred cCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCC--------------cEEEEECCcccccCCCCCCCceeeEE
Q 009373 363 NDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDG--------------KLSLIDVRKLLRSGRPTSGKRVSRVI 426 (536)
Q Consensus 363 ~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg--------------~i~vwd~~~~~~~~~~~~~~~~~~~~ 426 (536)
+. ..+..+. +...+.+++|+| .++++++.++ .+++||+.+.
T Consensus 249 ~~------~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~---------------- 305 (369)
T 3zwl_B 249 TL------QVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE---------------- 305 (369)
T ss_dssp TC------CEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC----------------
T ss_pred CC------ceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC----------------
Confidence 87 4455544 788999999986 7999999988 7999998773
Q ss_pred eeCCCeeeeccccccEEEEEecCC--EEEEecCCCeEEEEeCCchhhH
Q 009373 427 EVEPPQRMLHGFECNLLSVDIGAD--RIVCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 427 ~~~~~~~~~~~~~~~v~~~~~~~~--~l~sg~~Dg~i~vW~~~~~~~~ 472 (536)
.....+.+|...|.++.++++ +|++|+.||.|++|++.++...
T Consensus 306 ---~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 350 (369)
T 3zwl_B 306 ---EEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFD 350 (369)
T ss_dssp ---CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHT
T ss_pred ---cchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccch
Confidence 333456778888888887654 9999999999999999987543
No 35
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-34 Score=279.09 Aligned_cols=274 Identities=20% Similarity=0.272 Sum_probs=230.8
Q ss_pred eeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceee---ee--CCCCceEEEEe--cCCCEEEEEeCCCcEEE
Q 009373 152 DVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIA---SS--KPLGCTIRAVA--ADKKLLVAGGTDGFIHC 224 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~---~~--~~~~~~v~~~~--~~~~~l~sg~~dg~i~v 224 (536)
....+|.+.|++++|+|++++|++++ ||.|++||+.++.... .+ .+|...+.++. |++++|++++.||.|++
T Consensus 45 ~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 45 INTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp EEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred ceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 34458999999999999999999999 9999999998875332 22 26777776655 88999999999999999
Q ss_pred EEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--
Q 009373 225 WRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA-- 299 (536)
Q Consensus 225 wd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~-- 299 (536)
||+.++. ......+..|...|.+++| +++.+++++.||.|++||+++++....+. |...+.++.
T Consensus 124 ~d~~~~~-----------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~ 192 (337)
T 1gxr_A 124 WDLAAPT-----------PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192 (337)
T ss_dssp EECCCC-------------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EECCCCC-----------cceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEEC
Confidence 9997653 2245567789999999999 67899999999999999999999888887 888999887
Q ss_pred ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccC
Q 009373 300 PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIP 378 (536)
Q Consensus 300 ~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 378 (536)
|+++++++++ ++.|++||+++++.+..+. +...+.+++|+|++++|++++.||.|++||+++.. ...+..
T Consensus 193 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~-------~~~~~~ 263 (337)
T 1gxr_A 193 NDGTKLWTGGLDNTVRSWDLREGRQLQQHD--FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD-------KYQLHL 263 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC-------EEEECC
T ss_pred CCCCEEEEEecCCcEEEEECCCCceEeeec--CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC-------eEEEcC
Confidence 7888999888 8999999999999888874 78899999999999999999999999999998872 345678
Q ss_pred CCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEec--CCEEEE
Q 009373 379 HTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIG--ADRIVC 454 (536)
Q Consensus 379 h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s 454 (536)
|...|.+++|+| .+|++++.||.|++||+.+.... ....|...+.++.++ +++|++
T Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~--------------------~~~~~~~~v~~~~~s~~~~~l~~ 323 (337)
T 1gxr_A 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI--------------------FQSKESSSVLSCDISVDDKYIVT 323 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE--------------------EEEECSSCEEEEEECTTSCEEEE
T ss_pred CccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE--------------------EEecCCCcEEEEEECCCCCEEEE
Confidence 999999999986 79999999999999999874221 112345566666665 459999
Q ss_pred ecCCCeEEEEeC
Q 009373 455 GGEEGIVRIWNF 466 (536)
Q Consensus 455 g~~Dg~i~vW~~ 466 (536)
++.||.|++|++
T Consensus 324 ~~~dg~i~iw~~ 335 (337)
T 1gxr_A 324 GSGDKKATVYEV 335 (337)
T ss_dssp EETTSCEEEEEE
T ss_pred ecCCCeEEEEEE
Confidence 999999999996
No 36
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.2e-36 Score=297.36 Aligned_cols=307 Identities=16% Similarity=0.113 Sum_probs=238.7
Q ss_pred ccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEE-EEecCCCEEEEEeCCCcEEEEEcccCccceecc
Q 009373 159 EAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIR-AVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDI 237 (536)
Q Consensus 159 ~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~-~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 237 (536)
..+++++|+|++++|++|+.||.|++||+.+++....+..+..... .+.+++++|++|+.||.|++||+.++.
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------ 130 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL------ 130 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCE------
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcc------
Confidence 3455899999999999999999999999998887777766644333 456899999999999999999987642
Q ss_pred cCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecCCEEEEec-CC
Q 009373 238 SGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHDTTVASTS-GS 311 (536)
Q Consensus 238 ~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~~~l~~~~-d~ 311 (536)
....+.+|.+.|.+++| ++++|++|+.|++|++||+.+++.+..+. |...|.+++ |++.++++++ |+
T Consensus 131 -------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~ 203 (420)
T 3vl1_A 131 -------QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDG 203 (420)
T ss_dssp -------EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTS
T ss_pred -------eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 44455789999999999 67899999999999999999999888887 899999887 7899999888 89
Q ss_pred cEEEEeCCCCcEEEEEcc--ccccceEEE---------------------EEeCCCCEEEEEcCCCcEEEEEcccCcccc
Q 009373 312 DVYIWDTNSGCLLTVVNG--AHVGNTKSL---------------------ARSHTGDFLFTGGEDGAIHMYEIINDCTEA 368 (536)
Q Consensus 312 ~i~i~d~~~~~~~~~~~~--~~~~~i~~l---------------------~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~ 368 (536)
.|++||+++++.+..+.. .+...+.++ +|+|++++|++|+.||.|++||++++.
T Consensus 204 ~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~--- 280 (420)
T 3vl1_A 204 TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE--- 280 (420)
T ss_dssp CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC---
T ss_pred cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc---
Confidence 999999999999888753 234444444 457889999999999999999998873
Q ss_pred ccceeeeccCCCCCeEEEEEcCC---eEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeecc-ccccEEE
Q 009373 369 NVLLVATWIPHTGPVNSLAFEFP---WLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHG-FECNLLS 444 (536)
Q Consensus 369 ~~~~~~~~~~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~ 444 (536)
.......+|...|++++|+|+ +|++|+.||.|++||+++... +...+.+ |...+.+
T Consensus 281 --~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~------------------~~~~~~~~~~~~v~~ 340 (420)
T 3vl1_A 281 --QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC------------------PVGEFLINEGTPINN 340 (420)
T ss_dssp --EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS------------------CSEEEEESTTSCEEE
T ss_pred --eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC------------------chhhhhccCCCCceE
Confidence 223334568999999999873 999999999999999987522 1222333 5556666
Q ss_pred EEec-CCEEEEecCCCeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhhccccccCCC
Q 009373 445 VDIG-ADRIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSSKGG 502 (536)
Q Consensus 445 ~~~~-~~~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 502 (536)
+.+. +.+|++++.||.|++|++..+......... ...............++|+|+|.
T Consensus 341 ~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~ 398 (420)
T 3vl1_A 341 VYFAAGALFVSSGFDTSIKLDIISDPESERPAIEF-ETPTFLVSNDDAVSQFCYVSDDE 398 (420)
T ss_dssp EEEETTEEEEEETTTEEEEEEEECCTTCCSCEECT-TSCEEECCSSCCCCEEEEECCSS
T ss_pred EEeCCCCEEEEecCCccEEEEeccCCCCCccceec-cCccEEccCCcceEEEEEccCCC
Confidence 6544 449999999999999999875332211111 11111122334567889999998
No 37
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.2e-35 Score=281.34 Aligned_cols=240 Identities=17% Similarity=0.226 Sum_probs=211.2
Q ss_pred ccceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCC----ceeeeeCCCCceEEEEe-cCCCEEEEEeCCCcE
Q 009373 148 RYSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDG----FSIASSKPLGCTIRAVA-ADKKLLVAGGTDGFI 222 (536)
Q Consensus 148 ~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~-~~~~~l~sg~~dg~i 222 (536)
...+..+.+|...|.+++|+|++++|++|+.|+.|++|++.++ .....+.+|...+.++. .++..+++++.|++|
T Consensus 87 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i 166 (340)
T 1got_B 87 TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTC 166 (340)
T ss_dssp CCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCE
T ss_pred CCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcE
Confidence 3457788999999999999999999999999999999999876 34566788988887776 334469999999999
Q ss_pred EEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe
Q 009373 223 HCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA 299 (536)
Q Consensus 223 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~ 299 (536)
++||+.++. ....+.+|.+.|.+++| ++.++++|+.||+|++||++++++...+. |...|.+++
T Consensus 167 ~~wd~~~~~-------------~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~ 233 (340)
T 1got_B 167 ALWDIETGQ-------------QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233 (340)
T ss_dssp EEEETTTTE-------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEE
T ss_pred EEEECCCCc-------------EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEE
Confidence 999997753 56678899999999999 66799999999999999999999988887 888999887
Q ss_pred --ecCCEEEEec-CCcEEEEeCCCCcEEEEEcc-ccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeee
Q 009373 300 --PHDTTVASTS-GSDVYIWDTNSGCLLTVVNG-AHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVAT 375 (536)
Q Consensus 300 --~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~ 375 (536)
|++.++++++ |++|++||+++++.+..+.. .+...|++++|+|+|++|++|+.||.|++||+.+. ..+..
T Consensus 234 ~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~------~~~~~ 307 (340)
T 1got_B 234 FFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA------DRAGV 307 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC------CEEEE
T ss_pred EcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC------cEeeE
Confidence 8899999998 89999999999988877642 23357999999999999999999999999999887 56778
Q ss_pred ccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEE
Q 009373 376 WIPHTGPVNSLAFEF--PWLVSAAGDGKLSLID 406 (536)
Q Consensus 376 ~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd 406 (536)
+.+|.++|.+++|+| .+|++|+.||.|++||
T Consensus 308 ~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 308 LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred eecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 899999999999986 6999999999999997
No 38
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-36 Score=299.81 Aligned_cols=320 Identities=14% Similarity=0.134 Sum_probs=247.6
Q ss_pred ccccEEEEEEecCCC-EEEEE----------eCCCcEEEEECCCCce---eeeeCCCCceEEEE--ecCCCEEEEEeCCC
Q 009373 157 HTEAVLTVFVLASAK-LLFTS----------GYDSIVRMWHLEDGFS---IASSKPLGCTIRAV--AADKKLLVAGGTDG 220 (536)
Q Consensus 157 h~~~V~~v~~~~~~~-~l~sg----------s~dg~v~iwd~~~~~~---~~~~~~~~~~v~~~--~~~~~~l~sg~~dg 220 (536)
+...|.+++|+|++. +|++| +.|+.|++||+.++.. +..+ .|...+.++ ++++.+|++|+.||
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCC
Confidence 446789999999987 99999 8999999999998863 3333 466666655 48999999999999
Q ss_pred cEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--e-CCEEEEEecCCeEEEEeCCCce------EeEee--
Q 009373 221 FIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--D-LTRIYSGSWDMTVRVWDRALLK------CLKVL-- 289 (536)
Q Consensus 221 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~-~~~l~s~s~dg~i~iwd~~~~~------~~~~~-- 289 (536)
.|++||+.+.. ........+.+|.+.|.+++| + +++|++++.||.|++||+.+++ ....+
T Consensus 90 ~v~vw~~~~~~---------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 160 (416)
T 2pm9_A 90 SLELYSTNEAN---------NAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQ 160 (416)
T ss_dssp CEEEECCSSTT---------SCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCC
T ss_pred eEEEeeccccc---------ccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccc
Confidence 99999997621 012356677889999999999 3 6799999999999999999876 33333
Q ss_pred --eccccEEEEe--ec-CCEEEEec-CCcEEEEeCCCCcEEEEEcccc-----ccceEEEEEeCCC-CEEEEEcCCC---
Q 009373 290 --RHSDWVYGLA--PH-DTTVASTS-GSDVYIWDTNSGCLLTVVNGAH-----VGNTKSLARSHTG-DFLFTGGEDG--- 354 (536)
Q Consensus 290 --~~~~~v~~~~--~~-~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~-----~~~i~~l~~~~~~-~~l~tg~~dg--- 354 (536)
.|...|.+++ ++ +.++++++ |+.|++||+++++.+..+...+ ...|.+++|+|++ .++++++.|+
T Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~ 240 (416)
T 2pm9_A 161 SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDP 240 (416)
T ss_dssp SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSC
T ss_pred ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCc
Confidence 3788888887 65 67888888 8999999999999988886321 7899999999997 6899999999
Q ss_pred cEEEEEcccCccccccceeeecc-CCCCCeEEEEEcC---CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCC
Q 009373 355 AIHMYEIINDCTEANVLLVATWI-PHTGPVNSLAFEF---PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEP 430 (536)
Q Consensus 355 ~i~iwd~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 430 (536)
.|++||+++.. .++..+. +|...|++++|+| .+|++++.||.|++||+++. .
T Consensus 241 ~i~~~d~~~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~-------------------~ 296 (416)
T 2pm9_A 241 SILIWDLRNAN-----TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA-------------------E 296 (416)
T ss_dssp CCCEEETTSTT-----SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC-------------------C
T ss_pred eEEEEeCCCCC-----CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC-------------------c
Confidence 99999998863 3556677 8999999999975 69999999999999999874 2
Q ss_pred CeeeeccccccEEEEEecC---CEEEEecCCCeEEEEeCCchhhHHHHHH-----hhh--------------------cc
Q 009373 431 PQRMLHGFECNLLSVDIGA---DRIVCGGEEGIVRIWNFSQAFEIERRAR-----ALR--------------------GI 482 (536)
Q Consensus 431 ~~~~~~~~~~~v~~~~~~~---~~l~sg~~Dg~i~vW~~~~~~~~~~~~~-----~~~--------------------~~ 482 (536)
....+.+|...+.++.+++ .+|++++.||.|++|++.++........ ... ..
T Consensus 297 ~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (416)
T 2pm9_A 297 QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHL 376 (416)
T ss_dssp EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCC
T ss_pred cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccc
Confidence 2334556777776666654 5999999999999999998664322110 000 00
Q ss_pred cchhHHHhhhhccccccCCCCcceeEee
Q 009373 483 RLENRMRRRKLQTEMSSKGGRTDQCSVA 510 (536)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 510 (536)
.......+....++|+|+|+.+++++.+
T Consensus 377 ~~~~~~~~~~~~~~~s~dg~~la~~~~d 404 (416)
T 2pm9_A 377 QAPTWYGEPSPAAHWAFGGKLVQITPDG 404 (416)
T ss_dssp CCCSTTCCCSCCCEEETTTEEECBCTTS
T ss_pred cCCccccCCccceEEeeCCeEEEEeCCC
Confidence 0011133445589999999999987643
No 39
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-35 Score=294.78 Aligned_cols=310 Identities=10% Similarity=0.134 Sum_probs=226.1
Q ss_pred ceeee-eCccccEEEEEEec-CCCEEEEEeCCCcEEEEECCC---Cc---eeeeeCCCCceEEEEe--cCCCEEEEEeCC
Q 009373 150 SIDVL-YGHTEAVLTVFVLA-SAKLLFTSGYDSIVRMWHLED---GF---SIASSKPLGCTIRAVA--ADKKLLVAGGTD 219 (536)
Q Consensus 150 ~~~~l-~~h~~~V~~v~~~~-~~~~l~sgs~dg~v~iwd~~~---~~---~~~~~~~~~~~v~~~~--~~~~~l~sg~~d 219 (536)
.+..+ .+|.+.|++++|+| ++++|++|+.||+|++||+.+ +. ....+ .|...|.++. ++++.|++|+.|
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d 132 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKD 132 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETT
T ss_pred EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCC
Confidence 46677 89999999999999 999999999999999999876 43 22222 4777776665 889999999999
Q ss_pred CcEEEEEcc---cCccceecccCcccccceEEe--eC--CccCEEEEEE----eCCEEEEEecCCeEEEEeCCCceEeEe
Q 009373 220 GFIHCWRAV---EVLPHLFDISGSEKQNTQFRL--WE--HEGPITSLAL----DLTRIYSGSWDMTVRVWDRALLKCLKV 288 (536)
Q Consensus 220 g~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~--~~--h~~~v~~l~~----~~~~l~s~s~dg~i~iwd~~~~~~~~~ 288 (536)
|+|++||+. ++..... .. ...+..+ .. +...+.++.+ ++..|++|+.||.|++||+++++.+..
T Consensus 133 g~i~vwd~~~~~~~~~~~~-~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 207 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKF-LN----CECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQI 207 (437)
T ss_dssp SEEEEEEEEEEEETTEEEE-EE----EEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CEEEEEEeccccCCceeec-cc----cceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEE
Confidence 999999995 3221100 00 0011111 12 6677888885 478999999999999999999999888
Q ss_pred ee---ccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEe----CCCCEEEEEcCCCcEEE
Q 009373 289 LR---HSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARS----HTGDFLFTGGEDGAIHM 358 (536)
Q Consensus 289 ~~---~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~----~~~~~l~tg~~dg~i~i 358 (536)
+. |...|.+++ |++.++++++ |+.|++||+++++.+..+..+|...|++++++ |++.+|++|+.||.|++
T Consensus 208 ~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~i 287 (437)
T 3gre_A 208 IENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTI 287 (437)
T ss_dssp EECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEE
T ss_pred EccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEE
Confidence 86 678999887 7899999888 89999999999999998865688899999665 46779999999999999
Q ss_pred EEcccCcccccccee------------------eeccC--CCCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccCCCC
Q 009373 359 YEIINDCTEANVLLV------------------ATWIP--HTGPVNSLAFEF-PWLVSAAGDGKLSLIDVRKLLRSGRPT 417 (536)
Q Consensus 359 wd~~~~~~~~~~~~~------------------~~~~~--h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~ 417 (536)
||++++.....+... ..+.+ |...|++++|++ .+|++|+.||.|++||+.++.......
T Consensus 288 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 288 WNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp EETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred EEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEe
Confidence 999877421111000 01223 778899999986 589999999999999999875543322
Q ss_pred CCC----ceeeEEeeC--------------CCeeeeccccccEEEEEecCC----EEEEecCCCeEEEEe
Q 009373 418 SGK----RVSRVIEVE--------------PPQRMLHGFECNLLSVDIGAD----RIVCGGEEGIVRIWN 465 (536)
Q Consensus 418 ~~~----~~~~~~~~~--------------~~~~~~~~~~~~v~~~~~~~~----~l~sg~~Dg~i~vW~ 465 (536)
... ......... ........|...|.++++.++ +|+||+.||.|+||+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 368 SPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 110 000000000 111122347788888776544 999999999999995
No 40
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-36 Score=294.67 Aligned_cols=300 Identities=12% Similarity=0.073 Sum_probs=220.2
Q ss_pred eeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCC--ceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEc
Q 009373 152 DVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDG--FSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~ 227 (536)
..+..|.++|++++|+|++++|++|+.|+.|++||+.++ +.+..+.+|...|.++. |++++|++|+.||+|++||+
T Consensus 5 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp EEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred eeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 455667889999999999999999999999999999988 78888899998887765 88999999999999999999
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceE---eEeee--ccccEEEEe-
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKC---LKVLR--HSDWVYGLA- 299 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~---~~~~~--~~~~v~~~~- 299 (536)
.++. .......+.+|...|.+++| ++++|++++.|+.|++||+++++. ...+. |...|.+++
T Consensus 85 ~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 154 (377)
T 3dwl_C 85 RPDG----------TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDW 154 (377)
T ss_dssp --------------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEE
T ss_pred CCCC----------ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEE
Confidence 7752 12345667789999999999 678999999999999999998873 45554 888999987
Q ss_pred -ecCCEEEEec-CCcEEEEeCCC------------------CcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEE
Q 009373 300 -PHDTTVASTS-GSDVYIWDTNS------------------GCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMY 359 (536)
Q Consensus 300 -~~~~~l~~~~-d~~i~i~d~~~------------------~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iw 359 (536)
|+++++++++ |+.|++||+.. ++.+..+ +|...|++++|+|++++|++|+.||.|++|
T Consensus 155 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iw 232 (377)
T 3dwl_C 155 HPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIA 232 (377)
T ss_dssp CTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-C
T ss_pred cCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 7888999888 89999999852 4455555 699999999999999999999999999999
Q ss_pred EcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCccccc-CCCCC-CCc--------------
Q 009373 360 EIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRS-GRPTS-GKR-------------- 421 (536)
Q Consensus 360 d~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~-~~~~~-~~~-------------- 421 (536)
|+.++... ...+..+.+|..+|.+++|+| .+|++++.|+ +.+|+....... ..... ...
T Consensus 233 d~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (377)
T 3dwl_C 233 YPSAPEQP--PRALITVKLSQLPLRSLLWANESAIVAAGYNYS-PILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGR 309 (377)
T ss_dssp EECSTTSC--EEECCCEECSSSCEEEEEEEETTEEEEEESSSS-EEEECCCC---CCSBCCCSCCCCCCBSSSSSBCCCC
T ss_pred ECCCCCCc--ceeeEeecCCCCceEEEEEcCCCCEEEEEcCCc-EEEEEeCCCceEEEeeeccccccccccccccccccc
Confidence 99988321 112677889999999999976 5677776555 457776532111 00000 000
Q ss_pred --eee---------EEe------eCCCeeeeccccccEEEEEecC---C---EEEEecCCCeEEEEeC
Q 009373 422 --VSR---------VIE------VEPPQRMLHGFECNLLSVDIGA---D---RIVCGGEEGIVRIWNF 466 (536)
Q Consensus 422 --~~~---------~~~------~~~~~~~~~~~~~~v~~~~~~~---~---~l~sg~~Dg~i~vW~~ 466 (536)
... +.. ..........|...|.++.+.+ . .|+|||.||.|++||+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 310 EEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp CC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 000 000 0011112234888888887532 2 6999999999999986
No 41
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.5e-34 Score=283.67 Aligned_cols=285 Identities=10% Similarity=0.036 Sum_probs=217.7
Q ss_pred cceeeeeCccccEEEEEEecCC-CEEEEEeCCCcEEEEECCCCceeeeeC--CCCceEEEEe--c-CCCEEEEEeCCCcE
Q 009373 149 YSIDVLYGHTEAVLTVFVLASA-KLLFTSGYDSIVRMWHLEDGFSIASSK--PLGCTIRAVA--A-DKKLLVAGGTDGFI 222 (536)
Q Consensus 149 ~~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~--~-~~~~l~sg~~dg~i 222 (536)
.....+.+|.+.|++++|+|++ ++|++|+.||.|++||+.+++....+. +|...|.++. | ++.+|++++.||.|
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred ceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 4567889999999999999998 999999999999999999888777665 5888887766 6 67899999999999
Q ss_pred EEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe
Q 009373 223 HCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA 299 (536)
Q Consensus 223 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~ 299 (536)
++||+.+.. ........+|...|.+++| ++..|++|+.|+.|++||+ +++.+..+. |...|.+++
T Consensus 144 ~iwd~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~ 211 (383)
T 3ei3_B 144 TLRDFSGSV-----------IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAE 211 (383)
T ss_dssp EEEETTSCE-----------EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEE
T ss_pred EEEECCCCc-----------eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEE
Confidence 999997531 1112222345588999999 6789999999999999999 466666666 899999988
Q ss_pred --ecCC-EEEEec-CCcEEEEeCCC----CcEEEEEccccccceEEEEEeC-CCCEEEEEcCCCcEEEEEcccCcccccc
Q 009373 300 --PHDT-TVASTS-GSDVYIWDTNS----GCLLTVVNGAHVGNTKSLARSH-TGDFLFTGGEDGAIHMYEIINDCTEANV 370 (536)
Q Consensus 300 --~~~~-~l~~~~-d~~i~i~d~~~----~~~~~~~~~~~~~~i~~l~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~ 370 (536)
+++. ++++++ |+.|++||+++ +..+..+ +|...|++++|+| ++.+|++++.||.|++||+++.......
T Consensus 212 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 212 FNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp ECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred ECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 7777 888887 89999999998 6666666 5999999999999 9999999999999999999887432111
Q ss_pred ce-eeeccCCCC----------CeEEEEEcC-CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeecc-
Q 009373 371 LL-VATWIPHTG----------PVNSLAFEF-PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHG- 437 (536)
Q Consensus 371 ~~-~~~~~~h~~----------~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 437 (536)
.. ......|.. .+..++|+| ..+ +++.||.|++||+.++.. ...+.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~-------------------~~~l~~~ 349 (383)
T 3ei3_B 290 IIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGL-------------------VHQLRDP 349 (383)
T ss_dssp EECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCE-------------------EEEECBT
T ss_pred ccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCce-------------------eeeecCC
Confidence 10 001112233 334455554 222 777899999999987432 222322
Q ss_pred -ccccEE--EEEecCCEEEEecCCCeEEEEeCCc
Q 009373 438 -FECNLL--SVDIGADRIVCGGEEGIVRIWNFSQ 468 (536)
Q Consensus 438 -~~~~v~--~~~~~~~~l~sg~~Dg~i~vW~~~~ 468 (536)
|...+. ++++++.+|++|+ ||.|++||+++
T Consensus 350 ~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 350 NAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 333343 4555666999997 99999999975
No 42
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.1e-34 Score=327.08 Aligned_cols=335 Identities=16% Similarity=0.211 Sum_probs=260.4
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~ 227 (536)
....+.+|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+.+|...|.++. |++++|++|+.||+|++||+
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDS 686 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEEC
Confidence 3457889999999999999999999999999999999999999999999999887765 89999999999999999999
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEE----eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--e
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL----DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--P 300 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~----~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~ 300 (536)
.++. ....+.+|...|.+++| ++..+++|+.||.|++||+.++++...+. |...|.++. |
T Consensus 687 ~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp 753 (1249)
T 3sfz_A 687 ATGK-------------LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP 753 (1249)
T ss_dssp TTCC-------------EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS
T ss_pred CCCc-------------eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEec
Confidence 7753 56667788889999988 23478888999999999998888887776 888888776 7
Q ss_pred cCCEEEEec-CCcEEEEeCCCCcEEEE-----------------------------------------------------
Q 009373 301 HDTTVASTS-GSDVYIWDTNSGCLLTV----------------------------------------------------- 326 (536)
Q Consensus 301 ~~~~l~~~~-d~~i~i~d~~~~~~~~~----------------------------------------------------- 326 (536)
+++++++++ |+.|++||+.+++....
T Consensus 754 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~ 833 (1249)
T 3sfz_A 754 DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLA 833 (1249)
T ss_dssp STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEE
T ss_pred CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCcee
Confidence 888888887 78888888876654333
Q ss_pred -EccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEE
Q 009373 327 -VNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLS 403 (536)
Q Consensus 327 -~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~ 403 (536)
+..+|...+.+++|+|++.++++|+.||.|++||+.++ ..+..+.+|...|++++|+| .+|++++.||.|+
T Consensus 834 ~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~------~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~ 907 (1249)
T 3sfz_A 834 EIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR------LKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIR 907 (1249)
T ss_dssp EEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC------ceeeecCCCccceEEEEECCCCCEEEEEeCCCeEE
Confidence 22367788999999999999999999999999999988 67888899999999999986 6999999999999
Q ss_pred EEECCcccccCCCCCCCcee--------------------eEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEE
Q 009373 404 LIDVRKLLRSGRPTSGKRVS--------------------RVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRI 463 (536)
Q Consensus 404 vwd~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~v 463 (536)
+||+.+.............. ....................+++++++++++|+.||.|++
T Consensus 908 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i 987 (1249)
T 3sfz_A 908 VWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKI 987 (1249)
T ss_dssp EEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEE
T ss_pred EEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEE
Confidence 99987643322211110000 0000011111112222334445555669999999999999
Q ss_pred EeCCchhhHHHHHHhhhcccchhHHHhhhhccccccCCCCcceeEeeccc
Q 009373 464 WNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQCSVAAKK 513 (536)
Q Consensus 464 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 513 (536)
|++.++..+.... .....+.+++|+|+|..+++++.+...
T Consensus 988 ~d~~~~~~~~~~~----------~h~~~v~~l~~s~dg~~l~s~~~dg~i 1027 (1249)
T 3sfz_A 988 IELPNNRVFSSGV----------GHKKAVRHIQFTADGKTLISSSEDSVI 1027 (1249)
T ss_dssp EETTTTSCEEECC----------CCSSCCCCEEECSSSSCEEEECSSSBE
T ss_pred EEcCCCceeeecc----------cCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 9999876443211 123456789999999999998765443
No 43
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.5e-34 Score=279.52 Aligned_cols=289 Identities=13% Similarity=0.097 Sum_probs=225.7
Q ss_pred cccEEEEEEecCCCEEEEEeCCC-------cEEEEECCCCce----------eeeeCCCCceEEEEecCCCEEEEEe---
Q 009373 158 TEAVLTVFVLASAKLLFTSGYDS-------IVRMWHLEDGFS----------IASSKPLGCTIRAVAADKKLLVAGG--- 217 (536)
Q Consensus 158 ~~~V~~v~~~~~~~~l~sgs~dg-------~v~iwd~~~~~~----------~~~~~~~~~~v~~~~~~~~~l~sg~--- 217 (536)
.-+|++++|+|++++|++|+.|. .|++|++..+.. ...+.+|...+.+++++++.+++|.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence 45899999999999999998654 599999876532 1245778888999999998888764
Q ss_pred --------CCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEE--EecCCeEEEEeCCCceE
Q 009373 218 --------TDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYS--GSWDMTVRVWDRALLKC 285 (536)
Q Consensus 218 --------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s--~s~dg~i~iwd~~~~~~ 285 (536)
.|+.+++|++.+.......... ........+...+.+++| |++++++ ++.|++|++||+.++++
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~ 169 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQLEFLTS----VDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE 169 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTEEEEEEE----ECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE
T ss_pred ccEEEEecCCCcEEEEEecCCCceEEEeee----eceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE
Confidence 5678999988665321110000 001112345567889999 7777764 45799999999999999
Q ss_pred eEeeeccccEEEEe--ecCCEEEEecCCcEEEEeCCCCcEEEE-EccccccceEEEEEeCCCCEEEEEcCCC----cEEE
Q 009373 286 LKVLRHSDWVYGLA--PHDTTVASTSGSDVYIWDTNSGCLLTV-VNGAHVGNTKSLARSHTGDFLFTGGEDG----AIHM 358 (536)
Q Consensus 286 ~~~~~~~~~v~~~~--~~~~~l~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~i~~l~~~~~~~~l~tg~~dg----~i~i 358 (536)
+..+.|...|.+++ |+++++++++++.+.+|+..+++.+.. ...+|...|.+++|+|++.++++++.|+ .+++
T Consensus 170 ~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 170 KFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp EEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred EEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 99999888999887 899999999988899999888876654 3346888999999999999999999887 5888
Q ss_pred EEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeec
Q 009373 359 YEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLH 436 (536)
Q Consensus 359 wd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (536)
|++..... .......+.+|..+|++++|+| .+|++|+.|++|+|||++++... ...+.
T Consensus 250 ~~~~~~~~--~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~------------------~~~~~ 309 (365)
T 4h5i_A 250 ISIKSGNT--SVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMS------------------KIFKQ 309 (365)
T ss_dssp EEEETTEE--EEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE------------------EEETT
T ss_pred ccccccee--cceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEE------------------EEecC
Confidence 88876631 1233556789999999999987 79999999999999999874211 12347
Q ss_pred cccccEEEEEecCC--EEEEecCCCeEEEEeCCchh
Q 009373 437 GFECNLLSVDIGAD--RIVCGGEEGIVRIWNFSQAF 470 (536)
Q Consensus 437 ~~~~~v~~~~~~~~--~l~sg~~Dg~i~vW~~~~~~ 470 (536)
+|...|.+++|+++ +|||||.|++|+||+++++.
T Consensus 310 gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 310 AHSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp SSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred cccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 89999999888765 99999999999999997654
No 44
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.4e-34 Score=269.88 Aligned_cols=246 Identities=15% Similarity=0.132 Sum_probs=201.2
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCC--CceeeeeCCCCceEEEEe--c--CCCEEEEEeCCCcEEE
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLED--GFSIASSKPLGCTIRAVA--A--DKKLLVAGGTDGFIHC 224 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~--~~~~~~~~~~~~~v~~~~--~--~~~~l~sg~~dg~i~v 224 (536)
+..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.+ ++.+.++.+|...|.++. + ++++|++|+.||+|++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 457889999999999999999999999999999999974 467888999999998876 3 3789999999999999
Q ss_pred EEcccCccceecccCcccccceEEeeCCccCEEEEEEe----CCEEEEEecCCeEEEEeCCCceE--eEeee-ccccEEE
Q 009373 225 WRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD----LTRIYSGSWDMTVRVWDRALLKC--LKVLR-HSDWVYG 297 (536)
Q Consensus 225 wd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~~l~s~s~dg~i~iwd~~~~~~--~~~~~-~~~~v~~ 297 (536)
||+.++. ......+.+|...|.+++|. +.+|++++.|++|++||++++.. ...+. |...|.+
T Consensus 82 Wd~~~~~-----------~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~ 150 (297)
T 2pm7_B 82 WKEENGR-----------WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNS 150 (297)
T ss_dssp EEBSSSC-----------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEE
T ss_pred EEcCCCc-----------eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccce
Confidence 9997652 22445677899999999993 57999999999999999987632 23333 8888988
Q ss_pred Ee--ec-------------CCEEEEec-CCcEEEEeCCCCc----EEEEEccccccceEEEEEeCCC---CEEEEEcCCC
Q 009373 298 LA--PH-------------DTTVASTS-GSDVYIWDTNSGC----LLTVVNGAHVGNTKSLARSHTG---DFLFTGGEDG 354 (536)
Q Consensus 298 ~~--~~-------------~~~l~~~~-d~~i~i~d~~~~~----~~~~~~~~~~~~i~~l~~~~~~---~~l~tg~~dg 354 (536)
++ |+ +++|++++ |+.|++||+++++ ....+. +|...|++++|+|++ .+|++|+.|+
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp EEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCCCceEEEEECCCCCCceEEEEEECCC
Confidence 87 43 46888888 9999999998876 445554 799999999999985 8999999999
Q ss_pred cEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCc
Q 009373 355 AIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 355 ~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~ 409 (536)
+|++||++....... ........|...|.+++|+| .+|++++.||.|++|+...
T Consensus 230 ~v~iWd~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 230 TCIIWTQDNEQGPWK-KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CEEEEEESSTTSCCE-EEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred cEEEEEeCCCCCccc-eeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 999999977521100 11112257889999999986 7999999999999999763
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.5e-34 Score=281.95 Aligned_cols=290 Identities=13% Similarity=0.167 Sum_probs=233.7
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~ 227 (536)
....+.+| ..+....|+|++++|++|+.||.|++||+.+++....+.+|...|.++. |++++|++|+.||.|++||+
T Consensus 90 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 90 GSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSV 168 (420)
T ss_dssp TTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 34455666 5556667899999999999999999999999999888889998887765 88999999999999999999
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee----ccccEEEEe--
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR----HSDWVYGLA-- 299 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~-- 299 (536)
.++. ....+.+|.+.|.+++| +++.|++++.||+|++||+++++.+..+. +...+.++.
T Consensus 169 ~~~~-------------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (420)
T 3vl1_A 169 KDGS-------------NPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALF 235 (420)
T ss_dssp TTCC-------------CCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEE
T ss_pred CCCc-------------CceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEe
Confidence 7653 45667899999999999 67899999999999999999999888876 344444443
Q ss_pred ---------------------ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCC-EEEEEcCCCcE
Q 009373 300 ---------------------PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGD-FLFTGGEDGAI 356 (536)
Q Consensus 300 ---------------------~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~tg~~dg~i 356 (536)
++++++++++ |+.|++||+++++.+..+..+|...|++++|+|++. +|++|+.||.|
T Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i 315 (420)
T 3vl1_A 236 VGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGML 315 (420)
T ss_dssp ECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred cCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeE
Confidence 5778888888 899999999999998888777899999999999998 99999999999
Q ss_pred EEEEcccCccccccceeeeccC-CCCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeee
Q 009373 357 HMYEIINDCTEANVLLVATWIP-HTGPVNSLAFEF-PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRM 434 (536)
Q Consensus 357 ~iwd~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (536)
++||++++. .++..+.+ |...|+++.+.+ .+|++++.||.|++||+.......... . ......
T Consensus 316 ~vwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~---------~-~~~~~~ 380 (420)
T 3vl1_A 316 AQWDLRSPE-----CPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAI---------E-FETPTF 380 (420)
T ss_dssp EEEETTCTT-----SCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCSCEE---------C-TTSCEE
T ss_pred EEEEcCCCc-----CchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCCCccce---------e-ccCccE
Confidence 999998873 23455555 778999998865 689999999999999998743322111 0 111222
Q ss_pred eccccccEEEEE--ecCC---EEEEecCCCeEEEEeCCc
Q 009373 435 LHGFECNLLSVD--IGAD---RIVCGGEEGIVRIWNFSQ 468 (536)
Q Consensus 435 ~~~~~~~v~~~~--~~~~---~l~sg~~Dg~i~vW~~~~ 468 (536)
+.+|...+.++. +++. .++++|.+|.+.+|++++
T Consensus 381 ~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 381 LVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp ECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 345555555544 5556 688888899999999875
No 46
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.6e-34 Score=271.08 Aligned_cols=243 Identities=16% Similarity=0.244 Sum_probs=208.2
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~ 227 (536)
++..+.+|...|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.++. +++.+|++|+.|++|++||+
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~ 136 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 5778999999999999999999999999999999999999999999999999888765 88999999999999999998
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEEeC--------CEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEE
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDL--------TRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGL 298 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--------~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~ 298 (536)
... ....+.+|...|.++.+.+ ..+++++.|++|++||+++.+....+. |...|.++
T Consensus 137 ~~~--------------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~ 202 (319)
T 3frx_A 137 KGQ--------------CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTL 202 (319)
T ss_dssp TSC--------------EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEE
T ss_pred CCC--------------eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEE
Confidence 532 5567789999999999932 379999999999999999998887776 89999988
Q ss_pred e--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccce--e
Q 009373 299 A--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLL--V 373 (536)
Q Consensus 299 ~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~--~ 373 (536)
+ |++++|++++ |+.|++||+.+++.+..+. +...|.+++|+|++.+|++++.+ .+++|++........... .
T Consensus 203 ~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~ 279 (319)
T 3frx_A 203 TASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS--AQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFA 279 (319)
T ss_dssp EECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--CCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCT
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec--CCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCcccc
Confidence 7 8899999988 8999999999999998885 55789999999999999988765 499999977622111100 0
Q ss_pred eeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCc
Q 009373 374 ATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 374 ~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~ 409 (536)
.....|...+.+++|+| .+|++|+.||.|++||+.+
T Consensus 280 ~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 280 GYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp TCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred ccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 11134567899999987 7999999999999999876
No 47
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.7e-34 Score=311.70 Aligned_cols=282 Identities=18% Similarity=0.238 Sum_probs=241.6
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEE--ecCCCEEEEEeCCCcEEEEEc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAV--AADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~--~~~~~~l~sg~~dg~i~vwd~ 227 (536)
..+.+.+|.+.|++++|+|++++|++|+.||.|+|||+.+++.+..+.+|...|.++ +|++++|++|+.||.|++||+
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 357899999999999999999999999999999999999999999999998887765 499999999999999999999
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCc-eEeEeee-ccccEEEEe--e-
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALL-KCLKVLR-HSDWVYGLA--P- 300 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~-~~~~v~~~~--~- 300 (536)
.++. ....+.+|.+.|.+++| ++.+|++++.||+|++||+.++ .....+. |...|.++. |
T Consensus 85 ~~~~-------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~ 151 (814)
T 3mkq_A 85 NTGE-------------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK 151 (814)
T ss_dssp TTCC-------------EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETT
T ss_pred CCCc-------------EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcC
Confidence 7753 56677889999999999 6779999999999999999887 5566665 888899887 5
Q ss_pred cCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeC--CCCEEEEEcCCCcEEEEEcccCccccccceeeecc
Q 009373 301 HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSH--TGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWI 377 (536)
Q Consensus 301 ~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~ 377 (536)
++..+++++ |+.|++||+.++.....+...+...+.+++|+| ++.+|++|+.||.|++||+.++ ..+..+.
T Consensus 152 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~------~~~~~~~ 225 (814)
T 3mkq_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK------SCVATLE 225 (814)
T ss_dssp EEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT------EEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC------cEEEEEc
Confidence 677888887 899999999999888887766668999999999 9999999999999999999888 6778888
Q ss_pred CCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC---EE
Q 009373 378 PHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD---RI 452 (536)
Q Consensus 378 ~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l 452 (536)
+|...|.+++|+| .+|++++.||.|++||+.+.. ....+..+...+.+++++++ .+
T Consensus 226 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~-------------------~~~~~~~~~~~v~~~~~~~~~~~~~ 286 (814)
T 3mkq_A 226 GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK-------------------VEKTLNVGLERSWCIATHPTGRKNY 286 (814)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS-------------------EEEEECCSSSSEEEEEECTTCGGGE
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-------------------EEEEeecCCCcEEEEEEccCCCceE
Confidence 9999999999987 689999999999999998742 22334556667777777665 23
Q ss_pred EEecCCCeEEEEeCCch
Q 009373 453 VCGGEEGIVRIWNFSQA 469 (536)
Q Consensus 453 ~sg~~Dg~i~vW~~~~~ 469 (536)
++++.|+.+.+|++..+
T Consensus 287 ~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 287 IASGFDNGFTVLSLGND 303 (814)
T ss_dssp EEEEETTEEEEEECSCC
T ss_pred EEEEeCCCEEEEEcCCC
Confidence 44445677889987654
No 48
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.4e-34 Score=326.46 Aligned_cols=354 Identities=16% Similarity=0.192 Sum_probs=275.3
Q ss_pred hhccccCCccceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--c--CCCEEEE
Q 009373 140 FRSKTFLGRYSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--A--DKKLLVA 215 (536)
Q Consensus 140 ~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~--~~~~l~s 215 (536)
++.+.......+..+.+|.+.|.+++|+|++++|++|+.||+|++||+.+++.+..+.+|...+.++. + ++..+++
T Consensus 639 i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s 718 (1249)
T 3sfz_A 639 LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLAT 718 (1249)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEE
T ss_pred EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEE
Confidence 34455555566888999999999999999999999999999999999999999999999999888776 5 4568999
Q ss_pred EeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee---
Q 009373 216 GGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR--- 290 (536)
Q Consensus 216 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--- 290 (536)
|+.||.|++||+.++. ....+.+|.+.|.+++| +++.+++++.||+|++||+.+++....+.
T Consensus 719 g~~d~~v~vwd~~~~~-------------~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~ 785 (1249)
T 3sfz_A 719 GSNDFFLKLWDLNQKE-------------CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKR 785 (1249)
T ss_dssp EETTSCEEEEETTSSS-------------EEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCC
T ss_pred EeCCCeEEEEECCCcc-------------hhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccc
Confidence 9999999999997753 56678899999999999 77899999999999999998776544331
Q ss_pred -----------------------------------------------------ccccEEEEe--ecCCEEEEec-CCcEE
Q 009373 291 -----------------------------------------------------HSDWVYGLA--PHDTTVASTS-GSDVY 314 (536)
Q Consensus 291 -----------------------------------------------------~~~~v~~~~--~~~~~l~~~~-d~~i~ 314 (536)
|...|.++. |++.++++++ ++.|+
T Consensus 786 ~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~ 865 (1249)
T 3sfz_A 786 FFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVE 865 (1249)
T ss_dssp CC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEE
T ss_pred cccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEE
Confidence 334455554 7888898888 89999
Q ss_pred EEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcc----------------------------
Q 009373 315 IWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCT---------------------------- 366 (536)
Q Consensus 315 i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~---------------------------- 366 (536)
+||+.++..+..+. +|...|++++|+|++.+|++++.||.|++||+.....
T Consensus 866 vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1249)
T 3sfz_A 866 LWNIDSRLKVADCR-GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIR 944 (1249)
T ss_dssp EEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSS
T ss_pred EEEcCCCceeeecC-CCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCc
Confidence 99999999988885 6999999999999999999999999999999753100
Q ss_pred ---------------------------------------------ccccceeeeccCCCCCeEEEEEcC--CeEEEEeCC
Q 009373 367 ---------------------------------------------EANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGD 399 (536)
Q Consensus 367 ---------------------------------------------~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~d 399 (536)
.........+.+|...|++++|+| .+|++++.|
T Consensus 945 ~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d 1024 (1249)
T 3sfz_A 945 GLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED 1024 (1249)
T ss_dssp SEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS
T ss_pred ceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC
Confidence 001123445668999999999986 699999999
Q ss_pred CcEEEEECCcccccCCCCCCCceeeEE-------------------e--eCCCeeeeccccccEEEEEecC--CEEEEec
Q 009373 400 GKLSLIDVRKLLRSGRPTSGKRVSRVI-------------------E--VEPPQRMLHGFECNLLSVDIGA--DRIVCGG 456 (536)
Q Consensus 400 g~i~vwd~~~~~~~~~~~~~~~~~~~~-------------------~--~~~~~~~~~~~~~~v~~~~~~~--~~l~sg~ 456 (536)
|.|++||+.++...........+..+. . .......+.+|...+.++.+++ .++++|+
T Consensus 1025 g~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s 1104 (1249)
T 3sfz_A 1025 SVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTS 1104 (1249)
T ss_dssp SBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEEC
T ss_pred CEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEc
Confidence 999999998765443322222221111 1 1223345566777777666655 4999999
Q ss_pred CCCeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhhccccccCCCCcceeEeecccCCcC
Q 009373 457 EEGIVRIWNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQCSVAAKKNPMN 517 (536)
Q Consensus 457 ~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 517 (536)
.||+|++||+.++..+.... + ....+.+++|+|+|..+++++.+.....++
T Consensus 1105 ~d~~v~iwd~~~~~~~~~l~----~------h~~~v~~~~~s~dg~~lat~~~dg~i~vwd 1155 (1249)
T 3sfz_A 1105 ADKTAKIWSFDLLSPLHELK----G------HNGCVRCSAFSLDGILLATGDDNGEIRIWN 1155 (1249)
T ss_dssp CSSCCCEECSSSSSCSBCCC----C------CSSCEEEEEECSSSSEEEEEETTSCCCEEE
T ss_pred CCCcEEEEECCCcceeeeec----c------CCCcEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 99999999999876543221 1 223467899999999999987665544443
No 49
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-34 Score=285.08 Aligned_cols=290 Identities=14% Similarity=0.116 Sum_probs=235.1
Q ss_pred CccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEcccCccc
Q 009373 156 GHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRAVEVLPH 233 (536)
Q Consensus 156 ~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~~~~~~~ 233 (536)
+|.+.|++++|+|++++|++|+.||.|++|| .+++.+..+..|...+.++. |++++|++++.||.|++||+.++.
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-- 182 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT-- 182 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE--
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc--
Confidence 3788999999999999999999999999999 77888899999988887765 889999999999999999997753
Q ss_pred eecccCcccccceEEeeCCccC---------------EEEEEE-eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEE
Q 009373 234 LFDISGSEKQNTQFRLWEHEGP---------------ITSLAL-DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVY 296 (536)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~h~~~---------------v~~l~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~ 296 (536)
....+..+... +.+++| .++.+++++.||.|++||+.+++....+. |...|.
T Consensus 183 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~ 251 (425)
T 1r5m_A 183 -----------VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPIS 251 (425)
T ss_dssp -----------EEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEE
T ss_pred -----------EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceE
Confidence 33334444444 888888 66889999999999999999998887776 888898
Q ss_pred EEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcccccccee
Q 009373 297 GLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLV 373 (536)
Q Consensus 297 ~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~ 373 (536)
++. ++++++++++ ++.|++||+++++.+..+. +|...|.+++|+|++ ++++++.||.|++||++++ ..+
T Consensus 252 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~------~~~ 323 (425)
T 1r5m_A 252 VLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFY-GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN------TLL 323 (425)
T ss_dssp EEEEETTTTEEEEEETTSCEEEECSSSBSCSEEEC-CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT------EEE
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECCCCccceEec-CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC------cEe
Confidence 887 7888999888 8999999999999888885 699999999999999 9999999999999999888 677
Q ss_pred eeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeE-EeeCCCeeeeccccc--cEEEEEec
Q 009373 374 ATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRV-IEVEPPQRMLHGFEC--NLLSVDIG 448 (536)
Q Consensus 374 ~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~v~~~~~~ 448 (536)
..+..|...|.+++|+| .+|++++.||.|++||+++...............+ ....+....+.+|.. .|.++.++
T Consensus 324 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 403 (425)
T 1r5m_A 324 ALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWN 403 (425)
T ss_dssp EEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEEC
T ss_pred EecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEcc
Confidence 78889999999999986 79999999999999999876422211111100000 011224455677755 78888876
Q ss_pred CC--EEEEecCCCeEEEEeCC
Q 009373 449 AD--RIVCGGEEGIVRIWNFS 467 (536)
Q Consensus 449 ~~--~l~sg~~Dg~i~vW~~~ 467 (536)
++ +|++|+.||.|++|+++
T Consensus 404 ~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 404 CAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp TTSSEEEEEESSSCCEEEECC
T ss_pred CCCceEEEEecCceEEEEeec
Confidence 55 99999999999999986
No 50
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-34 Score=281.60 Aligned_cols=287 Identities=15% Similarity=0.188 Sum_probs=228.5
Q ss_pred eeeeCccccEEEEEEecC----CCEEEEEeCCCcEEEEECCCCceeeeeCC-----CCceEEE--EecC----CCEEEEE
Q 009373 152 DVLYGHTEAVLTVFVLAS----AKLLFTSGYDSIVRMWHLEDGFSIASSKP-----LGCTIRA--VAAD----KKLLVAG 216 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~----~~~l~sgs~dg~v~iwd~~~~~~~~~~~~-----~~~~v~~--~~~~----~~~l~sg 216 (536)
....+|.++|++++|+|+ ...+++++.++.|++||+.+++.+..+.. |...+.+ ++++ +.+|++|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 455699999999999984 45666777777999999998877666543 4455655 4576 6799999
Q ss_pred eCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE---eCCEEEEEecCCeEEEEeCCCceEeEee----
Q 009373 217 GTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL---DLTRIYSGSWDMTVRVWDRALLKCLKVL---- 289 (536)
Q Consensus 217 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~---~~~~l~s~s~dg~i~iwd~~~~~~~~~~---- 289 (536)
+.||.|++||+.++. ....+.+|...|.+++| ++..|++|+.||.|++||+++++....+
T Consensus 92 ~~dg~i~v~d~~~~~-------------~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 158 (366)
T 3k26_A 92 GSRGIIRIINPITMQ-------------CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVE 158 (366)
T ss_dssp ETTCEEEEECTTTCC-------------EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTT
T ss_pred cCCCEEEEEEchhce-------------EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccc
Confidence 999999999997653 56677889999999999 4579999999999999999999998887
Q ss_pred eccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEc---------------------------cccccceEEEE
Q 009373 290 RHSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVN---------------------------GAHVGNTKSLA 339 (536)
Q Consensus 290 ~~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~---------------------------~~~~~~i~~l~ 339 (536)
.|...|.++. +++.++++++ |+.|++||+++++....+. .+|...|.+++
T Consensus 159 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 238 (366)
T 3k26_A 159 GHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR 238 (366)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE
T ss_pred cccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEE
Confidence 3889999988 7888999888 8999999999875443221 23889999999
Q ss_pred EeCCCCEEEEEcCCCcEEEEEcccCccc--------cccceeeeccCCCCCeEEEEEc----CCeEEEEeCCCcEEEEEC
Q 009373 340 RSHTGDFLFTGGEDGAIHMYEIINDCTE--------ANVLLVATWIPHTGPVNSLAFE----FPWLVSAAGDGKLSLIDV 407 (536)
Q Consensus 340 ~~~~~~~l~tg~~dg~i~iwd~~~~~~~--------~~~~~~~~~~~h~~~v~~l~~~----~~~l~s~s~dg~i~vwd~ 407 (536)
|+ +++|++++.||.|++||+.+.... .....+..+.+|...|++++|+ +.+|++|+.||.|++||+
T Consensus 239 ~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~ 316 (366)
T 3k26_A 239 WL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDL 316 (366)
T ss_dssp EE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEEC
T ss_pred Ec--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEEC
Confidence 98 789999999999999999876421 1123467788899999999996 469999999999999999
Q ss_pred CcccccCCCCCCCceeeEEeeCCCeeeeccc--cccEEEEEecC--CEEEEecCCCeEEEEeCCc
Q 009373 408 RKLLRSGRPTSGKRVSRVIEVEPPQRMLHGF--ECNLLSVDIGA--DRIVCGGEEGIVRIWNFSQ 468 (536)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~--~~l~sg~~Dg~i~vW~~~~ 468 (536)
.+..... .....+.+| ...|.++.+++ ++|++|+.||.|++||+.+
T Consensus 317 ~~~~~~~---------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 317 EVEDPHK---------------AKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp CSSSGGG---------------CEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCCCCcc---------------ccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 8753221 111234444 67788777765 4999999999999999853
No 51
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.4e-33 Score=294.50 Aligned_cols=318 Identities=15% Similarity=0.161 Sum_probs=246.1
Q ss_pred cceeeeeCccccEEEEEEecCCC-EEEEEeCCCcEEEEECCCCceeeeeCCCCc---eEEEEe--cC-CCEEEEEeCCCc
Q 009373 149 YSIDVLYGHTEAVLTVFVLASAK-LLFTSGYDSIVRMWHLEDGFSIASSKPLGC---TIRAVA--AD-KKLLVAGGTDGF 221 (536)
Q Consensus 149 ~~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~---~v~~~~--~~-~~~l~sg~~dg~ 221 (536)
..+..+.+|.+.|.+++|+|+++ ++++|+.|+.|++||+.+++.+..+.+|.. .+.++. |+ +++|++|+.||.
T Consensus 151 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 230 (615)
T 1pgu_A 151 NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK 230 (615)
T ss_dssp CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC
T ss_pred CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe
Confidence 35778899999999999999998 899999999999999999999999998888 776665 88 999999999999
Q ss_pred EEEEEcccCccceecccCcccccceEEe-e---CCccCEEEEEE-eCCEEEEEecCCeEEEEeCCCceEeEeeec-----
Q 009373 222 IHCWRAVEVLPHLFDISGSEKQNTQFRL-W---EHEGPITSLAL-DLTRIYSGSWDMTVRVWDRALLKCLKVLRH----- 291 (536)
Q Consensus 222 i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~---~h~~~v~~l~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~----- 291 (536)
|++||+.++. ....+ . +|...|.+++| ++.+|++++.||.|++||+.+++.+..+..
T Consensus 231 i~vwd~~~~~-------------~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 297 (615)
T 1pgu_A 231 ISCFDGKSGE-------------FLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQL 297 (615)
T ss_dssp EEEEETTTCC-------------EEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCG
T ss_pred EEEEECCCCC-------------EeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcc
Confidence 9999997753 44445 4 89999999999 888999999999999999999999888873
Q ss_pred cccEEEEe-ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCC--------------------------
Q 009373 292 SDWVYGLA-PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHT-------------------------- 343 (536)
Q Consensus 292 ~~~v~~~~-~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~-------------------------- 343 (536)
...+.++. +++.++++++ ++.|++||+.+++.+..+. +|...|++++| |+
T Consensus 298 ~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~-~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v 375 (615)
T 1pgu_A 298 GNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTIS-GHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLI 375 (615)
T ss_dssp GGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEEC-CCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCE
T ss_pred cCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEe-CCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCce
Confidence 35666666 6888888888 8999999999888777764 45555555444 32
Q ss_pred -------CCEEEEEcCCCcEEEEEcccCcc--------------------------------------------------
Q 009373 344 -------GDFLFTGGEDGAIHMYEIINDCT-------------------------------------------------- 366 (536)
Q Consensus 344 -------~~~l~tg~~dg~i~iwd~~~~~~-------------------------------------------------- 366 (536)
+..|++++.||.|++||+.+...
T Consensus 376 ~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (615)
T 1pgu_A 376 VSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS 455 (615)
T ss_dssp EEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC
T ss_pred EEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc
Confidence 55556666666666665543110
Q ss_pred ----------cccc--------cee-eeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeE
Q 009373 367 ----------EANV--------LLV-ATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRV 425 (536)
Q Consensus 367 ----------~~~~--------~~~-~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 425 (536)
...+ ... ..+.+|...|++++|+| .+|++++.||.|++||+.+....
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~------------ 523 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK------------ 523 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE------------
T ss_pred CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcce------------
Confidence 0000 111 55678999999999976 79999999999999999875322
Q ss_pred EeeCCCeeeecc-ccccEEEEEecC------------CEEEEecCCCeEEEEeCCchh-hHHHHHHhhhcccchhHHHhh
Q 009373 426 IEVEPPQRMLHG-FECNLLSVDIGA------------DRIVCGGEEGIVRIWNFSQAF-EIERRARALRGIRLENRMRRR 491 (536)
Q Consensus 426 ~~~~~~~~~~~~-~~~~v~~~~~~~------------~~l~sg~~Dg~i~vW~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 491 (536)
..+.+ |...|.++.+++ .+|++|+.||.|++|++.++. .+... ......
T Consensus 524 -------~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~----------~~h~~~ 586 (615)
T 1pgu_A 524 -------TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKAL----------NAHKDG 586 (615)
T ss_dssp -------ECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEET----------TSSTTC
T ss_pred -------eEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhh----------hcCccc
Confidence 22344 777788888754 599999999999999999873 22211 112345
Q ss_pred hhccccccCCCCcceeEeec
Q 009373 492 KLQTEMSSKGGRTDQCSVAA 511 (536)
Q Consensus 492 ~~~~~~~~~g~~~~~~~~~~ 511 (536)
+.+++|+|+|. +++++.+.
T Consensus 587 v~~l~~s~~~~-l~s~~~d~ 605 (615)
T 1pgu_A 587 VNNLLWETPST-LVSSGADA 605 (615)
T ss_dssp EEEEEEEETTE-EEEEETTS
T ss_pred eEEEEEcCCCC-eEEecCCc
Confidence 78899999999 88776543
No 52
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.4e-35 Score=282.87 Aligned_cols=301 Identities=18% Similarity=0.178 Sum_probs=209.6
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEE--ecCCCEEEEEeC------CCcEEEEEcccCccceec
Q 009373 165 FVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAV--AADKKLLVAGGT------DGFIHCWRAVEVLPHLFD 236 (536)
Q Consensus 165 ~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~--~~~~~~l~sg~~------dg~i~vwd~~~~~~~~~~ 236 (536)
.+.+++ +++.++.+.....|++....+ ..|...|.++ +|||++|++|+. |+.|++|+..++..
T Consensus 12 d~g~~~-~~~~~~g~~~~~~w~~p~~~p----~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~---- 82 (357)
T 4g56_B 12 DLGTEN-LYFQSNGSSKGSAWGRPVTAP----ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAP---- 82 (357)
T ss_dssp ---------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC-------
T ss_pred CCCccc-eEEecCCCccccccCCCCCCc----ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCc----
Confidence 344444 445555677889999865432 4577777655 599999999997 77899998766531
Q ss_pred ccCcccccceEEeeCCccCEEEEEE-eCCEEEEEecCCeEEEEeCCCceEeEee-----eccccEEEEe--ecCCEEEEe
Q 009373 237 ISGSEKQNTQFRLWEHEGPITSLAL-DLTRIYSGSWDMTVRVWDRALLKCLKVL-----RHSDWVYGLA--PHDTTVAST 308 (536)
Q Consensus 237 ~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~-----~~~~~v~~~~--~~~~~l~~~ 308 (536)
.........+|...|.+++| ..+.+++++.||+|++||+.+++..... .|...|.+++ |++++|+++
T Consensus 83 -----~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sg 157 (357)
T 4g56_B 83 -----NESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSG 157 (357)
T ss_dssp -----CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEE
T ss_pred -----ceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEE
Confidence 12233445678999999999 4467888999999999999888754332 3788999887 889999998
Q ss_pred c-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCC-EEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEE
Q 009373 309 S-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGD-FLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSL 386 (536)
Q Consensus 309 ~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l 386 (536)
+ |+.|++||+++++.+..+. +|...|++++|+|++. ++++++.||.|++||++++.. ........|...++++
T Consensus 158 s~dg~v~iwd~~~~~~~~~~~-~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~----~~~~~~~~~~~~v~~v 232 (357)
T 4g56_B 158 GKDFSVKVWDLSQKAVLKSYN-AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP----ATRIDFCASDTIPTSV 232 (357)
T ss_dssp ETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC----BCBCCCTTCCSCEEEE
T ss_pred eCCCeEEEEECCCCcEEEEEc-CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce----eeeeeeccccccccch
Confidence 8 8999999999999999886 6999999999999875 789999999999999988732 1222345678899999
Q ss_pred EEcC---CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC---EEEEecCCCe
Q 009373 387 AFEF---PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD---RIVCGGEEGI 460 (536)
Q Consensus 387 ~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l~sg~~Dg~ 460 (536)
+|+| .+|++|+.|+.|++||++++. ....+.+|...|.++.++++ +|++|+.||+
T Consensus 233 ~~sp~~~~~la~g~~d~~i~~wd~~~~~-------------------~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~ 293 (357)
T 4g56_B 233 TWHPEKDDTFACGDETGNVSLVNIKNPD-------------------SAQTSAVHSQNITGLAYSYHSSPFLASISEDCT 293 (357)
T ss_dssp EECTTSTTEEEEEESSSCEEEEESSCGG-------------------GCEEECCCSSCEEEEEECSSSSCCEEEEETTSC
T ss_pred hhhhcccceEEEeecccceeEEECCCCc-------------------EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE
Confidence 9986 589999999999999998742 23456778888888887643 7999999999
Q ss_pred EEEEeCCchhhHHHHHHhhhcccchhHHHhhhhcccccc-CCCCcceeEeecccC
Q 009373 461 VRIWNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSS-KGGRTDQCSVAAKKN 514 (536)
Q Consensus 461 i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~ 514 (536)
|+|||+.+++.+... + ....+.+++|+| +|..+++++.+.+..
T Consensus 294 i~iwd~~~~~~~~~~-----~------H~~~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 294 VAVLDADFSEVFRDL-----S------HRDFVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp EEEECTTSCEEEEEC-----C------CSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EEEEECCCCcEeEEC-----C------CCCCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 999999988654321 1 234577899998 788999988765443
No 53
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-35 Score=292.77 Aligned_cols=304 Identities=15% Similarity=0.149 Sum_probs=234.5
Q ss_pred eCccccEEEEEEecCCCEEEEEeCCCcEEEEECCC----CceeeeeCCCCceEEEEe--cC-CCEEEEEeCCCcEEEEEc
Q 009373 155 YGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLED----GFSIASSKPLGCTIRAVA--AD-KKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 155 ~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~--~~-~~~l~sg~~dg~i~vwd~ 227 (536)
..|...|++++|+|++.+|++|+.||.|++||+.+ .+.+..+.+|...|.++. |+ +.+|++|+.||.|++||+
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 36899999999999999999999999999999987 457888888988776665 76 889999999999999999
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEE--e-CCEEEEEecCCeEEEEeCCCceEeEeee-c------cccEEE
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--D-LTRIYSGSWDMTVRVWDRALLKCLKVLR-H------SDWVYG 297 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~------~~~v~~ 297 (536)
.++....... .........+|...|.+++| + +..|++++.||.|++||+++++.+..+. + ...|.+
T Consensus 144 ~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~ 219 (416)
T 2pm9_A 144 NKCTESPSNY----TPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSV 219 (416)
T ss_dssp TTTSSCTTTC----CCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEE
T ss_pred CCCccccccc----cccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEE
Confidence 8763100000 01112234679999999999 3 5789999999999999999999988887 3 678888
Q ss_pred Ee--ecC-CEEEEec-CC---cEEEEeCCCC-cEEEEEccccccceEEEEEeC-CCCEEEEEcCCCcEEEEEcccCcccc
Q 009373 298 LA--PHD-TTVASTS-GS---DVYIWDTNSG-CLLTVVNGAHVGNTKSLARSH-TGDFLFTGGEDGAIHMYEIINDCTEA 368 (536)
Q Consensus 298 ~~--~~~-~~l~~~~-d~---~i~i~d~~~~-~~~~~~~~~~~~~i~~l~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~ 368 (536)
+. |++ .++++++ ++ .|++||++++ ..+..+..+|...|++++|+| ++.+|++++.||.|++||++++
T Consensus 220 ~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~---- 295 (416)
T 2pm9_A 220 VEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA---- 295 (416)
T ss_dssp EEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC----
T ss_pred EEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC----
Confidence 87 665 5788777 67 9999999987 455555326999999999999 8999999999999999999988
Q ss_pred ccceeeeccCCCCCeEEEEEcC---CeEEEEeCCCcEEEEECCcccccCCCCC---CCcee--eEEee------------
Q 009373 369 NVLLVATWIPHTGPVNSLAFEF---PWLVSAAGDGKLSLIDVRKLLRSGRPTS---GKRVS--RVIEV------------ 428 (536)
Q Consensus 369 ~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~---~~~~~--~~~~~------------ 428 (536)
..+..+.+|...|++++|+| .+|++++.||.|++||+.+......... ..... .+...
T Consensus 296 --~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (416)
T 2pm9_A 296 --EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSV 373 (416)
T ss_dssp --CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCS
T ss_pred --ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccccccc
Confidence 67888889999999999986 6899999999999999987654332211 00000 00000
Q ss_pred CCCeeeecccccc--EEEEEecCCEEEEecCCCeEEEEeCCch
Q 009373 429 EPPQRMLHGFECN--LLSVDIGADRIVCGGEEGIVRIWNFSQA 469 (536)
Q Consensus 429 ~~~~~~~~~~~~~--v~~~~~~~~~l~sg~~Dg~i~vW~~~~~ 469 (536)
... .....|... ..++++++++|++|+.||.|+||++.++
T Consensus 374 ~~~-~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 374 FHL-QAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp SCC-CCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred ccc-cCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 000 111113333 4567777889999999999999999874
No 54
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-35 Score=294.67 Aligned_cols=303 Identities=11% Similarity=0.101 Sum_probs=218.7
Q ss_pred ccccEEEEEEecCC---------CEEEE-------------------EeCCCcEEEEECCCCcee----eeeCCCCceEE
Q 009373 157 HTEAVLTVFVLASA---------KLLFT-------------------SGYDSIVRMWHLEDGFSI----ASSKPLGCTIR 204 (536)
Q Consensus 157 h~~~V~~v~~~~~~---------~~l~s-------------------gs~dg~v~iwd~~~~~~~----~~~~~~~~~v~ 204 (536)
+.+.|.+|+|+|++ ++||+ |+.|++|+|||+.+++.. ..+..|...|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 67889999999876 56665 557899999999887642 33455666665
Q ss_pred EE--ecC------CCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE-eCCEEEEEecCCeE
Q 009373 205 AV--AAD------KKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL-DLTRIYSGSWDMTV 275 (536)
Q Consensus 205 ~~--~~~------~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~dg~i 275 (536)
++ +|+ +.+|++|+.||+|++||+.++....... .....+...+.+|.+.|++++| .++.|++|+.||+|
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~--~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV 289 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVF--KMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFV 289 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEE--ECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccc--eeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEE
Confidence 55 464 5799999999999999997653110000 0011234567899999999999 55799999999999
Q ss_pred EEEeCCCce-EeEeee-ccccEEEE--e--ecC-CEEEEec-CCcEEEEeCCCCcEEEEEcccccc--ceEEEEEeCCCC
Q 009373 276 RVWDRALLK-CLKVLR-HSDWVYGL--A--PHD-TTVASTS-GSDVYIWDTNSGCLLTVVNGAHVG--NTKSLARSHTGD 345 (536)
Q Consensus 276 ~iwd~~~~~-~~~~~~-~~~~v~~~--~--~~~-~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~--~i~~l~~~~~~~ 345 (536)
++||++++. ....+. |...|.++ . +++ .+|++++ |++|++||+++++.+..+. +|.. .|.+++|+|+++
T Consensus 290 ~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~-~~~~~~~v~~v~fsp~~~ 368 (524)
T 2j04_B 290 AEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTV-SRFRGSNLVPVVYCPQIY 368 (524)
T ss_dssp EEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEE-EECSCCSCCCEEEETTTT
T ss_pred EEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccc-cccccCcccceEeCCCcC
Confidence 999999764 334455 89999998 3 456 7889888 9999999999988766654 3543 588999999999
Q ss_pred EEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccC---------
Q 009373 346 FLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSG--------- 414 (536)
Q Consensus 346 ~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~--------- 414 (536)
.+++++.|++|++||++++ .++.++.+|.+.|++++|+| .+|++|+.||+|++||+.......
T Consensus 369 ~l~s~~~d~tv~lwd~~~~------~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~ 442 (524)
T 2j04_B 369 SYIYSDGASSLRAVPSRAA------FAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQK 442 (524)
T ss_dssp EEEEECSSSEEEEEETTCT------TCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CC
T ss_pred eEEEeCCCCcEEEEECccc------ccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCcccee
Confidence 9999999999999999987 55667789999999999987 689999999999999976431110
Q ss_pred -----CC--CCCCceeeEEe---------eCCCeeeeccccccEEEEEecCC-----EEEEecCCCeEEEEeCCc
Q 009373 415 -----RP--TSGKRVSRVIE---------VEPPQRMLHGFECNLLSVDIGAD-----RIVCGGEEGIVRIWNFSQ 468 (536)
Q Consensus 415 -----~~--~~~~~~~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~-----~l~sg~~Dg~i~vW~~~~ 468 (536)
.. ........+.. -......+.+|...|.+++|+++ .+|+|+.||.|+||++.-
T Consensus 443 ~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 443 SLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp CCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred eeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 00 00000000000 02234457788888888888876 899999999999999874
No 55
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.7e-34 Score=277.26 Aligned_cols=238 Identities=18% Similarity=0.212 Sum_probs=208.6
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCC------ceeeeeCCCCceEEEEe--cCCCEEEEEeCCCc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDG------FSIASSKPLGCTIRAVA--ADKKLLVAGGTDGF 221 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~------~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~ 221 (536)
....+..|...|.+++|+|++.+|++|+.|+.+++|++... .....+..|...+.++. +++..|++|+.||+
T Consensus 98 ~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~ 177 (354)
T 2pbi_B 98 KEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGT 177 (354)
T ss_dssp EEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSE
T ss_pred cceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCc
Confidence 46678889999999999999999999999999999998654 23455667877776654 88899999999999
Q ss_pred EEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE----eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEE
Q 009373 222 IHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL----DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVY 296 (536)
Q Consensus 222 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~----~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~ 296 (536)
|++||++++. ....+.+|...|.++++ +++.|++|+.||+|++||+++++++..+. |...|.
T Consensus 178 v~lwd~~~~~-------------~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~ 244 (354)
T 2pbi_B 178 CALWDVESGQ-------------LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVN 244 (354)
T ss_dssp EEEEETTTCC-------------EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred EEEEeCCCCe-------------EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeE
Confidence 9999997753 56678899999999998 34799999999999999999999988887 899999
Q ss_pred EEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEcc-ccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccce
Q 009373 297 GLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNG-AHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLL 372 (536)
Q Consensus 297 ~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~ 372 (536)
+++ |++.++++++ |++|++||+++++.+..+.. .+...+.+++|+|++.+|++|+.|+.|++||+.++ ..
T Consensus 245 ~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~------~~ 318 (354)
T 2pbi_B 245 SVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKG------SR 318 (354)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTC------SE
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCC------ce
Confidence 887 7899999998 89999999999988776642 23457899999999999999999999999999887 56
Q ss_pred eeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEE
Q 009373 373 VATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLID 406 (536)
Q Consensus 373 ~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd 406 (536)
+..+.+|.+.|++++|+| .+|++|+.||+|++|+
T Consensus 319 ~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 319 VSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 778889999999999987 6999999999999996
No 56
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=278.31 Aligned_cols=303 Identities=16% Similarity=0.201 Sum_probs=226.3
Q ss_pred hhccccCCccceeeeeCccccEEEEEEec-CCCEEEEEeCCCcEEEEECCCCceeeee-------------CCCCceEEE
Q 009373 140 FRSKTFLGRYSIDVLYGHTEAVLTVFVLA-SAKLLFTSGYDSIVRMWHLEDGFSIASS-------------KPLGCTIRA 205 (536)
Q Consensus 140 ~~~~~~~~~~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~dg~v~iwd~~~~~~~~~~-------------~~~~~~v~~ 205 (536)
.+.+.+........+.+|.+.|++++|+| ++++|++|+.||.|++||+.++.....+ .+|...|.+
T Consensus 25 ~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 104 (408)
T 4a11_B 25 RRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVET 104 (408)
T ss_dssp HHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEE
T ss_pred ceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEE
Confidence 34444444445778899999999999999 9999999999999999999988655443 257788877
Q ss_pred Ee--c-CCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE-----eCCEEEEEecCCeEEE
Q 009373 206 VA--A-DKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL-----DLTRIYSGSWDMTVRV 277 (536)
Q Consensus 206 ~~--~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-----~~~~l~s~s~dg~i~i 277 (536)
+. + ++.+|++++.||.|++||+.++. ... ...+...+.++.+ ++..+++++.||.|++
T Consensus 105 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (408)
T 4a11_B 105 VQWYPHDTGMFTSSSFDKTLKVWDTNTLQ-------------TAD-VFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQL 170 (408)
T ss_dssp EEECTTCTTCEEEEETTSEEEEEETTTTE-------------EEE-EEECSSCEEEEEECSSCSSCCEEEEEESSSSEEE
T ss_pred EEEccCCCcEEEEEeCCCeEEEeeCCCCc-------------cce-eccCCCceeeeEeecCCCCCcEEEEEcCCCeEEE
Confidence 66 6 67799999999999999997753 222 2347788999988 2348999999999999
Q ss_pred EeCCCceEeEeee-ccccEEEEe--ecCC-EEEEec-CCcEEEEeCCCCc-EEEEEc--------------cccccceEE
Q 009373 278 WDRALLKCLKVLR-HSDWVYGLA--PHDT-TVASTS-GSDVYIWDTNSGC-LLTVVN--------------GAHVGNTKS 337 (536)
Q Consensus 278 wd~~~~~~~~~~~-~~~~v~~~~--~~~~-~l~~~~-d~~i~i~d~~~~~-~~~~~~--------------~~~~~~i~~ 337 (536)
||+.+++.+..+. |...|.+++ |++. ++++++ |+.|++||++++. .+..+. .+|...|.+
T Consensus 171 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 250 (408)
T 4a11_B 171 CDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNG 250 (408)
T ss_dssp EESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEE
T ss_pred EeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeE
Confidence 9999999888887 889999987 6776 577777 8999999998875 333331 358889999
Q ss_pred EEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEc-CCeEEEEeCCCcEEEEECCcccccCCC
Q 009373 338 LARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFE-FPWLVSAAGDGKLSLIDVRKLLRSGRP 416 (536)
Q Consensus 338 l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~ 416 (536)
++|+|++++|++++.||.|++||+.++......................... ...+++++.|+.|++||+.++
T Consensus 251 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~------ 324 (408)
T 4a11_B 251 LCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG------ 324 (408)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC------
T ss_pred EEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC------
Confidence 9999999999999999999999999874211110000000111111222222 367888889999999999873
Q ss_pred CCCCceeeEEeeCCCeeeeccccccEEEEEecC--CEEEEecCCCeEEEEeCCchhhHHHH
Q 009373 417 TSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGA--DRIVCGGEEGIVRIWNFSQAFEIERR 475 (536)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~sg~~Dg~i~vW~~~~~~~~~~~ 475 (536)
.....+.+|...|.++.+++ .+|++|+.||.|++|++.+++.+...
T Consensus 325 -------------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 325 -------------EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDD 372 (408)
T ss_dssp -------------CEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------
T ss_pred -------------cceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCC
Confidence 33345667888887777665 49999999999999999998766543
No 57
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.1e-34 Score=274.93 Aligned_cols=251 Identities=20% Similarity=0.254 Sum_probs=205.5
Q ss_pred eeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCC--ceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEcc
Q 009373 153 VLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDG--FSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRAV 228 (536)
Q Consensus 153 ~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~~ 228 (536)
...+|.+.|.+++|+|++++|++|+.|++|++|++.++ +.+..+.+|...|.++. |++++|++|+.|++|++||+.
T Consensus 56 ~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~ 135 (345)
T 3fm0_A 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD 135 (345)
T ss_dssp ECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred eccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECC
Confidence 34789999999999999999999999999999999876 45778899998887665 899999999999999999997
Q ss_pred cCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceE--eEeee-ccccEEEEe--ec
Q 009373 229 EVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKC--LKVLR-HSDWVYGLA--PH 301 (536)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~--~~~~~-~~~~v~~~~--~~ 301 (536)
++. .......+.+|...|.+++| ++.+|++|+.|++|++||..+++. ...+. |...|.+++ |+
T Consensus 136 ~~~----------~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 205 (345)
T 3fm0_A 136 EED----------EYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPS 205 (345)
T ss_dssp TTS----------CEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTT
T ss_pred CCC----------CeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCC
Confidence 642 12345667889999999999 678999999999999999987753 34454 889999887 88
Q ss_pred CCEEEEec-CCcEEEEeCCCC---------------cEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCc
Q 009373 302 DTTVASTS-GSDVYIWDTNSG---------------CLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDC 365 (536)
Q Consensus 302 ~~~l~~~~-d~~i~i~d~~~~---------------~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~ 365 (536)
+++|++++ |++|++||.... +++..+...|...|++++|+|++..|++++.|+.|++|+.....
T Consensus 206 g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 206 GQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNS 285 (345)
T ss_dssp SSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTS
T ss_pred CCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCC
Confidence 99999988 899999996322 23445544588999999999999999999999999999987653
Q ss_pred ccccc---ceeeeccCCCCCeEEEEEcC---CeEEEEeCCCcEEEEECCccccc
Q 009373 366 TEANV---LLVATWIPHTGPVNSLAFEF---PWLVSAAGDGKLSLIDVRKLLRS 413 (536)
Q Consensus 366 ~~~~~---~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~ 413 (536)
..... .......+|...|++++|+| .+|++|+.||+|++|++.+.++.
T Consensus 286 ~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 286 DPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp CTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred CcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 22111 11234568999999999987 48999999999999999875443
No 58
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-33 Score=279.04 Aligned_cols=288 Identities=19% Similarity=0.204 Sum_probs=226.4
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCC-CCceEEEEe--cCCCEEEEEeCCCcEEEEEc
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKP-LGCTIRAVA--ADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~ 227 (536)
+....+|.+.+.+..+++++..+++++.|+.|++||+.+++....+.. |...|.++. +++.+|++|+.||.|++||+
T Consensus 84 ~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~ 163 (401)
T 4aez_A 84 VLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDV 163 (401)
T ss_dssp EEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEEC
Confidence 344457877755544444456788899999999999999988777655 666676654 89999999999999999999
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCC-CceEeEeee-ccccEEEEe--ecCC
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRA-LLKCLKVLR-HSDWVYGLA--PHDT 303 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~-~~~~v~~~~--~~~~ 303 (536)
.++. ....+.+|...|.+++|+++.+++|+.||.|++||++ .......+. |...|.++. +++.
T Consensus 164 ~~~~-------------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 230 (401)
T 4aez_A 164 ESQT-------------KLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGL 230 (401)
T ss_dssp TTCC-------------EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS
T ss_pred cCCe-------------EEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCC
Confidence 7653 5667779999999999999999999999999999998 455566665 889999887 7889
Q ss_pred EEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCC-EEEEEc--CCCcEEEEEcccCccccccceeeeccCC
Q 009373 304 TVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGD-FLFTGG--EDGAIHMYEIINDCTEANVLLVATWIPH 379 (536)
Q Consensus 304 ~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~tg~--~dg~i~iwd~~~~~~~~~~~~~~~~~~h 379 (536)
++++++ |+.|++||+++++.+..+. +|...|.+++|+|++. ++++|+ .||.|++||+.++ ..+..+. +
T Consensus 231 ~l~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~------~~~~~~~-~ 302 (401)
T 4aez_A 231 QLASGGNDNVVQIWDARSSIPKFTKT-NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG------ARVNTVD-A 302 (401)
T ss_dssp EEEEEETTSCEEEEETTCSSEEEEEC-CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC------CEEEEEE-C
T ss_pred EEEEEeCCCeEEEccCCCCCccEEec-CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC------CEEEEEe-C
Confidence 999988 8999999999999988885 6999999999999774 566654 7999999999988 4555553 6
Q ss_pred CCCeEEEEEcC--CeEEEE--eCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecC--CEEE
Q 009373 380 TGPVNSLAFEF--PWLVSA--AGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGA--DRIV 453 (536)
Q Consensus 380 ~~~v~~l~~~~--~~l~s~--s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~ 453 (536)
...|.+++|+| .+++++ +.||.|++||+.+.... ....+.+|...|.++.+++ .+|+
T Consensus 303 ~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~-----------------~~~~~~~h~~~v~~~~~s~dg~~l~ 365 (401)
T 4aez_A 303 GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLT-----------------KQVDIPAHDTRVLYSALSPDGRILS 365 (401)
T ss_dssp SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEE-----------------EEEEEECCSSCCCEEEECTTSSEEE
T ss_pred CCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccce-----------------eEEEecCCCCCEEEEEECCCCCEEE
Confidence 67899999986 678874 48999999999763211 1112456777777777654 5999
Q ss_pred EecCCCeEEEEeCCchhhHHHHH
Q 009373 454 CGGEEGIVRIWNFSQAFEIERRA 476 (536)
Q Consensus 454 sg~~Dg~i~vW~~~~~~~~~~~~ 476 (536)
+++.||.|++|++.+++.+....
T Consensus 366 s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 366 TAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp EECTTSEEEEEECCC--------
T ss_pred EEeCCCcEEEEECCCCccccccc
Confidence 99999999999999988776543
No 59
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=7.8e-34 Score=273.11 Aligned_cols=304 Identities=18% Similarity=0.249 Sum_probs=243.8
Q ss_pred ccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEE--ecCCCEEEEEeCCCcEEEEEcccCccce
Q 009373 157 HTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAV--AADKKLLVAGGTDGFIHCWRAVEVLPHL 234 (536)
Q Consensus 157 h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~--~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 234 (536)
|.++|.+++|+|+|++++++..++.+.+|............+|...|.++ ++++++|++++ ||.|++||+.++..
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~-- 84 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN-- 84 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC--
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc--
Confidence 56789999999999999999888887777766555554455777766555 58999999999 99999999976531
Q ss_pred ecccCcccccceEEee--CCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCce--EeEeee-ccccEEEEe--ecCCEE
Q 009373 235 FDISGSEKQNTQFRLW--EHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLK--CLKVLR-HSDWVYGLA--PHDTTV 305 (536)
Q Consensus 235 ~~~~~~~~~~~~~~~~--~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~--~~~~~~-~~~~v~~~~--~~~~~l 305 (536)
......+. +|...|.+++| ++++|++++.||.|++||+.+++ ....+. |...|.++. ++++++
T Consensus 85 --------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 156 (337)
T 1gxr_A 85 --------KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVC 156 (337)
T ss_dssp --------CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEE
T ss_pred --------eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEE
Confidence 12223333 78999999999 67899999999999999999887 344444 778888877 788898
Q ss_pred EEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeE
Q 009373 306 ASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVN 384 (536)
Q Consensus 306 ~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~ 384 (536)
++++ ++.|++||+++++.+..+. +|...+.+++|+|++++|++++.||.|++||++++ ..+..+ .|...+.
T Consensus 157 ~~~~~dg~v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~------~~~~~~-~~~~~v~ 228 (337)
T 1gxr_A 157 FSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG------RQLQQH-DFTSQIF 228 (337)
T ss_dssp EEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT------EEEEEE-ECSSCEE
T ss_pred EEEeCCCcEEEEeCCCCceeeeee-cccCceEEEEECCCCCEEEEEecCCcEEEEECCCC------ceEeee-cCCCceE
Confidence 8887 8999999999999988885 59999999999999999999999999999999887 344443 4788999
Q ss_pred EEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecC--CEEEEecCCCe
Q 009373 385 SLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGA--DRIVCGGEEGI 460 (536)
Q Consensus 385 ~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~sg~~Dg~ 460 (536)
+++|+| .+|++++.||.|++||+++.. ...+.+|...+.++.+++ ++|++++.||.
T Consensus 229 ~~~~s~~~~~l~~~~~~~~i~~~~~~~~~--------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 288 (337)
T 1gxr_A 229 SLGYCPTGEWLAVGMESSNVEVLHVNKPD--------------------KYQLHLHESCVLSLKFAYCGKWFVSTGKDNL 288 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSSC--------------------EEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCC--------------------eEEEcCCccceeEEEECCCCCEEEEecCCCc
Confidence 999986 699999999999999998642 123456777787777764 59999999999
Q ss_pred EEEEeCCchhhHHHHHHhhhcccchhHHHhhhhccccccCCCCcceeEee
Q 009373 461 VRIWNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQCSVA 510 (536)
Q Consensus 461 i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 510 (536)
|++|++.++..+... .......+++|+|+|..+++++.+
T Consensus 289 i~~~~~~~~~~~~~~-----------~~~~~v~~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 289 LNAWRTPYGASIFQS-----------KESSSVLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp EEEEETTTCCEEEEE-----------ECSSCEEEEEECTTSCEEEEEETT
T ss_pred EEEEECCCCeEEEEe-----------cCCCcEEEEEECCCCCEEEEecCC
Confidence 999999988655211 112446789999999999887654
No 60
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.3e-33 Score=272.36 Aligned_cols=281 Identities=12% Similarity=0.102 Sum_probs=228.0
Q ss_pred eeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCc---eeeeeCCCCceEEEEe--cCCC-EEEEEeCCCcEEEE
Q 009373 152 DVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGF---SIASSKPLGCTIRAVA--ADKK-LLVAGGTDGFIHCW 225 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~---~~~~~~~~~~~v~~~~--~~~~-~l~sg~~dg~i~vw 225 (536)
....+|.+.|++++|+|++++|++|+.||.|++|++.++. ....+..|...+.++. ++++ +|++|+.||.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 3456899999999999999999999999999999998877 3444557777776655 8899 99999999999999
Q ss_pred Ec-ccCccceecccCcccccceEEeeC--CccCEEEEEEe-CCEEEEEecCCeEEEEeCCC---------ceEeEeeecc
Q 009373 226 RA-VEVLPHLFDISGSEKQNTQFRLWE--HEGPITSLALD-LTRIYSGSWDMTVRVWDRAL---------LKCLKVLRHS 292 (536)
Q Consensus 226 d~-~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~---------~~~~~~~~~~ 292 (536)
|+ .++. ...+.+ |...|.+++|. ++.|++++.|+.|++||+++ ++++..+.+.
T Consensus 85 d~~~~~~--------------~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 150 (342)
T 1yfq_A 85 DLIGSPS--------------FQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVK 150 (342)
T ss_dssp CSSSSSS--------------EEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSC
T ss_pred EeccCCc--------------eEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeC
Confidence 98 7652 355677 99999999996 78999999999999999988 7777777789
Q ss_pred ccEEEEeecCCEEEEec-CCcEEEEeCCC-CcE-EEEEccccccceEEEEEeC-CCCEEEEEcCCCcEEEEEcccCcccc
Q 009373 293 DWVYGLAPHDTTVASTS-GSDVYIWDTNS-GCL-LTVVNGAHVGNTKSLARSH-TGDFLFTGGEDGAIHMYEIINDCTEA 368 (536)
Q Consensus 293 ~~v~~~~~~~~~l~~~~-d~~i~i~d~~~-~~~-~~~~~~~~~~~i~~l~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~ 368 (536)
..|.+++..+..+++++ ++.|++||+++ +.. .......|...+.+++|+| +++++++|+.||.|++|+++......
T Consensus 151 ~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~ 230 (342)
T 1yfq_A 151 NKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY 230 (342)
T ss_dssp CCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCST
T ss_pred CceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccc
Confidence 99999996555577766 89999999998 543 3333346888999999999 99999999999999999997761111
Q ss_pred ccceeeeccCCCC---------CeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeecc
Q 009373 369 NVLLVATWIPHTG---------PVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHG 437 (536)
Q Consensus 369 ~~~~~~~~~~h~~---------~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (536)
.......+..|.. .|++++|+| .+|++++.||.|++||+.++.. ...+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-------------------~~~~~~ 291 (342)
T 1yfq_A 231 NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK-------------------IKNFAK 291 (342)
T ss_dssp TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE-------------------EEECCC
T ss_pred ccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH-------------------hhhhhc
Confidence 1134455556644 999999986 7899999999999999987422 233556
Q ss_pred c-cccEEEEEecCCEEEEecCCCe-EEEEe
Q 009373 438 F-ECNLLSVDIGADRIVCGGEEGI-VRIWN 465 (536)
Q Consensus 438 ~-~~~v~~~~~~~~~l~sg~~Dg~-i~vW~ 465 (536)
| ...|.++.+++++|++|+.||. .+.|.
T Consensus 292 ~h~~~v~~~~~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 292 FNEDSVVKIACSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp CSSSEEEEEEECSSEEEEEEECTHHHHCSS
T ss_pred ccCCCceEecCCCCeEEEEecCCccccccc
Confidence 6 7888888888889999999998 44444
No 61
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-34 Score=272.79 Aligned_cols=288 Identities=19% Similarity=0.184 Sum_probs=214.5
Q ss_pred CCceeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEe-eC-CccCEEEEEE--eCC
Q 009373 189 DGFSIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRL-WE-HEGPITSLAL--DLT 264 (536)
Q Consensus 189 ~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~v~~l~~--~~~ 264 (536)
+.+.+..+.+|...|.++.+++.+|++|+.|++|++||+.++. ......+ .+ |.+.|.+++| +++
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~-----------~~~~~~~~~~~h~~~v~~v~~sp~~~ 71 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDD-----------FTLIDVLDETAHKKAIRSVAWRPHTS 71 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSC-----------CEEEEEECTTCCCSCEEEEEECTTSS
T ss_pred ccccceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCC-----------eEEEEEEecCCccCCEEEEEECCCCC
Confidence 4566788899999999998777799999999999999987642 1122333 34 9999999999 678
Q ss_pred EEEEEecCCeEEEEeCCC-------ceEeEeee-ccccEEEEe--ecCCEEEEec-CCcEEEEeCCCC----cEEEEEcc
Q 009373 265 RIYSGSWDMTVRVWDRAL-------LKCLKVLR-HSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSG----CLLTVVNG 329 (536)
Q Consensus 265 ~l~s~s~dg~i~iwd~~~-------~~~~~~~~-~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~----~~~~~~~~ 329 (536)
+|++|+.|++|++||+.. .+....+. |...|.+++ |++++|++++ |++|++||++.. +.+..+.
T Consensus 72 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~- 150 (330)
T 2hes_X 72 LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ- 150 (330)
T ss_dssp EEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC-
T ss_pred EEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec-
Confidence 999999999999999853 34555555 889999887 8899999998 999999999532 4455564
Q ss_pred ccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCC----eEEEEeCCCcEEEE
Q 009373 330 AHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFP----WLVSAAGDGKLSLI 405 (536)
Q Consensus 330 ~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~----~l~s~s~dg~i~vw 405 (536)
+|...|.+++|+|++.+|++|+.|++|++||...+. ..++..+.+|.+.|.+++|+|. +|++|+.|++|++|
T Consensus 151 ~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw 226 (330)
T 2hes_X 151 EHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDD----WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVW 226 (330)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTE----EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCC----eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEE
Confidence 699999999999999999999999999999987652 1467788999999999999873 79999999999999
Q ss_pred ECCcccccCCCCCCCceeeEEeeCCCeeeecc-ccccEEEEEecCC-EEEEecCCCeEEEEeCCchhh--HHHHHHhhhc
Q 009373 406 DVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHG-FECNLLSVDIGAD-RIVCGGEEGIVRIWNFSQAFE--IERRARALRG 481 (536)
Q Consensus 406 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~-~l~sg~~Dg~i~vW~~~~~~~--~~~~~~~~~~ 481 (536)
|+++..... . .. ......+.+ |...|.+++++++ +|++|+.||.|++|+..++.. ....
T Consensus 227 ~~~~~~~~~-----~--~~----~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~------ 289 (330)
T 2hes_X 227 KYMGDDEDD-----Q--QE----WVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKR------ 289 (330)
T ss_dssp EEEEECTTS-----C--EE----EEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEE------
T ss_pred EecCCCccc-----c--ce----eEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEecc------
Confidence 997642110 0 00 011122333 7788999988765 899999999999999876521 1000
Q ss_pred ccchhHHHh-hhhcccccc--CCCCcceeEeecc
Q 009373 482 IRLENRMRR-RKLQTEMSS--KGGRTDQCSVAAK 512 (536)
Q Consensus 482 ~~~~~~~~~-~~~~~~~~~--~g~~~~~~~~~~~ 512 (536)
...... ....++|+| +|..+++++.+..
T Consensus 290 ---~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~ 320 (330)
T 2hes_X 290 ---ALCHGVYEINVVKWLELNGKTILATGGDDGI 320 (330)
T ss_dssp ---SCTTTTSCEEEEEEC-----CCEEEEETTSE
T ss_pred ---ccccccceEEEEEEecCCCceEEEEecCCCc
Confidence 001111 456889999 6888998876544
No 62
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.4e-32 Score=277.04 Aligned_cols=297 Identities=21% Similarity=0.301 Sum_probs=237.6
Q ss_pred hhhccccCCccceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe----cCCCEEE
Q 009373 139 EFRSKTFLGRYSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA----ADKKLLV 214 (536)
Q Consensus 139 ~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~----~~~~~l~ 214 (536)
.++.+.......+..+.+|.+.|++++|+|++ +|++|+.||+|++||+.+++.+..+.+|...|.++. +++.+++
T Consensus 143 ~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~ 221 (464)
T 3v7d_B 143 MIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIV 221 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEE
T ss_pred cEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEE
Confidence 34455555556788999999999999999887 999999999999999999999999999999887765 4678999
Q ss_pred EEeCCCcEEEEEcccCccceec----------ccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCce
Q 009373 215 AGGTDGFIHCWRAVEVLPHLFD----------ISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLK 284 (536)
Q Consensus 215 sg~~dg~i~vwd~~~~~~~~~~----------~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~ 284 (536)
+|+.||+|++||+.++...... ............+.+|...|.++..+++++++|+.||.|++||+.+++
T Consensus 222 s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 301 (464)
T 3v7d_B 222 TGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK 301 (464)
T ss_dssp EEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE
T ss_pred EEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999999999876422110 000111123567789999999999999999999999999999999999
Q ss_pred EeEeee-ccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEE
Q 009373 285 CLKVLR-HSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYE 360 (536)
Q Consensus 285 ~~~~~~-~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd 360 (536)
++..+. |...|.++. +++..+++++ |+.|++||+++++.+..+. +|...|.+++++ +.+|++|+.||.|++||
T Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd 378 (464)
T 3v7d_B 302 CLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ-GHTALVGLLRLS--DKFLVSAAADGSIRGWD 378 (464)
T ss_dssp EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred EEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEe-CCCCcEEEEEEc--CCEEEEEeCCCcEEEEE
Confidence 998887 888998887 7888999888 8999999999999999986 699999999997 58999999999999999
Q ss_pred cccCccccccceeeeccCCCCCeEEEEEc--CCeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccc
Q 009373 361 IINDCTEANVLLVATWIPHTGPVNSLAFE--FPWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGF 438 (536)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (536)
+.+.. ..... .|...+..++|+ +.+|++|+ ||.|++||++++.... ....+|
T Consensus 379 ~~~~~------~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~------------------~~~~~~ 432 (464)
T 3v7d_B 379 ANDYS------RKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVH------------------ANILKD 432 (464)
T ss_dssp TTTCC------EEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEE------------------SCTTTT
T ss_pred CCCCc------eeeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEe------------------hhhccC
Confidence 98873 22222 255556666665 47888888 9999999998853221 123456
Q ss_pred cccEEEEEecCCE-EEEecCCCeEEEEe
Q 009373 439 ECNLLSVDIGADR-IVCGGEEGIVRIWN 465 (536)
Q Consensus 439 ~~~v~~~~~~~~~-l~sg~~Dg~i~vW~ 465 (536)
...|.+++++++. +++++.||.+.+|-
T Consensus 433 ~~~v~~v~~~~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 433 ADQIWSVNFKGKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp CSEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred CCcEEEEEecCCEEEEEEEeCCeEEEEE
Confidence 7889999999884 55556677665543
No 63
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.5e-33 Score=279.79 Aligned_cols=257 Identities=21% Similarity=0.317 Sum_probs=223.5
Q ss_pred hhccccCCccceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCC
Q 009373 140 FRSKTFLGRYSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTD 219 (536)
Q Consensus 140 ~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~d 219 (536)
++.+.......+..+.+|.+.|.+++| ++++|++|+.||+|++||+.+++.+..+.+|...+.++..+++.+++|+.|
T Consensus 155 i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~d 232 (435)
T 1p22_A 155 IKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKD 232 (435)
T ss_dssp EEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETT
T ss_pred EEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCC
Confidence 444444455567889999999999999 789999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEE
Q 009373 220 GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGL 298 (536)
Q Consensus 220 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~ 298 (536)
|.|++||+.++.. ......+.+|...|.+++++++++++|+.||.|++||+++++.+..+. |...|.++
T Consensus 233 g~i~vwd~~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~ 302 (435)
T 1p22_A 233 RSIAVWDMASPTD----------ITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL 302 (435)
T ss_dssp SCEEEEECSSSSC----------CEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred CcEEEEeCCCCCC----------ceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEE
Confidence 9999999977531 123356778999999999999999999999999999999999998888 88999999
Q ss_pred eecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcccc---ccceee
Q 009373 299 APHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEA---NVLLVA 374 (536)
Q Consensus 299 ~~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~---~~~~~~ 374 (536)
..++.++++++ |+.|++||+++++.+..+. +|...|.+++| ++.+|++|+.||.|++||+.++.... ...++.
T Consensus 303 ~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~ 379 (435)
T 1p22_A 303 QYRDRLVVSGSSDNTIRLWDIECGACLRVLE-GHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR 379 (435)
T ss_dssp EEETTEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEE
T ss_pred EeCCCEEEEEeCCCeEEEEECCCCCEEEEEe-CCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchhee
Confidence 99999999988 8999999999999999886 69999999999 78899999999999999997763211 112677
Q ss_pred eccCCCCCeEEEEEcCCeEEEEeCCCcEEEEECCccc
Q 009373 375 TWIPHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRKLL 411 (536)
Q Consensus 375 ~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~ 411 (536)
.+.+|.+.|++++|++.+|++|+.||.|++||+.+..
T Consensus 380 ~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 380 TLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp EECCCSSCCCCEEECSSCEEECCSSSEEEEEC-----
T ss_pred eccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCC
Confidence 8899999999999999999999999999999998753
No 64
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.6e-33 Score=273.84 Aligned_cols=231 Identities=22% Similarity=0.320 Sum_probs=199.1
Q ss_pred cccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEcccCcccee
Q 009373 158 TEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRAVEVLPHLF 235 (536)
Q Consensus 158 ~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 235 (536)
...|++++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.++. |++..|++|+.|++|++||+.++.
T Consensus 123 ~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~---- 198 (393)
T 1erj_A 123 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ---- 198 (393)
T ss_dssp CCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE----
T ss_pred ceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe----
Confidence 34599999999999999999999999999999999999999999887765 899999999999999999997753
Q ss_pred cccCcccccceEEeeCCccCEEEEEE---eCCEEEEEecCCeEEEEeCCCceEeEee--------eccccEEEEe--ecC
Q 009373 236 DISGSEKQNTQFRLWEHEGPITSLAL---DLTRIYSGSWDMTVRVWDRALLKCLKVL--------RHSDWVYGLA--PHD 302 (536)
Q Consensus 236 ~~~~~~~~~~~~~~~~h~~~v~~l~~---~~~~l~s~s~dg~i~iwd~~~~~~~~~~--------~~~~~v~~~~--~~~ 302 (536)
....+ .+...+.++++ ++.+|++|+.||+|++||+++++.+..+ .|...|.+++ +++
T Consensus 199 ---------~~~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g 268 (393)
T 1erj_A 199 ---------CSLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 268 (393)
T ss_dssp ---------EEEEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS
T ss_pred ---------eEEEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC
Confidence 22223 35677999998 5679999999999999999999887765 2778899887 789
Q ss_pred CEEEEec-CCcEEEEeCCCCc------------EEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccc
Q 009373 303 TTVASTS-GSDVYIWDTNSGC------------LLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEAN 369 (536)
Q Consensus 303 ~~l~~~~-d~~i~i~d~~~~~------------~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~ 369 (536)
+++++++ |+.|++||+++.. ....+. +|...|.+++|+|++.+|++|+.||.|++||+.++
T Consensus 269 ~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~----- 342 (393)
T 1erj_A 269 QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI-GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG----- 342 (393)
T ss_dssp SEEEEEETTSEEEEEEC---------------CEEEEEE-CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC-----
T ss_pred CEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEe-cccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC-----
Confidence 9999998 9999999997643 334443 69999999999999999999999999999999988
Q ss_pred cceeeeccCCCCCeEEEEEcC--------CeEEEEeCCCcEEEEECCc
Q 009373 370 VLLVATWIPHTGPVNSLAFEF--------PWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 370 ~~~~~~~~~h~~~v~~l~~~~--------~~l~s~s~dg~i~vwd~~~ 409 (536)
.++..+.+|...|.+++|++ ++|++|+.||+|++|++..
T Consensus 343 -~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 343 -NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp -CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred -eEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 67788899999999999964 5899999999999999875
No 65
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.1e-35 Score=285.00 Aligned_cols=274 Identities=18% Similarity=0.245 Sum_probs=217.6
Q ss_pred HHHHhHhCCCCCCCCCCCCCCCCCCchhhhhhhhhhccccCCccceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEE
Q 009373 106 EFYCERWGLPIASAPLGAGFSDDKSWKELFVEREFRSKTFLGRYSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMW 185 (536)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~Wk~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iw 185 (536)
.+++..|.+......+.+.+...+.|.. ........+.+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 68 ~V~~~~~sp~~~~l~s~s~D~~v~iWd~------------~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQDGRLIVWNA------------LTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEET------------TTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred EEEEEEEcCCCCEEEEEeCCCeEEEEEC------------CCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 3455666543333333333333445543 2334578899999999999999999999999999999999
Q ss_pred ECCCCc-------eeeeeCCCCceEEEEe--cC-CCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEe-----e
Q 009373 186 HLEDGF-------SIASSKPLGCTIRAVA--AD-KKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRL-----W 250 (536)
Q Consensus 186 d~~~~~-------~~~~~~~~~~~v~~~~--~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-----~ 250 (536)
|+.+.. ....+.+|...+.++. |+ +..|++|+.|++|++||+.++. ....+ .
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~-------------~~~~~~~~~~~ 202 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ-------------RISIFGSEFPS 202 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC-------------EEEEECCCSSS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc-------------EEEEeecccCC
Confidence 997532 3455678888777655 44 5679999999999999998764 22222 5
Q ss_pred CCccCEEEEEE---eCCEEEEEecCCeEEEEeCC-CceEeEeee-ccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCc
Q 009373 251 EHEGPITSLAL---DLTRIYSGSWDMTVRVWDRA-LLKCLKVLR-HSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGC 322 (536)
Q Consensus 251 ~h~~~v~~l~~---~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~-~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~ 322 (536)
+|...|.++++ +++.|++|+.||+|++||++ ..+.+..+. |...|.+++ |++.+|++++ |++|++||+++++
T Consensus 203 ~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 203 GHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp SCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE
T ss_pred CCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc
Confidence 79999999999 56899999999999999997 456666666 899999887 8899999999 8999999999999
Q ss_pred EEEEEccc------cccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeec----cCCCCCeEEEEEcC--
Q 009373 323 LLTVVNGA------HVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATW----IPHTGPVNSLAFEF-- 390 (536)
Q Consensus 323 ~~~~~~~~------~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~----~~h~~~v~~l~~~~-- 390 (536)
.+..+... +...+++++|+|+|.+|++|+.||.|++||+..+ ..+..+ .+|.+.|++++|+|
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~------~~~~~~~~~~~~h~~~v~~l~~s~dg 356 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA------EMVLNLGTLQNSHEGRISCLGLSSDG 356 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC------CEEEEECCSCSSCCCCCCEEEECSSS
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC------ceEEEEecccCCCCCceEEEEECCCC
Confidence 88877531 1224899999999999999999999999999877 333333 68999999999986
Q ss_pred CeEEEEeCCCcEEEEECCcc
Q 009373 391 PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 391 ~~l~s~s~dg~i~vwd~~~~ 410 (536)
.+|++|+.||+|++|++...
T Consensus 357 ~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 357 SALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp SEEEEECTTSCEEEEECCSS
T ss_pred CEEEEeeCCCCEEEEecCCC
Confidence 69999999999999998763
No 66
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.8e-34 Score=287.88 Aligned_cols=284 Identities=14% Similarity=0.057 Sum_probs=204.9
Q ss_pred eeeeeCccccEEEEEEec-CCCEEEEEeCCCcEEEEECCCCce--eeeeCCCCceEEEEe--c-CCCEEEEEeCCCcEEE
Q 009373 151 IDVLYGHTEAVLTVFVLA-SAKLLFTSGYDSIVRMWHLEDGFS--IASSKPLGCTIRAVA--A-DKKLLVAGGTDGFIHC 224 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~-~~~~l~sgs~dg~v~iwd~~~~~~--~~~~~~~~~~v~~~~--~-~~~~l~sg~~dg~i~v 224 (536)
.....+|...|+||+|+| ++++||+|+.||+|+|||+.++.. ...+.+|...|.++. | ++++|++|+.||+|++
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 456778999999999999 467999999999999999987754 445568888887765 4 5789999999999999
Q ss_pred EEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--
Q 009373 225 WRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA-- 299 (536)
Q Consensus 225 wd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~-- 299 (536)
||++++.. ........+...+.+++| ++.+|++|+.||.|++||++.. .+..+. |...|.+++
T Consensus 192 wd~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~ 259 (435)
T 4e54_B 192 QDFKGNIL-----------RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALN 259 (435)
T ss_dssp EETTSCEE-----------EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEEC
T ss_pred eeccCCce-----------eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeec
Confidence 99976421 111112234456778888 6789999999999999999754 444454 899999988
Q ss_pred ecCC-EEEEec-CCcEEEEeCCCCcEEEEE--ccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeee
Q 009373 300 PHDT-TVASTS-GSDVYIWDTNSGCLLTVV--NGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVAT 375 (536)
Q Consensus 300 ~~~~-~l~~~~-d~~i~i~d~~~~~~~~~~--~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~ 375 (536)
|++. ++++++ |+.|++||+++++....+ ..+|...|++++|+|+|.+|++|+.||.|++||+.++. ....
T Consensus 260 p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~------~~~~ 333 (435)
T 4e54_B 260 PCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD------CPLG 333 (435)
T ss_dssp TTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS------SEEE
T ss_pred CCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCc------cceE
Confidence 5554 677776 899999999987654333 23689999999999999999999999999999998873 3333
Q ss_pred ccCCCC------CeEEEEEcC--CeEEEEe------------CCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeee
Q 009373 376 WIPHTG------PVNSLAFEF--PWLVSAA------------GDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRML 435 (536)
Q Consensus 376 ~~~h~~------~v~~l~~~~--~~l~s~s------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (536)
+..|.. .+....|++ ..+++++ .++.|++||..++.... ...
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~------------------~l~ 395 (435)
T 4e54_B 334 LIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMC------------------QLY 395 (435)
T ss_dssp ECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEE------------------EEC
T ss_pred EecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEE------------------EEe
Confidence 333321 222334443 3444443 34679999998753221 112
Q ss_pred ccccccEE---EEEecCCEEEEecCCCeEEEEeCCchhh
Q 009373 436 HGFECNLL---SVDIGADRIVCGGEEGIVRIWNFSQAFE 471 (536)
Q Consensus 436 ~~~~~~v~---~~~~~~~~l~sg~~Dg~i~vW~~~~~~~ 471 (536)
.+|...|. .+++++.+|++|+ |+.|+||++++++.
T Consensus 396 ~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 396 DPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred CCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 34444444 3455667888876 88999999998753
No 67
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.6e-33 Score=263.55 Aligned_cols=240 Identities=22% Similarity=0.328 Sum_probs=208.1
Q ss_pred cceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEE
Q 009373 149 YSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWR 226 (536)
Q Consensus 149 ~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd 226 (536)
.....+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...+.++. |++++|++|+.||.|++||
T Consensus 56 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd 135 (312)
T 4ery_A 56 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 135 (312)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred ccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 35678899999999999999999999999999999999999999999999998887655 8899999999999999999
Q ss_pred cccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee--ccccEEEEe--e
Q 009373 227 AVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR--HSDWVYGLA--P 300 (536)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~--~ 300 (536)
+.++. ....+..|..+|.+++| ++.+|++++.||.|++||+++++.+..+. +...+..+. |
T Consensus 136 ~~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (312)
T 4ery_A 136 VKTGK-------------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 202 (312)
T ss_dssp TTTCC-------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT
T ss_pred CCCCE-------------EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECC
Confidence 97653 55677889999999999 67899999999999999999998887764 556676665 8
Q ss_pred cCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceE---EEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeec
Q 009373 301 HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTK---SLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATW 376 (536)
Q Consensus 301 ~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~---~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~ 376 (536)
+++++++++ |+.|++||+++++.+..+. +|..... .....+++.+|++|+.||.|++||+.++ ..+..+
T Consensus 203 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~------~~~~~~ 275 (312)
T 4ery_A 203 NGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK------EIVQKL 275 (312)
T ss_dssp TSSEEEEEETTTEEEEEETTTTEEEEEEC-SSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC------CEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEE-ecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc------hhhhhh
Confidence 899999888 8999999999999988885 4655432 2233467889999999999999999888 678888
Q ss_pred cCCCCCeEEEEEcC--CeEEEEe--CCCcEEEEECC
Q 009373 377 IPHTGPVNSLAFEF--PWLVSAA--GDGKLSLIDVR 408 (536)
Q Consensus 377 ~~h~~~v~~l~~~~--~~l~s~s--~dg~i~vwd~~ 408 (536)
.+|...|.+++|+| .+|++++ .|+.|++|+..
T Consensus 276 ~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 276 QGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred hccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 99999999999987 6888887 69999999864
No 68
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.3e-32 Score=271.44 Aligned_cols=273 Identities=20% Similarity=0.268 Sum_probs=219.1
Q ss_pred cEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeee--CCCCceEEEE--ecCCCEEEEEeCCCcEEEEEcccCcccee
Q 009373 160 AVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASS--KPLGCTIRAV--AADKKLLVAGGTDGFIHCWRAVEVLPHLF 235 (536)
Q Consensus 160 ~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~--~~~~~~v~~~--~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 235 (536)
.+..|+|+++ ++|++|. |++|+|||+.+|+....+ .+|...|.++ +|+|++|++|+.||+|++||+.++.
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~---- 180 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK---- 180 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE----
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc----
Confidence 3577999974 6787775 999999999999887765 4666667655 5899999999999999999997753
Q ss_pred cccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCce-EeEeee-ccccEEEEe--ecCCEEEEec-C
Q 009373 236 DISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLK-CLKVLR-HSDWVYGLA--PHDTTVASTS-G 310 (536)
Q Consensus 236 ~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~-~~~~v~~~~--~~~~~l~~~~-d 310 (536)
....+.+|...+.++++++..|++|+.|+.+++||..... .+..+. |...+..+. +++.++++++ |
T Consensus 181 ---------~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D 251 (420)
T 4gga_A 181 ---------RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND 251 (420)
T ss_dssp ---------EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred ---------EEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeecc
Confidence 5677889999999999999999999999999999988644 344555 888888776 8899999888 8
Q ss_pred CcEEEEeCCCCcE----EEEEccccccceEEEEEeCCCC-EEEE--EcCCCcEEEEEcccCccccccceeeeccCCCCCe
Q 009373 311 SDVYIWDTNSGCL----LTVVNGAHVGNTKSLARSHTGD-FLFT--GGEDGAIHMYEIINDCTEANVLLVATWIPHTGPV 383 (536)
Q Consensus 311 ~~i~i~d~~~~~~----~~~~~~~~~~~i~~l~~~~~~~-~l~t--g~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v 383 (536)
+.+++||..+++. +... ..|...|.+++|+|.+. ++++ |+.|++|++||+.++ .+...+.. ...+
T Consensus 252 ~~v~i~~~~~~~~~~~~~~~~-~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~------~~~~~~~~-~~~v 323 (420)
T 4gga_A 252 NLVNVWPSAPGEGGWVPLQTF-TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG------ACLSAVDA-HSQV 323 (420)
T ss_dssp SCEEEEESSCCSSCSCCSEEE-CCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT------EEEEEEEC-SSCE
T ss_pred ccceEEeeccccccceeeeee-cccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc------ccceeecc-ccce
Confidence 9999999988753 3344 36889999999999765 4444 468999999999988 55555554 4578
Q ss_pred EEEEEcC--CeEEEEe--CCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--EEEEecC
Q 009373 384 NSLAFEF--PWLVSAA--GDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RIVCGGE 457 (536)
Q Consensus 384 ~~l~~~~--~~l~s~s--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~sg~~ 457 (536)
.++.|++ ..+++++ .||.|+|||+.++ .....+.+|...|.+++++++ +|+|||.
T Consensus 324 ~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~-------------------~~v~~l~gH~~~V~~l~~spdg~~l~S~s~ 384 (420)
T 4gga_A 324 CSILWSPHYKELISGHGFAQNQLVIWKYPTM-------------------AKVAELKGHTSRVLSLTMSPDGATVASAAA 384 (420)
T ss_dssp EEEEEETTTTEEEEEECTTTCCEEEEETTTC-------------------CEEEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred eeeeecCCCCeEEEEEecCCCEEEEEECCCC-------------------cEEEEEcCCCCCEEEEEEcCCCCEEEEEec
Confidence 8888875 5666655 6999999999874 334557889999999888654 9999999
Q ss_pred CCeEEEEeCCchhhHHH
Q 009373 458 EGIVRIWNFSQAFEIER 474 (536)
Q Consensus 458 Dg~i~vW~~~~~~~~~~ 474 (536)
||+|+|||+.+.....+
T Consensus 385 D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 385 DETLRLWRCFELDPARR 401 (420)
T ss_dssp TTEEEEECCSCSSCC--
T ss_pred CCeEEEEECCCCCccch
Confidence 99999999987654443
No 69
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-33 Score=299.34 Aligned_cols=238 Identities=12% Similarity=0.051 Sum_probs=184.3
Q ss_pred eeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEE--ecCCCEEEEEeCCCcEEEEEccc
Q 009373 152 DVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAV--AADKKLLVAGGTDGFIHCWRAVE 229 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~--~~~~~~l~sg~~dg~i~vwd~~~ 229 (536)
....||.+.|++++|+|++++||+|+.||+|+||+..+++....+. |...|.++ ++ +++|++++.|++|++||+.+
T Consensus 11 ~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~ 88 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS 88 (902)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTT
T ss_pred ccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCC
Confidence 3456999999999999999999999999999999998877665543 56666655 47 77999999999999999977
Q ss_pred CccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeE-----------eee-ccccE
Q 009373 230 VLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLK-----------VLR-HSDWV 295 (536)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~-----------~~~-~~~~v 295 (536)
+. ....+. |.+.|++++| +++++++|+.||+|++||+.+++... .+. |...|
T Consensus 89 ~~-------------~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V 154 (902)
T 2oaj_A 89 QK-------------VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPI 154 (902)
T ss_dssp CS-------------EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCC
T ss_pred Cc-------------EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCe
Confidence 53 333443 6789999999 77899999999999999999887641 112 77889
Q ss_pred EEEe--ec-CCEEEEec-CCcEEEEeCCCCcEEEEEcc-----------------ccccceEEEEEeCCCCEEEEEcCCC
Q 009373 296 YGLA--PH-DTTVASTS-GSDVYIWDTNSGCLLTVVNG-----------------AHVGNTKSLARSHTGDFLFTGGEDG 354 (536)
Q Consensus 296 ~~~~--~~-~~~l~~~~-d~~i~i~d~~~~~~~~~~~~-----------------~~~~~i~~l~~~~~~~~l~tg~~dg 354 (536)
.+++ |+ +..+++++ |+.| +||+++++.+..+.. +|...|++++|+|+|.+|++|+.||
T Consensus 155 ~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg 233 (902)
T 2oaj_A 155 VSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN 233 (902)
T ss_dssp CEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC
T ss_pred EEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC
Confidence 9888 42 35777777 8999 999999998887752 1357799999999999999999999
Q ss_pred cEEEEEcccCccccccceeeecc-------------CCCCCeEEEEEc----C---CeEEEEeCC-----CcEEEEEC
Q 009373 355 AIHMYEIINDCTEANVLLVATWI-------------PHTGPVNSLAFE----F---PWLVSAAGD-----GKLSLIDV 407 (536)
Q Consensus 355 ~i~iwd~~~~~~~~~~~~~~~~~-------------~h~~~v~~l~~~----~---~~l~s~s~d-----g~i~vwd~ 407 (536)
.|++||++++..... ..+.... .|..+|++++|+ | ..|++|+.| ..+.+|++
T Consensus 234 ~i~lWd~~~g~~~~~-r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 234 SLVFWDANSGHMIMA-RTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp CEEEEETTTCCEEEE-ECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred eEEEEECCCCcEEEE-EeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 999999988732100 0010011 245579999994 3 356777665 37888884
No 70
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.6e-33 Score=290.00 Aligned_cols=307 Identities=17% Similarity=0.219 Sum_probs=252.8
Q ss_pred cceeeeeCcccc-EEEEEEec--CCCEEEEEeCCCcEEEEECCCC--------ceeeeeCCCCceEEEEe--cCCCEEEE
Q 009373 149 YSIDVLYGHTEA-VLTVFVLA--SAKLLFTSGYDSIVRMWHLEDG--------FSIASSKPLGCTIRAVA--ADKKLLVA 215 (536)
Q Consensus 149 ~~~~~l~~h~~~-V~~v~~~~--~~~~l~sgs~dg~v~iwd~~~~--------~~~~~~~~~~~~v~~~~--~~~~~l~s 215 (536)
.....+.+|.+. |++++|+| ++++|++|+.||+|++||+.++ ..+..+..|...+.++. |++++|++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 567899999999 99999999 9999999999999999999755 66777788888777665 89999999
Q ss_pred EeCC----CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCC-EEEEEecCCeEEEEeCCCceEeEe
Q 009373 216 GGTD----GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLT-RIYSGSWDMTVRVWDRALLKCLKV 288 (536)
Q Consensus 216 g~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~-~l~s~s~dg~i~iwd~~~~~~~~~ 288 (536)
++.+ +.|.+||. + .....+.+|...|.+++| ++. .+++++.|+.|++||+.+++.+..
T Consensus 134 ~~~~~~~~~~v~~~d~--~-------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~ 198 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDS--G-------------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSAS 198 (615)
T ss_dssp EECCSSCSEEEEETTT--C-------------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEE
T ss_pred eccCCCCccEEEEEEC--C-------------CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeee
Confidence 9988 78888883 2 256677899999999999 444 899999999999999999999988
Q ss_pred ee-ccc---cEEEEe--ec-CCEEEEec-CCcEEEEeCCCCcEEEEEcc---ccccceEEEEEeCCCCEEEEEcCCCcEE
Q 009373 289 LR-HSD---WVYGLA--PH-DTTVASTS-GSDVYIWDTNSGCLLTVVNG---AHVGNTKSLARSHTGDFLFTGGEDGAIH 357 (536)
Q Consensus 289 ~~-~~~---~v~~~~--~~-~~~l~~~~-d~~i~i~d~~~~~~~~~~~~---~~~~~i~~l~~~~~~~~l~tg~~dg~i~ 357 (536)
+. |.. .|.++. |+ ++++++++ |+.|++||+++++.+..+.. +|...|.+++|+ ++.+|++++.||.|+
T Consensus 199 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~ 277 (615)
T 1pgu_A 199 DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIR 277 (615)
T ss_dssp ECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEE
T ss_pred ecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEE
Confidence 87 777 898887 77 88999888 89999999999999998844 699999999999 999999999999999
Q ss_pred EEEcccCccccccceeeeccCC----CCCeEEEEE-cCCeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCe
Q 009373 358 MYEIINDCTEANVLLVATWIPH----TGPVNSLAF-EFPWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQ 432 (536)
Q Consensus 358 iwd~~~~~~~~~~~~~~~~~~h----~~~v~~l~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (536)
+||++++ ..+..+..+ ...+.++.| ++.++++++.||.|++||+.+.. ..
T Consensus 278 ~wd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~-------------------~~ 332 (615)
T 1pgu_A 278 VWDVTTS------KCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDE-------------------VL 332 (615)
T ss_dssp EEETTTT------EEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEE-------------------EE
T ss_pred EEECCCC------cEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCc-------------------EE
Confidence 9999987 455555555 467888888 56899999999999999998732 23
Q ss_pred eeeccccccEEEEEecCCEEEEecCCCeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhhccccccCCCCcceeEeecc
Q 009373 433 RMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQCSVAAK 512 (536)
Q Consensus 433 ~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 512 (536)
..+.+|...+.++.+ ++ +++|+.||.|++|++. .+. ........+++| +++..+++++.+..
T Consensus 333 ~~~~~~~~~v~~~~~-~~-l~~~~~dg~i~~w~~~---~~~------------~~~~~~v~~~~~-~~~~~l~~~~~d~~ 394 (615)
T 1pgu_A 333 KTISGHNKGITALTV-NP-LISGSYDGRIMEWSSS---SMH------------QDHSNLIVSLDN-SKAQEYSSISWDDT 394 (615)
T ss_dssp EEECCCSSCEEEEET-TT-TEEEETTSCEEETTTT---EEE------------CCCCSCEEEEEC-CSTTCCEEEETTTE
T ss_pred EEEeCCCCCEEEEEe-cC-cEEECCCCeEEEEEch---hhc------------CcccCceEEEEE-CCCcEEEEEeCCCC
Confidence 345678888888888 88 8999999999999887 110 112234567777 56777777665544
Q ss_pred cC
Q 009373 513 KN 514 (536)
Q Consensus 513 ~~ 514 (536)
..
T Consensus 395 i~ 396 (615)
T 1pgu_A 395 LK 396 (615)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 71
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=9.7e-34 Score=269.98 Aligned_cols=243 Identities=15% Similarity=0.145 Sum_probs=191.7
Q ss_pred eeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCc--eeeeeCCCCceEEEEe--c--CCCEEEEEeCCCcEEEE
Q 009373 152 DVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGF--SIASSKPLGCTIRAVA--A--DKKLLVAGGTDGFIHCW 225 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~--~--~~~~l~sg~~dg~i~vw 225 (536)
..+.+|.+.|++++|+|+|++|++|+.|++|+|||+.++. .+..+.+|...|.++. + ++++|++|+.|++|++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 4677999999999999999999999999999999998874 4677889999998876 3 37899999999999999
Q ss_pred EcccCccceecccCcccccceEEeeCCccCEEEEEEe----CCEEEEEecCCeEEEEeCCCceE---eEeee-ccccEEE
Q 009373 226 RAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD----LTRIYSGSWDMTVRVWDRALLKC---LKVLR-HSDWVYG 297 (536)
Q Consensus 226 d~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~~l~s~s~dg~i~iwd~~~~~~---~~~~~-~~~~v~~ 297 (536)
|++++. ......+.+|.+.|.+++|. +.+|++|+.|++|++||+.++.. ...+. |...|.+
T Consensus 87 d~~~~~-----------~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~ 155 (316)
T 3bg1_A 87 REENGT-----------WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNA 155 (316)
T ss_dssp CCSSSC-----------CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCC
T ss_pred ECCCCc-----------ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcce
Confidence 987642 22455677899999999993 56899999999999999987632 22222 6677776
Q ss_pred Ee--ec-----------------CCEEEEec-CCcEEEEeCCCC---cEEEEEccccccceEEEEEeCCC----CEEEEE
Q 009373 298 LA--PH-----------------DTTVASTS-GSDVYIWDTNSG---CLLTVVNGAHVGNTKSLARSHTG----DFLFTG 350 (536)
Q Consensus 298 ~~--~~-----------------~~~l~~~~-d~~i~i~d~~~~---~~~~~~~~~~~~~i~~l~~~~~~----~~l~tg 350 (536)
+. |+ +.+|++++ |+.|++||++.+ +.+..+ .+|...|++++|+|++ .+|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~~~~las~ 234 (316)
T 3bg1_A 156 VSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL-EAHSDWVRDVAWAPSIGLPTSTIASC 234 (316)
T ss_dssp CEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC-BCCSSCEEEEECCCCSSCSCCEEEEE
T ss_pred EEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec-ccCCCceEEEEecCCCCCCCceEEEE
Confidence 65 43 35788888 899999999765 345555 4799999999999986 789999
Q ss_pred cCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECC
Q 009373 351 GEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVR 408 (536)
Q Consensus 351 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~ 408 (536)
+.||+|++||+.+..... .....+..|...|++++|+| .+|++++.||.|++|+..
T Consensus 235 s~D~~v~iw~~~~~~~~~--~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 235 SQDGRVFIWTCDDASSNT--WSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp ETTCEEEEEECSSTTCCC--CBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cCCCeEEEEEccCccccc--hhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999999999997632100 11233457889999999987 699999999999999975
No 72
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.5e-32 Score=266.17 Aligned_cols=299 Identities=13% Similarity=0.081 Sum_probs=214.8
Q ss_pred cceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEE-EEEeCCCcEEEEEc
Q 009373 149 YSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLL-VAGGTDGFIHCWRA 227 (536)
Q Consensus 149 ~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l-~sg~~dg~i~vwd~ 227 (536)
.++..+.+|.+.|++++|+|+|++|++|+.|+ +++|++++++.......+...+.++.++++.+ ++|+.|++|++||+
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp ---------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEET
T ss_pred CCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEEC
Confidence 35667789999999999999999999998775 78999998877766555556777888887776 67888899999999
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCc-eEeEeeeccccEEEEeecCCEEE
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALL-KCLKVLRHSDWVYGLAPHDTTVA 306 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~~l~ 306 (536)
.++. ....+. |...|.+++++++.++++. |+.|++||+.++ +.+..+.....+.++++ .+++
T Consensus 89 ~~~~-------------~~~~~~-~~~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la 151 (355)
T 3vu4_A 89 VKKQ-------------DVSRIK-VDAPVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLV 151 (355)
T ss_dssp TTTE-------------EEEEEE-CSSCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEE
T ss_pred CCCc-------------EEEEEE-CCCceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEeccCCceEEEEc--cEEE
Confidence 7763 333443 6779999999888777664 789999999988 66666655444555556 6666
Q ss_pred Ee--c-CCcEEEEeCCCCc---------------E-EEEEccccccceEEEEEeCCCCEEEEEcCCCc-EEEEEcccCcc
Q 009373 307 ST--S-GSDVYIWDTNSGC---------------L-LTVVNGAHVGNTKSLARSHTGDFLFTGGEDGA-IHMYEIINDCT 366 (536)
Q Consensus 307 ~~--~-d~~i~i~d~~~~~---------------~-~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~-i~iwd~~~~~~ 366 (536)
.+ + +|.|++||+.+++ + +..+. +|.+.|++++|+|+|.+|++|+.||+ |++||++++
T Consensus 152 ~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~-- 228 (355)
T 3vu4_A 152 YSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-AHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG-- 228 (355)
T ss_dssp EEESSCTTCEEEEECCC------------------CCEEEC-CCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC--
T ss_pred EeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE-ccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC--
Confidence 53 4 8999999999875 1 45554 79999999999999999999999998 999999988
Q ss_pred ccccceeeecc-C-CCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCce-eeEEe-eCC-Ceeee---c
Q 009373 367 EANVLLVATWI-P-HTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRV-SRVIE-VEP-PQRML---H 436 (536)
Q Consensus 367 ~~~~~~~~~~~-~-h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~-~~~~~-~~~-~~~~~---~ 436 (536)
..+..+. + |...|++++|+| .+|++++.|++|++||++.............. ..... ... ....+ .
T Consensus 229 ----~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (355)
T 3vu4_A 229 ----VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDK 304 (355)
T ss_dssp ----CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCT
T ss_pred ----cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCC
Confidence 6677777 5 999999999987 79999999999999999865321110000000 00000 000 00000 1
Q ss_pred cccccEEEEEecCCEEEEecCCCeEEEEeCCchhhH
Q 009373 437 GFECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 437 ~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~ 472 (536)
.....+.++.+++.++++++.||.+++|++..+...
T Consensus 305 ~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~ 340 (355)
T 3vu4_A 305 HVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDEM 340 (355)
T ss_dssp TCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETTT
T ss_pred CCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCC
Confidence 111245566666679999999999999999876543
No 73
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.2e-32 Score=261.97 Aligned_cols=246 Identities=16% Similarity=0.274 Sum_probs=197.9
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~ 227 (536)
....+.+|...|.+++|+|++.++++|+.|++|++||+.+++.+..+.+|...|.++. |++++|++|+.|++|++||+
T Consensus 68 ~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~ 147 (343)
T 2xzm_R 68 PHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNI 147 (343)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred ccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence 4678899999999999999999999999999999999999999999999998887665 89999999999999999998
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEEeC------------CEEEEEecCCeEEEEeCCCceEeEeee-cccc
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDL------------TRIYSGSWDMTVRVWDRALLKCLKVLR-HSDW 294 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~------------~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~ 294 (536)
.... ........+|...|.+++|.+ .+|++++.||+|++||. ..+....+. |...
T Consensus 148 ~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~ 215 (343)
T 2xzm_R 148 LGEC-----------KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESN 215 (343)
T ss_dssp SSCE-----------EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSC
T ss_pred cCCc-----------eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCcccc
Confidence 6321 001111236889999999933 57999999999999995 455555555 8899
Q ss_pred EEEEe--ecCCEEEEec-CCcEEEEeCCC-CcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcccc--
Q 009373 295 VYGLA--PHDTTVASTS-GSDVYIWDTNS-GCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEA-- 368 (536)
Q Consensus 295 v~~~~--~~~~~l~~~~-d~~i~i~d~~~-~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~-- 368 (536)
|.+++ |++++|++++ |+.|++||+.. ......+. +...|.+++|+|++.++++| .|+.|++||+.+.....
T Consensus 216 v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~--~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~ 292 (343)
T 2xzm_R 216 VNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD--AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVC 292 (343)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE--CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEE
T ss_pred ceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec--CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceE
Confidence 99887 8899999998 99999999944 44444443 55679999999999887655 57789999998763211
Q ss_pred ccc-----eeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcc
Q 009373 369 NVL-----LVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 369 ~~~-----~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~ 410 (536)
.+. ......+|...|++++|+| .+|++|+.||.|++|+++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 293 TIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp ECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred EeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 000 0111237889999999987 79999999999999998764
No 74
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-32 Score=267.36 Aligned_cols=284 Identities=14% Similarity=0.220 Sum_probs=227.8
Q ss_pred cceeeeeCccccEEEEEEecC---CCEEEEEeCCCcEEEEECCC-Ccee-eeeCCCCceEEEEe--cCCCEEEEEeCCCc
Q 009373 149 YSIDVLYGHTEAVLTVFVLAS---AKLLFTSGYDSIVRMWHLED-GFSI-ASSKPLGCTIRAVA--ADKKLLVAGGTDGF 221 (536)
Q Consensus 149 ~~~~~l~~h~~~V~~v~~~~~---~~~l~sgs~dg~v~iwd~~~-~~~~-~~~~~~~~~v~~~~--~~~~~l~sg~~dg~ 221 (536)
..+..+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+ +..+ ..+.+|...|.++. |++++|++|+.||.
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 357788999999999999999 59999999999999999997 5555 67778888887665 88999999999999
Q ss_pred EEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE----eCCEEEEEecCCeEEEEeCCCceEeEeeeccccEEE
Q 009373 222 IHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL----DLTRIYSGSWDMTVRVWDRALLKCLKVLRHSDWVYG 297 (536)
Q Consensus 222 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~----~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~ 297 (536)
|++||+.++. ...+.+|...|.+++| ++.+|++++.||.|++||+++++.+..+.....+.+
T Consensus 110 v~iwd~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 175 (368)
T 3mmy_A 110 AKMWDLSSNQ--------------AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYC 175 (368)
T ss_dssp EEEEETTTTE--------------EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEE
T ss_pred EEEEEcCCCC--------------ceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceE
Confidence 9999997652 3345679999999998 446799999999999999999999999887778888
Q ss_pred EeecCCEEEEec-CCcEEEEeCCCCcEEEE-EccccccceEEEEEeCCCCE----EEEEcCCCcEEEEEcccCccccccc
Q 009373 298 LAPHDTTVASTS-GSDVYIWDTNSGCLLTV-VNGAHVGNTKSLARSHTGDF----LFTGGEDGAIHMYEIINDCTEANVL 371 (536)
Q Consensus 298 ~~~~~~~l~~~~-d~~i~i~d~~~~~~~~~-~~~~~~~~i~~l~~~~~~~~----l~tg~~dg~i~iwd~~~~~~~~~~~ 371 (536)
+.+.+..++++. ++.+.+||++....... ....+...+.++.+.+++.. +++|+.||.|++||++.... ..
T Consensus 176 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~---~~ 252 (368)
T 3mmy_A 176 ADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP---AK 252 (368)
T ss_dssp EEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH---HH
T ss_pred EEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc---cc
Confidence 886666666666 89999999988754433 33334556677777666654 99999999999999987632 13
Q ss_pred eeeeccCCCC------------CeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeecc
Q 009373 372 LVATWIPHTG------------PVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHG 437 (536)
Q Consensus 372 ~~~~~~~h~~------------~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (536)
.+..+.+|.. +|++++|+| .+|++++.||.|++||++++. ....+.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~-------------------~~~~~~~ 313 (368)
T 3mmy_A 253 DNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART-------------------KLKTSEQ 313 (368)
T ss_dssp HSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE-------------------EEEECCC
T ss_pred cceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc-------------------EEEEecC
Confidence 4455566665 799999987 699999999999999998742 2234566
Q ss_pred ccccEEEEEecCC--EEEEecCCCeEEEEeCCc
Q 009373 438 FECNLLSVDIGAD--RIVCGGEEGIVRIWNFSQ 468 (536)
Q Consensus 438 ~~~~v~~~~~~~~--~l~sg~~Dg~i~vW~~~~ 468 (536)
|...+.++.++++ +|++|+.|+..+.|++..
T Consensus 314 ~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 314 LDQPISACCFNHNGNIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp CSSCEEEEEECTTSSCEEEEECCCSTTCGGGCC
T ss_pred CCCCceEEEECCCCCeEEEEecccccccccccC
Confidence 7778888877654 999999998766666543
No 75
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.4e-32 Score=257.20 Aligned_cols=267 Identities=19% Similarity=0.255 Sum_probs=214.9
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeee--CCCCceEEEE--ecCCCEEEEEeCCCcEEEEEcccCccceec
Q 009373 161 VLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASS--KPLGCTIRAV--AADKKLLVAGGTDGFIHCWRAVEVLPHLFD 236 (536)
Q Consensus 161 V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~--~~~~~~v~~~--~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 236 (536)
+.+|+|++++ +||+|. |++|+|||+++++.+..+ .+|...|.++ ++++++|++|+.||+|++||+++++
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~----- 100 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK----- 100 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-----
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce-----
Confidence 4679999875 777765 999999999999988766 4566667665 4899999999999999999997753
Q ss_pred ccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceE-eEeee-ccccEEEEe--ecCCEEEEec-CC
Q 009373 237 ISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKC-LKVLR-HSDWVYGLA--PHDTTVASTS-GS 311 (536)
Q Consensus 237 ~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~-~~~~~-~~~~v~~~~--~~~~~l~~~~-d~ 311 (536)
....+.+|...+.++.+++..+++++.++.+++|+...... +..+. |...+..+. ++++++++++ |+
T Consensus 101 --------~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 172 (318)
T 4ggc_A 101 --------RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN 172 (318)
T ss_dssp --------EEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred --------eEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc
Confidence 56778899999999999999999999999999999887643 34444 778887776 7888999888 89
Q ss_pred cEEEEeCCCCcEE----EEEccccccceEEEEEeCCCCE---EEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeE
Q 009373 312 DVYIWDTNSGCLL----TVVNGAHVGNTKSLARSHTGDF---LFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVN 384 (536)
Q Consensus 312 ~i~i~d~~~~~~~----~~~~~~~~~~i~~l~~~~~~~~---l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~ 384 (536)
.|++||+++++.. ... ..+.+.|.++.++|++.. +++++.++.|++||..... .. ....+...+.
T Consensus 173 ~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~------~~-~~~~~~~~v~ 244 (318)
T 4ggc_A 173 LVNVWPSAPGEGGWVPLQTF-TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA------CL-SAVDAHSQVC 244 (318)
T ss_dssp CEEEEESSCBTTBSCCSEEE-CCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC------EE-EEEECSSCEE
T ss_pred ceeEEECCCCcccccceeee-cccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc------cc-ccccceeeee
Confidence 9999999987532 222 357889999999997763 3467789999999988772 22 2345777899
Q ss_pred EEEEcC--CeEEEEe--CCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--EEEEecCC
Q 009373 385 SLAFEF--PWLVSAA--GDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RIVCGGEE 458 (536)
Q Consensus 385 ~l~~~~--~~l~s~s--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~sg~~D 458 (536)
.+.|.+ ..+++++ .|+.|++||++++ .....+.+|...|.+++++++ +|+|||.|
T Consensus 245 ~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~-------------------~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D 305 (318)
T 4ggc_A 245 SILWSPHYKELISGHGFAQNQLVIWKYPTM-------------------AKVAELKGHTSRVLSLTMSPDGATVASAAAD 305 (318)
T ss_dssp EEEEETTTTEEEEEECTTTCCEEEEETTTC-------------------CEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred eeeecccccceEEEEEcCCCEEEEEECCCC-------------------cEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 999976 5565544 7999999999874 334557889999999888755 99999999
Q ss_pred CeEEEEeCCch
Q 009373 459 GIVRIWNFSQA 469 (536)
Q Consensus 459 g~i~vW~~~~~ 469 (536)
|+|+|||+.+.
T Consensus 306 ~~v~iWd~~~~ 316 (318)
T 4ggc_A 306 ETLRLWRCFEL 316 (318)
T ss_dssp TEEEEECCSCC
T ss_pred CeEEEEECCCC
Confidence 99999999764
No 76
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=7.6e-32 Score=254.53 Aligned_cols=245 Identities=18% Similarity=0.213 Sum_probs=193.5
Q ss_pred eeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEe----CCEEE
Q 009373 194 ASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD----LTRIY 267 (536)
Q Consensus 194 ~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~~l~ 267 (536)
..+.+|...|.++. +++++|++|+.|++|++||+.+.. ......+.+|.++|.+++|. +++|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~-----------~~~~~~l~gH~~~V~~v~~s~~~~g~~l~ 71 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET-----------HKLIDTLTGHEGPVWRVDWAHPKFGTILA 71 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC-----------BCCCEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC-----------cEEEEEEccccCCeEEEEecCCCcCCEEE
Confidence 34678888886654 899999999999999999986431 23566788999999999992 67999
Q ss_pred EEecCCeEEEEeCCCce--EeEeee-ccccEEEEe--ec--CCEEEEec-CCcEEEEeCCCCcE--EEEEccccccceEE
Q 009373 268 SGSWDMTVRVWDRALLK--CLKVLR-HSDWVYGLA--PH--DTTVASTS-GSDVYIWDTNSGCL--LTVVNGAHVGNTKS 337 (536)
Q Consensus 268 s~s~dg~i~iwd~~~~~--~~~~~~-~~~~v~~~~--~~--~~~l~~~~-d~~i~i~d~~~~~~--~~~~~~~~~~~i~~ 337 (536)
+|+.|++|++||+.+++ .+..+. |...|.+++ |+ +.+|++++ |+.|++||++++.. ...+ .+|...|.+
T Consensus 72 s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~-~~h~~~v~~ 150 (297)
T 2pm7_B 72 SCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGVNS 150 (297)
T ss_dssp EEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEE-ECCSSCEEE
T ss_pred EEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeee-ecccCccce
Confidence 99999999999998874 344444 888999988 54 77888888 99999999987632 2333 469999999
Q ss_pred EEEeCC-------------CCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC-----CeEEEEeCC
Q 009373 338 LARSHT-------------GDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF-----PWLVSAAGD 399 (536)
Q Consensus 338 l~~~~~-------------~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~s~d 399 (536)
++|+|+ +++|++|+.|+.|++||+++... .......+.+|...|.+++|+| .+|++++.|
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~--~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D 228 (297)
T 2pm7_B 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ--TYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD 228 (297)
T ss_dssp EEECCCC------------CCEEEEEETTSCEEEEEEETTTT--EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCc--eEEEEEEecCCCCceEEEEECCCCCCceEEEEEECC
Confidence 999997 57999999999999999987631 1125567889999999999987 479999999
Q ss_pred CcEEEEECCcccccCCCCCCCceeeEEeeCCCeeee--ccccccEEEEEecC--CEEEEecCCCeEEEEeCCc
Q 009373 400 GKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRML--HGFECNLLSVDIGA--DRIVCGGEEGIVRIWNFSQ 468 (536)
Q Consensus 400 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~--~~l~sg~~Dg~i~vW~~~~ 468 (536)
++|++||+++..... ....+ .+|...+.++++++ ++|++++.||.|++|+...
T Consensus 229 ~~v~iWd~~~~~~~~----------------~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 229 RTCIIWTQDNEQGPW----------------KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SCEEEEEESSTTSCC----------------EEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CcEEEEEeCCCCCcc----------------ceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 999999987632110 00111 34566777776654 5999999999999999863
No 77
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.4e-31 Score=265.73 Aligned_cols=253 Identities=20% Similarity=0.232 Sum_probs=214.5
Q ss_pred hhhhccccCCccceee--eeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEE
Q 009373 138 REFRSKTFLGRYSIDV--LYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVA 215 (536)
Q Consensus 138 ~~~~~~~~~~~~~~~~--l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~s 215 (536)
..++.|........+. +.+|.+.|++|+|+|+|++|++|+.||+|+|||+.+++.+..+.+|...+.++++++..|++
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~s 204 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSS 204 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEE
Confidence 3344555443333444 45788999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEe----Eee
Q 009373 216 GGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCL----KVL 289 (536)
Q Consensus 216 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~----~~~ 289 (536)
|+.|+.+++||.... ......+.+|...+..+.+ ++..+++++.|+.+++||..+++.. ...
T Consensus 205 gs~d~~i~~~d~~~~------------~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~ 272 (420)
T 4gga_A 205 GSRSGHIHHHDVRVA------------EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTF 272 (420)
T ss_dssp EETTSEEEEEETTSS------------SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEE
T ss_pred EeCCCceeEeeeccc------------ceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeee
Confidence 999999999998664 2355678899999999999 7789999999999999999876532 222
Q ss_pred -eccccEEEEe--e-cCCEEEEe--c-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEc--CCCcEEEEE
Q 009373 290 -RHSDWVYGLA--P-HDTTVAST--S-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGG--EDGAIHMYE 360 (536)
Q Consensus 290 -~~~~~v~~~~--~-~~~~l~~~--~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~--~dg~i~iwd 360 (536)
.|...|.++. | .+.+++++ + |+.|++||+.+++....+. +...+.++.|+|+++.+++++ .||.|+|||
T Consensus 273 ~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd 350 (420)
T 4gga_A 273 TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVIWK 350 (420)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEEEE
T ss_pred cccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec--cccceeeeeecCCCCeEEEEEecCCCEEEEEE
Confidence 3788888887 4 34565543 3 7999999999999998885 556899999999999888765 799999999
Q ss_pred cccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcc
Q 009373 361 IINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~ 410 (536)
+.++ .++.++.+|.+.|++++|+| .+|++|+.||+|+|||+.+.
T Consensus 351 ~~~~------~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 351 YPTM------AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp TTTC------CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred CCCC------cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9988 78889999999999999986 69999999999999999764
No 78
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.7e-32 Score=290.54 Aligned_cols=328 Identities=13% Similarity=0.128 Sum_probs=250.7
Q ss_pred CCccceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEE
Q 009373 146 LGRYSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIH 223 (536)
Q Consensus 146 ~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~ 223 (536)
.....+..+.+|.++|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...+.++. |++..|++|+.||.|+
T Consensus 43 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 122 (814)
T 3mkq_A 43 ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVK 122 (814)
T ss_dssp TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred CCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEE
Confidence 34446789999999999999999999999999999999999999999999999988887665 8999999999999999
Q ss_pred EEEcccCccceecccCcccccceEEeeCCccCEEEEEEe---CCEEEEEecCCeEEEEeCCCceEeEeee--ccccEEEE
Q 009373 224 CWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD---LTRIYSGSWDMTVRVWDRALLKCLKVLR--HSDWVYGL 298 (536)
Q Consensus 224 vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~v~~~ 298 (536)
+||+.++ ......+.+|...|.+++|+ ++.+++++.||+|++||+.+++....+. +...+.++
T Consensus 123 vw~~~~~------------~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~ 190 (814)
T 3mkq_A 123 LWNWENN------------WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYV 190 (814)
T ss_dssp EEEGGGT------------SEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEE
T ss_pred EEECCCC------------ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEE
Confidence 9999764 23556677899999999994 4689999999999999998887777665 44677776
Q ss_pred e--e--cCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcccccccee
Q 009373 299 A--P--HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLV 373 (536)
Q Consensus 299 ~--~--~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~ 373 (536)
. | ++.++++++ ++.|++||+.+++.+..+. +|...|.+++|+|++.+|++|+.||.|++||+.++ ..+
T Consensus 191 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~------~~~ 263 (814)
T 3mkq_A 191 DYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE-GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY------KVE 263 (814)
T ss_dssp EECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC------SEE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC------cEE
Confidence 6 5 888999988 8999999999999988885 69999999999999999999999999999999887 677
Q ss_pred eeccCCCCCeEEEEEcCC---eEEEEeCCCcEEEEECCcccccCCCCCCCceee----------EE--------------
Q 009373 374 ATWIPHTGPVNSLAFEFP---WLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSR----------VI-------------- 426 (536)
Q Consensus 374 ~~~~~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~----------~~-------------- 426 (536)
..+..|...|.+++|+|+ .+++++.|+.+.+|++................. ..
T Consensus 264 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (814)
T 3mkq_A 264 KTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDE 343 (814)
T ss_dssp EEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSS
T ss_pred EEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCc
Confidence 888899999999999873 245555677799999875433222111110000 00
Q ss_pred eeCCCeeeeccccccE--EEEEecCCEEEEecCCCeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhhccccccCCCCc
Q 009373 427 EVEPPQRMLHGFECNL--LSVDIGADRIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSSKGGRT 504 (536)
Q Consensus 427 ~~~~~~~~~~~~~~~v--~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 504 (536)
...........+...+ .+++++++++++++ ||.+.+|++...... ......+++|+|+|..+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~~~---------------~~~~i~~~~~spdg~~l 407 (814)
T 3mkq_A 344 PLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWRNK---------------AFGKCQDFVWGPDSNSY 407 (814)
T ss_dssp CBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTEEE---------------EEEECSEEEECTTSSCE
T ss_pred cceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECcccccc---------------CCCceEEEEEeCCCCeE
Confidence 0001111122333333 44445555888887 889999997532110 01234567777777777
Q ss_pred ceeE
Q 009373 505 DQCS 508 (536)
Q Consensus 505 ~~~~ 508 (536)
+++.
T Consensus 408 a~~~ 411 (814)
T 3mkq_A 408 ALID 411 (814)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7654
No 79
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-32 Score=295.19 Aligned_cols=349 Identities=11% Similarity=0.080 Sum_probs=233.0
Q ss_pred eCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEcccCcc
Q 009373 155 YGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRAVEVLP 232 (536)
Q Consensus 155 ~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~~~~~~ 232 (536)
..|...|.+++|+| +++|++++.|++|++||+.+++.+..+. |...|.++. |++++|++|+.||+|++||+.++..
T Consensus 55 ~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 55 LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 35889999999999 8899999999999999999999888875 445666554 8999999999999999999987642
Q ss_pred ceecccCcccccceEEeeCCccCEEEEEEeC---CEEEEEecCCeEEEEeCCCceEeEeee-c-----------------
Q 009373 233 HLFDISGSEKQNTQFRLWEHEGPITSLALDL---TRIYSGSWDMTVRVWDRALLKCLKVLR-H----------------- 291 (536)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~-~----------------- 291 (536)
..+..... ......+.+|.++|.+++|++ ..+++|+.||+| +||+++++++..+. |
T Consensus 133 ~~~~i~~~--~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (902)
T 2oaj_A 133 SSFKLDNL--QKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEK 209 (902)
T ss_dssp EEEEECCH--HHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSC
T ss_pred ccceeccc--cccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccc
Confidence 11110000 000023467999999999954 589999999999 99999999888776 3
Q ss_pred -cccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEE--Ec--cc-------------cccceEEEEEeC----CC-C
Q 009373 292 -SDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTV--VN--GA-------------HVGNTKSLARSH----TG-D 345 (536)
Q Consensus 292 -~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~--~~--~~-------------~~~~i~~l~~~~----~~-~ 345 (536)
...|.+++ |++.+|++++ |+.|++||+++++++.. +. .. |...|++++|++ ++ .
T Consensus 210 h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ 289 (902)
T 2oaj_A 210 RTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTS 289 (902)
T ss_dssp BCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEE
T ss_pred cCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCE
Confidence 36788887 8899999998 89999999999987754 21 01 345799999954 32 4
Q ss_pred EEEEEcCC-----CcEEEEEc-----------------------------------------------------------
Q 009373 346 FLFTGGED-----GAIHMYEI----------------------------------------------------------- 361 (536)
Q Consensus 346 ~l~tg~~d-----g~i~iwd~----------------------------------------------------------- 361 (536)
+|++|+.| ..+.+|++
T Consensus 290 ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~ 369 (902)
T 2oaj_A 290 LLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILL 369 (902)
T ss_dssp EEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEE
T ss_pred EEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEE
Confidence 56666554 25666663
Q ss_pred ------------ccCccccc-cceeeeccCCCCCeEEE----------------------------------EEcC--Ce
Q 009373 362 ------------INDCTEAN-VLLVATWIPHTGPVNSL----------------------------------AFEF--PW 392 (536)
Q Consensus 362 ------------~~~~~~~~-~~~~~~~~~h~~~v~~l----------------------------------~~~~--~~ 392 (536)
.++..... ......+..|...|+++ +|+| ++
T Consensus 370 ~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~ 449 (902)
T 2oaj_A 370 ILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTA 449 (902)
T ss_dssp EETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEE
T ss_pred EcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcE
Confidence 11100000 00000112233444444 4444 68
Q ss_pred EEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecC--CEEEEecCCCeEEEEeCCchh
Q 009373 393 LVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGA--DRIVCGGEEGIVRIWNFSQAF 470 (536)
Q Consensus 393 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~sg~~Dg~i~vW~~~~~~ 470 (536)
|++|+.|++|++||+.++.... .... .. .+. .....+|...|.++++++ ++||+|+.||+|+||++.+++
T Consensus 450 laSgs~DgtVrlWd~~~g~~~~----~~~~-~~-~l~--~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~ 521 (902)
T 2oaj_A 450 FITGHSNGSVRIYDASHGDIQD----NASF-EV-NLS--RTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQ 521 (902)
T ss_dssp EEEEETTSEEEEEESSCCTTTT----TBCE-EE-EHH--HHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECC
T ss_pred EEEecCCCcEEEEECCCccccC----CceE-Ee-ech--hhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCcc
Confidence 9999999999999998752110 0000 00 000 000126777787777765 499999999999999998874
Q ss_pred hHHHH----HHh-------------------------------hhcccchhHHHhhhhccccccCCCCcceeEeecccCC
Q 009373 471 EIERR----ARA-------------------------------LRGIRLENRMRRRKLQTEMSSKGGRTDQCSVAAKKNP 515 (536)
Q Consensus 471 ~~~~~----~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 515 (536)
..... ... +............+.+++|+||| .+|+++.+.+...
T Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~l 600 (902)
T 2oaj_A 522 FYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLML 600 (902)
T ss_dssp C---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEE
T ss_pred ccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEE
Confidence 22110 000 00011112234567889999999 9999887666555
Q ss_pred cC
Q 009373 516 MN 517 (536)
Q Consensus 516 ~~ 517 (536)
++
T Consensus 601 wd 602 (902)
T 2oaj_A 601 ID 602 (902)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 80
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.8e-32 Score=263.20 Aligned_cols=292 Identities=15% Similarity=0.171 Sum_probs=207.5
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCC----ceeeeeCCCCceEEEEe--c--CCCEEEEEeCCCcE
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDG----FSIASSKPLGCTIRAVA--A--DKKLLVAGGTDGFI 222 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~--~--~~~~l~sg~~dg~i 222 (536)
...+.+|.+.|++++|+|++++|++|+.||.|++||+.++ +....+.+|...|.++. + ++.+|++|+.||.|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 4577899999999999999999999999999999999876 46677788999888776 5 58999999999999
Q ss_pred EEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--e--CCEEEEEecCCeEEEEeCCCceEeEeee--------
Q 009373 223 HCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--D--LTRIYSGSWDMTVRVWDRALLKCLKVLR-------- 290 (536)
Q Consensus 223 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------- 290 (536)
++||+.++.... ..........+.+|.+.|.+++| + +.+|++++.||.|++||+++++.+..+.
T Consensus 84 ~vwd~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 84 KLWEEDPDQEEC----SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp EEEEECTTSCTT----SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred EEEecCCCcccc----cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence 999997753210 00111356677889999999999 4 7799999999999999998876544332
Q ss_pred ------ccccEEEEe--ec---CCEEEEec-CCcEEEEeCCCCcE--EEEEccccccceEEEEEeCCC----CEEEEEcC
Q 009373 291 ------HSDWVYGLA--PH---DTTVASTS-GSDVYIWDTNSGCL--LTVVNGAHVGNTKSLARSHTG----DFLFTGGE 352 (536)
Q Consensus 291 ------~~~~v~~~~--~~---~~~l~~~~-d~~i~i~d~~~~~~--~~~~~~~~~~~i~~l~~~~~~----~~l~tg~~ 352 (536)
+...+.++. |+ +..+++++ ++.+.+|+...++. +..+ .+|...|++++|+|++ .+|++|+.
T Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 160 SIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKL-PGHKSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp SCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEEC-CCCCSCEEEEEECCCSSCSSEEEEEEET
T ss_pred ccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeec-CCCCcceeEEEECCCCCCcceEEEEEcC
Confidence 455667776 54 77888887 78888888877765 4444 3699999999999998 89999999
Q ss_pred CCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEE----eCCCcEEEEECCcccccCCCCCCCceeeEE
Q 009373 353 DGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSA----AGDGKLSLIDVRKLLRSGRPTSGKRVSRVI 426 (536)
Q Consensus 353 dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~----s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 426 (536)
||.|++||++... .......+...+......+ ..+..+ .....+.+|+...
T Consensus 239 dg~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 295 (351)
T 3f3f_A 239 DGRIRIFKITEKL------SPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQ----------------- 295 (351)
T ss_dssp TSCEEEEEEEECC---------------------------------------------CCSEE-----------------
T ss_pred CCeEEEEeCCCCc------CccccCCcccceeccCCCcccccccccccccccceeeeeccccc-----------------
Confidence 9999999998873 2222222222222222222 222222 2333444444333
Q ss_pred eeCCCeeeeccccccEEEEEecCC--EEEEecCCCeEEEEeCCchhhH
Q 009373 427 EVEPPQRMLHGFECNLLSVDIGAD--RIVCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 427 ~~~~~~~~~~~~~~~v~~~~~~~~--~l~sg~~Dg~i~vW~~~~~~~~ 472 (536)
......+.+|...|.++.++++ +|++|+.||.|++|++.++..+
T Consensus 296 --~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 296 --VELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp --EEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCE
T ss_pred --ccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcch
Confidence 1233456778888888887654 9999999999999999987544
No 81
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.3e-32 Score=261.47 Aligned_cols=290 Identities=18% Similarity=0.239 Sum_probs=223.2
Q ss_pred CCCceeeeeCCCCceEEEEe--cC-CCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--e
Q 009373 188 EDGFSIASSKPLGCTIRAVA--AD-KKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--D 262 (536)
Q Consensus 188 ~~~~~~~~~~~~~~~v~~~~--~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~ 262 (536)
++.....++++|...|.+++ |+ +++|+||+.||+|++||+.+... ....+...+.+|...|.+++| +
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~--------~~~~~~~~l~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET--------NYGIPQRALRGHSHFVSDVVISSD 97 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSS--------CSEEEEEEECCCSSCEEEEEECTT
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc--------ccceeeEEEeCCCCCEEEEEECCC
Confidence 33455668999999998876 65 67999999999999999976531 112345678899999999999 7
Q ss_pred CCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEE
Q 009373 263 LTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSL 338 (536)
Q Consensus 263 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l 338 (536)
+.+|++++.|+.|++|+........... +...+.... +.+..+++++ |+.+++||+...........+|...+..+
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~ 177 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCV 177 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEE
T ss_pred CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccce
Confidence 7899999999999999999888777766 444554444 7788888887 89999999988877666666799999999
Q ss_pred EEeCCC--CEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccC
Q 009373 339 ARSHTG--DFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSG 414 (536)
Q Consensus 339 ~~~~~~--~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~ 414 (536)
+|++++ .++++++.|+.|++||+++. ..+..+.+|.++|++++|+| .+|++|+.||.|++||+++....
T Consensus 178 ~~~~~~~~~~~~s~~~d~~i~i~d~~~~------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~- 250 (340)
T 4aow_A 178 RFSPNSSNPIIVSCGWDKLVKVWNLANC------KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL- 250 (340)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTTT------EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE-
T ss_pred EEccCCCCcEEEEEcCCCEEEEEECCCC------ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCcee-
Confidence 998865 57899999999999999988 67788899999999999986 69999999999999999874322
Q ss_pred CCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC-EEEEecCCCeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhh
Q 009373 415 RPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD-RIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLENRMRRRKL 493 (536)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (536)
..+.+ ...+.++.++++ ++++++.|+.|++||+.++..+......... .........+.
T Consensus 251 ------------------~~~~~-~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~h~~~v~ 310 (340)
T 4aow_A 251 ------------------YTLDG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVIS-TSSKAEPPQCT 310 (340)
T ss_dssp ------------------EEEEC-SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC--------CCCCCEE
T ss_pred ------------------eeecC-CceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEecccccee-eeccCCCCCEE
Confidence 11222 235666776665 7778888999999999876554322111000 00111234567
Q ss_pred ccccccCCCCcceeEeecc
Q 009373 494 QTEMSSKGGRTDQCSVAAK 512 (536)
Q Consensus 494 ~~~~~~~g~~~~~~~~~~~ 512 (536)
+++|+|+|+.+++++.+..
T Consensus 311 ~l~~s~dg~~l~sgs~Dg~ 329 (340)
T 4aow_A 311 SLAWSADGQTLFAGYTDNL 329 (340)
T ss_dssp EEEECTTSSEEEEEETTSC
T ss_pred EEEECCCCCEEEEEeCCCE
Confidence 8999999999998876543
No 82
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-31 Score=263.30 Aligned_cols=256 Identities=17% Similarity=0.154 Sum_probs=217.2
Q ss_pred hhccccCCccceeeeeC-ccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeC
Q 009373 140 FRSKTFLGRYSIDVLYG-HTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGT 218 (536)
Q Consensus 140 ~~~~~~~~~~~~~~l~~-h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~ 218 (536)
++.+..........+.. |...|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...+.++..+++.+++|+.
T Consensus 115 v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 194 (401)
T 4aez_A 115 VYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSR 194 (401)
T ss_dssp EEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEET
T ss_pred EEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcC
Confidence 34444433334445554 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccE
Q 009373 219 DGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWV 295 (536)
Q Consensus 219 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v 295 (536)
||.|++||+... ......+.+|.+.|.+++| ++..|++|+.||.|++||+.+++....+. |...|
T Consensus 195 dg~i~i~d~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v 262 (401)
T 4aez_A 195 SGAIHHHDVRIA------------NHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAV 262 (401)
T ss_dssp TSEEEEEETTSS------------SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCC
T ss_pred CCCEEEEecccC------------cceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceE
Confidence 999999999743 2356677899999999999 67899999999999999999998888876 88889
Q ss_pred EEEe--ecC-CEEEEec---CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEE--EcCCCcEEEEEcccCccc
Q 009373 296 YGLA--PHD-TTVASTS---GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFT--GGEDGAIHMYEIINDCTE 367 (536)
Q Consensus 296 ~~~~--~~~-~~l~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~t--g~~dg~i~iwd~~~~~~~ 367 (536)
.+++ |++ .++++++ |+.|++||+.+++.+..+. +...|.+++|+|++.++++ |+.||.|++||+.++..
T Consensus 263 ~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~- 339 (401)
T 4aez_A 263 KAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD--AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL- 339 (401)
T ss_dssp CEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE-
T ss_pred EEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe--CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc-
Confidence 8887 544 5667654 8999999999999998884 7788999999999999999 55899999999988632
Q ss_pred cccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCccccc
Q 009373 368 ANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRS 413 (536)
Q Consensus 368 ~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~ 413 (536)
.....+.+|...|.+++|+| .+|++++.||.|++||+.++...
T Consensus 340 ---~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 340 ---TKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp ---EEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred ---eeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 34455779999999999986 69999999999999999876433
No 83
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-31 Score=261.82 Aligned_cols=247 Identities=16% Similarity=0.139 Sum_probs=206.0
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECC--CCceeeeeCCCCceEEEEe--cC--CCEEEEEeCCCcEE
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLE--DGFSIASSKPLGCTIRAVA--AD--KKLLVAGGTDGFIH 223 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~--~~--~~~l~sg~~dg~i~ 223 (536)
.+..+.+|.+.|++++|+|++++|++|+.||.|++||+. +++.+..+.+|...|.++. ++ +.+|++|+.||.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 467899999999999999999999999999999999998 5677888999999988776 44 89999999999999
Q ss_pred EEEcccCccceecccCcccccceEEeeCCccCEEEEEE--e--CCEEEEEecCCeEEEEeCCCceEeE--ee-eccccEE
Q 009373 224 CWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--D--LTRIYSGSWDMTVRVWDRALLKCLK--VL-RHSDWVY 296 (536)
Q Consensus 224 vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~--~~~l~s~s~dg~i~iwd~~~~~~~~--~~-~~~~~v~ 296 (536)
+||+.++. ......+.+|...|.+++| + +..|++++.||.|++||+.++.... .+ .|...|.
T Consensus 83 iwd~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~ 151 (379)
T 3jrp_A 83 IWKEENGR-----------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVN 151 (379)
T ss_dssp EEEEETTE-----------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEE
T ss_pred EEEcCCCc-----------eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceE
Confidence 99997752 2255667789999999999 4 7799999999999999998874332 23 3888899
Q ss_pred EEe--e-------------cCCEEEEec-CCcEEEEeCCCCc----EEEEEccccccceEEEEEeCC---CCEEEEEcCC
Q 009373 297 GLA--P-------------HDTTVASTS-GSDVYIWDTNSGC----LLTVVNGAHVGNTKSLARSHT---GDFLFTGGED 353 (536)
Q Consensus 297 ~~~--~-------------~~~~l~~~~-d~~i~i~d~~~~~----~~~~~~~~~~~~i~~l~~~~~---~~~l~tg~~d 353 (536)
++. | ++.++++++ |+.|++||++++. ....+ .+|...|++++|+|+ +.+|++++.|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~~~l~s~~~d 230 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYLASVSQD 230 (379)
T ss_dssp EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEE-ecccCcEeEEEECCCCCCCCeEEEEeCC
Confidence 887 5 578888888 8999999998765 33444 369999999999999 8999999999
Q ss_pred CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCc
Q 009373 354 GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 354 g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~ 409 (536)
|.|++||++.+.... ...+.....|...|++++|+| .+|++++.||.|++||+..
T Consensus 231 g~i~iwd~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 231 RTCIIWTQDNEQGPW-KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SCEEEEEESSTTSCC-EEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CEEEEEeCCCCCccc-eeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 999999998863211 123334456899999999986 6999999999999999985
No 84
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.7e-31 Score=250.14 Aligned_cols=238 Identities=21% Similarity=0.246 Sum_probs=204.7
Q ss_pred eeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcccCcc
Q 009373 153 VLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLP 232 (536)
Q Consensus 153 ~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~ 232 (536)
.+.+|...|++++|+|++++|++|+.||+|++||+++++.+..+.+|...+.++++++..+++|+.++.+++|+....
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~-- 139 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVA-- 139 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSS--
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCC--
Confidence 345788999999999999999999999999999999999999999999999999999999999999999999998665
Q ss_pred ceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEe-----eeccccEEEEe--ec-C
Q 009373 233 HLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKV-----LRHSDWVYGLA--PH-D 302 (536)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~-----~~~~~~v~~~~--~~-~ 302 (536)
......+.+|...+..+.+ ++.++++++.||+|++||+.+++.... ..+...|.++. +. +
T Consensus 140 ----------~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 209 (318)
T 4ggc_A 140 ----------EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS 209 (318)
T ss_dssp ----------SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTST
T ss_pred ----------ceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCC
Confidence 2355677899999999999 778999999999999999987754322 22667787776 33 3
Q ss_pred CEEE--Eec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEc--CCCcEEEEEcccCccccccceeeecc
Q 009373 303 TTVA--STS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGG--EDGAIHMYEIINDCTEANVLLVATWI 377 (536)
Q Consensus 303 ~~l~--~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~--~dg~i~iwd~~~~~~~~~~~~~~~~~ 377 (536)
..+. +++ ++.|++||........... +...+..+.|+|++..+++++ .||.|++||++++ .++.++.
T Consensus 210 ~~~~~~~~~~~~~i~lwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~------~~~~~l~ 281 (318)
T 4ggc_A 210 NVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM------AKVAELK 281 (318)
T ss_dssp TEEEEEECTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC------CEEEEEC
T ss_pred cEEEEEecCCCCEEEEEeccccccccccc--ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC------cEEEEEc
Confidence 4443 344 6899999999998877763 778899999999999887654 7999999999988 6788999
Q ss_pred CCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcc
Q 009373 378 PHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 378 ~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~ 410 (536)
+|.+.|++++|+| .+|++|+.||+|+|||+.+.
T Consensus 282 gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 282 GHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9999999999986 69999999999999999763
No 85
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.4e-31 Score=266.43 Aligned_cols=247 Identities=14% Similarity=0.180 Sum_probs=191.7
Q ss_pred CccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCc-----------eeeeeCCCC------------ceEEE--EecCC
Q 009373 156 GHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGF-----------SIASSKPLG------------CTIRA--VAADK 210 (536)
Q Consensus 156 ~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~-----------~~~~~~~~~------------~~v~~--~~~~~ 210 (536)
.|.+.|++++|+|++++||+|+.||.|+|||+.+++ ....+.+|. ..|.+ ++|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 478999999999999999999999999999999877 477788887 55654 45777
Q ss_pred --CEEEEEeCCCcEEEEEcccCcccee--cccCcc------------------------cccceEE-eeCCccCEEEEEE
Q 009373 211 --KLLVAGGTDGFIHCWRAVEVLPHLF--DISGSE------------------------KQNTQFR-LWEHEGPITSLAL 261 (536)
Q Consensus 211 --~~l~sg~~dg~i~vwd~~~~~~~~~--~~~~~~------------------------~~~~~~~-~~~h~~~v~~l~~ 261 (536)
..|++++.||+|++||+.++..... ...... ....... ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 7999999999999999976432100 000000 0001112 3579999999999
Q ss_pred --eCCEEEEEecCCeEEEEeCC-CceEeEee--------eccccEEEEe--ecC-CEEEEec-CCcEEEEeCCCCcE---
Q 009373 262 --DLTRIYSGSWDMTVRVWDRA-LLKCLKVL--------RHSDWVYGLA--PHD-TTVASTS-GSDVYIWDTNSGCL--- 323 (536)
Q Consensus 262 --~~~~l~s~s~dg~i~iwd~~-~~~~~~~~--------~~~~~v~~~~--~~~-~~l~~~~-d~~i~i~d~~~~~~--- 323 (536)
++++|++| .|+.|++||+. .++....+ .|...|.+++ |++ .++++++ |+.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 67889998 79999999998 44455432 3788899888 777 8888888 89999999999886
Q ss_pred -EEEEcccccc------------ceEEEEEeCCCCEEEEEcCCCcEEEEEccc-CccccccceeeeccCCCCC-------
Q 009373 324 -LTVVNGAHVG------------NTKSLARSHTGDFLFTGGEDGAIHMYEIIN-DCTEANVLLVATWIPHTGP------- 382 (536)
Q Consensus 324 -~~~~~~~~~~------------~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~-~~~~~~~~~~~~~~~h~~~------- 382 (536)
+..+. +|.. .|.+++|+|++++|++++. |.|++||++. + .++..+.+|...
T Consensus 265 ~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~------~~~~~~~~~~~~~~~l~~~ 336 (447)
T 3dw8_B 265 HSKLFE-EPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMEN------RPVETYQVHEYLRSKLCSL 336 (447)
T ss_dssp TCEEEC-CC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCS------SCSCCEESCGGGTTTHHHH
T ss_pred eeeEec-cCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCc------cccceeecccccccccccc
Confidence 66664 4654 8999999999999999999 9999999987 5 456667777542
Q ss_pred --------eEEEEEcC--CeEEEEeCCCcEEEEECCccc
Q 009373 383 --------VNSLAFEF--PWLVSAAGDGKLSLIDVRKLL 411 (536)
Q Consensus 383 --------v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~ 411 (536)
+..++|+| .+|++|+.||.|++||+.+..
T Consensus 337 ~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 337 YENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp HHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred ccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence 33489986 699999999999999998754
No 86
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.5e-32 Score=256.91 Aligned_cols=243 Identities=18% Similarity=0.186 Sum_probs=189.6
Q ss_pred eCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEe----CCEEEEE
Q 009373 196 SKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD----LTRIYSG 269 (536)
Q Consensus 196 ~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~~l~s~ 269 (536)
+.+|...|.++. +++++|++|+.|++|++||+.++. ......+.+|.+.|.+++|. +++|++|
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~-----------~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~ 77 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG-----------QILIADLRGHEGPVWQVAWAHPMYGNILASC 77 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE-----------EEEEEEEECCSSCEEEEEECCGGGSSCEEEE
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC-----------cEEEEEEcCCCccEEEEEeCCCCCCCEEEEE
Confidence 457888887665 889999999999999999987642 12456788999999999992 6899999
Q ss_pred ecCCeEEEEeCCCce--EeEeee-ccccEEEEe--ec--CCEEEEec-CCcEEEEeCCCCcEE--EEEccccccceEEEE
Q 009373 270 SWDMTVRVWDRALLK--CLKVLR-HSDWVYGLA--PH--DTTVASTS-GSDVYIWDTNSGCLL--TVVNGAHVGNTKSLA 339 (536)
Q Consensus 270 s~dg~i~iwd~~~~~--~~~~~~-~~~~v~~~~--~~--~~~l~~~~-d~~i~i~d~~~~~~~--~~~~~~~~~~i~~l~ 339 (536)
+.|++|++||+++++ ....+. |...|.+++ |+ +.+|++++ |+.|++||++.+... .....+|...+.+++
T Consensus 78 s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (316)
T 3bg1_A 78 SYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVS 157 (316)
T ss_dssp ETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCE
T ss_pred ECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEE
Confidence 999999999998874 444454 888999887 55 67888888 999999999876432 223347899999999
Q ss_pred EeCC-----------------CCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC------CeEEEE
Q 009373 340 RSHT-----------------GDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF------PWLVSA 396 (536)
Q Consensus 340 ~~~~-----------------~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~------~~l~s~ 396 (536)
|+|+ +.+|++|+.|+.|++||++... ...++..+.+|...|++++|+| .+|+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~---~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~ 234 (316)
T 3bg1_A 158 WAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG---QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASC 234 (316)
T ss_dssp ECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTS---CEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEE
T ss_pred EccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCC---ccceeeecccCCCceEEEEecCCCCCCCceEEEE
Confidence 9997 4689999999999999996541 1235677889999999999987 479999
Q ss_pred eCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecC--CEEEEecCCCeEEEEeCC
Q 009373 397 AGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGA--DRIVCGGEEGIVRIWNFS 467 (536)
Q Consensus 397 s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~sg~~Dg~i~vW~~~ 467 (536)
+.||+|++||+.+.... ......+.+|...|.++++++ .+|++|+.||+|++|+..
T Consensus 235 s~D~~v~iw~~~~~~~~---------------~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 235 SQDGRVFIWTCDDASSN---------------TWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp ETTCEEEEEECSSTTCC---------------CCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cCCCeEEEEEccCcccc---------------chhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 99999999998763110 001123455677788887765 499999999999999976
No 87
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-32 Score=269.76 Aligned_cols=288 Identities=14% Similarity=0.214 Sum_probs=213.9
Q ss_pred EecCCCEEEEEeCCCcEEEEECCCCceeeee-CCCCceEEEEe--c-CCCEEEEEeCCCcEEEEEcccCccceecccCcc
Q 009373 166 VLASAKLLFTSGYDSIVRMWHLEDGFSIASS-KPLGCTIRAVA--A-DKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSE 241 (536)
Q Consensus 166 ~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~-~~~~~~v~~~~--~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 241 (536)
|+|++..+++++ .|+ .+++.+..+ .+|...|.++. | ++.+|++|+.||+|++||+.+... ..
T Consensus 35 f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~-------~~ 100 (437)
T 3gre_A 35 FGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIV-------GE 100 (437)
T ss_dssp GCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHT-------TC
T ss_pred cCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECccccc-------Cc
Confidence 677887777665 388 557888888 88888887765 7 889999999999999999876210 00
Q ss_pred cccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCC---CceEeEeee-------------ccccEEEEe----
Q 009373 242 KQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRA---LLKCLKVLR-------------HSDWVYGLA---- 299 (536)
Q Consensus 242 ~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~---~~~~~~~~~-------------~~~~v~~~~---- 299 (536)
.......+ +|.+.|.+++| +++.|++|+.||+|++||+. +++...... +...+.++.
T Consensus 101 ~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 179 (437)
T 3gre_A 101 VYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVN 179 (437)
T ss_dssp CCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEEC
T ss_pred ccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEc
Confidence 01122223 59999999999 67899999999999999995 444443332 234455554
Q ss_pred ecCCEEEEec-CCcEEEEeCCCCcEEEEEccc-cccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeecc
Q 009373 300 PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGA-HVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWI 377 (536)
Q Consensus 300 ~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~ 377 (536)
+++.++++++ |+.|++||+++++.+..+... |.+.|++++|+|++.+|++|+.||.|++||++++ .++..+.
T Consensus 180 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~------~~~~~~~ 253 (437)
T 3gre_A 180 EEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN------VLIRSWS 253 (437)
T ss_dssp SSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT------EEEEEEB
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc------cEEEEEe
Confidence 5688888888 899999999999999988643 8899999999999999999999999999999987 5666665
Q ss_pred -CCCCCeEEEEEcC------CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCC-----eeeecc--ccccEE
Q 009373 378 -PHTGPVNSLAFEF------PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPP-----QRMLHG--FECNLL 443 (536)
Q Consensus 378 -~h~~~v~~l~~~~------~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~v~ 443 (536)
+|..+|++++|+| .+|++|+.||.|++||++++.................+.+. ...+.+ |...|.
T Consensus 254 ~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~ 333 (437)
T 3gre_A 254 FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALS 333 (437)
T ss_dssp CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGC
T ss_pred cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceE
Confidence 7888999998865 38999999999999999876433222111100000000000 001233 677777
Q ss_pred EEEecCC-EEEEecCCCeEEEEeCCchhhHHH
Q 009373 444 SVDIGAD-RIVCGGEEGIVRIWNFSQAFEIER 474 (536)
Q Consensus 444 ~~~~~~~-~l~sg~~Dg~i~vW~~~~~~~~~~ 474 (536)
++.+++. +|++|+.||.|++||+.+++....
T Consensus 334 ~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~ 365 (437)
T 3gre_A 334 TISVSNDKILLTDEATSSIVMFSLNELSSSKA 365 (437)
T ss_dssp CEEEETTEEEEEEGGGTEEEEEETTCGGGCEE
T ss_pred EEEECCceEEEecCCCCeEEEEECCCcccceE
Confidence 7777654 899999999999999999876543
No 88
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=9.2e-32 Score=261.78 Aligned_cols=236 Identities=16% Similarity=0.164 Sum_probs=201.8
Q ss_pred ccccEEEEEEecC----CCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--c-CCCEEEEEeCCCcEEEEEccc
Q 009373 157 HTEAVLTVFVLAS----AKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--A-DKKLLVAGGTDGFIHCWRAVE 229 (536)
Q Consensus 157 h~~~V~~v~~~~~----~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~-~~~~l~sg~~dg~i~vwd~~~ 229 (536)
|...|++++|+|+ +.+|++|+.||.|++||+.+++.+..+.+|...|.++. | ++.+|++|+.||.|++||+.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 6688999999999 67999999999999999999999999999998888776 6 789999999999999999976
Q ss_pred CccceecccCcccccceEEe---eCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee--------------
Q 009373 230 VLPHLFDISGSEKQNTQFRL---WEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-------------- 290 (536)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------------- 290 (536)
+. ....+ .+|...|.+++| ++++|++++.||.|++||+++++....+.
T Consensus 148 ~~-------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (366)
T 3k26_A 148 DT-------------LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPF 214 (366)
T ss_dssp TE-------------EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCC
T ss_pred Ce-------------EEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccc
Confidence 53 33444 689999999999 67899999999999999999876543332
Q ss_pred ---------------ccccEEEEeecCCEEEEec-CCcEEEEeCCCCcE--------------EEEEccccccceEEEEE
Q 009373 291 ---------------HSDWVYGLAPHDTTVASTS-GSDVYIWDTNSGCL--------------LTVVNGAHVGNTKSLAR 340 (536)
Q Consensus 291 ---------------~~~~v~~~~~~~~~l~~~~-d~~i~i~d~~~~~~--------------~~~~~~~~~~~i~~l~~ 340 (536)
|...|.++..+++++++++ |+.|++||+.++.. +..+. +|...|++++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 293 (366)
T 3k26_A 215 ISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD-YSQCDIWYMRF 293 (366)
T ss_dssp CCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE-CSSCCSSCCCC
T ss_pred cceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheecccc-ccCCcEEEEEE
Confidence 7788999997799999988 89999999988744 55554 68889999999
Q ss_pred eCC--CCEEEEEcCCCcEEEEEcccCccccccceeeeccCC--CCCeEEEEEcC--CeEEEEeCCCcEEEEECC
Q 009373 341 SHT--GDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPH--TGPVNSLAFEF--PWLVSAAGDGKLSLIDVR 408 (536)
Q Consensus 341 ~~~--~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h--~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~ 408 (536)
+|+ +.+|++|+.||.|++||+.++.... .....+.+| ...|++++|+| .+|++++.||.|++||+.
T Consensus 294 s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 294 SMDFWQKMLALGNQVGKLYVWDLEVEDPHK--AKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EECTTSSEEEEECTTSCEEEEECCSSSGGG--CEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cCCCCCcEEEEEecCCcEEEEECCCCCCcc--ccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 999 9999999999999999998874221 234466677 79999999986 799999999999999985
No 89
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=270.98 Aligned_cols=245 Identities=11% Similarity=0.063 Sum_probs=194.3
Q ss_pred eeeeCccccEEEEEEecC------CCEEEEEeCCCcEEEEECCCCce-----------eeeeCCCCceEEEEec-CCCEE
Q 009373 152 DVLYGHTEAVLTVFVLAS------AKLLFTSGYDSIVRMWHLEDGFS-----------IASSKPLGCTIRAVAA-DKKLL 213 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~------~~~l~sgs~dg~v~iwd~~~~~~-----------~~~~~~~~~~v~~~~~-~~~~l 213 (536)
.++.+|.+.|.+++|+|+ +.+||+|+.||+|++||+.++.. ...+.+|...|.++.. .+..|
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~l 280 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTV 280 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEE
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeE
Confidence 457789999999999996 57999999999999999987642 2366788888888873 34689
Q ss_pred EEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEE--EE--eC-CEEEEEecCCeEEEEeCCCceEeEe
Q 009373 214 VAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSL--AL--DL-TRIYSGSWDMTVRVWDRALLKCLKV 288 (536)
Q Consensus 214 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l--~~--~~-~~l~s~s~dg~i~iwd~~~~~~~~~ 288 (536)
++|+.||+|++||+.++. .+...+.+|.+.|.++ .| ++ .+|+||+.|++|++||++++++...
T Consensus 281 asgs~DgtV~lWD~~~~~------------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~ 348 (524)
T 2j04_B 281 VCGFKNGFVAEFDLTDPE------------VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKT 348 (524)
T ss_dssp EEEETTSEEEEEETTBCS------------SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCE
T ss_pred EEEeCCCEEEEEECCCCC------------CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccc
Confidence 999999999999997642 2345578999999999 45 44 6899999999999999998887666
Q ss_pred ee-cc--ccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcc
Q 009373 289 LR-HS--DWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEII 362 (536)
Q Consensus 289 ~~-~~--~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~ 362 (536)
+. |. ..|.+++ |++..+++++ |++|++||++++..+..+. +|.+.|++++|+|+|++|++|+.||+|++||+.
T Consensus 349 ~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~-gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 349 TVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV-SRETTITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp EEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE-ECSSCEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred cccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeee-cCCCceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 54 43 2455554 8888888887 8899999999998877775 699999999999999999999999999999863
Q ss_pred cCcccc--------------------------------------ccceeeeccCCCCCeEEEEEcCC-----eEEEEeCC
Q 009373 363 NDCTEA--------------------------------------NVLLVATWIPHTGPVNSLAFEFP-----WLVSAAGD 399 (536)
Q Consensus 363 ~~~~~~--------------------------------------~~~~~~~~~~h~~~v~~l~~~~~-----~l~s~s~d 399 (536)
...... ....+..+.+|...|++++|+|+ .+++|+.|
T Consensus 428 ~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~ 507 (524)
T 2j04_B 428 RRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSA 507 (524)
T ss_dssp SSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTT
T ss_pred HhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccC
Confidence 321000 01234456789999999999985 89999999
Q ss_pred CcEEEEECCc
Q 009373 400 GKLSLIDVRK 409 (536)
Q Consensus 400 g~i~vwd~~~ 409 (536)
|.|+||++.-
T Consensus 508 g~vrlw~l~~ 517 (524)
T 2j04_B 508 GLLTLEYLSL 517 (524)
T ss_dssp SEEEEEECSC
T ss_pred ceEEEEEccc
Confidence 9999999874
No 90
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.8e-31 Score=254.76 Aligned_cols=247 Identities=17% Similarity=0.193 Sum_probs=206.8
Q ss_pred eeeeCccccEEEEEEecC---CCEEEEEeCCCcEEEEECCCCc-eeeeeCCCCceEEEE--------ecCCCEEEEEeCC
Q 009373 152 DVLYGHTEAVLTVFVLAS---AKLLFTSGYDSIVRMWHLEDGF-SIASSKPLGCTIRAV--------AADKKLLVAGGTD 219 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~---~~~l~sgs~dg~v~iwd~~~~~-~~~~~~~~~~~v~~~--------~~~~~~l~sg~~d 219 (536)
....+|...|.+++|+|+ +.+|++|+.||.|++||+.+++ .+..+.+|...+.++ +++++.|++|+.|
T Consensus 59 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d 138 (357)
T 3i2n_A 59 LREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD 138 (357)
T ss_dssp EEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETT
T ss_pred eeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCC
Confidence 334589999999999998 6999999999999999999988 888899999999877 4788999999999
Q ss_pred CcEEEEEcccCccceecccCcccccceEEeeCCcc----CEEEEE----E--eCCEEEEEecCCeEEEEeCCCceEeEee
Q 009373 220 GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEG----PITSLA----L--DLTRIYSGSWDMTVRVWDRALLKCLKVL 289 (536)
Q Consensus 220 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~----~v~~l~----~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 289 (536)
|.|++||+.++. .....+..|.+ .|.+++ | ++..+++++.||.|++||+++++.....
T Consensus 139 ~~i~vwd~~~~~------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 206 (357)
T 3i2n_A 139 GTVKVWDPRQKD------------DPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET 206 (357)
T ss_dssp SCEEEECTTSCS------------SCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CeEEEEeCCCCC------------CcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec
Confidence 999999997753 13334444443 889988 3 7789999999999999999999987777
Q ss_pred eccccEEEEe--e---cCCEEEEec-CCcEEEEeCCCCcEEEEEc----cccccceEEEEEeCCCC-EEEEEcCCCcEEE
Q 009373 290 RHSDWVYGLA--P---HDTTVASTS-GSDVYIWDTNSGCLLTVVN----GAHVGNTKSLARSHTGD-FLFTGGEDGAIHM 358 (536)
Q Consensus 290 ~~~~~v~~~~--~---~~~~l~~~~-d~~i~i~d~~~~~~~~~~~----~~~~~~i~~l~~~~~~~-~l~tg~~dg~i~i 358 (536)
.+...|.++. | ++.++++++ ++.|++||+++++....+. .+|...|++++|+|++. +|++|+.||.|++
T Consensus 207 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 286 (357)
T 3i2n_A 207 NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHL 286 (357)
T ss_dssp ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEE
Confidence 7899999988 5 788888888 8999999998876544332 26999999999999998 8999999999999
Q ss_pred EEcccCcccc-------------ccceeeeccCCCCCeEEEEEcC--CeEE-EEeCCCcEEEEECCcc
Q 009373 359 YEIINDCTEA-------------NVLLVATWIPHTGPVNSLAFEF--PWLV-SAAGDGKLSLIDVRKL 410 (536)
Q Consensus 359 wd~~~~~~~~-------------~~~~~~~~~~h~~~v~~l~~~~--~~l~-s~s~dg~i~vwd~~~~ 410 (536)
||++.+.... ....+..+.+|..+|++++|+| .+|+ +++.||.|++||+.+.
T Consensus 287 wd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 287 WKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred eecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 9998754221 1246777889999999999987 5676 8999999999999864
No 91
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-30 Score=244.24 Aligned_cols=246 Identities=16% Similarity=0.188 Sum_probs=210.7
Q ss_pred hccccCCccceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCC---ceeeeeCCCCceEEEEecCCCEEEEEe
Q 009373 141 RSKTFLGRYSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDG---FSIASSKPLGCTIRAVAADKKLLVAGG 217 (536)
Q Consensus 141 ~~~~~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~l~sg~ 217 (536)
+.+...+......+.+|...|.+++|+|++++|++|+.||.|++|++.+. +.+..+.+|...+.++.++++.+++|+
T Consensus 42 ~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~ 121 (313)
T 3odt_A 42 RLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGS 121 (313)
T ss_dssp EEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEE
T ss_pred EEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEe
Confidence 33344445567888999999999999999999999999999999998754 567788899999999999999999999
Q ss_pred CCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE---eCCEEEEEecCCeEEEEeCCCceEeEeee--cc
Q 009373 218 TDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL---DLTRIYSGSWDMTVRVWDRALLKCLKVLR--HS 292 (536)
Q Consensus 218 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~---~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~ 292 (536)
.||.|++||. ......+..|...|.++.+ +++.+++++.||.|++||. .+....+. +.
T Consensus 122 ~d~~i~~~d~---------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~ 184 (313)
T 3odt_A 122 WDKTAKVWKE---------------GSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHN 184 (313)
T ss_dssp TTSEEEEEET---------------TEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCS
T ss_pred CCCCEEEEcC---------------CcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCc
Confidence 9999999992 2356677889999999998 6789999999999999994 44555554 78
Q ss_pred ccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccc
Q 009373 293 DWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEAN 369 (536)
Q Consensus 293 ~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~ 369 (536)
..+.++. +++. +++++ ++.|++||+++++.+..+. +|...|++++|+|++ .|++++.||.|++||+.++
T Consensus 185 ~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~----- 256 (313)
T 3odt_A 185 DVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE-GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENG----- 256 (313)
T ss_dssp SCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTC-----
T ss_pred ccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh-cCCceEEEEEEecCC-CEEEEecCCEEEEEECCCC-----
Confidence 8888887 6777 55555 9999999999999999886 699999999999999 5899999999999999988
Q ss_pred cceeeeccCCCCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccc
Q 009373 370 VLLVATWIPHTGPVNSLAFEF-PWLVSAAGDGKLSLIDVRKLLR 412 (536)
Q Consensus 370 ~~~~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~ 412 (536)
..+..+..|...|.+++|+| ..+++++.||.|++||+++...
T Consensus 257 -~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 257 -SLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp -CEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGGC
T ss_pred -ceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCce
Confidence 67788889999999999987 3588899999999999987543
No 92
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.1e-30 Score=257.46 Aligned_cols=245 Identities=17% Similarity=0.151 Sum_probs=207.5
Q ss_pred ceeeeeCccccEEEEEEecC----C---CEEEEEeCCCcEEEEECCCCce-----eeeeCCC-----CceEE--EEe---
Q 009373 150 SIDVLYGHTEAVLTVFVLAS----A---KLLFTSGYDSIVRMWHLEDGFS-----IASSKPL-----GCTIR--AVA--- 207 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~----~---~~l~sgs~dg~v~iwd~~~~~~-----~~~~~~~-----~~~v~--~~~--- 207 (536)
.+..+.+|...|++++|+|+ + ++|++|+.||.|++||+.+++. +..+..| ...+. +++
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 57788899999999999999 9 9999999999999999998887 7888777 46665 456
Q ss_pred -cCCCE-EEEEeCCCcEEEEEccc------CccceecccCcccccceEEe-------eCCccCEEEEEE--eCCEEEEEe
Q 009373 208 -ADKKL-LVAGGTDGFIHCWRAVE------VLPHLFDISGSEKQNTQFRL-------WEHEGPITSLAL--DLTRIYSGS 270 (536)
Q Consensus 208 -~~~~~-l~sg~~dg~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~-------~~h~~~v~~l~~--~~~~l~s~s 270 (536)
+++.. |++|+.||.|++||+.+ +.... ......+ ..|...|.+++| ++ .+++++
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~ 204 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN--------WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF 204 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC--------CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceee--------ccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe
Confidence 67899 99999999999999977 32111 1111134 458899999999 56 999999
Q ss_pred cCCeEEEEeCCCceEeEeee----c---cccEEEEe--ecCCEEEEec-C---CcEEEEeCCCCcEEEEEccc-------
Q 009373 271 WDMTVRVWDRALLKCLKVLR----H---SDWVYGLA--PHDTTVASTS-G---SDVYIWDTNSGCLLTVVNGA------- 330 (536)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~----~---~~~v~~~~--~~~~~l~~~~-d---~~i~i~d~~~~~~~~~~~~~------- 330 (536)
.||.|++||+++++.+..+. | ...|.++. +++.+|++++ | +.|++||+++++.+..+. +
T Consensus 205 ~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~-~~~~~~~~ 283 (397)
T 1sq9_A 205 NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS-VPTHSSQA 283 (397)
T ss_dssp TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC-BC------
T ss_pred CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceec-cCcccccc
Confidence 99999999999999888877 4 88899887 7899999888 7 899999999999998885 5
Q ss_pred ------cccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeecc------CC---------------CCCe
Q 009373 331 ------HVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWI------PH---------------TGPV 383 (536)
Q Consensus 331 ------~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~------~h---------------~~~v 383 (536)
|...|.+++|+|++++|++|+.||.|++||++++ ..+..+. +| ...|
T Consensus 284 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v 357 (397)
T 1sq9_A 284 SLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK------ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGV 357 (397)
T ss_dssp --CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT------EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCE
T ss_pred cccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC------ceeEEEecccCcccchhhhhccccccccccCCce
Confidence 8999999999999999999999999999999988 5666666 77 9999
Q ss_pred EEEEEcCC------------eEEEEeCCCcEEEEECCcc
Q 009373 384 NSLAFEFP------------WLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 384 ~~l~~~~~------------~l~s~s~dg~i~vwd~~~~ 410 (536)
++++|+|+ +|++++.||.|++||++++
T Consensus 358 ~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 358 FDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp EEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred eEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 99999864 8999999999999999763
No 93
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.3e-30 Score=275.77 Aligned_cols=241 Identities=22% Similarity=0.318 Sum_probs=200.8
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEc
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~ 227 (536)
..+.+.+|...|.+++|+|++++|+||+.||+|+|||+.++..+..+.+|...|.++. ++++.|++|+.|++|++||.
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 3568899999999999999999999999999999999999999999999999887765 89999999999999999997
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEEeC----CEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--e
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDL----TRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--P 300 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~----~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~ 300 (536)
..... ........+|...|.+++|.+ ..+++|+.|++|++||+++++....+. |...|.+++ |
T Consensus 502 ~~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp 571 (694)
T 3dm0_A 502 LGECK----------YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP 571 (694)
T ss_dssp TSCEE----------EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred CCCcc----------eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC
Confidence 54311 001111246899999999933 479999999999999999999888887 899999887 8
Q ss_pred cCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccC-
Q 009373 301 HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIP- 378 (536)
Q Consensus 301 ~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~- 378 (536)
+++++++++ |+.|++||+++++.+..+. +...|.+++|+|++.++++++ |+.|++||++++. .+..+..
T Consensus 572 dg~~l~sg~~Dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~------~~~~~~~~ 642 (694)
T 3dm0_A 572 DGSLCASGGKDGVVLLWDLAEGKKLYSLE--ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKS------IVEDLKVD 642 (694)
T ss_dssp TSSEEEEEETTSBCEEEETTTTEEEECCB--CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTE------EEEEECCC
T ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEec--CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCC------Chhhhccc
Confidence 899999988 8999999999999887774 567899999999998887765 5569999998873 3322221
Q ss_pred ------------------CCCCeEEEEEcC--CeEEEEeCCCcEEEEECCc
Q 009373 379 ------------------HTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 379 ------------------h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~ 409 (536)
+...+++++|+| .+|++|+.||.|++||+..
T Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 643 LKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp CC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred cccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 222478999986 7999999999999999853
No 94
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.6e-31 Score=281.64 Aligned_cols=247 Identities=16% Similarity=0.139 Sum_probs=202.8
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECC--CCceeeeeCCCCceEEEEe--cC--CCEEEEEeCCCcEEE
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLE--DGFSIASSKPLGCTIRAVA--AD--KKLLVAGGTDGFIHC 224 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~--~~--~~~l~sg~~dg~i~v 224 (536)
+.++.||.+.|++++|+|++++|++|+.||+|+|||+. ++..+..+.+|...|.++. ++ +++|++|+.||.|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 45789999999999999999999999999999999998 5577888999999998776 55 899999999999999
Q ss_pred EEcccCccceecccCcccccceEEeeCCccCEEEEEE--e--CCEEEEEecCCeEEEEeCCCceEeE--ee-eccccEEE
Q 009373 225 WRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--D--LTRIYSGSWDMTVRVWDRALLKCLK--VL-RHSDWVYG 297 (536)
Q Consensus 225 wd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~--~~~l~s~s~dg~i~iwd~~~~~~~~--~~-~~~~~v~~ 297 (536)
||+.++. ......+.+|...|.+++| + ++.+++|+.||.|++||+.++.... .+ .|...|.+
T Consensus 82 wd~~~~~-----------~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~ 150 (753)
T 3jro_A 82 WKEENGR-----------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNS 150 (753)
T ss_dssp EEEETTE-----------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEE
T ss_pred EECCCCc-----------ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEE
Confidence 9997652 2355667789999999999 4 7899999999999999998874332 22 38888998
Q ss_pred Ee--e-------------cCCEEEEec-CCcEEEEeCCCC----cEEEEEccccccceEEEEEeCC---CCEEEEEcCCC
Q 009373 298 LA--P-------------HDTTVASTS-GSDVYIWDTNSG----CLLTVVNGAHVGNTKSLARSHT---GDFLFTGGEDG 354 (536)
Q Consensus 298 ~~--~-------------~~~~l~~~~-d~~i~i~d~~~~----~~~~~~~~~~~~~i~~l~~~~~---~~~l~tg~~dg 354 (536)
+. | ++..+++++ ||.|++||++++ .....+. +|...|++++|+|+ +.+|++|+.||
T Consensus 151 l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~-~h~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp EEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred EEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec-CCCCcEEEEEeccCCCCCCEEEEEecCC
Confidence 87 4 467788877 899999999887 3444553 69999999999999 89999999999
Q ss_pred cEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcc
Q 009373 355 AIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 355 ~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~ 410 (536)
.|++||++++.... .........|...|++++|+| .+|++|+.||.|++||+.+.
T Consensus 230 ~I~iwd~~~~~~~~-~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 230 TCIIWTQDNEQGPW-KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CEEEEEESSSSSCC-BCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred EEEEecCCCCCCcc-eeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 99999998863211 123444567899999999986 69999999999999999864
No 95
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.98 E-value=2.3e-30 Score=252.57 Aligned_cols=253 Identities=16% Similarity=0.161 Sum_probs=206.1
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeee--eCCCCceEEEEe--cCCCEEEEEeCCCcEEEE
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIAS--SKPLGCTIRAVA--ADKKLLVAGGTDGFIHCW 225 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~--~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vw 225 (536)
.+..+.+|...|.+++|+|++++|++|+.||.|++||+.+++.... +..|...+.++. +++++|++|+.||.|++|
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~ 123 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISIC 123 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEE
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEE
Confidence 5788899999999999999999999999999999999988875443 366777776655 889999999999999999
Q ss_pred EcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeC------------------CCceE
Q 009373 226 RAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDR------------------ALLKC 285 (536)
Q Consensus 226 d~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~------------------~~~~~ 285 (536)
|+..+... ........+|...|.+++| ++++|++++.||.|++||+ .+++.
T Consensus 124 d~~~~~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (372)
T 1k8k_C 124 YFEQENDW---------WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL 194 (372)
T ss_dssp EEETTTTE---------EEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCE
T ss_pred EecCCCcc---------eeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhh
Confidence 99765310 0112233578999999999 6789999999999999995 46677
Q ss_pred eEeee-ccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEc
Q 009373 286 LKVLR-HSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEI 361 (536)
Q Consensus 286 ~~~~~-~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~ 361 (536)
+..+. |...|.++. +++.++++++ |+.|++||+++++.+..+. .|...|.+++|+|++.++++| .||.|++|++
T Consensus 195 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~ 272 (372)
T 1k8k_C 195 MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA-SETLPLLAVTFITESSLVAAG-HDCFPVLFTY 272 (372)
T ss_dssp EEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE-CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEE
T ss_pred eEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc-cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEc
Confidence 77775 888899887 7888999888 8999999999999998886 688899999999999988888 8999999999
Q ss_pred cc--Ccc--------------------------cccccee------eec-cCCCCCeEEEEEc-C-----CeEEEEeCCC
Q 009373 362 IN--DCT--------------------------EANVLLV------ATW-IPHTGPVNSLAFE-F-----PWLVSAAGDG 400 (536)
Q Consensus 362 ~~--~~~--------------------------~~~~~~~------~~~-~~h~~~v~~l~~~-~-----~~l~s~s~dg 400 (536)
.+ +.- ....... ..+ .+|..+|++++|. + .+|++|+.||
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg 352 (372)
T 1k8k_C 273 DSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDG 352 (372)
T ss_dssp ETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTS
T ss_pred cCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCC
Confidence 88 310 0000010 223 4899999999974 3 6999999999
Q ss_pred cEEEEECCccccc
Q 009373 401 KLSLIDVRKLLRS 413 (536)
Q Consensus 401 ~i~vwd~~~~~~~ 413 (536)
.|++||++++...
T Consensus 353 ~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 353 GMSIWDVRSLESA 365 (372)
T ss_dssp EEEEEEHHHHHHH
T ss_pred ceEEEEecChhHh
Confidence 9999999876433
No 96
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.6e-29 Score=246.11 Aligned_cols=256 Identities=18% Similarity=0.229 Sum_probs=217.5
Q ss_pred cCCccceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEE--ecCCCEEEEEeCC---
Q 009373 145 FLGRYSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAV--AADKKLLVAGGTD--- 219 (536)
Q Consensus 145 ~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~--~~~~~~l~sg~~d--- 219 (536)
......+..+.+|.+.|.+++|+|++++|++++.||.|++||+.+++.+..+. +...+.++ ++++..+++++.+
T Consensus 61 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~ 139 (369)
T 3zwl_B 61 SLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMK 139 (369)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTT
T ss_pred CCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccC
Confidence 33445678899999999999999999999999999999999999999888876 55555554 5899999999999
Q ss_pred --CcEEEEEcccCccceecccCcccccceEEeeCCcc--CEEEEEE--eCCEEEEEecCCeEEEEeCCC-ceEeEeee-c
Q 009373 220 --GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEG--PITSLAL--DLTRIYSGSWDMTVRVWDRAL-LKCLKVLR-H 291 (536)
Q Consensus 220 --g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~l~~--~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~-~ 291 (536)
|.|.+||+........-.. ........+..|.+ .+.+++| +++.|++++.||.|++||+.+ .+....+. |
T Consensus 140 ~~g~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 217 (369)
T 3zwl_B 140 NPGSINIYEIERDSATHELTK--VSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLH 217 (369)
T ss_dssp BCCEEEEEEEEECTTTCCEEE--ECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECC
T ss_pred CCCEEEEEEecCCccceeecc--cccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecC
Confidence 9999999977642111000 11123445566776 9999999 778999999999999999998 77777777 8
Q ss_pred cccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCC--------------
Q 009373 292 SDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDG-------------- 354 (536)
Q Consensus 292 ~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg-------------- 354 (536)
...|.++. +++.+|++++ |+.|++||+++++.+..+. +...+.+++|+|++.++++++.++
T Consensus 218 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 295 (369)
T 3zwl_B 218 EKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKF 295 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECCC-------------C
T ss_pred CCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcc
Confidence 88999887 7899998888 8999999999999998885 788999999999999999999988
Q ss_pred cEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCccc
Q 009373 355 AIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLL 411 (536)
Q Consensus 355 ~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~ 411 (536)
.+++||+.++ ..+..+.+|...|++++|+| .+|++++.||.|++|++++..
T Consensus 296 ~i~~~d~~~~------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 296 EARFYHKIFE------EEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp EEEEEETTTC------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred eeEEEecCCC------cchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcccc
Confidence 8999999888 67788899999999999986 699999999999999998753
No 97
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.1e-31 Score=262.13 Aligned_cols=301 Identities=7% Similarity=-0.031 Sum_probs=218.7
Q ss_pred ccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEcccCccce
Q 009373 157 HTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRAVEVLPHL 234 (536)
Q Consensus 157 h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~~~~~~~~ 234 (536)
-...|.+++|+|||+++||++.|++|+ |...++.+ .+|...+.++. |+| .++.+.+|+.+..
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~---- 77 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NCNSKNLFHVKEFPLE-------FENKLDFELAQQN---- 77 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SSBGGGTEEEEEECCC-------CCCTTTTSCCCSS----
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--ccccccee---cCCCccEEEEEECCCC-------CcceEEEEeCCCc----
Confidence 357899999999999999999999999 75555444 67887776654 777 4555555553221
Q ss_pred ecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeeeccc-----cEEEEe--ecCCEE
Q 009373 235 FDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLRHSD-----WVYGLA--PHDTTV 305 (536)
Q Consensus 235 ~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----~v~~~~--~~~~~l 305 (536)
....+ .|...|.+++| +|..|++++.||+|++||..+ ++..+.|.. .+.+++ |+|++|
T Consensus 78 ----------~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~L 144 (588)
T 2j04_A 78 ----------GLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSI 144 (588)
T ss_dssp ----------CSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCE
T ss_pred ----------eEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEE
Confidence 11112 45789999999 889999999999999999654 555555443 488877 999999
Q ss_pred EEec-CCcEEEEeCCCCcE-------EEEEc---cccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceee
Q 009373 306 ASTS-GSDVYIWDTNSGCL-------LTVVN---GAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVA 374 (536)
Q Consensus 306 ~~~~-d~~i~i~d~~~~~~-------~~~~~---~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~ 374 (536)
++++ ||+|++||+.++.. +.++. .+|...|.+++|+|+| +++++.|++|++||+..+... ....
T Consensus 145 Asgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~---~~~~ 219 (588)
T 2j04_A 145 VVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ---PVSR 219 (588)
T ss_dssp EEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC---CCEE
T ss_pred EEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc---ccee
Confidence 9999 89999999999853 56652 4688999999999999 888899999999999887310 1234
Q ss_pred ec-cCCCCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEe--cCC-
Q 009373 375 TW-IPHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDI--GAD- 450 (536)
Q Consensus 375 ~~-~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~- 450 (536)
++ .+|...|.+++|++..|++++ +++|++||+.+... .....+|...+.++.+ +++
T Consensus 220 tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~-------------------~~~~~gh~~~V~~va~~~s~d~ 279 (588)
T 2j04_A 220 MIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYSI-------------------SSLKTGSLENFHIIPLNHEKES 279 (588)
T ss_dssp EEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTEE-------------------EEEECSCCSCCCEEEETTCSSC
T ss_pred eecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCeE-------------------EEEEcCCCceEEEEEeeeCCCC
Confidence 45 478899999999978888887 69999999986421 1122378888887877 666
Q ss_pred -EEEEecCCCeEEEEeCC-----c-hhhHHHHHHhhhcccchh---------HHHhhhhccccccCCCCcceeEeecccC
Q 009373 451 -RIVCGGEEGIVRIWNFS-----Q-AFEIERRARALRGIRLEN---------RMRRRKLQTEMSSKGGRTDQCSVAAKKN 514 (536)
Q Consensus 451 -~l~sg~~Dg~i~vW~~~-----~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 514 (536)
.++++++||+ ++|.+. . +..+... .+...... .....+.++++||||..+|+++-= ..+
T Consensus 280 ~~La~a~edG~-klw~~d~~~~spd~~l~a~~---d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~i-~~~ 354 (588)
T 2j04_A 280 TILLMSNKTSY-KVLLEDELHVTADNIIAPYL---EKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYDM-ERV 354 (588)
T ss_dssp EEEEECSSCEE-EEEESSSEEEECCCSSHHHH---HHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEEE-ECS
T ss_pred CEEEEEcCCCC-EEEeeccEEECCCceEEEEc---CCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEec-cCc
Confidence 8999999999 999973 2 2222111 11111110 012235679999999999976543 444
Q ss_pred Cc
Q 009373 515 PM 516 (536)
Q Consensus 515 ~~ 516 (536)
.+
T Consensus 355 ~~ 356 (588)
T 2j04_A 355 AF 356 (588)
T ss_dssp SC
T ss_pred ee
Confidence 33
No 98
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.1e-31 Score=260.73 Aligned_cols=247 Identities=14% Similarity=0.061 Sum_probs=190.0
Q ss_pred cceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCc---eeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEE
Q 009373 149 YSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGF---SIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIH 223 (536)
Q Consensus 149 ~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~---~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~ 223 (536)
..+..+.+|.+.|++++|+|++++|++|+.|++|++||+.+++ ....+..|...+.++. |++++|++|+.|+.|+
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 125 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVIS 125 (377)
T ss_dssp EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEE
T ss_pred EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEE
Confidence 3567889999999999999999999999999999999999887 6777788988888776 7899999999999999
Q ss_pred EEEcccCccceecccCcccccceEEeeC-CccCEEEEEE--eCCEEEEEecCCeEEEEeCC------------------C
Q 009373 224 CWRAVEVLPHLFDISGSEKQNTQFRLWE-HEGPITSLAL--DLTRIYSGSWDMTVRVWDRA------------------L 282 (536)
Q Consensus 224 vwd~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~------------------~ 282 (536)
+||+.++.. ......+.+ |...|.+++| ++++|++++.|++|++||+. .
T Consensus 126 iwd~~~~~~----------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 195 (377)
T 3dwl_C 126 VCYFEQEND----------WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPF 195 (377)
T ss_dssp ECCC---------------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCE
T ss_pred EEEECCccc----------ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccch
Confidence 999976521 123455666 9999999999 66899999999999999985 3
Q ss_pred ceEeEeeeccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcE----EEEEccccccceEEEEEeCCCCEEEEEcCCCc
Q 009373 283 LKCLKVLRHSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCL----LTVVNGAHVGNTKSLARSHTGDFLFTGGEDGA 355 (536)
Q Consensus 283 ~~~~~~~~~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~----~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~ 355 (536)
++++..+.|...|.+++ |++++|++++ |+.|++||+.+++. +..+. +|...|.+++|+|++++|++|+.++.
T Consensus 196 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~ 274 (377)
T 3dwl_C 196 NTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVK-LSQLPLRSLLWANESAIVAAGYNYSP 274 (377)
T ss_dssp EEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEE-CSSSCEEEEEEEETTEEEEEESSSSE
T ss_pred hhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeec-CCCCceEEEEEcCCCCEEEEEcCCcE
Confidence 45555567888899887 8899898888 89999999999987 55564 69999999999999999999987765
Q ss_pred EEEEEcccCccc--cc----------------------c----------------------ceeeeccCCCCCeEEEEEc
Q 009373 356 IHMYEIINDCTE--AN----------------------V----------------------LLVATWIPHTGPVNSLAFE 389 (536)
Q Consensus 356 i~iwd~~~~~~~--~~----------------------~----------------------~~~~~~~~h~~~v~~l~~~ 389 (536)
+ +|+....... .. . ........|...|+++++.
T Consensus 275 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~ 353 (377)
T 3dwl_C 275 I-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPY 353 (377)
T ss_dssp E-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEE
T ss_pred E-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEecc
Confidence 5 7766522100 00 0 0001122499999999975
Q ss_pred C---C---eEEEEeCCCcEEEEEC
Q 009373 390 F---P---WLVSAAGDGKLSLIDV 407 (536)
Q Consensus 390 ~---~---~l~s~s~dg~i~vwd~ 407 (536)
+ . .|+||+.||.|++||+
T Consensus 354 ~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 354 AGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EEETTEEEEEEEEETTSEEEEECC
T ss_pred CCCCCceEEEEeecCCCcEEEecC
Confidence 3 2 6999999999999985
No 99
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=2.3e-30 Score=253.91 Aligned_cols=293 Identities=11% Similarity=0.122 Sum_probs=209.4
Q ss_pred CCCCceeeeeCCCCceEEEEe--cCC-CEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEe-
Q 009373 187 LEDGFSIASSKPLGCTIRAVA--ADK-KLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD- 262 (536)
Q Consensus 187 ~~~~~~~~~~~~~~~~v~~~~--~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~- 262 (536)
+.+......+.+|...|.++. +++ ++|++|+.||.|++||+.++. ........+|.+.|.+++|.
T Consensus 60 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~h~~~v~~~~~~~ 128 (383)
T 3ei3_B 60 LKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN-----------KTSFIQGMGPGDAITGMKFNQ 128 (383)
T ss_dssp HTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT-----------CEEEECCCSTTCBEEEEEEET
T ss_pred ccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc-----------cceeeecCCcCCceeEEEeCC
Confidence 344555667788888887765 777 899999999999999997653 12223334799999999994
Q ss_pred --CCEEEEEecCCeEEEEeCCCceEeEeee----ccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEcccccc
Q 009373 263 --LTRIYSGSWDMTVRVWDRALLKCLKVLR----HSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVG 333 (536)
Q Consensus 263 --~~~l~s~s~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~ 333 (536)
++.|++++.|+.|++||+.+. ....+. +...|.+++ +++.++++++ |+.|++||+ +++.+..+. +|..
T Consensus 129 ~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~-~h~~ 205 (383)
T 3ei3_B 129 FNTNQLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEK-LHKA 205 (383)
T ss_dssp TEEEEEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEE-CSSS
T ss_pred CCCCEEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEec-cCCC
Confidence 478999999999999999864 444443 346788877 8899999988 899999999 567777775 6999
Q ss_pred ceEEEEEeCCCC-EEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC---CeEEEEeCCCcEEEEECCc
Q 009373 334 NTKSLARSHTGD-FLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF---PWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 334 ~i~~l~~~~~~~-~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~ 409 (536)
.|.+++|+|+++ +|++|+.||.|++||+++..... ..+..+ +|...|++++|+| .+|++++.|+.|++||+++
T Consensus 206 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~--~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 206 KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN--SYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT--CEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc--ceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence 999999999999 99999999999999999843211 334444 6999999999987 7999999999999999987
Q ss_pred ccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEe--cCCEEEEecCCCeEEEEeCCchhhHHHHHHhhhcccchhH
Q 009373 410 LLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDI--GADRIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLENR 487 (536)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~ 487 (536)
............. .................+..+.+ ++.+ +|+.||.|++||+.+++.+.......
T Consensus 283 ~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~-------- 350 (383)
T 3ei3_B 283 WSKPDQIIIHPHR--QFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPN-------- 350 (383)
T ss_dssp TTSCSEEEECCBC--CCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTT--------
T ss_pred Ccccccccccccc--ccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCC--------
Confidence 6443221100000 00000000000011123333443 4445 89999999999999887654322110
Q ss_pred HHhhhhccccccCCCCcceeE
Q 009373 488 MRRRKLQTEMSSKGGRTDQCS 508 (536)
Q Consensus 488 ~~~~~~~~~~~~~g~~~~~~~ 508 (536)
.......++|+|+|..+++++
T Consensus 351 ~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 351 AAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp BCSCCCEEEECTTSSEEEEEE
T ss_pred CCceEEEEEEecCccEEEEec
Confidence 112234569999999999884
No 100
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=4.9e-30 Score=253.26 Aligned_cols=282 Identities=13% Similarity=0.143 Sum_probs=217.1
Q ss_pred EEEEEEecCCC-EEEEEeCCCcEEEEECCCC----ceeeeeCCCCceEEEEe--c-CCCEEEEEeCCCcEEEEEcccCcc
Q 009373 161 VLTVFVLASAK-LLFTSGYDSIVRMWHLEDG----FSIASSKPLGCTIRAVA--A-DKKLLVAGGTDGFIHCWRAVEVLP 232 (536)
Q Consensus 161 V~~v~~~~~~~-~l~sgs~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~--~-~~~~l~sg~~dg~i~vwd~~~~~~ 232 (536)
...++++|+.. ++++|+.||.|+||++... ..+..+.+|...|.++. | ++++|++|+.||+|++||+.++..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 34578888765 4446889999999999654 23456778998888776 6 889999999999999999977531
Q ss_pred ceecccCcccccceEEeeCCccCEEEEEE--eC-CEEEEEecCCeEEEEeCCCceEeEee--e-ccccEEEEe--ecCCE
Q 009373 233 HLFDISGSEKQNTQFRLWEHEGPITSLAL--DL-TRIYSGSWDMTVRVWDRALLKCLKVL--R-HSDWVYGLA--PHDTT 304 (536)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~-~~l~s~s~dg~i~iwd~~~~~~~~~~--~-~~~~v~~~~--~~~~~ 304 (536)
.. ........+.+|...|.+++| ++ +.|++++.||+|++||+.+++.+..+ . |...|.+++ +++.+
T Consensus 117 ~~------~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 117 VL------PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGAL 190 (402)
T ss_dssp SS------CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSC
T ss_pred cc------ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCE
Confidence 00 111356778899999999999 44 68999999999999999999999888 4 888999887 78888
Q ss_pred EEEec-CCcEEEEeCCCCcEEEEEccccccc-eEEEEEeCCCCEEEEE---cCCCcEEEEEcccCccccccceeeeccCC
Q 009373 305 VASTS-GSDVYIWDTNSGCLLTVVNGAHVGN-TKSLARSHTGDFLFTG---GEDGAIHMYEIINDCTEANVLLVATWIPH 379 (536)
Q Consensus 305 l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~-i~~l~~~~~~~~l~tg---~~dg~i~iwd~~~~~~~~~~~~~~~~~~h 379 (536)
|++++ |+.|++||+++++.+..+..+|.+. +.++.|+|++.+|++| +.|+.|++||+++.... .......|
T Consensus 191 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~----~~~~~~~~ 266 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEP----LSLQELDT 266 (402)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSC----SEEEECCC
T ss_pred EEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCC----ceEEeccC
Confidence 88888 9999999999999998884457765 8999999999999999 89999999999887321 11112357
Q ss_pred CCCeEEEEEcC--CeEE-EEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeec--cccccEEEEEecCCEEEE
Q 009373 380 TGPVNSLAFEF--PWLV-SAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLH--GFECNLLSVDIGADRIVC 454 (536)
Q Consensus 380 ~~~v~~l~~~~--~~l~-s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~l~s 454 (536)
...|.+++|+| .+|+ +|+.||.|++||+.+... ....+. .|...+.++.++++....
T Consensus 267 ~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~------------------~~~~l~~~~~~~~v~~~~~sp~~~~~ 328 (402)
T 2aq5_A 267 SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP------------------FLHYLSMFSSKESQRGMGYMPKRGLE 328 (402)
T ss_dssp CSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT------------------CEEEEEEECCSSCCSEEEECCGGGSC
T ss_pred CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc------------------ceEeecccccCCcccceEEecccccc
Confidence 78899999986 5665 555799999999987421 111122 244667777777662222
Q ss_pred ecCCCeEEEEeCCchh
Q 009373 455 GGEEGIVRIWNFSQAF 470 (536)
Q Consensus 455 g~~Dg~i~vW~~~~~~ 470 (536)
++.|+.+++|++.++.
T Consensus 329 ~s~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 329 VNKCEIARFYKLHERK 344 (402)
T ss_dssp GGGTEEEEEEEEETTE
T ss_pred eecceeEEEEEcCCCc
Confidence 3457799999998754
No 101
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=4.4e-31 Score=263.44 Aligned_cols=285 Identities=15% Similarity=0.140 Sum_probs=194.9
Q ss_pred CCCCceEEEEe--c-CCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE---eCCEEEEEe
Q 009373 197 KPLGCTIRAVA--A-DKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL---DLTRIYSGS 270 (536)
Q Consensus 197 ~~~~~~v~~~~--~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~---~~~~l~s~s 270 (536)
.+|...|.+++ | ++++|++|+.||+|++||+.++. ......+.+|.+.|++++| ++++|++|+
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~-----------~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s 184 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD-----------KPTFIKGIGAGGSITGLKFNPLNTNQFYASS 184 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS-----------CCEEECCCSSSCCCCEEEECSSCTTEEEEEC
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC-----------ceeEEEccCCCCCEEEEEEeCCCCCEEEEEe
Confidence 34555555554 6 56799999999999999997653 2344556789999999999 467999999
Q ss_pred cCCeEEEEeCCCceEeEeee---ccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCC
Q 009373 271 WDMTVRVWDRALLKCLKVLR---HSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTG 344 (536)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~ 344 (536)
.||+|++||++++....... +...+.+++ +++.+|++++ |+.|++||++. +.+..+. +|...|++++|+|++
T Consensus 185 ~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~-~h~~~v~~v~~~p~~ 262 (435)
T 4e54_B 185 MEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLR-MHKKKVTHVALNPCC 262 (435)
T ss_dssp SSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSB-CCSSCEEEEEECTTC
T ss_pred CCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEe-cccceEEeeeecCCC
Confidence 99999999998765544333 333455554 8899999998 89999999975 4455554 699999999999988
Q ss_pred C-EEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCc
Q 009373 345 D-FLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKR 421 (536)
Q Consensus 345 ~-~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 421 (536)
. +|++|+.|+.|++||+++.... ..+....+|...|++++|+| .+|++++.||.|+|||+.++...........
T Consensus 263 ~~~~~s~s~d~~v~iwd~~~~~~~---~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~ 339 (435)
T 4e54_B 263 DWFLATASVDQTVKIWDLRQVRGK---ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPH 339 (435)
T ss_dssp SSEEEEEETTSBCCEEETTTCCSS---SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCC
T ss_pred ceEEEEecCcceeeEEeccccccc---ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccc
Confidence 6 7889999999999999887322 23344568999999999986 6999999999999999987543322111100
Q ss_pred eeeEEeeCCCeeeeccccccEEEEE--ecCC-EEEEecCCCeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhhcc-cc
Q 009373 422 VSRVIEVEPPQRMLHGFECNLLSVD--IGAD-RIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLENRMRRRKLQT-EM 497 (536)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~-~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 497 (536)
.. ...................+. .++. .++++..++.|++||..++..+...... ....+.++ +|
T Consensus 340 ~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~---------~~~~v~s~~~f 408 (435)
T 4e54_B 340 RH--FQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDP---------ESSGISSLNEF 408 (435)
T ss_dssp CC--CSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCS---------SCCCCCCEEEE
T ss_pred cc--cccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCC---------CCCcEEEEEEE
Confidence 00 000000000011111222222 2333 3444455678999999998765432111 11223454 69
Q ss_pred ccCCCCcceeE
Q 009373 498 SSKGGRTDQCS 508 (536)
Q Consensus 498 ~~~g~~~~~~~ 508 (536)
+|+|..|++++
T Consensus 409 spdg~~lasg~ 419 (435)
T 4e54_B 409 NPMGDTLASAM 419 (435)
T ss_dssp CTTSSCEEEEC
T ss_pred CCCCCEEEEEc
Confidence 99999998753
No 102
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.2e-29 Score=245.04 Aligned_cols=250 Identities=18% Similarity=0.190 Sum_probs=197.6
Q ss_pred ceeeeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEe----CC
Q 009373 191 FSIASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD----LT 264 (536)
Q Consensus 191 ~~~~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~ 264 (536)
+.+..+.+|...|.++. +++++|++|+.||.|++||+.... ......+.+|.+.|.+++|. ++
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~~ 70 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-----------HKLIDTLTGHEGPVWRVDWAHPKFGT 70 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE-----------EEEEEEECCCSSCEEEEEECCGGGCS
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc-----------ceeeeEecCCCCcEEEEEeCCCCCCC
Confidence 45566788888887765 889999999999999999986421 33566788999999999993 78
Q ss_pred EEEEEecCCeEEEEeCCCce--EeEeee-ccccEEEEe--ec--CCEEEEec-CCcEEEEeCCCCcE--EEEEccccccc
Q 009373 265 RIYSGSWDMTVRVWDRALLK--CLKVLR-HSDWVYGLA--PH--DTTVASTS-GSDVYIWDTNSGCL--LTVVNGAHVGN 334 (536)
Q Consensus 265 ~l~s~s~dg~i~iwd~~~~~--~~~~~~-~~~~v~~~~--~~--~~~l~~~~-d~~i~i~d~~~~~~--~~~~~~~~~~~ 334 (536)
+|++|+.||.|++||+.+++ ....+. |...|.++. ++ +.++++++ |+.|++||++++.. ...+ .+|...
T Consensus 71 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~~ 149 (379)
T 3jrp_A 71 ILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-DAHAIG 149 (379)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE-ECCTTC
T ss_pred EEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe-cCCCCc
Confidence 99999999999999999987 455554 888999988 66 78888888 89999999998733 3333 368999
Q ss_pred eEEEEEeC-------------CCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC-----CeEEEE
Q 009373 335 TKSLARSH-------------TGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF-----PWLVSA 396 (536)
Q Consensus 335 i~~l~~~~-------------~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~ 396 (536)
|.+++|+| ++.+|++|+.||.|++||++.+.. .......+.+|...|.+++|+| .+|+++
T Consensus 150 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 150 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ--TYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp EEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTT--EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred eEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc--ceeeEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence 99999999 699999999999999999987632 1235567889999999999985 489999
Q ss_pred eCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecC--CEEEEecCCCeEEEEeCCc
Q 009373 397 AGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGA--DRIVCGGEEGIVRIWNFSQ 468 (536)
Q Consensus 397 s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~sg~~Dg~i~vW~~~~ 468 (536)
+.||.|++||+++...... ........|...+.++.+++ .+|++++.||.|++|++..
T Consensus 228 ~~dg~i~iwd~~~~~~~~~--------------~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 228 SQDRTCIIWTQDNEQGPWK--------------KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp ETTSCEEEEEESSTTSCCE--------------EEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred eCCCEEEEEeCCCCCccce--------------eeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 9999999999987421110 00011233566677766654 5999999999999999984
No 103
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=2.5e-30 Score=255.54 Aligned_cols=313 Identities=17% Similarity=0.166 Sum_probs=228.5
Q ss_pred CCcEEEEECCCCceeeeeCCCCceEEEEe--c-CCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccC
Q 009373 179 DSIVRMWHLEDGFSIASSKPLGCTIRAVA--A-DKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGP 255 (536)
Q Consensus 179 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 255 (536)
++.+++|+++.++....+.+|...|.++. | ++++|++|+.||.|++||+.++....................+|...
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 45678888888888888889999888776 7 89999999999999999998764211000000000000011359999
Q ss_pred EEEEEE---eCCEEEEEecCCeEEEEeCCCceEeEeeeccccEEEEe--e---cCCEEEEec-CCcEEEEeCCCCcEEEE
Q 009373 256 ITSLAL---DLTRIYSGSWDMTVRVWDRALLKCLKVLRHSDWVYGLA--P---HDTTVASTS-GSDVYIWDTNSGCLLTV 326 (536)
Q Consensus 256 v~~l~~---~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~--~---~~~~l~~~~-d~~i~i~d~~~~~~~~~ 326 (536)
|.+++| ++..|++++.||.|++||+.+++....+.+...+.++. + ++.++++++ ++.|++||+++++.+..
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 181 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHI 181 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEE
T ss_pred EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeee
Confidence 999999 44689999999999999999999999998888888776 3 445888877 89999999999998888
Q ss_pred EccccccceEEEEEeCCCC-EEEEEcCCCcEEEEEcccCcccc----------ccceeeeccCCCCCeEEEEEcC--CeE
Q 009373 327 VNGAHVGNTKSLARSHTGD-FLFTGGEDGAIHMYEIINDCTEA----------NVLLVATWIPHTGPVNSLAFEF--PWL 393 (536)
Q Consensus 327 ~~~~~~~~i~~l~~~~~~~-~l~tg~~dg~i~iwd~~~~~~~~----------~~~~~~~~~~h~~~v~~l~~~~--~~l 393 (536)
+. +|...|.+++|+|++. +|++|+.||.|++||++...... .........+|...|.+++|+| .+|
T Consensus 182 ~~-~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 260 (408)
T 4a11_B 182 LQ-GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHL 260 (408)
T ss_dssp EC-CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEE
T ss_pred ec-CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEE
Confidence 85 6999999999999998 58999999999999998763110 0011222367999999999986 699
Q ss_pred EEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEe-cCCEEEEecCCCeEEEEeCCchhhH
Q 009373 394 VSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDI-GADRIVCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 394 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~sg~~Dg~i~vW~~~~~~~~ 472 (536)
++++.||.|++||+.+............ ............. ....+++++.||.|++||+.++..+
T Consensus 261 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 327 (408)
T 4a11_B 261 LTVGTDNRMRLWNSSNGENTLVNYGKVC-------------NNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI 327 (408)
T ss_dssp EEEETTSCEEEEETTTCCBCCCCCCCCC-------------CCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE
T ss_pred EEecCCCeEEEEECCCCccceecccccc-------------ccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce
Confidence 9999999999999998654332211100 0001111112222 2346777788999999999988765
Q ss_pred HHHHHhhhcccchhHHHhhhhccccccCCCCcceeEeecccCC
Q 009373 473 ERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQCSVAAKKNP 515 (536)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 515 (536)
..... ....+.+++|+|+|..+++++.+.....
T Consensus 328 ~~~~~----------~~~~v~~~~~s~~~~~l~s~~~dg~i~i 360 (408)
T 4a11_B 328 TMLKG----------HYKTVDCCVFQSNFQELYSGSRDCNILA 360 (408)
T ss_dssp EEECC----------CSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred eeecc----------CCCeEEEEEEcCCCCEEEEECCCCeEEE
Confidence 43211 2244678999999999999876654433
No 104
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=2e-29 Score=251.03 Aligned_cols=257 Identities=16% Similarity=0.189 Sum_probs=208.2
Q ss_pred CccceeeeeCccccEEEEEEecC-CCEEEEEeCCCcEEEEECCC----------CceeeeeCCCCceEEEEe--cCCC-E
Q 009373 147 GRYSIDVLYGHTEAVLTVFVLAS-AKLLFTSGYDSIVRMWHLED----------GFSIASSKPLGCTIRAVA--ADKK-L 212 (536)
Q Consensus 147 ~~~~~~~l~~h~~~V~~v~~~~~-~~~l~sgs~dg~v~iwd~~~----------~~~~~~~~~~~~~v~~~~--~~~~-~ 212 (536)
++.......+|.+.|++++|+|+ +.+|++|+.||.|++|++.+ ...+..+.+|...+.+++ +++. +
T Consensus 117 ~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 196 (430)
T 2xyi_A 117 GKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGY 196 (430)
T ss_dssp -CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTE
T ss_pred CceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCe
Confidence 44556677899999999999997 78999999999999999986 567777888887776554 7777 9
Q ss_pred EEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE---eCCEEEEEecCCeEEEEeCCCc---eEe
Q 009373 213 LVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL---DLTRIYSGSWDMTVRVWDRALL---KCL 286 (536)
Q Consensus 213 l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~---~~~~l~s~s~dg~i~iwd~~~~---~~~ 286 (536)
|++|+.||.|++|++.++... .........+.+|...|.+++| ++..|++++.||.|++||++++ +..
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~------~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKE------HRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBG------GGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCS
T ss_pred EEEEeCCCeEEEEeCCCCCCC------CceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcce
Confidence 999999999999999764210 0111224566789999999999 4578999999999999999987 455
Q ss_pred Eeee-ccccEEEEe--ecCC-EEEEec-CCcEEEEeCCC-CcEEEEEccccccceEEEEEeCCCC-EEEEEcCCCcEEEE
Q 009373 287 KVLR-HSDWVYGLA--PHDT-TVASTS-GSDVYIWDTNS-GCLLTVVNGAHVGNTKSLARSHTGD-FLFTGGEDGAIHMY 359 (536)
Q Consensus 287 ~~~~-~~~~v~~~~--~~~~-~l~~~~-d~~i~i~d~~~-~~~~~~~~~~~~~~i~~l~~~~~~~-~l~tg~~dg~i~iw 359 (536)
..+. |...|.+++ |++. ++++++ |+.|++||+++ +..+..+. +|...|++++|+|++. +|++++.||.|++|
T Consensus 271 ~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iw 349 (430)
T 2xyi_A 271 HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVW 349 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSCCEEE
T ss_pred eEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEEEEEeCCCcEEEE
Confidence 5664 888999888 6565 677777 89999999998 45666665 6999999999999985 69999999999999
Q ss_pred EcccCcccc--------ccceeeeccCCCCCeEEEEEcC--C-eEEEEeCCCcEEEEECCcc
Q 009373 360 EIINDCTEA--------NVLLVATWIPHTGPVNSLAFEF--P-WLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 360 d~~~~~~~~--------~~~~~~~~~~h~~~v~~l~~~~--~-~l~s~s~dg~i~vwd~~~~ 410 (536)
|+....... ....+..+.+|...|++++|+| . +|++++.||.|++|++...
T Consensus 350 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 350 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred eCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 998742211 1246677889999999999987 3 8999999999999999864
No 105
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=1.4e-29 Score=253.61 Aligned_cols=287 Identities=11% Similarity=0.129 Sum_probs=202.3
Q ss_pred CceEEE--EecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCc------------cCEEEEEE--eC
Q 009373 200 GCTIRA--VAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHE------------GPITSLAL--DL 263 (536)
Q Consensus 200 ~~~v~~--~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~------------~~v~~l~~--~~ 263 (536)
...|.+ ++|++++|++|+.||.|++||+.++..... ...........+.+|. +.|.+++| ++
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~--~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQS--HSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----C--CCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCc--ccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 445554 559999999999999999999977531100 0011122466778898 88999999 44
Q ss_pred --CEEEEEecCCeEEEEeCCCceEe---------------------------------------Eee--eccccEEEEe-
Q 009373 264 --TRIYSGSWDMTVRVWDRALLKCL---------------------------------------KVL--RHSDWVYGLA- 299 (536)
Q Consensus 264 --~~l~s~s~dg~i~iwd~~~~~~~---------------------------------------~~~--~~~~~v~~~~- 299 (536)
..|++++.||+|++||+.++... ..+ .|...|.+++
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 68999999999999998765442 122 2888888887
Q ss_pred -ecCCEEEEecCCcEEEEeCCC-CcEEEEE------ccccccceEEEEEeCCC-CEEEEEcCCCcEEEEEcccCcccccc
Q 009373 300 -PHDTTVASTSGSDVYIWDTNS-GCLLTVV------NGAHVGNTKSLARSHTG-DFLFTGGEDGAIHMYEIINDCTEANV 370 (536)
Q Consensus 300 -~~~~~l~~~~d~~i~i~d~~~-~~~~~~~------~~~~~~~i~~l~~~~~~-~~l~tg~~dg~i~iwd~~~~~~~~~~ 370 (536)
+++++++++.|+.|++||+++ ++.+..+ ..+|...|++++|+|++ .+|++|+.||.|++||++++....
T Consensus 186 ~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-- 263 (447)
T 3dw8_B 186 NSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD-- 263 (447)
T ss_dssp CTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC--
T ss_pred cCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc--
Confidence 889999998899999999994 4444432 24689999999999998 999999999999999999873110
Q ss_pred ceeeeccCCCC------------CeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeec
Q 009373 371 LLVATWIPHTG------------PVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLH 436 (536)
Q Consensus 371 ~~~~~~~~h~~------------~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (536)
..+..+.+|.. .|.+++|+| .+|++++. +.|++||+++... +...+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~------------------~~~~~~ 324 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR------------------PVETYQ 324 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS------------------CSCCEE
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc------------------ccceee
Confidence 11566677765 999999986 68999988 9999999986211 111223
Q ss_pred ccccc-----------------EEEEEecCCEEEEecCCCeEEEEeCCchhhHHHHHHh--hh------c----------
Q 009373 437 GFECN-----------------LLSVDIGADRIVCGGEEGIVRIWNFSQAFEIERRARA--LR------G---------- 481 (536)
Q Consensus 437 ~~~~~-----------------v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~~~~~~~--~~------~---------- 481 (536)
+|... ..++++++.+|++|+.||.|++||+.++..+.-.... .+ .
T Consensus 325 ~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (447)
T 3dw8_B 325 VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRK 404 (447)
T ss_dssp SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCC
T ss_pred ccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcc
Confidence 33211 1466667779999999999999999987654200000 00 0
Q ss_pred ----ccchhHHHhhhhccccccCCCCcceeEe
Q 009373 482 ----IRLENRMRRRKLQTEMSSKGGRTDQCSV 509 (536)
Q Consensus 482 ----~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 509 (536)
.............++|+|+|..+|+++.
T Consensus 405 ~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~ 436 (447)
T 3dw8_B 405 KDEISVDSLDFNKKILHTAWHPKENIIAVATT 436 (447)
T ss_dssp TTCEEGGGCCTTSCCCEEEECSSSSEEEEECS
T ss_pred cccccccccccCCceeEEEECCCCCEEEEEec
Confidence 0000122345677999999999987643
No 106
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.9e-29 Score=249.02 Aligned_cols=245 Identities=16% Similarity=0.205 Sum_probs=199.7
Q ss_pred ceeeeeCccccEEEEEEec-CCCEEEEEeCCCcEEEEECCCC-------ceeeeeCCCCceEEEEe--cCC-CEEEEEeC
Q 009373 150 SIDVLYGHTEAVLTVFVLA-SAKLLFTSGYDSIVRMWHLEDG-------FSIASSKPLGCTIRAVA--ADK-KLLVAGGT 218 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~dg~v~iwd~~~~-------~~~~~~~~~~~~v~~~~--~~~-~~l~sg~~ 218 (536)
.+..+.+|.+.|++++|+| ++++|++|+.||+|++||+.++ +.+..+.+|...|.++. |++ ++|++|+.
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 4567889999999999999 8999999999999999999988 56778888988887765 776 69999999
Q ss_pred CCcEEEEEcccCccceecccCcccccceEEe--eCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEee-e-cc
Q 009373 219 DGFIHCWRAVEVLPHLFDISGSEKQNTQFRL--WEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVL-R-HS 292 (536)
Q Consensus 219 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~-~~ 292 (536)
||.|++||+.++. ....+ .+|.+.|.+++| ++++|++++.||.|++||+++++.+..+ . |.
T Consensus 153 dg~i~iwd~~~~~-------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 219 (402)
T 2aq5_A 153 DNVILVWDVGTGA-------------AVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHE 219 (402)
T ss_dssp TSCEEEEETTTTE-------------EEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSC
T ss_pred CCEEEEEECCCCC-------------ccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCC
Confidence 9999999997653 45556 689999999999 7789999999999999999999998887 3 55
Q ss_pred cc-EEEEe--ecCCEEEEe---c-CCcEEEEeCCCCcE-EEEEccccccceEEEEEeCCCCEEE-EEcCCCcEEEEEccc
Q 009373 293 DW-VYGLA--PHDTTVAST---S-GSDVYIWDTNSGCL-LTVVNGAHVGNTKSLARSHTGDFLF-TGGEDGAIHMYEIIN 363 (536)
Q Consensus 293 ~~-v~~~~--~~~~~l~~~---~-d~~i~i~d~~~~~~-~~~~~~~~~~~i~~l~~~~~~~~l~-tg~~dg~i~iwd~~~ 363 (536)
.. +.++. +++.+++++ + ++.|++||+++++. +......|...+.+++|+|++++|+ +|+.||.|++||+.+
T Consensus 220 ~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 220 GTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp SSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred CCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 43 55554 889999998 4 89999999998764 3333335778899999999999886 566899999999988
Q ss_pred CccccccceeeeccCCCCCeEEEEEcCCeEEEEeCCCcEEEEECCcc
Q 009373 364 DCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 364 ~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~ 410 (536)
+... ...+..+. |..+|.+++|+|+..+.++.++.+++|++.+.
T Consensus 300 ~~~~--~~~l~~~~-~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 300 EAPF--LHYLSMFS-SKESQRGMGYMPKRGLEVNKCEIARFYKLHER 343 (402)
T ss_dssp STTC--EEEEEEEC-CSSCCSEEEECCGGGSCGGGTEEEEEEEEETT
T ss_pred CCcc--eEeecccc-cCCcccceEEecccccceecceeEEEEEcCCC
Confidence 7310 12233332 67999999999843333457789999999763
No 107
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3e-28 Score=244.14 Aligned_cols=273 Identities=10% Similarity=0.057 Sum_probs=209.0
Q ss_pred cccEEEEEEecCCCEEEEEeCCCcEEEEECCCCc---eeeeeCCC-----------------------------------
Q 009373 158 TEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGF---SIASSKPL----------------------------------- 199 (536)
Q Consensus 158 ~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~---~~~~~~~~----------------------------------- 199 (536)
..++.+++|+|+|++|+++ .++.|++||+.+|+ .+..+..+
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578999999999977666 47899999999998 55544322
Q ss_pred -------------------CceEEEE--ecCCCEE-EEEeCCCcEEEEEcc--cCccceecccCcccccceEEee--CCc
Q 009373 200 -------------------GCTIRAV--AADKKLL-VAGGTDGFIHCWRAV--EVLPHLFDISGSEKQNTQFRLW--EHE 253 (536)
Q Consensus 200 -------------------~~~v~~~--~~~~~~l-~sg~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~--~h~ 253 (536)
...|.++ +|++++| ++|+.||.|++||+. ++. ....+. .|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~-------------~~~~~~~~~~~ 149 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN-------------VLKLRKRFCFS 149 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS-------------CEEEEEEEECS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc-------------eeeeeecccCC
Confidence 2245554 5899986 899999999999997 442 333333 677
Q ss_pred cCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeE----eee-ccccEEEEe--ec---CCEEEEec-CCcEEEEeCCC
Q 009373 254 GPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLK----VLR-HSDWVYGLA--PH---DTTVASTS-GSDVYIWDTNS 320 (536)
Q Consensus 254 ~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~----~~~-~~~~v~~~~--~~---~~~l~~~~-d~~i~i~d~~~ 320 (536)
..|.+++| ++.+|++|+.||.|++|++.+++... .+. |...|.++. |+ +++|++++ |+.|++||+++
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~ 229 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ 229 (450)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC
T ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC
Confidence 89999999 67899999999999999998877553 444 888999887 77 87898888 89999999999
Q ss_pred CcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeecc-----------------------
Q 009373 321 GCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWI----------------------- 377 (536)
Q Consensus 321 ~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~----------------------- 377 (536)
++.+..+..+|...|++++|+ ++.+|++|+.|+.|++||+.++. .+..+.
T Consensus 230 ~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (450)
T 2vdu_B 230 CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK------NLSTFDYNSLIKPYLNDQHLAPPRFQNEN 302 (450)
T ss_dssp TTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC------EEEEEECHHHHGGGCCTTSBC--------
T ss_pred CceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc------Eeeeecchhhhhhhhhhcccccccccccc
Confidence 998888666799999999999 99999999999999999999873 333322
Q ss_pred --CCCCCeEEEEEcC--CeEEEEe-CCCcEEEEEC--CcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC
Q 009373 378 --PHTGPVNSLAFEF--PWLVSAA-GDGKLSLIDV--RKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD 450 (536)
Q Consensus 378 --~h~~~v~~l~~~~--~~l~s~s-~dg~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 450 (536)
.....|.+++|+| .+|++++ .|+.|++|++ .+... . .....+.++ ..+.+++++++
T Consensus 303 ~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~---------l-------~~~~~~~~~-~~v~~~~~~~~ 365 (450)
T 2vdu_B 303 NDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGD---------L-------ALKQIITFP-YNVISLSAHND 365 (450)
T ss_dssp --CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTC---------E-------EEEEEEECS-SCEEEEEEETT
T ss_pred cccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCc---------e-------eeccEeccC-CceEEEEecCC
Confidence 2345789999986 6888888 8999999999 32100 0 112233445 66788888777
Q ss_pred -EEEEecC-------CCeEEEEeCCc
Q 009373 451 -RIVCGGE-------EGIVRIWNFSQ 468 (536)
Q Consensus 451 -~l~sg~~-------Dg~i~vW~~~~ 468 (536)
.+++.+. +..|.+|.+..
T Consensus 366 ~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 366 EFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp EEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred cEEEEEecccCCCCCCcceEEEEEEc
Confidence 4444433 55688888754
No 108
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.1e-29 Score=240.33 Aligned_cols=269 Identities=8% Similarity=-0.013 Sum_probs=193.8
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCccccc
Q 009373 165 FVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQN 244 (536)
Q Consensus 165 ~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 244 (536)
.+.+++.+|++|+.||+|++||+.+++.+..+. ...+.++..... +++|+.|++|++|+..... ..++... ..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~-~~~~~~~---~~ 115 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQI-TILDSKT---NK 115 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS-EEEECSTTEEEEEETTTEE-EEEETTT---CC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc-eEEecCCCeEEEEEccCce-EEeecCC---cc
Confidence 445678899999999999999999998887765 233333332223 9999999999999876421 1122211 11
Q ss_pred ceEE-eeCCccCEEEEEE----eCCEEEEEecCCeEEEEeCCCceEeEeee--ccccEEEEe--ecCCEEEEec-CCcEE
Q 009373 245 TQFR-LWEHEGPITSLAL----DLTRIYSGSWDMTVRVWDRALLKCLKVLR--HSDWVYGLA--PHDTTVASTS-GSDVY 314 (536)
Q Consensus 245 ~~~~-~~~h~~~v~~l~~----~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~--~~~~~l~~~~-d~~i~ 314 (536)
.... ..+|.+.|.++++ +++++++|+.||+|++||+++++...... +...+.+++ |++.++++|+ |+.|+
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 1222 2367789999999 45789999999999999999999876664 555677776 8899999988 99999
Q ss_pred EEeCCCCcEE-EEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeE--EEEEcC-
Q 009373 315 IWDTNSGCLL-TVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVN--SLAFEF- 390 (536)
Q Consensus 315 i~d~~~~~~~-~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~--~l~~~~- 390 (536)
+||+++++.+ ..+..+|.+.|++++|+|++.+|++++ |+.|++||++..... ..+..+..|...+. +++|+|
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGT---LAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp EEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTC---BSSCCCBC-----CCEEEEECTT
T ss_pred EEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcc---eeecccccccccccceEEEECCC
Confidence 9999999887 677544999999999999999999999 559999999987321 12222233445554 699986
Q ss_pred -CeEEEEeC-CCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEe-----cCCEEEEecCCCeEEE
Q 009373 391 -PWLVSAAG-DGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDI-----GADRIVCGGEEGIVRI 463 (536)
Q Consensus 391 -~~l~s~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~sg~~Dg~i~v 463 (536)
.+|++++. |+.|++|++.+..+.+.. ..+..+.+ +...+++++.||.+++
T Consensus 272 g~~l~~~s~~d~~i~v~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~ 328 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFDKKTKNWTK-----------------------DEESALCLQSDTADFTDMDVVCGDGGIAA 328 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCSEEE-----------------------EEEEECCC----CCCCEEEEEEETTEEEE
T ss_pred CCEEEEecCCCCcEEEEEEcccccceEe-----------------------cCceeEecCccccccceeEEEecCCceEE
Confidence 79999998 999999999764322110 11222222 3348888888888888
Q ss_pred EeCC
Q 009373 464 WNFS 467 (536)
Q Consensus 464 W~~~ 467 (536)
+-..
T Consensus 329 ~~~~ 332 (343)
T 3lrv_A 329 ILKT 332 (343)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7544
No 109
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=2.9e-28 Score=237.09 Aligned_cols=297 Identities=13% Similarity=0.170 Sum_probs=216.2
Q ss_pred EEECCCCceeeeeCCCCceEEEEe--cC---CCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEE
Q 009373 184 MWHLEDGFSIASSKPLGCTIRAVA--AD---KKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITS 258 (536)
Q Consensus 184 iwd~~~~~~~~~~~~~~~~v~~~~--~~---~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 258 (536)
.|+....+.+..+.+|...|.++. |+ +++|++|+.||.|++||+.+.. ......+.+|.+.|.+
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~-----------~~~~~~~~~h~~~v~~ 91 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG-----------QTIPKAQQMHTGPVLD 91 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS-----------CEEEEEEEECSSCEEE
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC-----------ceeEEEeccccCCEEE
Confidence 345566677888899999888876 66 5899999999999999997621 2233667789999999
Q ss_pred EEE--eCCEEEEEecCCeEEEEeCCCceEeEeeeccccEEEEe----ecCCEEEEec-CCcEEEEeCCCCcEEEEEcccc
Q 009373 259 LAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLRHSDWVYGLA----PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAH 331 (536)
Q Consensus 259 l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~----~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~ 331 (536)
++| ++++|++++.||.|++||+.+++......|...|.++. +++.++++++ |+.|++||+++++.+..+. .
T Consensus 92 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~ 169 (368)
T 3mmy_A 92 VCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ--L 169 (368)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEE--C
T ss_pred EEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEe--c
Confidence 999 67899999999999999999999988888999999886 4677788887 8999999999999888885 3
Q ss_pred ccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEE--cCC----eEEEEeCCCcEEEE
Q 009373 332 VGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAF--EFP----WLVSAAGDGKLSLI 405 (536)
Q Consensus 332 ~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~----~l~s~s~dg~i~vw 405 (536)
...+.++.+. +..+++++.++.+++|+++..... ..... ..+...+.++.+ ++. .+++++.||.|++|
T Consensus 170 ~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~ 243 (368)
T 3mmy_A 170 PERCYCADVI--YPMAVVATAERGLIVYQLENQPSE--FRRIE--SPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIH 243 (368)
T ss_dssp SSCEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEE--EEECC--CSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEE
T ss_pred CCCceEEEec--CCeeEEEeCCCcEEEEEeccccch--hhhcc--ccccCCCceEEEcccCCCCCCeEEEecCCCcEEEE
Confidence 3466666665 458889999999999999876321 11122 223344444444 433 49999999999999
Q ss_pred ECCcccc---cCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--EEEEecCCCeEEEEeCCchhhHHHHHHhhh
Q 009373 406 DVRKLLR---SGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RIVCGGEEGIVRIWNFSQAFEIERRARALR 480 (536)
Q Consensus 406 d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~ 480 (536)
|++.... ....... ..........+|...+.++.++++ +|++|+.||.|++||+.++..+....
T Consensus 244 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---- 312 (368)
T 3mmy_A 244 YINPPNPAKDNFTFKCH-------RSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE---- 312 (368)
T ss_dssp ESSCSCHHHHSEEEECS-------EEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC----
T ss_pred ecCCCCccccceeeeee-------ecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec----
Confidence 9987421 0000000 000000111223336777776654 99999999999999999876654321
Q ss_pred cccchhHHHhhhhccccccCCCCcceeEeecccCCc
Q 009373 481 GIRLENRMRRRKLQTEMSSKGGRTDQCSVAAKKNPM 516 (536)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 516 (536)
.......+++|+|+|..+++++.+.....+
T Consensus 313 ------~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 313 ------QLDQPISACCFNHNGNIFAYASSYDWSKGH 342 (368)
T ss_dssp ------CCSSCEEEEEECTTSSCEEEEECCCSTTCG
T ss_pred ------CCCCCceEEEECCCCCeEEEEecccccccc
Confidence 123456789999999999999887655444
No 110
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=5e-28 Score=240.88 Aligned_cols=261 Identities=16% Similarity=0.236 Sum_probs=196.4
Q ss_pred eCCCCceEEE--EecC-CCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCC-EEEEE
Q 009373 196 SKPLGCTIRA--VAAD-KKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLT-RIYSG 269 (536)
Q Consensus 196 ~~~~~~~v~~--~~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~-~l~s~ 269 (536)
...|...|.+ ++|+ +.+|++|+.||.|++|++.+..... ...........+.+|...|.+++| ++. +|++|
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~---~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKP---EPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSC---CTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCccccc---CccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 3455555544 4575 6799999999999999997631110 001113466778899999999999 344 99999
Q ss_pred ecCCeEEEEeCCCceE-------eEee-eccccEEEEe--e-cCCEEEEec-CCcEEEEeCCCC---cEEEEEccccccc
Q 009373 270 SWDMTVRVWDRALLKC-------LKVL-RHSDWVYGLA--P-HDTTVASTS-GSDVYIWDTNSG---CLLTVVNGAHVGN 334 (536)
Q Consensus 270 s~dg~i~iwd~~~~~~-------~~~~-~~~~~v~~~~--~-~~~~l~~~~-d~~i~i~d~~~~---~~~~~~~~~~~~~ 334 (536)
+.||+|++||+.++.. ...+ .|...|.+++ | ++.++++++ ++.|++||++++ +.+..+. .|...
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~ 279 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHTAE 279 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-CCSSC
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-cCCCC
Confidence 9999999999987322 2333 3888899988 4 577888887 899999999987 4666664 69999
Q ss_pred eEEEEEeCCCC-EEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC---CeEEEEeCCCcEEEEECCcc
Q 009373 335 TKSLARSHTGD-FLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF---PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 335 i~~l~~~~~~~-~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~ 410 (536)
|++++|+|++. ++++|+.||.|++||++... .++..+.+|...|++++|+| .+|++++.||.|++||+...
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-----~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLK-----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTT-----SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-----CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 99999999987 68899999999999998853 46777889999999999987 46999999999999999873
Q ss_pred cccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC---EEEEecCCCeEEEEeCCchh
Q 009373 411 LRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD---RIVCGGEEGIVRIWNFSQAF 470 (536)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l~sg~~Dg~i~vW~~~~~~ 470 (536)
......... ............+|...+.+++++++ +|++++.||.|++|++.++.
T Consensus 355 ~~~~~~~~~-----~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 355 GEEQSTEDA-----EDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp TCCCCHHHH-----HHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred ccccCcccc-----ccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 221100000 00001233445678888888887765 89999999999999998653
No 111
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=2.1e-28 Score=235.85 Aligned_cols=274 Identities=10% Similarity=0.081 Sum_probs=210.6
Q ss_pred eCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCC-EEEEEe
Q 009373 196 SKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLT-RIYSGS 270 (536)
Q Consensus 196 ~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~-~l~s~s 270 (536)
..+|...|.++. |++.+|++|+.||.|++|++.++.. ......+.+|...|.+++| +++ +|++|+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK----------NVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT----------EEEEEEEEECSSCEEEEEEEESSSEEEEEEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCc----------cccceeeeecCCceEEEEECCCCCcEEEEEc
Confidence 457877777665 8999999999999999999976521 1124455689999999999 678 899999
Q ss_pred cCCeEEEEeC-CCceEeEeee--ccccEEEEe--ecCCEEEEec-CCcEEEEeCCC---------CcEEEEEccccccce
Q 009373 271 WDMTVRVWDR-ALLKCLKVLR--HSDWVYGLA--PHDTTVASTS-GSDVYIWDTNS---------GCLLTVVNGAHVGNT 335 (536)
Q Consensus 271 ~dg~i~iwd~-~~~~~~~~~~--~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~---------~~~~~~~~~~~~~~i 335 (536)
.||.|++||+ .+++...... |...|.++. + +..+++++ |+.|++||+++ ++.+..+. |...+
T Consensus 77 ~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~v 153 (342)
T 1yfq_A 77 VQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK--VKNKI 153 (342)
T ss_dssp TTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS--SCCCE
T ss_pred CCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe--eCCce
Confidence 9999999999 8887765556 889999988 5 88888888 89999999987 66666653 88999
Q ss_pred EEEEEeCCCCEEEEEcCCCcEEEEEccc-CccccccceeeeccCCCCCeEEEEEcC---CeEEEEeCCCcEEEEECCccc
Q 009373 336 KSLARSHTGDFLFTGGEDGAIHMYEIIN-DCTEANVLLVATWIPHTGPVNSLAFEF---PWLVSAAGDGKLSLIDVRKLL 411 (536)
Q Consensus 336 ~~l~~~~~~~~l~tg~~dg~i~iwd~~~-~~~~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~ 411 (536)
.+++|+|++ +++++.||.|++||+++ ... ........|...|.+++|+| .++++++.||.|++|+++...
T Consensus 154 ~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~----~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~ 227 (342)
T 1yfq_A 154 FTMDTNSSR--LIVGMNNSQVQWFRLPLCEDD----NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG 227 (342)
T ss_dssp EEEEECSSE--EEEEESTTEEEEEESSCCTTC----CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTC
T ss_pred EEEEecCCc--EEEEeCCCeEEEEECCccccc----cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCC
Confidence 999999887 99999999999999988 421 12334457889999999986 699999999999999997640
Q ss_pred ccCCCCCCCceeeEEeeCCCeeeeccc---------cccEEEEEecC--CEEEEecCCCeEEEEeCCchhhHHHHHHhhh
Q 009373 412 RSGRPTSGKRVSRVIEVEPPQRMLHGF---------ECNLLSVDIGA--DRIVCGGEEGIVRIWNFSQAFEIERRARALR 480 (536)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~--~~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~ 480 (536)
.... ......+.+| ...+.++.+++ ++|++|+.||.|++||+.++..+......
T Consensus 228 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-- 292 (342)
T 1yfq_A 228 DDYN-------------SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-- 292 (342)
T ss_dssp CSTT-------------CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC--
T ss_pred cccc-------------cccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcc--
Confidence 0000 0111223333 34777777654 59999999999999999988765432111
Q ss_pred cccchhHHHhhhhccccccCCCCcceeEeecc
Q 009373 481 GIRLENRMRRRKLQTEMSSKGGRTDQCSVAAK 512 (536)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 512 (536)
....+.+++ |+|..+++++.+..
T Consensus 293 -------h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 293 -------NEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp -------SSSEEEEEE--ECSSEEEEEEECTH
T ss_pred -------cCCCceEec--CCCCeEEEEecCCc
Confidence 022345666 99999999998877
No 112
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=2.1e-28 Score=237.64 Aligned_cols=235 Identities=10% Similarity=0.115 Sum_probs=181.0
Q ss_pred eeeeCccccEEEEEEecCCCEEEEEe-----------CCCcEEEEECCCCceee----ee-----CCCC--ceEEEEecC
Q 009373 152 DVLYGHTEAVLTVFVLASAKLLFTSG-----------YDSIVRMWHLEDGFSIA----SS-----KPLG--CTIRAVAAD 209 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~~~~l~sgs-----------~dg~v~iwd~~~~~~~~----~~-----~~~~--~~v~~~~~~ 209 (536)
..|.+|.+.|++++++ ++.+++|. .|+++++|++.+..... .. ..+. ..+.+|+||
T Consensus 67 ~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD 144 (365)
T 4h5i_A 67 FALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 144 (365)
T ss_dssp EECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT
T ss_pred EEccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC
Confidence 4678999999998775 66777664 57889999987653211 11 1122 346788899
Q ss_pred CCEEEEE--eCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceE
Q 009373 210 KKLLVAG--GTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKC 285 (536)
Q Consensus 210 ~~~l~sg--~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~ 285 (536)
|++++++ +.|++|++||+.++. ....+ .|.+.|.+++| ++.++++++.| .+++|+..+++.
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~-------------~~~~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~ 209 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLT-------------EKFEI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSC 209 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTE-------------EEEEE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCE
T ss_pred CCEEEEEECCCCCEEEEeECCCCc-------------EEEEe-CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcc
Confidence 9987654 478999999997753 33344 47888999999 77889888855 566666666665
Q ss_pred eEeee---ccccEEEEe--ecCCEEEEec-CC----cEEEEeCCCCcEE----EEEccccccceEEEEEeCCCCEEEEEc
Q 009373 286 LKVLR---HSDWVYGLA--PHDTTVASTS-GS----DVYIWDTNSGCLL----TVVNGAHVGNTKSLARSHTGDFLFTGG 351 (536)
Q Consensus 286 ~~~~~---~~~~v~~~~--~~~~~l~~~~-d~----~i~i~d~~~~~~~----~~~~~~~~~~i~~l~~~~~~~~l~tg~ 351 (536)
..... |...|.+++ |++..+++++ ++ .+++||+...... ..+ .+|...|++++|+|+|++||+|+
T Consensus 210 ~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~V~~~~~Spdg~~lasgs 288 (365)
T 4h5i_A 210 IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQV-TNRFKGITSMDVDMKGELAVLAS 288 (365)
T ss_dssp EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEE-ESSCSCEEEEEECTTSCEEEEEE
T ss_pred eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeee-cCCCCCeEeEEECCCCCceEEEc
Confidence 54322 777888876 8999999887 55 5888998776542 233 36889999999999999999999
Q ss_pred CCCcEEEEEcccCccccccceeee-ccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcc
Q 009373 352 EDGAIHMYEIINDCTEANVLLVAT-WIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 352 ~dg~i~iwd~~~~~~~~~~~~~~~-~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~ 410 (536)
.|++|+|||+.++ .++.. +.+|..+|++++|+| .+|++||.|++|+|||+...
T Consensus 289 ~D~~V~iwd~~~~------~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 289 NDNSIALVKLKDL------SMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TTSCEEEEETTTT------EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCCEEEEEECCCC------cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999999988 56665 579999999999987 79999999999999999653
No 113
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.7e-28 Score=234.31 Aligned_cols=254 Identities=11% Similarity=0.040 Sum_probs=188.5
Q ss_pred cCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCC------
Q 009373 208 ADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRA------ 281 (536)
Q Consensus 208 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~------ 281 (536)
+++..+++|+.||+|++||+.++. ....+. ...|.++.+.+. +++++.|++|++|+..
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~-------------~~~~~~--~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~ 109 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSK-------------TITTIT--TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITIL 109 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSS-------------CEEEEE--EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCc-------------EEEEEe--cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEe
Confidence 678899999999999999998764 222222 455666777666 9999999999999765
Q ss_pred ---CceEeEeee--ccccEEEEe--e--cCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEc
Q 009373 282 ---LLKCLKVLR--HSDWVYGLA--P--HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGG 351 (536)
Q Consensus 282 ---~~~~~~~~~--~~~~v~~~~--~--~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~ 351 (536)
+++.+..+. |...|.++. | +++++++++ |+.|++||+++++........+...+++++|+|++.+|++|+
T Consensus 110 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 110 DSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp ETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEEC
T ss_pred ecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEc
Confidence 445444444 567899988 7 889999888 999999999999987776555677899999999999999999
Q ss_pred CCCcEEEEEcccCcccccccee-eeccC-CCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEe
Q 009373 352 EDGAIHMYEIINDCTEANVLLV-ATWIP-HTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIE 427 (536)
Q Consensus 352 ~dg~i~iwd~~~~~~~~~~~~~-~~~~~-h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 427 (536)
.||.|++||++++ ..+ ..+.+ |.++|++++|+| .+|++++ |+.|++||+++.........
T Consensus 190 ~dg~i~iwd~~~~------~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~--------- 253 (343)
T 3lrv_A 190 PDGILDVYNLSSP------DQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPT--------- 253 (343)
T ss_dssp TTSCEEEEESSCT------TSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCC---------
T ss_pred CCCEEEEEECCCC------CCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecc---------
Confidence 9999999999988 344 56677 999999999987 6899998 55999999998543322111
Q ss_pred eCCCeeeeccccc----cEEEEEecCCEEEEecC-CCeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhhcccccc---
Q 009373 428 VEPPQRMLHGFEC----NLLSVDIGADRIVCGGE-EGIVRIWNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSS--- 499 (536)
Q Consensus 428 ~~~~~~~~~~~~~----~v~~~~~~~~~l~sg~~-Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 499 (536)
+..|.. ...++++++.+|++++. |+.|++|++..+...... .....+.|+|
T Consensus 254 -------~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~--------------~~~~~~~~~~~~~ 312 (343)
T 3lrv_A 254 -------YTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK--------------DEESALCLQSDTA 312 (343)
T ss_dssp -------CBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE--------------EEEEECCC----C
T ss_pred -------cccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe--------------cCceeEecCcccc
Confidence 001111 24566667779999888 999999999765422111 2234677888
Q ss_pred CCCCcceeEeecccC
Q 009373 500 KGGRTDQCSVAAKKN 514 (536)
Q Consensus 500 ~g~~~~~~~~~~~~~ 514 (536)
++..+++++.+....
T Consensus 313 ~~~~l~~~~~d~~~~ 327 (343)
T 3lrv_A 313 DFTDMDVVCGDGGIA 327 (343)
T ss_dssp CCCEEEEEEETTEEE
T ss_pred ccceeEEEecCCceE
Confidence 777777776655443
No 114
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.3e-27 Score=231.36 Aligned_cols=285 Identities=11% Similarity=0.135 Sum_probs=190.5
Q ss_pred EEECCCCceeeeeCCCCceEEEE--ecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE
Q 009373 184 MWHLEDGFSIASSKPLGCTIRAV--AADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL 261 (536)
Q Consensus 184 iwd~~~~~~~~~~~~~~~~v~~~--~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 261 (536)
||++.+.+.+.....|...|.++ +|++.+|++|+.+| +++|++.++. .......+ .+..+++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~-------------~~~~~~~~--~~~~~~~ 66 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVA-------------HIMSQEMR--HLSKVRM 66 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEE-------------EEEEEECS--CCCEEEE
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcc-------------eeeeeecC--CeEEEEE
Confidence 56677777777777777776555 58999999998776 7899986542 12222112 3444554
Q ss_pred --eCCEE-EEEecCCeEEEEeCCCceEeEeeeccccEEEEeecCCEEEEecCCcEEEEeCCCC-cEEEEEccccccceEE
Q 009373 262 --DLTRI-YSGSWDMTVRVWDRALLKCLKVLRHSDWVYGLAPHDTTVASTSGSDVYIWDTNSG-CLLTVVNGAHVGNTKS 337 (536)
Q Consensus 262 --~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~i~~ 337 (536)
+++.+ ++++.|++|++||..+++.+..+.+...|.++..+...++++.++.|++||+.++ +.+..+.. ....
T Consensus 67 ~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~----~~~~ 142 (355)
T 3vu4_A 67 LHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR----FGGV 142 (355)
T ss_dssp CTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE----EEEE
T ss_pred cCCCCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc----CCce
Confidence 56665 6788899999999999999999998889999998888888888999999999998 66655532 3445
Q ss_pred EEEeCCCCEEEE--EcCCCcEEEEEcccCccc---------cccce-eeeccCCCCCeEEEEEcC--CeEEEEeCCCc-E
Q 009373 338 LARSHTGDFLFT--GGEDGAIHMYEIINDCTE---------ANVLL-VATWIPHTGPVNSLAFEF--PWLVSAAGDGK-L 402 (536)
Q Consensus 338 l~~~~~~~~l~t--g~~dg~i~iwd~~~~~~~---------~~~~~-~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~-i 402 (536)
+++++ .++++ |+.||.|++||+.++... ....+ +..+.+|.+.|++++|+| .+|++|+.||+ |
T Consensus 143 ~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v 220 (355)
T 3vu4_A 143 CEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTII 220 (355)
T ss_dssp EEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEE
T ss_pred EEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEE
Confidence 56676 56665 689999999999875310 01112 677899999999999987 79999999998 9
Q ss_pred EEEECCcccccCCCCCCCceeeEEeeCCCeeeec-c-ccccEEEEEecCC--EEEEecCCCeEEEEeCCchhhHHHHHHh
Q 009373 403 SLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLH-G-FECNLLSVDIGAD--RIVCGGEEGIVRIWNFSQAFEIERRARA 478 (536)
Q Consensus 403 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~--~l~sg~~Dg~i~vW~~~~~~~~~~~~~~ 478 (536)
++||++++. ....+. + |...|.+++++++ +|++|+.||+|++||+..+...... .
T Consensus 221 ~iwd~~~~~-------------------~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~--~ 279 (355)
T 3vu4_A 221 RVFKTEDGV-------------------LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRH--A 279 (355)
T ss_dssp EEEETTTCC-------------------EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSE--E
T ss_pred EEEECCCCc-------------------EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccc--c
Confidence 999998742 223344 4 7788888887664 9999999999999999875321110 0
Q ss_pred hhcc---------------cchhHHHhhhhccccccCCCCcceeEeec
Q 009373 479 LRGI---------------RLENRMRRRKLQTEMSSKGGRTDQCSVAA 511 (536)
Q Consensus 479 ~~~~---------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 511 (536)
+... ............++|+++|..+++.+.+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg 327 (355)
T 3vu4_A 280 LKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTR 327 (355)
T ss_dssp TTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTT
T ss_pred ccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCC
Confidence 0000 00000111125678999999888865433
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-27 Score=253.69 Aligned_cols=247 Identities=18% Similarity=0.194 Sum_probs=194.4
Q ss_pred eeeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--e--CCEEE
Q 009373 194 ASSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--D--LTRIY 267 (536)
Q Consensus 194 ~~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~--~~~l~ 267 (536)
..+.+|...|.++. |++++|++|+.||+|++||+..+. ......+.+|.++|.+++| + ++.|+
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~-----------~~~~~~l~~h~~~V~~l~~s~~~~~~~l~ 71 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-----------HKLIDTLTGHEGPVWRVDWAHPKFGTILA 71 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE-----------EEEEEEECCCSSCEEEEEECCTTSCSEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC-----------CccceeccCCcCceEEEEecCCCCCCEEE
Confidence 45678999998876 889999999999999999986431 3356678899999999999 3 78999
Q ss_pred EEecCCeEEEEeCCCce--EeEeee-ccccEEEEe--ec--CCEEEEec-CCcEEEEeCCCCc--EEEEEccccccceEE
Q 009373 268 SGSWDMTVRVWDRALLK--CLKVLR-HSDWVYGLA--PH--DTTVASTS-GSDVYIWDTNSGC--LLTVVNGAHVGNTKS 337 (536)
Q Consensus 268 s~s~dg~i~iwd~~~~~--~~~~~~-~~~~v~~~~--~~--~~~l~~~~-d~~i~i~d~~~~~--~~~~~~~~~~~~i~~ 337 (536)
+|+.||+|++||+.+++ ....+. |...|.++. |+ +..+++++ |+.|++||++++. ....+ .+|...|.+
T Consensus 72 s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~-~~~~~~v~~ 150 (753)
T 3jro_A 72 SCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGVNS 150 (753)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE-ECCSSCEEE
T ss_pred EEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe-ecCCCceEE
Confidence 99999999999999886 444444 889999988 66 88888888 8999999999873 23333 369999999
Q ss_pred EEEeC-------------CCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC-----CeEEEEeCC
Q 009373 338 LARSH-------------TGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF-----PWLVSAAGD 399 (536)
Q Consensus 338 l~~~~-------------~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~s~d 399 (536)
++|+| ++.+|++|+.||.|++||++++.. .......+.+|..+|++++|+| .+|++|+.|
T Consensus 151 l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~--~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D 228 (753)
T 3jro_A 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ--TYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 228 (753)
T ss_dssp EEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTT--EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESS
T ss_pred EEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcc--cceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecC
Confidence 99999 589999999999999999987732 2245667889999999999985 489999999
Q ss_pred CcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEe--cCCEEEEecCCCeEEEEeCCc
Q 009373 400 GKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDI--GADRIVCGGEEGIVRIWNFSQ 468 (536)
Q Consensus 400 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~sg~~Dg~i~vW~~~~ 468 (536)
|.|++||+++...... .......+|...+.++.+ ++.++++|+.||.|++|++.+
T Consensus 229 g~I~iwd~~~~~~~~~--------------~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 229 RTCIIWTQDNEQGPWK--------------KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SCEEEEEESSSSSCCB--------------CCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CEEEEecCCCCCCcce--------------eEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 9999999987532111 011122345555655554 556999999999999999984
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.7e-26 Score=230.24 Aligned_cols=275 Identities=13% Similarity=0.119 Sum_probs=212.1
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceee-----eeCCCCceEEEEe--cCCCEEEEEeCCCcEE
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIA-----SSKPLGCTIRAVA--ADKKLLVAGGTDGFIH 223 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~-----~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~ 223 (536)
+..+..+. .+.+++|+|++.++++++.|+.|++||+.+++... .+.+|...+.++. +++.++++++.|+.|+
T Consensus 116 ~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~ 194 (433)
T 3bws_A 116 ISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVH 194 (433)
T ss_dssp EEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEE
T ss_pred EEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEE
Confidence 44555554 45699999988888888899999999999998877 3446777776554 7899999999999999
Q ss_pred EEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEE-EEecCCeEEEEeCCCceEeEeeeccccEEEEe-
Q 009373 224 CWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIY-SGSWDMTVRVWDRALLKCLKVLRHSDWVYGLA- 299 (536)
Q Consensus 224 vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~- 299 (536)
+||+.++. ....+..|...+.+++| +++.++ +++.|+.|++||+.+++....+.....+.++.
T Consensus 195 ~~d~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 261 (433)
T 3bws_A 195 VFDLKTLA-------------YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLL 261 (433)
T ss_dssp EEETTTCC-------------EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEE
T ss_pred EEECCCce-------------EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEE
Confidence 99997653 45566688999999999 556664 55589999999999999988887666677776
Q ss_pred -ecCCEEEEec---------CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCE-EEEEcCCCcEEEEEcccCcccc
Q 009373 300 -PHDTTVASTS---------GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDF-LFTGGEDGAIHMYEIINDCTEA 368 (536)
Q Consensus 300 -~~~~~l~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-l~tg~~dg~i~iwd~~~~~~~~ 368 (536)
|+++.+++++ |+.|++||+.+++.+..+ .|...+.+++|+|+++. +++++.|+.|++||+.++
T Consensus 262 ~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~---- 335 (433)
T 3bws_A 262 SKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI--GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK---- 335 (433)
T ss_dssp CTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE--EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT----
T ss_pred cCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec--cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC----
Confidence 7888887766 578999999999888776 37778999999999975 566789999999999877
Q ss_pred ccceeeeccCCCCCeEEEEEcC--CeEEEEeC---------------CCcEEEEECCcccccCCCCCCCceeeEEeeCCC
Q 009373 369 NVLLVATWIPHTGPVNSLAFEF--PWLVSAAG---------------DGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPP 431 (536)
Q Consensus 369 ~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~---------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (536)
..+..+ .+...+.+++|+| .+|++++. ||.|++||+.++....
T Consensus 336 --~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~----------------- 395 (433)
T 3bws_A 336 --KVQKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE----------------- 395 (433)
T ss_dssp --EEEEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE-----------------
T ss_pred --cEEEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE-----------------
Confidence 344444 3677899999986 57887776 5799999998742221
Q ss_pred eeeeccccccEEEEE--ecCCEEEEec-CCCeEEEEeCCc
Q 009373 432 QRMLHGFECNLLSVD--IGADRIVCGG-EEGIVRIWNFSQ 468 (536)
Q Consensus 432 ~~~~~~~~~~v~~~~--~~~~~l~sg~-~Dg~i~vW~~~~ 468 (536)
.+.+ ...+.++. +++++|++++ .|+.|++|+++.
T Consensus 396 --~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 396 --FWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp --EEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred --EecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 1111 12344454 4556777665 599999999863
No 117
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=2e-26 Score=213.13 Aligned_cols=271 Identities=13% Similarity=0.073 Sum_probs=179.1
Q ss_pred EEEEEEecCCC---EEEEEeCCCcEEEEECCCC---ceeeeeCCCCceEEEEecCC---CEEEEEeCCCcEE-EEEcccC
Q 009373 161 VLTVFVLASAK---LLFTSGYDSIVRMWHLEDG---FSIASSKPLGCTIRAVAADK---KLLVAGGTDGFIH-CWRAVEV 230 (536)
Q Consensus 161 V~~v~~~~~~~---~l~sgs~dg~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~~---~~l~sg~~dg~i~-vwd~~~~ 230 (536)
|.++.|-.-+- .++++++ .+|++|+..++ +.+.+++.|..+|..+.|-+ +++.++-.+=.+. ++.+.-.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 55666654433 5667764 68999999999 88999999999999887433 2333222221111 1111000
Q ss_pred ccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEe---cCCeEEEEeC-CCceEeEeee-cccc--EEEEee---
Q 009373 231 LPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGS---WDMTVRVWDR-ALLKCLKVLR-HSDW--VYGLAP--- 300 (536)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s---~dg~i~iwd~-~~~~~~~~~~-~~~~--v~~~~~--- 300 (536)
... ..........+|...|.++ ....++..+ .|+.|++|++ .+++.+..+. |... +.++++
T Consensus 121 ------pd~-~~~~~~l~s~g~~~~v~~l--~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g 191 (356)
T 2w18_A 121 ------SDD-ESEKQVLLKSGNIKAVLGL--TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQG 191 (356)
T ss_dssp ------------CCEEEEEEEEEEEEEEE--TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEET
T ss_pred ------CCc-cccccEEEeCCCeEEEEec--CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCC
Confidence 000 0001111123444444443 445555554 4999999999 4577776655 5544 455566
Q ss_pred cCCEEEEec-CCcEEEEeCCCCcEEEEEcccc--ccceEEEEEeCCCCEE------------EEEcCCCcEEEEEcccCc
Q 009373 301 HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAH--VGNTKSLARSHTGDFL------------FTGGEDGAIHMYEIINDC 365 (536)
Q Consensus 301 ~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~--~~~i~~l~~~~~~~~l------------~tg~~dg~i~iwd~~~~~ 365 (536)
++.+|++++ |++|+|||+.+++.+.++..+| ...+.+++|+|+|.++ ++|+.|++|++||..++
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg- 270 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT- 270 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT-
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC-
Confidence 679999988 9999999999999999996432 3467888999999876 56888999999999888
Q ss_pred cccccceeeec-----cCCCCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccc
Q 009373 366 TEANVLLVATW-----IPHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFEC 440 (536)
Q Consensus 366 ~~~~~~~~~~~-----~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (536)
..+..+ .+|...+.+..+++.++++++.|++|+|||+.++ .....+.+|..
T Consensus 271 -----k~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tG-------------------k~l~tL~gH~~ 326 (356)
T 2w18_A 271 -----LSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLG-------------------QCTALLPPVSD 326 (356)
T ss_dssp -----EEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTC-------------------SEEEEECCC--
T ss_pred -----EEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCC-------------------cEEEEecCCCC
Confidence 333332 4777777777777889999999999999999884 33345566654
Q ss_pred cE---EEEEecCCEEEEecCCCeEEEEeC
Q 009373 441 NL---LSVDIGADRIVCGGEEGIVRIWNF 466 (536)
Q Consensus 441 ~v---~~~~~~~~~l~sg~~Dg~i~vW~~ 466 (536)
.+ .++++++.+|+||+.|++|+|||+
T Consensus 327 ~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 327 QHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 33 345566669999999999999996
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=4.3e-25 Score=216.95 Aligned_cols=320 Identities=13% Similarity=0.061 Sum_probs=225.5
Q ss_pred CccceeeeeCccccEEEEEEecCCCEE-EEEeCCCcEEEEECCCCceeeeeCCCC-ceEEEEecCCCEEE-EEeCCCcEE
Q 009373 147 GRYSIDVLYGHTEAVLTVFVLASAKLL-FTSGYDSIVRMWHLEDGFSIASSKPLG-CTIRAVAADKKLLV-AGGTDGFIH 223 (536)
Q Consensus 147 ~~~~~~~l~~h~~~V~~v~~~~~~~~l-~sgs~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~l~-sg~~dg~i~ 223 (536)
....+..+.+|.. +.+++|+|+++++ ++++.|++|++||+.+++.+..+..+. ....+++|+++.|+ +++.++.|+
T Consensus 21 ~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~ 99 (391)
T 1l0q_A 21 SNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLS 99 (391)
T ss_dssp TTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEE
Confidence 3345667777754 8999999999976 677799999999999999888876554 23345668898775 555679999
Q ss_pred EEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEE-EEEecCCeEEEEeCCCceEeEeeeccccEEEEe-
Q 009373 224 CWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRI-YSGSWDMTVRVWDRALLKCLKVLRHSDWVYGLA- 299 (536)
Q Consensus 224 vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~- 299 (536)
+||+.++. ....+. +...+.+++| +++.+ ++++.|+.|++||+.+++....+.....+.++.
T Consensus 100 v~d~~~~~-------------~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 165 (391)
T 1l0q_A 100 VIDTTSNT-------------VAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAV 165 (391)
T ss_dssp EEETTTTE-------------EEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEE
T ss_pred EEECCCCe-------------EEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEE
Confidence 99997753 233333 4456899999 56666 788889999999999999988888556666665
Q ss_pred -ecCCEE-EEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEc---CCCcEEEEEcccCcccccccee
Q 009373 300 -PHDTTV-ASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGG---EDGAIHMYEIINDCTEANVLLV 373 (536)
Q Consensus 300 -~~~~~l-~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~---~dg~i~iwd~~~~~~~~~~~~~ 373 (536)
++++.+ +++. ++.|++||+++++....+. +...+.+++|+|++++|++++ .++.|++||+.++ ..+
T Consensus 166 ~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~------~~~ 237 (391)
T 1l0q_A 166 TPDGTKVYVANFDSMSISVIDTVTNSVIDTVK--VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN------KIT 237 (391)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT------EEE
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe--cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC------eEE
Confidence 788877 4555 7899999999998888774 667899999999999999888 6899999999887 455
Q ss_pred eeccCCCCCeEEEEEcC--CeE-EEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeee-ccccccEEEEEec-
Q 009373 374 ATWIPHTGPVNSLAFEF--PWL-VSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRML-HGFECNLLSVDIG- 448 (536)
Q Consensus 374 ~~~~~h~~~v~~l~~~~--~~l-~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~- 448 (536)
..+..|. .+.+++|+| .+| ++++.|+.|++||+.++........+..... ........ .++...+..+..+
T Consensus 238 ~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~fs~~~ 313 (391)
T 1l0q_A 238 ARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYA---SGQFIGSIPVQPVYPSADFKSNI 313 (391)
T ss_dssp EEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEC---CSSCEEECSSCCCCCBCCEEESC
T ss_pred EEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCc---cceeeeccccccccccccccccc
Confidence 5565554 578999986 456 6778899999999987544322211111000 00000000 0111112222221
Q ss_pred -------C--CEEEEecCCCeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhhccccccCCCCcceeEe
Q 009373 449 -------A--DRIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQCSV 509 (536)
Q Consensus 449 -------~--~~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 509 (536)
. -.+...+.|..+++|++.++.... .......++++|...++..+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~~----------------~~~~~~~~~~~g~y~~~~~~ 367 (391)
T 1l0q_A 314 TSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSK----------------KQNPTHTYSETGIYTVRLTV 367 (391)
T ss_dssp CSSEEETTCCEEEEECCBSCSEEEEECSSSCEEC----------------SSSCEECCSSCEEEEEEEEE
T ss_pred ccccccccceEEEEeCCCCceEEEEECCCCcccC----------------cCCCeEEeCCCceEEEEEEE
Confidence 1 256777889999999998875310 11234678888888877554
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=7.1e-27 Score=229.50 Aligned_cols=256 Identities=11% Similarity=0.081 Sum_probs=164.1
Q ss_pred eeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCcee-----eeeCCCCceEEEEe--c--------CCCEEEEEe
Q 009373 153 VLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSI-----ASSKPLGCTIRAVA--A--------DKKLLVAGG 217 (536)
Q Consensus 153 ~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~-----~~~~~~~~~v~~~~--~--------~~~~l~sg~ 217 (536)
....|...+....+.+++.+|++|+.|++|+|||+.++... ..+.+|...|.++. | ++++|++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 84 SENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp ECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred cccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence 34456666666667778889999999999999999988643 34688999998776 4 688999999
Q ss_pred CCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeC---CEEEEEecCCeEEEEeCCCceEeEeee----
Q 009373 218 TDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDL---TRIYSGSWDMTVRVWDRALLKCLKVLR---- 290 (536)
Q Consensus 218 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~---- 290 (536)
.|++|++||+.++. ....+.+|.++|.+++|.+ .+|++|+.||+|++||+.+++......
T Consensus 164 ~D~tv~~Wd~~~~~-------------~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~ 230 (393)
T 4gq1_A 164 DDCTLIIWRLTDEG-------------PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTEL 230 (393)
T ss_dssp TTSEEEEEEEETTE-------------EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------
T ss_pred CCCeEEEEECCCCc-------------eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCC
Confidence 99999999996642 5566778999999999943 479999999999999999887665543
Q ss_pred -ccccEEEEeecCCEEEEecCCcEEEEeCCCCcEEEEEccccccceEEEEEe-CCCCEEEEEcCCCcEEEEEcccCcccc
Q 009373 291 -HSDWVYGLAPHDTTVASTSGSDVYIWDTNSGCLLTVVNGAHVGNTKSLARS-HTGDFLFTGGEDGAIHMYEIINDCTEA 368 (536)
Q Consensus 291 -~~~~v~~~~~~~~~l~~~~d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~l~tg~~dg~i~iwd~~~~~~~~ 368 (536)
+...+........ ..... ..+|...+.++.|+ |++..|++++.|+++++||+....
T Consensus 231 ~~~~~~~s~~~~~~------------------~~~~~-~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~--- 288 (393)
T 4gq1_A 231 VKNPWLLTLNTLPL------------------VNTCH-SSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN--- 288 (393)
T ss_dssp CSCCCSEEEESGGG------------------C-------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------
T ss_pred cccceEEecccccc------------------eeeee-cccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC---
Confidence 1111111111100 00011 12588889999987 799999999999999999998763
Q ss_pred ccceeeeccCCCCCeEEE------------------EEcC----CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEE
Q 009373 369 NVLLVATWIPHTGPVNSL------------------AFEF----PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVI 426 (536)
Q Consensus 369 ~~~~~~~~~~h~~~v~~l------------------~~~~----~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 426 (536)
....+..|...+..+ .|.+ .++++|+.||.|++||+.++.
T Consensus 289 ---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~--------------- 350 (393)
T 4gq1_A 289 ---DYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKD--------------- 350 (393)
T ss_dssp ------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTT---------------
T ss_pred ---CCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCc---------------
Confidence 222333333333222 2222 267788889999999998742
Q ss_pred eeCCCeeeeccccccEEEEEecCC--EEEEecCCCeEEEEeC
Q 009373 427 EVEPPQRMLHGFECNLLSVDIGAD--RIVCGGEEGIVRIWNF 466 (536)
Q Consensus 427 ~~~~~~~~~~~~~~~v~~~~~~~~--~l~sg~~Dg~i~vW~~ 466 (536)
......+|...|.+++|+++ +||+++.|| +.+|++
T Consensus 351 ----~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 351 ----SNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp ----CCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred ----EEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 22334556667777776655 999998776 555554
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.7e-25 Score=224.09 Aligned_cols=245 Identities=13% Similarity=0.085 Sum_probs=193.4
Q ss_pred eeeeCccccEEEEEEecCCCEE-EEEeCCCcEEEEECC--CCceeeeeC--CCCceEEE--EecCCCEEEEEeCCCcEEE
Q 009373 152 DVLYGHTEAVLTVFVLASAKLL-FTSGYDSIVRMWHLE--DGFSIASSK--PLGCTIRA--VAADKKLLVAGGTDGFIHC 224 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~~~~l-~sgs~dg~v~iwd~~--~~~~~~~~~--~~~~~v~~--~~~~~~~l~sg~~dg~i~v 224 (536)
....+|.+.|++++|+|++++| ++|+.||.|++||+. +++.+..+. .+...+.+ ++|++.+|++|+.+|.|++
T Consensus 96 ~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 96 LGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYS 175 (450)
T ss_dssp ----CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEE
Confidence 3556899999999999999996 899999999999999 888887775 45555554 5589999999999999999
Q ss_pred EEcccCccceecccCcccccceEEeeCCccCEEEEEE--e---CCEEEEEecCCeEEEEeCCCceEeEeee--ccccEEE
Q 009373 225 WRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--D---LTRIYSGSWDMTVRVWDRALLKCLKVLR--HSDWVYG 297 (536)
Q Consensus 225 wd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~v~~ 297 (536)
|++.++... ......+.+|.+.|.+++| + +.+|++|+.|++|++||+.+++.+..+. |...|.+
T Consensus 176 ~~~~~~~~~---------~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~ 246 (450)
T 2vdu_B 176 IDINSIPEE---------KFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSS 246 (450)
T ss_dssp EETTSCCCS---------SCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEE
T ss_pred EecCCcccc---------cccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEE
Confidence 998765310 0023356789999999999 5 5599999999999999999998877643 8889998
Q ss_pred Eee-cCCEEEEec-CCcEEEEeCCCCcEEEEEccc------------------------cccceEEEEEeCCCCEEEEEc
Q 009373 298 LAP-HDTTVASTS-GSDVYIWDTNSGCLLTVVNGA------------------------HVGNTKSLARSHTGDFLFTGG 351 (536)
Q Consensus 298 ~~~-~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~------------------------~~~~i~~l~~~~~~~~l~tg~ 351 (536)
++. ++.+|++++ |+.|++||+.+++.+..+... ....+.+++|+|++++|++++
T Consensus 247 ~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 247 ICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp EEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred EEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 875 688999988 899999999999988877521 235689999999999999998
Q ss_pred -CCCcEEEEEc--ccCccccccceeeeccCCCCCeEEEEEcCC-eEEEEeC-------CCcEEEEECCc
Q 009373 352 -EDGAIHMYEI--INDCTEANVLLVATWIPHTGPVNSLAFEFP-WLVSAAG-------DGKLSLIDVRK 409 (536)
Q Consensus 352 -~dg~i~iwd~--~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~l~s~s~-------dg~i~vwd~~~ 409 (536)
.|+.|++|++ ... ..+..+..+..| +.|.+++|+|+ .+++.+. +..|.+|.+..
T Consensus 327 ~~d~~i~iw~~~~~~~---~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 327 EATKCIIILEMSEKQK---GDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp TTCSEEEEEEECSSST---TCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred CCCCeEEEEEeccCCC---CceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 8999999999 333 223456667777 89999999985 4444332 44578887653
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=7.2e-25 Score=215.31 Aligned_cols=261 Identities=11% Similarity=0.058 Sum_probs=199.4
Q ss_pred CEEEEEeCCCcEEEEECCCCceeeeeCCCCc-eEEEEecCCCEE-EEEeCCCcEEEEEcccCccceecccCcccccceEE
Q 009373 171 KLLFTSGYDSIVRMWHLEDGFSIASSKPLGC-TIRAVAADKKLL-VAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFR 248 (536)
Q Consensus 171 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 248 (536)
.++++++.|+.|++||+.+++.+..+..|.. ...+++++++.+ ++++.|+.|++||+.++. ....
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~-------------~~~~ 69 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN-------------VIAT 69 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE-------------EEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCe-------------EEEE
Confidence 4688999999999999999999888876654 334566899876 677799999999997753 3334
Q ss_pred eeCCccCEEEEEE--eCCEEE-EEecCCeEEEEeCCCceEeEeeeccccEEEEe--ecCCEE-EEec-CCcEEEEeCCCC
Q 009373 249 LWEHEGPITSLAL--DLTRIY-SGSWDMTVRVWDRALLKCLKVLRHSDWVYGLA--PHDTTV-ASTS-GSDVYIWDTNSG 321 (536)
Q Consensus 249 ~~~h~~~v~~l~~--~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~--~~~~~l-~~~~-d~~i~i~d~~~~ 321 (536)
+..+. .+.+++| ++++++ +++.|+.|++||+.+++.+..+.+...+.++. ++++.+ ++++ ++.|++||+.++
T Consensus 70 ~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 148 (391)
T 1l0q_A 70 VPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK 148 (391)
T ss_dssp EECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred EECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 44343 8999999 567665 55577999999999999988888666777776 788876 5666 899999999999
Q ss_pred cEEEEEccccccceEEEEEeCCCCEE-EEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEe-
Q 009373 322 CLLTVVNGAHVGNTKSLARSHTGDFL-FTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAA- 397 (536)
Q Consensus 322 ~~~~~~~~~~~~~i~~l~~~~~~~~l-~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s- 397 (536)
+.+..+. ....+.+++|+|+++++ ++++.|+.|++||++++ .....+ .+...+.+++|+| .+|++++
T Consensus 149 ~~~~~~~--~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~------~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 149 AVINTVS--VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN------SVIDTV-KVEAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp EEEEEEE--CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT------EEEEEE-ECSSEEEEEEECTTSSEEEEEEE
T ss_pred cEEEEEe--cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC------eEEEEE-ecCCCccceEECCCCCEEEEEec
Confidence 9888875 34567999999999877 67788999999999887 344443 3556889999986 5788777
Q ss_pred --CCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEE--ecCCEE-EEecCCCeEEEEeCCchhhH
Q 009373 398 --GDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVD--IGADRI-VCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 398 --~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~l-~sg~~Dg~i~vW~~~~~~~~ 472 (536)
.++.|++||+++.... ..+..+. .+.++. ++++++ ++++.|+.|++||+.+++.+
T Consensus 220 ~~~~~~v~~~d~~~~~~~-------------------~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 220 DKYFNTVSMIDTGTNKIT-------------------ARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTIT 279 (391)
T ss_dssp CSSCCEEEEEETTTTEEE-------------------EEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CcCCCcEEEEECCCCeEE-------------------EEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEE
Confidence 6899999999874221 1122222 234444 455555 78899999999999987665
Q ss_pred HH
Q 009373 473 ER 474 (536)
Q Consensus 473 ~~ 474 (536)
..
T Consensus 280 ~~ 281 (391)
T 1l0q_A 280 AT 281 (391)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=5.6e-27 Score=230.23 Aligned_cols=248 Identities=10% Similarity=0.029 Sum_probs=159.3
Q ss_pred CCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEe-----ee-ccccEEEEe--e--------cCCEEEEec-CC
Q 009373 251 EHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKV-----LR-HSDWVYGLA--P--------HDTTVASTS-GS 311 (536)
Q Consensus 251 ~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~-----~~-~~~~v~~~~--~--------~~~~l~~~~-d~ 311 (536)
.|...+....+ ++..+++++.|++|++||..+++.... +. |.+.|.+++ | ++++|++++ |+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 34444433333 667899999999999999998866432 22 899999988 3 678999998 89
Q ss_pred cEEEEeCCCCcEEEEEccccccceEEEEEeCCCC-EEEEEcCCCcEEEEEcccCcccccc-------------------c
Q 009373 312 DVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGD-FLFTGGEDGAIHMYEIINDCTEANV-------------------L 371 (536)
Q Consensus 312 ~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~tg~~dg~i~iwd~~~~~~~~~~-------------------~ 371 (536)
+|++||++++.++..+. +|...+.+++|+|++. +|++|+.||+|++||++++...... .
T Consensus 167 tv~~Wd~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~ 245 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGY-PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLV 245 (393)
T ss_dssp EEEEEEEETTEEEEEEE-ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC
T ss_pred eEEEEECCCCceeeeec-CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccce
Confidence 99999999888777765 5889999999999874 8999999999999999876432111 1
Q ss_pred eeeeccCCCCCeEEEEEc---CCeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEE-EEEe
Q 009373 372 LVATWIPHTGPVNSLAFE---FPWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLL-SVDI 447 (536)
Q Consensus 372 ~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~ 447 (536)
......+|...|.++.|. +..|++++.|+++++||+....................+.+.......+...+. .+.+
T Consensus 246 ~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (393)
T 4gq1_A 246 NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHP 325 (393)
T ss_dssp ------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECS
T ss_pred eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEcc
Confidence 112235788899999995 379999999999999999875443322211111111111111222222221111 1222
Q ss_pred c--CCEEEEecCCCeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhhccccccCCCCcceeEe
Q 009373 448 G--ADRIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQCSV 509 (536)
Q Consensus 448 ~--~~~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 509 (536)
. +.++++|+.||.|++||+.++....... .....+.+++|+|||+.||+++-
T Consensus 326 ~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~----------~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 326 RYMDYFATAHSQHGLIQLINTYEKDSNSIPI----------QLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp SCTTEEEEEETTTTEEEEEETTCTTCCEEEE----------ECSSCEEEEEECTTSSEEEEEES
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEec----------CCCCcEEEEEEcCCCCEEEEEeC
Confidence 2 2278899999999999999886543221 12235678999999999998864
No 123
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=2e-26 Score=222.08 Aligned_cols=286 Identities=13% Similarity=0.110 Sum_probs=194.6
Q ss_pred eeCCCCceEEEEe--cCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEe----CCEEEE
Q 009373 195 SSKPLGCTIRAVA--ADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD----LTRIYS 268 (536)
Q Consensus 195 ~~~~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~~l~s 268 (536)
.+.+|...|.++. +++++|++|+.||.|++||+.++. ........+.+|...|.+++|. +++|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---------~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s 76 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDT---------SNWELSDSWRAHDSSIVAIDWASPEYGRIIAS 76 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSS---------CCEEEEEEEECCSSCEEEEEECCGGGCSEEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCC---------CcceecceeccCCCcEEEEEEcCCCCCCEEEE
Confidence 4578888887776 899999999999999999997653 1123556678999999999992 789999
Q ss_pred EecCCeEEEEeCCCc---------eEeEeee-ccccEEEEe--ec--CCEEEEec-CCcEEEEeCCCCcEEEEEc-----
Q 009373 269 GSWDMTVRVWDRALL---------KCLKVLR-HSDWVYGLA--PH--DTTVASTS-GSDVYIWDTNSGCLLTVVN----- 328 (536)
Q Consensus 269 ~s~dg~i~iwd~~~~---------~~~~~~~-~~~~v~~~~--~~--~~~l~~~~-d~~i~i~d~~~~~~~~~~~----- 328 (536)
|+.||+|++||+.++ +....+. |...|.++. ++ +.++++++ |+.|++||+++++.+..+.
T Consensus 77 ~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~ 156 (351)
T 3f3f_A 77 ASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEM 156 (351)
T ss_dssp EETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEE
T ss_pred EcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccc
Confidence 999999999999886 4455555 889999988 66 88888888 8999999999876543321
Q ss_pred -------cccccceEEEEEeCC---CCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCC------e
Q 009373 329 -------GAHVGNTKSLARSHT---GDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFP------W 392 (536)
Q Consensus 329 -------~~~~~~i~~l~~~~~---~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~------~ 392 (536)
.+|...+.+++|+|+ +.++++++.|+.+.+|+...+. ...+..+.+|...|++++|+|. +
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~h~~~i~~~~~~p~~~~~~~~ 232 (351)
T 3f3f_A 157 KVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK----LHVAAKLPGHKSLIRSISWAPSIGRWYQL 232 (351)
T ss_dssp ESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC----EEEEEECCCCCSCEEEEEECCCSSCSSEE
T ss_pred cccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc----eeeeeecCCCCcceeEEEECCCCCCcceE
Confidence 257789999999997 8999999999999888776652 2347778899999999999864 7
Q ss_pred EEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEEEeCCchhhH
Q 009373 393 LVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 393 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~ 472 (536)
|++++.||.|++||+++............. ...................++.+..+.+|+..+...+
T Consensus 233 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (351)
T 3f3f_A 233 IATGCKDGRIRIFKITEKLSPLASEESLTN-------------SNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELL 299 (351)
T ss_dssp EEEEETTSCEEEEEEEECC----------------------------------------------------CCSEEEEEE
T ss_pred EEEEcCCCeEEEEeCCCCcCccccCCcccc-------------eeccCCCcccccccccccccccceeeeecccccccEE
Confidence 999999999999999875332211100000 0000000011111122233444555566655544333
Q ss_pred HHHHHhhhcccchhHHHhhhhccccccCCCCcceeEeecccCCc
Q 009373 473 ERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQCSVAAKKNPM 516 (536)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 516 (536)
... ......+.+++|+|+|..+++++.+.....+
T Consensus 300 ~~~----------~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw 333 (351)
T 3f3f_A 300 SEH----------DDHNGEVWSVSWNLTGTILSSAGDDGKVRLW 333 (351)
T ss_dssp EEE----------CTTSSCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred EEE----------ecccccEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 221 1123457889999999999998876554433
No 124
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.3e-26 Score=228.16 Aligned_cols=221 Identities=8% Similarity=-0.038 Sum_probs=174.4
Q ss_pred CccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCc-------eEEEEecCCCEEEEEeCCCcEEEEEcc
Q 009373 156 GHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGC-------TIRAVAADKKLLVAGGTDGFIHCWRAV 228 (536)
Q Consensus 156 ~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~-------~v~~~~~~~~~l~sg~~dg~i~vwd~~ 228 (536)
+|.+.|++++|+|+|.+||+++.||+|++||.++ .+..+. |.. ...+++|+|++|++|+.||+|++||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 5689999999999999999999999999999654 555556 543 345556999999999999999999997
Q ss_pred cCccceecccCcccccceEEe----eCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceE---eEeee--ccccEEEEe
Q 009373 229 EVLPHLFDISGSEKQNTQFRL----WEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKC---LKVLR--HSDWVYGLA 299 (536)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~---~~~~~--~~~~v~~~~ 299 (536)
++...- ........+ .+|.+.|.+++|.++-+++++.|++|++||+.++.. ..++. |...|.+++
T Consensus 160 ~~~l~~------~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sva 233 (588)
T 2j04_A 160 KNSENT------PEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLK 233 (588)
T ss_dssp CCTTTC------CCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEE
T ss_pred CCcccc------ccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEE
Confidence 752100 000123444 678899999999443399999999999999988774 24553 778899988
Q ss_pred ecCCEEEEecCCcEEEEeCCCCcEEEEEccccccceEEEEE--eCCCCEEEEEcCCCcEEEEEcccCccccccceeeecc
Q 009373 300 PHDTTVASTSGSDVYIWDTNSGCLLTVVNGAHVGNTKSLAR--SHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWI 377 (536)
Q Consensus 300 ~~~~~l~~~~d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~--~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~ 377 (536)
..+..++++++++|++||+.+++...... +|...++.++| +|++..++++++||+ ++|...
T Consensus 234 Fsg~~LASa~~~tIkLWd~~~~~~~~~~~-gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d--------------- 296 (588)
T 2j04_A 234 IVDYKVVLTCPGYVHKIDLKNYSISSLKT-GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED--------------- 296 (588)
T ss_dssp EETTEEEEECSSEEEEEETTTTEEEEEEC-SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS---------------
T ss_pred EECCEEEEEeCCeEEEEECCCCeEEEEEc-CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec---------------
Confidence 66899999999999999999887744443 69999999999 999999999999999 999865
Q ss_pred CCCCCeEEEEEcCCeEEEEeCCCcEEEEECCc
Q 009373 378 PHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 378 ~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~ 409 (536)
.++++|+..++++.|+++++|+...
T Consensus 297 -------~~~~spd~~l~a~~d~~v~lW~~~g 321 (588)
T 2j04_A 297 -------ELHVTADNIIAPYLEKKFKKWSTIW 321 (588)
T ss_dssp -------SEEEECCCSSHHHHHHHHHHTTTTT
T ss_pred -------cEEECCCceEEEEcCCEEEEEECCC
Confidence 1446665444444599999998754
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=1.2e-25 Score=207.90 Aligned_cols=180 Identities=11% Similarity=0.093 Sum_probs=135.3
Q ss_pred cCCCEEEEEe--CCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE-----eCCEEEEEecCCeEEEEeC
Q 009373 208 ADKKLLVAGG--TDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL-----DLTRIYSGSWDMTVRVWDR 280 (536)
Q Consensus 208 ~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-----~~~~l~s~s~dg~i~iwd~ 280 (536)
++++++.+++ .|+.|++|++... ......+.+|...+..++| ++..|++|+.|++|+|||+
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~d------------G~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl 210 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAED------------GGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNL 210 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTT------------SCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEET
T ss_pred CCCcEEEecccCCCCcEEEEEECCC------------CceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEEC
Confidence 4455555533 5999999998442 1234455567776666665 4489999999999999999
Q ss_pred CCceEeEeee-cc---ccEEE--EeecCCEE------------EEec-CCcEEEEeCCCCcEEEEE----ccccccceEE
Q 009373 281 ALLKCLKVLR-HS---DWVYG--LAPHDTTV------------ASTS-GSDVYIWDTNSGCLLTVV----NGAHVGNTKS 337 (536)
Q Consensus 281 ~~~~~~~~~~-~~---~~v~~--~~~~~~~l------------~~~~-d~~i~i~d~~~~~~~~~~----~~~~~~~i~~ 337 (536)
.++++++++. |. ..+.+ ++|++.++ ++++ |++|++||..+++.+..+ ..+|...+.+
T Consensus 211 ~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~ls 290 (356)
T 2w18_A 211 KTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLE 290 (356)
T ss_dssp TTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEE
T ss_pred CCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEc
Confidence 9999999986 32 34443 45888876 4455 789999999999987765 3467666554
Q ss_pred EEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeE-EEEEcC--CeEEEEeCCCcEEEEEC
Q 009373 338 LARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVN-SLAFEF--PWLVSAAGDGKLSLIDV 407 (536)
Q Consensus 338 l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~-~l~~~~--~~l~s~s~dg~i~vwd~ 407 (536)
..++ +.++++|+.||+|+|||+.++ +++.++.+|...+. +++|+| .+|++|+.|++|+|||+
T Consensus 291 g~~s--g~~lASgS~DgTIkIWDl~tG------k~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 291 GDVK--DHCAAAILTSGTIAIWDLLLG------QCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEE--TTEEEEEETTSCEEEEETTTC------SEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred cccC--CCEEEEEcCCCcEEEEECCCC------cEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 4444 889999999999999999999 78889999987655 589987 59999999999999996
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=2.7e-23 Score=207.03 Aligned_cols=234 Identities=13% Similarity=0.099 Sum_probs=189.7
Q ss_pred eeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEE--EecCCCEEE-EEeCCCcEEEEEccc
Q 009373 153 VLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRA--VAADKKLLV-AGGTDGFIHCWRAVE 229 (536)
Q Consensus 153 ~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~--~~~~~~~l~-sg~~dg~i~vwd~~~ 229 (536)
.+.+|.+.|.+++|+|++.++++++.|+.|++||+.+++.+..+..|...+.+ ++++++.++ +++.|+.|++||+.+
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~ 243 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT 243 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC
Confidence 56689999999999999999999999999999999999998888877766654 558888775 555899999999976
Q ss_pred CccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEe--------cCCeEEEEeCCCceEeEeeeccccEEEEe
Q 009373 230 VLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGS--------WDMTVRVWDRALLKCLKVLRHSDWVYGLA 299 (536)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s--------~dg~i~iwd~~~~~~~~~~~~~~~v~~~~ 299 (536)
+. ....+. +...+.+++| +++.+++++ .||.|++||+.+++....+.+...+.++.
T Consensus 244 ~~-------------~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~ 309 (433)
T 3bws_A 244 KL-------------EIRKTD-KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIV 309 (433)
T ss_dssp TE-------------EEEECC-CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEE
T ss_pred Cc-------------EEEEec-CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEE
Confidence 53 223333 3445889999 667888888 48899999999999888887777777766
Q ss_pred --ecCCEE-EEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcC---------------CCcEEEEE
Q 009373 300 --PHDTTV-ASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGE---------------DGAIHMYE 360 (536)
Q Consensus 300 --~~~~~l-~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~---------------dg~i~iwd 360 (536)
++++.+ ++++ ++.|++||+.+++.+..+. +...+.+++|+|+|+++++++. ||.|++||
T Consensus 310 ~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d 387 (433)
T 3bws_A 310 SGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP--VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVID 387 (433)
T ss_dssp ECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEE
T ss_pred ECCCCCEEEEEecCCCEEEEEECCCCcEEEEec--CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEE
Confidence 778655 4545 8999999999999888774 7778999999999998888876 57999999
Q ss_pred cccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeC-CCcEEEEECCc
Q 009373 361 IINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAG-DGKLSLIDVRK 409 (536)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~-dg~i~vwd~~~ 409 (536)
+.++ ..+..+.. ...+.+++|+| .+|++++. |+.|++|++..
T Consensus 388 ~~~~------~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 388 TTTD------TVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp TTTT------EEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCCC------cEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 9887 44555544 45789999986 67887775 99999999864
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=5.6e-23 Score=209.19 Aligned_cols=308 Identities=12% Similarity=0.083 Sum_probs=215.5
Q ss_pred EecCCCEEEEEeCCCcEEEEECCCCceeeeeC-CCCceEEEEecCCCEEEEEeCCCcEEEEEc--ccCccceecccCccc
Q 009373 166 VLASAKLLFTSGYDSIVRMWHLEDGFSIASSK-PLGCTIRAVAADKKLLVAGGTDGFIHCWRA--VEVLPHLFDISGSEK 242 (536)
Q Consensus 166 ~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~--~~~~~~~~~~~~~~~ 242 (536)
++|++.++++++.|++|.+||..+++.+.++. ++.....+++|++++|++++.|++|.+||+ .++.
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~----------- 213 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPT----------- 213 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCE-----------
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCc-----------
Confidence 78999999999999999999999999999887 555456667899999999999999999999 5532
Q ss_pred ccceEEeeCCccCEEEEEEe------CCEEEEEe-cCCeEEEEeCCCceEeEeeec------------cccEEEEe--ec
Q 009373 243 QNTQFRLWEHEGPITSLALD------LTRIYSGS-WDMTVRVWDRALLKCLKVLRH------------SDWVYGLA--PH 301 (536)
Q Consensus 243 ~~~~~~~~~h~~~v~~l~~~------~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~------------~~~v~~~~--~~ 301 (536)
....+. +...+..++|+ ++++++++ .+++|.+||..+++++..+.. ...+.++. ++
T Consensus 214 --~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~ 290 (543)
T 1nir_A 214 --KVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE 290 (543)
T ss_dssp --EEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS
T ss_pred --EEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC
Confidence 333444 34567888884 56788877 589999999999999888762 12566665 55
Q ss_pred CCE-EEEec-CCcEEEEeCCCCcEEE--EEccccccceEEEEEeCCCCEEEEE-cCCCcEEEEEcccCccccccceeeec
Q 009373 302 DTT-VASTS-GSDVYIWDTNSGCLLT--VVNGAHVGNTKSLARSHTGDFLFTG-GEDGAIHMYEIINDCTEANVLLVATW 376 (536)
Q Consensus 302 ~~~-l~~~~-d~~i~i~d~~~~~~~~--~~~~~~~~~i~~l~~~~~~~~l~tg-~~dg~i~iwd~~~~~~~~~~~~~~~~ 376 (536)
+.. +++.. ++.|.+||+.+.+.+. .+ .+...+..+.|+|+|++++++ ..+++|.+||+.++ +.+..+
T Consensus 291 ~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i--~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg------~l~~~i 362 (543)
T 1nir_A 291 HPEFIVNVKETGKVLLVNYKDIDNLTVTSI--GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR------RLSALV 362 (543)
T ss_dssp SSEEEEEETTTTEEEEEECTTSSSCEEEEE--ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT------EEEEEE
T ss_pred CCEEEEEECCCCeEEEEEecCCCcceeEEe--ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC------eEEEee
Confidence 554 44444 7999999999876544 33 356678899999999976654 56899999999988 444444
Q ss_pred c----CCCCCeEEEEEcC---CeEEEEe-CCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEE--
Q 009373 377 I----PHTGPVNSLAFEF---PWLVSAA-GDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVD-- 446 (536)
Q Consensus 377 ~----~h~~~v~~l~~~~---~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-- 446 (536)
. +|.+....+ ++| ..++++. .|++|.|||+.+..... .. ......+.+|...+..+.
T Consensus 363 ~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~--~~----------~~~v~~l~~~g~~~~~v~~~ 429 (543)
T 1nir_A 363 DVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ--YA----------WKKVAELQGQGGGSLFIKTH 429 (543)
T ss_dssp ECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTT--TB----------TSEEEEEECSCSCCCCEECC
T ss_pred ccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCch--hc----------CeEEEEEEcCCCCceEEEcC
Confidence 3 365544444 343 3566665 58999999998621110 00 122334555554444444
Q ss_pred ecCCEEEEec-------CCCeEEEEeCCchhhHHHHH-H-hhhcccchhHHHhhhhccccccCCCCcceeEeec
Q 009373 447 IGADRIVCGG-------EEGIVRIWNFSQAFEIERRA-R-ALRGIRLENRMRRRKLQTEMSSKGGRTDQCSVAA 511 (536)
Q Consensus 447 ~~~~~l~sg~-------~Dg~i~vW~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 511 (536)
+++++|++++ .+++|.+||+.+++...+.. . ...++. ...++..+++|+|+|..+.+..+..
T Consensus 430 pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~g~~~~~s~~~~ 500 (543)
T 1nir_A 430 PKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLG---EGAKRVVQPEYNKRGDEVWFSVWNG 500 (543)
T ss_dssp TTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCC---SSCCEEEEEEECSSSSEEEEEEECC
T ss_pred CCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccC---CCCCceEeccCCCCCCEEEEEeecC
Confidence 5556888887 27899999999987541110 0 000000 1135677999999999999876643
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=4.4e-22 Score=202.58 Aligned_cols=306 Identities=12% Similarity=0.055 Sum_probs=213.2
Q ss_pred cccCCccceeeee-CccccEEEEEEecCCCEEEEEeCCCcEEEEEC--CCCceeeeeCCCCc-eEEEEec----CCCEEE
Q 009373 143 KTFLGRYSIDVLY-GHTEAVLTVFVLASAKLLFTSGYDSIVRMWHL--EDGFSIASSKPLGC-TIRAVAA----DKKLLV 214 (536)
Q Consensus 143 ~~~~~~~~~~~l~-~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~--~~~~~~~~~~~~~~-~v~~~~~----~~~~l~ 214 (536)
+.......+.++. +|. +.+++|+|+|++|++++.|++|++||+ .+++.+.++..+.. .-.+++| ++++++
T Consensus 164 ~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~ 241 (543)
T 1nir_A 164 VDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTI 241 (543)
T ss_dssp EETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEE
T ss_pred EECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEE
Confidence 3333334567777 444 889999999999999999999999999 88888888765433 3356678 999999
Q ss_pred EEeC-CCcEEEEEcccCccceecccCcccccceEEeeC----------C-ccCEEEEEEe--C-CEEEEEecCCeEEEEe
Q 009373 215 AGGT-DGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWE----------H-EGPITSLALD--L-TRIYSGSWDMTVRVWD 279 (536)
Q Consensus 215 sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~----------h-~~~v~~l~~~--~-~~l~s~s~dg~i~iwd 279 (536)
+++. +++|.+||..+++ ....+.. | ...+.++.+. + ..+++...++.|.+||
T Consensus 242 v~~~~~~~v~v~D~~t~~-------------~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd 308 (543)
T 1nir_A 242 AGAYWPPQFAIMDGETLE-------------PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVN 308 (543)
T ss_dssp EEEEESSEEEEEETTTCC-------------EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred EEEccCCeEEEEeccccc-------------cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEE
Confidence 9885 8999999987754 2222221 2 2368888883 3 4567788899999999
Q ss_pred CCCceEeE--eeeccccEEE--EeecCCEEEEec--CCcEEEEeCCCCcEEEEEccc---cccceEEEEEeCC-CCEEEE
Q 009373 280 RALLKCLK--VLRHSDWVYG--LAPHDTTVASTS--GSDVYIWDTNSGCLLTVVNGA---HVGNTKSLARSHT-GDFLFT 349 (536)
Q Consensus 280 ~~~~~~~~--~~~~~~~v~~--~~~~~~~l~~~~--d~~i~i~d~~~~~~~~~~~~~---~~~~i~~l~~~~~-~~~l~t 349 (536)
..+.+.+. .+.+...+.. ++|+++++++++ +++|.+||+.+++.+..+..+ |.+....+ ++|+ +..+++
T Consensus 309 ~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s 387 (543)
T 1nir_A 309 YKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWST 387 (543)
T ss_dssp CTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEE
T ss_pred ecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEe
Confidence 98866544 4444444544 458999766554 789999999999988887532 55444443 5777 566777
Q ss_pred Ec-CCCcEEEEEcccCcc-ccccceeeeccCCCCCeEEEEEcC--CeEEEEe-------CCCcEEEEECCcccccCCCCC
Q 009373 350 GG-EDGAIHMYEIINDCT-EANVLLVATWIPHTGPVNSLAFEF--PWLVSAA-------GDGKLSLIDVRKLLRSGRPTS 418 (536)
Q Consensus 350 g~-~dg~i~iwd~~~~~~-~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s-------~dg~i~vwd~~~~~~~~~~~~ 418 (536)
+. .|++|.+||+.+... ....+.+.++.+|.+.+..++++| ++|++++ .+++|.|||+.+.......
T Consensus 388 ~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~-- 465 (543)
T 1nir_A 388 SHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQV-- 465 (543)
T ss_dssp EBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEE--
T ss_pred ccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEE--
Confidence 75 689999999987311 122478899999999999999987 6888887 2779999999986432110
Q ss_pred CCceeeEEeeCCCeeeeccccccEEEEEec--CCEEEEe-----cCCCeEEEEeCCchhhHHH
Q 009373 419 GKRVSRVIEVEPPQRMLHGFECNLLSVDIG--ADRIVCG-----GEEGIVRIWNFSQAFEIER 474 (536)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~sg-----~~Dg~i~vW~~~~~~~~~~ 474 (536)
..+... .-+..+...+..+.++ ++.++.+ +.|+.|.|||..+++++..
T Consensus 466 -------~~v~~~-~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~ 520 (543)
T 1nir_A 466 -------LPIAEW-ADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAV 520 (543)
T ss_dssp -------ECHHHH-HCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEE
T ss_pred -------eechhh-cccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEe
Confidence 000000 0012334556666665 4555533 3589999999999877643
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=3e-22 Score=197.70 Aligned_cols=269 Identities=13% Similarity=0.050 Sum_probs=194.7
Q ss_pred cccEEEEEEecCCC-EEEEEe----CCC----cEEEEEC--CCCcee--eeeCCCCceEEEEe--c--------------
Q 009373 158 TEAVLTVFVLASAK-LLFTSG----YDS----IVRMWHL--EDGFSI--ASSKPLGCTIRAVA--A-------------- 208 (536)
Q Consensus 158 ~~~V~~v~~~~~~~-~l~sgs----~dg----~v~iwd~--~~~~~~--~~~~~~~~~v~~~~--~-------------- 208 (536)
...|....|.+.+. ++++|+ .|| +|++||+ .+++.+ ..+.+|...+..+. +
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 34566667777664 666776 467 8999999 899877 44666766554332 1
Q ss_pred CCCEEEEEeCC------CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCC---eEEE
Q 009373 209 DKKLLVAGGTD------GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDM---TVRV 277 (536)
Q Consensus 209 ~~~~l~sg~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg---~i~i 277 (536)
.+..++.++.+ +.|++||+..+ ....+.+|...|.+++| +++.|++++.|+ .|++
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~--------------~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~ 207 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDGY--------------NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVI 207 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTSC--------------SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCCC--------------CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEE
Confidence 15566666654 79999998643 34566778999999999 778999999885 9999
Q ss_pred EeCCCceEeEeeeccccEEEEe--ecCCEEE-Eec-CC--cEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEc
Q 009373 278 WDRALLKCLKVLRHSDWVYGLA--PHDTTVA-STS-GS--DVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGG 351 (536)
Q Consensus 278 wd~~~~~~~~~~~~~~~v~~~~--~~~~~l~-~~~-d~--~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~ 351 (536)
||+.+++......+...+.+++ |+++.|+ +++ ++ .|++||+.+++.. .+. .|...+.+++|+|+|++|++++
T Consensus 208 ~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~-~~~~~~~~~~~spdg~~l~~~s 285 (415)
T 2hqs_A 208 QTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVT-DGRSNNTEPTWFPDSQNLAFTS 285 (415)
T ss_dssp EETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred EECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCc-CCCCcccceEECCCCCEEEEEE
Confidence 9999998876555777777766 8899777 554 44 4999999998763 443 5788999999999999888887
Q ss_pred C-CC--cEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCC---CcEEEEECCcccccCCCCCCCcee
Q 009373 352 E-DG--AIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGD---GKLSLIDVRKLLRSGRPTSGKRVS 423 (536)
Q Consensus 352 ~-dg--~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~d---g~i~vwd~~~~~~~~~~~~~~~~~ 423 (536)
. ++ .|.+||+.++. ...+..|...+.+++|+| ++|++++.+ +.|++||+.+....
T Consensus 286 ~~~g~~~i~~~d~~~~~-------~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~---------- 348 (415)
T 2hqs_A 286 DQAGRPQVYKVNINGGA-------PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ---------- 348 (415)
T ss_dssp CTTSSCEEEEEETTSSC-------CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE----------
T ss_pred CCCCCcEEEEEECCCCC-------EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE----------
Confidence 6 45 57777877662 234456777899999986 678777764 58999999874211
Q ss_pred eEEeeCCCeeeeccc-cccEEEEEecCCEEEEecCCC---eEEEEeCCch
Q 009373 424 RVIEVEPPQRMLHGF-ECNLLSVDIGADRIVCGGEEG---IVRIWNFSQA 469 (536)
Q Consensus 424 ~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~sg~~Dg---~i~vW~~~~~ 469 (536)
.+..+ .....++++++++|++++.|+ .|++||+..+
T Consensus 349 ----------~l~~~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 349 ----------VLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp ----------ECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred ----------EecCCCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 11122 223344555666888888777 7999998754
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=4.7e-21 Score=204.35 Aligned_cols=303 Identities=13% Similarity=-0.028 Sum_probs=211.9
Q ss_pred cccEEEEEEecCCCEEEEEeC-CC-----cEEEEECCCCceeeeeCCCC--------------------------ceEEE
Q 009373 158 TEAVLTVFVLASAKLLFTSGY-DS-----IVRMWHLEDGFSIASSKPLG--------------------------CTIRA 205 (536)
Q Consensus 158 ~~~V~~v~~~~~~~~l~sgs~-dg-----~v~iwd~~~~~~~~~~~~~~--------------------------~~v~~ 205 (536)
...|.+++|+|||++|++++. |+ .|++||+.+++....+..+. ....+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999998 88 99999999998766654332 23457
Q ss_pred EecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCc
Q 009373 206 VAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALL 283 (536)
Q Consensus 206 ~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~ 283 (536)
++|||+.|++++. +.|.+||+.++.. .....+..|...+.+++| ++++|++++ ++.|++||+.++
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~-----------~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGK-----------AAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCST-----------TSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTT
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCc-----------ceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCC
Confidence 7899999999887 9999999976510 012235567788999999 788888887 569999999988
Q ss_pred eEeEeee-ccc------------------cEEEEeecCCEEEEec-CC--------------------------------
Q 009373 284 KCLKVLR-HSD------------------WVYGLAPHDTTVASTS-GS-------------------------------- 311 (536)
Q Consensus 284 ~~~~~~~-~~~------------------~v~~~~~~~~~l~~~~-d~-------------------------------- 311 (536)
+...... +.. .-..++|+|+.|+.++ ++
T Consensus 183 ~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 262 (741)
T 2ecf_A 183 RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQ 262 (741)
T ss_dssp EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCE
T ss_pred CEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCe
Confidence 7765544 222 2245569999888876 44
Q ss_pred -cEEEEeCCC-CcEEEEEcc-ccccceEEEEEeCCCCEEEEEcC-----CCcEEEEEcccCccccccceeeeccCCCC--
Q 009373 312 -DVYIWDTNS-GCLLTVVNG-AHVGNTKSLARSHTGDFLFTGGE-----DGAIHMYEIINDCTEANVLLVATWIPHTG-- 381 (536)
Q Consensus 312 -~i~i~d~~~-~~~~~~~~~-~~~~~i~~l~~~~~~~~l~tg~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~h~~-- 381 (536)
.|.+||+.+ ++....... .|...+..++| |||++|++++. ++.|++||+.++. ....+..+..
T Consensus 263 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~------~~~~~~~~~~~~ 335 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ------QRVLAHETSPTW 335 (741)
T ss_dssp EEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC------EEEEEEEECSSC
T ss_pred eEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc------eEEEEEcCCCCc
Confidence 788999998 876544322 47788999999 99999987654 5679999998873 3333333332
Q ss_pred --CeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEE---EEEecCCEE-E
Q 009373 382 --PVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLL---SVDIGADRI-V 453 (536)
Q Consensus 382 --~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~~l-~ 453 (536)
.+.+++|+| +++++++.||.+.||.+.... . ...+..+...+. .++++++.| +
T Consensus 336 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~------------------~-~~~l~~~~~~v~~~~~~s~dg~~l~~ 396 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKG------------------K-AAALTHGNWSVDELLAVDEKAGLAYF 396 (741)
T ss_dssp CCCCSCCEECTTSCEEEEECTTSSCEEEEECSSS------------------C-EEESCCSSSCEEEEEEEETTTTEEEE
T ss_pred CCcCCceEECCCCeEEEEecCCCccEEEEEcCCC------------------C-eeeeeecceEEEeEeEEeCCCCEEEE
Confidence 456888976 688888999988888765210 1 122233333343 456677755 5
Q ss_pred EecCCC--eEEEEeCCc-hhhHHHHHHhhhcccchhHHHhhhhccccccCCCCcceeEee
Q 009373 454 CGGEEG--IVRIWNFSQ-AFEIERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQCSVA 510 (536)
Q Consensus 454 sg~~Dg--~i~vW~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 510 (536)
+++.|+ .++||++.. +..+..+. . ......++|+|||+.++.....
T Consensus 397 ~~~~~~~~~~~l~~~~~~g~~~~~l~----~-------~~~~~~~~~spdg~~l~~~~~~ 445 (741)
T 2ecf_A 397 RAGIESARESQIYAVPLQGGQPQRLS----K-------APGMHSASFARNASVYVDSWSN 445 (741)
T ss_dssp EECSSCTTCBEEEEEETTCCCCEECC----C-------SCSEEEEEECTTSSEEEEEEEE
T ss_pred EEeCCCCceEEEEEEEcCCCCeeecc----c-------CCCceEEEECCCCCEEEEEecC
Confidence 666666 899999864 32221111 0 1223578999999999875443
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=1.4e-20 Score=185.71 Aligned_cols=254 Identities=11% Similarity=-0.002 Sum_probs=189.5
Q ss_pred eeeeCccccEEEEEEecC--------------CCEEEEEeCC------CcEEEEECCCCceeeeeCCCCceEEE--EecC
Q 009373 152 DVLYGHTEAVLTVFVLAS--------------AKLLFTSGYD------SIVRMWHLEDGFSIASSKPLGCTIRA--VAAD 209 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~--------------~~~l~sgs~d------g~v~iwd~~~~~~~~~~~~~~~~v~~--~~~~ 209 (536)
..+.+|...+..+++++. +..++.++.+ +.|++||++. .....+..|...+.+ ++|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCC
Confidence 568899998888887751 5556655554 7999999974 455666666666654 5699
Q ss_pred CCEEEEEeCCC---cEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEE-EEecCCe--EEEEeCC
Q 009373 210 KKLLVAGGTDG---FIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIY-SGSWDMT--VRVWDRA 281 (536)
Q Consensus 210 ~~~l~sg~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~-s~s~dg~--i~iwd~~ 281 (536)
|+.|++++.++ .|++||+.++. ...+..|.+.+.+++| +++.|+ +++.|+. |++||+.
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~--------------~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~ 255 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGA--------------VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA 255 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCC--------------EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCEEEEEEecCCCcEEEEEECCCCc--------------EEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC
Confidence 99999999885 99999997763 2346678889999999 677777 6666654 9999999
Q ss_pred CceEeEeeeccccEEEEe--ecCCEEEEec--CC--cEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCC--
Q 009373 282 LLKCLKVLRHSDWVYGLA--PHDTTVASTS--GS--DVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGED-- 353 (536)
Q Consensus 282 ~~~~~~~~~~~~~v~~~~--~~~~~l~~~~--d~--~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~d-- 353 (536)
+++......+...+.++. |+++.|+.++ ++ .|.+||+.+++... +. .+...+.+++|+|+|++|++++.+
T Consensus 256 ~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l~-~~~~~~~~~~~spdG~~l~~~~~~~g 333 (415)
T 2hqs_A 256 SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-IT-WEGSQNQDADVSSDGKFMVMVSSNGG 333 (415)
T ss_dssp TCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-CC-CSSSEEEEEEECTTSSEEEEEEECSS
T ss_pred CCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-Ee-cCCCcccCeEECCCCCEEEEEECcCC
Confidence 888755445777777766 8999888776 34 68888998887433 32 366788999999999999888764
Q ss_pred -CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCC---cEEEEECCcccccCCCCCCCceeeEEe
Q 009373 354 -GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDG---KLSLIDVRKLLRSGRPTSGKRVSRVIE 427 (536)
Q Consensus 354 -g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~ 427 (536)
+.|++||+.++. . ..+..|. .+.+++|+| .+|++++.++ .|++||+...
T Consensus 334 ~~~i~~~d~~~~~------~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~----------------- 388 (415)
T 2hqs_A 334 QQHIAKQDLATGG------V-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR----------------- 388 (415)
T ss_dssp CEEEEEEETTTCC------E-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC-----------------
T ss_pred ceEEEEEECCCCC------E-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC-----------------
Confidence 589999998872 2 3344554 899999986 6788888776 7999998642
Q ss_pred eCCCeeeeccccccEEEEEecCC
Q 009373 428 VEPPQRMLHGFECNLLSVDIGAD 450 (536)
Q Consensus 428 ~~~~~~~~~~~~~~v~~~~~~~~ 450 (536)
....+.+|...|.++++++.
T Consensus 389 ---~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 389 ---FKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp ---CEEECCCSSSEEEEEEECCC
T ss_pred ---cEEEeeCCCCCCcCCccccc
Confidence 22345667777888888764
No 132
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=6.2e-20 Score=202.57 Aligned_cols=321 Identities=9% Similarity=0.035 Sum_probs=224.3
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCC------CcEEEEECCCCceeeeeCCCCceE---------EEEecCCCEEE
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYD------SIVRMWHLEDGFSIASSKPLGCTI---------RAVAADKKLLV 214 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~d------g~v~iwd~~~~~~~~~~~~~~~~v---------~~~~~~~~~l~ 214 (536)
..+.+.+|...|.+++|+|||++||+++.+ ..|++|++.+++ ...+..|...+ .+++|||++++
T Consensus 44 ~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~ 122 (1045)
T 1k32_A 44 STRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLII 122 (1045)
T ss_dssp CEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEE
T ss_pred cEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEEE
Confidence 357888999999999999999999988653 479999998876 56677777655 56679999777
Q ss_pred EEeCC------CcEEEEEcccCccceecccCc------------------------------------ccccceEEeeCC
Q 009373 215 AGGTD------GFIHCWRAVEVLPHLFDISGS------------------------------------EKQNTQFRLWEH 252 (536)
Q Consensus 215 sg~~d------g~i~vwd~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~h 252 (536)
+++.+ ..|.+|++.++.......... ........+.+|
T Consensus 123 ~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~ 202 (1045)
T 1k32_A 123 STDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDM 202 (1045)
T ss_dssp EECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECC
T ss_pred EECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCC
Confidence 77754 458888877664321110000 000123345688
Q ss_pred ccCEEEEEEeCCE-EEEEecCCeEEEEeCCC-ceEeEeee-cc-ccEEEEeecCCEEEEecCCcEEEEeCCCCcEEEEEc
Q 009373 253 EGPITSLALDLTR-IYSGSWDMTVRVWDRAL-LKCLKVLR-HS-DWVYGLAPHDTTVASTSGSDVYIWDTNSGCLLTVVN 328 (536)
Q Consensus 253 ~~~v~~l~~~~~~-l~s~s~dg~i~iwd~~~-~~~~~~~~-~~-~~v~~~~~~~~~l~~~~d~~i~i~d~~~~~~~~~~~ 328 (536)
.+.+.++.|.++. +++++.|+++.+|.+.. +.....+. +. ....+++|+|+.++.+.++.|.+||+...+ +..+.
T Consensus 203 ~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~-l~~l~ 281 (1045)
T 1k32_A 203 STHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEK-IEKIE 281 (1045)
T ss_dssp SSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCC-EEECC
T ss_pred CCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceE-eeeec
Confidence 9999999996655 45677889999997653 33333443 22 234567799999999899999999995444 33443
Q ss_pred c----------ccccceEEEEEe-CCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCC-CeEEEEEc-CCeEEE
Q 009373 329 G----------AHVGNTKSLARS-HTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTG-PVNSLAFE-FPWLVS 395 (536)
Q Consensus 329 ~----------~~~~~i~~l~~~-~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~-~v~~l~~~-~~~l~s 395 (536)
. .|...+.+++|+ |+|++|++++ ++.|.+|++..+. ...+..|.. .+..++|+ +..|++
T Consensus 282 ~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~sdg~~l~~ 353 (1045)
T 1k32_A 282 IGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY-------VLKVPEPLRIRYVRRGGDTKVAFIH 353 (1045)
T ss_dssp CCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB-------EEECSCCSCEEEEEECSSSEEEEEE
T ss_pred cCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc-------eEEccCCCcceEEeeeEcCCCeEEE
Confidence 2 134478999999 9999998887 7899999987762 233566777 88999997 347888
Q ss_pred EeCCCcEE-EEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEE--ecCCEEEEecCCCeEEEEeCCchhhH
Q 009373 396 AAGDGKLS-LIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVD--IGADRIVCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 396 ~s~dg~i~-vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~Dg~i~vW~~~~~~~~ 472 (536)
++.++.+. +||+.+... ..+.+|...+..+. +++++|++++.|+.|++||+.++...
T Consensus 354 ~s~~~~l~~~~d~~~~~~--------------------~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~ 413 (1045)
T 1k32_A 354 GTREGDFLGIYDYRTGKA--------------------EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPT 413 (1045)
T ss_dssp EETTEEEEEEEETTTCCE--------------------EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EECCCceEEEEECCCCCc--------------------eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceE
Confidence 88888888 889875311 11123444455555 45569999999999999999987543
Q ss_pred HHHHHhhhcccchhHHHhhhhccccccCCCCcceeEee
Q 009373 473 ERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQCSVA 510 (536)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 510 (536)
... .+ .......++|+|||+.+++++..
T Consensus 414 ~~~----~~------~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 414 VIE----RS------REAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp EEE----EC------SSSCCCCEEECTTSCEEEEEEEE
T ss_pred Eec----cC------CCCCccceEECCCCCeEEEEecC
Confidence 211 00 11234688999999999887664
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.84 E-value=3.6e-18 Score=163.30 Aligned_cols=278 Identities=8% Similarity=-0.015 Sum_probs=182.5
Q ss_pred EEecCCC-EEEEEeCCCcEEEEECCCCceeeeeCCCCc-eEEEEecCCCEEEEEeC-CCcEEEEEcccCccceecccCcc
Q 009373 165 FVLASAK-LLFTSGYDSIVRMWHLEDGFSIASSKPLGC-TIRAVAADKKLLVAGGT-DGFIHCWRAVEVLPHLFDISGSE 241 (536)
Q Consensus 165 ~~~~~~~-~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~ 241 (536)
.|.++++ .+++++.++.|.+||+.+++.+..+..+.. ...+++|+++.+++++. ++.|.+||+.++..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~--------- 74 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPP--------- 74 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSSC---------
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCce---------
Confidence 3555544 577888899999999999988777654433 35566799986666655 89999999977631
Q ss_pred cccceEEeeCCccCEEEEEE--eCCEEEEEecCC---eEEEEeCCCceEeEeeeccccEEEEe--ecCCEEEEe-c-CCc
Q 009373 242 KQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDM---TVRVWDRALLKCLKVLRHSDWVYGLA--PHDTTVAST-S-GSD 312 (536)
Q Consensus 242 ~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~-~-d~~ 312 (536)
....+..+..+..+++| ++++++++..++ .|.+||+.+++.+..+.......++. |++++++++ . ++.
T Consensus 75 ---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 75 ---KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSAN 151 (331)
T ss_dssp ---EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTT
T ss_pred ---eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCc
Confidence 13444455555555788 677888655553 89999999999988887555556655 888755554 4 578
Q ss_pred -EEEEeCCCCcEEEEE---ccccccceEEEEEeCCCCEE-EEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEE
Q 009373 313 -VYIWDTNSGCLLTVV---NGAHVGNTKSLARSHTGDFL-FTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLA 387 (536)
Q Consensus 313 -i~i~d~~~~~~~~~~---~~~~~~~i~~l~~~~~~~~l-~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~ 387 (536)
+.+|++.....+... .......+..++|+|+|+++ +++..++.|.+||+.++... ..+..+.. ...+..++
T Consensus 152 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~---~~~~~~~~-~~~~~~~~ 227 (331)
T 3u4y_A 152 TVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI---TLLNAVGT-NNLPGTIV 227 (331)
T ss_dssp EEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC---EEEEEEEC-SSCCCCEE
T ss_pred eEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc---ceeeeccC-CCCCceEE
Confidence 999998764433111 01234568999999999965 45557899999999877320 11444443 36678899
Q ss_pred EcC--CeEEEEe-CCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeecccc---ccEEEEEecCCEE-EEecCCCe
Q 009373 388 FEF--PWLVSAA-GDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFE---CNLLSVDIGADRI-VCGGEEGI 460 (536)
Q Consensus 388 ~~~--~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~l-~sg~~Dg~ 460 (536)
|+| ++|++++ .++.|.+||+.++.... +........ ..... ....++++++++| +++..++.
T Consensus 228 ~spdg~~l~v~~~~~~~i~~~d~~~~~~~~----------~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 296 (331)
T 3u4y_A 228 VSRDGSTVYVLTESTVDVFNFNQLSGTLSF----------VKSFGHGLL-IDPRPLFGANQMALNKTETKLFISANISRE 296 (331)
T ss_dssp ECTTSSEEEEECSSEEEEEEEETTTTEEEE----------EEEEECCCC-CCCGGGTTCCCEEECTTSSEEEEEETTTTE
T ss_pred ECCCCCEEEEEEcCCCEEEEEECCCCceee----------ecccccccc-cCCCCcccccceEECCCCCEEEEecCCCCc
Confidence 986 5565554 57889999998753210 000000000 00111 1225667777765 56666789
Q ss_pred EEEEeCCch
Q 009373 461 VRIWNFSQA 469 (536)
Q Consensus 461 i~vW~~~~~ 469 (536)
|.+||+.+.
T Consensus 297 v~v~d~~~~ 305 (331)
T 3u4y_A 297 LKVFTISGK 305 (331)
T ss_dssp EEEEETTSC
T ss_pred EEEEEecCC
Confidence 999999864
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.84 E-value=5.2e-19 Score=169.44 Aligned_cols=261 Identities=11% Similarity=-0.008 Sum_probs=183.9
Q ss_pred CEEEEEeCCCcEEEEECCCCceeeeeCC-C---CceEEEEecCCCEE-EEEeCCCcEEEEEcccCccceecccCcccccc
Q 009373 171 KLLFTSGYDSIVRMWHLEDGFSIASSKP-L---GCTIRAVAADKKLL-VAGGTDGFIHCWRAVEVLPHLFDISGSEKQNT 245 (536)
Q Consensus 171 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~---~~~v~~~~~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 245 (536)
++|++++.++.|.+||+.+++.+..+.. + .....+++|+++.+ ++++.++.|.+||+.++..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~------------- 68 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET------------- 68 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE-------------
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe-------------
Confidence 4789999999999999999988877753 3 24556788999765 5566689999999977641
Q ss_pred eEEee-C----CccCEEEEEE--eCCEEEEEe------------cCCeEEEEeCCCceEeEeeeccccEEE--EeecCCE
Q 009373 246 QFRLW-E----HEGPITSLAL--DLTRIYSGS------------WDMTVRVWDRALLKCLKVLRHSDWVYG--LAPHDTT 304 (536)
Q Consensus 246 ~~~~~-~----h~~~v~~l~~--~~~~l~s~s------------~dg~i~iwd~~~~~~~~~~~~~~~v~~--~~~~~~~ 304 (536)
...+. + |...+.+++| +++++++++ .++.|.+||+.+++....+.....+.+ ++|++++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 69 LGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSK 148 (337)
T ss_dssp EEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSC
T ss_pred EeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCE
Confidence 11121 1 1224567788 677888876 579999999999988877764444444 4588987
Q ss_pred EEEecCCcEEEEeCCCCcEEEEEcccc-ccceEEEEEeCCCCEEEEEcCCC------------------------cEEEE
Q 009373 305 VASTSGSDVYIWDTNSGCLLTVVNGAH-VGNTKSLARSHTGDFLFTGGEDG------------------------AIHMY 359 (536)
Q Consensus 305 l~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~l~tg~~dg------------------------~i~iw 359 (536)
++++ ++.|.+||+.+++....+..+. ... +.|+|++..++..+.++ .|.+|
T Consensus 149 l~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 224 (337)
T 1pby_B 149 LYGL-GRDLHVMDPEAGTLVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTM 224 (337)
T ss_dssp EEEE-SSSEEEEETTTTEEEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEE
T ss_pred EEEe-CCeEEEEECCCCcEeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEE
Confidence 7777 7899999999999887775332 122 37899988765554332 46899
Q ss_pred EcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeecc
Q 009373 360 EIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHG 437 (536)
Q Consensus 360 d~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (536)
|+.++.. . ...+..+...+.+++|+| .+++++ ++.|.+||+.+...... ...+
T Consensus 225 d~~~~~~----~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~------------------~~~~ 279 (337)
T 1pby_B 225 DLETGEM----A-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKR------------------VPLP 279 (337)
T ss_dssp ETTTCCE----E-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEE------------------EECS
T ss_pred eCCCCCc----e-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcce------------------ecCC
Confidence 9887732 1 233445667888999987 577777 79999999986422110 0111
Q ss_pred ccccEEEEEecCCEEEEecCCCeEEEEeCCchhhHH
Q 009373 438 FECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFEIE 473 (536)
Q Consensus 438 ~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~~ 473 (536)
+.....++++++++|++++.|+.|++||+.+++.+.
T Consensus 280 ~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 280 HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEE
T ss_pred CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEE
Confidence 223334555667788888999999999999876543
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.83 E-value=8.1e-18 Score=162.33 Aligned_cols=233 Identities=11% Similarity=0.036 Sum_probs=171.1
Q ss_pred ccccEEEEEEecCCCEEEEEeC-------CCcEEEEECCCCceeeeeCCC-CceEEEEecCCCEEE-EEeCCCcEEEEEc
Q 009373 157 HTEAVLTVFVLASAKLLFTSGY-------DSIVRMWHLEDGFSIASSKPL-GCTIRAVAADKKLLV-AGGTDGFIHCWRA 227 (536)
Q Consensus 157 h~~~V~~v~~~~~~~~l~sgs~-------dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~l~-sg~~dg~i~vwd~ 227 (536)
....+..++|+|+++++++++. ++.|.+||..+++.+..+... ...-.+++++++.++ ++..++.|.+||.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 3456889999999998888874 568999999999887776432 233467789998554 5556799999999
Q ss_pred ccCccceecccCcccccceEEeeCCcc---------CEEEEEE--eCCEEEEEe--cCCeEEEEeCCCceEeEeee-ccc
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEG---------PITSLAL--DLTRIYSGS--WDMTVRVWDRALLKCLKVLR-HSD 293 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~l~~--~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~-~~~ 293 (536)
.++. ....+..+.. .+.++++ +++.+++++ .++.|.+||..+++....+. +..
T Consensus 119 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 185 (353)
T 3vgz_A 119 KTGE-------------VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK 185 (353)
T ss_dssp TTCC-------------EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT
T ss_pred CCCe-------------eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC
Confidence 8764 2222222221 2677888 667777665 48899999999999988887 444
Q ss_pred cEE--EEeecCCEEEEec-CCcEEEEeCCCCcEEEEEcc---ccccceEEEEEeCCCCEEEEEcC-CCcEEEEEcccCcc
Q 009373 294 WVY--GLAPHDTTVASTS-GSDVYIWDTNSGCLLTVVNG---AHVGNTKSLARSHTGDFLFTGGE-DGAIHMYEIINDCT 366 (536)
Q Consensus 294 ~v~--~~~~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~---~~~~~i~~l~~~~~~~~l~tg~~-dg~i~iwd~~~~~~ 366 (536)
.+. .++++++.++++. ++.|.+||+.+++....+.. ++...+..++|+|+++++++++. ++.|.+||+.++
T Consensus 186 ~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~-- 263 (353)
T 3vgz_A 186 MSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG-- 263 (353)
T ss_dssp TCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC--
T ss_pred ccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC--
Confidence 444 4558899888877 89999999999998877753 24556888999999997766655 599999999887
Q ss_pred ccccceeeeccCCCCCeEEEEEcC--CeEEEEe-CCCcEEEEECCcc
Q 009373 367 EANVLLVATWIPHTGPVNSLAFEF--PWLVSAA-GDGKLSLIDVRKL 410 (536)
Q Consensus 367 ~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s-~dg~i~vwd~~~~ 410 (536)
..+..+.... ...++|+| +++++++ .++.|.+||+.+.
T Consensus 264 ----~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 264 ----NILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp ----CEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred ----cEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 3333333322 25688876 5555555 6899999999874
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.83 E-value=7.6e-20 Score=194.45 Aligned_cols=304 Identities=8% Similarity=-0.014 Sum_probs=200.3
Q ss_pred cEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCC-----ceEEEEecCCCEEEEEeCC---------CcEEEE
Q 009373 160 AVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLG-----CTIRAVAADKKLLVAGGTD---------GFIHCW 225 (536)
Q Consensus 160 ~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~l~sg~~d---------g~i~vw 225 (536)
.+.+++|+|+|+++++ +.||+|++||+.+++....+..+. ..-.+++|||++|++++.+ +.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 3567899999997776 789999999999998887777665 3456788999999999875 788899
Q ss_pred EcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccE-------
Q 009373 226 RAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWV------- 295 (536)
Q Consensus 226 d~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v------- 295 (536)
|+.++... .+....+|...+..++| +++.|++++. +.|++||+.+++...... +...+
T Consensus 97 d~~~~~~~-----------~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 164 (723)
T 1xfd_A 97 KIPHGDPQ-----------SLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSD 164 (723)
T ss_dssp ESSSCCCE-----------ECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECC
T ss_pred ECCCCceE-----------eccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccc
Confidence 99876421 11112245555778888 7888998886 899999999887765544 22222
Q ss_pred -------------EEEeecCCEEEEec-CC----------------------------------cEEEEeCCCCcEEEEE
Q 009373 296 -------------YGLAPHDTTVASTS-GS----------------------------------DVYIWDTNSGCLLTVV 327 (536)
Q Consensus 296 -------------~~~~~~~~~l~~~~-d~----------------------------------~i~i~d~~~~~~~~~~ 327 (536)
..++|+|+.|+.++ ++ .|++||+.+++....+
T Consensus 165 ~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l 244 (723)
T 1xfd_A 165 WLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEM 244 (723)
T ss_dssp HHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEEC
T ss_pred eeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEe
Confidence 34459999988876 32 7999999988865555
Q ss_pred ccc-----cccceEEEEEeCCCCEEEEEcC----CCcEEEEEcccCccccccceeeecc-CCCCCe----EEEEEcC--C
Q 009373 328 NGA-----HVGNTKSLARSHTGDFLFTGGE----DGAIHMYEIINDCTEANVLLVATWI-PHTGPV----NSLAFEF--P 391 (536)
Q Consensus 328 ~~~-----~~~~i~~l~~~~~~~~l~tg~~----dg~i~iwd~~~~~~~~~~~~~~~~~-~h~~~v----~~l~~~~--~ 391 (536)
... +...+..++|+|||+++++.+. +..|++||+.++. ....+. .+...+ ..++|+| +
T Consensus 245 ~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~------~~~~~~~~~~~~~~~~~~~~~~spdg~ 318 (723)
T 1xfd_A 245 MPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV------CTKKHEDESEAWLHRQNEEPVFSKDGR 318 (723)
T ss_dssp CCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC------EEEEEEEECSSCCCCCCCCCEECTTSC
T ss_pred eCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc------ceEEEEeccCCEEeccCCCceEcCCCC
Confidence 421 2567899999999998877643 3579999998873 222222 233333 3788986 4
Q ss_pred eEEE--EeCCC------cEEEEEC-Ccccc--cCCCCCCCceeeEEeeCCCeeeeccccc--cEEEEEecCCEEEEec-C
Q 009373 392 WLVS--AAGDG------KLSLIDV-RKLLR--SGRPTSGKRVSRVIEVEPPQRMLHGFEC--NLLSVDIGADRIVCGG-E 457 (536)
Q Consensus 392 ~l~s--~s~dg------~i~vwd~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~l~sg~-~ 457 (536)
.|+. +..++ .|.+||+ .+... ... ...++.. .+.+++++++.|+..+ .
T Consensus 319 ~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~------------------l~~~~~~~~~~~~~spdg~~l~~~~~~ 380 (723)
T 1xfd_A 319 KFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQS------------------ITSGDWDVTKILAYDEKGNKIYFLSTE 380 (723)
T ss_dssp SEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCB------------------SCCSSSCEEEEEEEETTTTEEEEEESS
T ss_pred eEEEEEecccCCCcceeEEEEEeccCCCCccceeE------------------eecCCeEEEeeeEEcCCCCEEEEEEcC
Confidence 4553 55677 5667773 33210 110 0111111 2246777788776544 4
Q ss_pred C--CeEEEEeCCchhh--HHHHHHhhhcccchhHHHhhhhccccccCCCCccee
Q 009373 458 E--GIVRIWNFSQAFE--IERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQC 507 (536)
Q Consensus 458 D--g~i~vW~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 507 (536)
+ +.+++|++..... ......... .......++|+|+|+.++..
T Consensus 381 ~~~~~~~l~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 381 DLPRRRQLYSANTVGNFNRQCLSCDLV-------ENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp SCTTCCEEEEECSSTTCCCBCSSTTSS-------SSCCCCEEEECTTSSEEEEE
T ss_pred CCCcceEEEEEeCCCCCCcceeccccc-------CCCCeEEEEECCCCCEEEEE
Confidence 4 8899999875321 111100000 01224578999999988864
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.83 E-value=4.2e-18 Score=163.53 Aligned_cols=269 Identities=12% Similarity=0.148 Sum_probs=168.1
Q ss_pred EEEEEeCCCcEEEEECC-CC--ceeeeeC-CCCceEEEEecCCCEEEEEeCC-CcEEEEEcc--cCccceecccCccccc
Q 009373 172 LLFTSGYDSIVRMWHLE-DG--FSIASSK-PLGCTIRAVAADKKLLVAGGTD-GFIHCWRAV--EVLPHLFDISGSEKQN 244 (536)
Q Consensus 172 ~l~sgs~dg~v~iwd~~-~~--~~~~~~~-~~~~~v~~~~~~~~~l~sg~~d-g~i~vwd~~--~~~~~~~~~~~~~~~~ 244 (536)
++++++.|+.|++|++. ++ +.+..+. .......+++|++++|++++.+ +.|.+|++. ++. ..
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~-----------~~ 75 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA-----------LT 75 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC-----------EE
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc-----------ee
Confidence 44555789999999995 33 2333332 2233446778999988888887 999999986 332 11
Q ss_pred ceEEeeCCccCEEEEEE--eCCEEEEEe-cCCeEEEEeC---CCceEeEeeeccccEEE--EeecCCEEEEec--CCcEE
Q 009373 245 TQFRLWEHEGPITSLAL--DLTRIYSGS-WDMTVRVWDR---ALLKCLKVLRHSDWVYG--LAPHDTTVASTS--GSDVY 314 (536)
Q Consensus 245 ~~~~~~~h~~~v~~l~~--~~~~l~s~s-~dg~i~iwd~---~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~--d~~i~ 314 (536)
....+..+. .+..++| +++++++++ .++.|.+||+ .+.+....+.....+.+ ++++++.+++++ ++.|.
T Consensus 76 ~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 76 FAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRIC 154 (343)
T ss_dssp EEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred eccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEE
Confidence 223333333 6788888 667776665 4889999999 44445555554444554 448888776664 79999
Q ss_pred EEeCCC-CcEEE----EEccccccceEEEEEeCCCCEEEE-EcCCCcEEEEEcccCcccc-ccceeeeccC---CCCCeE
Q 009373 315 IWDTNS-GCLLT----VVNGAHVGNTKSLARSHTGDFLFT-GGEDGAIHMYEIINDCTEA-NVLLVATWIP---HTGPVN 384 (536)
Q Consensus 315 i~d~~~-~~~~~----~~~~~~~~~i~~l~~~~~~~~l~t-g~~dg~i~iwd~~~~~~~~-~~~~~~~~~~---h~~~v~ 384 (536)
+||+.+ ++... .........+..++|+|+++++++ +..++.|.+|++....... .......+.. ....+.
T Consensus 155 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 234 (343)
T 1ri6_A 155 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAA 234 (343)
T ss_dssp EEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEE
T ss_pred EEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCcc
Confidence 999987 65432 222223457889999999997654 4588999999996421100 0111221221 134677
Q ss_pred EEEEcC--CeEE-EEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeec-cccccEEEEEecCCEEEEec-CCC
Q 009373 385 SLAFEF--PWLV-SAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLH-GFECNLLSVDIGADRIVCGG-EEG 459 (536)
Q Consensus 385 ~l~~~~--~~l~-s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~l~sg~-~Dg 459 (536)
+++|+| ++|+ ++..++.|.+||+...... ...+ ..+. +.....+++++++++|++++ .|+
T Consensus 235 ~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~--------~~~~-------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 299 (343)
T 1ri6_A 235 DIHITPDGRHLYACDRTASLITVFSVSEDGSV--------LSKE-------GFQPTETQPRGFNVDHSGKYLIAAGQKSH 299 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSCC--------EEEE-------EEEECSSSCCCEEECTTSSEEEEECTTTC
T ss_pred ceEECCCCCEEEEEecCCCEEEEEEEcCCCCc--------eEEe-------eeecCCCccceEEECCCCCEEEEecCCCC
Confidence 899986 4666 4557999999999731000 0000 0111 11123345556667676666 689
Q ss_pred eEEEEeCC
Q 009373 460 IVRIWNFS 467 (536)
Q Consensus 460 ~i~vW~~~ 467 (536)
.|.+|+++
T Consensus 300 ~v~v~~~d 307 (343)
T 1ri6_A 300 HISVYEIV 307 (343)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEc
Confidence 99999654
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=1.2e-18 Score=192.28 Aligned_cols=317 Identities=10% Similarity=0.012 Sum_probs=223.5
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCC-------------CceEEEEe-cCCCEEEEE
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPL-------------GCTIRAVA-ADKKLLVAG 216 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-------------~~~v~~~~-~~~~~l~sg 216 (536)
.+.+.+|. .+...+|+|+|+.|+.+. ++.|.+|++... .+..+..+ .....+++ |+|+.|+++
T Consensus 238 ~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~ 314 (1045)
T 1k32_A 238 LRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFV 314 (1045)
T ss_dssp CEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEE
T ss_pred ceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCCCCCEEEEE
Confidence 34555665 466789999999998875 899999999544 34455443 24567889 999999988
Q ss_pred eCCCcEEEEEcccCccceecccCcccccceEEeeCCcc-CEEEEEE-eCCEEEEEecCCeEE-EEeCCCceEeEeeeccc
Q 009373 217 GTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEG-PITSLAL-DLTRIYSGSWDMTVR-VWDRALLKCLKVLRHSD 293 (536)
Q Consensus 217 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~-~~~~l~s~s~dg~i~-iwd~~~~~~~~~~~~~~ 293 (536)
+ ++.|.+|++.++. ...+..|.. .+..++| +++.|++++.++.+. +||+.+++......+..
T Consensus 315 ~-~~~i~~~~~~~~~--------------~~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~ 379 (1045)
T 1k32_A 315 S-RGQAFIQDVSGTY--------------VLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLG 379 (1045)
T ss_dssp E-TTEEEEECTTSSB--------------EEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCCCCC
T ss_pred E-cCEEEEEcCCCCc--------------eEEccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCceEecCCcc
Confidence 8 8899999986542 233556666 7888888 567888888888898 99998876554444556
Q ss_pred cEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCC----------cEEEEE
Q 009373 294 WVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDG----------AIHMYE 360 (536)
Q Consensus 294 ~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg----------~i~iwd 360 (536)
.+..++ |+++.+++++ ++.|++||+.+++...... +|.+.+.+++|+|+|++|++++.++ .|++||
T Consensus 380 ~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~-~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER-SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp SEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred ceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc-CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEE
Confidence 676665 8999998887 7899999999998777664 5888899999999999998887654 899999
Q ss_pred cccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeE-------------
Q 009373 361 IINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRV------------- 425 (536)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~------------- 425 (536)
+.++ . ...+..|...+.+++|+| .+|++++.++...+|+.......... +.....+
T Consensus 459 ~~~g------~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 529 (1045)
T 1k32_A 459 MEGR------K-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEV--VSKPFVIPLIPGSPNPTKLV 529 (1045)
T ss_dssp TTTT------E-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCS--CBEEEEEESSTTCCCGGGCC
T ss_pred CCCC------c-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcccccccc--CceeEEEEeCCCCCCccccC
Confidence 9876 3 556778888899999986 68999999888888886533211100 0000000
Q ss_pred ----------EeeC---CCeeeeccccccEEEEEecCC--EEEE-------------ecCCCeEEEEeCCchhhHHHHHH
Q 009373 426 ----------IEVE---PPQRMLHGFECNLLSVDIGAD--RIVC-------------GGEEGIVRIWNFSQAFEIERRAR 477 (536)
Q Consensus 426 ----------~~~~---~~~~~~~~~~~~v~~~~~~~~--~l~s-------------g~~Dg~i~vW~~~~~~~~~~~~~ 477 (536)
..+. .....+..+...+..+.++++ ++++ .+.++.|.+||+.+++...
T Consensus 530 ~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~---- 605 (1045)
T 1k32_A 530 PRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE---- 605 (1045)
T ss_dssp CGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEE----
T ss_pred cCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEE----
Confidence 0000 011223345555666666655 5664 2235678888888765210
Q ss_pred hhhcccchhHHHhhhhccccccCCCCcceeEe
Q 009373 478 ALRGIRLENRMRRRKLQTEMSSKGGRTDQCSV 509 (536)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 509 (536)
.. .....+++||||+.+++++-
T Consensus 606 ----l~------~~v~~~~~S~DG~~l~~~~~ 627 (1045)
T 1k32_A 606 ----VK------NNLTDLRLSADRKTVMVRKD 627 (1045)
T ss_dssp ----EE------EEEEEEEECTTSCEEEEEET
T ss_pred ----ee------cCcceEEECCCCCEEEEEcC
Confidence 00 23467899999999997653
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.82 E-value=4.8e-18 Score=180.02 Aligned_cols=282 Identities=11% Similarity=0.039 Sum_probs=182.8
Q ss_pred ccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCC-CCceEEEEecCCCEEEEEeCCCcEEEEEccc-----Ccc
Q 009373 159 EAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKP-LGCTIRAVAADKKLLVAGGTDGFIHCWRAVE-----VLP 232 (536)
Q Consensus 159 ~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~-----~~~ 232 (536)
..|.+++|+|+ ..++.+. |+.|++||+.+++....... ....-.+++|+|+.|+++ .++.|++|++.+ +..
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc
Confidence 56999999999 6555554 59999999998876544332 122335788999999985 789999999987 532
Q ss_pred ceecccCcccc-cceEEeeCCccCEEEEEE--eCCEEEEEe---------------------------------cCCeEE
Q 009373 233 HLFDISGSEKQ-NTQFRLWEHEGPITSLAL--DLTRIYSGS---------------------------------WDMTVR 276 (536)
Q Consensus 233 ~~~~~~~~~~~-~~~~~~~~h~~~v~~l~~--~~~~l~s~s---------------------------------~dg~i~ 276 (536)
........... ........+.+.+.++.| |+++|++++ .+..|.
T Consensus 159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 238 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG 238 (706)
T ss_dssp EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence 11100000000 000000111223578888 788899887 446899
Q ss_pred EEeCCCceEeEeee---ccccEEEEe--ecCCEEEEec-CC-----cEEEEeCCCCcEEEEEc-ccccc---ceEEEEEe
Q 009373 277 VWDRALLKCLKVLR---HSDWVYGLA--PHDTTVASTS-GS-----DVYIWDTNSGCLLTVVN-GAHVG---NTKSLARS 341 (536)
Q Consensus 277 iwd~~~~~~~~~~~---~~~~v~~~~--~~~~~l~~~~-d~-----~i~i~d~~~~~~~~~~~-~~~~~---~i~~l~~~ 341 (536)
+||+.+++...... +...+.++. |+++.+++++ +. .|.+||+.+++....+. ..+.. .+..+.|+
T Consensus 239 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~s 318 (706)
T 2z3z_A 239 IYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFL 318 (706)
T ss_dssp EEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEEC
T ss_pred EEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceee
Confidence 99999988655442 455666665 8999888765 54 89999999994443332 11222 24678999
Q ss_pred C--CCCEEEEEcCCCcEEEEEcc-cCccccccceeeeccCCCCCeEE-EEEcC--CeEEEEe-CCC----cEEEEECCcc
Q 009373 342 H--TGDFLFTGGEDGAIHMYEII-NDCTEANVLLVATWIPHTGPVNS-LAFEF--PWLVSAA-GDG----KLSLIDVRKL 410 (536)
Q Consensus 342 ~--~~~~l~tg~~dg~i~iwd~~-~~~~~~~~~~~~~~~~h~~~v~~-l~~~~--~~l~s~s-~dg----~i~vwd~~~~ 410 (536)
| +|+++++++.||.+++|++. ++ ..+..+..|...+.+ ++|+| +.|+.++ .++ .|..||+.+.
T Consensus 319 p~~dg~~l~~~~~~g~~~l~~~~~~~------~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 319 PGSNNQFIWQSRRDGWNHLYLYDTTG------RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG 392 (706)
T ss_dssp TTCSSEEEEEECTTSSCEEEEEETTS------CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC
T ss_pred cCCCCEEEEEEccCCccEEEEEECCC------CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC
Confidence 9 99999999999999999987 33 345666778888877 79986 4565544 444 5666676553
Q ss_pred cccCCCCCCCceeeEEeeCCCeeeeccccccEE--EEEecCCEEEEecCC----CeEEEEeCCchh
Q 009373 411 LRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLL--SVDIGADRIVCGGEE----GIVRIWNFSQAF 470 (536)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~l~sg~~D----g~i~vW~~~~~~ 470 (536)
... ... +...+. ++++++++++.++.+ +.|++||+.+++
T Consensus 393 ~~~-------------------~l~--~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 393 KTK-------------------DLT--PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp CCE-------------------ESC--CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred Cce-------------------ecc--CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 110 011 222334 444555666655333 569999998875
No 140
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.81 E-value=6.9e-18 Score=174.56 Aligned_cols=227 Identities=11% Similarity=0.038 Sum_probs=163.2
Q ss_pred cccEEEEEEecCCCEEEEEeC-CCcEEEEECCCCceeeeeCCCCceEEEEe--cCCCEEEEEeC---CCcEEEEEccc--
Q 009373 158 TEAVLTVFVLASAKLLFTSGY-DSIVRMWHLEDGFSIASSKPLGCTIRAVA--ADKKLLVAGGT---DGFIHCWRAVE-- 229 (536)
Q Consensus 158 ~~~V~~v~~~~~~~~l~sgs~-dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~l~sg~~---dg~i~vwd~~~-- 229 (536)
..+|++++|+|||+.||+++. ||+++||++++++.......+...+..+. |+ +.+++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 557999999999999999887 99999999976655443333334565554 67 67777765 45567766543
Q ss_pred CccceecccCcccccceEEee-CCccCEEEEEEeCCE-EEEEecCCeEEEEeCCCceEeEeeeccccEEEEeecCCEEEE
Q 009373 230 VLPHLFDISGSEKQNTQFRLW-EHEGPITSLALDLTR-IYSGSWDMTVRVWDRALLKCLKVLRHSDWVYGLAPHDTTVAS 307 (536)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 307 (536)
.. ... .+. .+...+.+++++++. +++.+.++.+.+||+.+++......+...-..++|+|+.+++
T Consensus 100 ~g------------~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~ 166 (582)
T 3o4h_A 100 PG------------EEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAG 166 (582)
T ss_dssp TT------------CCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEE
T ss_pred CC------------ccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEE
Confidence 11 011 121 112225566667753 344444455559999998877666655544456699999997
Q ss_pred ec-C----CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCC--cEEEEEcccCccccccceeeeccCCC
Q 009373 308 TS-G----SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDG--AIHMYEIINDCTEANVLLVATWIPHT 380 (536)
Q Consensus 308 ~~-d----~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg--~i~iwd~~~~~~~~~~~~~~~~~~h~ 380 (536)
++ + ..|++||+.+++.. .+. .|.+.+..++|+|||+.|+++..+| .|++||+.++ ... .+.+|.
T Consensus 167 ~~~~~~~~~~i~~~d~~~g~~~-~l~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~------~~~-~~~~~~ 237 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNLSSGGLR-VFD-SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG------SVE-DLELPS 237 (582)
T ss_dssp EEEEETTEEEEEEEETTTCCCE-EEC-CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC------CEE-ECCCSC
T ss_pred EEEcCCCCeEEEEEcCCCCCce-Eee-cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC------cEE-EccCCC
Confidence 66 5 57999999988765 443 5888899999999999999888888 8999999887 333 566777
Q ss_pred CCeEEEE--------EcC--CeEEEEeCCCcEEEEEC
Q 009373 381 GPVNSLA--------FEF--PWLVSAAGDGKLSLIDV 407 (536)
Q Consensus 381 ~~v~~l~--------~~~--~~l~s~s~dg~i~vwd~ 407 (536)
..+..++ |+| .++++++.||.+++|++
T Consensus 238 ~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 238 KDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp SHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred cChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 7777777 976 58889999999999998
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=6e-18 Score=158.57 Aligned_cols=231 Identities=11% Similarity=0.033 Sum_probs=167.5
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCC-CceeeeeCCCC-ce--EEEEecCCCEEEEEe--CCCcEEE
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLED-GFSIASSKPLG-CT--IRAVAADKKLLVAGG--TDGFIHC 224 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~-~~~~~~~~~~~-~~--v~~~~~~~~~l~sg~--~dg~i~v 224 (536)
...+..|...|.+++|+|++++|++++ ++.|.+||+.+ ++.......+. .. ..+++|+++.|++++ .++...+
T Consensus 34 ~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l 112 (297)
T 2ojh_A 34 MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAI 112 (297)
T ss_dssp EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEE
T ss_pred eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceE
Confidence 446677999999999999999999987 78999999999 87766665553 33 367789999999998 4456666
Q ss_pred EEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEE-EEecCCeEEEEeC--CCceEeEeeeccccEEEEe
Q 009373 225 WRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIY-SGSWDMTVRVWDR--ALLKCLKVLRHSDWVYGLA 299 (536)
Q Consensus 225 wd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~-s~s~dg~i~iwd~--~~~~~~~~~~~~~~v~~~~ 299 (536)
|.+.... .....+..+ ..+..++| +++.|+ +++.|+.+++|++ .+++......+...+.++.
T Consensus 113 ~~~~~~~------------~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 179 (297)
T 2ojh_A 113 YLLPSTG------------GTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPD 179 (297)
T ss_dssp EEEETTC------------CCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEE
T ss_pred EEEECCC------------CceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccce
Confidence 6553211 012223333 34888888 667666 7889999999985 4455444444667777766
Q ss_pred --ecCCEEEEec--CCcEEEEeCC-CCcEEEEEccccccceEEEEEeCCCCEEEEEcCC-----------CcEEEEEccc
Q 009373 300 --PHDTTVASTS--GSDVYIWDTN-SGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGED-----------GAIHMYEIIN 363 (536)
Q Consensus 300 --~~~~~l~~~~--d~~i~i~d~~-~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~d-----------g~i~iwd~~~ 363 (536)
|+++.++.++ ++.+.+|++. .+.....+. .|...+..++|+|+|++|++++.+ +.|.+||+.+
T Consensus 180 ~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 180 YSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT-DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC-CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred ECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe-cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCC
Confidence 7888776554 7888999876 455555554 477889999999999999888776 5699999987
Q ss_pred CccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCC
Q 009373 364 DCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDG 400 (536)
Q Consensus 364 ~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg 400 (536)
+.. ..+..+.+|...+.+++|+| .+|++++.|.
T Consensus 259 ~~~----~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 259 GNV----ETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CSC----EEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCc----eeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 632 33445557888999999986 5777776653
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.80 E-value=2e-17 Score=159.54 Aligned_cols=258 Identities=12% Similarity=0.062 Sum_probs=180.4
Q ss_pred eEEEEecCCCEEEEEeC-------CCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEE-EEEec
Q 009373 202 TIRAVAADKKLLVAGGT-------DGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRI-YSGSW 271 (536)
Q Consensus 202 ~v~~~~~~~~~l~sg~~-------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l-~s~s~ 271 (536)
.-.+++++++.+++++. ++.|.+||..++. ....+. ....+..+++ +++.+ ++...
T Consensus 44 ~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~-------------~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~ 109 (353)
T 3vgz_A 44 YEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE-------------VTQAIH-NDLKPFGATINNTTQTLWFGNTV 109 (353)
T ss_dssp EEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCC-------------EEEEEE-ESSCCCSEEEETTTTEEEEEETT
T ss_pred cceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCe-------------EEEEEe-cCCCcceEEECCCCCEEEEEecC
Confidence 34567799998888774 5689999987763 222222 2233566777 66755 45566
Q ss_pred CCeEEEEeCCCceEeEeeeccc----------cEEEE--eecCCEEEEec---CCcEEEEeCCCCcEEEEEccccccceE
Q 009373 272 DMTVRVWDRALLKCLKVLRHSD----------WVYGL--APHDTTVASTS---GSDVYIWDTNSGCLLTVVNGAHVGNTK 336 (536)
Q Consensus 272 dg~i~iwd~~~~~~~~~~~~~~----------~v~~~--~~~~~~l~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~i~ 336 (536)
++.|.+||..+++.+..+.... .+.++ +++++.++++. ++.|.+||+.+++.+..+. .+...+.
T Consensus 110 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~ 188 (353)
T 3vgz_A 110 NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ-NTGKMST 188 (353)
T ss_dssp TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-CCCTTCC
T ss_pred CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-CCCCccc
Confidence 8999999999999888776321 14444 48888766654 6789999999999888875 2455688
Q ss_pred EEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeecc----CCCCCeEEEEEcC--CeEEEEeC-CCcEEEEECCc
Q 009373 337 SLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWI----PHTGPVNSLAFEF--PWLVSAAG-DGKLSLIDVRK 409 (536)
Q Consensus 337 ~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~----~h~~~v~~l~~~~--~~l~s~s~-dg~i~vwd~~~ 409 (536)
.++|+|+|+++++++.++.|.+||+.++. .+..+. ++...+.+++|+| +++++++. ++.|.+||+.+
T Consensus 189 ~~~~s~dg~~l~~~~~~~~i~~~d~~~~~------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 189 GLALDSEGKRLYTTNADGELITIDTADNK------ILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN 262 (353)
T ss_dssp CCEEETTTTEEEEECTTSEEEEEETTTTE------EEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred eEEECCCCCEEEEEcCCCeEEEEECCCCe------EEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 99999999999999999999999998873 333332 3566788899986 56666655 59999999987
Q ss_pred ccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC-EEEEecCCCeEEEEeCCchhhHHHHHHhhhcccchhHH
Q 009373 410 LLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD-RIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLENRM 488 (536)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~ 488 (536)
+.... .+.........++++++ .+++...++.|.+||..+++.+.....
T Consensus 263 ~~~~~-------------------~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~----------- 312 (353)
T 3vgz_A 263 GNILA-------------------KVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT----------- 312 (353)
T ss_dssp CCEEE-------------------EEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC-----------
T ss_pred CcEEE-------------------EEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec-----------
Confidence 42211 11111123356777777 556666899999999998765543211
Q ss_pred HhhhhccccccCCCCcceeEee
Q 009373 489 RRRKLQTEMSSKGGRTDQCSVA 510 (536)
Q Consensus 489 ~~~~~~~~~~~~g~~~~~~~~~ 510 (536)
......++|+|+|+.+.+....
T Consensus 313 ~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 313 PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp CSEEEEEEECTTSCEEEEEEEC
T ss_pred CCCCCeEEEcCCCCEEEEEEcc
Confidence 1235789999999988776554
No 143
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.80 E-value=1.3e-17 Score=165.16 Aligned_cols=215 Identities=19% Similarity=0.222 Sum_probs=146.3
Q ss_pred CcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccc----cceEEeeCCccC
Q 009373 180 SIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQ----NTQFRLWEHEGP 255 (536)
Q Consensus 180 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~----~~~~~~~~h~~~ 255 (536)
+.+++|+.... +.......+++++++.++++|+.+| +++|+....... ........ ........+.+.
T Consensus 23 ~~vri~~~~~~-----~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPEE-----LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQ--NKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCSS-----CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCC--CCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCccc-----cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhh--cccccCcccccccCccccccCCCc
Confidence 45777664311 2233456677778888888888777 777775432100 00000000 001112246778
Q ss_pred EEEEEE--eCCEEE----EEecCCeEEEEeCCCc--------eE---eEeee-ccccEEEEe--ec-CCEEEEec-CCcE
Q 009373 256 ITSLAL--DLTRIY----SGSWDMTVRVWDRALL--------KC---LKVLR-HSDWVYGLA--PH-DTTVASTS-GSDV 313 (536)
Q Consensus 256 v~~l~~--~~~~l~----s~s~dg~i~iwd~~~~--------~~---~~~~~-~~~~v~~~~--~~-~~~l~~~~-d~~i 313 (536)
|.+++| ++++|+ +|+.|++|++||+.++ +. ...+. |...|.+++ |+ +.++++++ |++|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 999999 678888 7889999999998765 22 23333 789999998 55 67888887 9999
Q ss_pred EEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeecc-------CCCCCeEEE
Q 009373 314 YIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWI-------PHTGPVNSL 386 (536)
Q Consensus 314 ~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~-------~h~~~v~~l 386 (536)
++||++++..+.... +|...|++++|+|+|++|++|+.||.|++||++ +. ....+. .|...|.++
T Consensus 175 ~iwD~~~~~~~~~~~-~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~------~~~~~~~~~~~~~~~~~~v~~v 246 (434)
T 2oit_A 175 AVLQVTETVKVCATL-PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ------EKKVIPCPPFYESDHPVRVLDV 246 (434)
T ss_dssp EEEEESSSEEEEEEE-CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC------EEEEECCCTTCCTTSCEEEEEE
T ss_pred EEEEcCCCcceeecc-CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc------ccccccCCcccCCCCceeEEEE
Confidence 999999987665553 588999999999999999999999999999998 31 112221 244589999
Q ss_pred EEcCC--eEE-EEeCCCc------EEEEECCcc
Q 009373 387 AFEFP--WLV-SAAGDGK------LSLIDVRKL 410 (536)
Q Consensus 387 ~~~~~--~l~-s~s~dg~------i~vwd~~~~ 410 (536)
+|+++ +++ .++.||. +++|++++.
T Consensus 247 ~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 247 LWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 99863 332 2444543 899999864
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.79 E-value=2.5e-17 Score=175.58 Aligned_cols=228 Identities=11% Similarity=-0.013 Sum_probs=165.7
Q ss_pred cEEEEEEecCCCEEEEEeCCCcEEEEECCCCc--eeeeeCCCCceE--EEEecCCCEEEEEeCCCcEEEEEcccCcccee
Q 009373 160 AVLTVFVLASAKLLFTSGYDSIVRMWHLEDGF--SIASSKPLGCTI--RAVAADKKLLVAGGTDGFIHCWRAVEVLPHLF 235 (536)
Q Consensus 160 ~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~--~~~~~~~~~~~v--~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 235 (536)
.|.+++|+|||++|++++. +.|.+||+.++. ....+..+...+ .+++|||+.|+.++ ++.|++||+.++....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~- 186 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQ- 186 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE-
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEE-
Confidence 4889999999999999986 999999999883 344555555444 45679999999887 4699999997763211
Q ss_pred cccCcccccceEEeeCCcc----------------CEEEEEE--eCCEEEEEecCC------------------------
Q 009373 236 DISGSEKQNTQFRLWEHEG----------------PITSLAL--DLTRIYSGSWDM------------------------ 273 (536)
Q Consensus 236 ~~~~~~~~~~~~~~~~h~~----------------~v~~l~~--~~~~l~s~s~dg------------------------ 273 (536)
....+.. .+.+++| |+++|++++.|+
T Consensus 187 ------------~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~ 254 (741)
T 2ecf_A 187 ------------LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYP 254 (741)
T ss_dssp ------------CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECC
T ss_pred ------------eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecC
Confidence 1111111 2467788 788899888776
Q ss_pred ---------eEEEEeCCC-ceEeEee---eccccEEEEe-ecCCEEEEec------CCcEEEEeCCCCcEEEEEcccccc
Q 009373 274 ---------TVRVWDRAL-LKCLKVL---RHSDWVYGLA-PHDTTVASTS------GSDVYIWDTNSGCLLTVVNGAHVG 333 (536)
Q Consensus 274 ---------~i~iwd~~~-~~~~~~~---~~~~~v~~~~-~~~~~l~~~~------d~~i~i~d~~~~~~~~~~~~~~~~ 333 (536)
.|.+||+.+ ++..... .+...+..++ |+|+.|+.+. +..|.+||+.+++....+.. +..
T Consensus 255 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~ 333 (741)
T 2ecf_A 255 AAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE-TSP 333 (741)
T ss_dssp BTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE-ECS
T ss_pred CCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc-CCC
Confidence 889999988 7765443 2445555433 9999888654 35699999999987776642 332
Q ss_pred ----ceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEE-EEcC--CeEE-EEeCCC--cEE
Q 009373 334 ----NTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSL-AFEF--PWLV-SAAGDG--KLS 403 (536)
Q Consensus 334 ----~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l-~~~~--~~l~-s~s~dg--~i~ 403 (536)
.+..++|+|+|+++++++.||.++||.+.... . ...+..|...|..+ .|+| +.|+ +++.++ .++
T Consensus 334 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~-----~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~ 407 (741)
T 2ecf_A 334 TWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKG-----K-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQ 407 (741)
T ss_dssp SCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSS-----C-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBE
T ss_pred CcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCC-----C-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEE
Confidence 45688999999999999999999999886431 3 55667788888887 5876 4554 555555 899
Q ss_pred EEECCc
Q 009373 404 LIDVRK 409 (536)
Q Consensus 404 vwd~~~ 409 (536)
||++..
T Consensus 408 l~~~~~ 413 (741)
T 2ecf_A 408 IYAVPL 413 (741)
T ss_dssp EEEEET
T ss_pred EEEEEc
Confidence 999864
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.79 E-value=2.8e-17 Score=157.14 Aligned_cols=241 Identities=9% Similarity=0.040 Sum_probs=164.5
Q ss_pred cceeeeeCccccEEEEEEecCCCEEEEEeC-CCcEEEEECCCCce-eeeeCCCCceE--EEEecCCCEEEEEeCCC---c
Q 009373 149 YSIDVLYGHTEAVLTVFVLASAKLLFTSGY-DSIVRMWHLEDGFS-IASSKPLGCTI--RAVAADKKLLVAGGTDG---F 221 (536)
Q Consensus 149 ~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~-dg~v~iwd~~~~~~-~~~~~~~~~~v--~~~~~~~~~l~sg~~dg---~ 221 (536)
.....+..+...+ +++|+|+++++++++. ++.|.+||+.+++. ...+..+..+. .+++|++++++++..++ .
T Consensus 31 ~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 109 (331)
T 3u4y_A 31 EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFN 109 (331)
T ss_dssp CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCE
T ss_pred ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCccc
Confidence 3455666666777 9999999997666665 89999999999887 66555444433 47789999999666553 8
Q ss_pred EEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEE-EecCCe-EEEEeCCCceEe-----Eeeecc
Q 009373 222 IHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYS-GSWDMT-VRVWDRALLKCL-----KVLRHS 292 (536)
Q Consensus 222 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s-~s~dg~-i~iwd~~~~~~~-----~~~~~~ 292 (536)
|.+||+.++. ....+. +.....+++| +++++++ ...++. |.+|++.....+ ..+...
T Consensus 110 i~v~d~~~~~-------------~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 175 (331)
T 3u4y_A 110 MQSYSFLKNK-------------FISTIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGG 175 (331)
T ss_dssp EEEEETTTTE-------------EEEEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSS
T ss_pred EEEEECCCCC-------------eEEEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCC
Confidence 9999997653 222232 3345688899 5555554 455588 999998754332 222233
Q ss_pred ccEEEEe--ecCCEEEEe-c-CCcEEEEeCCCCcE---EEEEccccccceEEEEEeCCCCEEEEEc-CCCcEEEEEcccC
Q 009373 293 DWVYGLA--PHDTTVAST-S-GSDVYIWDTNSGCL---LTVVNGAHVGNTKSLARSHTGDFLFTGG-EDGAIHMYEIIND 364 (536)
Q Consensus 293 ~~v~~~~--~~~~~l~~~-~-d~~i~i~d~~~~~~---~~~~~~~~~~~i~~l~~~~~~~~l~tg~-~dg~i~iwd~~~~ 364 (536)
.....+. |++++++++ . ++.|.+||+.+++. +..+. ....+..++|+|+|+++++++ .++.|.+||+.++
T Consensus 176 ~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 176 TRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred CCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 3445544 889865544 4 78999999999987 77664 446778999999999776654 5788999999887
Q ss_pred ccccccceeeeccCC----C---CCeEEEEEcC--CeEEEEe-CCCcEEEEECCcc
Q 009373 365 CTEANVLLVATWIPH----T---GPVNSLAFEF--PWLVSAA-GDGKLSLIDVRKL 410 (536)
Q Consensus 365 ~~~~~~~~~~~~~~h----~---~~v~~l~~~~--~~l~s~s-~dg~i~vwd~~~~ 410 (536)
... .+..+..+ . .....++|+| .+|++++ .++.|.+||+...
T Consensus 254 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 254 TLS----FVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp EEE----EEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred cee----eecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 321 12221111 1 2235688976 5665555 5679999999763
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=1.4e-17 Score=156.01 Aligned_cols=248 Identities=12% Similarity=0.039 Sum_probs=169.0
Q ss_pred EEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCC-ceEeEeee-
Q 009373 215 AGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRAL-LKCLKVLR- 290 (536)
Q Consensus 215 sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~- 290 (536)
.++.|++|++||+.++. ...+..|...|.+++| ++++|++++ ++.|.+||+.+ ++......
T Consensus 17 ~~~~~~~i~~~d~~~~~--------------~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~ 81 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRK--------------MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTG 81 (297)
T ss_dssp -CCCCEEEEEEETTTTE--------------EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCT
T ss_pred CCCcceeEEEEeCCCCc--------------eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccc
Confidence 35678999999987652 3345568889999999 678888876 88999999998 77766554
Q ss_pred c-cccEEE--EeecCCEEEEec-C----CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEE-EEcCCCcEEEEEc
Q 009373 291 H-SDWVYG--LAPHDTTVASTS-G----SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLF-TGGEDGAIHMYEI 361 (536)
Q Consensus 291 ~-~~~v~~--~~~~~~~l~~~~-d----~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~-tg~~dg~i~iwd~ 361 (536)
+ ...+.+ ++|+++.++++. + ..|..+++.+++ ...+. +...+..++|+|+++.|+ +++.++.+++|++
T Consensus 82 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~ 158 (297)
T 2ojh_A 82 FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT--KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSM 158 (297)
T ss_dssp TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC--SSSSEEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred cccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee--cCCCccceEECCCCCEEEEEECCCCceEEEEE
Confidence 2 245544 458999888877 2 345556666655 33342 333588999999999877 7888999999997
Q ss_pred ccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEe-CCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccc
Q 009373 362 INDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAA-GDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGF 438 (536)
Q Consensus 362 ~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (536)
.... .....+..|...+.+++|+| .+|+.++ .++.+.+|++.... .....+..+
T Consensus 159 ~~~~-----~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~------------------~~~~~~~~~ 215 (297)
T 2ojh_A 159 DIDS-----GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG------------------SSVERITDS 215 (297)
T ss_dssp ETTT-----CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS------------------SCEEECCCC
T ss_pred ECCC-----CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC------------------CCcEEEecC
Confidence 5432 23455667888999999986 5666655 58999999986311 111223334
Q ss_pred cccEEEEE--ecCCEEEEecCC-----------CeEEEEeCCchhhHHHHHHhhhcccchhHHHhhhhccccccCCCCcc
Q 009373 439 ECNLLSVD--IGADRIVCGGEE-----------GIVRIWNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSSKGGRTD 505 (536)
Q Consensus 439 ~~~v~~~~--~~~~~l~sg~~D-----------g~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 505 (536)
...+..+. +++++|++++.+ +.|++||+.+++.... ............+.|+|+|..++
T Consensus 216 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~--------~~~~~~~~~~~~~~~spdg~~l~ 287 (297)
T 2ojh_A 216 AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETL--------FDLFGGQGTMNSPNWSPDGDEFA 287 (297)
T ss_dssp SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEE--------EEEEESTTTSCSCCBCTTSSEEE
T ss_pred CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceee--------eccCCCCcccccceECCCCCEEE
Confidence 44455555 455688877765 5699999987643210 00001123456799999999999
Q ss_pred eeEeec
Q 009373 506 QCSVAA 511 (536)
Q Consensus 506 ~~~~~~ 511 (536)
+++.+.
T Consensus 288 ~~~~~~ 293 (297)
T 2ojh_A 288 YVRYFP 293 (297)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 886653
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.79 E-value=7.4e-17 Score=154.79 Aligned_cols=241 Identities=12% Similarity=0.132 Sum_probs=163.0
Q ss_pred eeCccccEEEEEEecCCCEEEEEeCC-CcEEEEECC--CCc--eeeeeCCC-CceEEEEecCCCEEEEEeC-CCcEEEEE
Q 009373 154 LYGHTEAVLTVFVLASAKLLFTSGYD-SIVRMWHLE--DGF--SIASSKPL-GCTIRAVAADKKLLVAGGT-DGFIHCWR 226 (536)
Q Consensus 154 l~~h~~~V~~v~~~~~~~~l~sgs~d-g~v~iwd~~--~~~--~~~~~~~~-~~~v~~~~~~~~~l~sg~~-dg~i~vwd 226 (536)
...|...+.+++|+|++++|++++.+ +.|.+|++. +++ .+..+..+ .....+++++++.+++++. ++.|.+||
T Consensus 33 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 33 VVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp EEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred eEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 34577889999999999999988886 999999997 554 33344322 3445677899998876665 88999999
Q ss_pred cccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEe-cCCeEEEEeCCC-ceEeEe----ee--ccccEE
Q 009373 227 AVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGS-WDMTVRVWDRAL-LKCLKV----LR--HSDWVY 296 (536)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s-~dg~i~iwd~~~-~~~~~~----~~--~~~~v~ 296 (536)
+..+. .......+. ....+.+++| +++.+++++ .++.|.+||+.+ ++.... +. ....+.
T Consensus 113 ~~~~~----------~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
T 1ri6_A 113 LEDGL----------PVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPR 181 (343)
T ss_dssp EETTE----------EEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEE
T ss_pred CCCCc----------ccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcc
Confidence 84221 011222232 3345778888 567787777 899999999987 654322 22 333555
Q ss_pred EEe--ecCCEEEEec--CCcEEEEeCCC--CcE--EEEEc---ccc--ccceEEEEEeCCCCEEE-EEcCCCcEEEEEcc
Q 009373 297 GLA--PHDTTVASTS--GSDVYIWDTNS--GCL--LTVVN---GAH--VGNTKSLARSHTGDFLF-TGGEDGAIHMYEII 362 (536)
Q Consensus 297 ~~~--~~~~~l~~~~--d~~i~i~d~~~--~~~--~~~~~---~~~--~~~i~~l~~~~~~~~l~-tg~~dg~i~iwd~~ 362 (536)
.+. |+++++++++ ++.|.+||+.. ++. ...+. .++ ...+..++|+|+|++|+ ++..++.|.+||+.
T Consensus 182 ~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 182 HMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 554 8888665443 78999999954 432 22221 111 23577899999998777 55579999999998
Q ss_pred cCccccccceeeeccCCCCCeEEEEEcC--CeEEEEe-CCCcEEEEECC
Q 009373 363 NDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAA-GDGKLSLIDVR 408 (536)
Q Consensus 363 ~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s-~dg~i~vwd~~ 408 (536)
... .....+..+..+.. +.+++|+| ++|++++ .++.|.+|++.
T Consensus 262 ~~~--~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 262 EDG--SVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TTS--CCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCC--CceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 321 11133444444444 88999986 5777777 68999999664
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.78 E-value=3.4e-18 Score=181.22 Aligned_cols=294 Identities=13% Similarity=0.063 Sum_probs=187.0
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEEECCCCcee-eeeCCC-------------------CceEEEEecCCCEEEEEeCCC
Q 009373 161 VLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSI-ASSKPL-------------------GCTIRAVAADKKLLVAGGTDG 220 (536)
Q Consensus 161 V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~-~~~~~~-------------------~~~v~~~~~~~~~l~sg~~dg 220 (536)
+..+.|. +..+++++.|+ | +||+.+++.+ ..+..+ .....+++|+ +.++.+ .++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECC
Confidence 3446777 66777778888 8 9999999773 332221 2344556788 555555 459
Q ss_pred cEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCC-----ceEeEeee-cc
Q 009373 221 FIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRAL-----LKCLKVLR-HS 292 (536)
Q Consensus 221 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~-----~~~~~~~~-~~ 292 (536)
.|++||+.++. ...+..+...+.+++| +++.|+++ .|+.|++||+.+ ++...... +.
T Consensus 102 ~i~~~d~~~~~--------------~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~ 166 (706)
T 2z3z_A 102 GLVGFDMLARK--------------VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGT 166 (706)
T ss_dssp EEEEEETTTTE--------------EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCB
T ss_pred EEEEEECCCCc--------------eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCC
Confidence 99999997652 2334456677888888 77888884 789999999988 77665443 22
Q ss_pred c----------------cEEEEeecCCEEEEec----------------------------------CCcEEEEeCCCCc
Q 009373 293 D----------------WVYGLAPHDTTVASTS----------------------------------GSDVYIWDTNSGC 322 (536)
Q Consensus 293 ~----------------~v~~~~~~~~~l~~~~----------------------------------d~~i~i~d~~~~~ 322 (536)
. .-..++|+|+.|+.++ +..|.+||+.+++
T Consensus 167 ~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~ 246 (706)
T 2z3z_A 167 ETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK 246 (706)
T ss_dssp TTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE
T ss_pred CCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc
Confidence 2 2234559999988875 2569999999987
Q ss_pred EEEEEcc-ccccceEEEEEeCCCCEEEEEcCCC-----cEEEEEcccCccccccceeeeccCCC---CCeEEEEEcC---
Q 009373 323 LLTVVNG-AHVGNTKSLARSHTGDFLFTGGEDG-----AIHMYEIINDCTEANVLLVATWIPHT---GPVNSLAFEF--- 390 (536)
Q Consensus 323 ~~~~~~~-~~~~~i~~l~~~~~~~~l~tg~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~h~---~~v~~l~~~~--- 390 (536)
....... .|...+.+++|+|+|++|++++.++ .|++||+.++... ..+.. ..+. ..+.+++|+|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~---~~~~~-~~~~~~~~~~~~~~~sp~~d 322 (706)
T 2z3z_A 247 TVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV---RTLFV-ETDKHYVEPLHPLTFLPGSN 322 (706)
T ss_dssp EEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE---EEEEE-EECSSCCCCCSCCEECTTCS
T ss_pred eEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee---eEEEE-ccCCCeECccCCceeecCCC
Confidence 6544322 4667899999999999999887775 8999999877211 11111 1122 2346788876
Q ss_pred -CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccE---EEEEecCCEE-EEecCCC----eE
Q 009373 391 -PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNL---LSVDIGADRI-VCGGEEG----IV 461 (536)
Q Consensus 391 -~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~~~~~~l-~sg~~Dg----~i 461 (536)
.++++++.||.++||++... ......+..+...+ ..++++++.| ++++.++ .|
T Consensus 323 g~~l~~~~~~g~~~l~~~~~~------------------~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l 384 (706)
T 2z3z_A 323 NQFIWQSRRDGWNHLYLYDTT------------------GRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHF 384 (706)
T ss_dssp SEEEEEECTTSSCEEEEEETT------------------SCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEE
T ss_pred CEEEEEEccCCccEEEEEECC------------------CCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEE
Confidence 48888889999999987621 01111222333334 3455566655 4555555 67
Q ss_pred EEEeCCchhhHHHHHHhhhcccchhHHHhhhhccccccCCCCcceeEe
Q 009373 462 RIWNFSQAFEIERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQCSV 509 (536)
Q Consensus 462 ~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 509 (536)
..|++.++.. .... . ......++|+|||+.++....
T Consensus 385 ~~~d~~~~~~-~~l~-------~----~~~~~~~~~spdg~~l~~~~~ 420 (706)
T 2z3z_A 385 YCIDIKGGKT-KDLT-------P----ESGMHRTQLSPDGSAIIDIFQ 420 (706)
T ss_dssp EEEETTCCCC-EESC-------C----SSSEEEEEECTTSSEEEEEEE
T ss_pred EEEEcCCCCc-eecc-------C----CCceEEEEECCCCCEEEEEec
Confidence 7777766531 1110 0 112457899999999887544
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.78 E-value=2.7e-17 Score=157.39 Aligned_cols=226 Identities=13% Similarity=0.022 Sum_probs=165.8
Q ss_pred cEEEEEEecCCCEE-EEEeCCCcEEEEECCCCceeeeeCC-C------CceEEEEecCCCEEEEEe------------CC
Q 009373 160 AVLTVFVLASAKLL-FTSGYDSIVRMWHLEDGFSIASSKP-L------GCTIRAVAADKKLLVAGG------------TD 219 (536)
Q Consensus 160 ~V~~v~~~~~~~~l-~sgs~dg~v~iwd~~~~~~~~~~~~-~------~~~v~~~~~~~~~l~sg~------------~d 219 (536)
.+..++|+|+++.+ ++++.++.|.+||+.+++.+..+.. + .....+++++++.+++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 47889999999765 5566689999999999988776643 2 233467789999998886 57
Q ss_pred CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeeeccc--cE
Q 009373 220 GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLRHSD--WV 295 (536)
Q Consensus 220 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~--~v 295 (536)
+.|.+||+.++. ....+.. ...+.+++| ++++++++ ++.|.+||+.+++....+.... ..
T Consensus 115 ~~i~v~d~~~~~-------------~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~ 178 (337)
T 1pby_B 115 TRVALYDAETLS-------------RRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAE 178 (337)
T ss_dssp CEEEEEETTTTE-------------EEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTT
T ss_pred ceEEEEECCCCc-------------EEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCC
Confidence 999999997653 2222222 345667778 66777777 6899999999998887766222 22
Q ss_pred EEEeecCCEEEEec--CC-----------------------cEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEE
Q 009373 296 YGLAPHDTTVASTS--GS-----------------------DVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTG 350 (536)
Q Consensus 296 ~~~~~~~~~l~~~~--d~-----------------------~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg 350 (536)
..+.|++..++... ++ .|.+||+.+++....-...+...+.+++|+|+|++++++
T Consensus 179 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 258 (337)
T 1pby_B 179 TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA 258 (337)
T ss_dssp TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe
Confidence 25567777655444 22 478999999887522223456678899999999999988
Q ss_pred cCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcc
Q 009373 351 GEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 351 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~ 410 (536)
++.|.+||+.++ ..+..+.. ...+.+++|+| ++|++++.++.|.+||+.++
T Consensus 259 --~~~v~~~d~~~~------~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 259 --YNVLESFDLEKN------ASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp --ESEEEEEETTTT------EEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred --CCeEEEEECCCC------cCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 799999999887 33444332 34678999986 68888889999999999875
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.78 E-value=4.5e-17 Score=156.75 Aligned_cols=261 Identities=14% Similarity=0.092 Sum_probs=171.7
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCC---ceEEEEecCCCEEE-EEeCCCcEEEEEcccCccceeccc
Q 009373 163 TVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLG---CTIRAVAADKKLLV-AGGTDGFIHCWRAVEVLPHLFDIS 238 (536)
Q Consensus 163 ~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~---~~v~~~~~~~~~l~-sg~~dg~i~vwd~~~~~~~~~~~~ 238 (536)
.+++++++.++++++.+++|.+||+.+++.+..+..+. ..-.+++++++.++ ++..++.|.+||+.++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~------- 76 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK------- 76 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE-------
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc-------
Confidence 45678888999999999999999999998887775443 44567789998654 55678999999997753
Q ss_pred CcccccceEEee-CC-----ccCEEEEEE--eCCEEEEEecC------------CeEEEEeCCCceE---eEeeeccccE
Q 009373 239 GSEKQNTQFRLW-EH-----EGPITSLAL--DLTRIYSGSWD------------MTVRVWDRALLKC---LKVLRHSDWV 295 (536)
Q Consensus 239 ~~~~~~~~~~~~-~h-----~~~v~~l~~--~~~~l~s~s~d------------g~i~iwd~~~~~~---~~~~~~~~~v 295 (536)
....+. .+ ...+..++| +++++++++.+ +.|.+||+.+++. +..+.+...+
T Consensus 77 ------~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 150 (349)
T 1jmx_B 77 ------NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQV 150 (349)
T ss_dssp ------EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSC
T ss_pred ------EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcc
Confidence 122222 11 223667788 67788888865 9999999988543 3344444455
Q ss_pred EEE--eecCCEEEEecCCcEEEEeCCCCcEEEEEcccccc-----------------------ceEEEEEeCCCC-----
Q 009373 296 YGL--APHDTTVASTSGSDVYIWDTNSGCLLTVVNGAHVG-----------------------NTKSLARSHTGD----- 345 (536)
Q Consensus 296 ~~~--~~~~~~l~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----------------------~i~~l~~~~~~~----- 345 (536)
.++ +++++ ++++ ++.|.+||+.+++....+..+... ....+++++++.
T Consensus 151 ~~~~~s~dg~-l~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 228 (349)
T 1jmx_B 151 YLMRAADDGS-LYVA-GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT 228 (349)
T ss_dssp CCEEECTTSC-EEEE-SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC
T ss_pred cceeECCCCc-EEEc-cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc
Confidence 554 48888 4444 445999999999988777532200 344566665542
Q ss_pred ------EEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC---CeEEEEeCCCcEEEEECCcccccCCC
Q 009373 346 ------FLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF---PWLVSAAGDGKLSLIDVRKLLRSGRP 416 (536)
Q Consensus 346 ------~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~ 416 (536)
++.....++.+++|++. .+...+.+++|+| ++++++ ++.|.+||+.+......
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~- 290 (349)
T 1jmx_B 229 ADLLYGYLSVDLKTGKTHTQEFA---------------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKA- 290 (349)
T ss_dssp CEEEEEEEEEETTTCCEEEEEEE---------------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEE-
T ss_pred cccceeEEEEeccCCcEEecccc---------------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEE-
Confidence 12233344455555442 2455678888876 467766 88999999987432110
Q ss_pred CCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEEEeCCchhhHH
Q 009373 417 TSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFEIE 473 (536)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~~ 473 (536)
...++.....++++++++|++++.++.|++||..+++.+.
T Consensus 291 -----------------~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~ 330 (349)
T 1jmx_B 291 -----------------ANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVK 330 (349)
T ss_dssp -----------------EECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEE
T ss_pred -----------------EcCCCCccceEECCCCCEEEEecCCCeEEEEeccccceee
Confidence 0112223344556666778888889999999998876543
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.77 E-value=2.3e-16 Score=167.69 Aligned_cols=249 Identities=10% Similarity=-0.042 Sum_probs=166.0
Q ss_pred cccCCccceeeeeCccc---cEEEEEEecCCCEEEEEeCC---------CcEEEEECCCCceeeee---CCCCc--eEEE
Q 009373 143 KTFLGRYSIDVLYGHTE---AVLTVFVLASAKLLFTSGYD---------SIVRMWHLEDGFSIASS---KPLGC--TIRA 205 (536)
Q Consensus 143 ~~~~~~~~~~~l~~h~~---~V~~v~~~~~~~~l~sgs~d---------g~v~iwd~~~~~~~~~~---~~~~~--~v~~ 205 (536)
+...+......+.+|.. .|.+++|+|||++|++++.+ +.+.+||+.+++. ..+ ..+.. ...+
T Consensus 42 ~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~ 120 (723)
T 1xfd_A 42 WNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAG 120 (723)
T ss_dssp BCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCC
T ss_pred EECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccE
Confidence 33333344566677765 49999999999999999875 7888999998876 223 23332 3356
Q ss_pred EecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCcc------------------CEEEEEE--eCCE
Q 009373 206 VAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEG------------------PITSLAL--DLTR 265 (536)
Q Consensus 206 ~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~------------------~v~~l~~--~~~~ 265 (536)
++|||+.|+.++. +.|++||+.++... .....+.. .+.+++| |++.
T Consensus 121 ~SPdG~~la~~~~-~~i~~~~~~~g~~~-------------~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~ 186 (723)
T 1xfd_A 121 WGPKGQQLIFIFE-NNIYYCAHVGKQAI-------------RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR 186 (723)
T ss_dssp BCSSTTCEEEEET-TEEEEESSSSSCCE-------------EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE
T ss_pred ECCCCCEEEEEEC-CeEEEEECCCCceE-------------EEecCCCCCceECcccceeEEEEeccCcceEEECCCCCE
Confidence 7899999999886 79999999876421 11112222 2378888 7788
Q ss_pred EEEEecCC----------------------------------eEEEEeCCCceEeEeee-c------cccEEEEe--ecC
Q 009373 266 IYSGSWDM----------------------------------TVRVWDRALLKCLKVLR-H------SDWVYGLA--PHD 302 (536)
Q Consensus 266 l~s~s~dg----------------------------------~i~iwd~~~~~~~~~~~-~------~~~v~~~~--~~~ 302 (536)
|++++.|+ .|++||+.+++....+. + ...+..++ |+|
T Consensus 187 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg 266 (723)
T 1xfd_A 187 LAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATST 266 (723)
T ss_dssp EEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSS
T ss_pred EEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCC
Confidence 98887653 79999999887645544 2 45566555 899
Q ss_pred CEEEEec-C----CcEEEEeCCCCcEEEEEccccccce----EEEEEeCCCCEEEE--EcCCC------cEEEEEcccCc
Q 009373 303 TTVASTS-G----SDVYIWDTNSGCLLTVVNGAHVGNT----KSLARSHTGDFLFT--GGEDG------AIHMYEIINDC 365 (536)
Q Consensus 303 ~~l~~~~-d----~~i~i~d~~~~~~~~~~~~~~~~~i----~~l~~~~~~~~l~t--g~~dg------~i~iwd~~~~~ 365 (536)
++++... . ..|.+||+.+++....+...+...+ ..++|+|+|+.|+. +..++ .|.+||+....
T Consensus 267 ~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~ 346 (723)
T 1xfd_A 267 KVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNS 346 (723)
T ss_dssp EEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCS
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCC
Confidence 9887654 2 4699999999987766543344443 37899999997764 45677 45566632321
Q ss_pred cccccceeeeccCCCCCeEE-EEEcC--CeEEEEeCC---CcEEEEECCc
Q 009373 366 TEANVLLVATWIPHTGPVNS-LAFEF--PWLVSAAGD---GKLSLIDVRK 409 (536)
Q Consensus 366 ~~~~~~~~~~~~~h~~~v~~-l~~~~--~~l~s~s~d---g~i~vwd~~~ 409 (536)
.. .+...+..+...+.. ++|+| +.|+..+.+ +.+++|++..
T Consensus 347 ~~---~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 347 SN---DNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp SS---CCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred Cc---cceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 10 013334433444544 68976 577666554 7899999864
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.76 E-value=6.3e-16 Score=148.81 Aligned_cols=242 Identities=12% Similarity=0.118 Sum_probs=161.4
Q ss_pred eeeCccccEEEEEEecCCCEEEEEeC---CCcEEEEECCCCc--eeeeeC--CCCceEEEEecCCCEEEEEe-CCCcEEE
Q 009373 153 VLYGHTEAVLTVFVLASAKLLFTSGY---DSIVRMWHLEDGF--SIASSK--PLGCTIRAVAADKKLLVAGG-TDGFIHC 224 (536)
Q Consensus 153 ~l~~h~~~V~~v~~~~~~~~l~sgs~---dg~v~iwd~~~~~--~~~~~~--~~~~~v~~~~~~~~~l~sg~-~dg~i~v 224 (536)
....+...+..++|+|+|+ |++++. ++.|.+|++.++. .+..+. .....-.+++|++++|++++ .++.|.+
T Consensus 34 ~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v 112 (347)
T 3hfq_A 34 GLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEV 112 (347)
T ss_dssp EEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEE
T ss_pred eeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEE
Confidence 4455667788899999999 555544 6899999997765 333322 23334567889999888887 7899999
Q ss_pred EEcccCccceecccCcccccceEEee---------CCccCEEEEEE--eCCEEEEEecCCeEEEEeCC-CceEeEe--ee
Q 009373 225 WRAVEVLPHLFDISGSEKQNTQFRLW---------EHEGPITSLAL--DLTRIYSGSWDMTVRVWDRA-LLKCLKV--LR 290 (536)
Q Consensus 225 wd~~~~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~-~~~~~~~--~~ 290 (536)
|++..... ......+. .+...+.+++| +++.+++...++.|.+||+. +++.... +.
T Consensus 113 ~~~~~~g~----------~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~ 182 (347)
T 3hfq_A 113 MKIAADGA----------LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLT 182 (347)
T ss_dssp EEECTTSC----------EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEE
T ss_pred EEeCCCCC----------eeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEE
Confidence 99853210 11111111 12345888899 66766666678999999998 5543322 22
Q ss_pred --ccccEEE--EeecCCEEEEec--CCcEEEEeCCC--CcE--EEEEcccc-----ccceEEEEEeCCCCEE-EEEcCCC
Q 009373 291 --HSDWVYG--LAPHDTTVASTS--GSDVYIWDTNS--GCL--LTVVNGAH-----VGNTKSLARSHTGDFL-FTGGEDG 354 (536)
Q Consensus 291 --~~~~v~~--~~~~~~~l~~~~--d~~i~i~d~~~--~~~--~~~~~~~~-----~~~i~~l~~~~~~~~l-~tg~~dg 354 (536)
....+.. ++|++++++++. ++.|.+|++.. ++. +..+.... ...+..++|+|+|++| +++..++
T Consensus 183 ~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~ 262 (347)
T 3hfq_A 183 MEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN 262 (347)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT
T ss_pred cCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC
Confidence 2223444 448999666644 68899999874 543 22222111 1458899999999977 5556689
Q ss_pred cEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCC-CcEEEEECC
Q 009373 355 AIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGD-GKLSLIDVR 408 (536)
Q Consensus 355 ~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~d-g~i~vwd~~ 408 (536)
.|.+|++.... ....+..+..+...+..++|+| ++|++++.+ +.|.+|++.
T Consensus 263 ~v~v~~~~~~g---~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 263 TLAVFAVTADG---HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEEECGGG---CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEECCCC---cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 99999997431 2245556666677789999986 578777764 899999654
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.75 E-value=1.5e-15 Score=146.09 Aligned_cols=259 Identities=14% Similarity=0.106 Sum_probs=157.5
Q ss_pred CCcEEEEECC--CCceee--ee-CCCCceEEEEecCCCEEEEEeC---CCcEEEEEcccCccceecccCcccccceEEee
Q 009373 179 DSIVRMWHLE--DGFSIA--SS-KPLGCTIRAVAADKKLLVAGGT---DGFIHCWRAVEVLPHLFDISGSEKQNTQFRLW 250 (536)
Q Consensus 179 dg~v~iwd~~--~~~~~~--~~-~~~~~~v~~~~~~~~~l~sg~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 250 (536)
++.|.+|+++ +++... .. ........+++|+++ |++++. ++.|.+|++.++. ......+.
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~-----------~~~~~~~~ 82 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQT-----------AHKLNTVV 82 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTE-----------EEEEEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCc-----------EEEeeeee
Confidence 4567777654 454322 12 122334467889999 555554 6899999996553 12233334
Q ss_pred CCccCEEEEEE--eCCEEEEEe-cCCeEEEEeCCC-c--eEeEeeecc----------ccEEEE--eecCCEEEEec-CC
Q 009373 251 EHEGPITSLAL--DLTRIYSGS-WDMTVRVWDRAL-L--KCLKVLRHS----------DWVYGL--APHDTTVASTS-GS 311 (536)
Q Consensus 251 ~h~~~v~~l~~--~~~~l~s~s-~dg~i~iwd~~~-~--~~~~~~~~~----------~~v~~~--~~~~~~l~~~~-d~ 311 (536)
.+...+..++| ++++|++++ .++.|.+||+.. + +.+..+.+. ..+.++ +|+++++++.. ++
T Consensus 83 ~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~ 162 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSD 162 (347)
T ss_dssp EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTT
T ss_pred cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCC
Confidence 56677788888 677888887 789999999962 2 333333321 124444 48899666655 68
Q ss_pred cEEEEeCC-CCcEEE--EEccccccceEEEEEeCCCCEEEE-EcCCCcEEEEEcccCccccccceeeeccCCC------C
Q 009373 312 DVYIWDTN-SGCLLT--VVNGAHVGNTKSLARSHTGDFLFT-GGEDGAIHMYEIINDCTEANVLLVATWIPHT------G 381 (536)
Q Consensus 312 ~i~i~d~~-~~~~~~--~~~~~~~~~i~~l~~~~~~~~l~t-g~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~------~ 381 (536)
.|.+||+. +++... .+.......+..++|+|+|+++++ +..++.|.+|++..... ....+..+.... .
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g--~~~~~~~~~~~~~~~~~~~ 240 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG--AFTQLGIVKTIPADYTAHN 240 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT--EEEEEEEEESSCTTCCSCC
T ss_pred EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC--ceEEeeeeeecCCCCCCCC
Confidence 89999998 554332 222223346788999999996555 56789999999885211 111222222221 4
Q ss_pred CeEEEEEcC--CeE-EEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccc--cccEEEEEecCCEEEEec
Q 009373 382 PVNSLAFEF--PWL-VSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGF--ECNLLSVDIGADRIVCGG 456 (536)
Q Consensus 382 ~v~~l~~~~--~~l-~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~l~sg~ 456 (536)
.+..++|+| ++| ++...++.|.+|++..... ... ...+..+ ...-+++++++++|++++
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~---------~~~-------~~~~~~~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH---------LTL-------IQQISTEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC---------EEE-------EEEEECSSSCCCEEEECTTSSEEEEEE
T ss_pred cceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc---------EEE-------eEEEecCCCCcCeEEECCCCCEEEEEE
Confidence 588999987 566 5566789999999873210 000 0111111 223345556666776665
Q ss_pred C-CCeEEEEeCC
Q 009373 457 E-EGIVRIWNFS 467 (536)
Q Consensus 457 ~-Dg~i~vW~~~ 467 (536)
. ++.|.+|+++
T Consensus 305 ~~~~~v~v~~~d 316 (347)
T 3hfq_A 305 QNTDNATLYARD 316 (347)
T ss_dssp TTTTEEEEEEEC
T ss_pred cCCCcEEEEEEe
Confidence 4 5999999554
No 154
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.74 E-value=2.3e-16 Score=156.15 Aligned_cols=204 Identities=13% Similarity=0.072 Sum_probs=145.5
Q ss_pred ccccEEEEEEecCCCEEEEEeCCCcEEEEECCCC----------ceeeee-----CCCCceEE--EEecCCCEEE----E
Q 009373 157 HTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDG----------FSIASS-----KPLGCTIR--AVAADKKLLV----A 215 (536)
Q Consensus 157 h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~----------~~~~~~-----~~~~~~v~--~~~~~~~~l~----s 215 (536)
+...+..+++++++.++++|+.|+ +++|+.... ..+... ..+...+. ++++++++|+ +
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 345688999999999999999988 899875311 011111 12333454 4558999999 7
Q ss_pred EeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEe---CCEEEEEecCCeEEEEeCCCceEeEeee-c
Q 009373 216 GGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD---LTRIYSGSWDMTVRVWDRALLKCLKVLR-H 291 (536)
Q Consensus 216 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~ 291 (536)
|+.|++|++||+.++..... ...........+.+|.+.|.+++|+ +..|++++.||+|++||++++....... |
T Consensus 114 gs~d~~v~iwd~~~~~~~~~--~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~ 191 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAK--QQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPS 191 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTC--SSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECG
T ss_pred cCCCceEEEEEccccccCCc--CCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCC
Confidence 88999999999876410000 0000011234566799999999993 5789999999999999999886654443 7
Q ss_pred cccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEcc------ccccceEEEEEeCCCCEEEE-EcCCC------c
Q 009373 292 SDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNG------AHVGNTKSLARSHTGDFLFT-GGEDG------A 355 (536)
Q Consensus 292 ~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~------~~~~~i~~l~~~~~~~~l~t-g~~dg------~ 355 (536)
...|.+++ |++++|++++ |+.|++||++ ++....+.. .|...+.+++|++++.++++ ++.|| .
T Consensus 192 ~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~ 270 (434)
T 2oit_A 192 TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD 270 (434)
T ss_dssp GGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence 88899887 7899999888 8999999998 555555432 13348999999998877654 33443 3
Q ss_pred EEEEEcccC
Q 009373 356 IHMYEIIND 364 (536)
Q Consensus 356 i~iwd~~~~ 364 (536)
+++|+++..
T Consensus 271 v~i~~l~~~ 279 (434)
T 2oit_A 271 VVMALLPKK 279 (434)
T ss_dssp EEEEECCCT
T ss_pred eEEEEeccC
Confidence 899999865
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.73 E-value=5.5e-15 Score=143.04 Aligned_cols=274 Identities=10% Similarity=0.106 Sum_probs=169.5
Q ss_pred CCEEEEEeC----CCcEEEEEC--CCCce--eeeeCCCCceEEEEecCCCEEEEEeCC----CcEEEEEcccCccceecc
Q 009373 170 AKLLFTSGY----DSIVRMWHL--EDGFS--IASSKPLGCTIRAVAADKKLLVAGGTD----GFIHCWRAVEVLPHLFDI 237 (536)
Q Consensus 170 ~~~l~sgs~----dg~v~iwd~--~~~~~--~~~~~~~~~~v~~~~~~~~~l~sg~~d----g~i~vwd~~~~~~~~~~~ 237 (536)
..+++.|++ ++.|.+|.+ .+++. +...........+++|++++|++++.+ +.|.+|++....
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~------ 86 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK------ 86 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT------
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC------
Confidence 445666654 568888876 45543 222323333446888999999999886 899999986521
Q ss_pred cCcccccceEEeeCCccCEEEEEEeCCEEEEEe-cCCeEEEEeCCCceEeEee----ec-----------cccEE--EEe
Q 009373 238 SGSEKQNTQFRLWEHEGPITSLALDLTRIYSGS-WDMTVRVWDRALLKCLKVL----RH-----------SDWVY--GLA 299 (536)
Q Consensus 238 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~----~~-----------~~~v~--~~~ 299 (536)
...........+......++++++++++++ .++.|.+|++.....+..+ .+ ...+. .++
T Consensus 87 ---g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~s 163 (361)
T 3scy_A 87 ---GTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRIT 163 (361)
T ss_dssp ---TEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEEC
T ss_pred ---CcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEEC
Confidence 001223334445566777888888777776 6889999999754333221 11 11223 445
Q ss_pred ecCCEEEEec--CCcEEEEeCCCCcE------E------EEEccccccceEEEEEeCCCCEEEEEc-CCCcEEEEEcccC
Q 009373 300 PHDTTVASTS--GSDVYIWDTNSGCL------L------TVVNGAHVGNTKSLARSHTGDFLFTGG-EDGAIHMYEIIND 364 (536)
Q Consensus 300 ~~~~~l~~~~--d~~i~i~d~~~~~~------~------~~~~~~~~~~i~~l~~~~~~~~l~tg~-~dg~i~iwd~~~~ 364 (536)
|++++++++. ++.|.+|++..... + ......+...+..++|+|+|+++++++ .++.|.+||+.++
T Consensus 164 pdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 164 PDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred CCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence 8998666554 68899998875431 1 122223556788999999999887766 6899999999865
Q ss_pred ccccccceeeeccCCCCCeEEEEEcC--CeEEEEeC--CCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccc
Q 009373 365 CTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAG--DGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFEC 440 (536)
Q Consensus 365 ~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (536)
.. .....+.....+...+..++|+| ++|+++.. ++.|.+|++.... + ....+... ..+...
T Consensus 244 ~~-~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~-------g-~~~~~~~~------~~g~~~ 308 (361)
T 3scy_A 244 ML-DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN-------G-TLTKVGYQ------LTGIHP 308 (361)
T ss_dssp EE-EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT-------C-CEEEEEEE------ECSSCC
T ss_pred ce-EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC-------C-cEEEeeEe------cCCCCC
Confidence 21 11122233344556678999986 57766665 4899999986210 0 00000000 012223
Q ss_pred cEEEEEecCCEEEEec-CCCeEEEEeCC
Q 009373 441 NLLSVDIGADRIVCGG-EEGIVRIWNFS 467 (536)
Q Consensus 441 ~v~~~~~~~~~l~sg~-~Dg~i~vW~~~ 467 (536)
.-+++++++++|++++ .++.|.+|+++
T Consensus 309 ~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 309 RNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred ceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 3455666677776666 78999997665
No 156
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.73 E-value=7.2e-16 Score=163.83 Aligned_cols=232 Identities=10% Similarity=0.094 Sum_probs=160.8
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCc-----eE--EEEecCCCEEEEEeCC---------CcEEE
Q 009373 161 VLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGC-----TI--RAVAADKKLLVAGGTD---------GFIHC 224 (536)
Q Consensus 161 V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~-----~v--~~~~~~~~~l~sg~~d---------g~i~v 224 (536)
..++.|+|+|.+++++ |++|++||+.+++....+..|.. .. .+++|||+.|+.++.+ +.+.+
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 4578999999999986 99999999999998777766543 23 6788999999999886 56679
Q ss_pred EEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee--ccccE-----
Q 009373 225 WRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR--HSDWV----- 295 (536)
Q Consensus 225 wd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~v----- 295 (536)
||+.++. ...+..|.+.+...+| ||+.|+.+ .|+.|++||+.+++..+... +...+
T Consensus 97 ~d~~~~~--------------~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~ 161 (740)
T 4a5s_A 97 YDLNKRQ--------------LITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGIT 161 (740)
T ss_dssp EETTTTE--------------ECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBC
T ss_pred EECCCCc--------------EEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcc
Confidence 9998763 2235567778999999 78888887 47899999998877544221 22222
Q ss_pred --------------EEEeecCCEEEEec-C-C-----------------------------------cEEEEeCCC---C
Q 009373 296 --------------YGLAPHDTTVASTS-G-S-----------------------------------DVYIWDTNS---G 321 (536)
Q Consensus 296 --------------~~~~~~~~~l~~~~-d-~-----------------------------------~i~i~d~~~---~ 321 (536)
...+|+|+.|+... | + +|++||+.+ +
T Consensus 162 ~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~ 241 (740)
T 4a5s_A 162 DWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSV 241 (740)
T ss_dssp CHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSS
T ss_pred cccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCC
Confidence 34669999888764 2 1 488899988 7
Q ss_pred c--EEEEEcc-----ccccceEEEEEeCCCCEEEEEcC----CCcEEEEEcccCccccccceeeec--cCCCCCeE----
Q 009373 322 C--LLTVVNG-----AHVGNTKSLARSHTGDFLFTGGE----DGAIHMYEIINDCTEANVLLVATW--IPHTGPVN---- 384 (536)
Q Consensus 322 ~--~~~~~~~-----~~~~~i~~l~~~~~~~~l~tg~~----dg~i~iwd~~~~~~~~~~~~~~~~--~~h~~~v~---- 384 (536)
+ ....+.. +|...+..++|+|||+.++.... +..|.+||+.++........+..+ .+|...|.
T Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~ 321 (740)
T 4a5s_A 242 TNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 321 (740)
T ss_dssp SCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSC
T ss_pred CcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcC
Confidence 3 2233322 36778999999999996665432 347999999887310000111111 34555444
Q ss_pred -EEEEcC--CeEE-EEe-CCC--cEEEEECCc
Q 009373 385 -SLAFEF--PWLV-SAA-GDG--KLSLIDVRK 409 (536)
Q Consensus 385 -~l~~~~--~~l~-s~s-~dg--~i~vwd~~~ 409 (536)
...|+| +.|+ ..+ .+| .|++||+.+
T Consensus 322 ~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~ 353 (740)
T 4a5s_A 322 SEPHFTLDGNSFYKIISNEEGYRHICYFQIDK 353 (740)
T ss_dssp CCCEECTTSSEEEEEEECTTSCEEEEEEETTC
T ss_pred CCceEcCCCCEEEEEEEcCCCceEEEEEECCC
Confidence 678876 4555 555 344 578888765
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.71 E-value=1.1e-14 Score=140.83 Aligned_cols=242 Identities=10% Similarity=0.131 Sum_probs=158.1
Q ss_pred ccccEEEEEEecCCCEEEEEeCC----CcEEEEECCC--Cc--eeeeeCCCCceEEEEecCCCEEEEEe-CCCcEEEEEc
Q 009373 157 HTEAVLTVFVLASAKLLFTSGYD----SIVRMWHLED--GF--SIASSKPLGCTIRAVAADKKLLVAGG-TDGFIHCWRA 227 (536)
Q Consensus 157 h~~~V~~v~~~~~~~~l~sgs~d----g~v~iwd~~~--~~--~~~~~~~~~~~v~~~~~~~~~l~sg~-~dg~i~vwd~ 227 (536)
|...+..++|+|++++|++++.+ +.|.+|++.. ++ .+.....+......++.+++.|++++ .++.|.+|++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~ 127 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPI 127 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEB
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEe
Confidence 77788889999999999999886 7999998865 43 33334434444455555888777776 5789999998
Q ss_pred ccCccceecccCcccccceEEe--------eCCccCEEEEEE--eCCEEEEEe-cCCeEEEEeCCCceE------e----
Q 009373 228 VEVLPHLFDISGSEKQNTQFRL--------WEHEGPITSLAL--DLTRIYSGS-WDMTVRVWDRALLKC------L---- 286 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~--------~~h~~~v~~l~~--~~~~l~s~s-~dg~i~iwd~~~~~~------~---- 286 (536)
....... . ....... ..+...+.+++| +++++++++ .++.|.+|++..... +
T Consensus 128 ~~~g~~~-~------~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~ 200 (361)
T 3scy_A 128 GQDGALL-P------ASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKG 200 (361)
T ss_dssp CTTSCBC-S------CSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEE
T ss_pred CCCCcCc-c------cceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecc
Confidence 6532100 0 0000000 112344678888 667665554 589999998875431 1
Q ss_pred ----EeeeccccEEEE--eecCCEEEEec--CCcEEEEeCCCCcE--EEEEc--cccccceEEEEEeCCCCEEEEEcCC-
Q 009373 287 ----KVLRHSDWVYGL--APHDTTVASTS--GSDVYIWDTNSGCL--LTVVN--GAHVGNTKSLARSHTGDFLFTGGED- 353 (536)
Q Consensus 287 ----~~~~~~~~v~~~--~~~~~~l~~~~--d~~i~i~d~~~~~~--~~~~~--~~~~~~i~~l~~~~~~~~l~tg~~d- 353 (536)
........+..+ +|++++++++. ++.|.+||+.+++. +..+. ..+...+..++|+|+|++|+++..+
T Consensus 201 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~ 280 (361)
T 3scy_A 201 TPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK 280 (361)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS
T ss_pred cccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC
Confidence 112233444544 48998776655 78999999987754 22222 1233457899999999988766654
Q ss_pred -CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEe-CCCcEEEEECC
Q 009373 354 -GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAA-GDGKLSLIDVR 408 (536)
Q Consensus 354 -g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s-~dg~i~vwd~~ 408 (536)
+.|.+|++.... .....+..+.. ...+.+++|+| ++|++++ .++.|.+|++.
T Consensus 281 ~~~i~v~~~~~~~--g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 281 ADGVAIFKVDETN--GTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp SCEEEEEEECTTT--CCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEEEcCCC--CcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 899999996321 11123444433 55778999986 6788777 67899997654
No 158
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.69 E-value=7.3e-15 Score=143.60 Aligned_cols=243 Identities=11% Similarity=-0.004 Sum_probs=158.8
Q ss_pred ceeeeeCccccEEE-----EEEecCCCEEEEEeC-CCc--EEEEECCCCceeeeeCCCCceE--EEEecCCCEEEEEeCC
Q 009373 150 SIDVLYGHTEAVLT-----VFVLASAKLLFTSGY-DSI--VRMWHLEDGFSIASSKPLGCTI--RAVAADKKLLVAGGTD 219 (536)
Q Consensus 150 ~~~~l~~h~~~V~~-----v~~~~~~~~l~sgs~-dg~--v~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~l~sg~~d 219 (536)
.+..+..|...+.. .+|+|||++|+.++. ++. |.+||+.+++.......+...+ ..++|+++.|+.++.+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 45677777776666 889999999998887 674 8888999988777666655443 4788999999999999
Q ss_pred CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE----eCCEEEE----------------------EecCC
Q 009373 220 GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL----DLTRIYS----------------------GSWDM 273 (536)
Q Consensus 220 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~----~~~~l~s----------------------~s~dg 273 (536)
+.|++||+.++.. ......+...+....+ ++..++. ...+.
T Consensus 102 ~~l~~~d~~~g~~-------------~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 102 RNLMRVDLATLEE-------------NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp TEEEEEETTTCCE-------------EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred CeEEEEECCCCcc-------------eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcc
Confidence 9999999987642 2222333443433333 4555553 22457
Q ss_pred eEEEEeCCCceEeEeeeccccEEEEe--e-cCCEEEEec-C------CcEEEEeCCCCcEEEEEccccc-cceEEEEEeC
Q 009373 274 TVRVWDRALLKCLKVLRHSDWVYGLA--P-HDTTVASTS-G------SDVYIWDTNSGCLLTVVNGAHV-GNTKSLARSH 342 (536)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~v~~~~--~-~~~~l~~~~-d------~~i~i~d~~~~~~~~~~~~~~~-~~i~~l~~~~ 342 (536)
.|.+||+.+++......+...+..+. | +++.++... + ..|.++|+..++.. .+..... ..+....|+|
T Consensus 169 ~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~sp 247 (388)
T 3pe7_A 169 RLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEFWVP 247 (388)
T ss_dssp EEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEEECT
T ss_pred eEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccceECC
Confidence 89999999987766666666666554 8 888887665 2 26888888766543 3322222 3577889999
Q ss_pred CCCEEEEEcC-CC----cEEEEEcccCccccccceeeeccCCCCC---eEEEEEcC--CeEEEE---------eCCCcEE
Q 009373 343 TGDFLFTGGE-DG----AIHMYEIINDCTEANVLLVATWIPHTGP---VNSLAFEF--PWLVSA---------AGDGKLS 403 (536)
Q Consensus 343 ~~~~l~tg~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~h~~~---v~~l~~~~--~~l~s~---------s~dg~i~ 403 (536)
+|+.|+..+. ++ .|++||+.++.. ..+..+.++... ...+.|+| ..|+.. ..+..|+
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~----~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~ 323 (388)
T 3pe7_A 248 DGSALVYVSYLKGSPDRFIYSADPETLEN----RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLY 323 (388)
T ss_dssp TSSCEEEEEEETTCCCEEEEEECTTTCCE----EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEE
T ss_pred CCCEEEEEecCCCCCcceEEEEecCCCce----EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEE
Confidence 9997755433 22 399999988742 223333321100 11124554 455533 4567899
Q ss_pred EEECCcc
Q 009373 404 LIDVRKL 410 (536)
Q Consensus 404 vwd~~~~ 410 (536)
+||+.+.
T Consensus 324 ~~d~~~~ 330 (388)
T 3pe7_A 324 VFNMKNG 330 (388)
T ss_dssp EEETTTT
T ss_pred EEeccCC
Confidence 9999864
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.69 E-value=3.5e-16 Score=161.74 Aligned_cols=250 Identities=10% Similarity=0.030 Sum_probs=169.4
Q ss_pred ceEEEEecCCCEEEEEeC-CCcEEEEEcccCccceecccCcccccceEEeeCCc-cCEEEEEEeCC-EEEEEec---CCe
Q 009373 201 CTIRAVAADKKLLVAGGT-DGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHE-GPITSLALDLT-RIYSGSW---DMT 274 (536)
Q Consensus 201 ~~v~~~~~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~~~-~l~s~s~---dg~ 274 (536)
....+++|||+.|++++. ||++.+|++.++ ....+..|. ..+.+++|.++ .+++++. +..
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g--------------~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~ 89 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG--------------ETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQ 89 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETT--------------EEEECCSSCCSEECEECTTCSEEEEEEECSTTSCC
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCC--------------CcEeeecccccccccccCCCCeEEEEeccCCCCcc
Confidence 444556799999999887 999999998554 233444555 58889999444 4555554 455
Q ss_pred EEEEeCCC---ceEeEeee--ccccEEEEeecCC--EEEEecCCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEE
Q 009373 275 VRVWDRAL---LKCLKVLR--HSDWVYGLAPHDT--TVASTSGSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFL 347 (536)
Q Consensus 275 i~iwd~~~---~~~~~~~~--~~~~v~~~~~~~~--~l~~~~d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l 347 (536)
..+|.+.. +... .+. ....+.+++++++ .++++.++.+.+||+.+++...... +.. .+++|+|||++|
T Consensus 90 ~~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~--~~~--~~~~~spDG~~l 164 (582)
T 3o4h_A 90 HALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR--LPG--FGFVSDIRGDLI 164 (582)
T ss_dssp EEEEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE--ESS--CEEEEEEETTEE
T ss_pred eEEEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec--CCC--ceEEECCCCCEE
Confidence 56654432 2222 332 2333567778875 4444556667799999987655542 222 789999999999
Q ss_pred EEEcCC----CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCC--cEEEEECCcccccCCCCCC
Q 009373 348 FTGGED----GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDG--KLSLIDVRKLLRSGRPTSG 419 (536)
Q Consensus 348 ~tg~~d----g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg--~i~vwd~~~~~~~~~~~~~ 419 (536)
++++.+ +.|++||+.++. ...+..|.+.+..++|+| +.|+++..++ .|++||+.++...
T Consensus 165 a~~~~~~~~~~~i~~~d~~~g~-------~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~------ 231 (582)
T 3o4h_A 165 AGLGFFGGGRVSLFTSNLSSGG-------LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE------ 231 (582)
T ss_dssp EEEEEEETTEEEEEEEETTTCC-------CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE------
T ss_pred EEEEEcCCCCeEEEEEcCCCCC-------ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE------
Confidence 988777 779999988772 335678888999999987 6888888888 8999999875322
Q ss_pred CceeeEEeeCCCeeeecccccc----------EEEEEecCCEEEEecCCCeEEEEeCCchhhHHHHHHhhhcccchhHHH
Q 009373 420 KRVSRVIEVEPPQRMLHGFECN----------LLSVDIGADRIVCGGEEGIVRIWNFSQAFEIERRARALRGIRLENRMR 489 (536)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~----------v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (536)
.+.++... -.++++++..+++++.||.+++|++ ++... . . .
T Consensus 232 --------------~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~-------~--~----~ 282 (582)
T 3o4h_A 232 --------------DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE-------A--P----Q 282 (582)
T ss_dssp --------------ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC-------C--C----S
T ss_pred --------------EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec-------c--C----C
Confidence 11122111 1226667778999999999999999 43322 0 0 0
Q ss_pred hhhhccccccCCCCcceeEeecc
Q 009373 490 RRKLQTEMSSKGGRTDQCSVAAK 512 (536)
Q Consensus 490 ~~~~~~~~~~~g~~~~~~~~~~~ 512 (536)
.....++|+ +|+.+++++...+
T Consensus 283 ~~v~~~~~s-dg~~l~~~s~~~~ 304 (582)
T 3o4h_A 283 GNHGRVVLW-RGKLVTSHTSLST 304 (582)
T ss_dssp SEEEEEEEE-TTEEEEEEEETTE
T ss_pred CceEEEEec-CCEEEEEEcCCCC
Confidence 224578899 8888876655444
No 160
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.68 E-value=5.1e-15 Score=155.56 Aligned_cols=280 Identities=9% Similarity=-0.056 Sum_probs=181.3
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEE--eCCCcEEEEECCCCceeeeeCCCCce-----------EEEEe--cCCCE-E
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTS--GYDSIVRMWHLEDGFSIASSKPLGCT-----------IRAVA--ADKKL-L 213 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sg--s~dg~v~iwd~~~~~~~~~~~~~~~~-----------v~~~~--~~~~~-l 213 (536)
....+.+|...|..+++++++-+++++ +.++...||....+.....+..+... ...++ ||++. |
T Consensus 15 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~l 94 (662)
T 3azo_A 15 DAALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLL 94 (662)
T ss_dssp CHHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred CHHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEE
Confidence 345677899999999999877677777 56889999996555555555555433 23344 89988 7
Q ss_pred EEEeC-CCcEEEEEcc--c-CccceecccCcccccceEEeeC-----CccCEEEEEE--eCCEEEEEecC----------
Q 009373 214 VAGGT-DGFIHCWRAV--E-VLPHLFDISGSEKQNTQFRLWE-----HEGPITSLAL--DLTRIYSGSWD---------- 272 (536)
Q Consensus 214 ~sg~~-dg~i~vwd~~--~-~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~--~~~~l~s~s~d---------- 272 (536)
+.++. +..|.++++. + + ....+.. |...+.+++| +++.|++++.|
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~--------------~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGA--------------VPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCC--------------CCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred EEEECCCCeEEEEcCCCCCCC--------------CCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 66554 5667777664 2 2 1223333 5677888899 78899988877
Q ss_pred CeEEEEeCCC------ceEeEee-eccccEE--EEeecCCEEEEec-C--------CcEEEEeCC-CC--cEEEEEcccc
Q 009373 273 MTVRVWDRAL------LKCLKVL-RHSDWVY--GLAPHDTTVASTS-G--------SDVYIWDTN-SG--CLLTVVNGAH 331 (536)
Q Consensus 273 g~i~iwd~~~------~~~~~~~-~~~~~v~--~~~~~~~~l~~~~-d--------~~i~i~d~~-~~--~~~~~~~~~~ 331 (536)
..|++||+.+ ++..... .+...+. .++|+|+.|+.++ + ..|.+||+. ++ .....+..++
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred eEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 5899999988 6655444 4344444 3559999988766 4 369999999 56 2334443445
Q ss_pred ccceEEEEEeCCCCEEEEEcCCCc--EEEEEcccCccccccceeeeccCCCCC--------eEEEEEcC--CeEEEEeCC
Q 009373 332 VGNTKSLARSHTGDFLFTGGEDGA--IHMYEIINDCTEANVLLVATWIPHTGP--------VNSLAFEF--PWLVSAAGD 399 (536)
Q Consensus 332 ~~~i~~l~~~~~~~~l~tg~~dg~--i~iwd~~~~~~~~~~~~~~~~~~h~~~--------v~~l~~~~--~~l~s~s~d 399 (536)
...+..+.|+|+|+++++++.++. |.+||+.++. .......+... +.+++|++ .++++++.
T Consensus 241 ~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~------~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~- 313 (662)
T 3azo_A 241 EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA------ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK- 313 (662)
T ss_dssp TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC------EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-
T ss_pred CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc------eeecccccccccCccccccCceEeEeCCCEEEEEEEc-
Confidence 788999999999998888888884 5555544441 11111222221 56788864 67888888
Q ss_pred CcEEEEEC--CcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEE-EecCC--EEEEecCCCe--EEEEeCCchh
Q 009373 400 GKLSLIDV--RKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSV-DIGAD--RIVCGGEEGI--VRIWNFSQAF 470 (536)
Q Consensus 400 g~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~--~l~sg~~Dg~--i~vW~~~~~~ 470 (536)
+.++||.+ .+.. ...+..+...+..+ +++++ ++++++.+.. |.+||+.+++
T Consensus 314 ~~~~l~~~d~~~~~--------------------~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 314 GAAVLGILDPESGE--------------------LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp SSCEEEEEETTTTE--------------------EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CccEEEEEECCCCc--------------------EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 99999944 3321 11223334445566 77777 4455565654 5555665654
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.67 E-value=1.2e-14 Score=139.67 Aligned_cols=238 Identities=12% Similarity=0.003 Sum_probs=154.6
Q ss_pred ceeeeeCcc-ccEEEEEEecCCCEEE-EEeCCCcEEEEECCCCceeeeeCCCC--------ceEEEEecCCCEEEEEeCC
Q 009373 150 SIDVLYGHT-EAVLTVFVLASAKLLF-TSGYDSIVRMWHLEDGFSIASSKPLG--------CTIRAVAADKKLLVAGGTD 219 (536)
Q Consensus 150 ~~~~l~~h~-~~V~~v~~~~~~~~l~-sgs~dg~v~iwd~~~~~~~~~~~~~~--------~~v~~~~~~~~~l~sg~~d 219 (536)
.+..+..+. ..+..++|+|++++++ ++..++.|.+||+.+++.+..+.... ..-.+++|+++++++++.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 112 (349)
T 1jmx_B 33 VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNP 112 (349)
T ss_dssp EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEE
T ss_pred EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccc
Confidence 345555443 2578899999998654 55678999999999998877664322 2446788999999998865
Q ss_pred ------------CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceE
Q 009373 220 ------------GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKC 285 (536)
Q Consensus 220 ------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~ 285 (536)
+.|.+||+.++.. ......+. +...+.+++| +++ +++++ +.|.+||..+++.
T Consensus 113 ~~~~~~~~~~~~~~i~~~d~~~~~~----------~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~ 178 (349)
T 1jmx_B 113 TQRLNDHYVVKPPRLEVFSTADGLE----------AKPVRTFP-MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKY 178 (349)
T ss_dssp EEECSSCEEECCCEEEEEEGGGGGG----------BCCSEEEE-CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCE
T ss_pred ccccccccccCCCeEEEEECCCccc----------cceeeecc-CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCce
Confidence 9999999977531 11122222 3345778888 566 66554 3499999999988
Q ss_pred eEeeeccc-------------------------cEEEEe--ecCCEEEEec--CCcEEEEeCCCCcEEEEEccccccceE
Q 009373 286 LKVLRHSD-------------------------WVYGLA--PHDTTVASTS--GSDVYIWDTNSGCLLTVVNGAHVGNTK 336 (536)
Q Consensus 286 ~~~~~~~~-------------------------~v~~~~--~~~~~l~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~i~ 336 (536)
...+.... ....+. +++....... ...+..+|..+++....-...+...+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (349)
T 1jmx_B 179 TVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYF 258 (349)
T ss_dssp EEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEE
T ss_pred eccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcce
Confidence 77665221 111111 1111000000 111223555555432221123556788
Q ss_pred EEEEeC-CCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcc
Q 009373 337 SLARSH-TGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 337 ~l~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~ 410 (536)
.++++| ++++++++ ++.|.+||+.++ ..+..+.. ...+.+++|++ ++|++++.++.|.+||+.+.
T Consensus 259 ~~~~sp~dg~~l~~~--~~~v~~~d~~~~------~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 259 TGLRSPKDPNQIYGV--LNRLAKYDLKQR------KLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp EEEECSSCTTEEEEE--ESEEEEEETTTT------EEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred eeEecCCCCCEEEEE--cCeEEEEECccC------eEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 999999 99999888 889999999887 34444332 34567899986 57888888999999999875
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.66 E-value=3e-15 Score=158.90 Aligned_cols=297 Identities=11% Similarity=0.032 Sum_probs=186.5
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCC-----ceEEEEecCCCEEEEEeC---------CCcEEEEEcc
Q 009373 163 TVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLG-----CTIRAVAADKKLLVAGGT---------DGFIHCWRAV 228 (536)
Q Consensus 163 ~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~l~sg~~---------dg~i~vwd~~ 228 (536)
+++|+|++.++++ +.|++|++||+.+++....+..+. ....+++|||+.|++++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6789999965554 569999999999998877665542 456678899999999876 7899999998
Q ss_pred cCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee--cccc----------
Q 009373 229 EVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR--HSDW---------- 294 (536)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~---------- 294 (536)
++... ....+ ...+.+++| ||+.|++++ |+.|++||+.+++...... +...
T Consensus 99 ~g~~~-----------~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~ 163 (719)
T 1z68_A 99 NGEFV-----------RGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVY 163 (719)
T ss_dssp TTEEC-----------CSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHH
T ss_pred CCccc-----------cceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEccccccee
Confidence 76410 00111 245777888 788888875 7899999998887654332 2221
Q ss_pred ---------EEEEeecCCEEEEec-CC----------------------------------cEEEEeCCCCcEE--EEEc
Q 009373 295 ---------VYGLAPHDTTVASTS-GS----------------------------------DVYIWDTNSGCLL--TVVN 328 (536)
Q Consensus 295 ---------v~~~~~~~~~l~~~~-d~----------------------------------~i~i~d~~~~~~~--~~~~ 328 (536)
-..++|+|+.|+.++ +. .|++||+.+++.. ..+.
T Consensus 164 ~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 243 (719)
T 1z68_A 164 EEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVP 243 (719)
T ss_dssp HHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECC
T ss_pred eeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEcc
Confidence 244569999998876 31 7889999988752 1221
Q ss_pred -----cccccceEEEEEeCCCCEEEEEcCC----CcEEEEE----cccCccccccceeeec----cCCCCCeE-----EE
Q 009373 329 -----GAHVGNTKSLARSHTGDFLFTGGED----GAIHMYE----IINDCTEANVLLVATW----IPHTGPVN-----SL 386 (536)
Q Consensus 329 -----~~~~~~i~~l~~~~~~~~l~tg~~d----g~i~iwd----~~~~~~~~~~~~~~~~----~~h~~~v~-----~l 386 (536)
.+|...+..++|+||++++++.... ..|.+|| +.++ .....+ .+|...+. .+
T Consensus 244 ~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (719)
T 1z68_A 244 VPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW------DCPKTQEHIEESRTGWAGGFFVSTP 317 (719)
T ss_dssp CCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE------ECCGGGEEEEECSSSCSSSSSCCCC
T ss_pred CCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC------ceEEEEecccccCCceEccccCCcc
Confidence 2477789999999998877764432 2488888 6555 222233 35666666 78
Q ss_pred EEcC--CeEE--EEeCCC--cEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEE-ecCCEEEEecC--
Q 009373 387 AFEF--PWLV--SAAGDG--KLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVD-IGADRIVCGGE-- 457 (536)
Q Consensus 387 ~~~~--~~l~--s~s~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~l~sg~~-- 457 (536)
.|+| +.|+ ++..+| .|.+||+.+... ..+..+...+..+. ++++.|+..+.
T Consensus 318 ~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~--------------------~~lt~~~~~v~~~~~~d~~~i~~~~~~~ 377 (719)
T 1z68_A 318 VFSYDAISYYKIFSDKDGYKHIHYIKDTVENA--------------------IQITSGKWEAINIFRVTQDSLFYSSNEF 377 (719)
T ss_dssp EECTTSSCEEEEEECTTSCEEEEEESSCSTTC--------------------EECSCSSSCEEEEEEECSSEEEEEESCG
T ss_pred EECCCCCeEEEEEEccCCceEEEEEECCCCce--------------------EecccCceEEEEEEEEeCCEEEEEEecC
Confidence 8976 4333 344565 466667654320 11111222222211 15555544443
Q ss_pred ---CCeEEEEeCCc--hh-hHHHHHHhhhcccchhHHHhhhhccccccCCCCccee
Q 009373 458 ---EGIVRIWNFSQ--AF-EIERRARALRGIRLENRMRRRKLQTEMSSKGGRTDQC 507 (536)
Q Consensus 458 ---Dg~i~vW~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 507 (536)
++.+++|.+.. +. ........+.+ .......+.|+|+|+.++..
T Consensus 378 ~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~------~~~~~~~~~~s~dg~~l~~~ 427 (719)
T 1z68_A 378 EEYPGRRNIYRISIGSYPPSKKCVTCHLRK------ERCQYYTASFSDYAKYYALV 427 (719)
T ss_dssp GGCTTCBEEEEEECSSSSCCEEESSTTTTT------TTBCBEEEEECGGGSSEEEE
T ss_pred CCCCceEEEEEEeCCCCCCCceeccCccCC------CCCceEEEEECCCCCEEEEE
Confidence 48899998864 21 01111000000 01123467899999988854
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.65 E-value=3.7e-15 Score=158.16 Aligned_cols=256 Identities=9% Similarity=-0.017 Sum_probs=164.7
Q ss_pred hccccCCccceeeeeCccc---cEEEEEEecCCCEEEEEeC---------CCcEEEEECCCCcee--eeeCCCCceEEEE
Q 009373 141 RSKTFLGRYSIDVLYGHTE---AVLTVFVLASAKLLFTSGY---------DSIVRMWHLEDGFSI--ASSKPLGCTIRAV 206 (536)
Q Consensus 141 ~~~~~~~~~~~~~l~~h~~---~V~~v~~~~~~~~l~sgs~---------dg~v~iwd~~~~~~~--~~~~~~~~~v~~~ 206 (536)
+.+...+......+.+|.. .|.+++|+|||++|++++. |+.|++||+.+++.+ ..+. ......++
T Consensus 39 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~-~~~~~~~~ 117 (719)
T 1z68_A 39 VLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP-RPIQYLCW 117 (719)
T ss_dssp EEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC-SSBCCEEE
T ss_pred EEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC-cccccceE
Confidence 3344444444555666654 4999999999999998876 789999999998763 2222 23444678
Q ss_pred ecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCE---------EEEEE--eCCEEEEEecCC--
Q 009373 207 AADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPI---------TSLAL--DLTRIYSGSWDM-- 273 (536)
Q Consensus 207 ~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v---------~~l~~--~~~~l~s~s~dg-- 273 (536)
+|||+.|+.+. ++.|++|++.++........+. ....+.+|...| .+++| ||+.|++++.|.
T Consensus 118 SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~----~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~ 192 (719)
T 1z68_A 118 SPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGR----ENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTD 192 (719)
T ss_dssp CSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCB----TTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTT
T ss_pred CCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCC----cCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCC
Confidence 89999999886 7899999998764321111110 001122332222 47888 788999888653
Q ss_pred --------------------------------eEEEEeCCCceEe---Ee-----e-eccccEEEEe--ecCCEEEEecC
Q 009373 274 --------------------------------TVRVWDRALLKCL---KV-----L-RHSDWVYGLA--PHDTTVASTSG 310 (536)
Q Consensus 274 --------------------------------~i~iwd~~~~~~~---~~-----~-~~~~~v~~~~--~~~~~l~~~~d 310 (536)
.|++||+.+++.. .. + .+...+..++ |+++++++..+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~ 272 (719)
T 1z68_A 193 IPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK 272 (719)
T ss_dssp SCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE
T ss_pred CceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec
Confidence 7889999987753 11 1 1555666665 88877766442
Q ss_pred -----CcEEEEe----CCCCcEEEEEc---cccccceE-----EEEEeCCCCEEE--EEcCCCc--EEEEEcccCccccc
Q 009373 311 -----SDVYIWD----TNSGCLLTVVN---GAHVGNTK-----SLARSHTGDFLF--TGGEDGA--IHMYEIINDCTEAN 369 (536)
Q Consensus 311 -----~~i~i~d----~~~~~~~~~~~---~~~~~~i~-----~l~~~~~~~~l~--tg~~dg~--i~iwd~~~~~~~~~ 369 (536)
..|.+|| +.+++....+. .+|...+. .+.|+|+|+.++ ++..+|. |.+||+.++
T Consensus 273 ~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~----- 347 (719)
T 1z68_A 273 RVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE----- 347 (719)
T ss_dssp SSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST-----
T ss_pred cccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC-----
Confidence 2488999 87776543331 34666666 789999999554 4556665 555565554
Q ss_pred cceeeeccCCCCCeEEEEE-cCCeEEEEeCC-----CcEEEEECCc
Q 009373 370 VLLVATWIPHTGPVNSLAF-EFPWLVSAAGD-----GKLSLIDVRK 409 (536)
Q Consensus 370 ~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~d-----g~i~vwd~~~ 409 (536)
. ...+..+...+..+.+ +++.|+..+.+ +.+++|.+..
T Consensus 348 -~-~~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 348 -N-AIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp -T-CEECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred -c-eEecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeC
Confidence 1 3344455556666544 44566666654 8899998764
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.65 E-value=8e-14 Score=134.99 Aligned_cols=271 Identities=11% Similarity=0.083 Sum_probs=162.4
Q ss_pred EEEEEeCC--CcEEEEEC--CCCcee--eeeC-C--CCceEEEEecCCCEEEEEeCCCcEEEEEcc-cCccceecccCcc
Q 009373 172 LLFTSGYD--SIVRMWHL--EDGFSI--ASSK-P--LGCTIRAVAADKKLLVAGGTDGFIHCWRAV-EVLPHLFDISGSE 241 (536)
Q Consensus 172 ~l~sgs~d--g~v~iwd~--~~~~~~--~~~~-~--~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~-~~~~~~~~~~~~~ 241 (536)
+++.|++. +.|.+|++ .+++.. .... . ....-.+++|++++|++++.+ .|.+|++. ++..
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~--------- 73 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEI--------- 73 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEE---------
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCE---------
Confidence 35566653 46777664 455432 2221 1 233457788999999999988 99999986 4421
Q ss_pred cccceEEeeCCccCEEEEEE--eCCE--EEEEe-------------cCCeEEEEeCC-CceEeEeee-----ccccEEEE
Q 009373 242 KQNTQFRLWEHEGPITSLAL--DLTR--IYSGS-------------WDMTVRVWDRA-LLKCLKVLR-----HSDWVYGL 298 (536)
Q Consensus 242 ~~~~~~~~~~h~~~v~~l~~--~~~~--l~s~s-------------~dg~i~iwd~~-~~~~~~~~~-----~~~~v~~~ 298 (536)
........+ +.+..+++ ++++ +++++ .+|++.+|++. .++....+. +...+.++
T Consensus 74 --~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~ 150 (365)
T 1jof_A 74 --VHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGM 150 (365)
T ss_dssp --EEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEE
T ss_pred --EEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEE
Confidence 011111111 12334566 5563 44553 68999999997 465544333 34456665
Q ss_pred e--ecCCEEEEec--CCcEEEEeCC-CCcEE--EEEcc-ccccceEEEEEeCCCCEEEEEcC-CCcEEEEEccc--Cccc
Q 009373 299 A--PHDTTVASTS--GSDVYIWDTN-SGCLL--TVVNG-AHVGNTKSLARSHTGDFLFTGGE-DGAIHMYEIIN--DCTE 367 (536)
Q Consensus 299 ~--~~~~~l~~~~--d~~i~i~d~~-~~~~~--~~~~~-~~~~~i~~l~~~~~~~~l~tg~~-dg~i~iwd~~~--~~~~ 367 (536)
. |+|++++++. ++.|++||+. +++.. ..+.. .|...+..++|+|+|+++++++. ++.|.+|++.. +...
T Consensus 151 ~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~ 230 (365)
T 1jof_A 151 VFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPV 230 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEE
Confidence 5 8999887765 5789999998 67653 22321 13567899999999998887765 78999998763 3110
Q ss_pred cccceeeecc----CCCC------CeEEEE-EcC--CeEEEEeCC-C-----cEEEEECCc-ccccCCCCCCCceeeEEe
Q 009373 368 ANVLLVATWI----PHTG------PVNSLA-FEF--PWLVSAAGD-G-----KLSLIDVRK-LLRSGRPTSGKRVSRVIE 427 (536)
Q Consensus 368 ~~~~~~~~~~----~h~~------~v~~l~-~~~--~~l~s~s~d-g-----~i~vwd~~~-~~~~~~~~~~~~~~~~~~ 427 (536)
.....+..+. +|.. .+..++ |+| ++|++++.+ + .|.+|++.. +. ...+..
T Consensus 231 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~----------~~~~~~ 300 (365)
T 1jof_A 231 YTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS----------IEKQLF 300 (365)
T ss_dssp EEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC----------EEEEEE
T ss_pred EccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC----------EEEeee
Confidence 0001122222 2232 588999 987 577766543 2 899999862 21 000000
Q ss_pred eCCCeeeeccccccEEEEEe---cCCEEEEecC-CCeEEEEeCCch
Q 009373 428 VEPPQRMLHGFECNLLSVDI---GADRIVCGGE-EGIVRIWNFSQA 469 (536)
Q Consensus 428 ~~~~~~~~~~~~~~v~~~~~---~~~~l~sg~~-Dg~i~vW~~~~~ 469 (536)
.. ...+....-+++++ ++++|++++. ++.|.+|+++..
T Consensus 301 ~~----~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 301 LS----PTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EE----ECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ee----ecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 00 00111223346777 7888888876 499999998764
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.64 E-value=3e-13 Score=126.11 Aligned_cols=231 Identities=13% Similarity=0.109 Sum_probs=159.6
Q ss_pred eCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCC------CCceE--EEEe-cCCCEEEEEeC-CCcEEE
Q 009373 155 YGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKP------LGCTI--RAVA-ADKKLLVAGGT-DGFIHC 224 (536)
Q Consensus 155 ~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~------~~~~v--~~~~-~~~~~l~sg~~-dg~i~v 224 (536)
.+|-..+.+++++++++++++.+.++.|.+||.. ++.+..+.. +.... .++. +++.++++... ++.|.+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 4667789999999999999988899999999987 666655532 22233 3443 45555555533 899999
Q ss_pred EEcccCccceecccCcccccceEEee-CCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee---ccccEEEE
Q 009373 225 WRAVEVLPHLFDISGSEKQNTQFRLW-EHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR---HSDWVYGL 298 (536)
Q Consensus 225 wd~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~---~~~~v~~~ 298 (536)
||. ++. ....+. .+...+.++++ +++.+++...++.|.+||.. ++....+. +...+.++
T Consensus 105 ~d~-~g~-------------~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i 169 (286)
T 1q7f_A 105 YNQ-YGQ-------------FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGV 169 (286)
T ss_dssp ECT-TSC-------------EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEE
T ss_pred ECC-CCc-------------EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEE
Confidence 994 332 122221 23456888998 55667777778999999964 55555554 23446666
Q ss_pred e--ecCCEEEEec-CCcEEEEeCCCCcEEEEEcc-ccccceEEEEEeCCCCEEEEEcCCC-cEEEEEcccCcccccccee
Q 009373 299 A--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNG-AHVGNTKSLARSHTGDFLFTGGEDG-AIHMYEIINDCTEANVLLV 373 (536)
Q Consensus 299 ~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~tg~~dg-~i~iwd~~~~~~~~~~~~~ 373 (536)
+ ++++++++.. ++.|++||. +++.+..+.. ++...+..++++++|.++++...++ .|.+||.... .+
T Consensus 170 ~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~-------~~ 241 (286)
T 1q7f_A 170 VVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ-------LI 241 (286)
T ss_dssp EECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC-------EE
T ss_pred EECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC-------EE
Confidence 5 7788777766 789999997 4555666532 2236789999999999888888776 9999995432 33
Q ss_pred eeccCC--CCCeEEEEEcC-CeEEEEeCCCcEEEEECCc
Q 009373 374 ATWIPH--TGPVNSLAFEF-PWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 374 ~~~~~h--~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~ 409 (536)
..+..+ ...+.++++++ ..|+.++.|+.|++|++..
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 242 SALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred EEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 333333 23478999986 3455557899999999865
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.64 E-value=1.8e-13 Score=130.34 Aligned_cols=242 Identities=12% Similarity=0.036 Sum_probs=167.3
Q ss_pred cccEEEEEEecCCCEEEEEeCC------------------------CcEEEEECCCCceeeeeCC-C--CceEEEEecCC
Q 009373 158 TEAVLTVFVLASAKLLFTSGYD------------------------SIVRMWHLEDGFSIASSKP-L--GCTIRAVAADK 210 (536)
Q Consensus 158 ~~~V~~v~~~~~~~~l~sgs~d------------------------g~v~iwd~~~~~~~~~~~~-~--~~~v~~~~~~~ 210 (536)
-+.|.+++++|+|+++++.+.+ ++|.+||..+++.+..+.. + ...-+++.+++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3679999999999999988877 4799999999988776642 2 22335666899
Q ss_pred CEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEe---CCEEEEEe-cCCeEEEEeCCCceEe
Q 009373 211 KLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD---LTRIYSGS-WDMTVRVWDRALLKCL 286 (536)
Q Consensus 211 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~s-~dg~i~iwd~~~~~~~ 286 (536)
+++++...++.|++|+.......+..+..... ...-.++......++++ +..+++.+ .++.|++|| .+++.+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~---~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~ 178 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ---PGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFV 178 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTB---CCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCC---CCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEE
Confidence 98888888999999997543111111100000 00002345568899994 34555554 589999999 567776
Q ss_pred Eeeecc-----------ccEEEEe--ec-CCEEEEec-CCcEEEEeCCCCcEEEEEcc-ccccceEEEEEeC------CC
Q 009373 287 KVLRHS-----------DWVYGLA--PH-DTTVASTS-GSDVYIWDTNSGCLLTVVNG-AHVGNTKSLARSH------TG 344 (536)
Q Consensus 287 ~~~~~~-----------~~v~~~~--~~-~~~l~~~~-d~~i~i~d~~~~~~~~~~~~-~~~~~i~~l~~~~------~~ 344 (536)
..+... .....++ ++ +.++++.. ++.|++||..+++.+..+.. .+...+.+++++| +|
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g 258 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNG 258 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEEC
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCC
Confidence 666411 1255555 66 66666666 78999999998998888742 3556788999999 33
Q ss_pred CEEEEEcCCCcEEEEEcccCccccccceeeec---cCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCc
Q 009373 345 DFLFTGGEDGAIHMYEIINDCTEANVLLVATW---IPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 345 ~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~---~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~ 409 (536)
...++...+..|++||+.++ ..+..+ .++...+.+|++++ ..+++...++.|++|++..
T Consensus 259 ~~~v~~~~~~~v~~~~~~~g------~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 259 KPYFGDQEPVQGFVMNFSSG------EIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCCTTCSCCCCEEEEETTTC------CEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CEEeccCCCcEEEEEEcCCC------eEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 33333334558999999887 444444 46777899999987 4677777889999999864
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.64 E-value=2e-14 Score=140.45 Aligned_cols=292 Identities=11% Similarity=0.028 Sum_probs=179.1
Q ss_pred EEEECCCCceeeeeCCCCceEE-------EEecCCCEEEEEeC-CCc--EEEEEcccCccceecccCcccccceEEeeCC
Q 009373 183 RMWHLEDGFSIASSKPLGCTIR-------AVAADKKLLVAGGT-DGF--IHCWRAVEVLPHLFDISGSEKQNTQFRLWEH 252 (536)
Q Consensus 183 ~iwd~~~~~~~~~~~~~~~~v~-------~~~~~~~~l~sg~~-dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h 252 (536)
..++..++..+..+..+..... +++|||+.|+.++. +|. |.+||+.++. ......++
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~-------------~~~lt~~~ 79 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV-------------ATQLTEGR 79 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCE-------------EEECCCSS
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCc-------------eEEeeeCC
Confidence 3457777888888877765544 47899999998887 674 7788886653 22223344
Q ss_pred ccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEE----EEeecCCEEEEe-----------------
Q 009373 253 EGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVY----GLAPHDTTVAST----------------- 308 (536)
Q Consensus 253 ~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~----~~~~~~~~l~~~----------------- 308 (536)
...+....| +++.|+.++.++.|++||+.+++...... +...+. .+.++++.++..
T Consensus 80 ~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~ 159 (388)
T 3pe7_A 80 GDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFH 159 (388)
T ss_dssp CBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHH
T ss_pred CCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhh
Confidence 444444566 78899999999999999999988776665 333332 234788887742
Q ss_pred ------cCCcEEEEeCCCCcEEEEEccccccceEEEEEeC-CCCEEEEEcCC------CcEEEEEcccCccccccceeee
Q 009373 309 ------SGSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSH-TGDFLFTGGED------GAIHMYEIINDCTEANVLLVAT 375 (536)
Q Consensus 309 ------~d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~l~tg~~d------g~i~iwd~~~~~~~~~~~~~~~ 375 (536)
.+..|.+||+.+++..... .+...+..+.|+| +|+.|+....+ ..|.++|..... ...
T Consensus 160 ~~~~~~~~~~l~~~d~~~g~~~~l~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-------~~~ 230 (388)
T 3pe7_A 160 EFYFTKPCCRLMRVDLKTGESTVIL--QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-------MRK 230 (388)
T ss_dssp HHGGGCCCEEEEEEETTTCCEEEEE--EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-------CEE
T ss_pred hhhccCCcceEEEEECCCCceEEee--cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-------eEE
Confidence 1367999999998765544 3666789999999 99988877653 367777766541 223
Q ss_pred ccCCC--CCeEEEEEcC--CeEEEEeC-CC----cEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEE
Q 009373 376 WIPHT--GPVNSLAFEF--PWLVSAAG-DG----KLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVD 446 (536)
Q Consensus 376 ~~~h~--~~v~~l~~~~--~~l~s~s~-dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 446 (536)
+..+. ..+...+|+| +.|+..+. ++ .|++||+.++... .+............... ..++
T Consensus 231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~----------~l~~~~~~~~~~~~~~~--~~~s 298 (388)
T 3pe7_A 231 VKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR----------QLTSMPACSHLMSNYDG--SLMV 298 (388)
T ss_dssp SCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE----------EEEEECCEEEEEECTTS--SEEE
T ss_pred eeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceE----------EEEcCCCceeeeecCCC--CeEc
Confidence 33333 3577889986 45544333 22 3999999875321 11111110000000111 1567
Q ss_pred ecCCEEEEe---------cCCCeEEEEeCCchhhHHHHHHhhhc-ccchhHHHhhhhccccccCCCCcceeEe
Q 009373 447 IGADRIVCG---------GEEGIVRIWNFSQAFEIERRARALRG-IRLENRMRRRKLQTEMSSKGGRTDQCSV 509 (536)
Q Consensus 447 ~~~~~l~sg---------~~Dg~i~vW~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 509 (536)
++++.|+.. +.+..|++||+.++... ........ .............++|+|||+.++..+.
T Consensus 299 pdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 299 GDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH-RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp EEECCC------------CCCCEEEEEETTTTEEE-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred cCCCcceeEeeeccccccCCCCEEEEEeccCCceE-EeccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence 788866532 56779999999886531 11100000 0000000012467899999999997764
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.63 E-value=3.3e-14 Score=137.74 Aligned_cols=238 Identities=10% Similarity=0.089 Sum_probs=155.3
Q ss_pred ccccEEEEEEecCCCEEEEEeCCCcEEEEECC-CCceeeeeC--CCC-ceEEEEecCCCE--EEEEe-------------
Q 009373 157 HTEAVLTVFVLASAKLLFTSGYDSIVRMWHLE-DGFSIASSK--PLG-CTIRAVAADKKL--LVAGG------------- 217 (536)
Q Consensus 157 h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~-~~~~~~~~~--~~~-~~v~~~~~~~~~--l~sg~------------- 217 (536)
+...+..++|+|++++|++++.+ .|.+|++. +++...... .+. ....+++|+++. +++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 44568899999999999999988 99999997 776543221 111 122455688984 55553
Q ss_pred CCCcEEEEEccc-CccceecccCcccccceEEe-eCCccCEEEEEE--eCCEEEEEe-cCCeEEEEeCC-CceEe--Eee
Q 009373 218 TDGFIHCWRAVE-VLPHLFDISGSEKQNTQFRL-WEHEGPITSLAL--DLTRIYSGS-WDMTVRVWDRA-LLKCL--KVL 289 (536)
Q Consensus 218 ~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~--~~~~l~s~s-~dg~i~iwd~~-~~~~~--~~~ 289 (536)
.+|++.+|++.. +.. ......+ ..+...+.+++| ++++++++. .++.|.+||+. +++.. ..+
T Consensus 117 ~~g~v~v~~~~~~g~~----------~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~ 186 (365)
T 1jof_A 117 FAGYGNVFSVSETGKL----------EKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSV 186 (365)
T ss_dssp SCCEEEEEEECTTCCE----------EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEE
T ss_pred CCceEEEEccCCCCcC----------cceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeE
Confidence 689999999863 320 0011111 124567889999 677787765 46899999998 67653 223
Q ss_pred e---ccccEEEEe--ecCCEEEEec--CCcEEEEeCC--CCcEEE---EEcc------cccc------ceEEEE-EeCCC
Q 009373 290 R---HSDWVYGLA--PHDTTVASTS--GSDVYIWDTN--SGCLLT---VVNG------AHVG------NTKSLA-RSHTG 344 (536)
Q Consensus 290 ~---~~~~v~~~~--~~~~~l~~~~--d~~i~i~d~~--~~~~~~---~~~~------~~~~------~i~~l~-~~~~~ 344 (536)
. +...+..+. |++++++++. ++.|.+|++. +++... .+.. +|.. .+..++ |+|+|
T Consensus 187 ~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG 266 (365)
T 1jof_A 187 DAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSG 266 (365)
T ss_dssp ECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTS
T ss_pred ecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCC
Confidence 2 244565554 8998887765 5889998764 565421 2211 1222 588999 99999
Q ss_pred CEEEEEcCCC------cEEEEEcc-cCccccccceee-eccCCCCCeEEEEEcC-----CeEEEEeCC-CcEEEEECCc
Q 009373 345 DFLFTGGEDG------AIHMYEII-NDCTEANVLLVA-TWIPHTGPVNSLAFEF-----PWLVSAAGD-GKLSLIDVRK 409 (536)
Q Consensus 345 ~~l~tg~~dg------~i~iwd~~-~~~~~~~~~~~~-~~~~h~~~v~~l~~~~-----~~l~s~s~d-g~i~vwd~~~ 409 (536)
++|++++.+. .|.+|++. ++. ...+. ....+...+..++|+| ++|++++.+ +.|.+|++..
T Consensus 267 ~~l~v~~~~~~~~~~~~i~v~~~~~~g~----~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 267 KYMFASSRANKFELQGYIAGFKLRDCGS----IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp SEEEEEEEESSTTSCCEEEEEEECTTSC----EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CEEEEECCCCCCCCCCeEEEEEECCCCC----EEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 9888765432 89999996 331 11111 1223444556677765 688888764 8999999865
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.61 E-value=7.9e-14 Score=134.49 Aligned_cols=286 Identities=12% Similarity=0.087 Sum_probs=179.9
Q ss_pred CCCEEEEEe------CCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeC----------CCcEEEEEcccCcc
Q 009373 169 SAKLLFTSG------YDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGT----------DGFIHCWRAVEVLP 232 (536)
Q Consensus 169 ~~~~l~sgs------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~----------dg~i~vwd~~~~~~ 232 (536)
++++++... .|+.|.+||..+++.+..+..+..+-.+++|++++++++.. +++|.+||..+.+
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~- 92 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT- 92 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC-
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc-
Confidence 445555443 37899999999999888887766666778899999999863 6789999987653
Q ss_pred ceecccCcccccceEEeeC------CccCEEEEEE--eCCEEEEEec--CCeEEEEeCCCceEeEe-eeccccE-EEEee
Q 009373 233 HLFDISGSEKQNTQFRLWE------HEGPITSLAL--DLTRIYSGSW--DMTVRVWDRALLKCLKV-LRHSDWV-YGLAP 300 (536)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~--~~~~l~s~s~--dg~i~iwd~~~~~~~~~-~~~~~~v-~~~~~ 300 (536)
....+.. +......+++ ++++|+++.. +++|.+||+.+++.+.. +...... ..+.|
T Consensus 93 ------------~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p 160 (361)
T 2oiz_A 93 ------------FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQP 160 (361)
T ss_dssp ------------EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECT
T ss_pred ------------EEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcC
Confidence 2222211 1233455677 7888888864 58999999999998887 6643321 22345
Q ss_pred cC-CEEEEec-CCcEEEEeCCC-CcEEEEEc-----cccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccce
Q 009373 301 HD-TTVASTS-GSDVYIWDTNS-GCLLTVVN-----GAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLL 372 (536)
Q Consensus 301 ~~-~~l~~~~-d~~i~i~d~~~-~~~~~~~~-----~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~ 372 (536)
++ ..+++.+ ||.+.+++... ++...... .....+ ..+.+++++..++..+.++.|.++|+..... ..
T Consensus 161 ~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~----~~ 235 (361)
T 2oiz_A 161 NRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEV----KV 235 (361)
T ss_dssp TSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSC----EE
T ss_pred CCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCc----ee
Confidence 44 4444444 89999998865 55442211 111112 2334467787777788899999999865421 11
Q ss_pred eeecc--C----C----CCCeEEEEEcC--CeEEEEeC-----------CCcEEEEECCcccccCCCCCCCceeeEEeeC
Q 009373 373 VATWI--P----H----TGPVNSLAFEF--PWLVSAAG-----------DGKLSLIDVRKLLRSGRPTSGKRVSRVIEVE 429 (536)
Q Consensus 373 ~~~~~--~----h----~~~v~~l~~~~--~~l~s~s~-----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 429 (536)
...+. . + ......++|++ +.++++.. .+.|.+||+.+.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v---------------- 299 (361)
T 2oiz_A 236 DGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRV---------------- 299 (361)
T ss_dssp EEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEE----------------
T ss_pred cccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEE----------------
Confidence 11110 0 0 01112256765 56665543 347999999875322
Q ss_pred CCeeeeccccccEEEEEecCCEEEEecCCCeEEEEeCCch--hhHHHHHHhhhcccchhHHHhhhhccccccCCC
Q 009373 430 PPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQA--FEIERRARALRGIRLENRMRRRKLQTEMSSKGG 502 (536)
Q Consensus 430 ~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 502 (536)
..+..+...-+.+++++++|++++. +.|.+||..++ +.+.+.... -..+..++++|+|+
T Consensus 300 ---~~i~~~~p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~----------G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 300 ---ARIPGRDALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGA----------AEASLQVQFHPVGG 360 (361)
T ss_dssp ---EEEECTTCCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTS----------CSSEEEEEECCCSC
T ss_pred ---EEEecCCeeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccC----------CCCcEEEEecCCCC
Confidence 1122222444566677788888886 99999999998 766443111 12245788999986
No 170
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.59 E-value=3.9e-14 Score=138.71 Aligned_cols=227 Identities=10% Similarity=-0.020 Sum_probs=144.5
Q ss_pred EEEEEEecCCCEEEEEeCC---CcEEEEECCCCceeeeeCCCCceE--EEEecCCCEEEEEeCCCcEEEEEcccCcccee
Q 009373 161 VLTVFVLASAKLLFTSGYD---SIVRMWHLEDGFSIASSKPLGCTI--RAVAADKKLLVAGGTDGFIHCWRAVEVLPHLF 235 (536)
Q Consensus 161 V~~v~~~~~~~~l~sgs~d---g~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 235 (536)
+..++|+|+|++|+.+..+ ..|.+||+.+++.......+.... ..++|+++.|+.++.++.|++||+.++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~- 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV- 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE-
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE-
Confidence 7788999999998877543 468888998887654433332222 5678999999999999999999997764211
Q ss_pred cccCcccccceEEeeCCccCEEE---E----------------EE--eCCEEEEE-----ecCCeEEEEeCCCceEeEee
Q 009373 236 DISGSEKQNTQFRLWEHEGPITS---L----------------AL--DLTRIYSG-----SWDMTVRVWDRALLKCLKVL 289 (536)
Q Consensus 236 ~~~~~~~~~~~~~~~~h~~~v~~---l----------------~~--~~~~l~s~-----s~dg~i~iwd~~~~~~~~~~ 289 (536)
....+...... + .+ +++.++.+ ..+..|.+||+.+++.....
T Consensus 117 ------------~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~ 184 (396)
T 3c5m_A 117 ------------IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH 184 (396)
T ss_dssp ------------EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE
T ss_pred ------------EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec
Confidence 11111111111 1 11 33333322 35668999999988876666
Q ss_pred eccccEEEEe--e-cCCEEEEec-C------CcEEEEeCCCCcEEEEEcccc-ccceEEEEEeCCCCEEEEEcCC-----
Q 009373 290 RHSDWVYGLA--P-HDTTVASTS-G------SDVYIWDTNSGCLLTVVNGAH-VGNTKSLARSHTGDFLFTGGED----- 353 (536)
Q Consensus 290 ~~~~~v~~~~--~-~~~~l~~~~-d------~~i~i~d~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~l~tg~~d----- 353 (536)
.+...+..+. | ++..++..+ + ..|.+||+..++... +.... ...+..+.|+|+|++|+.++.+
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 263 (396)
T 3c5m_A 185 QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTD 263 (396)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCC
T ss_pred cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccceEECCCCCEEEEEecCCCCcc
Confidence 6666666554 6 677665544 2 368999987665333 32212 3368889999999987776543
Q ss_pred CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC---CeEEEEe----------------CCCcEEEEECCcc
Q 009373 354 GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF---PWLVSAA----------------GDGKLSLIDVRKL 410 (536)
Q Consensus 354 g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s----------------~dg~i~vwd~~~~ 410 (536)
+.|++||+.++.. ..+..+.+ .. +.|+| .++++++ .++.|++||+.+.
T Consensus 264 ~~l~~~d~~~g~~----~~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 264 RVIYKANPETLEN----EEVMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp EEEEEECTTTCCE----EEEEECCS----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred ceEEEEECCCCCe----EEeeeCCC----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 4499999987632 12222222 22 67754 5666654 3478999998764
No 171
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.54 E-value=5.2e-12 Score=120.13 Aligned_cols=255 Identities=9% Similarity=0.004 Sum_probs=168.2
Q ss_pred CCCcEEEEECCCCceeeeeC------CCCceEEEEecCCC-EEEEEeCCCcEEEEEcccCccceecccCcccccceEEee
Q 009373 178 YDSIVRMWHLEDGFSIASSK------PLGCTIRAVAADKK-LLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLW 250 (536)
Q Consensus 178 ~dg~v~iwd~~~~~~~~~~~------~~~~~v~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 250 (536)
.+++|.++|.++++....+. ........+..++. .+++...++.|.+||..+++ ....+.
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~-------------~~~~i~ 81 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFK-------------EVGRIT 81 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCC-------------EEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccE-------------EEEEcC
Confidence 48999999999998766441 22233444544444 55555567999999998763 223332
Q ss_pred CCccCEEEEEE-eCCEEEEEe-cCCeEEEEeCCCceEeEeeeccc------cEEEEe-ecCCEEEEec--CCcEEEEeCC
Q 009373 251 EHEGPITSLAL-DLTRIYSGS-WDMTVRVWDRALLKCLKVLRHSD------WVYGLA-PHDTTVASTS--GSDVYIWDTN 319 (536)
Q Consensus 251 ~h~~~v~~l~~-~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~------~v~~~~-~~~~~l~~~~--d~~i~i~d~~ 319 (536)
.......+++ .++.++.+. .++.|.+||..+++....+.... ....+. .++.++++.. ++.|.++|+.
T Consensus 82 -~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 82 -GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp -CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETT
T ss_pred -CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECC
Confidence 3456778888 445666666 89999999999999887776333 444454 4444445542 6889999999
Q ss_pred CCcEEEEEccccccceEEEEEeCCCCEEEEEcCC----------CcEEEEEcccCccccccceeeeccCC-CCCeEEEEE
Q 009373 320 SGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGED----------GAIHMYEIINDCTEANVLLVATWIPH-TGPVNSLAF 388 (536)
Q Consensus 320 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~h-~~~v~~l~~ 388 (536)
+++.+..+.. ......+.++|+|++++++..+ +.|.++|..+. .....+... ......+++
T Consensus 161 t~~~~~~i~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~------~v~~~~~~~~g~~p~~la~ 232 (328)
T 3dsm_A 161 TDKVVDELTI--GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF------TVEKQFKFKLGDWPSEVQL 232 (328)
T ss_dssp TTEEEEEEEC--SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT------EEEEEEECCTTCCCEEEEE
T ss_pred CCeEEEEEEc--CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC------eEEEEEecCCCCCceeEEE
Confidence 9998887753 3456788999999977776654 78999999877 333333221 236789999
Q ss_pred cC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEec---CCEEEEe----cCCC
Q 009373 389 EF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIG---ADRIVCG----GEEG 459 (536)
Q Consensus 389 ~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~sg----~~Dg 459 (536)
+| ++|+++.. .|.+||..+....... .+.........+.++ +..+++. ..++
T Consensus 233 ~~d~~~lyv~~~--~v~~~d~~t~~~~~~~-----------------~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~ 293 (328)
T 3dsm_A 233 NGTRDTLYWINN--DIWRMPVEADRVPVRP-----------------FLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQG 293 (328)
T ss_dssp CTTSCEEEEESS--SEEEEETTCSSCCSSC-----------------SBCCCSSCEEEEEECTTTCCEEEEECTTSSSEE
T ss_pred ecCCCEEEEEcc--EEEEEECCCCceeeee-----------------eecCCCCceEEEEEcCCCCeEEEEcccccccCC
Confidence 86 67777654 8999999875321100 001111223344443 3466666 6789
Q ss_pred eEEEEeCCchhhHHH
Q 009373 460 IVRIWNFSQAFEIER 474 (536)
Q Consensus 460 ~i~vW~~~~~~~~~~ 474 (536)
.|.+||.. ++.+.+
T Consensus 294 ~V~v~d~~-g~~~~~ 307 (328)
T 3dsm_A 294 IVYRYSPQ-GKLIDE 307 (328)
T ss_dssp EEEEECTT-CCEEEE
T ss_pred EEEEECCC-CCEEEE
Confidence 99999998 665543
No 172
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.54 E-value=1.1e-10 Score=109.10 Aligned_cols=235 Identities=7% Similarity=-0.012 Sum_probs=158.7
Q ss_pred eeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeee-CCCCceEEEE--ecCCCEEEEEeCCCcEEEEEcc
Q 009373 152 DVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASS-KPLGCTIRAV--AADKKLLVAGGTDGFIHCWRAV 228 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~-~~~~~~v~~~--~~~~~~l~sg~~dg~i~vwd~~ 228 (536)
..+..+...+.+++++++|+++++...++.|.+||.. ++..... ......+..+ .+++.++++...++.|..|+..
T Consensus 8 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 8 LNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp EECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 3455677889999999999988877778999999988 5543322 2233444444 4778877777778899999874
Q ss_pred cCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEee-e-ccccEEEEe--ecC
Q 009373 229 EVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVL-R-HSDWVYGLA--PHD 302 (536)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~-~~~~v~~~~--~~~ 302 (536)
+.. ....+......+.++++ ++..+++...++.|..||. +++..... . ....+..+. +++
T Consensus 87 -g~~------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g 152 (299)
T 2z2n_A 87 -GII------------KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDN 152 (299)
T ss_dssp -SCE------------EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS
T ss_pred -CcE------------EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCC
Confidence 211 11112224457888888 3455666666889999998 55443322 1 334566665 677
Q ss_pred CEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCC
Q 009373 303 TTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTG 381 (536)
Q Consensus 303 ~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~ 381 (536)
.++++.. ++.|..||. +++............+..++++++|.+.++...++.|.+||. ++.. .......+..
T Consensus 153 ~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~-----~~~~~~~~~~ 225 (299)
T 2z2n_A 153 ALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI-----TEFKIPTPNA 225 (299)
T ss_dssp CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE-----EEEECSSTTC
T ss_pred CEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE-----EEEECCCCCC
Confidence 7877776 688999999 666554322234557889999999998777777889999998 5421 1122334567
Q ss_pred CeEEEEEcC-CeEEEEe-CCCcEEEEECC
Q 009373 382 PVNSLAFEF-PWLVSAA-GDGKLSLIDVR 408 (536)
Q Consensus 382 ~v~~l~~~~-~~l~s~s-~dg~i~vwd~~ 408 (536)
.+.++++++ ..|..+. .++.|.+||..
T Consensus 226 ~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 226 RPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp CEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred CceeEEECCCCCEEEeccCCceEEEECCC
Confidence 789999976 3455554 67899999973
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.53 E-value=5.3e-12 Score=121.68 Aligned_cols=235 Identities=12% Similarity=0.036 Sum_probs=157.1
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEeC----------CCcEEEEECCCCceeeeeCCC--------CceEEEEecCCCE
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSGY----------DSIVRMWHLEDGFSIASSKPL--------GCTIRAVAADKKL 212 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~----------dg~v~iwd~~~~~~~~~~~~~--------~~~v~~~~~~~~~ 212 (536)
+..+..+..+ .++|+|+++++++++. +++|.+||+.+++.+..+... ...-.+++|+|++
T Consensus 44 ~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 44 LGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp EEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSE
T ss_pred EEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCE
Confidence 4566666666 8999999999998863 678999999999888776422 2234678899999
Q ss_pred EEEEeC--CCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--e-CCEEEEEecCCeEEEEeCCC-ceEe
Q 009373 213 LVAGGT--DGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--D-LTRIYSGSWDMTVRVWDRAL-LKCL 286 (536)
Q Consensus 213 l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~-~~~l~s~s~dg~i~iwd~~~-~~~~ 286 (536)
|+++.. +++|.+||+.++. ....+..+.+. ..+.+ + +..+++.+.||.+.+|+... ++..
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~-------------~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~ 187 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGD-------------YVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVA 187 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTE-------------EEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEE
T ss_pred EEEECCCCCCeEEEEECCCCc-------------EEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEe
Confidence 998874 5899999997753 22220111111 11223 2 35788899999999999865 5444
Q ss_pred Ee------ee-ccccEE-EEeecCCEEEEec-CCcEEEEeCCCCcEE--EEEcc-c----c----ccceEEEEEeCCCCE
Q 009373 287 KV------LR-HSDWVY-GLAPHDTTVASTS-GSDVYIWDTNSGCLL--TVVNG-A----H----VGNTKSLARSHTGDF 346 (536)
Q Consensus 287 ~~------~~-~~~~v~-~~~~~~~~l~~~~-d~~i~i~d~~~~~~~--~~~~~-~----~----~~~i~~l~~~~~~~~ 346 (536)
.. +. ...++. ...+++..++..+ ++.+.++|+..+... ..+.. . + ......++++|+++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~ 267 (361)
T 2oiz_A 188 SQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGR 267 (361)
T ss_dssp EEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTE
T ss_pred eeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCe
Confidence 11 11 111211 1135565555555 789999999765422 22110 0 0 111223789999887
Q ss_pred EEEEcC-----------CCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcc
Q 009373 347 LFTGGE-----------DGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 347 l~tg~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~ 410 (536)
++++.. .+.|.+||+.+. +.+.++..+. +.+++|+| ++|++++. +.|.+||..++
T Consensus 268 lyv~~~~~~~~~~~~~~~~~v~viD~~t~------~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 268 MYVFMHPDGKEGTHKFPAAEIWVMDTKTK------QRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEEEESSCCTTCTTCCCSEEEEEETTTT------EEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EEEEEccCCCcccccCCCceEEEEECCCC------cEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 776543 347999999988 6677777666 89999986 68888876 99999999885
No 174
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.53 E-value=7.1e-12 Score=119.16 Aligned_cols=229 Identities=10% Similarity=-0.043 Sum_probs=157.6
Q ss_pred cEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCC-ceEEEEecCCCEEEEEeCCCcEEEEEcccCccceeccc
Q 009373 160 AVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLG-CTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDIS 238 (536)
Q Consensus 160 ~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 238 (536)
....+.+. +++++++...++.|.+||..+++.+.++.... ..-.++++++..+++...++.|.+||..++..
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~------ 117 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI------ 117 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEE------
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeE------
Confidence 45667674 45566666678999999999999988875332 23345557775444444899999999977631
Q ss_pred CcccccceEEeeCCc-----cCEEEEEEeCCEEEEEe--cCCeEEEEeCCCceEeEeeeccccEEE--EeecCCEEEEec
Q 009373 239 GSEKQNTQFRLWEHE-----GPITSLALDLTRIYSGS--WDMTVRVWDRALLKCLKVLRHSDWVYG--LAPHDTTVASTS 309 (536)
Q Consensus 239 ~~~~~~~~~~~~~h~-----~~v~~l~~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~ 309 (536)
...+.... .....++++++.++.+. .++.|.++|..+++....+........ +.+++++++++.
T Consensus 118 -------~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 118 -------TGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITD 190 (328)
T ss_dssp -------EEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBC
T ss_pred -------EEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEEC
Confidence 11121111 13445666777777766 489999999999998888773333333 447888777766
Q ss_pred -C----------CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccC
Q 009373 310 -G----------SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIP 378 (536)
Q Consensus 310 -d----------~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 378 (536)
+ +.|.++|..+++....+..........++++|+++.|+++.. .|.+||..++... ....+..
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~----~~~~~~~ 264 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVP----VRPFLEF 264 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCC----SSCSBCC
T ss_pred CCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCcee----eeeeecC
Confidence 3 689999999998877764322347899999999999888765 8999999877321 1111122
Q ss_pred CCCCeEEEEEcC--CeEEEE-----eCCCcEEEEECC
Q 009373 379 HTGPVNSLAFEF--PWLVSA-----AGDGKLSLIDVR 408 (536)
Q Consensus 379 h~~~v~~l~~~~--~~l~s~-----s~dg~i~vwd~~ 408 (536)
+.....+++++| ..|+.+ ..++.|.+||..
T Consensus 265 ~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 265 RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 246788999986 444444 468899999987
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.52 E-value=8.3e-12 Score=119.76 Aligned_cols=253 Identities=9% Similarity=0.059 Sum_probs=158.6
Q ss_pred ccEEEEEEecCCCEEEEEe---------CCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCC---Cc--EEE
Q 009373 159 EAVLTVFVLASAKLLFTSG---------YDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTD---GF--IHC 224 (536)
Q Consensus 159 ~~V~~v~~~~~~~~l~sgs---------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~d---g~--i~v 224 (536)
..+...++ +|+.++... .++.|.+||+.+++... + .......++|+|+.|+.++.+ +. |.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l--~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~ 89 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I--ENATMPRISPDGKKIAFMRANEEKKVSEIWV 89 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E--ESCEEEEECTTSSEEEEEEEETTTTEEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c--ccCCCeEECCCCCEEEEEEeccCCCcceEEE
Confidence 34566667 787776542 36789999999886543 3 334456788999999887754 33 777
Q ss_pred EEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecC---------------------------CeE
Q 009373 225 WRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWD---------------------------MTV 275 (536)
Q Consensus 225 wd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~d---------------------------g~i 275 (536)
|++.++. ...+..+.. +..+.| +++.|+.++.+ ..|
T Consensus 90 ~~~~~g~--------------~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 154 (347)
T 2gop_A 90 ADLETLS--------------SKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTF 154 (347)
T ss_dssp EETTTTE--------------EEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEE
T ss_pred EECCCCc--------------eEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceE
Confidence 7776542 122222333 888999 77888877643 579
Q ss_pred EEEeCCCceEeEeeeccccEEEE--eecCCEEEEec-C------C-cEEEEeCCCCcEEEEEccccccceEEEEEeCCCC
Q 009373 276 RVWDRALLKCLKVLRHSDWVYGL--APHDTTVASTS-G------S-DVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGD 345 (536)
Q Consensus 276 ~iwd~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~-d------~-~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 345 (536)
.+||+.+++.+..+... .+..+ +|++ +++++. + . ...+|.+.+++. ..+.. + ..+..+ +|+|+
T Consensus 155 ~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~-~-~~~~~~--spdg~ 227 (347)
T 2gop_A 155 WIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFE-K-VSFYAV--DSDGE 227 (347)
T ss_dssp EEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEE-E-ESEEEE--EECSS
T ss_pred EEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEecc-C-cceeeE--CCCCC
Confidence 99999988774444332 44444 4788 666664 3 1 334444335543 33332 3 555554 99999
Q ss_pred EEEEEcCC--------CcEEEEEcccCccccccceeeeccCCCCCeEE-EEEcCCeEEEEeCCCcEEEEECCcccccCCC
Q 009373 346 FLFTGGED--------GAIHMYEIINDCTEANVLLVATWIPHTGPVNS-LAFEFPWLVSAAGDGKLSLIDVRKLLRSGRP 416 (536)
Q Consensus 346 ~l~tg~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~-l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~ 416 (536)
.|+.++.+ ..|.+|| ++ ........|...+.. +.|+..++++++.++.+++| +.++.
T Consensus 228 ~l~~~~~~~~~~~~~~~~l~~~d--~~------~~~~l~~~~~~~~~~~~~~sdg~~~~~~~~~~~~l~-~~~g~----- 293 (347)
T 2gop_A 228 RILLYGKPEKKYMSEHNKLYIYD--GK------EVMGILDEVDRGVGQAKIKDGKVYFTLFEEGSVNLY-IWDGE----- 293 (347)
T ss_dssp CEEEEECCSSSCCCSSCEEEEEC--SS------CEEESSTTCCSEEEEEEEETTEEEEEEEETTEEEEE-EESSS-----
T ss_pred EEEEEEccccCCccccceEEEEC--CC------ceEeccccCCcccCCccEEcCcEEEEEecCCcEEEE-EcCCc-----
Confidence 88877654 3577777 33 223333456677886 88873377888899999999 86321
Q ss_pred CCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeE-EEEeCC
Q 009373 417 TSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIV-RIWNFS 467 (536)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i-~vW~~~ 467 (536)
... +..+...+.++++++..+++++.++.. .+|.++
T Consensus 294 --------------~~~-~~~~~~~v~~~~~s~~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 294 --------------IKP-IAKGRHWIMGFDVDEIVVYLKETATRLRELFTWD 330 (347)
T ss_dssp --------------EEE-EECSSSEEEEEEESSSEEEEEECSSSCCEEEEES
T ss_pred --------------eEE-EecCCCeEEeeeeeCcEEEEEcCCCChHHheEeC
Confidence 011 122245566777666666677777765 778775
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.52 E-value=2.3e-11 Score=113.27 Aligned_cols=230 Identities=10% Similarity=0.121 Sum_probs=148.7
Q ss_pred EEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEe--CCEEEEEec--CCeEEEEe
Q 009373 204 RAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD--LTRIYSGSW--DMTVRVWD 279 (536)
Q Consensus 204 ~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~--dg~i~iwd 279 (536)
.++.+++.++++...++.|.+||........+...+ ...++...+..++++ .+.++.+.. ++.|.+||
T Consensus 35 v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~--------~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECG--------KRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBS--------SSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred EEECCCCCEEEEECCCCEEEEECCCCcEEEEecccC--------CCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 445688888888889999999997632110000000 001344678889982 345555553 89999999
Q ss_pred CCCceEeEeee--ccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEcc-ccccceEEEEEeCCCCEEEEEcCC
Q 009373 280 RALLKCLKVLR--HSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNG-AHVGNTKSLARSHTGDFLFTGGED 353 (536)
Q Consensus 280 ~~~~~~~~~~~--~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~tg~~d 353 (536)
.+++.+..+. +...+.++. ++++++++.. ++.|.+||.. ++.+..+.. ++...+..++++|+|+++++...+
T Consensus 107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 184 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA 184 (286)
T ss_dssp -TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG
T ss_pred -CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCC
Confidence 5677666664 334566665 7888887776 6889999964 555555532 344578999999999988888889
Q ss_pred CcEEEEEcccCccccccceeeecc--CCCCCeEEEEEcC--CeEEEEeCCC-cEEEEECCcccccCCCCCCCceeeEEee
Q 009373 354 GAIHMYEIINDCTEANVLLVATWI--PHTGPVNSLAFEF--PWLVSAAGDG-KLSLIDVRKLLRSGRPTSGKRVSRVIEV 428 (536)
Q Consensus 354 g~i~iwd~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~~--~~l~s~s~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 428 (536)
+.|++||.... .+..+. ++...+.++++++ .++++...++ .|.+||.... .+..+..
T Consensus 185 ~~i~~~~~~g~-------~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~----------~~~~~~~- 246 (286)
T 1q7f_A 185 HCVKVFNYEGQ-------YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ----------LISALES- 246 (286)
T ss_dssp TEEEEEETTCC-------EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC----------EEEEEEE-
T ss_pred CEEEEEcCCCC-------EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC----------EEEEEcc-
Confidence 99999997433 233333 3346789999976 5666666665 9999996421 1111100
Q ss_pred CCCeeeeccccccE--EEEEecCCEEEEecCCCeEEEEeCCch
Q 009373 429 EPPQRMLHGFECNL--LSVDIGADRIVCGGEEGIVRIWNFSQA 469 (536)
Q Consensus 429 ~~~~~~~~~~~~~v--~~~~~~~~~l~sg~~Dg~i~vW~~~~~ 469 (536)
....... .+++++++++++ +.|+.|++|++...
T Consensus 247 -------~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 247 -------KVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp -------SSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred -------cCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 1111123 344455556666 56999999998764
No 177
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.52 E-value=6.8e-13 Score=139.89 Aligned_cols=240 Identities=11% Similarity=-0.083 Sum_probs=160.1
Q ss_pred CccccEEEEEEecCCCEEE-----EEeCCCcEEEEECCCCcee-ee-eCCCCceEEEEecCCCEEEEEeCCCc-------
Q 009373 156 GHTEAVLTVFVLASAKLLF-----TSGYDSIVRMWHLEDGFSI-AS-SKPLGCTIRAVAADKKLLVAGGTDGF------- 221 (536)
Q Consensus 156 ~h~~~V~~v~~~~~~~~l~-----sgs~dg~v~iwd~~~~~~~-~~-~~~~~~~v~~~~~~~~~l~sg~~dg~------- 221 (536)
+|...+.+++|||||++|| .|+.+.+|++||+.+++.+ .. +......-.+++|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 5677899999999999998 4455678999999999865 22 22222245678899999999998876
Q ss_pred ------EEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCC----eEEEEeCCCceEeEee
Q 009373 222 ------IHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDM----TVRVWDRALLKCLKVL 289 (536)
Q Consensus 222 ------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg----~i~iwd~~~~~~~~~~ 289 (536)
|++|++.++.. ....+.....|...+.++.| ++++|+.++.++ .|.+||..+++.....
T Consensus 198 ~~~~~~v~~~~l~t~~~---------~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~ 268 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPS---------KDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLV 268 (695)
T ss_dssp GGGGCEEEEEETTSCGG---------GCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEE
T ss_pred CCCCCEEEEEECCCCch---------hceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEee
Confidence 99999977631 01122233345567888888 778888777666 6777777666544444
Q ss_pred eccccEEE-EeecCCEEEEec----CCcEEEEeCCCCcE--EEEEcccc-ccceEEEEEeCCCCEEEEEcCCCcEEEEEc
Q 009373 290 RHSDWVYG-LAPHDTTVASTS----GSDVYIWDTNSGCL--LTVVNGAH-VGNTKSLARSHTGDFLFTGGEDGAIHMYEI 361 (536)
Q Consensus 290 ~~~~~v~~-~~~~~~~l~~~~----d~~i~i~d~~~~~~--~~~~~~~~-~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~ 361 (536)
.+...+.. +.+++.+++.+. ++.|.+||+.++.. ...+...+ ...+..++++ ++.++++...|+..++|.+
T Consensus 269 ~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 269 KGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp ECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred cCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 44433333 336777444443 36799999988753 23332223 4567888888 6778888999999888877
Q ss_pred ccCccccccceeeeccCC-CCCeEEEEEcC--CeEE-EEeC---CCcEEEEECCcc
Q 009373 362 INDCTEANVLLVATWIPH-TGPVNSLAFEF--PWLV-SAAG---DGKLSLIDVRKL 410 (536)
Q Consensus 362 ~~~~~~~~~~~~~~~~~h-~~~v~~l~~~~--~~l~-s~s~---dg~i~vwd~~~~ 410 (536)
.... .....+..+ .+.|..+++++ +.++ +.+. .++|++||+.++
T Consensus 348 ~~~g-----~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 348 TLKG-----KPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp ETTC-----CEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred eCCC-----CeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 6321 223334444 56677777765 3444 3322 478999998764
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.50 E-value=8.4e-12 Score=131.92 Aligned_cols=241 Identities=9% Similarity=-0.067 Sum_probs=162.2
Q ss_pred CccccEEEEEEecCCCEEEEEeCCC-----cEEEEECCCCceeeeeC-CCCceEEEEecCCCEEEEEeCCCc--------
Q 009373 156 GHTEAVLTVFVLASAKLLFTSGYDS-----IVRMWHLEDGFSIASSK-PLGCTIRAVAADKKLLVAGGTDGF-------- 221 (536)
Q Consensus 156 ~h~~~V~~v~~~~~~~~l~sgs~dg-----~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~l~sg~~dg~-------- 221 (536)
+|...+..++|+|||++||.++.++ .|++||+.+++.+.... .....-.+++|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccc
Confidence 4556789999999999998776543 89999999998765322 222234678899999999988766
Q ss_pred --------EEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEec-----CCeEEEEeCCC----
Q 009373 222 --------IHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSW-----DMTVRVWDRAL---- 282 (536)
Q Consensus 222 --------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~-----dg~i~iwd~~~---- 282 (536)
|++|++.++... ...+.....|...+..+.| ++++|+.++. +..|.+||+.+
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~---------~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 272 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSE---------DILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNG 272 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGG---------CEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSS
T ss_pred cccCCCCEEEEEECCCCccc---------ceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccc
Confidence 999998765310 0112222235556778888 7788887765 67899999976
Q ss_pred --ce-EeEeee-ccccE-EEEeecCCEEEEec--C---CcEEEEeCCCCc--EEEEEccccc-cceEEEEEeCCCCEEEE
Q 009373 283 --LK-CLKVLR-HSDWV-YGLAPHDTTVASTS--G---SDVYIWDTNSGC--LLTVVNGAHV-GNTKSLARSHTGDFLFT 349 (536)
Q Consensus 283 --~~-~~~~~~-~~~~v-~~~~~~~~~l~~~~--d---~~i~i~d~~~~~--~~~~~~~~~~-~~i~~l~~~~~~~~l~t 349 (536)
+. ....+. +...+ ..+.+++..|+..+ + ..|.+||+.++. ....+...+. ..+..+.|++++.++++
T Consensus 273 ~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~ 352 (710)
T 2xdw_A 273 ITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLC 352 (710)
T ss_dssp SCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEE
T ss_pred cCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEE
Confidence 42 233333 33333 34568888766554 2 359999998874 2233432223 36888999988888888
Q ss_pred EcCCCc--EEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEE-EEeC---CCcEEEEECCccc
Q 009373 350 GGEDGA--IHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLV-SAAG---DGKLSLIDVRKLL 411 (536)
Q Consensus 350 g~~dg~--i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~-s~s~---dg~i~vwd~~~~~ 411 (536)
...|+. |.+||+.++ ..+..+..+.+.|..+.+++ +.++ +.+. .+.|++||+.++.
T Consensus 353 ~~~~g~~~l~~~~~~~g------~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 353 YLHDVKNTLQLHDLATG------ALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEETTEEEEEEEETTTC------CEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEECCEEEEEEEECCCC------CEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 888886 455565455 34455666777888898875 3444 3333 4789999997754
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.49 E-value=1.7e-11 Score=114.79 Aligned_cols=235 Identities=11% Similarity=0.013 Sum_probs=158.0
Q ss_pred ceeeeeCccccEEEEEEecCCC-EEEEEeCCCcEEEEECCCCceeeeeCCCCceE--EEEecCCCEEEEEeCCCcEEEEE
Q 009373 150 SIDVLYGHTEAVLTVFVLASAK-LLFTSGYDSIVRMWHLEDGFSIASSKPLGCTI--RAVAADKKLLVAGGTDGFIHCWR 226 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~l~sg~~dg~i~vwd 226 (536)
.+..+..+.....+++|+|+++ +++++..++.|..|+..++ ...+..+...+ .++.++++++++...++.|.+||
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 4567777778889999999998 8888889999999999887 44444444444 44558888887777789999999
Q ss_pred cccCccceecccCcccccceEEeeC-CccCEEEEEE--eCCEEEE----Ee-------------cCCeEEEEeCCCceEe
Q 009373 227 AVEVLPHLFDISGSEKQNTQFRLWE-HEGPITSLAL--DLTRIYS----GS-------------WDMTVRVWDRALLKCL 286 (536)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~--~~~~l~s----~s-------------~dg~i~iwd~~~~~~~ 286 (536)
..++....+. ....+ ....+.++++ +++.+++ |+ ..+.|..++.. ++..
T Consensus 97 ~~~g~~~~~~----------~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~ 165 (296)
T 3e5z_A 97 EPGGEWESIA----------DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS 165 (296)
T ss_dssp STTCCEEEEE----------CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE
T ss_pred CCCCcEEEEe----------eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE
Confidence 8666421110 00001 1224556777 5566666 33 13466666665 4443
Q ss_pred EeeeccccEEEEe--ecCCEEEEec-CCcEEEEeCC-CCcE---EEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEE
Q 009373 287 KVLRHSDWVYGLA--PHDTTVASTS-GSDVYIWDTN-SGCL---LTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMY 359 (536)
Q Consensus 287 ~~~~~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~-~~~~---~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iw 359 (536)
....+......++ ++++.+++.. ++.|.+||+. +++. ...+ ..+...+..++++++|++.++. ++.|.+|
T Consensus 166 ~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~ 242 (296)
T 3e5z_A 166 APIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVL 242 (296)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEE
T ss_pred EeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEE
Confidence 3333444455555 8898886666 6899999987 5554 3344 3455667889999999876666 7889999
Q ss_pred EcccCccccccceeeeccCCCCCeEEEEEc-C--CeEEEEeCCCcEEEEECCc
Q 009373 360 EIINDCTEANVLLVATWIPHTGPVNSLAFE-F--PWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 360 d~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~--~~l~s~s~dg~i~vwd~~~ 409 (536)
|.. + ..+..+..+.. +++++|. + +.|++++.++ +.-++.++
T Consensus 243 ~~~-g------~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~ 286 (296)
T 3e5z_A 243 TPD-G------DELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNV 286 (296)
T ss_dssp CTT-S------CEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSC
T ss_pred CCC-C------CEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccc
Confidence 976 4 34555566666 8999994 4 5788888764 44455544
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.48 E-value=7.8e-12 Score=119.98 Aligned_cols=220 Identities=11% Similarity=0.005 Sum_probs=145.6
Q ss_pred ccEEEEEEecCCCEEEEEeCC---C--cEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCC--------------
Q 009373 159 EAVLTVFVLASAKLLFTSGYD---S--IVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTD-------------- 219 (536)
Q Consensus 159 ~~V~~v~~~~~~~~l~sgs~d---g--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~d-------------- 219 (536)
..+..++|+|||+.|+.++.+ + .|.+|++.+++.............+++|+++.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEECCCC---------CC
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEccCCCcCCcEEEcccc
Confidence 567889999999999887754 3 388889888876544433223344567999988887643
Q ss_pred -------------CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCC-------eEEE
Q 009373 220 -------------GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDM-------TVRV 277 (536)
Q Consensus 220 -------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg-------~i~i 277 (536)
..|.+||+.++. ....+.. . .+..+.| ++ .+++++.++ ...+
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~~~~~-------------~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l 202 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDTESEE-------------VIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDI 202 (347)
T ss_dssp CC---------CEEEEEEEETTTTE-------------EEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEE
T ss_pred eeecCcccccCccceEEEEECCCCe-------------EEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccE
Confidence 568888886653 1122222 2 5677788 45 666665542 3344
Q ss_pred EeCCCceEeEeeeccccEEEEeecCCEEEEec-C--------CcEEEEeCCCCcEEEEEccccccceEE-EEEeCCCCEE
Q 009373 278 WDRALLKCLKVLRHSDWVYGLAPHDTTVASTS-G--------SDVYIWDTNSGCLLTVVNGAHVGNTKS-LARSHTGDFL 347 (536)
Q Consensus 278 wd~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-d--------~~i~i~d~~~~~~~~~~~~~~~~~i~~-l~~~~~~~~l 347 (536)
|.+.+++......+ ..+..++|+|+.++..+ + ..|.+|| +++. ..+..++...+.. +.|+ ++ ++
T Consensus 203 ~~~d~~~~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~~~~~~~~~~~~s-dg-~~ 276 (347)
T 2gop_A 203 YIWEDGKEEKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV-MGILDEVDRGVGQAKIKD-GK-VY 276 (347)
T ss_dssp EEEETTEEEEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE-EESSTTCCSEEEEEEEET-TE-EE
T ss_pred EEeCCCceEEeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCce-EeccccCCcccCCccEEc-Cc-EE
Confidence 44435554433335 56666689998877655 3 3588888 5554 3343456777886 8999 88 89
Q ss_pred EEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEEeCCCcE-EEEECC
Q 009373 348 FTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAAGDGKL-SLIDVR 408 (536)
Q Consensus 348 ~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i-~vwd~~ 408 (536)
++++.++.+++| +.++ .. ..+..+...|.+++|++.++++++.++.. .+|.+.
T Consensus 277 ~~~~~~~~~~l~-~~~g------~~-~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 277 FTLFEEGSVNLY-IWDG------EI-KPIAKGRHWIMGFDVDEIVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEETTEEEEE-EESS------SE-EEEECSSSEEEEEEESSSEEEEEECSSSCCEEEEES
T ss_pred EEEecCCcEEEE-EcCC------ce-EEEecCCCeEEeeeeeCcEEEEEcCCCChHHheEeC
Confidence 999999999999 8743 22 23334577899999988656677777654 677654
No 181
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.47 E-value=9.1e-11 Score=111.59 Aligned_cols=230 Identities=13% Similarity=0.032 Sum_probs=154.1
Q ss_pred EEEEecCCCEEEEEeCC------------------------CcEEEEEcccCccceecccCcccccceEEee-CCccCEE
Q 009373 203 IRAVAADKKLLVAGGTD------------------------GFIHCWRAVEVLPHLFDISGSEKQNTQFRLW-EHEGPIT 257 (536)
Q Consensus 203 v~~~~~~~~~l~sg~~d------------------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~ 257 (536)
-+++.++|+++++...+ ++|.+||..++.. ...+. ++.....
T Consensus 28 ~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~-------------~~~~~~~~~~~p~ 94 (329)
T 3fvz_A 28 GVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI-------------LQSSGKNLFYLPH 94 (329)
T ss_dssp EEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE-------------EEEECTTTCSSEE
T ss_pred EEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE-------------EeccCCCccCCce
Confidence 34555778877777766 5789999876531 11221 3445788
Q ss_pred EEEE--eCCEEEEEecCCeEEEEeCCCce-EeEeee----------ccccEEEEe--e-cCCEEEEec--CCcEEEEeCC
Q 009373 258 SLAL--DLTRIYSGSWDMTVRVWDRALLK-CLKVLR----------HSDWVYGLA--P-HDTTVASTS--GSDVYIWDTN 319 (536)
Q Consensus 258 ~l~~--~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~----------~~~~v~~~~--~-~~~~l~~~~--d~~i~i~d~~ 319 (536)
.+++ +++.+++.+.++.|++||..... .+..+. +......++ + ++.++++.+ ++.|++|| .
T Consensus 95 gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~ 173 (329)
T 3fvz_A 95 GLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-P 173 (329)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-T
T ss_pred EEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-C
Confidence 8999 56777888888999999986542 344442 122455665 6 788888874 78999999 5
Q ss_pred CCcEEEEEcc---------ccccceEEEEEeCC-CCEEEEEcCCCcEEEEEcccCccccccceeeec--cCCCCCeEEEE
Q 009373 320 SGCLLTVVNG---------AHVGNTKSLARSHT-GDFLFTGGEDGAIHMYEIINDCTEANVLLVATW--IPHTGPVNSLA 387 (536)
Q Consensus 320 ~~~~~~~~~~---------~~~~~i~~l~~~~~-~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~--~~h~~~v~~l~ 387 (536)
+++.+..+.. ++...+..++++|+ +.++++...++.|++||..++ ..+..+ ..+...+.+++
T Consensus 174 ~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G------~~~~~~~~~~~~~~~~~~~ 247 (329)
T 3fvz_A 174 SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK------EFVREIKHASFGRNVFAIS 247 (329)
T ss_dssp TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC------CEEEEECCTTTTTCEEEEE
T ss_pred CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC------cEEEEEeccccCCCcceee
Confidence 6777776631 12334899999998 778888888999999999866 344444 35667888999
Q ss_pred EcCCeEEEEeC--------CCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEec--CCEEEEecC
Q 009373 388 FEFPWLVSAAG--------DGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIG--ADRIVCGGE 457 (536)
Q Consensus 388 ~~~~~l~s~s~--------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~sg~~ 457 (536)
|+|..++.... +..|++||+.++...... .. ..++......++++ +..+++...
T Consensus 248 ~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~------------~~----~~~~~~~p~~ia~~~dG~lyvad~~ 311 (329)
T 3fvz_A 248 YIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF------------KP----VRKHFDMPHDIVASEDGTVYIGDAH 311 (329)
T ss_dssp EETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE------------CC----SSSCCSSEEEEEECTTSEEEEEESS
T ss_pred ecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE------------cC----CCCccCCeeEEEECCCCCEEEEECC
Confidence 98865555432 347999998764322110 00 01223334455554 458888999
Q ss_pred CCeEEEEeCCc
Q 009373 458 EGIVRIWNFSQ 468 (536)
Q Consensus 458 Dg~i~vW~~~~ 468 (536)
++.|++|++..
T Consensus 312 ~~~I~~~~~~~ 322 (329)
T 3fvz_A 312 TNTVWKFTLTE 322 (329)
T ss_dssp SCCEEEEEEEE
T ss_pred CCEEEEEeCCc
Confidence 99999999865
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.47 E-value=8.6e-11 Score=111.96 Aligned_cols=232 Identities=9% Similarity=-0.027 Sum_probs=151.2
Q ss_pred ceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEE--ecCCCEEEEEeCC----CcEE
Q 009373 150 SIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAV--AADKKLLVAGGTD----GFIH 223 (536)
Q Consensus 150 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~--~~~~~~l~sg~~d----g~i~ 223 (536)
....+.++...+.+++|+|++++++++..++.|.+||.++++.......+...+.++ .++++++++...+ +.|.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEE
T ss_pred eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEE
Confidence 355677788888999999999988889999999999999887655443344445444 5788877777666 6899
Q ss_pred EEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEec------CCeEEEEeCCCceEeEeeeccccE
Q 009373 224 CWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSW------DMTVRVWDRALLKCLKVLRHSDWV 295 (536)
Q Consensus 224 vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~v 295 (536)
+||..++.... ......+...+.++++ ++..+++... .+.|..+|..+++..........+
T Consensus 116 ~~d~~~~~~~~-----------~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 184 (333)
T 2dg1_A 116 AATENGDNLQD-----------IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVA 184 (333)
T ss_dssp EECTTSCSCEE-----------EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSE
T ss_pred EEeCCCCEEEE-----------EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcc
Confidence 99987653210 0000123457888998 4555555443 356777776665544433333345
Q ss_pred EEEe--ecCCEEEE-ec-CCcEEEEeCCC-CcEEEEE-----c--cccccceEEEEEeCCCCEEEEEcCCCcEEEEEccc
Q 009373 296 YGLA--PHDTTVAS-TS-GSDVYIWDTNS-GCLLTVV-----N--GAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIIN 363 (536)
Q Consensus 296 ~~~~--~~~~~l~~-~~-d~~i~i~d~~~-~~~~~~~-----~--~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~ 363 (536)
..+. ++++.++. .. ++.|.+||+.+ +..+..+ . .++ ..+..++++++|.++++...++.|.+||..
T Consensus 185 ~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~- 262 (333)
T 2dg1_A 185 NGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR- 262 (333)
T ss_dssp EEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-
T ss_pred cceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-
Confidence 5554 78875544 44 68999999964 3322211 0 111 467889999999988888788999999974
Q ss_pred CccccccceeeeccCC------CCCeEEEEEcC--CeEEEEeCCC
Q 009373 364 DCTEANVLLVATWIPH------TGPVNSLAFEF--PWLVSAAGDG 400 (536)
Q Consensus 364 ~~~~~~~~~~~~~~~h------~~~v~~l~~~~--~~l~s~s~dg 400 (536)
+ ..+..+..+ ...+.+++|++ ..|+.++.++
T Consensus 263 g------~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 263 G------YPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp S------CEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred C------CEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 3 223333222 23688999975 4676666553
No 183
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.47 E-value=4.4e-11 Score=116.15 Aligned_cols=265 Identities=8% Similarity=0.027 Sum_probs=173.9
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeeeeCCC----------CceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccC
Q 009373 170 AKLLFTSGYDSIVRMWHLEDGFSIASSKPL----------GCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISG 239 (536)
Q Consensus 170 ~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~----------~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 239 (536)
+..++.++.++.|..+|.++|+.+...... .........++..+++++.++.|..+|..+++..
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~------ 126 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVA------ 126 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEE------
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEE------
Confidence 667888888999999999999988766442 1222334456788899999999999999887521
Q ss_pred cccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEeeeccccEE------EEeecCCEEEEec-CCc
Q 009373 240 SEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVLRHSDWVY------GLAPHDTTVASTS-GSD 312 (536)
Q Consensus 240 ~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~------~~~~~~~~l~~~~-d~~ 312 (536)
................++.++.++.++.|..+|..+++.+........+. .....+..++.+. ++.
T Consensus 127 -------W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~ 199 (376)
T 3q7m_A 127 -------WQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGR 199 (376)
T ss_dssp -------EEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTE
T ss_pred -------EEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCE
Confidence 11111111111223457788899999999999999999988877433332 1122344555555 889
Q ss_pred EEEEeCCCCcEEEEEccccccc---eEE---EEEeC--CCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeE
Q 009373 313 VYIWDTNSGCLLTVVNGAHVGN---TKS---LARSH--TGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVN 384 (536)
Q Consensus 313 i~i~d~~~~~~~~~~~~~~~~~---i~~---l~~~~--~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~ 384 (536)
+..+|..+++.+.......... +.. +...| .+..+++++.+|.+..+|..++. .+.... .....
T Consensus 200 l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~------~~w~~~--~~~~~ 271 (376)
T 3q7m_A 200 VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ------IMWKRE--LGSVN 271 (376)
T ss_dssp EEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCC------EEEEEC--CCCEE
T ss_pred EEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCc------EEeecc--CCCCC
Confidence 9999999999887764221100 000 10111 25678888889999999998883 332222 23455
Q ss_pred EEEEcCCeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEEE
Q 009373 385 SLAFEFPWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIW 464 (536)
Q Consensus 385 ~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW 464 (536)
.+......++.++.++.|..+|..++...+..... . ..........+..|+.++.+|.|.++
T Consensus 272 ~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~----------------~--~~~~~~~~~~~~~l~v~~~~g~l~~~ 333 (376)
T 3q7m_A 272 DFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDL----------------L--HRLLTSPVLYNGNLVVGDSEGYLHWI 333 (376)
T ss_dssp EEEEETTEEEEEETTCCEEEEETTTCCEEEEECTT----------------T--TSCCCCCEEETTEEEEECTTSEEEEE
T ss_pred CceEECCEEEEEcCCCeEEEEECCCCcEEEeeccc----------------C--CCcccCCEEECCEEEEEeCCCeEEEE
Confidence 66777889999999999999999886544321100 0 00111122346788899999999999
Q ss_pred eCCchhhHH
Q 009373 465 NFSQAFEIE 473 (536)
Q Consensus 465 ~~~~~~~~~ 473 (536)
|..+++.+.
T Consensus 334 d~~tG~~~~ 342 (376)
T 3q7m_A 334 NVEDGRFVA 342 (376)
T ss_dssp ETTTCCEEE
T ss_pred ECCCCcEEE
Confidence 999987654
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.47 E-value=2.3e-11 Score=115.92 Aligned_cols=231 Identities=11% Similarity=0.070 Sum_probs=153.0
Q ss_pred ccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceE--EEEecCCCEEEEEeCCCcEEEEEcccCccceec
Q 009373 159 EAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTI--RAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFD 236 (536)
Q Consensus 159 ~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 236 (536)
..|.++.|++++..++..+.++.++.| .++....+..+.... .++.+++++++++..++.|.+||..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~----- 77 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE----- 77 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC-----
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc-----
Confidence 446778899988878777888999999 345555554443333 3455888888888899999999987653
Q ss_pred ccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecC----CeEEEEeCCCceEeEeee---ccccEEEEe--ecCCEE
Q 009373 237 ISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWD----MTVRVWDRALLKCLKVLR---HSDWVYGLA--PHDTTV 305 (536)
Q Consensus 237 ~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~---~~~~v~~~~--~~~~~l 305 (536)
.......+...+.++++ +++.+++...+ +.|.+||..+++....+. ....+.++. ++++++
T Consensus 78 --------~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~ 149 (333)
T 2dg1_A 78 --------IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFY 149 (333)
T ss_dssp --------EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEE
T ss_pred --------EEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEE
Confidence 11112245678999999 45566665555 689999998876543332 334566665 788888
Q ss_pred EEecC-------CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEE-EEEcCCCcEEEEEcccC-cccccc--ceee
Q 009373 306 ASTSG-------SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFL-FTGGEDGAIHMYEIIND-CTEANV--LLVA 374 (536)
Q Consensus 306 ~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l-~tg~~dg~i~iwd~~~~-~~~~~~--~~~~ 374 (536)
++... +.|..+|..+++..... .....+..++|+|+++.| ++.+.++.|.+||+... ...... ....
T Consensus 150 v~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~ 227 (333)
T 2dg1_A 150 FTDFRGYSTNPLGGVYYVSPDFRTVTPII--QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPY 227 (333)
T ss_dssp EEECCCBTTBCCEEEEEECTTSCCEEEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEE
T ss_pred EEeccccccCCCceEEEEeCCCCEEEEee--cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEE
Confidence 87663 45777777665544332 234567899999999855 45566889999998642 111000 0111
Q ss_pred eccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECC
Q 009373 375 TWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVR 408 (536)
Q Consensus 375 ~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~ 408 (536)
.+.++ ..+..+++++ .++++...++.|.+||..
T Consensus 228 ~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 228 YFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp ECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred ecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 22223 4678899975 556666678899999974
No 185
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.47 E-value=8.3e-12 Score=131.04 Aligned_cols=244 Identities=10% Similarity=0.012 Sum_probs=157.9
Q ss_pred eeeeeCccccEE---------EEEEe--cCCCE-EEEEeC-CCcEEEEECC--C-CceeeeeCC-----CCceE--EEEe
Q 009373 151 IDVLYGHTEAVL---------TVFVL--ASAKL-LFTSGY-DSIVRMWHLE--D-GFSIASSKP-----LGCTI--RAVA 207 (536)
Q Consensus 151 ~~~l~~h~~~V~---------~v~~~--~~~~~-l~sgs~-dg~v~iwd~~--~-~~~~~~~~~-----~~~~v--~~~~ 207 (536)
.+.+.+|...|. ...|+ |||+. |+.++. +..|.++++. + + ....+.. +...+ .+++
T Consensus 60 ~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~-~~~~l~~~~~~~~~~~~~~~~~s 138 (662)
T 3azo_A 60 EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGA-VPRPLTPVSAVGGGLRWADPVLL 138 (662)
T ss_dssp EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCC-CCEECSCCCCSTTCEEEEEEEEE
T ss_pred cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCC-CCEeccCCccCCCCccccCcEEC
Confidence 556667766666 66666 99998 776554 5667777765 2 3 3444444 44444 4667
Q ss_pred cCCCEEEEEeCC----------CcEEEEEcccCccceecccCcccccceEEee-CCccCEEEEEE--eCCEEEEEecCC-
Q 009373 208 ADKKLLVAGGTD----------GFIHCWRAVEVLPHLFDISGSEKQNTQFRLW-EHEGPITSLAL--DLTRIYSGSWDM- 273 (536)
Q Consensus 208 ~~~~~l~sg~~d----------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~--~~~~l~s~s~dg- 273 (536)
|||+.|++++.+ ..|++||+.++.. ........+. .+...+..++| |+++|+.++.++
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~ 210 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA--------ADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHP 210 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT--------TCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTT
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc--------ccCCceeEEEecCCCcccCceECCCCCEEEEEECCCC
Confidence 999999998877 5899999876100 0000222344 45566777788 788898887653
Q ss_pred -------eEEEEeCC-Cc---eEeEeee-ccccEEEEe--ecCCEEEEec-CC--cEEEEeCCCCcEEEEEccccccc--
Q 009373 274 -------TVRVWDRA-LL---KCLKVLR-HSDWVYGLA--PHDTTVASTS-GS--DVYIWDTNSGCLLTVVNGAHVGN-- 334 (536)
Q Consensus 274 -------~i~iwd~~-~~---~~~~~~~-~~~~v~~~~--~~~~~l~~~~-d~--~i~i~d~~~~~~~~~~~~~~~~~-- 334 (536)
.|.+||+. ++ +...... +...+..+. |+|++++++. ++ .|.+||+.+++..... ..+...
T Consensus 211 ~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~-~~~~~~~~ 289 (662)
T 3azo_A 211 RMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLC-RREEEFAG 289 (662)
T ss_dssp CCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESS-CCSSBSSC
T ss_pred CCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecc-cccccccC
Confidence 79999998 56 4433333 356677665 8899777776 56 6777887777654433 222222
Q ss_pred ------eEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEE-EEcCCe--EEEEeCCC--cEE
Q 009373 335 ------TKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSL-AFEFPW--LVSAAGDG--KLS 403 (536)
Q Consensus 335 ------i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l-~~~~~~--l~s~s~dg--~i~ 403 (536)
+..++|+|++.++++++. +.++||.+.... ..+..+..|...+..+ +++++. +++++.+. .|.
T Consensus 290 p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~-----~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 290 PLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPES-----GELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp CCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTT-----TEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred ccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCC-----CcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEE
Confidence 567889999999999999 999999554321 1245667778888888 787753 33344454 455
Q ss_pred EEECCcc
Q 009373 404 LIDVRKL 410 (536)
Q Consensus 404 vwd~~~~ 410 (536)
+||+.++
T Consensus 364 ~~d~~~g 370 (662)
T 3azo_A 364 ELDTVTG 370 (662)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 5565553
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.46 E-value=4.1e-12 Score=124.20 Aligned_cols=280 Identities=9% Similarity=-0.012 Sum_probs=168.2
Q ss_pred EEEECCCCceeeeeCCCCce-------EEEEecCCCEEEEEeCC---CcEEEEEcccCccceecccCcccccceEEeeCC
Q 009373 183 RMWHLEDGFSIASSKPLGCT-------IRAVAADKKLLVAGGTD---GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEH 252 (536)
Q Consensus 183 ~iwd~~~~~~~~~~~~~~~~-------v~~~~~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h 252 (536)
...|..++..+..+..+... -.+++|+|+.|+..... ..|.+||+.++. ...+..+
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~--------------~~~l~~~ 78 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ--------------AVQLTEG 78 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE--------------EEECCCS
T ss_pred eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc--------------EEEeecC
Confidence 34577777777766554322 23567999988776543 468888886653 1122222
Q ss_pred ccC-EEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEE---------------------EeecCCEEEE
Q 009373 253 EGP-ITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYG---------------------LAPHDTTVAS 307 (536)
Q Consensus 253 ~~~-v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~---------------------~~~~~~~l~~ 307 (536)
... ...+.| +++.|+.++.++.|.+||+.+++...... +...... ++|+++.++.
T Consensus 79 ~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~ 158 (396)
T 3c5m_A 79 KGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKF 158 (396)
T ss_dssp SCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHH
T ss_pred CCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceee
Confidence 222 222455 78899999999999999999887665554 2222111 1244444433
Q ss_pred e------cCCcEEEEeCCCCcEEEEEccccccceEEEEEeC-CCCEEEEEcCC------CcEEEEEcccCccccccceee
Q 009373 308 T------SGSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSH-TGDFLFTGGED------GAIHMYEIINDCTEANVLLVA 374 (536)
Q Consensus 308 ~------~d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~l~tg~~d------g~i~iwd~~~~~~~~~~~~~~ 374 (536)
. .+..|.+||+.+++..... .+...+..+.|+| ++..|+..+.+ ..|.+||+.... ..
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g~~~~~~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-------~~ 229 (396)
T 3c5m_A 159 AEFYHTNPTCRLIKVDIETGELEVIH--QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN-------VR 229 (396)
T ss_dssp HHHHHTCCCEEEEEEETTTCCEEEEE--EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC-------CE
T ss_pred eeeccCCCcceEEEEECCCCcEEeec--cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc-------ee
Confidence 2 2467999999998766554 3667789999999 78877766543 358888876542 12
Q ss_pred eccCC--CCCeEEEEEcC--CeEEEEeCC-----CcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEE
Q 009373 375 TWIPH--TGPVNSLAFEF--PWLVSAAGD-----GKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSV 445 (536)
Q Consensus 375 ~~~~h--~~~v~~l~~~~--~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 445 (536)
.+..+ ...+..++|+| ++|+.++.+ +.|++||+.++... .+.. ..++. ..+
T Consensus 230 ~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~----------~l~~-------~~~~~---~~~ 289 (396)
T 3c5m_A 230 KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE----------EVMV-------MPPCS---HLM 289 (396)
T ss_dssp ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE----------EEEE-------CCSEE---EEE
T ss_pred EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeE----------Eeee-------CCCCC---CCc
Confidence 22222 23578889986 566666543 44999998764211 0000 11111 456
Q ss_pred Ee-cCCEEEEec----------------CCCeEEEEeCCchhhHHHHHHhhhcccch-----hHHHhhhhccccccCCCC
Q 009373 446 DI-GADRIVCGG----------------EEGIVRIWNFSQAFEIERRARALRGIRLE-----NRMRRRKLQTEMSSKGGR 503 (536)
Q Consensus 446 ~~-~~~~l~sg~----------------~Dg~i~vW~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~ 503 (536)
++ +++++++++ .++.|++||+.++... . +...... ...........|+|+|+.
T Consensus 290 s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~----l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 364 (396)
T 3c5m_A 290 SNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-K----LCKHSTSWDVLDGDRQITHPHPSFTPNDDG 364 (396)
T ss_dssp ECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-E----EEECCCCCCCBTTBSSTTCCCCEECTTSSE
T ss_pred cCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-E----ccCCCCccccccccccCCCCCceEccCCCe
Confidence 66 777777654 3578999999876531 1 1110000 000011345789999999
Q ss_pred cceeEee
Q 009373 504 TDQCSVA 510 (536)
Q Consensus 504 ~~~~~~~ 510 (536)
++.++..
T Consensus 365 l~~~s~~ 371 (396)
T 3c5m_A 365 VLFTSDF 371 (396)
T ss_dssp EEEEECT
T ss_pred EEEEecC
Confidence 9877653
No 187
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.46 E-value=6.1e-12 Score=133.59 Aligned_cols=244 Identities=9% Similarity=-0.010 Sum_probs=146.9
Q ss_pred ccccCCccceeeeeCcccc-----EEEEEEecCCCEEEEEeCC---------CcEEEEECCCCceeeeeCCCCc--eEEE
Q 009373 142 SKTFLGRYSIDVLYGHTEA-----VLTVFVLASAKLLFTSGYD---------SIVRMWHLEDGFSIASSKPLGC--TIRA 205 (536)
Q Consensus 142 ~~~~~~~~~~~~l~~h~~~-----V~~v~~~~~~~~l~sgs~d---------g~v~iwd~~~~~~~~~~~~~~~--~v~~ 205 (536)
.+...+......+.+|... ...++|||||++|+.++.+ +.+.+||+.+++... +..+.. ...+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~~~~~~~~~~ 118 (740)
T 4a5s_A 40 VFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EERIPNNTQWVT 118 (740)
T ss_dssp EEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSCCCTTEEEEE
T ss_pred EEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-cccCCCcceeeE
Confidence 3333344445667777643 2347889999999998876 566799999987553 444444 3456
Q ss_pred EecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCcc---------CEEEEEE--eCCEEEEEecCC-
Q 009373 206 VAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEG---------PITSLAL--DLTRIYSGSWDM- 273 (536)
Q Consensus 206 ~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~l~~--~~~~l~s~s~dg- 273 (536)
++|||+.|+.+ .++.|++|++.++........+. ....+.++.+ ....+.| ||+.|+.++.|.
T Consensus 119 ~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~----~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~ 193 (740)
T 4a5s_A 119 WSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGK----EDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDT 193 (740)
T ss_dssp ECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCB----TTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECT
T ss_pred ECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCC----ccceecCcccccccchhcCCCcceEECCCCCEEEEEEEccc
Confidence 77999999888 46899999998765322111111 0011222221 1223666 777777765322
Q ss_pred -----------------------------------eEEEEeCCC---c---eEeEeee------ccccEEEEe--ecCCE
Q 009373 274 -----------------------------------TVRVWDRAL---L---KCLKVLR------HSDWVYGLA--PHDTT 304 (536)
Q Consensus 274 -----------------------------------~i~iwd~~~---~---~~~~~~~------~~~~v~~~~--~~~~~ 304 (536)
+|++||+.+ + +...... +...+..++ |+++.
T Consensus 194 ~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~ 273 (740)
T 4a5s_A 194 EVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERI 273 (740)
T ss_dssp TCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEE
T ss_pred CCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeE
Confidence 588899988 7 3332221 445566655 89986
Q ss_pred EEEec--C---CcEEEEeCCCCc----E---EEEEccccccceE-----EEEEeCCCCEEE-EEc-CCC--cEEEEEccc
Q 009373 305 VASTS--G---SDVYIWDTNSGC----L---LTVVNGAHVGNTK-----SLARSHTGDFLF-TGG-EDG--AIHMYEIIN 363 (536)
Q Consensus 305 l~~~~--d---~~i~i~d~~~~~----~---~~~~~~~~~~~i~-----~l~~~~~~~~l~-tg~-~dg--~i~iwd~~~ 363 (536)
++... + ..|.+||+.+++ + ...+..+|...+. ...|+|||+.|+ ..+ .+| .|++||+.+
T Consensus 274 ~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~ 353 (740)
T 4a5s_A 274 SLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDK 353 (740)
T ss_dssp EEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTC
T ss_pred EEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCC
Confidence 66543 1 369999999887 1 1111123554443 788999999776 554 444 477778766
Q ss_pred CccccccceeeeccCCCCCeEEEE-EcCCeEEEEeC
Q 009373 364 DCTEANVLLVATWIPHTGPVNSLA-FEFPWLVSAAG 398 (536)
Q Consensus 364 ~~~~~~~~~~~~~~~h~~~v~~l~-~~~~~l~s~s~ 398 (536)
+ .. ..+......|..+. ++++.|+..+.
T Consensus 354 ~------~~-~~lT~g~~~v~~~~~~d~~~i~f~~~ 382 (740)
T 4a5s_A 354 K------DC-TFITKGTWEVIGIEALTSDYLYYISN 382 (740)
T ss_dssp S------SC-EESCCSSSCEEEEEEECSSEEEEEES
T ss_pred C------ce-EecccCCEEEEEEEEEeCCEEEEEEe
Confidence 5 22 23333444555543 66665554444
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.44 E-value=2.9e-11 Score=111.52 Aligned_cols=176 Identities=13% Similarity=0.028 Sum_probs=134.7
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeeeeCCCC---ceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccc
Q 009373 169 SAKLLFTSGYDSIVRMWHLEDGFSIASSKPLG---CTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNT 245 (536)
Q Consensus 169 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~---~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 245 (536)
.+++|++++.|+.|.+||.++|+.+.++..+. ..-..+.|+|++++ +.++.|..||. +++ .
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~-------------~ 67 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR-------------E 67 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC-------------E
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC-------------E
Confidence 36889999999999999999999999987654 34456679999888 45778999997 543 3
Q ss_pred eEEeeCC-ccCEEEEEE--eCCEEEEEec-CCeEEEEeCCCceEeEeeecc-------ccE--EEEeecCCEEEEec-CC
Q 009373 246 QFRLWEH-EGPITSLAL--DLTRIYSGSW-DMTVRVWDRALLKCLKVLRHS-------DWV--YGLAPHDTTVASTS-GS 311 (536)
Q Consensus 246 ~~~~~~h-~~~v~~l~~--~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~-------~~v--~~~~~~~~~l~~~~-d~ 311 (536)
+..+..+ ...+.++.+ +++.+++.+. ++.|..+|. +++.+..+... ... .++.++++++++.. ++
T Consensus 68 ~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~ 146 (276)
T 3no2_A 68 LWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATS 146 (276)
T ss_dssp EEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTT
T ss_pred EEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCC
Confidence 3334333 245667777 8888888887 788888886 67777666511 112 23458899999888 79
Q ss_pred cEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccC
Q 009373 312 DVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIIND 364 (536)
Q Consensus 312 ~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~ 364 (536)
.|..||.. |+.+..+.. ...+.++...++|+++++++.++.|..+|..++
T Consensus 147 ~v~~~d~~-G~~~w~~~~--~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG 196 (276)
T 3no2_A 147 EVREIAPN-GQLLNSVKL--SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESN 196 (276)
T ss_dssp EEEEECTT-SCEEEEEEC--SSCCCEEEECTTSCEEEECBTTSEEEEECTTTC
T ss_pred EEEEECCC-CCEEEEEEC--CCCccceeEcCCCCEEEEeCCCCeEEEEeCcCC
Confidence 99999998 999988853 345667888999999999988889999999877
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.44 E-value=4.9e-11 Score=109.89 Aligned_cols=229 Identities=10% Similarity=-0.062 Sum_probs=152.0
Q ss_pred cEEEEEEecCCCEEE-EEeCCCcEEEEECCCCceeeeeCCC--CceEEEEecCCCEEEEEeCCCcEEEEEcccCccceec
Q 009373 160 AVLTVFVLASAKLLF-TSGYDSIVRMWHLEDGFSIASSKPL--GCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFD 236 (536)
Q Consensus 160 ~V~~v~~~~~~~~l~-sgs~dg~v~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 236 (536)
...++++++++++++ +.+.++.|.+|+..++......... ...-.++.++++++++.. ++.|.+||..+...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~---- 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ---- 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC----
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE----
Confidence 678999999999777 5477899999998665433221222 223355667888666555 88999999765421
Q ss_pred ccCcccccceEEee-CCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecCCEEEEec-
Q 009373 237 ISGSEKQNTQFRLW-EHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHDTTVASTS- 309 (536)
Q Consensus 237 ~~~~~~~~~~~~~~-~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~~~l~~~~- 309 (536)
..+. .....+..+++ ++..+++...++.|.+|+..+........ ....+.++. ++++++++..
T Consensus 100 ----------~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 169 (270)
T 1rwi_B 100 ----------TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTD 169 (270)
T ss_dssp ----------EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGG
T ss_pred ----------eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECC
Confidence 1111 22356788888 45666666678899999876554332221 222344444 7788777766
Q ss_pred CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEc
Q 009373 310 GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFE 389 (536)
Q Consensus 310 d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 389 (536)
++.|.+||........... .+...+.+++++++|.++++...++.|.+||..... .......+...+.+++++
T Consensus 170 ~~~i~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~------~~~~~~~~~~~p~~i~~~ 242 (270)
T 1rwi_B 170 NNRVVKLEAESNNQVVLPF-TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT------STVLPFTGLNTPLAVAVD 242 (270)
T ss_dssp GTEEEEECTTTCCEEECCC-SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC------CEECCCCSCSCEEEEEEC
T ss_pred CCEEEEEecCCCceEeecc-cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc------ceeeccCCCCCceeEEEC
Confidence 6899999998776544322 233678999999999888888788999999986652 122222334678999997
Q ss_pred C--CeEEEEeCCCcEEEEECCcc
Q 009373 390 F--PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 390 ~--~~l~s~s~dg~i~vwd~~~~ 410 (536)
+ ..+++...++.|+++++...
T Consensus 243 ~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 243 SDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp TTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCCCEEEEECCCCEEEEEcCCCc
Confidence 5 56777778999999998764
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.43 E-value=4.5e-10 Score=113.95 Aligned_cols=316 Identities=12% Similarity=0.044 Sum_probs=189.1
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCceeeeeCCC-CceEEEEecCCCEEEEEeCCCcEEEEEcc--cCccceecccCcccc
Q 009373 167 LASAKLLFTSGYDSIVRMWHLEDGFSIASSKPL-GCTIRAVAADKKLLVAGGTDGFIHCWRAV--EVLPHLFDISGSEKQ 243 (536)
Q Consensus 167 ~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~l~sg~~dg~i~vwd~~--~~~~~~~~~~~~~~~ 243 (536)
+|.+.++++...+++|.++|..+++.+.++... ......++|+++++++++.|+.|.+||+. +..
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~------------ 231 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT------------ 231 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC------------
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCc------------
Confidence 345567778888999999999999998887543 33456788999999999999999999985 331
Q ss_pred cceEEeeCCccCEEEEEEe------CCEEEEEe-cCCeEEEEeCCCceEeEeeecc------------ccEEEEe--ecC
Q 009373 244 NTQFRLWEHEGPITSLALD------LTRIYSGS-WDMTVRVWDRALLKCLKVLRHS------------DWVYGLA--PHD 302 (536)
Q Consensus 244 ~~~~~~~~h~~~v~~l~~~------~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~------------~~v~~~~--~~~ 302 (536)
....+.... ....++++ +++++++. .+++|.++|..+.+.+..+... ..+..+. +++
T Consensus 232 -~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~ 309 (567)
T 1qks_A 232 -TVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR 309 (567)
T ss_dssp -EEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS
T ss_pred -EeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCC
Confidence 233333322 34566664 56666554 5699999999999988876521 1344554 443
Q ss_pred C-EEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEc-CCCcEEEEEcccCccccccceeeeccCC
Q 009373 303 T-TVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGG-EDGAIHMYEIINDCTEANVLLVATWIPH 379 (536)
Q Consensus 303 ~-~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~h 379 (536)
. +++... +|.|.++|..+.+.+.............+.|+|+|++++++. .++.|.++|+.+++..... .+.....|
T Consensus 310 ~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i-~vgg~~Ph 388 (567)
T 1qks_A 310 PEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIE-DTGGQTPH 388 (567)
T ss_dssp SEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE-ECSSSSBC
T ss_pred CEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEE-eccCcCCC
Confidence 4 444444 689999999876543332222444567889999999876654 5788999999988422111 11011234
Q ss_pred CCCeEEEEEcC--C-eEEEEe-CCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEe
Q 009373 380 TGPVNSLAFEF--P-WLVSAA-GDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCG 455 (536)
Q Consensus 380 ~~~v~~l~~~~--~-~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg 455 (536)
.+.-..+ ++| . ..+++. .++.|.++|..+..... ..-+.+..+.. .+....-...++++.++...
T Consensus 389 pg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~--~~~kvv~~i~~--------~g~g~~~i~~~p~~~~l~v~ 457 (567)
T 1qks_A 389 PGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPD--NAWKILDSFPA--------LGGGSLFIKTHPNSQYLYVD 457 (567)
T ss_dssp CTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTT--TBTSEEEEEEC--------SCSCCCCEECCTTCSEEEEE
T ss_pred Cccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCcc--ccCEEEEEEec--------CCCCCEEEEeCCCCCeEEEe
Confidence 4322222 454 3 334443 46899999987632110 00011111110 11111112345666655554
Q ss_pred cC-------CCeEEEEeCCch-----hhH-HHHHHh-hhcccchhHHHhhhhccccccCCCCcceeEeec
Q 009373 456 GE-------EGIVRIWNFSQA-----FEI-ERRARA-LRGIRLENRMRRRKLQTEMSSKGGRTDQCSVAA 511 (536)
Q Consensus 456 ~~-------Dg~i~vW~~~~~-----~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 511 (536)
.. .+.|.++|+.+. ... +..... ..++. ..-++..+++++|+|..+....+..
T Consensus 458 ~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~G~~~~~s~~~~ 524 (567)
T 1qks_A 458 ATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGIT---EGQPRVVQGEFNKDGTEVWFSVWNG 524 (567)
T ss_dssp CTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCC---SSCCEEEEEEECTTSSEEEEEEECC
T ss_pred cCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccC---CCCcceEeeeECCCCCEEEEEeecC
Confidence 42 458999999876 110 000000 00000 0124567899999999988776643
No 191
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.42 E-value=1.9e-10 Score=111.70 Aligned_cols=260 Identities=12% Similarity=0.051 Sum_probs=164.1
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEE
Q 009373 169 SAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFR 248 (536)
Q Consensus 169 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 248 (536)
++..++.++.++.|..+|..+|+.+................+..+++++.++.|..+|..+++..-. .... .....
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~-~~~~---~~~~~ 177 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWT-VNLD---MPSLS 177 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEE-EECC---C----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEE-EeCC---CCcee
Confidence 4667888899999999999999988766443221111112356888899999999999988752111 0000 00000
Q ss_pred eeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEeeecccc-----------E-EEEeecCCEEEEec-CCcEEE
Q 009373 249 LWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVLRHSDW-----------V-YGLAPHDTTVASTS-GSDVYI 315 (536)
Q Consensus 249 ~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-----------v-~~~~~~~~~l~~~~-d~~i~i 315 (536)
.... ......++.++.++.++.+..+|..+++.+........ + ......+..++.++ ++.+..
T Consensus 178 ~~~~----~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~ 253 (376)
T 3q7m_A 178 LRGE----SAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTA 253 (376)
T ss_dssp -CCC----CCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEE
T ss_pred ecCC----CCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEE
Confidence 0011 12233567888899999999999999998877662211 1 01112344455555 899999
Q ss_pred EeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeecc-CCCCCeEEEEEcCCeEE
Q 009373 316 WDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWI-PHTGPVNSLAFEFPWLV 394 (536)
Q Consensus 316 ~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~l~ 394 (536)
+|..+++.+..... .....+.. ++..+++++.+|.+..+|..++. .+.... .....+.........|+
T Consensus 254 ~d~~tG~~~w~~~~---~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~------~~w~~~~~~~~~~~~~~~~~~~l~ 322 (376)
T 3q7m_A 254 LDLRSGQIMWKREL---GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGV------TLWTQSDLLHRLLTSPVLYNGNLV 322 (376)
T ss_dssp EETTTCCEEEEECC---CCEEEEEE--ETTEEEEEETTCCEEEEETTTCC------EEEEECTTTTSCCCCCEEETTEEE
T ss_pred EECCCCcEEeeccC---CCCCCceE--ECCEEEEEcCCCeEEEEECCCCc------EEEeecccCCCcccCCEEECCEEE
Confidence 99999998876642 22334443 36678888899999999998883 333222 12223344445678999
Q ss_pred EEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEEEe
Q 009373 395 SAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIWN 465 (536)
Q Consensus 395 s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~ 465 (536)
.++.+|.|.++|..+++..+.... .+ ..........+..|+.++.||.|+.|+
T Consensus 323 v~~~~g~l~~~d~~tG~~~~~~~~-----------------~~-~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 323 VGDSEGYLHWINVEDGRFVAQQKV-----------------DS-SGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EECTTSEEEEEETTTCCEEEEEEC-----------------CT-TCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEec-----------------CC-CcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 999999999999988643322111 00 000111122366888899999999987
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.41 E-value=7.6e-10 Score=112.24 Aligned_cols=305 Identities=14% Similarity=0.095 Sum_probs=179.9
Q ss_pred cEEEEEEecCCCEEEEEeCCCcEEEEECC--CCceeeeeCCCCc-eEEEEe----cCCCEEEEEeC-CCcEEEEEcccCc
Q 009373 160 AVLTVFVLASAKLLFTSGYDSIVRMWHLE--DGFSIASSKPLGC-TIRAVA----ADKKLLVAGGT-DGFIHCWRAVEVL 231 (536)
Q Consensus 160 ~V~~v~~~~~~~~l~sgs~dg~v~iwd~~--~~~~~~~~~~~~~-~v~~~~----~~~~~l~sg~~-dg~i~vwd~~~~~ 231 (536)
.+..+.|+|||+++++++.|+.|.+||+. +++.+..+..... .-.+++ |+|++++++.. +++|.++|..+.+
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 46689999999999999999999999995 7888777755443 345777 69988877665 5999999987654
Q ss_pred cceecccCcccccceEEeeCCc-cCEEEEEE---eCCEEEEEecCCeEEEEeCCCceEeE--eeeccccEE--EEeecCC
Q 009373 232 PHLFDISGSEKQNTQFRLWEHE-GPITSLAL---DLTRIYSGSWDMTVRVWDRALLKCLK--VLRHSDWVY--GLAPHDT 303 (536)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~---~~~~l~s~s~dg~i~iwd~~~~~~~~--~~~~~~~v~--~~~~~~~ 303 (536)
... .+........ ....|. ..+..+.. .+..+++...+|.|.++|..+.+... .+....... .++++++
T Consensus 278 ~~~-~i~~~~~~~~--~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr 354 (567)
T 1qks_A 278 PKK-IQSTRGMTYD--EQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHR 354 (567)
T ss_dssp EEE-EEECCEECTT--TCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSC
T ss_pred EEE-EEeccccccc--cccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCC
Confidence 211 0000000000 000011 24566665 23456666778999999987654332 222333333 3558899
Q ss_pred EEEEec--CCcEEEEeCCCCcEEEEEcc----ccccceEEEEEeCCCCEE-EEEc-CCCcEEEEEcccCcc-ccccceee
Q 009373 304 TVASTS--GSDVYIWDTNSGCLLTVVNG----AHVGNTKSLARSHTGDFL-FTGG-EDGAIHMYEIINDCT-EANVLLVA 374 (536)
Q Consensus 304 ~l~~~~--d~~i~i~d~~~~~~~~~~~~----~~~~~i~~l~~~~~~~~l-~tg~-~dg~i~iwd~~~~~~-~~~~~~~~ 374 (536)
+++++. ++.|.++|+.+++.+..+.. .|.+.-..+ ++|++..+ +++. .++.|.++|..+... ....+.+.
T Consensus 355 ~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~ 433 (567)
T 1qks_A 355 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILD 433 (567)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEE
Confidence 887665 68999999999998777653 243322222 68875544 4553 468999999887321 11234556
Q ss_pred eccCCCCCeEEEEEcC--CeEEEEeC-------CCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEE
Q 009373 375 TWIPHTGPVNSLAFEF--PWLVSAAG-------DGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSV 445 (536)
Q Consensus 375 ~~~~h~~~v~~l~~~~--~~l~s~s~-------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 445 (536)
++......-..+..+| .+|++... .++|.|+|+.+....... .....+ ...+. ..+......+..+
T Consensus 434 ~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~---~~~~~~-~~~~~-~~~~~~~~~~~~~ 508 (567)
T 1qks_A 434 SFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSD---PEFKTL-PIAEW-AGITEGQPRVVQG 508 (567)
T ss_dssp EEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSC---CCEEEE-CHHHH-HTCCSSCCEEEEE
T ss_pred EEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccC---CCcEEe-ccccc-cccCCCCcceEee
Confidence 6554433334456666 57777653 359999999875110000 000000 00000 0000112344555
Q ss_pred Eec--CCEE-EEe-c---CCCeEEEEeCCchhhHH
Q 009373 446 DIG--ADRI-VCG-G---EEGIVRIWNFSQAFEIE 473 (536)
Q Consensus 446 ~~~--~~~l-~sg-~---~Dg~i~vW~~~~~~~~~ 473 (536)
.++ |+++ +|. + .++.|.|+|..+.+...
T Consensus 509 ~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~ 543 (567)
T 1qks_A 509 EFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKH 543 (567)
T ss_dssp EECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred eECCCCCEEEEEeecCCCCCCcEEEEECCCceEEE
Confidence 554 5543 442 2 47999999999987654
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.40 E-value=2.8e-09 Score=99.53 Aligned_cols=233 Identities=7% Similarity=-0.036 Sum_probs=154.7
Q ss_pred eeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeee-eCCCCceEEEE--ecCCCEEEEEeCCCcEEEEEcccC
Q 009373 154 LYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIAS-SKPLGCTIRAV--AADKKLLVAGGTDGFIHCWRAVEV 230 (536)
Q Consensus 154 l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~-~~~~~~~v~~~--~~~~~~l~sg~~dg~i~vwd~~~~ 230 (536)
+......+.++++.++|++.++...++.|.+||.. ++.... +......+..+ .+++.++++...++.|..+|.. +
T Consensus 15 ~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 15 LSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 34456788999999999988887788999999988 554432 22222344444 4677777776668889999876 3
Q ss_pred ccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEe-ee-ccccEEEEe--ecCCE
Q 009373 231 LPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKV-LR-HSDWVYGLA--PHDTT 304 (536)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~-~~-~~~~v~~~~--~~~~~ 304 (536)
.. ...........+.++++ ++..+++...++.|..+|.. ++.... +. ....+.++. +++++
T Consensus 93 ~~------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l 159 (300)
T 2qc5_A 93 GF------------TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNAL 159 (300)
T ss_dssp CE------------EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSE
T ss_pred Ce------------EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCE
Confidence 21 11122223456888888 45556665557899999987 554422 22 234566665 67887
Q ss_pred EEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCe
Q 009373 305 VASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPV 383 (536)
Q Consensus 305 l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v 383 (536)
+++.. ++.|..+|. +++........+...+..++++++|.+.++....+.|.+||. ++. ........+...+
T Consensus 160 ~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~-----~~~~~~~~~~~~~ 232 (300)
T 2qc5_A 160 WFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE-----ISEYDIPTPNARP 232 (300)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC-----EEEEECSSTTCCE
T ss_pred EEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc-----EEEEECCCCCCCc
Confidence 77766 688999998 565544322234457889999999987777777788999998 331 1112223455678
Q ss_pred EEEEEcC-CeEEEEe-CCCcEEEEECC
Q 009373 384 NSLAFEF-PWLVSAA-GDGKLSLIDVR 408 (536)
Q Consensus 384 ~~l~~~~-~~l~s~s-~dg~i~vwd~~ 408 (536)
.++++++ ..|..+. .++.|..||..
T Consensus 233 ~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 233 HAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred eEEEECCCCCEEEeccCCCeEEEECCC
Confidence 8999975 3444444 56899999873
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.40 E-value=1.5e-09 Score=101.41 Aligned_cols=233 Identities=10% Similarity=0.021 Sum_probs=154.1
Q ss_pred eCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCcee-eeeCCCCceEEE--EecCCCEEEEEeCCCcEEEEEcccCc
Q 009373 155 YGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSI-ASSKPLGCTIRA--VAADKKLLVAGGTDGFIHCWRAVEVL 231 (536)
Q Consensus 155 ~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~-~~~~~~~~~v~~--~~~~~~~l~sg~~dg~i~vwd~~~~~ 231 (536)
..+...+.++++++++.++++...++.|..|+.. ++.. .........+.. +.+++.++++...++.|.+||. ++.
T Consensus 53 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 53 PTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred CcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence 3456789999999999988887778999999986 4322 222222333444 4477877777777889999987 432
Q ss_pred cceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEe-ee-ccccEEEEe--ecCCEE
Q 009373 232 PHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKV-LR-HSDWVYGLA--PHDTTV 305 (536)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~-~~-~~~~v~~~~--~~~~~l 305 (536)
. .......+...+..+++ ++..+++...++.|..||. +++.... .. ....+.++. +++.++
T Consensus 131 ~------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 197 (299)
T 2z2n_A 131 I------------REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALW 197 (299)
T ss_dssp E------------EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEE
T ss_pred E------------EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEE
Confidence 1 11112234456888888 4455555556789999998 6655432 22 334456665 677877
Q ss_pred EEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeE
Q 009373 306 ASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVN 384 (536)
Q Consensus 306 ~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~ 384 (536)
++.. ++.|.+||. +++........+...+.+++++++|.+.++...++.|..||. ++. .....+..+...+.
T Consensus 198 v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-----~~~~~~~~~~~~~~ 270 (299)
T 2z2n_A 198 FVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI-----IEEYPIQIKSAEPH 270 (299)
T ss_dssp EEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTE-----EEEEECSSSSCCEE
T ss_pred EEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCc-----eEEEeCCCCCCccc
Confidence 7766 688999999 666443222234567899999999997777767889999998 331 11122334556788
Q ss_pred EEEEcCCeEEEEeCCCcEEEEECCc
Q 009373 385 SLAFEFPWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 385 ~l~~~~~~l~s~s~dg~i~vwd~~~ 409 (536)
++++....|..+...+.|..++.++
T Consensus 271 ~i~~~~g~l~v~~~~~~l~~~~~~~ 295 (299)
T 2z2n_A 271 GICFDGETIWFAMECDKIGKLTLIK 295 (299)
T ss_dssp EEEECSSCEEEEETTTEEEEEEEC-
T ss_pred eEEecCCCEEEEecCCcEEEEEcCc
Confidence 9988335666665567788888765
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.37 E-value=2.9e-09 Score=102.62 Aligned_cols=271 Identities=10% Similarity=-0.033 Sum_probs=169.1
Q ss_pred EecCCCEEEEEeC--CC---cEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEe----------CCCcEEEEEcccC
Q 009373 166 VLASAKLLFTSGY--DS---IVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGG----------TDGFIHCWRAVEV 230 (536)
Q Consensus 166 ~~~~~~~l~sgs~--dg---~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~----------~dg~i~vwd~~~~ 230 (536)
..|+++++++... .. +|.++|..+++.+..+.....+-..++||++.++++. .++.|.+||..+.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 3467777766653 22 8899999999998888765556778889999999886 3678999998765
Q ss_pred ccceecccCcccccceEEeeC-------CccCEEEEEE--eCCEEEEEec--CCeEEEEeCCCceEeEe-eeccccEEEE
Q 009373 231 LPHLFDISGSEKQNTQFRLWE-------HEGPITSLAL--DLTRIYSGSW--DMTVRVWDRALLKCLKV-LRHSDWVYGL 298 (536)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~-------h~~~v~~l~~--~~~~l~s~s~--dg~i~iwd~~~~~~~~~-~~~~~~v~~~ 298 (536)
+. ...+.- +...-..+.+ ++++|+.+.. ++.|.++| .+++.+.. +.....+ .+
T Consensus 108 ~~-------------~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~-~~ 172 (373)
T 2mad_H 108 LP-------------IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCY-HI 172 (373)
T ss_pred cE-------------EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceE-EE
Confidence 31 111110 0122335666 7888888774 57899999 99998888 6644433 23
Q ss_pred eecC-CEEEEec-CCcEEEEeCCCCcEEEEEcc----ccccc-eEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccc
Q 009373 299 APHD-TTVASTS-GSDVYIWDTNSGCLLTVVNG----AHVGN-TKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVL 371 (536)
Q Consensus 299 ~~~~-~~l~~~~-d~~i~i~d~~~~~~~~~~~~----~~~~~-i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~ 371 (536)
.+.+ +.+++.+ ||.+.++|. +++....... ....+ .....+.+++..++..+.++.+.+.|+..... .
T Consensus 173 ~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~----~ 247 (373)
T 2mad_H 173 HPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGA----T 247 (373)
T ss_pred EeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcc----e
Confidence 3443 3444444 899999999 8876643210 01111 12345666665555445788999999865421 1
Q ss_pred eeeeccC----------CCCCeEEEEEcC--CeEEEEeC----------CCcEEEEECCcccccCCCCCCCceeeEEeeC
Q 009373 372 LVATWIP----------HTGPVNSLAFEF--PWLVSAAG----------DGKLSLIDVRKLLRSGRPTSGKRVSRVIEVE 429 (536)
Q Consensus 372 ~~~~~~~----------h~~~v~~l~~~~--~~l~s~s~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 429 (536)
.+..+.- .......+++++ +.++++.. ++.|.++|..+.+....
T Consensus 248 v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~-------------- 313 (373)
T 2mad_H 248 NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQ-------------- 313 (373)
T ss_pred EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEE--------------
Confidence 1111110 112233466665 56665543 35799999987532211
Q ss_pred CCeeeeccccccEEEEEecCC-EEEEec-CCCeEEEEeCCchhhHHH
Q 009373 430 PPQRMLHGFECNLLSVDIGAD-RIVCGG-EEGIVRIWNFSQAFEIER 474 (536)
Q Consensus 430 ~~~~~~~~~~~~v~~~~~~~~-~l~sg~-~Dg~i~vW~~~~~~~~~~ 474 (536)
..-+....-..++++++ +++++. .++.|.++|..+++.+.+
T Consensus 314 ----i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 314 ----ISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred ----EECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 11122344456667777 677776 589999999999887755
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.35 E-value=1.1e-10 Score=123.83 Aligned_cols=239 Identities=13% Similarity=-0.048 Sum_probs=153.0
Q ss_pred CccccEEEEEEecCCCEEEEEeCC-----CcEEEEECCCCceeeeeCCCCc--eEEEEecCCCEEEEEeCCCc-------
Q 009373 156 GHTEAVLTVFVLASAKLLFTSGYD-----SIVRMWHLEDGFSIASSKPLGC--TIRAVAADKKLLVAGGTDGF------- 221 (536)
Q Consensus 156 ~h~~~V~~v~~~~~~~~l~sgs~d-----g~v~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~l~sg~~dg~------- 221 (536)
+|...+..++|+|||++|+.++.+ ..|++||+.+++.+.... +.. .-.+++|| +.|+.++.++.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 455578899999999999877654 469999999998765321 111 23467799 88888877654
Q ss_pred -------EEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCC-----eEEEEeCCCc--eE
Q 009373 222 -------IHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDM-----TVRVWDRALL--KC 285 (536)
Q Consensus 222 -------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg-----~i~iwd~~~~--~~ 285 (536)
|++|++.++.. ....+.....+...+..+.| ++++|+..+.++ .|.+||+.++ ++
T Consensus 238 ~~~~~~~v~~~~lgt~~~---------~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 308 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQS---------ADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGP 308 (741)
T ss_dssp -CCCCCEEEEEETTSCGG---------GCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECC
T ss_pred cCCCCCEEEEEECCCCch---------hCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcc
Confidence 88888866521 00112222233345788888 778888777554 8999999876 31
Q ss_pred eEeee-cc-ccEEEEeecCCEEEEec-C----CcEEEEeCCCC-cEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEE
Q 009373 286 LKVLR-HS-DWVYGLAPHDTTVASTS-G----SDVYIWDTNSG-CLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIH 357 (536)
Q Consensus 286 ~~~~~-~~-~~v~~~~~~~~~l~~~~-d----~~i~i~d~~~~-~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~ 357 (536)
...+. +. .....+.+++..|+..+ . +.|.+||+.++ .....+...+...+..+.++ ++.++++...|+..+
T Consensus 309 ~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~ 387 (741)
T 1yr2_A 309 VTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQ 387 (741)
T ss_dssp CEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEE
T ss_pred cEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEE
Confidence 33333 33 33334458888777665 2 35999999885 23334434455567778887 567788888899888
Q ss_pred EEEcccCccccccceeeeccC-CCCCeEEEEEcC--C-eEEEEeC---CCcEEEEECCccc
Q 009373 358 MYEIINDCTEANVLLVATWIP-HTGPVNSLAFEF--P-WLVSAAG---DGKLSLIDVRKLL 411 (536)
Q Consensus 358 iwd~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~--~-~l~s~s~---dg~i~vwd~~~~~ 411 (536)
||.+.... .....+.. +.+.|..+.+++ + ++++.+. .++|++||+.++.
T Consensus 388 l~~~~~~g-----~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 388 VLAFDLDG-----KPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEETTS-----CEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEeCCC-----CceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 88765221 22333433 366788888875 3 3333332 4789999987653
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.33 E-value=3.9e-11 Score=110.68 Aligned_cols=236 Identities=10% Similarity=-0.026 Sum_probs=153.7
Q ss_pred CCEEEEEecCCeEEEEeCCCceEeEeeecc--ccEEEEe--ecCCEEEEecCCcEEEEeCCCCcEEEEEccccccceEEE
Q 009373 263 LTRIYSGSWDMTVRVWDRALLKCLKVLRHS--DWVYGLA--PHDTTVASTSGSDVYIWDTNSGCLLTVVNGAHVGNTKSL 338 (536)
Q Consensus 263 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~--~~~~~l~~~~d~~i~i~d~~~~~~~~~~~~~~~~~i~~l 338 (536)
++.|++++.|+.|.+||.++++.+..+... ..+.++. |+|++++ +.++.|..||. +++.+..+..+....+.++
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~ 82 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQTA 82 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCcccccc
Confidence 467899999999999999999999998832 2455444 8999888 55788999999 8999998875434578899
Q ss_pred EEeCCCCEEEEEcC-CCcEEEEEcccCccccccceeeeccCCCCCeEEEEEc--CCeEEEEeCCCcEEEEECCcccccCC
Q 009373 339 ARSHTGDFLFTGGE-DGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFE--FPWLVSAAGDGKLSLIDVRKLLRSGR 415 (536)
Q Consensus 339 ~~~~~~~~l~tg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~ 415 (536)
.+.|+|+++++.+. ++.|..+|. +++.......-.....+......+++. ++++++...++.|..||.. ++..+.
T Consensus 83 ~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~ 160 (276)
T 3no2_A 83 RILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNS 160 (276)
T ss_dssp EECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred EECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEE
Confidence 99999999999887 777777775 342111111000111222234444554 5899999999999999987 544432
Q ss_pred CCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEEEeCCchhhHHHHHHhh-hcccchhHHHhhhhc
Q 009373 416 PTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFEIERRARAL-RGIRLENRMRRRKLQ 494 (536)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 494 (536)
.... +. .......++++.+++++.++.|..+|..+|+.+.+..... ++.+ -..+..
T Consensus 161 ~~~~-----------------~~-~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~-----l~~~~~ 217 (276)
T 3no2_A 161 VKLS-----------------GT-PFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQ-----LFFVAQ 217 (276)
T ss_dssp EECS-----------------SC-CCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCC-----CSEEEE
T ss_pred EECC-----------------CC-ccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCcc-----cccccc
Confidence 2111 00 1112334567788988888999999999898876654211 1111 122456
Q ss_pred cccccCCCCcceeEeec--------ccC--CcCCCcceeec
Q 009373 495 TEMSSKGGRTDQCSVAA--------KKN--PMNGNRRSVWH 525 (536)
Q Consensus 495 ~~~~~~g~~~~~~~~~~--------~~~--~~~~~~~~~~~ 525 (536)
+...++|..+++.+-.. ... .++.+.+.+|.
T Consensus 218 ~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~ 258 (276)
T 3no2_A 218 LFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQ 258 (276)
T ss_dssp EEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEE
T ss_pred ceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEE
Confidence 67778887666543111 112 22367778883
No 198
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.32 E-value=4.2e-10 Score=103.58 Aligned_cols=229 Identities=11% Similarity=0.014 Sum_probs=143.9
Q ss_pred EEEEecCCCEEE-EEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEe
Q 009373 203 IRAVAADKKLLV-AGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWD 279 (536)
Q Consensus 203 v~~~~~~~~~l~-sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd 279 (536)
-.++.+++++++ +.+.++.|.+|+..+.... .....+...+.++++ +++ ++.+..++.|.+||
T Consensus 28 ~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~-------------~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~i~~~d 93 (270)
T 1rwi_B 28 GVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT-------------VLPFNGLYQPQGLAVDGAGT-VYVTDFNNRVVTLA 93 (270)
T ss_dssp EEEECTTCCEEEEECSSSCEEEEECC-----E-------------ECCCCSCCSCCCEEECTTCC-EEEEETTTEEEEEC
T ss_pred ceEECCCCCEEEEccCCCCcEEEecCCCcccc-------------eEeeCCcCCcceeEECCCCC-EEEEcCCCEEEEEe
Confidence 345568888666 4477899999987543211 111123345677888 445 44444488999999
Q ss_pred CCCceEeEeee-ccccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCc
Q 009373 280 RALLKCLKVLR-HSDWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGA 355 (536)
Q Consensus 280 ~~~~~~~~~~~-~~~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~ 355 (536)
........... ....+.++. ++++++++.. ++.|.+|+..+....... ......+.+++++++|+++++...++.
T Consensus 94 ~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~ 172 (270)
T 1rwi_B 94 AGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP-FTGLNDPDGVAVDNSGNVYVTDTDNNR 172 (270)
T ss_dssp TTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC-CCSCCSCCCEEECTTCCEEEEEGGGTE
T ss_pred CCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec-cccCCCceeEEEeCCCCEEEEECCCCE
Confidence 87654432211 224566665 6788777766 688999987665443322 123346788999999998888777889
Q ss_pred EEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCee
Q 009373 356 IHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQR 433 (536)
Q Consensus 356 i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (536)
|.+||..... .......+...+.++++++ ..+++...++.|.+||........
T Consensus 173 i~~~~~~~~~------~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~------------------- 227 (270)
T 1rwi_B 173 VVKLEAESNN------QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV------------------- 227 (270)
T ss_dssp EEEECTTTCC------EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-------------------
T ss_pred EEEEecCCCc------eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-------------------
Confidence 9999987652 2222223346788999986 344444557899999986531110
Q ss_pred eeccccccEEEEE--ecCCEEEEecCCCeEEEEeCCchhh
Q 009373 434 MLHGFECNLLSVD--IGADRIVCGGEEGIVRIWNFSQAFE 471 (536)
Q Consensus 434 ~~~~~~~~v~~~~--~~~~~l~sg~~Dg~i~vW~~~~~~~ 471 (536)
....+.....++. ++++.+++...++.|+++++...+.
T Consensus 228 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 228 LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 0011112334444 4566888888999999999987653
No 199
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.31 E-value=1.8e-09 Score=100.89 Aligned_cols=184 Identities=13% Similarity=0.059 Sum_probs=124.4
Q ss_pred EEEEecCCC-EEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEe
Q 009373 203 IRAVAADKK-LLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWD 279 (536)
Q Consensus 203 v~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd 279 (536)
-.++.++++ +++++..++.|..|+..++ ...+..+...+.++++ ++..+++...++.|.+||
T Consensus 32 g~~~d~~g~~l~~~~~~~~~i~~~~~~~~---------------~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVRQNRTWAWSDDGQ---------------LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp EEEEEGGGTEEEEEEGGGTEEEEEETTSC---------------EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred CCeEeCCCCEEEEEeCCCCEEEEEECCCC---------------eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 356678888 7888889999999998653 2234456677899999 556666666678999999
Q ss_pred CCCceEeEeee-c----cccEEE--EeecCCEEEEe----c--------------CCcEEEEeCCCCcEEEEEccccccc
Q 009373 280 RALLKCLKVLR-H----SDWVYG--LAPHDTTVAST----S--------------GSDVYIWDTNSGCLLTVVNGAHVGN 334 (536)
Q Consensus 280 ~~~~~~~~~~~-~----~~~v~~--~~~~~~~l~~~----~--------------d~~i~i~d~~~~~~~~~~~~~~~~~ 334 (536)
..+++...... . ...+.. +.++|+++++. . .+.|..+|.. ++.. .+. .+...
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~-~~~~~ 173 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-API-RDRVK 173 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EEE-CCCSS
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-Eee-cCCCC
Confidence 98887654432 1 112333 44889888863 2 2456667665 4433 332 35667
Q ss_pred eEEEEEeCCCCEEEEEcCCCcEEEEEcc-cCccccccceeeeccCCCCCeEEEEEcC-CeEEEEeCCCcEEEEECC
Q 009373 335 TKSLARSHTGDFLFTGGEDGAIHMYEII-NDCTEANVLLVATWIPHTGPVNSLAFEF-PWLVSAAGDGKLSLIDVR 408 (536)
Q Consensus 335 i~~l~~~~~~~~l~tg~~dg~i~iwd~~-~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~ 408 (536)
...++|+|+++.+++.+.++.|.+|++. ++..... ...+..+...+.++++++ ..|.++. ++.|.+||..
T Consensus 174 ~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~---~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~ 245 (296)
T 3e5z_A 174 PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQ---GVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD 245 (296)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEE---EEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT
T ss_pred CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCC---CeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC
Confidence 8899999999988888888999999997 3311000 111233566678899976 3455555 8899999975
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.31 E-value=1.9e-09 Score=101.58 Aligned_cols=240 Identities=6% Similarity=-0.025 Sum_probs=148.7
Q ss_pred eeeCccccEEEEEEecCCCEEEE-------EeCCCcEEEEECCCCceeeeeC----CCCceEEEE--ecCCCEEEEEeCC
Q 009373 153 VLYGHTEAVLTVFVLASAKLLFT-------SGYDSIVRMWHLEDGFSIASSK----PLGCTIRAV--AADKKLLVAGGTD 219 (536)
Q Consensus 153 ~l~~h~~~V~~v~~~~~~~~l~s-------gs~dg~v~iwd~~~~~~~~~~~----~~~~~v~~~--~~~~~~l~sg~~d 219 (536)
.+.+.-....+++|++++.++++ +..++.|.+||..+++...... ++...+..+ .+++..++.++..
T Consensus 12 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~ 91 (314)
T 1pjx_A 12 KVTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR 91 (314)
T ss_dssp EEECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT
T ss_pred hhhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC
Confidence 34444556789999999988888 6778999999988887543222 122334444 4662344555545
Q ss_pred CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecC---------------CeEEEEeCCC
Q 009373 220 GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWD---------------MTVRVWDRAL 282 (536)
Q Consensus 220 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~d---------------g~i~iwd~~~ 282 (536)
+.|.+||.. +....+. .... .......+.++++ +++.+++...+ +.|..||..
T Consensus 92 ~~l~~~d~~-g~~~~~~-~~~~-------~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIA-KKDS-------EGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD- 161 (314)
T ss_dssp TEEEEEETT-SCEEECC-SBCT-------TSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-
T ss_pred CCEEEEeCC-CCEEEEE-eccC-------CCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-
Confidence 578899986 4311100 0000 0011245778888 45566655554 577778766
Q ss_pred ceEeEeeeccccEE--EEe----ecCCEEEEe-c-CCcEEEEeCC-CCcE-----EEEEccccc-cceEEEEEeCCCCEE
Q 009373 283 LKCLKVLRHSDWVY--GLA----PHDTTVAST-S-GSDVYIWDTN-SGCL-----LTVVNGAHV-GNTKSLARSHTGDFL 347 (536)
Q Consensus 283 ~~~~~~~~~~~~v~--~~~----~~~~~l~~~-~-d~~i~i~d~~-~~~~-----~~~~~~~~~-~~i~~l~~~~~~~~l 347 (536)
++............ .+. ++++.++.+ . ++.|.+||+. +++. ...+. ++. ..+..++++++|.++
T Consensus 162 g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~i~~d~~G~l~ 240 (314)
T 1pjx_A 162 GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP-GTHEGGADGMDFDEDNNLL 240 (314)
T ss_dssp SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC-CCSSCEEEEEEEBTTCCEE
T ss_pred CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC-CCCCCCCCceEECCCCCEE
Confidence 55444333222333 344 666555444 4 6889999986 4432 22221 233 567889999999988
Q ss_pred EEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEE-eCCCcEEEEECCc
Q 009373 348 FTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSA-AGDGKLSLIDVRK 409 (536)
Q Consensus 348 ~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~-s~dg~i~vwd~~~ 409 (536)
++...++.|.+||..++ ..+..+..+...+.+++|++ ..|+.+ ..++.|..|++..
T Consensus 241 v~~~~~~~i~~~d~~~g------~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 241 VANWGSSHIEVFGPDGG------QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEETTTEEEEECTTCB------SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEcCCCEEEEEcCCCC------cEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 88878889999998755 23334445667899999975 445544 4568899999875
No 201
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.30 E-value=8.5e-10 Score=116.54 Aligned_cols=228 Identities=10% Similarity=0.023 Sum_probs=141.5
Q ss_pred EEEecCCCEEEEEeCCC-----cEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCe--
Q 009373 204 RAVAADKKLLVAGGTDG-----FIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMT-- 274 (536)
Q Consensus 204 ~~~~~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~-- 274 (536)
.+++|||++|+.++.++ .|++||+.++... ...+ ....+.+++| |++.|+.++.++.
T Consensus 130 ~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~------------~~~~--~~~~~~~~~wspDg~~l~~~~~~~~~~ 195 (710)
T 2xdw_A 130 YAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL------------PDVL--ERVKFSCMAWTHDGKGMFYNAYPQQDG 195 (710)
T ss_dssp EEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE------------EEEE--EEECSCCEEECTTSSEEEEEECCCCSS
T ss_pred EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC------------cccc--cCcccceEEEEeCCCEEEEEEECCccc
Confidence 46679999998776543 8999999886411 1111 1122566888 7788998888776
Q ss_pred --------------EEEEeCCCceEe--Eeee---ccccEEEE--eecCCEEEEec------CCcEEEEeCCC------C
Q 009373 275 --------------VRVWDRALLKCL--KVLR---HSDWVYGL--APHDTTVASTS------GSDVYIWDTNS------G 321 (536)
Q Consensus 275 --------------i~iwd~~~~~~~--~~~~---~~~~v~~~--~~~~~~l~~~~------d~~i~i~d~~~------~ 321 (536)
|++|++.+++.. ..+. +...+..+ ++++++|+.++ +..|.+||+.+ +
T Consensus 196 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 275 (710)
T 2xdw_A 196 KSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITG 275 (710)
T ss_dssp CCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCS
T ss_pred cccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCC
Confidence 999999887632 2222 33444444 49999887654 35799999986 4
Q ss_pred c-EEEEEccccccceEEEEEeCCCCEEEEEcCC----CcEEEEEcccCccccccceeeeccCCCC--CeEEEEEc-C-Ce
Q 009373 322 C-LLTVVNGAHVGNTKSLARSHTGDFLFTGGED----GAIHMYEIINDCTEANVLLVATWIPHTG--PVNSLAFE-F-PW 392 (536)
Q Consensus 322 ~-~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~d----g~i~iwd~~~~~~~~~~~~~~~~~~h~~--~v~~l~~~-~-~~ 392 (536)
. ....+. .+...+.. .|+|+|+.|+..+.+ +.|.+||+.++.. .....+..|.. .+..++|+ . .+
T Consensus 276 ~~~~~~l~-~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~l 349 (710)
T 2xdw_A 276 ILKWVKLI-DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE----SKWKVLVPEHEKDVLEWVACVRSNFL 349 (710)
T ss_dssp SCCCEEEE-CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCG----GGCEEEECCCSSCEEEEEEEETTTEE
T ss_pred ccceEEee-CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCc----ccceeccCCCCCCeEEEEEEEcCCEE
Confidence 3 344443 34444544 488899877766553 3599999877621 12233444544 67888887 4 46
Q ss_pred EEEEeCCCc--EEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEec--CCEEE-E---ecCCCeEEEE
Q 009373 393 LVSAAGDGK--LSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIG--ADRIV-C---GGEEGIVRIW 464 (536)
Q Consensus 393 l~s~s~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~-s---g~~Dg~i~vW 464 (536)
+++...|+. |.+||+.++.. ...+..+...+..++++ ++.++ + ....++|++|
T Consensus 350 v~~~~~~g~~~l~~~~~~~g~~-------------------~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~ 410 (710)
T 2xdw_A 350 VLCYLHDVKNTLQLHDLATGAL-------------------LKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHC 410 (710)
T ss_dssp EEEEEETTEEEEEEEETTTCCE-------------------EEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEE
T ss_pred EEEEEECCEEEEEEEECCCCCE-------------------EEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEE
Confidence 667777875 55666644311 11122234455566554 44333 2 2346889999
Q ss_pred eCCchh
Q 009373 465 NFSQAF 470 (536)
Q Consensus 465 ~~~~~~ 470 (536)
|+.+++
T Consensus 411 d~~tg~ 416 (710)
T 2xdw_A 411 DLTKEE 416 (710)
T ss_dssp ETTSSS
T ss_pred ECCCCc
Confidence 998876
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.29 E-value=5e-10 Score=106.56 Aligned_cols=274 Identities=13% Similarity=0.061 Sum_probs=171.2
Q ss_pred EEEecCCCEEEEEeC-----CCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEe----------CCCcEEEEEcc
Q 009373 164 VFVLASAKLLFTSGY-----DSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGG----------TDGFIHCWRAV 228 (536)
Q Consensus 164 v~~~~~~~~l~sgs~-----dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~----------~dg~i~vwd~~ 228 (536)
....|+++.++.... ++.|.+.|..+++.+.++.....+-..++|+++.++++. .++.|.+||..
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 345788888887765 689999999999998888654444488899999888776 36789999998
Q ss_pred cCccceecccCcccccceEEeeCC-------ccCEEEEEE--eCCEEEEEec--CCeEEEEeCCCceEeEeeeccccEEE
Q 009373 229 EVLPHLFDISGSEKQNTQFRLWEH-------EGPITSLAL--DLTRIYSGSW--DMTVRVWDRALLKCLKVLRHSDWVYG 297 (536)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~l~~--~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~v~~ 297 (536)
+.. ....+.-. ...-..+.+ ++++++.+.. ++.|.++|+.+++.+.++.-.+. ..
T Consensus 118 t~~-------------v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-~~ 183 (386)
T 3sjl_D 118 TLL-------------PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-YH 183 (386)
T ss_dssp TCC-------------EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EE
T ss_pred CCe-------------EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-ce
Confidence 764 22222100 112334556 7888887764 68999999999999998874432 23
Q ss_pred Eeec-CCEEEE-ecCCcEEEEeCCC-CcEEEEEcccc----ccceE-EEEEe-CCCCEEEEEcCCCcEEEEEcccCcccc
Q 009373 298 LAPH-DTTVAS-TSGSDVYIWDTNS-GCLLTVVNGAH----VGNTK-SLARS-HTGDFLFTGGEDGAIHMYEIINDCTEA 368 (536)
Q Consensus 298 ~~~~-~~~l~~-~~d~~i~i~d~~~-~~~~~~~~~~~----~~~i~-~l~~~-~~~~~l~tg~~dg~i~iwd~~~~~~~~ 368 (536)
+.|. .+.+++ +.||++.+.++.+ ++...... .+ ...+. ...|. ++|++++ .+.+|.|++.|+.+...
T Consensus 184 ~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~-~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~-- 259 (386)
T 3sjl_D 184 IFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT-EVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDA-- 259 (386)
T ss_dssp EEEEETTEEEEEETTSCEEEEECCSSSCCEEEEC-CCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSC--
T ss_pred eecCCCceeEEECCCCCEEEEECCCCCeEEEeec-ceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcc--
Confidence 3343 344444 4489999999976 55433221 11 11221 23554 5665555 55689999999876531
Q ss_pred ccceeeecc---------C-CCCCeEEEEEcC--CeEEEEeC----------CCcEEEEECCcccccCCCCCCCceeeEE
Q 009373 369 NVLLVATWI---------P-HTGPVNSLAFEF--PWLVSAAG----------DGKLSLIDVRKLLRSGRPTSGKRVSRVI 426 (536)
Q Consensus 369 ~~~~~~~~~---------~-h~~~v~~l~~~~--~~l~s~s~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 426 (536)
.....+. + ..+....+++++ +.++.... .+.|.+.|+.+.+...
T Consensus 260 --~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~------------ 325 (386)
T 3sjl_D 260 --KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA------------ 325 (386)
T ss_dssp --EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE------------
T ss_pred --eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEE------------
Confidence 1111111 0 112333455554 56665532 2579999998853221
Q ss_pred eeCCCeeeeccccccEEEEEecCC-EEE-EecCCCeEEEEeCCchhhHHHH
Q 009373 427 EVEPPQRMLHGFECNLLSVDIGAD-RIV-CGGEEGIVRIWNFSQAFEIERR 475 (536)
Q Consensus 427 ~~~~~~~~~~~~~~~v~~~~~~~~-~l~-sg~~Dg~i~vW~~~~~~~~~~~ 475 (536)
...-++...-+.++++++ +|+ +...++.|.++|..+++.+.+.
T Consensus 326 ------~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 326 ------KFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV 370 (386)
T ss_dssp ------EEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred ------EEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEe
Confidence 111223333456666765 554 4567999999999998876554
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.28 E-value=3.7e-09 Score=103.34 Aligned_cols=229 Identities=14% Similarity=0.114 Sum_probs=150.4
Q ss_pred ccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCCC--cEEEEEcccCccceec
Q 009373 159 EAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTDG--FIHCWRAVEVLPHLFD 236 (536)
Q Consensus 159 ~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~ 236 (536)
.....|+++++++++++...++.|++||.+++...........+..++.++++.|+++..++ .|.+++..++..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~---- 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWA---- 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTC----
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCCceEEEEEcCCCce----
Confidence 46789999999998888888899999999987765544333322378889999999988876 788888755421
Q ss_pred ccCcccccceEEeeC-CccCEEEEEEe--CCEEEEEecCCeEEEEeCCCceEeEe----ee-ccc-c---EEEEeec-CC
Q 009373 237 ISGSEKQNTQFRLWE-HEGPITSLALD--LTRIYSGSWDMTVRVWDRALLKCLKV----LR-HSD-W---VYGLAPH-DT 303 (536)
Q Consensus 237 ~~~~~~~~~~~~~~~-h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~----~~-~~~-~---v~~~~~~-~~ 303 (536)
......+.. ....+.+++++ +..|+.+..++.|..||..++..... .. ... . =.++.++ +.
T Consensus 207 ------~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ 280 (409)
T 3hrp_A 207 ------PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSN 280 (409)
T ss_dssp ------EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTE
T ss_pred ------eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCE
Confidence 000101112 34556778884 46677777889999999987754322 11 111 1 2334464 55
Q ss_pred EEEEec-CCcEEEEeCCCCcEEEEEcccc---------------ccceEEEEEeCCCCEEEEEc-CCCcEEEEEcccCcc
Q 009373 304 TVASTS-GSDVYIWDTNSGCLLTVVNGAH---------------VGNTKSLARSHTGDFLFTGG-EDGAIHMYEIINDCT 366 (536)
Q Consensus 304 ~l~~~~-d~~i~i~d~~~~~~~~~~~~~~---------------~~~i~~l~~~~~~~~l~tg~-~dg~i~iwd~~~~~~ 366 (536)
++++.. ++.|+.|+.... +..+. ++ -.....++++|+|.++++-+ .++.|+.|++.++.
T Consensus 281 lyv~d~~~~~I~~~~~~g~--~~~~~-g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~- 356 (409)
T 3hrp_A 281 FYMSDQNLSSVYKITPDGE--CEWFC-GSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY- 356 (409)
T ss_dssp EEEEETTTTEEEEECTTCC--EEEEE-ECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-
T ss_pred EEEEeCCCCEEEEEecCCC--EEEEE-eCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-
Confidence 555555 688999997654 22221 12 23588999999999888888 88999999976652
Q ss_pred ccccceeeeccCC---------------CCCeEEEEEcC-C-eEEEEeCCCcEEEEEC
Q 009373 367 EANVLLVATWIPH---------------TGPVNSLAFEF-P-WLVSAAGDGKLSLIDV 407 (536)
Q Consensus 367 ~~~~~~~~~~~~h---------------~~~v~~l~~~~-~-~l~s~s~dg~i~vwd~ 407 (536)
+.++.++ -.....|++++ . ++++-..++.|+.+++
T Consensus 357 ------v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 357 ------VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ------EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred ------EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 2222222 24578899986 3 4444555677777764
No 204
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.27 E-value=3.8e-10 Score=107.85 Aligned_cols=183 Identities=13% Similarity=0.035 Sum_probs=122.4
Q ss_pred CceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEe
Q 009373 200 GCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWD 279 (536)
Q Consensus 200 ~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd 279 (536)
....+++++...++++|+.++ +.+|++........+.... ..... ...+.+ |+.++|+++.|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~--~~~~~-~~~lp~-V~~l~fd~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTP--LTFKW-EKEIPD-VIFVCFHGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCC--CCCSE-EEECTT-EEEEEEETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhcccccc--ccceE-EeeCCC-eeEEEECCCEEEEE-cCCcEEEEE
Confidence 456677778888888888875 4458875442111100000 11112 224566 99999988899988 889999999
Q ss_pred CCCceEeEeee-ccccEEEEeecC-CEEEEecCCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEE
Q 009373 280 RALLKCLKVLR-HSDWVYGLAPHD-TTVASTSGSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIH 357 (536)
Q Consensus 280 ~~~~~~~~~~~-~~~~v~~~~~~~-~~l~~~~d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~ 357 (536)
+.+........ +...+.++.+.. +++++.+||.+.+||+.++.... +...|++++|+|+| ++.|..||.++
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSE--EEEEETTSCEE
T ss_pred chhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCc--eEEEEcCCcEE
Confidence 98766544443 666777777433 34444459999999999887643 45689999999999 67899999999
Q ss_pred EEEcccCcc--ccccceeeecc---CCCCCeEEEEEcC--CeEEE
Q 009373 358 MYEIINDCT--EANVLLVATWI---PHTGPVNSLAFEF--PWLVS 395 (536)
Q Consensus 358 iwd~~~~~~--~~~~~~~~~~~---~h~~~v~~l~~~~--~~l~s 395 (536)
+|+...... ...+.+-..+. +|...|.+|.|.+ .++++
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 998877631 10110001112 5789999999975 35544
No 205
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.26 E-value=1.6e-09 Score=112.86 Aligned_cols=276 Identities=13% Similarity=0.043 Sum_probs=172.8
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeeeeCCCCc-----------eEEEEecCCCEEEEEeCCCcEEEEEcccCccceeccc
Q 009373 170 AKLLFTSGYDSIVRMWHLEDGFSIASSKPLGC-----------TIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDIS 238 (536)
Q Consensus 170 ~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~-----------~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 238 (536)
+..|+.++.++.|.-+|..+|+.+..+..... ....+...+..+++++.|+.|..+|..+++..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~----- 151 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEV----- 151 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEE-----
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEE-----
Confidence 56777788899999999999999888754421 01122346778999999999999999888632
Q ss_pred CcccccceEEeeCC-c----cCEE-EEEEeCCEEEEEec------CCeEEEEeCCCceEeEeeeccc-------------
Q 009373 239 GSEKQNTQFRLWEH-E----GPIT-SLALDLTRIYSGSW------DMTVRVWDRALLKCLKVLRHSD------------- 293 (536)
Q Consensus 239 ~~~~~~~~~~~~~h-~----~~v~-~l~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~------------- 293 (536)
..+..+ . ..+. .....++.++.++. ++.|+.+|..+++.+..+....
T Consensus 152 --------W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~ 223 (677)
T 1kb0_A 152 --------WHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMK 223 (677)
T ss_dssp --------EEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHH
T ss_pred --------eeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccc
Confidence 111111 0 1111 11234566666654 7999999999999988776211
Q ss_pred ----------------------cEEEEeecCCEEEEec-CC-------------------cEEEEeCCCCcEEEEEcccc
Q 009373 294 ----------------------WVYGLAPHDTTVASTS-GS-------------------DVYIWDTNSGCLLTVVNGAH 331 (536)
Q Consensus 294 ----------------------~v~~~~~~~~~l~~~~-d~-------------------~i~i~d~~~~~~~~~~~~~~ 331 (536)
...++.+++..++.+. ++ .|..+|..+|+.+..+...+
T Consensus 224 ~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~ 303 (677)
T 1kb0_A 224 RAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETP 303 (677)
T ss_dssp HHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESST
T ss_pred cccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCC
Confidence 0123446677777665 32 49999999999988775432
Q ss_pred c--------cceEEEEEeCCC---CEEEEEcCCCcEEEEEcccCccccccceee-----eccCCCCCe------------
Q 009373 332 V--------GNTKSLARSHTG---DFLFTGGEDGAIHMYEIINDCTEANVLLVA-----TWIPHTGPV------------ 383 (536)
Q Consensus 332 ~--------~~i~~l~~~~~~---~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~h~~~v------------ 383 (536)
. .....+....+| ..++.++.+|.++++|..+++......... .+.....++
T Consensus 304 ~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~ 383 (677)
T 1kb0_A 304 GDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQ 383 (677)
T ss_dssp TCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCE
T ss_pred CcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCcc
Confidence 1 223333444477 689999999999999999884321110000 000000000
Q ss_pred ------------EEEEEcC--CeEEEEeCC-------------------------------------------CcEEEEE
Q 009373 384 ------------NSLAFEF--PWLVSAAGD-------------------------------------------GKLSLID 406 (536)
Q Consensus 384 ------------~~l~~~~--~~l~s~s~d-------------------------------------------g~i~vwd 406 (536)
..++++| .++++...+ |.|..||
T Consensus 384 ~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D 463 (677)
T 1kb0_A 384 DAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWD 463 (677)
T ss_dssp ECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEE
T ss_pred EECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEe
Confidence 1467775 566665432 6677788
Q ss_pred CCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEEEeCCchhhHHHHH
Q 009373 407 VRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFEIERRA 476 (536)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~~~~~ 476 (536)
+.+++..++... +....-..+...+..++.++.||.+++||..+++.+.+..
T Consensus 464 ~~tG~~~W~~~~------------------~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 464 PVAQKAAWSVEH------------------VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp TTTTEEEEEEEE------------------SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCCcEEeecCC------------------CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeee
Confidence 777544332211 1111112344567788889999999999999998876543
No 206
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.26 E-value=5e-10 Score=117.98 Aligned_cols=265 Identities=11% Similarity=-0.025 Sum_probs=152.5
Q ss_pred cCCCEEEEEeCCC---cEEEE--ECCCCceeeee------CCCCceE--EEEecCCCEEE-----EEeCCCcEEEEEccc
Q 009373 168 ASAKLLFTSGYDS---IVRMW--HLEDGFSIASS------KPLGCTI--RAVAADKKLLV-----AGGTDGFIHCWRAVE 229 (536)
Q Consensus 168 ~~~~~l~sgs~dg---~v~iw--d~~~~~~~~~~------~~~~~~v--~~~~~~~~~l~-----sg~~dg~i~vwd~~~ 229 (536)
|+|.+++....++ .-.+| +...+....-+ .+|...+ .+++|||++|+ .|+.+.+|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 6777766555443 33444 44444332222 1333334 45679999988 445567899999988
Q ss_pred CccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCe-------------EEEEeCCCceE--eEeee--
Q 009373 230 VLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMT-------------VRVWDRALLKC--LKVLR-- 290 (536)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~-------------i~iwd~~~~~~--~~~~~-- 290 (536)
+.... ...+... ....++| +++.|+.++.|.. |++|++.++.. ...+.
T Consensus 157 g~~~~-----------~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~ 223 (695)
T 2bkl_A 157 GEWSK-----------VDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT 223 (695)
T ss_dssp CCBCS-----------SCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC
T ss_pred CCCcC-----------CcccCcc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecC
Confidence 74210 0011111 1146778 7788999988776 99999988762 22222
Q ss_pred -ccccEEEEe--ecCCEEEEec-CC----cEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEc---CCCcEEEE
Q 009373 291 -HSDWVYGLA--PHDTTVASTS-GS----DVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGG---EDGAIHMY 359 (536)
Q Consensus 291 -~~~~v~~~~--~~~~~l~~~~-d~----~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~---~dg~i~iw 359 (536)
+...+.++. ++|++++.++ ++ .|.++|..+++..... .+...+....+ ++|.+++.+. .++.|.+|
T Consensus 224 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~--~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~ 300 (695)
T 2bkl_A 224 GDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLV--KGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEV 300 (695)
T ss_dssp CCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEE--ECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEee--cCCCceEEEEe-cCCcEEEEECCCCCCCEEEEE
Confidence 334555554 8898887766 44 6777877666543333 24445555556 5666444444 25789999
Q ss_pred EcccCccccccceeeeccCC--CCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeec
Q 009373 360 EIINDCTEANVLLVATWIPH--TGPVNSLAFEF-PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLH 436 (536)
Q Consensus 360 d~~~~~~~~~~~~~~~~~~h--~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (536)
|+.++... ....+..| ...+..++++. .++++...|+..+||.+... +... ..+.
T Consensus 301 d~~~~~~~----~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~--------g~~~----------~~l~ 358 (695)
T 2bkl_A 301 DPAKPARA----SWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLK--------GKPV----------RTVQ 358 (695)
T ss_dssp BTTBCSGG----GCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETT--------CCEE----------EECC
T ss_pred eCCCCCcc----CCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCC--------CCee----------EEec
Confidence 98776210 11222333 45678888875 46777788998888876521 0000 0011
Q ss_pred cc-cccEEEEE--ecCCEEE----EecCCCeEEEEeCCchh
Q 009373 437 GF-ECNLLSVD--IGADRIV----CGGEEGIVRIWNFSQAF 470 (536)
Q Consensus 437 ~~-~~~v~~~~--~~~~~l~----sg~~Dg~i~vW~~~~~~ 470 (536)
.+ ...+..++ ++++.++ +....++|++||+.+++
T Consensus 359 ~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 359 LPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp CSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 11 22333333 3445444 44456889999998765
No 207
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.24 E-value=6.3e-12 Score=82.86 Aligned_cols=46 Identities=37% Similarity=0.488 Sum_probs=40.4
Q ss_pred ccccCCcHHHHHHHhcCCChhhHHHHhhhhHHHHHHhcCChhhHHH
Q 009373 62 STITDLPPALISEILNCLDPKELGIVSCVSPILHRLASDHHAWKEF 107 (536)
Q Consensus 62 ~~l~~Lp~ei~~~I~~~L~~~~l~~~~~v~~~~~~l~~~~~lW~~~ 107 (536)
..+..||+|++.+||+||++.+++++++|||+|+.++.++.+|+.+
T Consensus 7 ~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~~l 52 (53)
T 1fs1_A 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL 52 (53)
T ss_dssp --CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC---
T ss_pred CCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHhc
Confidence 4588999999999999999999999999999999999999999974
No 208
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.23 E-value=3.8e-10 Score=107.86 Aligned_cols=170 Identities=11% Similarity=-0.031 Sum_probs=125.8
Q ss_pred cEEEEEEecCCCEEEEEeCCCcEEEEECCCCc-----------eeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcc
Q 009373 160 AVLTVFVLASAKLLFTSGYDSIVRMWHLEDGF-----------SIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAV 228 (536)
Q Consensus 160 ~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~-----------~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~ 228 (536)
.+..+++++...++++|+.++ +++|++++.. .... ..+.. |..+..+++.|+++ .++.|++||+.
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCFHGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEEETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEECCCEEEEE-cCCcEEEEEch
Confidence 689999999999999999985 5569875433 1111 12334 66666688999999 88999999986
Q ss_pred cCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEeeeccccEEEEeecCCEEEEe
Q 009373 229 EVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVLRHSDWVYGLAPHDTTVAST 308 (536)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 308 (536)
+.. .......|..++.++.+.+..+++++.||.|.+||+.++.... +...|.+++++.+-++.+
T Consensus 115 sl~-------------~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG~~vg 178 (388)
T 1xip_A 115 ELS-------------EFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQLAVL 178 (388)
T ss_dssp STT-------------CEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSEEEEE
T ss_pred hhh-------------ccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCceEEE
Confidence 642 2233456777888888844459999999999999999877643 456788888333334555
Q ss_pred c-CCcEEEEeCCCCcE--EEEEc------c--ccccceEEEEEeCCCCEEEE
Q 009373 309 S-GSDVYIWDTNSGCL--LTVVN------G--AHVGNTKSLARSHTGDFLFT 349 (536)
Q Consensus 309 ~-d~~i~i~d~~~~~~--~~~~~------~--~~~~~i~~l~~~~~~~~l~t 349 (536)
. ||++++|+...++. ..++. . +|...|.++.|.+++.++++
T Consensus 179 ~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 179 LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 5 99999999888775 55562 1 36788999999999998876
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.23 E-value=2.7e-08 Score=92.76 Aligned_cols=232 Identities=9% Similarity=-0.015 Sum_probs=150.4
Q ss_pred eeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceee-eeCCCCceEEE--EecCCCEEEEEeCCCcEEEEEcccC
Q 009373 154 LYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIA-SSKPLGCTIRA--VAADKKLLVAGGTDGFIHCWRAVEV 230 (536)
Q Consensus 154 l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~-~~~~~~~~v~~--~~~~~~~l~sg~~dg~i~vwd~~~~ 230 (536)
+..+...+.++++.++++++++...++.|..||.. ++... ........+.. +.+++.++++...++.|..++.. +
T Consensus 57 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 134 (300)
T 2qc5_A 57 VPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-G 134 (300)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-S
T ss_pred CCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-C
Confidence 33445779999999999988877778899999988 55432 22222233444 44678877777778899999875 3
Q ss_pred ccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee--ccccEEEEe--ecCCE
Q 009373 231 LPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR--HSDWVYGLA--PHDTT 304 (536)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~--~~~~~ 304 (536)
.. ....+......+.++++ +++..++...++.|..+|. +++...... ....+.++. +++.+
T Consensus 135 ~~------------~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l 201 (300)
T 2qc5_A 135 TI------------YEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGAL 201 (300)
T ss_dssp CE------------EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSE
T ss_pred CE------------EEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCE
Confidence 21 11112223456788888 4555555555789999998 555443211 234566665 67777
Q ss_pred EEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCe
Q 009373 305 VASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPV 383 (536)
Q Consensus 305 l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v 383 (536)
+++.. .+.|.+||. +++........+...+.+++++++|.+.++...++.|..||.. +. .....+......+
T Consensus 202 ~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~-----~~~~~~~~~~~~~ 274 (300)
T 2qc5_A 202 WFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-NT-----IQEYQLQTENAEP 274 (300)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC-----EEEEECCSTTCCC
T ss_pred EEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-Cc-----EEEEECCccCCcc
Confidence 77776 578999998 5554443222345678999999999977777677899999983 31 1112223344567
Q ss_pred EEEEEcC-CeEEEEeCCCcEEEEECC
Q 009373 384 NSLAFEF-PWLVSAAGDGKLSLIDVR 408 (536)
Q Consensus 384 ~~l~~~~-~~l~s~s~dg~i~vwd~~ 408 (536)
.++++++ ..|..++.. .|..+|.+
T Consensus 275 ~~i~~~~~g~l~v~~~~-~i~~~~p~ 299 (300)
T 2qc5_A 275 HGITFGKDGSVWFALKC-KIGKLNLN 299 (300)
T ss_dssp CCEEECTTSCEEEECSS-EEEEEEEC
T ss_pred ceeEeCCCCCEEEEccC-ceEEeCCC
Confidence 8888875 456555554 67777653
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.23 E-value=3.3e-08 Score=95.18 Aligned_cols=239 Identities=9% Similarity=-0.074 Sum_probs=153.3
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEe----------CCCcEEEEECCCCceeeeeCCC---------CceEEEEecCCC
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSG----------YDSIVRMWHLEDGFSIASSKPL---------GCTIRAVAADKK 211 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs----------~dg~v~iwd~~~~~~~~~~~~~---------~~~v~~~~~~~~ 211 (536)
+.++..-..+ .++++|||++|+.+. .++.|.+||..+.+.+..+... ...-..++|+|+
T Consensus 60 ~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~ 137 (373)
T 2mad_H 60 LGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNA 137 (373)
T ss_pred EEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCC
Confidence 3444433344 899999999999886 3688999999998887765322 123457889999
Q ss_pred EEEEEeC--CCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEee
Q 009373 212 LLVAGGT--DGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVL 289 (536)
Q Consensus 212 ~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 289 (536)
+|+++.. ++.|.++| .+++ ....+....+.+.-....+..+++.+.||.+.++|. +++.....
T Consensus 138 ~l~v~n~~~~~~v~viD-~t~~-------------~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~ 202 (373)
T 2mad_H 138 DLLFFQFAAGPAVGLVV-QGGS-------------SDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAG 202 (373)
T ss_pred EEEEEecCCCCeEEEEE-CCCC-------------EEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEE
Confidence 9998874 57899999 8763 122201111222211224456777888999999999 87766432
Q ss_pred e------ccccEE---EEeec-CCEEEEecCCcEEEEeCCCCc--EEEEEcc---------ccccceEEEEEeCCCCEEE
Q 009373 290 R------HSDWVY---GLAPH-DTTVASTSGSDVYIWDTNSGC--LLTVVNG---------AHVGNTKSLARSHTGDFLF 348 (536)
Q Consensus 290 ~------~~~~v~---~~~~~-~~~l~~~~d~~i~i~d~~~~~--~~~~~~~---------~~~~~i~~l~~~~~~~~l~ 348 (536)
. ...++. .+.++ +.+++...++.+.+.|+.++. .+..+.. ........+.++|+++.++
T Consensus 203 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ly 282 (373)
T 2mad_H 203 LVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIY 282 (373)
T ss_pred eccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEE
Confidence 2 111111 12233 344555557889999997653 2222210 0122344578899998877
Q ss_pred EEcC----------CCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--C-eEEEEe-CCCcEEEEECCccccc
Q 009373 349 TGGE----------DGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--P-WLVSAA-GDGKLSLIDVRKLLRS 413 (536)
Q Consensus 349 tg~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~-~l~s~s-~dg~i~vwd~~~~~~~ 413 (536)
++.. ++.|.++|..+. +.+.++. -.....+++|++ + .++++. .++.|.++|+.+.+..
T Consensus 283 V~~~~~~~~~~~~~~~~V~VID~~t~------~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 283 LLTSEQSAWKLHAAAKEVTSVTGLVG------QTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred EEeccCCcccccCCCCeEEEEECCCC------EEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 7643 357999999888 4555553 233578999986 4 677777 5899999999986443
No 211
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.22 E-value=1.6e-08 Score=95.10 Aligned_cols=234 Identities=11% Similarity=0.064 Sum_probs=143.9
Q ss_pred EEEEecCCCEEEE-------EeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeC--CEEEEEecCC
Q 009373 203 IRAVAADKKLLVA-------GGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDL--TRIYSGSWDM 273 (536)
Q Consensus 203 v~~~~~~~~~l~s-------g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg 273 (536)
-.++.+++.++++ +..++.|.+||..++....+.. ....++...+.++++++ +.++.++.++
T Consensus 22 ~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~---------~~~~~~~~~~~~i~~~~~~g~l~v~~~~~ 92 (314)
T 1pjx_A 22 GPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK---------PEVNGYGGIPAGCQCDRDANQLFVADMRL 92 (314)
T ss_dssp EEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC---------CEETTEECCEEEEEECSSSSEEEEEETTT
T ss_pred CceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe---------cccCCCCCCCceEEEecCCCcEEEEECCC
Confidence 3445577877777 6788999999986654211100 00112446788999943 4666666566
Q ss_pred eEEEEeCCCceEeEe-ee-----ccccEEEEe--ecCCEEEEec-C---------------CcEEEEeCCCCcEEEEEcc
Q 009373 274 TVRVWDRALLKCLKV-LR-----HSDWVYGLA--PHDTTVASTS-G---------------SDVYIWDTNSGCLLTVVNG 329 (536)
Q Consensus 274 ~i~iwd~~~~~~~~~-~~-----~~~~v~~~~--~~~~~l~~~~-d---------------~~i~i~d~~~~~~~~~~~~ 329 (536)
.|.+||.. ++.... .. ....+.++. ++++++++.. + +.|..||.. ++.....
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-- 168 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-- 168 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE--
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec--
Confidence 89999988 665443 22 112355555 7788887766 3 467888876 5543332
Q ss_pred ccccceEEEEEe----CCCCEEE-EEcCCCcEEEEEcccCccccccceeeeccCCC-CCeEEEEEcC--CeEEEEeCCCc
Q 009373 330 AHVGNTKSLARS----HTGDFLF-TGGEDGAIHMYEIINDCTEANVLLVATWIPHT-GPVNSLAFEF--PWLVSAAGDGK 401 (536)
Q Consensus 330 ~~~~~i~~l~~~----~~~~~l~-tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~~--~~l~s~s~dg~ 401 (536)
.+......++++ |+++.++ +...++.|.+||+..............+..+. ..+..+++++ .++++...++.
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE
Confidence 244567889999 9997554 44668899999986321111112233344444 6678899975 55666667889
Q ss_pred EEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEe--cCC-EEEEecCCCeEEEEeCCc
Q 009373 402 LSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDI--GAD-RIVCGGEEGIVRIWNFSQ 468 (536)
Q Consensus 402 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~sg~~Dg~i~vW~~~~ 468 (536)
|.+||..++... ..+..+...+.++.+ +++ .+++...++.|..|++..
T Consensus 249 i~~~d~~~g~~~-------------------~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 249 IEVFGPDGGQPK-------------------MRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEECTTCBSCS-------------------EEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEcCCCCcEe-------------------EEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 999998753211 111122234455554 555 556666778999999875
No 212
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.19 E-value=4.3e-13 Score=129.63 Aligned_cols=252 Identities=12% Similarity=-0.024 Sum_probs=133.9
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEE
Q 009373 169 SAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFR 248 (536)
Q Consensus 169 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 248 (536)
++..+++++.||.|+.||..+|+.+..+.........+..++..+++++.||.|+.||..+++.. ..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~-------------w~ 74 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGL-------------TK 74 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEECTTTCCEEEC-----CCS-------------EE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEeCCCCEEEEEECCCCcee-------------ee
Confidence 47889999999999999999999988876521111122356778888899999999999877521 11
Q ss_pred eeCC------ccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEeeeccccEEEEeecCCEEEEec-CCcEEEEeCCCC
Q 009373 249 LWEH------EGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVLRHSDWVYGLAPHDTTVASTS-GSDVYIWDTNSG 321 (536)
Q Consensus 249 ~~~h------~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-d~~i~i~d~~~~ 321 (536)
...+ ..++. ..++.+++++.|+.|+.||..+|+.+..+..... ...+|++..+++++ ++.|+.||.++|
T Consensus 75 ~~~~~~~~~~~sp~~---~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-~~~~p~~~~v~~~~~dg~v~a~d~~tG 150 (369)
T 2hz6_A 75 LPFTIPELVQASPCR---SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-DSLSPSTSLLYLGRTEYTITMYDTKTR 150 (369)
T ss_dssp CSCCHHHHHTTCSCC--------CCCCEEEEEEEEECCC-----------------------EEEEEEEEEEECCCSSSS
T ss_pred eeccCccccccCceE---ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-ccccccCCEEEEEecCCEEEEEECCCC
Confidence 1111 11111 1456788899999999999999999887763332 22345666777666 899999999999
Q ss_pred cEEEEEccccccceEEEEEeCCC---CEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEE-EEEcCC-eEEE-
Q 009373 322 CLLTVVNGAHVGNTKSLARSHTG---DFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNS-LAFEFP-WLVS- 395 (536)
Q Consensus 322 ~~~~~~~~~~~~~i~~l~~~~~~---~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~-l~~~~~-~l~s- 395 (536)
+.+..+.. + ......+.++. ..+++++.||.|+.||..++ ..+.... ...++.. ..++++ .+..
T Consensus 151 ~~~W~~~~-~--~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG------~~~W~~~-~~~pv~~~~~~~~dg~~~v~ 220 (369)
T 2hz6_A 151 ELRWNATY-F--DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG------DVLWIQN-YASPVVAFYVWQREGLRKVM 220 (369)
T ss_dssp SCCCEEEE-E--EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC------CEEEEEE-CSSCEEEEEECTTSSCEEEC
T ss_pred CEEEeEec-c--cccCccccCCccccceEEEECCCCEEEEEECCCC------cEEEEec-CCCceEEEEEecCCceEecc
Confidence 87766531 1 11223333332 56778889999999999888 3333333 2334433 222321 1110
Q ss_pred --EeCCCcEEEEECCccc----ccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEEEeCC
Q 009373 396 --AAGDGKLSLIDVRKLL----RSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFS 467 (536)
Q Consensus 396 --~s~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~ 467 (536)
...++.++.+|..++. ..+....+..+ . ..+ ..+..++.++.||.++.++..
T Consensus 221 ~~~~~~~~l~~ld~~tG~~~~~~~W~~~~~~~~-------------~---sp~----~~~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 221 HINVAVETLRYLTFMSGEVGRITKWKYPFPKET-------------E---AKS----KLTPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp CEEEEHHHHHHHHHHHHHHHHHHTSCCCCCCHH-------------H---HHH----HSEEEECBEECSSCEECCEEE
T ss_pred ceeecccceeeeehhcCCcccceeeeeccCccc-------------c---ccc----cccceEEEecccCCEEecCcc
Confidence 0113456667766655 44433222110 0 111 223477778888888888876
No 213
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.18 E-value=7.7e-09 Score=108.01 Aligned_cols=190 Identities=14% Similarity=0.077 Sum_probs=121.6
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeeeeCCCCce-----------EEEEecCCCEEEEEeCCCcEEEEEcccCccceeccc
Q 009373 170 AKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCT-----------IRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDIS 238 (536)
Q Consensus 170 ~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~-----------v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 238 (536)
+..|+.++.++.|..+|..+|+.+..+...... .......+..+++++.|+.|..+|..+++..- ...
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W-~~~ 148 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAW-SVD 148 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEE-EEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEee-eec
Confidence 667788888999999999999998887543210 01122356789999999999999999886321 110
Q ss_pred CcccccceEEeeCCccCEEEEEEeCCEEEEEe------cCCeEEEEeCCCceEeEeeecc--c-----------------
Q 009373 239 GSEKQNTQFRLWEHEGPITSLALDLTRIYSGS------WDMTVRVWDRALLKCLKVLRHS--D----------------- 293 (536)
Q Consensus 239 ~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s------~dg~i~iwd~~~~~~~~~~~~~--~----------------- 293 (536)
....... .......+ ...++.++.++ .+|.|..||..+++.+..+... .
T Consensus 149 ~~~~~~~--~~~~~~sP----~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 222 (689)
T 1yiq_A 149 TRADHKR--SYTITGAP----RVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTW 222 (689)
T ss_dssp CCSCTTS--CCBCCSCC----EEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTC
T ss_pred CcCCCCC--CccccCCc----EEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccccc
Confidence 0000000 00001112 12345555554 3789999999999998776510 0
Q ss_pred ---------------cEEEEeecCCEEEEec-CC-------------------cEEEEeCCCCcEEEEEccc-cc-----
Q 009373 294 ---------------WVYGLAPHDTTVASTS-GS-------------------DVYIWDTNSGCLLTVVNGA-HV----- 332 (536)
Q Consensus 294 ---------------~v~~~~~~~~~l~~~~-d~-------------------~i~i~d~~~~~~~~~~~~~-~~----- 332 (536)
...++.+...+++.+. ++ .|..+|..+|+.+..+... |.
T Consensus 223 ~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~ 302 (689)
T 1yiq_A 223 FGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYT 302 (689)
T ss_dssp CSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCC
T ss_pred CCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccccc
Confidence 0124446667777776 44 3999999999998877532 21
Q ss_pred --cceEEEEEeCCCC---EEEEEcCCCcEEEEEcccCcc
Q 009373 333 --GNTKSLARSHTGD---FLFTGGEDGAIHMYEIINDCT 366 (536)
Q Consensus 333 --~~i~~l~~~~~~~---~l~tg~~dg~i~iwd~~~~~~ 366 (536)
..+.......+|+ .++.++.+|.++++|..+++.
T Consensus 303 ~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 303 ATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 1222223333564 788999999999999988853
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.15 E-value=3.4e-09 Score=111.35 Aligned_cols=235 Identities=11% Similarity=0.017 Sum_probs=145.0
Q ss_pred CccccEEEEEEecCCCEEEE-----EeCCCcEEEEECCCCceeee-eCCCCceEEEEecCCCEEEEEeCCCc--------
Q 009373 156 GHTEAVLTVFVLASAKLLFT-----SGYDSIVRMWHLEDGFSIAS-SKPLGCTIRAVAADKKLLVAGGTDGF-------- 221 (536)
Q Consensus 156 ~h~~~V~~v~~~~~~~~l~s-----gs~dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~l~sg~~dg~-------- 221 (536)
+|...+..++|||||++||- |+.+.+|++||+.+++.+.. +........+++ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 46678999999999998883 33346799999999986553 221112334677 9998988887743
Q ss_pred -----EEEEEcccCccceecccCcccccceEEeeC-CccCEEEEEE--eCCEEEEEec----CCeEEEEeCCCce-EeEe
Q 009373 222 -----IHCWRAVEVLPHLFDISGSEKQNTQFRLWE-HEGPITSLAL--DLTRIYSGSW----DMTVRVWDRALLK-CLKV 288 (536)
Q Consensus 222 -----i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~--~~~~l~s~s~----dg~i~iwd~~~~~-~~~~ 288 (536)
|++|++.++.. ....+..... |...+.++.+ ++++|+.... +..|.++|+.++. ....
T Consensus 205 ~~~~~v~~~~lgt~~~---------~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQE---------DDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp CCCCEEEEEETTSCGG---------GCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE
T ss_pred CCCcEEEEEECCCCcc---------cceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE
Confidence 89998866521 0112222223 4445677788 7777654332 3589999997763 2333
Q ss_pred ee-ccccEEE-EeecCCEEEE-ec-C---CcEEEEeCCCCcE--EEEEccccccceEEEEEeCCCCEEEEEcCCC---cE
Q 009373 289 LR-HSDWVYG-LAPHDTTVAS-TS-G---SDVYIWDTNSGCL--LTVVNGAHVGNTKSLARSHTGDFLFTGGEDG---AI 356 (536)
Q Consensus 289 ~~-~~~~v~~-~~~~~~~l~~-~~-d---~~i~i~d~~~~~~--~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg---~i 356 (536)
+. +...... +.+++..|+. +. + +.|..+|+.++.. ...+. .|...+. .|+++++.|+....++ .|
T Consensus 276 l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~--~~s~~g~~lv~~~~~~g~~~l 352 (693)
T 3iuj_A 276 VQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI-PERQQVL--TVHSGSGYLFAEYMVDATARV 352 (693)
T ss_dssp EECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE-CCCSSCE--EEEEETTEEEEEEEETTEEEE
T ss_pred EeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe-cCCCCEE--EEEEECCEEEEEEEECCeeEE
Confidence 33 3333333 5666665544 43 3 5699999988754 23443 3544454 8899998877766543 58
Q ss_pred EEEEcccCccccccceeeec-cCCCCCeEEEEEcC--CeEEEEeCC----CcEEEEECCcc
Q 009373 357 HMYEIINDCTEANVLLVATW-IPHTGPVNSLAFEF--PWLVSAAGD----GKLSLIDVRKL 410 (536)
Q Consensus 357 ~iwd~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~--~~l~s~s~d----g~i~vwd~~~~ 410 (536)
++||+.... ...+ ....+.+..+.+++ +.|+....+ +.|+.||+.++
T Consensus 353 ~~~d~~g~~-------~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 353 EQFDYEGKR-------VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp EEECTTSCE-------EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred EEEECCCCe-------eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 888877541 1222 23345566666653 444433333 78999998764
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.14 E-value=1.4e-08 Score=98.35 Aligned_cols=274 Identities=12% Similarity=0.062 Sum_probs=168.8
Q ss_pred cCCCEEEEEeC-C----CcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEe----------CCCcEEEEEcccCcc
Q 009373 168 ASAKLLFTSGY-D----SIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGG----------TDGFIHCWRAVEVLP 232 (536)
Q Consensus 168 ~~~~~l~sgs~-d----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~----------~dg~i~vwd~~~~~~ 232 (536)
++++.++.... + +.|.++|..+++.+.++.....+-..++|+++.++++. .++.|.++|..+.+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 45665555544 2 69999999999999888544444677889999888876 467899999987641
Q ss_pred ceecccCcccccceEEee-C------CccCEEEEEE--eCCEEEEEec--CCeEEEEeCCCceEeEeeeccccEEEEeec
Q 009373 233 HLFDISGSEKQNTQFRLW-E------HEGPITSLAL--DLTRIYSGSW--DMTVRVWDRALLKCLKVLRHSDWVYGLAPH 301 (536)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~-~------h~~~v~~l~~--~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~ 301 (536)
...+. + .......+.+ ++++++.+.. ++.|.+.|+.+++.+..+.-... ..+.|+
T Consensus 162 -------------v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-~~~~p~ 227 (426)
T 3c75_H 162 -------------IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-YHIFPA 227 (426)
T ss_dssp -------------EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEE
T ss_pred -------------EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-eeeccC
Confidence 11111 0 0112234555 7888888764 58999999999999988874332 233443
Q ss_pred C-CEEEE-ecCCcEEEEeCCCCcEEEEEc---cccccc-eEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeee
Q 009373 302 D-TTVAS-TSGSDVYIWDTNSGCLLTVVN---GAHVGN-TKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVAT 375 (536)
Q Consensus 302 ~-~~l~~-~~d~~i~i~d~~~~~~~~~~~---~~~~~~-i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~ 375 (536)
+ ..+++ +.||++.+.+..+++...... .....+ ...+.+.+++..++..+..+.|.+.|+........ .....
T Consensus 228 g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~-~~~~~ 306 (426)
T 3c75_H 228 SPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFR-APIEA 306 (426)
T ss_dssp ETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEEC-CCEES
T ss_pred CCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEe-eeeee
Confidence 3 44444 448998888886665543210 001111 12356788988877778889999999865421100 00000
Q ss_pred cc----C---CCCCeEEEEEcC--CeEEEEeC----------CCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeec
Q 009373 376 WI----P---HTGPVNSLAFEF--PWLVSAAG----------DGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLH 436 (536)
Q Consensus 376 ~~----~---h~~~v~~l~~~~--~~l~s~s~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (536)
.. . .......+++++ +++++... ++.|.++|..+.+.... + .-
T Consensus 307 ~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~---------I---------~v 368 (426)
T 3c75_H 307 LTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINK---------I---------EL 368 (426)
T ss_dssp SCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE---------E---------EE
T ss_pred ccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEE---------E---------EC
Confidence 00 0 011112256654 55555432 35799999988532211 1 11
Q ss_pred cccccEEEEEecCC-EEEEec-CCCeEEEEeCCchhhHHH
Q 009373 437 GFECNLLSVDIGAD-RIVCGG-EEGIVRIWNFSQAFEIER 474 (536)
Q Consensus 437 ~~~~~v~~~~~~~~-~l~sg~-~Dg~i~vW~~~~~~~~~~ 474 (536)
+....-..++++++ ++++.. .++.|.++|..+++.+.+
T Consensus 369 g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 369 GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEE
Confidence 22234446667777 777776 699999999999887654
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.13 E-value=1.8e-08 Score=95.91 Aligned_cols=237 Identities=12% Similarity=0.020 Sum_probs=155.3
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEe----------CCCcEEEEECCCCceeeeeCC---------CCceEEEEecCCC
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSG----------YDSIVRMWHLEDGFSIASSKP---------LGCTIRAVAADKK 211 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs----------~dg~v~iwd~~~~~~~~~~~~---------~~~~v~~~~~~~~ 211 (536)
+.++..-..+ .++++|||+++++++ .++.|.+||..+++.+.++.. ....-..++|||+
T Consensus 72 ~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk 149 (386)
T 3sjl_D 72 IGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK 149 (386)
T ss_dssp EEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS
T ss_pred EEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCC
Confidence 3444433344 399999999887765 367899999999998887632 1234578899999
Q ss_pred EEEEEeC--CCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE-eCCEEEEEecCCeEEEEeCCC-ceEeE
Q 009373 212 LLVAGGT--DGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL-DLTRIYSGSWDMTVRVWDRAL-LKCLK 287 (536)
Q Consensus 212 ~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~dg~i~iwd~~~-~~~~~ 287 (536)
+++++.. ++.|.++|+.+++ ...++.-. + ...+.- ....+++.+.||.+.+.++.+ ++...
T Consensus 150 ~lyVan~~~~~~VsVID~~t~~-------------vv~tI~v~-g-~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~ 214 (386)
T 3sjl_D 150 TLLFYQFSPAPAVGVVDLEGKA-------------FKRMLDVP-D-CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI 214 (386)
T ss_dssp EEEEEECSSSCEEEEEETTTTE-------------EEEEEECC-S-EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEE
T ss_pred EEEEEEcCCCCeEEEEECCCCc-------------EEEEEECC-C-cceeecCCCceeEEECCCCCEEEEECCCCCeEEE
Confidence 9988864 6899999998763 22222211 1 111112 556788889999999999876 55432
Q ss_pred eee-----ccccEE---EEe-ecCCEEEEecCCcEEEEeCCCCc--EEEEEc---------cccccceEEEEEeCCCCEE
Q 009373 288 VLR-----HSDWVY---GLA-PHDTTVASTSGSDVYIWDTNSGC--LLTVVN---------GAHVGNTKSLARSHTGDFL 347 (536)
Q Consensus 288 ~~~-----~~~~v~---~~~-~~~~~l~~~~d~~i~i~d~~~~~--~~~~~~---------~~~~~~i~~l~~~~~~~~l 347 (536)
... ....+. .+. ++|++++.+.++.|++.|+.++. ....+. .-..+....++++++++.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~l 294 (386)
T 3sjl_D 215 THTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRI 294 (386)
T ss_dssp EECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEE
T ss_pred eecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeE
Confidence 211 111221 233 57777777778999999997664 222221 0012334457789999888
Q ss_pred EEEcC----------CCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--C-eEEEEe-CCCcEEEEECCccc
Q 009373 348 FTGGE----------DGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--P-WLVSAA-GDGKLSLIDVRKLL 411 (536)
Q Consensus 348 ~tg~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~-~l~s~s-~dg~i~vwd~~~~~ 411 (536)
++... .+.|.++|+.+. +.+..+.. ...+++|++++ + +|+++. .++.|.++|..+++
T Consensus 295 yV~~~~~~~~~hk~~~~~V~viD~~t~------kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 295 YLLVDQRDEWRHKTASRFVVVLDAKTG------ERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp EEEEEECCTTCTTSCEEEEEEEETTTC------CEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred EEEeccccccccCCCCCEEEEEECCCC------eEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 77643 246999999988 44444332 23678899975 3 666654 48999999998853
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.08 E-value=2.8e-07 Score=85.96 Aligned_cols=225 Identities=9% Similarity=-0.036 Sum_probs=137.1
Q ss_pred eCccccEEEEEEecC-CCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcccCccc
Q 009373 155 YGHTEAVLTVFVLAS-AKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPH 233 (536)
Q Consensus 155 ~~h~~~V~~v~~~~~-~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 233 (536)
..+..---+..|+|+ +.++++...++.|..||..+++.............++.++++++++ . ++.|.+||..++...
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAV 86 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEE
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEE
Confidence 334445567889995 5567777788999999998876533222223334455688885544 4 568999998765321
Q ss_pred eecccCcccccceEEee--CCccCEEEEEE--eCCEEEEEecC---------CeEEEEeCCC-ceEeEeeeccccEEEEe
Q 009373 234 LFDISGSEKQNTQFRLW--EHEGPITSLAL--DLTRIYSGSWD---------MTVRVWDRAL-LKCLKVLRHSDWVYGLA 299 (536)
Q Consensus 234 ~~~~~~~~~~~~~~~~~--~h~~~v~~l~~--~~~~l~s~s~d---------g~i~iwd~~~-~~~~~~~~~~~~v~~~~ 299 (536)
. ..... .....+.++++ +++.+++...+ ..-.+|.+.. ++...........+.++
T Consensus 87 ~-----------~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~ 155 (297)
T 3g4e_A 87 V-----------LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLD 155 (297)
T ss_dssp E-----------EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEE
T ss_pred E-----------EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceE
Confidence 1 11111 11234778888 45544443221 2234444432 33333333333344444
Q ss_pred --ecCCEEEEe-c-CCcEEEEeC--CCCcEE--EEEc--cccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccc
Q 009373 300 --PHDTTVAST-S-GSDVYIWDT--NSGCLL--TVVN--GAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEAN 369 (536)
Q Consensus 300 --~~~~~l~~~-~-d~~i~i~d~--~~~~~~--~~~~--~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~ 369 (536)
++++.++.+ + ++.|.+||+ .++... ..+. ..+.+.+..++++++|++.++....+.|.+||..++
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG----- 230 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG----- 230 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC-----
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc-----
Confidence 788766544 4 688999987 455432 1121 123457889999999998888777888999999877
Q ss_pred cceeeeccCCCCCeEEEEEc-C--CeEEEEeC
Q 009373 370 VLLVATWIPHTGPVNSLAFE-F--PWLVSAAG 398 (536)
Q Consensus 370 ~~~~~~~~~h~~~v~~l~~~-~--~~l~s~s~ 398 (536)
..+..+..+...+++++|. | +.|+.++.
T Consensus 231 -~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 231 -KRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp -CEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred -eEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 4556666666789999997 3 45554443
No 218
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.08 E-value=1.3e-08 Score=108.00 Aligned_cols=265 Identities=13% Similarity=0.013 Sum_probs=150.8
Q ss_pred ecCCCEEEEEeCCCc---EEEEEC--C---CCceeeee------CCCCce--EEEEecCCCEEEEEeCC-----CcEEEE
Q 009373 167 LASAKLLFTSGYDSI---VRMWHL--E---DGFSIASS------KPLGCT--IRAVAADKKLLVAGGTD-----GFIHCW 225 (536)
Q Consensus 167 ~~~~~~l~sgs~dg~---v~iwd~--~---~~~~~~~~------~~~~~~--v~~~~~~~~~l~sg~~d-----g~i~vw 225 (536)
+|+|++++....++. -.+|.. . .+....-+ .++... -.+++|||++|+.++.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 378887776554432 455544 3 33322211 222222 34667999998887654 459999
Q ss_pred EcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCe--------------EEEEeCCCceE--eE
Q 009373 226 RAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMT--------------VRVWDRALLKC--LK 287 (536)
Q Consensus 226 d~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~--------------i~iwd~~~~~~--~~ 287 (536)
|+.++... ....+...+..++| + +.|+.++.|+. |++|++.++.. ..
T Consensus 195 dl~tg~~~--------------~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~l 259 (741)
T 1yr2_A 195 GVADGKPL--------------ADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQP 259 (741)
T ss_dssp ETTTCCEE--------------EEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEE
T ss_pred ECCCCCCC--------------CccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEE
Confidence 99887421 11111111246677 6 78887776654 89999987652 22
Q ss_pred eee---ccccEEEE--eecCCEEEEec-CC-----cEEEEeCCCC--cEEEEEccccccceEEEEEeCCCCEEEEEcCC-
Q 009373 288 VLR---HSDWVYGL--APHDTTVASTS-GS-----DVYIWDTNSG--CLLTVVNGAHVGNTKSLARSHTGDFLFTGGED- 353 (536)
Q Consensus 288 ~~~---~~~~v~~~--~~~~~~l~~~~-d~-----~i~i~d~~~~--~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~d- 353 (536)
.+. +...+..+ +++|++++... ++ .|++||+.++ +....+.. +...+... ++|+|+.|+..+.+
T Consensus 260 v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~~~~-~~~dg~~l~~~s~~~ 337 (741)
T 1yr2_A 260 VFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP-DLKAQWDF-VDGVGDQLWFVSGDG 337 (741)
T ss_dssp EECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC-SSSSCEEE-EEEETTEEEEEECTT
T ss_pred EeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC-CCCceEEE-EeccCCEEEEEECCC
Confidence 222 22235554 48998887665 33 7999999887 31344432 33344444 34889888877654
Q ss_pred ---CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeC
Q 009373 354 ---GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF-PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVE 429 (536)
Q Consensus 354 ---g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 429 (536)
+.|.+||+.++. . .....+..+...+.+++++. .++++...|+..+||.+... +...
T Consensus 338 ~~~~~l~~~d~~~~~--~--~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~--------g~~~------- 398 (741)
T 1yr2_A 338 APLKKIVRVDLSGST--P--RFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLD--------GKPA------- 398 (741)
T ss_dssp CTTCEEEEEECSSSS--C--EEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETT--------SCEE-------
T ss_pred CCCCEEEEEeCCCCc--c--ccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCC--------CCce-------
Confidence 459999987641 0 11222234455677778765 46677788988887765421 0000
Q ss_pred CCeeeecc-ccccEEEEEe--cCCEEE----EecCCCeEEEEeCCchh
Q 009373 430 PPQRMLHG-FECNLLSVDI--GADRIV----CGGEEGIVRIWNFSQAF 470 (536)
Q Consensus 430 ~~~~~~~~-~~~~v~~~~~--~~~~l~----sg~~Dg~i~vW~~~~~~ 470 (536)
..+.. ....+..+++ +++.++ +....++|++||+.+++
T Consensus 399 ---~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 399 ---GAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp ---EECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred ---eeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 11111 1234445554 444343 34456899999998765
No 219
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.06 E-value=4e-08 Score=102.59 Aligned_cols=239 Identities=11% Similarity=0.068 Sum_probs=146.0
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeeeeCCC--Cc---eEE--EEecCCCEEEEEe------CCCcEEEEEcccCccce-e
Q 009373 170 AKLLFTSGYDSIVRMWHLEDGFSIASSKPL--GC---TIR--AVAADKKLLVAGG------TDGFIHCWRAVEVLPHL-F 235 (536)
Q Consensus 170 ~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~--~~---~v~--~~~~~~~~l~sg~------~dg~i~vwd~~~~~~~~-~ 235 (536)
+..++.++.|+.|..+|..+|+.+..+... .. .+. -+..+ ..+++++ .+|.|..||..+++..- +
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVN-GKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEEC-CEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 567888999999999999999988776442 10 110 01123 4455554 37899999999987421 1
Q ss_pred cccC-ccccc----ce----EEe--------eCCccCEEEEEE--eCCEEEEEecCCe-------------------EEE
Q 009373 236 DISG-SEKQN----TQ----FRL--------WEHEGPITSLAL--DLTRIYSGSWDMT-------------------VRV 277 (536)
Q Consensus 236 ~~~~-~~~~~----~~----~~~--------~~h~~~v~~l~~--~~~~l~s~s~dg~-------------------i~i 277 (536)
.... ..... .. ... .++......+++ +.+.++.++.++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 1000 00000 00 000 011111124556 4578888887764 999
Q ss_pred EeCCCceEeEeee---ccc-------cE--EEEeecCC---EEEEec-CCcEEEEeCCCCcEEEEEcccccc--------
Q 009373 278 WDRALLKCLKVLR---HSD-------WV--YGLAPHDT---TVASTS-GSDVYIWDTNSGCLLTVVNGAHVG-------- 333 (536)
Q Consensus 278 wd~~~~~~~~~~~---~~~-------~v--~~~~~~~~---~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~-------- 333 (536)
+|..+++.+..++ +.. .. ..+..+++ .++.++ +|.++++|..+|+.+.........
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 9999999998876 211 11 12224554 666666 899999999999987544321100
Q ss_pred ------------------------------ceEEEEEeCCCCEEEEEcC-------------------------------
Q 009373 334 ------------------------------NTKSLARSHTGDFLFTGGE------------------------------- 352 (536)
Q Consensus 334 ------------------------------~i~~l~~~~~~~~l~tg~~------------------------------- 352 (536)
.-..++++|+..+++++..
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM 439 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred CCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence 0112678888888777632
Q ss_pred --------------CCcEEEEEcccCccccccceeeeccCCCCCeE-EEEEcCCeEEEEeCCCcEEEEECCcccccCC
Q 009373 353 --------------DGAIHMYEIINDCTEANVLLVATWIPHTGPVN-SLAFEFPWLVSAAGDGKLSLIDVRKLLRSGR 415 (536)
Q Consensus 353 --------------dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~-~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~ 415 (536)
+|.|+.||+.++ +.+-....+..... .+.-.+..+++++.||.|+.||.++++..++
T Consensus 440 p~~~~~~~~~~~~~~g~l~A~D~~tG------~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~ 511 (689)
T 1yiq_A 440 PEGAEGLLEMAKSWSGKLIAWDPVKQ------QAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWE 511 (689)
T ss_dssp CSSHHHHHHHHTTCEEEEEEEETTTT------EEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CcccccCCCCCCCcceeEEEEECCCC------CeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCcccee
Confidence 377999999888 33333332221111 3334568999999999999999999766554
No 220
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.05 E-value=6.7e-08 Score=100.72 Aligned_cols=240 Identities=12% Similarity=0.129 Sum_probs=149.0
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeeeeCCC-C----ceEE-EEecCCCEEEEEeC------CCcEEEEEcccCcccee-
Q 009373 169 SAKLLFTSGYDSIVRMWHLEDGFSIASSKPL-G----CTIR-AVAADKKLLVAGGT------DGFIHCWRAVEVLPHLF- 235 (536)
Q Consensus 169 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-~----~~v~-~~~~~~~~l~sg~~------dg~i~vwd~~~~~~~~~- 235 (536)
.+..|+.++.|+.|..+|..+|+.+..+... . ..+. .-...+..+++++. +|.|+.+|..+++..-.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 3668888999999999999999998877544 1 1111 11123456666654 79999999998863211
Q ss_pred cccCcccc------------------cceEEeeCCccCEEEEEE--eCCEEEEEecCC-------------------eEE
Q 009373 236 DISGSEKQ------------------NTQFRLWEHEGPITSLAL--DLTRIYSGSWDM-------------------TVR 276 (536)
Q Consensus 236 ~~~~~~~~------------------~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg-------------------~i~ 276 (536)
........ .......+.......+++ +++.++.++.++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 11000000 000000011111224455 567788777664 599
Q ss_pred EEeCCCceEeEeee---cc--------cc-EEEEeecC---CEEEEec-CCcEEEEeCCCCcEEEEEcccccc-------
Q 009373 277 VWDRALLKCLKVLR---HS--------DW-VYGLAPHD---TTVASTS-GSDVYIWDTNSGCLLTVVNGAHVG------- 333 (536)
Q Consensus 277 iwd~~~~~~~~~~~---~~--------~~-v~~~~~~~---~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~------- 333 (536)
.+|..+++.+..++ +. .+ +.....+| ..++.++ +|.++++|..+|+.+..+......
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~ 366 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDK 366 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECT
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCC
Confidence 99999999988876 21 11 12222466 5677776 899999999999998776422110
Q ss_pred ---ce------------------------EEEEEeCCCCEEEEEcCC---------------------------------
Q 009373 334 ---NT------------------------KSLARSHTGDFLFTGGED--------------------------------- 353 (536)
Q Consensus 334 ---~i------------------------~~l~~~~~~~~l~tg~~d--------------------------------- 353 (536)
.+ ..++++|++.++++...+
T Consensus 367 ~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 446 (677)
T 1kb0_A 367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFF 446 (677)
T ss_dssp TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEE
T ss_pred CCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccccc
Confidence 11 146889988888776432
Q ss_pred ----------CcEEEEEcccCccccccceeeeccCCCCCeEE--EEEcCCeEEEEeCCCcEEEEECCcccccCC
Q 009373 354 ----------GAIHMYEIINDCTEANVLLVATWIPHTGPVNS--LAFEFPWLVSAAGDGKLSLIDVRKLLRSGR 415 (536)
Q Consensus 354 ----------g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~--l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~ 415 (536)
|.|..||+.+++ .+.... +..++.+ +...+..++.++.||.+++||.++++..+.
T Consensus 447 ~~~~~~~~~~g~l~A~D~~tG~------~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~ 513 (677)
T 1kb0_A 447 NAEPPKSKPFGRLLAWDPVAQK------AAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWE 513 (677)
T ss_dssp CSSCCCSCCEEEEEEEETTTTE------EEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ccccCCCCCccEEEEEeCCCCc------EEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeee
Confidence 779999998883 333322 2222332 333567899999999999999998755543
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.05 E-value=6.3e-07 Score=84.71 Aligned_cols=216 Identities=13% Similarity=0.021 Sum_probs=130.8
Q ss_pred cEEEEEEecC-CCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcccCccceeccc
Q 009373 160 AVLTVFVLAS-AKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDIS 238 (536)
Q Consensus 160 ~V~~v~~~~~-~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 238 (536)
-..+..|+|+ +.+++++..++.|..||..+++..............+.++++++++. .+ .|.+||..++....+
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~--- 124 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLH--- 124 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEE---
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEE---
Confidence 4567889997 55667777789999999988764332222222233445788766654 44 499999876642111
Q ss_pred CcccccceEEee--CCccCEEEEEE--eCCEEEEEec------CCeEEEEeCCCceEeEeeeccccEEEE--eecCCEEE
Q 009373 239 GSEKQNTQFRLW--EHEGPITSLAL--DLTRIYSGSW------DMTVRVWDRALLKCLKVLRHSDWVYGL--APHDTTVA 306 (536)
Q Consensus 239 ~~~~~~~~~~~~--~h~~~v~~l~~--~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~v~~~--~~~~~~l~ 306 (536)
.... .....+.++++ +++.+++... .+.|..+| +++.............+ +++++.++
T Consensus 125 --------~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~ly 194 (326)
T 2ghs_A 125 --------AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGY 194 (326)
T ss_dssp --------ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEE
T ss_pred --------eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEE
Confidence 0000 11235778888 4555544332 24566666 45543333332334444 47887665
Q ss_pred Ee-c-CCcEEEEeCC--CC-cE-----EEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeec
Q 009373 307 ST-S-GSDVYIWDTN--SG-CL-----LTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATW 376 (536)
Q Consensus 307 ~~-~-d~~i~i~d~~--~~-~~-----~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~ 376 (536)
.+ . ++.|.+||+. ++ .. ...+. .....+..++++++|.+.++...++.|.+||. ++ ..+..+
T Consensus 195 v~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~-~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g------~~~~~i 266 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLDARTGLPTGKAEVFIDST-GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DG------NHIARY 266 (326)
T ss_dssp EEETTTCEEEEEEBCTTTCCBSSCCEEEEECT-TSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TC------CEEEEE
T ss_pred EEECCCCEEEEEEcccccCCcccCceEEEECC-CCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CC------CEEEEE
Confidence 44 3 6889999986 55 31 22221 23456788999999988777767788999997 34 234445
Q ss_pred cCCCCCeEEEEEc-C--CeEEEEeC
Q 009373 377 IPHTGPVNSLAFE-F--PWLVSAAG 398 (536)
Q Consensus 377 ~~h~~~v~~l~~~-~--~~l~s~s~ 398 (536)
..+...+++++|+ + +.|+.++.
T Consensus 267 ~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 267 EVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp ECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred ECCCCCcEEEEEecCCCCEEEEEec
Confidence 5566679999997 4 45555444
No 222
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.01 E-value=8.8e-09 Score=97.72 Aligned_cols=263 Identities=11% Similarity=0.009 Sum_probs=157.8
Q ss_pred CccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcccCcccee
Q 009373 156 GHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLF 235 (536)
Q Consensus 156 ~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 235 (536)
.+...+.++...+++. |+.++.+ |..+|. +++.+..+.............+..++.++.++.+..+|.. +.
T Consensus 57 ~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~---- 127 (330)
T 3hxj_A 57 SGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GT---- 127 (330)
T ss_dssp GGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEETTEEEEECTTSEEEEECTT-SC----
T ss_pred cCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEECCEEEEEecCCEEEEEcCC-CC----
Confidence 3445567777766665 4455555 888886 6665554433222111111226778889999999999976 42
Q ss_pred cccCcccccceEEeeCCccCEEEEEEe-CCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecCCEEEEecCC
Q 009373 236 DISGSEKQNTQFRLWEHEGPITSLALD-LTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHDTTVASTSGS 311 (536)
Q Consensus 236 ~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~~~l~~~~d~ 311 (536)
.......+...+.++..+ .+.++.++.++.|..+|.. ++....+. ....+.++. .++.+++++ +
T Consensus 128 ---------~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~ 195 (330)
T 3hxj_A 128 ---------EKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--D 195 (330)
T ss_dssp ---------EEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--S
T ss_pred ---------EEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--C
Confidence 122222233344555564 5668888889999999998 77766665 333344443 456655555 8
Q ss_pred cEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEc-C
Q 009373 312 DVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFE-F 390 (536)
Q Consensus 312 ~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~ 390 (536)
.+..+| .+++....+.. ....+.++...++|. |..++.++.+..+|. ++ ..+..+......+.++..+ .
T Consensus 196 ~l~~~d-~~g~~~~~~~~-~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g------~~~~~~~~~~~~~~~~~~~~~ 265 (330)
T 3hxj_A 196 KVYAIN-PDGTEKWNFYA-GYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DG------TEKWRFKTGKRIESSPVIGNT 265 (330)
T ss_dssp SEEEEC-TTSCEEEEECC-SSCCCSCCEECTTSC-EEEEETTTEEEEECT-TS------CEEEEEECSSCCCSCCEECTT
T ss_pred EEEEEC-CCCcEEEEEcc-CCcceeceEECCCCe-EEEEcCCCeEEEECC-CC------CEeEEeeCCCCccccceEcCC
Confidence 999999 77777766642 445677888888776 555667788888874 33 2223333333334455666 5
Q ss_pred CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEe-cCCEEEEecCCCeEEEEeCCch
Q 009373 391 PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDI-GADRIVCGGEEGIVRIWNFSQA 469 (536)
Q Consensus 391 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~sg~~Dg~i~vW~~~~~ 469 (536)
..|..++.+|.|..+|. ++..... .......+.++.. .+..|..|+.+|.+++...+..
T Consensus 266 g~l~v~t~~ggl~~~d~-~g~~~~~-------------------~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 266 DTIYFGSYDGHLYAINP-DGTEKWN-------------------FETGSWIIATPVIDENGTIYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp SCEEEECTTCEEEEECT-TSCEEEE-------------------EECSSCCCSCCEECTTCCEEEECTTSCEEEEEC---
T ss_pred CeEEEecCCCCEEEECC-CCcEEEE-------------------EEcCCccccceEEcCCCEEEEEcCCCeEEEEecccc
Confidence 78889999999999985 3321111 0001122233334 2336777899999999877643
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.99 E-value=2.3e-07 Score=86.82 Aligned_cols=228 Identities=14% Similarity=0.109 Sum_probs=138.3
Q ss_pred cceeeeeCccccEEEEEEecCCC-EEEEEeCCCcEEEEECCCCceeeee--CCCCceEEEEecCCCEEEEEeCCCcEEEE
Q 009373 149 YSIDVLYGHTEAVLTVFVLASAK-LLFTSGYDSIVRMWHLEDGFSIASS--KPLGCTIRAVAADKKLLVAGGTDGFIHCW 225 (536)
Q Consensus 149 ~~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~dg~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~l~sg~~dg~i~vw 225 (536)
..+..+..+........|+|+++ +++++..++.|..|+. +++. ..+ ......-.++.++|+++++...++.|.+|
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRS 112 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEE
Confidence 35666777777788999999998 6778888899999998 4442 223 22223344556888876666666889999
Q ss_pred EcccCccceecccCcccccceEEeeC-CccCEEEEEE--eCCEEEE----Eec-------------CCeEEEEeCCCceE
Q 009373 226 RAVEVLPHLFDISGSEKQNTQFRLWE-HEGPITSLAL--DLTRIYS----GSW-------------DMTVRVWDRALLKC 285 (536)
Q Consensus 226 d~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~--~~~~l~s----~s~-------------dg~i~iwd~~~~~~ 285 (536)
+.. +....+ .....+ ....+.++++ ++...++ |.. .+.|..+|..+++.
T Consensus 113 ~~~-g~~~~~----------~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~ 181 (305)
T 3dr2_A 113 DAD-GQAHLL----------VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL 181 (305)
T ss_dssp CTT-SCEEEE----------ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC
T ss_pred CCC-CCEEEE----------EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE
Confidence 875 321100 000011 1123556777 5566665 332 25688888766655
Q ss_pred eEeeeccccEE--EEeecCCEEEEec-C------CcEEEEeCCCCcEE--EEEccccccceEEEEEeCCCCEEEEEcCCC
Q 009373 286 LKVLRHSDWVY--GLAPHDTTVASTS-G------SDVYIWDTNSGCLL--TVVNGAHVGNTKSLARSHTGDFLFTGGEDG 354 (536)
Q Consensus 286 ~~~~~~~~~v~--~~~~~~~~l~~~~-d------~~i~i~d~~~~~~~--~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg 354 (536)
.... ...... +++++++.++.+. . +.|.+||+..+... ..+.....+.+..++++++|++ .+++.+|
T Consensus 182 ~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~l-wv~~~~g 259 (305)
T 3dr2_A 182 QRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWL-WSSSGTG 259 (305)
T ss_dssp EEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCE-EECCSSE
T ss_pred EEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCE-EEecCCc
Confidence 4333 223333 4458888666654 4 67999998765411 1121112344567889999994 4444454
Q ss_pred cEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCC
Q 009373 355 AIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDG 400 (536)
Q Consensus 355 ~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg 400 (536)
|.+|+.... .+..+..+. .+.+++|++ +.|+.++.++
T Consensus 260 -v~~~~~~g~-------~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 260 -VCVFDSDGQ-------LLGHIPTPG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp -EEEECTTSC-------EEEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred -EEEECCCCC-------EEEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence 999997432 333443333 578899964 5787777764
No 224
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.97 E-value=4e-07 Score=92.74 Aligned_cols=185 Identities=12% Similarity=0.053 Sum_probs=116.4
Q ss_pred CCEEEEEeC-CCcEEEEEC-CCCceeeeeCCCCce-----------EEEEecCCCEEEEEeCCCcEEEEEcccCccceec
Q 009373 170 AKLLFTSGY-DSIVRMWHL-EDGFSIASSKPLGCT-----------IRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFD 236 (536)
Q Consensus 170 ~~~l~sgs~-dg~v~iwd~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 236 (536)
+..++.++. ++.|.-+|. .+|+.+..+...... .......+..+++++.|+.+..+|..+++..-.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~- 140 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWE- 140 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEE-
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEEE-
Confidence 556666777 899999999 999998876543210 011223567888999999999999988863211
Q ss_pred ccCcccccceEEeeCCc--cCEE-EEEEeCCEEEEEec------CCeEEEEeCCCceEeEeeecccc-------------
Q 009373 237 ISGSEKQNTQFRLWEHE--GPIT-SLALDLTRIYSGSW------DMTVRVWDRALLKCLKVLRHSDW------------- 294 (536)
Q Consensus 237 ~~~~~~~~~~~~~~~h~--~~v~-~l~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~------------- 294 (536)
.....+. ..+. +-...++.++.++. ++.|..+|..+++.+..+.....
T Consensus 141 ----------~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~ 210 (571)
T 2ad6_A 141 ----------VEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSA 210 (571)
T ss_dssp ----------EECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTT
T ss_pred ----------ecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccc
Confidence 0111110 0111 11123566666665 79999999999999887762211
Q ss_pred ----------------------------EEEEeecCCEEEEec-C----------------CcEEEEeCCCCcEEEEEcc
Q 009373 295 ----------------------------VYGLAPHDTTVASTS-G----------------SDVYIWDTNSGCLLTVVNG 329 (536)
Q Consensus 295 ----------------------------v~~~~~~~~~l~~~~-d----------------~~i~i~d~~~~~~~~~~~~ 329 (536)
..++.+....++.+. + +.|..+|..+|+.+-.+..
T Consensus 211 ~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~ 290 (571)
T 2ad6_A 211 NPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQK 290 (571)
T ss_dssp CGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEES
T ss_pred cccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecC
Confidence 123344445555444 2 2599999999999887753
Q ss_pred cc-c-------cceEEEEEeCCCC---EEEEEcCCCcEEEEEcccCc
Q 009373 330 AH-V-------GNTKSLARSHTGD---FLFTGGEDGAIHMYEIINDC 365 (536)
Q Consensus 330 ~~-~-------~~i~~l~~~~~~~---~l~tg~~dg~i~iwd~~~~~ 365 (536)
.+ . ....-+...++|+ .++.++.+|.++++|..+++
T Consensus 291 ~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 337 (571)
T 2ad6_A 291 TPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGN 337 (571)
T ss_dssp STTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCC
T ss_pred CCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCC
Confidence 22 1 1111222334674 67788999999999998874
No 225
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.94 E-value=1.2e-08 Score=96.69 Aligned_cols=255 Identities=12% Similarity=0.030 Sum_probs=154.1
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecC-CCEEEEEeCCCcEEEEEcccCccceecccCcccc
Q 009373 165 FVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAAD-KKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQ 243 (536)
Q Consensus 165 ~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~ 243 (536)
....++ .++.++.++.|..|| .+++.+.........+.++..+ +..++.++.+ +..+|. ++.. ..
T Consensus 26 ~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~-~~-------- 91 (330)
T 3hxj_A 26 ILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFGSDK--VYAINP-DGTE-KW-------- 91 (330)
T ss_dssp EECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCSSCE--EEEECC-CGGG-GG--------
T ss_pred eEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEecCc--EEEECC-CCcE-EE--------
Confidence 344444 466677889999999 8888776655444444555433 4566666665 888875 3321 10
Q ss_pred cceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecCCEEEEecCCcEEEEeCCC
Q 009373 244 NTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHDTTVASTSGSDVYIWDTNS 320 (536)
Q Consensus 244 ~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~~~l~~~~d~~i~i~d~~~ 320 (536)
.+...........+.++.++.++.++.|..+|.. ++...... ....+.++. .++.+++++.++.+..+|..
T Consensus 92 ----~~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~- 165 (330)
T 3hxj_A 92 ----RFDTKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD- 165 (330)
T ss_dssp ----GSCC-----CCEEEETTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-
T ss_pred ----EEECCCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-
Confidence 0111111122223347788889999999999998 77666655 222333333 46666665557999999999
Q ss_pred CcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCC-eEEEEeCC
Q 009373 321 GCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFP-WLVSAAGD 399 (536)
Q Consensus 321 ~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~l~s~s~d 399 (536)
++....+.. ....+.++...+++.+ ..++ +.|..+| .++ ............+.++..+++ .|..++.+
T Consensus 166 g~~~~~~~~-~~~~~~~~~~d~~g~l-~v~t--~~l~~~d-~~g------~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ 234 (330)
T 3hxj_A 166 GTEKWRFKT-NDAITSAASIGKDGTI-YFGS--DKVYAIN-PDG------TEKWNFYAGYWTVTRPAISEDGTIYVTSLD 234 (330)
T ss_dssp SCEEEEEEC-SSCCCSCCEECTTCCE-EEES--SSEEEEC-TTS------CEEEEECCSSCCCSCCEECTTSCEEEEETT
T ss_pred CCEeEEEec-CCCceeeeEEcCCCEE-EEEe--CEEEEEC-CCC------cEEEEEccCCcceeceEECCCCeEEEEcCC
Confidence 877766642 3445667777777774 4455 7799999 555 233334444566788888764 88889888
Q ss_pred CcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEec-CCEEEEecCCCeEEEEeCCchhh
Q 009373 400 GKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIG-ADRIVCGGEEGIVRIWNFSQAFE 471 (536)
Q Consensus 400 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~sg~~Dg~i~vW~~~~~~~ 471 (536)
+.|..+|... ...+.. .. ......++..+ +..|..++.+|.|..+|. +++.
T Consensus 235 ~gl~~~~~~g-~~~~~~------------~~-------~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~ 286 (330)
T 3hxj_A 235 GHLYAINPDG-TEKWRF------------KT-------GKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTE 286 (330)
T ss_dssp TEEEEECTTS-CEEEEE------------EC-------SSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCE
T ss_pred CeEEEECCCC-CEeEEe------------eC-------CCCccccceEcCCCeEEEecCCCCEEEECC-CCcE
Confidence 8899887432 111110 00 00001112223 346777888888999985 4443
No 226
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.93 E-value=1.4e-06 Score=81.10 Aligned_cols=185 Identities=10% Similarity=0.051 Sum_probs=115.8
Q ss_pred EEecC-CCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCC
Q 009373 205 AVAAD-KKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRA 281 (536)
Q Consensus 205 ~~~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~ 281 (536)
.+.++ +.++++...++.|..||..++.. . .......+.++++ +++ ++.+. ++.|.+||..
T Consensus 19 ~w~~~~~~l~~~d~~~~~i~~~d~~~~~~--------------~-~~~~~~~~~~i~~~~dG~-l~v~~-~~~l~~~d~~ 81 (297)
T 3g4e_A 19 VWEEVSNSLLFVDIPAKKVCRWDSFTKQV--------------Q-RVTMDAPVSSVALRQSGG-YVATI-GTKFCALNWK 81 (297)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCCE--------------E-EEECSSCEEEEEEBTTSS-EEEEE-TTEEEEEETT
T ss_pred eEECCCCEEEEEECCCCEEEEEECCCCcE--------------E-EEeCCCceEEEEECCCCC-EEEEE-CCeEEEEECC
Confidence 34554 45667777789999999876531 1 1223467889998 555 44454 6789999998
Q ss_pred CceEeEeeec-----cccEEEEe--ecCCEEEEec-C-----------CcEEEEeCCCCcEEEEEccccccceEEEEEeC
Q 009373 282 LLKCLKVLRH-----SDWVYGLA--PHDTTVASTS-G-----------SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSH 342 (536)
Q Consensus 282 ~~~~~~~~~~-----~~~v~~~~--~~~~~l~~~~-d-----------~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~ 342 (536)
+++....... ...+..+. ++|+++++.. . +.|..+|.. ++..... ......+.++|+|
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~--~~~~~pngi~~sp 158 (297)
T 3g4e_A 82 EQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYF--DQVDISNGLDWSL 158 (297)
T ss_dssp TTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEE--EEESBEEEEEECT
T ss_pred CCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEe--eccccccceEEcC
Confidence 8775443331 12355554 7888777653 1 234444543 3333222 2445678999999
Q ss_pred CCCEE-EEEcCCCcEEEEEcc--cCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCcc
Q 009373 343 TGDFL-FTGGEDGAIHMYEII--NDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 343 ~~~~l-~tg~~dg~i~iwd~~--~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~ 410 (536)
+++.| ++.+.++.|.+|++. ++.. .....+..+..+.+.+..+++++ .+.++...++.|.+||..++
T Consensus 159 dg~~lyv~~~~~~~i~~~~~d~~~G~~-~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFDYDLQTGQI-SNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEEECTTTCCE-EEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred CCCEEEEecCCCCcEEEEeccCCCCcc-cCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 99866 556667899999974 3321 11122333444456778999975 45555566788999998763
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.93 E-value=1.7e-10 Score=111.40 Aligned_cols=184 Identities=11% Similarity=0.062 Sum_probs=102.2
Q ss_pred EeCCEEEEEecCCeEEEEeCCCceEeEeeeccccEEEE--eecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEE
Q 009373 261 LDLTRIYSGSWDMTVRVWDRALLKCLKVLRHSDWVYGL--APHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKS 337 (536)
Q Consensus 261 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~ 337 (536)
.+++.+++++.||.|+.||..+++.+..+.. ..+.+. ..++..+++++ |+.|+.||..+|+.+..+.......+.+
T Consensus 7 v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 7 LPETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp -CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eeCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 4688999999999999999999999988775 444332 25666777655 8999999999998776654211111111
Q ss_pred -EEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccCCC
Q 009373 338 -LARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRKLLRSGRP 416 (536)
Q Consensus 338 -l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~ 416 (536)
..+. .+..+++|+.|+.|+.||..+++ .+..+..+.. +. ..-.+..+++++.|+.|+.||.+++...+..
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~------~~w~~~~~~~-~~-~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGE------KQQTLSSAFA-DS-LSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCc------EEEEecCCCc-cc-ccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 1111 34567888889999999999883 3433333321 11 1114578999999999999999987544432
Q ss_pred CCCCceeeEEeeCCCeeeeccccccEEEEEec---CCEEEEecCCCeEEEEeCCchhhHH
Q 009373 417 TSGKRVSRVIEVEPPQRMLHGFECNLLSVDIG---ADRIVCGGEEGIVRIWNFSQAFEIE 473 (536)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~sg~~Dg~i~vW~~~~~~~~~ 473 (536)
.. ...... .+..+ ...++.++.||.|+.||..+|+.+.
T Consensus 157 ~~-----------------~~~~~~--~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W 197 (369)
T 2hz6_A 157 TY-----------------FDYAAS--LPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLW 197 (369)
T ss_dssp EE-----------------EEECCB--CCCCCTTCCCCEEEEETSCEEEEECTTTCCEEE
T ss_pred ec-----------------ccccCc--cccCCccccceEEEECCCCEEEEEECCCCcEEE
Confidence 10 000000 11111 1456778889999999998887654
No 228
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.92 E-value=4.6e-10 Score=99.59 Aligned_cols=49 Identities=24% Similarity=0.381 Sum_probs=46.0
Q ss_pred cccCCcHHHHHHHhcCCChhhHHHHhhhhHHHHHHhcCChhhHHHHHhH
Q 009373 63 TITDLPPALISEILNCLDPKELGIVSCVSPILHRLASDHHAWKEFYCER 111 (536)
Q Consensus 63 ~l~~Lp~ei~~~I~~~L~~~~l~~~~~v~~~~~~l~~~~~lW~~~~~~~ 111 (536)
+|..||.|++++||+||+|+||+++++|||.||.++.|+.||+.++.+.
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd 52 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRD 52 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSS
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhcc
Confidence 5789999999999999999999999999999999999999999977653
No 229
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.92 E-value=1e-09 Score=99.05 Aligned_cols=81 Identities=17% Similarity=0.271 Sum_probs=62.7
Q ss_pred cccCCcHHHHHHHhcCCChhhHH-HHhhhhHHHHHHhcCChhhHHHHHhHhCCCCCCCCCCCCCCCCCCchhhhhhhhhh
Q 009373 63 TITDLPPALISEILNCLDPKELG-IVSCVSPILHRLASDHHAWKEFYCERWGLPIASAPLGAGFSDDKSWKELFVEREFR 141 (536)
Q Consensus 63 ~l~~Lp~ei~~~I~~~L~~~~l~-~~~~v~~~~~~l~~~~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~Wk~~~~~~~~~ 141 (536)
.+..||+|++.+||++|++++|+ +|++|||+|+.|++++.+|+..+... ++..... .......||..|..+.+.
T Consensus 50 ~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~-g~~~~~~----~~~~~~~Wk~~y~~~~~g 124 (297)
T 2e31_A 50 YLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE-GLVPEGS----ADEERDHWQQFYFLSKRR 124 (297)
T ss_dssp CTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT-TCCCC---------CCSCHHHHHHHHHHC
T ss_pred ChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc-Ccccccc----cCCCCCChhhhheheecc
Confidence 47899999999999999999999 99999999999999999999965554 3321111 112355699999988776
Q ss_pred ccccCCc
Q 009373 142 SKTFLGR 148 (536)
Q Consensus 142 ~~~~~~~ 148 (536)
.+.+.+.
T Consensus 125 RNLL~NP 131 (297)
T 2e31_A 125 RNLLRNP 131 (297)
T ss_dssp CCCSSCS
T ss_pred cceeecC
Confidence 6666544
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.92 E-value=1.3e-06 Score=78.67 Aligned_cols=192 Identities=13% Similarity=-0.015 Sum_probs=132.3
Q ss_pred cEEEEEEecCCCEEEEEeC--CCcEEEEECCCCceeeeeCCCC-ceEEEEecCCCEEEEE-eCCCcEEEEEcccCcccee
Q 009373 160 AVLTVFVLASAKLLFTSGY--DSIVRMWHLEDGFSIASSKPLG-CTIRAVAADKKLLVAG-GTDGFIHCWRAVEVLPHLF 235 (536)
Q Consensus 160 ~V~~v~~~~~~~~l~sgs~--dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~l~sg-~~dg~i~vwd~~~~~~~~~ 235 (536)
....+.|++++.++++.+. ++.|+++|+.+++.+..+.... .....+..+++.|+.+ -.++.+.++|..+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~---- 97 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLS---- 97 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTE----
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCc----
Confidence 3578999998765555543 6899999999999988764222 1223455456555554 457899999987653
Q ss_pred cccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEeeecc---c---cEEEEe-ecCCEEEEe
Q 009373 236 DISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVLRHS---D---WVYGLA-PHDTTVAST 308 (536)
Q Consensus 236 ~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---~---~v~~~~-~~~~~l~~~ 308 (536)
...++.-....-..++.+++.++.+..++.|.++|..+.+....+.-. . .++.+. .++..++..
T Consensus 98 ---------v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~ 168 (266)
T 2iwa_A 98 ---------NIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANI 168 (266)
T ss_dssp ---------EEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred ---------EEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEec
Confidence 222232111222457778888877778899999999999888887621 1 244554 355444444
Q ss_pred c-CCcEEEEeCCCCcEEEEEccc-c-----------ccceEEEEEeCCCC-EEEEEcCCCcEEEEEcccC
Q 009373 309 S-GSDVYIWDTNSGCLLTVVNGA-H-----------VGNTKSLARSHTGD-FLFTGGEDGAIHMYEIIND 364 (536)
Q Consensus 309 ~-d~~i~i~d~~~~~~~~~~~~~-~-----------~~~i~~l~~~~~~~-~l~tg~~dg~i~iwd~~~~ 364 (536)
. ++.|.+.|+.+++.+..+..+ . ....+.++++|+++ +++++...+.+.+.++...
T Consensus 169 ~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 169 WQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 4 689999999999999888632 1 13568999999986 5566667888999988765
No 231
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.91 E-value=2.5e-07 Score=96.26 Aligned_cols=189 Identities=14% Similarity=0.030 Sum_probs=120.9
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeeeeCCCCce-----------EEEEecCCCEEEEEeCCCcEEEEEcccCccceeccc
Q 009373 170 AKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCT-----------IRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDIS 238 (536)
Q Consensus 170 ~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~-----------v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 238 (536)
+..|+.++.++.|.-+|..+|+.+..+...... .......+..+++++.|+.|..+|..+++..- ...
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W-~~~ 144 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIW-SQQ 144 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEE-EEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEee-eec
Confidence 567777888999999999999998887543210 01122346788899999999999999886321 110
Q ss_pred CcccccceEEeeCCccCEEEEEEeCCEEEEEec------CCeEEEEeCCCceEeEeeecc--cc----------------
Q 009373 239 GSEKQNTQFRLWEHEGPITSLALDLTRIYSGSW------DMTVRVWDRALLKCLKVLRHS--DW---------------- 294 (536)
Q Consensus 239 ~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~--~~---------------- 294 (536)
..... . .......+ ...++.++.+.. +|.|..+|..+++.+..+... .+
T Consensus 145 ~~~~~-~--~~~~~~~P----~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 217 (668)
T 1kv9_A 145 TTDPA-K--PYSITGAP----RVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTW 217 (668)
T ss_dssp CSCTT-S--SCBCCSCC----EEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTC
T ss_pred cCCCC-C--cceecCCC----EEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccC
Confidence 00000 0 00001112 123556666543 589999999999998877521 00
Q ss_pred ----------------EEEEeecCCEEEEec-CC-------------------cEEEEeCCCCcEEEEEccc-cc-----
Q 009373 295 ----------------VYGLAPHDTTVASTS-GS-------------------DVYIWDTNSGCLLTVVNGA-HV----- 332 (536)
Q Consensus 295 ----------------v~~~~~~~~~l~~~~-d~-------------------~i~i~d~~~~~~~~~~~~~-~~----- 332 (536)
..++.+....++.+. ++ .|..+|..+|+.+..+... |.
T Consensus 218 ~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~ 297 (668)
T 1kv9_A 218 QGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT 297 (668)
T ss_dssp CSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC
T ss_pred CccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc
Confidence 123445666776665 44 3999999999998887643 22
Q ss_pred --cceEEEEEeCCCC---EEEEEcCCCcEEEEEcccCcc
Q 009373 333 --GNTKSLARSHTGD---FLFTGGEDGAIHMYEIINDCT 366 (536)
Q Consensus 333 --~~i~~l~~~~~~~---~l~tg~~dg~i~iwd~~~~~~ 366 (536)
.+.....+..+|+ .++.++.+|.++++|..+++.
T Consensus 298 ~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 298 ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 2233333334665 688999999999999988853
No 232
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.88 E-value=2.6e-07 Score=89.60 Aligned_cols=237 Identities=10% Similarity=-0.010 Sum_probs=152.1
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEe----------CCCcEEEEECCCCceeeeeCC---------CCceEEEEecCCC
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSG----------YDSIVRMWHLEDGFSIASSKP---------LGCTIRAVAADKK 211 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs----------~dg~v~iwd~~~~~~~~~~~~---------~~~~v~~~~~~~~ 211 (536)
+.++..-..+ .++++||+++|+.+. .++.|.++|..+++.+.++.- ....-..+++|++
T Consensus 112 v~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk 189 (426)
T 3c75_H 112 LGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNK 189 (426)
T ss_dssp EEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSS
T ss_pred EEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCC
Confidence 3444433344 799999999888776 467999999999998877632 1223457889999
Q ss_pred EEEEEeC--CCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE-eCCEEEEEecCCeEEEEeCCCceEeEe
Q 009373 212 LLVAGGT--DGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL-DLTRIYSGSWDMTVRVWDRALLKCLKV 288 (536)
Q Consensus 212 ~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~ 288 (536)
+++++.. ++.|.+.|+.+.+ ....+.-. + ...+.. ....+++.+.||.+.+.+..+++....
T Consensus 190 ~lyV~n~~~~~~VsVID~~t~k-------------vv~~I~v~-g-~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~ 254 (426)
T 3c75_H 190 NLLFYQFSPAPAVGVVDLEGKT-------------FDRMLDVP-D-CYHIFPASPTVFYMNCRDGSLARVDFADGETKVT 254 (426)
T ss_dssp EEEEEECSSSCEEEEEETTTTE-------------EEEEEECC-S-EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEE
T ss_pred EEEEEecCCCCeEEEEECCCCe-------------EEEEEEcC-C-ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEE
Confidence 9999874 5889999997753 22222211 1 112222 346677788899988888866655432
Q ss_pred ----ee-ccccE---EEEeecCCEEEEec-CCcEEEEeCCCCcEEE--EEcc---------ccccceEEEEEeCCCCEEE
Q 009373 289 ----LR-HSDWV---YGLAPHDTTVASTS-GSDVYIWDTNSGCLLT--VVNG---------AHVGNTKSLARSHTGDFLF 348 (536)
Q Consensus 289 ----~~-~~~~v---~~~~~~~~~l~~~~-d~~i~i~d~~~~~~~~--~~~~---------~~~~~i~~l~~~~~~~~l~ 348 (536)
+. ...++ ..+.+++..++..+ .+.+.+.|...+.... .+.. ........++++|+++.++
T Consensus 255 ~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rly 334 (426)
T 3c75_H 255 NTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIY 334 (426)
T ss_dssp ECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEE
T ss_pred eeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEE
Confidence 21 11111 13356666555444 7889999987654221 1100 0111222368999998777
Q ss_pred EEcC----------CCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--C-eEEEEe-CCCcEEEEECCccc
Q 009373 349 TGGE----------DGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--P-WLVSAA-GDGKLSLIDVRKLL 411 (536)
Q Consensus 349 tg~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~-~l~s~s-~dg~i~vwd~~~~~ 411 (536)
+... ++.|.++|..+. +.+.++.. .....+++|++ + +++++. .++.|.|+|+.+.+
T Consensus 335 Va~~~~~~gthk~~s~~VsVID~~T~------kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 335 LLVDQRDEWKHKAASRFVVVLNAETG------ERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTC------CEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred EEecccccccccCCCCEEEEEECCCC------eEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 6542 357999999988 44444432 22478899975 5 788887 58999999999853
No 233
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.87 E-value=3.2e-07 Score=89.57 Aligned_cols=185 Identities=11% Similarity=0.030 Sum_probs=114.6
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCC--eEEEE
Q 009373 203 IRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDM--TVRVW 278 (536)
Q Consensus 203 v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg--~i~iw 278 (536)
-+++.++++++++...++.|++||..++.. ...... ..... +++ +++.|+++..++ .|.++
T Consensus 135 ~la~d~~g~lyv~d~~~~~I~~id~~~g~~-------------~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~ 199 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRDDPRVRLISVDDNKV-------------TTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVY 199 (409)
T ss_dssp EEEECSTTEEEEEETTTTEEEEEETTTTEE-------------EEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEE
T ss_pred EEEEeCCCCEEEEecCCCcEEEEECCCCEE-------------EEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEE
Confidence 345568888777777789999999876531 111111 12222 666 667888888766 79999
Q ss_pred eCCCceEeEee----e-ccccEEEE--ee-cCCEEEEecCCcEEEEeCCCCcEEEEE---ccccccce-E-EEEEeCC-C
Q 009373 279 DRALLKCLKVL----R-HSDWVYGL--AP-HDTTVASTSGSDVYIWDTNSGCLLTVV---NGAHVGNT-K-SLARSHT-G 344 (536)
Q Consensus 279 d~~~~~~~~~~----~-~~~~v~~~--~~-~~~~l~~~~d~~i~i~d~~~~~~~~~~---~~~~~~~i-~-~l~~~~~-~ 344 (536)
+...+.....+ . ....+.++ .+ ++.++++..++.|+.||..++.....- ..++...- . .++|+|+ +
T Consensus 200 d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g 279 (409)
T 3hrp_A 200 MKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDS 279 (409)
T ss_dssp EGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTT
T ss_pred EcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCC
Confidence 88765543333 1 22333444 46 455555333788999999887643320 11222222 3 9999995 6
Q ss_pred CEEEEEcCCCcEEEEEcccCccccccceeeeccCC---------------CCCeEEEEEcC--CeEEEEe-CCCcEEEEE
Q 009373 345 DFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPH---------------TGPVNSLAFEF--PWLVSAA-GDGKLSLID 406 (536)
Q Consensus 345 ~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h---------------~~~v~~l~~~~--~~l~s~s-~dg~i~vwd 406 (536)
.++++...++.|+.|+.... +..+.++ -.....+++++ .++++-+ .++.|+.||
T Consensus 280 ~lyv~d~~~~~I~~~~~~g~--------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~ 351 (409)
T 3hrp_A 280 NFYMSDQNLSSVYKITPDGE--------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLD 351 (409)
T ss_dssp EEEEEETTTTEEEEECTTCC--------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEE
T ss_pred EEEEEeCCCCEEEEEecCCC--------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEE
Confidence 66667677889999987543 1111111 23578999986 5555555 688999999
Q ss_pred CCcc
Q 009373 407 VRKL 410 (536)
Q Consensus 407 ~~~~ 410 (536)
+.++
T Consensus 352 ~~~G 355 (409)
T 3hrp_A 352 ILDG 355 (409)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 7554
No 234
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.87 E-value=2.1e-06 Score=87.43 Aligned_cols=186 Identities=10% Similarity=0.021 Sum_probs=118.5
Q ss_pred CCEEEEEeC-CCcEEEEEC-CCCceeeeeCCCCce-------------EEEEecCCCE----EEEEeCCCcEEEEEcccC
Q 009373 170 AKLLFTSGY-DSIVRMWHL-EDGFSIASSKPLGCT-------------IRAVAADKKL----LVAGGTDGFIHCWRAVEV 230 (536)
Q Consensus 170 ~~~l~sgs~-dg~v~iwd~-~~~~~~~~~~~~~~~-------------v~~~~~~~~~----l~sg~~dg~i~vwd~~~~ 230 (536)
+..|+.++. ++.|.-+|. .+|+.+..+...... -.++.|.+.. ++.++.|+.+..+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 556777777 899999999 999998877543210 1133234555 888999999999999888
Q ss_pred ccceecccCcccccceEEeeCCc--cCEE-EEEEeCCEEEEEe------cCCeEEEEeCCCceEeEeeecccc-------
Q 009373 231 LPHLFDISGSEKQNTQFRLWEHE--GPIT-SLALDLTRIYSGS------WDMTVRVWDRALLKCLKVLRHSDW------- 294 (536)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~h~--~~v~-~l~~~~~~l~s~s------~dg~i~iwd~~~~~~~~~~~~~~~------- 294 (536)
+..-. . ....+. ..+. .-.+.++.++.++ .+|.|+.+|..+++.+..+.....
T Consensus 142 ~~~W~-~----------~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~ 210 (599)
T 1w6s_A 142 ETVWK-V----------ENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLA 210 (599)
T ss_dssp CEEEE-E----------ECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBC
T ss_pred CEEEe-e----------cCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccc
Confidence 63211 0 010100 0111 1112345666665 389999999999999887762211
Q ss_pred ----------------------------------EEEEeecCCEEEEec-C----------------CcEEEEeCCCCcE
Q 009373 295 ----------------------------------VYGLAPHDTTVASTS-G----------------SDVYIWDTNSGCL 323 (536)
Q Consensus 295 ----------------------------------v~~~~~~~~~l~~~~-d----------------~~i~i~d~~~~~~ 323 (536)
..++.+...+++.+. + +.|..+|..+|+.
T Consensus 211 p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~ 290 (599)
T 1w6s_A 211 SDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEA 290 (599)
T ss_dssp TTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCE
T ss_pred cccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCce
Confidence 123445556666655 4 3799999999999
Q ss_pred EEEEcccccc--------ceEEEEEe-CCC---CEEEEEcCCCcEEEEEcccCcc
Q 009373 324 LTVVNGAHVG--------NTKSLARS-HTG---DFLFTGGEDGAIHMYEIINDCT 366 (536)
Q Consensus 324 ~~~~~~~~~~--------~i~~l~~~-~~~---~~l~tg~~dg~i~iwd~~~~~~ 366 (536)
+-.+...+.. ...-+... .+| ..++.++.+|.++++|..+++.
T Consensus 291 ~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 291 KFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp EEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred eeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCE
Confidence 8877643321 11112222 467 5678899999999999988843
No 235
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.83 E-value=8.1e-07 Score=83.13 Aligned_cols=182 Identities=14% Similarity=0.109 Sum_probs=112.8
Q ss_pred EEEecCCC-EEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeC
Q 009373 204 RAVAADKK-LLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDR 280 (536)
Q Consensus 204 ~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~ 280 (536)
..+.++++ +++++..++.|..|+. ++. ...+..+...+..+++ +++.+++...++.|..||.
T Consensus 50 p~~~~~g~~l~~~d~~~~~i~~~~~-~g~--------------~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 50 PAWWEAQRTLVWSDLVGRRVLGWRE-DGT--------------VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEET-TSC--------------EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CeEeCCCCEEEEEECCCCEEEEEeC-CCC--------------EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 34567887 6777778899999986 331 2233345667888998 4554444445688999998
Q ss_pred CCceEeEeeec-----cccEEEE--eecCCEEEE----ec--------------CCcEEEEeCCCCcEEEEEccccccce
Q 009373 281 ALLKCLKVLRH-----SDWVYGL--APHDTTVAS----TS--------------GSDVYIWDTNSGCLLTVVNGAHVGNT 335 (536)
Q Consensus 281 ~~~~~~~~~~~-----~~~v~~~--~~~~~~l~~----~~--------------d~~i~i~d~~~~~~~~~~~~~~~~~i 335 (536)
. ++....... ...+..+ .++|+++++ +. .+.|..+|..+++..... .....
T Consensus 115 ~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~~p 190 (305)
T 3dr2_A 115 D-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLDHP 190 (305)
T ss_dssp T-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EESSE
T ss_pred C-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCCCC
Confidence 6 553322221 1123333 488888886 22 245888888777654332 33456
Q ss_pred EEEEEeCCCCEEEEEcCC------CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC-CeEEEEeCCCcEEEEECC
Q 009373 336 KSLARSHTGDFLFTGGED------GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF-PWLVSAAGDGKLSLIDVR 408 (536)
Q Consensus 336 ~~l~~~~~~~~l~tg~~d------g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~ 408 (536)
+.++|+|+++.|+.+... +.|.+|++.... ......... ...+....+++++ ..|.+++.+| |.+|+..
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~--~~~~~pdgi~~d~~G~lwv~~~~g-v~~~~~~ 266 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFAS--VPDGLPDGFCVDRGGWLWSSSGTG-VCVFDSD 266 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEEC--CSSSCCCSEEECTTSCEEECCSSE-EEEECTT
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEE--CCCCCCCeEEECCCCCEEEecCCc-EEEECCC
Confidence 789999999977777665 789999987652 111111111 1234456778875 3466666554 9999874
No 236
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.82 E-value=1.2e-06 Score=77.76 Aligned_cols=177 Identities=13% Similarity=0.138 Sum_probs=122.4
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEE-eCCCcEEEEEcccCccceecccC
Q 009373 161 VLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAG-GTDGFIHCWRAVEVLPHLFDISG 239 (536)
Q Consensus 161 V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~~ 239 (536)
...+.|+ ++.++++.+.+|.|+++|+++++.+..+-+...-...+.++++.|+.. -.++.+.+||..+.+
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~-------- 127 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQ-------- 127 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTE--------
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCc--------
Confidence 4678887 467777888889999999999998877611111123355555555444 467899999987753
Q ss_pred cccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEeeec---cc---cEEEEe-ecCCEEEEec-CC
Q 009373 240 SEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVLRH---SD---WVYGLA-PHDTTVASTS-GS 311 (536)
Q Consensus 240 ~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~---~v~~~~-~~~~~l~~~~-d~ 311 (536)
.+.++.- ...-..++++++.|+.+..++.|.++|..+.+.+..+.- .. .++.+. .+|++++... ++
T Consensus 128 -----~~~ti~~-~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~ 201 (268)
T 3nok_A 128 -----RERTTRY-SGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSS 201 (268)
T ss_dssp -----EEEEEEC-SSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCS
T ss_pred -----EEEEEeC-CCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCC
Confidence 2223322 122256678898888888899999999999998888762 22 334455 4666555554 68
Q ss_pred cEEEEeCCCCcEEEEEccc------------cccceEEEEEeCCCCEEEEEcC
Q 009373 312 DVYIWDTNSGCLLTVVNGA------------HVGNTKSLARSHTGDFLFTGGE 352 (536)
Q Consensus 312 ~i~i~d~~~~~~~~~~~~~------------~~~~i~~l~~~~~~~~l~tg~~ 352 (536)
.|.+.|..+++.+..+..+ ...-.+.|+++|+++.|++.+.
T Consensus 202 ~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 202 DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 9999999999999888532 1135789999998765555443
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.79 E-value=2.8e-06 Score=75.39 Aligned_cols=183 Identities=13% Similarity=0.107 Sum_probs=126.4
Q ss_pred Ccccc--EEEEEEecCCCEEEEEeCCC--cEEEEECCCCceeeeeCCCCce-EEEEecCCCEEEEEe-CCCcEEEEEccc
Q 009373 156 GHTEA--VLTVFVLASAKLLFTSGYDS--IVRMWHLEDGFSIASSKPLGCT-IRAVAADKKLLVAGG-TDGFIHCWRAVE 229 (536)
Q Consensus 156 ~h~~~--V~~v~~~~~~~~l~sgs~dg--~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~l~sg~-~dg~i~vwd~~~ 229 (536)
.|... ...+.|+ ++.++.+++.+| .|+++|+++++.+..+...... -..+.++++.|+... .++.+.++|..+
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECcc
Confidence 45443 4788888 677777777766 8999999999998877543322 233555566666554 578999999877
Q ss_pred CccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEeeec---ccc---EEEEe-ecC
Q 009373 230 VLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVLRH---SDW---VYGLA-PHD 302 (536)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~---v~~~~-~~~ 302 (536)
.+ ...++.-. ..=..++++++.|+.+..++.|.++|..+.+....+.- ..+ ++.+. .+|
T Consensus 117 ~~-------------~~~ti~~~-~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G 182 (262)
T 3nol_A 117 LR-------------QVRSFNYD-GEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDG 182 (262)
T ss_dssp CC-------------EEEEEECS-SCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETT
T ss_pred Cc-------------EEEEEECC-CCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECC
Confidence 53 23333221 12246667888888777788999999999998888762 222 33344 456
Q ss_pred CEEEEec-CCcEEEEeCCCCcEEEEEccc-c----------ccceEEEEEeCCCCEEEEEcCC
Q 009373 303 TTVASTS-GSDVYIWDTNSGCLLTVVNGA-H----------VGNTKSLARSHTGDFLFTGGED 353 (536)
Q Consensus 303 ~~l~~~~-d~~i~i~d~~~~~~~~~~~~~-~----------~~~i~~l~~~~~~~~l~tg~~d 353 (536)
++++... ++.|.+.|..+++.+..+... - ....+.++++|+++.|++.+..
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 5555554 789999999999998888531 0 1356899999998877766654
No 238
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.79 E-value=1.7e-05 Score=74.74 Aligned_cols=183 Identities=11% Similarity=-0.032 Sum_probs=112.4
Q ss_pred EEecC-CCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE-eCCEEEEEecCCeEEEEeCCC
Q 009373 205 AVAAD-KKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL-DLTRIYSGSWDMTVRVWDRAL 282 (536)
Q Consensus 205 ~~~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~dg~i~iwd~~~ 282 (536)
.++++ +.+++++..++.|..||..++.. ..+ .....+.++++ ..+.++.++. ..|.+||..+
T Consensus 55 ~~~~~~~~l~~~d~~~~~i~~~d~~~~~~--------------~~~-~~~~~v~~i~~~~dg~l~v~~~-~gl~~~d~~~ 118 (326)
T 2ghs_A 55 TFDPASGTAWWFNILERELHELHLASGRK--------------TVH-ALPFMGSALAKISDSKQLIASD-DGLFLRDTAT 118 (326)
T ss_dssp EEETTTTEEEEEEGGGTEEEEEETTTTEE--------------EEE-ECSSCEEEEEEEETTEEEEEET-TEEEEEETTT
T ss_pred eEeCCCCEEEEEECCCCEEEEEECCCCcE--------------EEE-ECCCcceEEEEeCCCeEEEEEC-CCEEEEECCC
Confidence 45665 45666777789999999876521 111 12457888888 3334444554 4599999988
Q ss_pred ceEeEeeec-----cccEEEEe--ecCCEEEEecC-------CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEE
Q 009373 283 LKCLKVLRH-----SDWVYGLA--PHDTTVASTSG-------SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLF 348 (536)
Q Consensus 283 ~~~~~~~~~-----~~~v~~~~--~~~~~l~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~ 348 (536)
++....... ...+..+. ++|+++++..+ +.|..+| +++... +. ........++|+|+++.++
T Consensus 119 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~-~~~~~~~~i~~s~dg~~ly 194 (326)
T 2ghs_A 119 GVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LF-ADISIPNSICFSPDGTTGY 194 (326)
T ss_dssp CCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EE-EEESSEEEEEECTTSCEEE
T ss_pred CcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-ee-CCCcccCCeEEcCCCCEEE
Confidence 775433221 13455655 78887776542 4566666 454333 32 2344678999999998665
Q ss_pred -EEcCCCcEEEEEcc--cC-ccccccceeeeccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECC
Q 009373 349 -TGGEDGAIHMYEII--ND-CTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVR 408 (536)
Q Consensus 349 -tg~~dg~i~iwd~~--~~-~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~ 408 (536)
+.+.++.|.+||+. ++ .. .....+..+......+.++++++ .+.++...++.|.+||..
T Consensus 195 v~~~~~~~I~~~d~~~~~Gl~~-~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLDARTGLPT-GKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEETTTCEEEEEEBCTTTCCBS-SCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred EEECCCCEEEEEEcccccCCcc-cCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 44567899999986 33 21 11122333333445678888875 455555566889999873
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.79 E-value=2.8e-06 Score=76.37 Aligned_cols=187 Identities=15% Similarity=0.053 Sum_probs=128.7
Q ss_pred EEEecCCCEEEEEeC--CCcEEEEEcccCccceecccCcccccceEEee-CCccCEEEEEEeCCEEEEEe-cCCeEEEEe
Q 009373 204 RAVAADKKLLVAGGT--DGFIHCWRAVEVLPHLFDISGSEKQNTQFRLW-EHEGPITSLALDLTRIYSGS-WDMTVRVWD 279 (536)
Q Consensus 204 ~~~~~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~l~s~s-~dg~i~iwd 279 (536)
+.+++++.++++.+. ++.|.++|+.+++. ...+. +.......++++++.|+.+. .++.+.++|
T Consensus 26 l~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v-------------~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 26 LVYAENDTLFESTGLYGRSSVRQVALQTGKV-------------ENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp EEECSTTEEEEEECSTTTCEEEEEETTTCCE-------------EEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEE
T ss_pred EEEeCCCeEEEECCCCCCCEEEEEECCCCCE-------------EEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEE
Confidence 455666544444433 58999999988742 22221 11223345777777666555 578999999
Q ss_pred CCCceEeEeeecc-ccEEEEeecCCEEEEec-CCcEEEEeCCCCcEEEEEccccc----cceEEEEEeCCCCEEEEEcCC
Q 009373 280 RALLKCLKVLRHS-DWVYGLAPHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHV----GNTKSLARSHTGDFLFTGGED 353 (536)
Q Consensus 280 ~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~----~~i~~l~~~~~~~~l~tg~~d 353 (536)
..+.+.+.++... ..-..++++++.++.+. ++.|.++|..+.+.+..+.-+.. ..++.+.|. +|...+....+
T Consensus 93 ~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~ 171 (266)
T 2iwa_A 93 RRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQT 171 (266)
T ss_dssp TTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred CCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCC
Confidence 9999999988754 44466888877666665 78999999999998888763321 236788888 67666666678
Q ss_pred CcEEEEEcccCccccccceeeeccC-------------CCCCeEEEEEcC---CeEEEEeCCCcEEEEECCcc
Q 009373 354 GAIHMYEIINDCTEANVLLVATWIP-------------HTGPVNSLAFEF---PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 354 g~i~iwd~~~~~~~~~~~~~~~~~~-------------h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~ 410 (536)
+.|.+.|..++.. +..+.- .....+.|+|++ .+++++...+++.+.++...
T Consensus 172 ~~V~vID~~tg~V------~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 172 DCIARISAKDGTL------LGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp SEEEEEETTTCCE------EEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CeEEEEECCCCcE------EEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 8999999999843 222221 124668999986 36667777899999998764
No 240
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.78 E-value=2.7e-07 Score=87.94 Aligned_cols=223 Identities=9% Similarity=-0.056 Sum_probs=138.5
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEe----------CCCcEEEEECCCCceeeeeCC---------CCceEEEEecCCC
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSG----------YDSIVRMWHLEDGFSIASSKP---------LGCTIRAVAADKK 211 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs----------~dg~v~iwd~~~~~~~~~~~~---------~~~~v~~~~~~~~ 211 (536)
+.++..-..+ .+.++||+++++.+. .+++|.+||+.+++.+.++.. ....-..++|||+
T Consensus 59 ~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk 136 (368)
T 1mda_H 59 LGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSA 136 (368)
T ss_dssp EEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSS
T ss_pred EEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCC
Confidence 4445433345 799999999888886 378999999999999988742 2344578899999
Q ss_pred EEEEEeC--CCcEEE--EEcccCccceecccC----------------cccccceEEeeC------------------Cc
Q 009373 212 LLVAGGT--DGFIHC--WRAVEVLPHLFDISG----------------SEKQNTQFRLWE------------------HE 253 (536)
Q Consensus 212 ~l~sg~~--dg~i~v--wd~~~~~~~~~~~~~----------------~~~~~~~~~~~~------------------h~ 253 (536)
+++++.. +..+.+ +|..+ . ......+ .........+.. ..
T Consensus 137 ~lyVan~~~~~~v~V~~iD~~t-v-~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~ 214 (368)
T 1mda_H 137 CLLFFLFGSSAAAGLSVPGASD-D-QLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSS 214 (368)
T ss_dssp CEEEEECSSSCEEEEEETTTEE-E-EEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCS
T ss_pred EEEEEccCCCCeEEEEEEchhh-c-eEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCC
Confidence 9998875 467888 88865 1 1110000 000000000000 01
Q ss_pred cCEEEEEEeCCEEEEEecCCeEEEEeCCCce--EeEeee-------------ccccEEEEeecCCEEEEe-c-C------
Q 009373 254 GPITSLALDLTRIYSGSWDMTVRVWDRALLK--CLKVLR-------------HSDWVYGLAPHDTTVAST-S-G------ 310 (536)
Q Consensus 254 ~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~--~~~~~~-------------~~~~v~~~~~~~~~l~~~-~-d------ 310 (536)
.+. . ..+++.++..+. +.|.+.|..+.. .+..+. .......+.++++.++.+ . .
T Consensus 215 ~P~-~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~ 291 (368)
T 1mda_H 215 QAA-Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLA 291 (368)
T ss_dssp CCE-E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTS
T ss_pred Ccc-c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccc
Confidence 111 1 114445555555 888888886432 222221 111224677888777654 2 2
Q ss_pred --CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCC-EEEEEc-CCCcEEEEEcccCccccccceeeeccCCCCCeEEE
Q 009373 311 --SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGD-FLFTGG-EDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSL 386 (536)
Q Consensus 311 --~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~tg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l 386 (536)
+.+.++|+.+++.+..+.. ......++|+|+|+ ++++.. .++.|.++|+.+. +.+.++.... ....+
T Consensus 292 ~~~~~~ViD~~t~~vv~~i~v--g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~------kvv~~I~vg~-~P~~i 362 (368)
T 1mda_H 292 AAENTSSVTASVGQTSGPISN--GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD------QDQSSVELDK-GPESL 362 (368)
T ss_dssp CEEEEEEEESSSCCEEECCEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSC------EEEEECCCCS-CCCEE
T ss_pred cCCCEEEEECCCCeEEEEEEC--CCCcceEEECCCCCEEEEEccCCCCeEEEEECCCC------cEEEEEECCC-CCCEE
Confidence 3577999999999988863 33688999999997 566666 5999999999998 5566655433 23455
Q ss_pred EEc
Q 009373 387 AFE 389 (536)
Q Consensus 387 ~~~ 389 (536)
++.
T Consensus 363 ~~~ 365 (368)
T 1mda_H 363 SVQ 365 (368)
T ss_dssp ECC
T ss_pred Eee
Confidence 543
No 241
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.76 E-value=4.2e-06 Score=85.33 Aligned_cols=189 Identities=10% Similarity=-0.047 Sum_probs=112.2
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeeeeCCCCce---------EEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCc
Q 009373 170 AKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCT---------IRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGS 240 (536)
Q Consensus 170 ~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~---------v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 240 (536)
+..++.++.++.|.-+|..+|+.+..+...... .......+..++.++.|+.|..+|..+++..-......
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~ 147 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFAD 147 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCC
Confidence 445555665445999999999988776433211 01112346788889999999999999886321100000
Q ss_pred ccccceEEeeCCccCEEEEEEeC----C-EEEEEe------cCCeEEEEeCCCceEeEeeecccc---------------
Q 009373 241 EKQNTQFRLWEHEGPITSLALDL----T-RIYSGS------WDMTVRVWDRALLKCLKVLRHSDW--------------- 294 (536)
Q Consensus 241 ~~~~~~~~~~~h~~~v~~l~~~~----~-~l~s~s------~dg~i~iwd~~~~~~~~~~~~~~~--------------- 294 (536)
... .......++. .++ + .+++++ .++.|..+|..+++.+........
T Consensus 148 ~~~----~~~~~~sP~v---~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~ 220 (582)
T 1flg_A 148 HGA----GYTMTGAPTI---VKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGD 220 (582)
T ss_dssp GGG----TCBCCSCCEE---EECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSC
T ss_pred CCc----CcccccCCEE---eCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccc
Confidence 000 0000112221 222 2 566665 379999999999998876542110
Q ss_pred -----------------------------EEEEeecCCEEEEec---------------------C----CcEEEEeCCC
Q 009373 295 -----------------------------VYGLAPHDTTVASTS---------------------G----SDVYIWDTNS 320 (536)
Q Consensus 295 -----------------------------v~~~~~~~~~l~~~~---------------------d----~~i~i~d~~~ 320 (536)
..++.+...+++.+. | +.|..+|..+
T Consensus 221 ~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~T 300 (582)
T 1flg_A 221 VKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSS 300 (582)
T ss_dssp TTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTT
T ss_pred cccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCC
Confidence 012334445555433 1 5799999999
Q ss_pred CcEEEEEccc-ccc-------ceEEEEEe-CCCC---EEEEEcCCCcEEEEEcccCc
Q 009373 321 GCLLTVVNGA-HVG-------NTKSLARS-HTGD---FLFTGGEDGAIHMYEIINDC 365 (536)
Q Consensus 321 ~~~~~~~~~~-~~~-------~i~~l~~~-~~~~---~l~tg~~dg~i~iwd~~~~~ 365 (536)
|+.+-.+... |.. ...-+... .+|+ .++.++.+|.++++|..+++
T Consensus 301 G~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 357 (582)
T 1flg_A 301 GEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGK 357 (582)
T ss_dssp CCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCC
Confidence 9998887532 221 11112222 4674 78889999999999998874
No 242
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.75 E-value=8.9e-07 Score=84.35 Aligned_cols=227 Identities=8% Similarity=0.025 Sum_probs=130.0
Q ss_pred ccEEEEEEecCCCEEEEEeC--CCcEEEEECCCCceeeeeC-------CCCceEEEEe--cCCCEEEEEeC-----CCcE
Q 009373 159 EAVLTVFVLASAKLLFTSGY--DSIVRMWHLEDGFSIASSK-------PLGCTIRAVA--ADKKLLVAGGT-----DGFI 222 (536)
Q Consensus 159 ~~V~~v~~~~~~~~l~sgs~--dg~v~iwd~~~~~~~~~~~-------~~~~~v~~~~--~~~~~l~sg~~-----dg~i 222 (536)
..+..++++|+|+++++... ++.++||.+.+++. ..+. .+-..+..+. ++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 78899999999999988642 34356666555543 3221 1233455554 66665555433 5789
Q ss_pred EEEEcccCcc-ceecccCcccccceEEeeCCccCEEEEEEe--CCEE-EEEe---cCCeEEEEeCCCceEeEeee-cccc
Q 009373 223 HCWRAVEVLP-HLFDISGSEKQNTQFRLWEHEGPITSLALD--LTRI-YSGS---WDMTVRVWDRALLKCLKVLR-HSDW 294 (536)
Q Consensus 223 ~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l-~s~s---~dg~i~iwd~~~~~~~~~~~-~~~~ 294 (536)
.+||+.++.. ..+.+... ...+...+..++++ ++.+ ++.+ .++.|.+||+.+++....+. |...
T Consensus 96 ~~~d~~tg~~~~~~~~~~~--------~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~ 167 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPP--------ITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGI 167 (343)
T ss_dssp EEEETTTTEEEEEEECCTT--------TSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTT
T ss_pred EEEECCCCeEEEEEECChh--------hcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcc
Confidence 9999877641 11111000 01223456788885 3454 4444 67899999999887766553 1111
Q ss_pred E---EEEeecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCC-cEEEEEcccCcc--c
Q 009373 295 V---YGLAPHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDG-AIHMYEIINDCT--E 367 (536)
Q Consensus 295 v---~~~~~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg-~i~iwd~~~~~~--~ 367 (536)
. ..+.+++..+.... ++.+..|. ..+..++++|+|+.|+++..++ .+..++...... .
T Consensus 168 ~~~~~~~~~~g~~~~~~~~~g~~~~~~---------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~ 232 (343)
T 2qe8_A 168 APEDIDLVIDGVPVQIGQPDGTVIRPH---------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQL 232 (343)
T ss_dssp SCCSCCCEETTEECBEECTTSCEECCC---------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTC
T ss_pred cccccceeECCEEEEeccCCCceecee---------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCC
Confidence 0 22334555554444 55554432 2357899999999888887766 444444321100 0
Q ss_pred cccceee--eccCCCCCeEEEEEcC--CeEEEEeCCCcEEEEECCc
Q 009373 368 ANVLLVA--TWIPHTGPVNSLAFEF--PWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 368 ~~~~~~~--~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~ 409 (536)
....... ...++.+....+++++ .++++...++.|.+||..+
T Consensus 233 ~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~ 278 (343)
T 2qe8_A 233 TDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSAD 278 (343)
T ss_dssp CHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTT
T ss_pred ChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCC
Confidence 0000000 1113444567788875 5677777789999999843
No 243
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.67 E-value=9.2e-05 Score=79.05 Aligned_cols=241 Identities=8% Similarity=0.027 Sum_probs=149.0
Q ss_pred ccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCC-------CCceEEEEecC-CCEEEEEeCCCcEEEEEcc
Q 009373 157 HTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKP-------LGCTIRAVAAD-KKLLVAGGTDGFIHCWRAV 228 (536)
Q Consensus 157 h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~-------~~~~v~~~~~~-~~~l~sg~~dg~i~vwd~~ 228 (536)
+...|.++...+++.+.+ |+.++-+..||..+++....... ....|.++..+ ...|..|+.+ -|.+|+..
T Consensus 213 ~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~ 290 (795)
T 4a2l_A 213 GTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEG 290 (795)
T ss_dssp -CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETT
T ss_pred CCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCC
Confidence 346788888887776555 55444488999887654433221 13567777743 3456666666 58888876
Q ss_pred cCccceecccCcccccceEEeeCCccCEEEEEEe-CCEEEEEecCCeEEEEeCCCceEeEeee-------ccccEEEEe-
Q 009373 229 EVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD-LTRIYSGSWDMTVRVWDRALLKCLKVLR-------HSDWVYGLA- 299 (536)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------~~~~v~~~~- 299 (536)
++....+....... ..-....|.++..| .+.|..|+.++-|..|+..+........ ....|.++.
T Consensus 291 ~~~~~~~~~~~~~~------~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~ 364 (795)
T 4a2l_A 291 TDSFASYSSNPVEN------GSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVE 364 (795)
T ss_dssp TTEEEEECCCTTST------TSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEE
T ss_pred CCeEEEEecCCCCC------CCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEE
Confidence 54321111000000 00123579999884 4568888888889999876554322111 234688887
Q ss_pred -ecCCEEEEecCCcEEEEeCCCCcEEEEEcc-------ccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccc
Q 009373 300 -PHDTTVASTSGSDVYIWDTNSGCLLTVVNG-------AHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVL 371 (536)
Q Consensus 300 -~~~~~l~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~ 371 (536)
.++.+.+++.++.|..||..+++....... -....|.++...++|..|..|+.++-|..||..++.. .
T Consensus 365 d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~----~ 440 (795)
T 4a2l_A 365 DKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV----E 440 (795)
T ss_dssp CTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE----E
T ss_pred CCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE----E
Confidence 456666655577899999987764433211 1235789999988888567777777799999877621 1
Q ss_pred eeee--ccCCCCCeEEEEEcC-CeEEEEeCCCcEEEEECCcc
Q 009373 372 LVAT--WIPHTGPVNSLAFEF-PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 372 ~~~~--~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~ 410 (536)
.... -..+...|.++..++ ..|..|+.+ -|.+||..+.
T Consensus 441 ~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~-Gl~~~~~~~~ 481 (795)
T 4a2l_A 441 NFNQRNSQLVNENVYAILPDGEGNLWLGTLS-ALVRFNPEQR 481 (795)
T ss_dssp EECTTTSCCSCSCEEEEEECSSSCEEEEESS-CEEEEETTTT
T ss_pred EeecCCCCcCCCeeEEEEECCCCCEEEEecC-ceeEEeCCCC
Confidence 1110 002346789998875 567777764 5888997753
No 244
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.67 E-value=2e-06 Score=81.83 Aligned_cols=217 Identities=7% Similarity=-0.029 Sum_probs=126.8
Q ss_pred EEEEEeCCC----cEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEe----------CCCcEEEEEcccCccceecc
Q 009373 172 LLFTSGYDS----IVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGG----------TDGFIHCWRAVEVLPHLFDI 237 (536)
Q Consensus 172 ~l~sgs~dg----~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~----------~dg~i~vwd~~~~~~~~~~~ 237 (536)
.+++...++ +|.+.|..+++.+.++.....+-..++|+++.++++. .++.|.+||+.+++
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~------ 107 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL------ 107 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC------
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCCceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC------
Confidence 344444444 8889999999999988554445678889999998886 47889999998864
Q ss_pred cCcccccceEEeeCC-------ccCEEEEEE--eCCEEEEEec--CCeEEE--EeCCCceEeEeeeccccEEEEeecC--
Q 009373 238 SGSEKQNTQFRLWEH-------EGPITSLAL--DLTRIYSGSW--DMTVRV--WDRALLKCLKVLRHSDWVYGLAPHD-- 302 (536)
Q Consensus 238 ~~~~~~~~~~~~~~h-------~~~v~~l~~--~~~~l~s~s~--dg~i~i--wd~~~~~~~~~~~~~~~v~~~~~~~-- 302 (536)
....+.-+ ......+++ ++++++++.. +..|.+ +|..+ +..+...+. ..+.+++
T Consensus 108 -------vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~-~~~~p~g~~ 176 (368)
T 1mda_H 108 -------PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC-FHIHPGAAA 176 (368)
T ss_dssp -------EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC-CCCEEEETT
T ss_pred -------EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc-eEEccCCCe
Confidence 22222111 011234455 6777777764 356777 88765 222221110 0011111
Q ss_pred -----------------------------------------------CEEEEecCCcEEEEeCCCCc--EEEEEccc---
Q 009373 303 -----------------------------------------------TTVASTSGSDVYIWDTNSGC--LLTVVNGA--- 330 (536)
Q Consensus 303 -----------------------------------------------~~l~~~~d~~i~i~d~~~~~--~~~~~~~~--- 330 (536)
.++++.. +.+.+.|+.++. .+..+...
T Consensus 177 ~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~ 255 (368)
T 1mda_H 177 THYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESG 255 (368)
T ss_dssp EEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTH
T ss_pred EEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccc
Confidence 1122222 445555554321 11111100
Q ss_pred ------cccceEEEEEeCCCCEEEEEcC---------CCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--C-e
Q 009373 331 ------HVGNTKSLARSHTGDFLFTGGE---------DGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--P-W 392 (536)
Q Consensus 331 ------~~~~i~~l~~~~~~~~l~tg~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~-~ 392 (536)
.......++++|+++.++++.. ++.+.++|+.+. +.+..+.... ...+++|++ . .
T Consensus 256 ~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~------~vv~~i~vg~-~p~gi~~s~Dg~~l 328 (368)
T 1mda_H 256 RKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG------QTSGPISNGH-DSDAIIAAQDGASD 328 (368)
T ss_dssp HHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC------CEEECCEEEE-EECEEEECCSSSCE
T ss_pred ccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC------eEEEEEECCC-CcceEEECCCCCEE
Confidence 0111122679999998876543 235669999988 4455444322 578899976 3 5
Q ss_pred EEEEe-CCCcEEEEECCccccc
Q 009373 393 LVSAA-GDGKLSLIDVRKLLRS 413 (536)
Q Consensus 393 l~s~s-~dg~i~vwd~~~~~~~ 413 (536)
+++.. .++.|.++|+.+.+..
T Consensus 329 ~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 329 NYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp EEEEETTTTEEEEEESSSCEEE
T ss_pred EEEccCCCCeEEEEECCCCcEE
Confidence 66666 5999999999986444
No 245
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.66 E-value=1.9e-05 Score=69.45 Aligned_cols=183 Identities=18% Similarity=0.135 Sum_probs=124.2
Q ss_pred Cccc--cEEEEEEecCCCEEEEEeCC--CcEEEEECCCCceeeeeCCCCc-eEEEEecCCCEEEE-EeCCCcEEEEEccc
Q 009373 156 GHTE--AVLTVFVLASAKLLFTSGYD--SIVRMWHLEDGFSIASSKPLGC-TIRAVAADKKLLVA-GGTDGFIHCWRAVE 229 (536)
Q Consensus 156 ~h~~--~V~~v~~~~~~~~l~sgs~d--g~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~l~s-g~~dg~i~vwd~~~ 229 (536)
.|.. -...+.|++ +.++.+.+.+ ..|+.+|+++++.+........ --..+.+.++.|+. .-.++.+.+||..+
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~t 94 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLAT 94 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCc
Confidence 5654 356888986 6666676665 4899999999999887743322 11234444554444 45689999999877
Q ss_pred CccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEeeec---c---ccEEEEe-ecC
Q 009373 230 VLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVLRH---S---DWVYGLA-PHD 302 (536)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~---~~v~~~~-~~~ 302 (536)
.+ ...++.-. ..=..++.+++.|+.+..++.|.++|..+.+.+..+.- . ..++.+. .++
T Consensus 95 l~-------------~~~ti~~~-~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G 160 (243)
T 3mbr_X 95 LT-------------PRARFRYP-GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNG 160 (243)
T ss_dssp TE-------------EEEEEECS-SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETT
T ss_pred Cc-------------EEEEEeCC-CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCC
Confidence 53 23333221 12246677888777777799999999999998888762 1 2344555 456
Q ss_pred CEEEEec-CCcEEEEeCCCCcEEEEEccc------------cccceEEEEEeCCCCEEEEEcCC
Q 009373 303 TTVASTS-GSDVYIWDTNSGCLLTVVNGA------------HVGNTKSLARSHTGDFLFTGGED 353 (536)
Q Consensus 303 ~~l~~~~-d~~i~i~d~~~~~~~~~~~~~------------~~~~i~~l~~~~~~~~l~tg~~d 353 (536)
+.++..- +..|.+.|..+++.+..+..+ ...-.+.++++|+++.|++.+.-
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 5555554 689999999999999887522 12356899999988766665543
No 246
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.66 E-value=1e-06 Score=92.56 Aligned_cols=186 Identities=16% Similarity=0.159 Sum_probs=110.2
Q ss_pred EEEecCCCEEEE-----EeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE-eCCEEEEEecCCe---
Q 009373 204 RAVAADKKLLVA-----GGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL-DLTRIYSGSWDMT--- 274 (536)
Q Consensus 204 ~~~~~~~~~l~s-----g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~dg~--- 274 (536)
.+++|||++|+- |+...+|++||+.++... ...+.+.. ...++| |++.|+.++.+..
T Consensus 134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~------------~~~~~~~k--~~~~~WsDg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPL------------ETPLKDVK--FSGISWLGNEGFFYSSYDKPDGS 199 (693)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEE------------EEEEEEEE--SCCCEEETTTEEEEEESSCCC--
T ss_pred EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCC------------ccccCCce--eccEEEeCCCEEEEEEecCcccc
Confidence 367799998884 333467999999887411 11111110 123345 7888888887743
Q ss_pred ----------EEEEeCCCceE--eEeeec----cccEEEE--eecCCEEEEec--C---CcEEEEeCCCCc-EEEEEccc
Q 009373 275 ----------VRVWDRALLKC--LKVLRH----SDWVYGL--APHDTTVASTS--G---SDVYIWDTNSGC-LLTVVNGA 330 (536)
Q Consensus 275 ----------i~iwd~~~~~~--~~~~~~----~~~v~~~--~~~~~~l~~~~--d---~~i~i~d~~~~~-~~~~~~~~ 330 (536)
|++|++.++.. ...+.. ......+ ++++++++... + +.|+++|+.++. ....+. .
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~-~ 278 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ-G 278 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE-C
T ss_pred cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe-C
Confidence 99999987643 222322 2234444 48999876543 2 479999998763 334443 2
Q ss_pred cccceEEEEEeCCCCEEE-EEcCC---CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEEeC-CC--cEE
Q 009373 331 HVGNTKSLARSHTGDFLF-TGGED---GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAAG-DG--KLS 403 (536)
Q Consensus 331 ~~~~i~~l~~~~~~~~l~-tg~~d---g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~-dg--~i~ 403 (536)
+....... ++++|..|+ ....+ +.|..+|+.++.. .....+..|...+..+...+++|+.... ++ .|+
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~----~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~ 353 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP----AHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVE 353 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG----GGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc----cccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEE
Confidence 44444444 566666554 44433 5788899877631 1123445555544455555677766655 44 688
Q ss_pred EEECCc
Q 009373 404 LIDVRK 409 (536)
Q Consensus 404 vwd~~~ 409 (536)
+||+..
T Consensus 354 ~~d~~g 359 (693)
T 3iuj_A 354 QFDYEG 359 (693)
T ss_dssp EECTTS
T ss_pred EEECCC
Confidence 888764
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.65 E-value=1.3e-05 Score=71.20 Aligned_cols=175 Identities=11% Similarity=0.020 Sum_probs=117.0
Q ss_pred CCCEEEEEeCCC--cEEEEEcccCccceecccCcccccceEEeeCCc-cCEEEEEEeCCEEEEEe-cCCeEEEEeCCCce
Q 009373 209 DKKLLVAGGTDG--FIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHE-GPITSLALDLTRIYSGS-WDMTVRVWDRALLK 284 (536)
Q Consensus 209 ~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~l~s~s-~dg~i~iwd~~~~~ 284 (536)
++.++.+.+.+| .|+++|+.+++. ...+.-.. -.-..++.+++.|+... .++.+.+||..+.+
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv-------------~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKT-------------LQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCE-------------EEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred CCEEEEECCCCCCceEEEEECCCCcE-------------EEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence 555666666666 899999988752 22221111 12244677777776665 58899999999999
Q ss_pred EeEeeeccccEEEEeecCCEEEEec-CCcEEEEeCCCCcEEEEEcccc---c-cceEEEEEeCCCCEEEEEcCCCcEEEE
Q 009373 285 CLKVLRHSDWVYGLAPHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAH---V-GNTKSLARSHTGDFLFTGGEDGAIHMY 359 (536)
Q Consensus 285 ~~~~~~~~~~v~~~~~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~---~-~~i~~l~~~~~~~~l~tg~~dg~i~iw 359 (536)
.+.++.....-..+++++..|+.+. ++.|.++|..+.+.+..+.-+. . ..++.+.+. +|...+....++.|.+.
T Consensus 119 ~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vI 197 (262)
T 3nol_A 119 QVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRI 197 (262)
T ss_dssp EEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEE
Confidence 9999985555467778887777666 6789999999999888875321 1 345567776 67766666678899999
Q ss_pred EcccCccccccceeeecc-------CCCCCeEEEEEcC--CeEEEEeC
Q 009373 360 EIINDCTEANVLLVATWI-------PHTGPVNSLAFEF--PWLVSAAG 398 (536)
Q Consensus 360 d~~~~~~~~~~~~~~~~~-------~h~~~v~~l~~~~--~~l~s~s~ 398 (536)
|..++.....+.. ..+. .-....+.|+|+| +.|+..+.
T Consensus 198 Dp~tG~V~~~Id~-~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 198 DPETGKVTGIIDL-NGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp CTTTCBEEEEEEC-TTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ECCCCcEEEEEEC-CcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 9999843221111 0011 1134679999987 45555554
No 248
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.63 E-value=1.3e-05 Score=81.71 Aligned_cols=237 Identities=15% Similarity=0.088 Sum_probs=137.1
Q ss_pred EEEEeCCCcEEEEECCCCceeeeeCCCCc----eEEE-EecCCCEEEEEe------CCCcEEEEEcccCccce-ecccCc
Q 009373 173 LFTSGYDSIVRMWHLEDGFSIASSKPLGC----TIRA-VAADKKLLVAGG------TDGFIHCWRAVEVLPHL-FDISGS 240 (536)
Q Consensus 173 l~sgs~dg~v~iwd~~~~~~~~~~~~~~~----~v~~-~~~~~~~l~sg~------~dg~i~vwd~~~~~~~~-~~~~~~ 240 (536)
|+.++.|+.|..+|..+|+.+........ .+.+ -...+..+++++ .+|.|+.+|..+++..- +.....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~ 203 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP 203 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCC
Confidence 88888999999999999998876533210 1110 001234566655 38999999999886421 111100
Q ss_pred cccc----------ce-------------EEeeCCccCE-EEEEE--eCCEEEEEecC----------------CeEEEE
Q 009373 241 EKQN----------TQ-------------FRLWEHEGPI-TSLAL--DLTRIYSGSWD----------------MTVRVW 278 (536)
Q Consensus 241 ~~~~----------~~-------------~~~~~h~~~v-~~l~~--~~~~l~s~s~d----------------g~i~iw 278 (536)
.... .. ..+..-.+.+ ..+++ ..+.++.++.+ +.|..+
T Consensus 204 ~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al 283 (599)
T 1w6s_A 204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR 283 (599)
T ss_dssp HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred ccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE
Confidence 0000 00 0000000111 12233 45677776655 389999
Q ss_pred eCCCceEeEeee---ccc--------cEE-EEe-ecC---CEEEEec-CCcEEEEeCCCCcEEEEEcccc----------
Q 009373 279 DRALLKCLKVLR---HSD--------WVY-GLA-PHD---TTVASTS-GSDVYIWDTNSGCLLTVVNGAH---------- 331 (536)
Q Consensus 279 d~~~~~~~~~~~---~~~--------~v~-~~~-~~~---~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~---------- 331 (536)
|..+++.+..++ |.. ++. .+. .++ ..++.++ +|.+.++|..+|+.+.......
T Consensus 284 d~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~ 363 (599)
T 1w6s_A 284 DADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDL 363 (599)
T ss_dssp ETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECT
T ss_pred eCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccccc
Confidence 999999998877 211 122 222 356 4566565 8999999999999887654211
Q ss_pred -c-cce--------------------------EEEEEeCCCCEEEEEc--------------------------------
Q 009373 332 -V-GNT--------------------------KSLARSHTGDFLFTGG-------------------------------- 351 (536)
Q Consensus 332 -~-~~i--------------------------~~l~~~~~~~~l~tg~-------------------------------- 351 (536)
. .++ ..++++|+..++++..
T Consensus 364 ~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~ 443 (599)
T 1w6s_A 364 KTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPK 443 (599)
T ss_dssp TTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTT
T ss_pred CCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCc
Confidence 0 011 2356777666655432
Q ss_pred -------CCCcEEEEEcccCccccccceeeeccCCCCCeE--EEEEcCCeEEEEeCCCcEEEEECCcccccCCC
Q 009373 352 -------EDGAIHMYEIINDCTEANVLLVATWIPHTGPVN--SLAFEFPWLVSAAGDGKLSLIDVRKLLRSGRP 416 (536)
Q Consensus 352 -------~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~--~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~ 416 (536)
.+|.+.-||+.+++ .+-.... ..++. .+...+..++.++.||.++.||.++++..++.
T Consensus 444 ~~~~~~~~~G~l~A~D~~tG~------~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 444 GDRQNYEGLGQIKAYNAITGD------YKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp SBTTTTBCCEEEEEECTTTCC------EEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCcccCCCcCeEEEEECCCCC------EEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEe
Confidence 34677778877773 2222210 11111 24445688889999999999999997665543
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.61 E-value=9.3e-06 Score=84.49 Aligned_cols=240 Identities=13% Similarity=0.078 Sum_probs=143.2
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeeeeCCCC----ceEEE-EecCCCEEEEEeC------CCcEEEEEcccCcccee-cc
Q 009373 170 AKLLFTSGYDSIVRMWHLEDGFSIASSKPLG----CTIRA-VAADKKLLVAGGT------DGFIHCWRAVEVLPHLF-DI 237 (536)
Q Consensus 170 ~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~----~~v~~-~~~~~~~l~sg~~------dg~i~vwd~~~~~~~~~-~~ 237 (536)
+..++.++.|+.|..+|..+|+.+..+.... ..+.+ -...+..++++.. +|.|..+|..+++..-. ..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 5678888999999999999999887764421 01100 0012445666543 58999999998864211 11
Q ss_pred cC-ccccc----------------ceEEeeCCccCEEEEEE--eCCEEEEEecCC-------------------eEEEEe
Q 009373 238 SG-SEKQN----------------TQFRLWEHEGPITSLAL--DLTRIYSGSWDM-------------------TVRVWD 279 (536)
Q Consensus 238 ~~-~~~~~----------------~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg-------------------~i~iwd 279 (536)
.. ..... ......++......+++ +.+.++.++.++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 00 00000 00000011111223556 357888887766 499999
Q ss_pred CCCceEeEeeec---c-------ccEE--EEeecCC---EEEEec-CCcEEEEeCCCCcEEEEEccccc-----------
Q 009373 280 RALLKCLKVLRH---S-------DWVY--GLAPHDT---TVASTS-GSDVYIWDTNSGCLLTVVNGAHV----------- 332 (536)
Q Consensus 280 ~~~~~~~~~~~~---~-------~~v~--~~~~~~~---~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~----------- 332 (536)
..+++.+..++. . .+.. .+..+++ .++.++ +|.++++|..+|+.+........
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g 356 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence 999999988762 1 1111 2334665 566666 89999999999998854431110
Q ss_pred cce------------------------EEEEEeCCCCEEEEE------------------------------------cC
Q 009373 333 GNT------------------------KSLARSHTGDFLFTG------------------------------------GE 352 (536)
Q Consensus 333 ~~i------------------------~~l~~~~~~~~l~tg------------------------------------~~ 352 (536)
.++ ..++++|+..++++. ..
T Consensus 357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~ 436 (668)
T 1kv9_A 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV 436 (668)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred CccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCc
Confidence 000 125777776665542 13
Q ss_pred CCcEEEEEcccCccccccceeeeccCCCCC-eEEEEEcCCeEEEEeCCCcEEEEECCcccccCC
Q 009373 353 DGAIHMYEIINDCTEANVLLVATWIPHTGP-VNSLAFEFPWLVSAAGDGKLSLIDVRKLLRSGR 415 (536)
Q Consensus 353 dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~-v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~ 415 (536)
+|.|..||+.+++ .+-....+... -..+...+.++++++.||.|++||.++++..+.
T Consensus 437 ~g~l~A~D~~tG~------~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~ 494 (668)
T 1kv9_A 437 SGALLAWDPVKQK------AAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQ 494 (668)
T ss_dssp EEEEEEEETTTTE------EEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred cceEEEEeCCCCc------EEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheE
Confidence 4789999998883 33222222111 123445678999999999999999998755543
No 250
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.60 E-value=5.7e-05 Score=80.67 Aligned_cols=277 Identities=13% Similarity=0.097 Sum_probs=164.7
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCC-ce-EEEEec-CCCEEEEEeCCCcEEEEEcccCccceecc
Q 009373 161 VLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLG-CT-IRAVAA-DKKLLVAGGTDGFIHCWRAVEVLPHLFDI 237 (536)
Q Consensus 161 V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~-~~-v~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 237 (536)
|.++...++|.+.+. +. +-+..||..+++......... .. +.++.. ....|..|+.++.+..|+..++....+
T Consensus 133 i~~i~~d~~g~lwi~-t~-~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~-- 208 (795)
T 4a2l_A 133 VNGIEEISPEQLLIS-TP-EGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKV-- 208 (795)
T ss_dssp CCEEEEEETTEEEEE-ET-TEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEEEESSSCEEEEETTTCCEEEC--
T ss_pred EEEEEECCCCCEEEE-EC-CceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEe--
Confidence 888888888776654 44 458899987764432211111 12 555542 234566677765688898765431110
Q ss_pred cCcccccceEEeeCCccCEEEEEE-eCCEEEEEecCCeEEEEeCCCceEeEeee--------ccccEEEEe--ecCCEEE
Q 009373 238 SGSEKQNTQFRLWEHEGPITSLAL-DLTRIYSGSWDMTVRVWDRALLKCLKVLR--------HSDWVYGLA--PHDTTVA 306 (536)
Q Consensus 238 ~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--------~~~~v~~~~--~~~~~l~ 306 (536)
....+...|.++.. ..+.+..|+.++-+..||..+++...... ....|.++. .++.+.+
T Consensus 209 ----------~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi 278 (795)
T 4a2l_A 209 ----------IPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI 278 (795)
T ss_dssp ----------C----CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE
T ss_pred ----------cCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE
Confidence 00113456888887 45677777766669999988766543321 135688887 4566555
Q ss_pred EecCCcEEEEeCCCCcEEEEEcc------ccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeec----
Q 009373 307 STSGSDVYIWDTNSGCLLTVVNG------AHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATW---- 376 (536)
Q Consensus 307 ~~~d~~i~i~d~~~~~~~~~~~~------~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~---- 376 (536)
++.+ .|.+||..+++....... -....|.++...++|. |..|+.++-|..|+...... ......
T Consensus 279 gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~----~~~~~~~~~~ 352 (795)
T 4a2l_A 279 GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRF----KNIRNIPYKN 352 (795)
T ss_dssp EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSS----EEECCCTTSS
T ss_pred EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccc----eEEcCCCCCC
Confidence 5545 799999887764433211 1235799999998887 55677777799998765421 111110
Q ss_pred cCCCCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeee--ccccccEEEEEecCC-E-
Q 009373 377 IPHTGPVNSLAFEF-PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRML--HGFECNLLSVDIGAD-R- 451 (536)
Q Consensus 377 ~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~-~- 451 (536)
.-....|.++..++ ..|..|+.++-|..||..+..-.. ........ .-....|.++..+.+ .
T Consensus 353 ~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~~v~~i~~d~~g~~ 419 (795)
T 4a2l_A 353 SLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTS-------------YTLQEDESARGIGSNNIKAVYVDEKKSL 419 (795)
T ss_dssp SCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEE-------------ECCC------CCSCSCEEEEEEETTTTE
T ss_pred CCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEE-------------EecCCCCcccCCCCccEEEEEEcCCCCE
Confidence 11345799999875 678889988889999987531110 00000000 001245666665433 3
Q ss_pred EEEecCCCeEEEEeCCchh
Q 009373 452 IVCGGEEGIVRIWNFSQAF 470 (536)
Q Consensus 452 l~sg~~Dg~i~vW~~~~~~ 470 (536)
|..|+.++-|..||..++.
T Consensus 420 lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 420 VYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp EEEEETTTEEEEEETTTCC
T ss_pred EEEEeCcCceeEEeCCCCc
Confidence 7777777779999987653
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.60 E-value=2.2e-05 Score=79.95 Aligned_cols=239 Identities=15% Similarity=0.072 Sum_probs=139.7
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeeeeCCCCc----eEEE-EecCCCEEEEEeC------CCcEEEEEcccCcccee-cc
Q 009373 170 AKLLFTSGYDSIVRMWHLEDGFSIASSKPLGC----TIRA-VAADKKLLVAGGT------DGFIHCWRAVEVLPHLF-DI 237 (536)
Q Consensus 170 ~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~----~v~~-~~~~~~~l~sg~~------dg~i~vwd~~~~~~~~~-~~ 237 (536)
+..++.++.|+.|..+|..+|+.+........ .+.+ -...+..+++++. +|.|..+|..+++..-. ..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 56788888999999999999998876543210 1110 0012455666655 79999999998863211 11
Q ss_pred cCcccc---cc-------e--------EE----eeCCc-cCE-EEEEEe--CCEEEEEecC----------------CeE
Q 009373 238 SGSEKQ---NT-------Q--------FR----LWEHE-GPI-TSLALD--LTRIYSGSWD----------------MTV 275 (536)
Q Consensus 238 ~~~~~~---~~-------~--------~~----~~~h~-~~v-~~l~~~--~~~l~s~s~d----------------g~i 275 (536)
...... .+ . .. ...+. +.+ ..++++ .+.++.++.+ +.|
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v 274 (571)
T 2ad6_A 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred CCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEE
Confidence 000000 00 0 00 00000 001 123443 3566655532 369
Q ss_pred EEEeCCCceEeEeeecc-----------ccEE-EEeecCC---EEEEec-CCcEEEEeCCCCcEEEEEccccc-------
Q 009373 276 RVWDRALLKCLKVLRHS-----------DWVY-GLAPHDT---TVASTS-GSDVYIWDTNSGCLLTVVNGAHV------- 332 (536)
Q Consensus 276 ~iwd~~~~~~~~~~~~~-----------~~v~-~~~~~~~---~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~------- 332 (536)
..+|..+++.+..++.. .++. ....+++ .++.++ +|.++++|..+|+.+..+.....
T Consensus 275 ~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~ 354 (571)
T 2ad6_A 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKV 354 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred EEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccc
Confidence 99999999998887621 1121 1224664 455566 79999999999998877643220
Q ss_pred -----cce--------------------------EEEEEeCCCCEEEEEc------------------------------
Q 009373 333 -----GNT--------------------------KSLARSHTGDFLFTGG------------------------------ 351 (536)
Q Consensus 333 -----~~i--------------------------~~l~~~~~~~~l~tg~------------------------------ 351 (536)
.++ ..++++|+..++++..
T Consensus 355 d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 434 (571)
T 2ad6_A 355 DLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPG 434 (571)
T ss_dssp CTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred cccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccC
Confidence 111 2357888877776653
Q ss_pred -------CCCcEEEEEcccCccccccceeeeccCCCCCeE--EEEEcCCeEEEEeCCCcEEEEECCcccccCC
Q 009373 352 -------EDGAIHMYEIINDCTEANVLLVATWIPHTGPVN--SLAFEFPWLVSAAGDGKLSLIDVRKLLRSGR 415 (536)
Q Consensus 352 -------~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~--~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~ 415 (536)
.+|.|..||+.+++ .+-..... ..+. .+...+..++.++.||.|+.+|.++++..++
T Consensus 435 ~~~~~~~~~g~l~a~D~~tG~------~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~ 500 (571)
T 2ad6_A 435 PNGPTKKEMGQIRAFDLTTGK------AKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWN 500 (571)
T ss_dssp TTSTTSCCCEEEEEECTTTCC------EEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ccccCCCCCCeEEEEECCCCC------EEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEE
Confidence 34778888888873 32222211 1121 1233467888899999999999998765543
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.59 E-value=1.1e-05 Score=71.72 Aligned_cols=179 Identities=12% Similarity=0.054 Sum_probs=118.1
Q ss_pred EEEec-CCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEE-ecCCeEEEEeCC
Q 009373 204 RAVAA-DKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSG-SWDMTVRVWDRA 281 (536)
Q Consensus 204 ~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~-s~dg~i~iwd~~ 281 (536)
..+.. ++.++++.+.+|.|+++|+.+++. ...+......-..++++++.|+.. -.++.+.+||..
T Consensus 58 qGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv-------------~~~~l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGTLRQLSLESAQP-------------VWMERLGNIFAEGLASDGERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp EEEEEETTEEEEEETTTTEEEECCSSCSSC-------------SEEEECTTCCEEEEEECSSCEEEEESSSCEEEEEETT
T ss_pred ceEEEECCEEEEEcCCCCEEEEEECCCCcE-------------EeEECCCCcceeEEEEeCCEEEEEEccCCEEEEEECC
Confidence 34443 345666777788999999988752 111111122224467766555544 468899999999
Q ss_pred CceEeEeeeccccEEEEeecCCEEEEec-CCcEEEEeCCCCcEEEEEcccc-c---cceEEEEEeCCCCEEEEEcCCCcE
Q 009373 282 LLKCLKVLRHSDWVYGLAPHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAH-V---GNTKSLARSHTGDFLFTGGEDGAI 356 (536)
Q Consensus 282 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~-~---~~i~~l~~~~~~~~l~tg~~dg~i 356 (536)
+.+.+.++.....-..+++++..|+.+. ++.|.++|..+.+.+.++.-+. . ..++.+.|. +|...+....+..|
T Consensus 125 Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I 203 (268)
T 3nok_A 125 PPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDV 203 (268)
T ss_dssp TTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEE
T ss_pred cCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeE
Confidence 9999999985555567778888877776 7899999999999888875321 1 245667776 67666666678899
Q ss_pred EEEEcccCcccccccee--ee-----ccCCCCCeEEEEEcC--C-eEEEE
Q 009373 357 HMYEIINDCTEANVLLV--AT-----WIPHTGPVNSLAFEF--P-WLVSA 396 (536)
Q Consensus 357 ~iwd~~~~~~~~~~~~~--~~-----~~~h~~~v~~l~~~~--~-~l~s~ 396 (536)
.+.|..++.....+..- .. ...-....+.|+++| + +++||
T Consensus 204 ~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 204 LEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 99999988533221110 00 011234679999986 3 44444
No 253
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.56 E-value=6.9e-06 Score=78.14 Aligned_cols=203 Identities=8% Similarity=0.010 Sum_probs=120.4
Q ss_pred CccccEEEEEEecCCCEEEEEeC-----CCcEEEEECCCCceeeeeCCC------Cc--eEEEEecCCCEE-EEEe---C
Q 009373 156 GHTEAVLTVFVLASAKLLFTSGY-----DSIVRMWHLEDGFSIASSKPL------GC--TIRAVAADKKLL-VAGG---T 218 (536)
Q Consensus 156 ~h~~~V~~v~~~~~~~~l~sgs~-----dg~v~iwd~~~~~~~~~~~~~------~~--~v~~~~~~~~~l-~sg~---~ 218 (536)
+|-..+..++++++++++++-.. ++.|.+||+.+++.+..+... .. .-.++.+++..+ ++.. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 56778999999999887776544 578999999999876655321 11 234555654444 5544 6
Q ss_pred CCcEEEEEcccCccceecccC--cccc-cceEEeeC--------------CccCEEEEEE--eCCEEEEEecCC-eEEEE
Q 009373 219 DGFIHCWRAVEVLPHLFDISG--SEKQ-NTQFRLWE--------------HEGPITSLAL--DLTRIYSGSWDM-TVRVW 278 (536)
Q Consensus 219 dg~i~vwd~~~~~~~~~~~~~--~~~~-~~~~~~~~--------------h~~~v~~l~~--~~~~l~s~s~dg-~i~iw 278 (536)
++.|.+||+.++..... +.. .... .......+ ....+..+++ +++.|+.+..++ .+..+
T Consensus 144 ~~~i~v~d~~~g~~~r~-~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARV-LQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp GCEEEEEETTTCCEEEE-CTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred CCeEEEEECCCCCEEEE-ecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEE
Confidence 78999999987642211 100 0000 00000000 1124677888 567788877666 44444
Q ss_pred eCC---Cce-----E---eEeeeccccE--EEEeecCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCC
Q 009373 279 DRA---LLK-----C---LKVLRHSDWV--YGLAPHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTG 344 (536)
Q Consensus 279 d~~---~~~-----~---~~~~~~~~~v--~~~~~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~ 344 (536)
+.. .+. . +....+.... .++.+++.++++.. ++.|.+||..+++........+...+.++++.+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g 302 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDG 302 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTS
T ss_pred EHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCC
Confidence 421 110 0 0111122222 34557888888877 78999999966764433322234568999999999
Q ss_pred CEEEEEcCCCcEEEE
Q 009373 345 DFLFTGGEDGAIHMY 359 (536)
Q Consensus 345 ~~l~tg~~dg~i~iw 359 (536)
.++++.+..+.+.+|
T Consensus 303 ~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 303 YLYFDCNQLHHSAPL 317 (343)
T ss_dssp CEEEEECCGGGSGGG
T ss_pred cEEEEeCcccccccc
Confidence 888887765544433
No 254
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.53 E-value=2.3e-05 Score=81.62 Aligned_cols=231 Identities=11% Similarity=0.112 Sum_probs=127.8
Q ss_pred EEEEec-CCCEEEEEeCCC-----------cEEEEECCCCce--eeee-CCCC--ceEEEEecCCCEEEEEeC-CCcEEE
Q 009373 163 TVFVLA-SAKLLFTSGYDS-----------IVRMWHLEDGFS--IASS-KPLG--CTIRAVAADKKLLVAGGT-DGFIHC 224 (536)
Q Consensus 163 ~v~~~~-~~~~l~sgs~dg-----------~v~iwd~~~~~~--~~~~-~~~~--~~v~~~~~~~~~l~sg~~-dg~i~v 224 (536)
.+++.+ ++++++.|+.+. .+.+||..+++- +..+ ..+. +...++..++.+++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456677 888889888653 588999987753 2222 1122 223455688999999984 468999
Q ss_pred EEcccCccceecccCcccccceEEeeCCccCEEEEEE-eCCEEEEEe-cC-----CeEEEEeCCCceEeEe-------ee
Q 009373 225 WRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL-DLTRIYSGS-WD-----MTVRVWDRALLKCLKV-------LR 290 (536)
Q Consensus 225 wd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s-~d-----g~i~iwd~~~~~~~~~-------~~ 290 (536)
||..+..-. ....+......-..... +++.++.|+ .+ ..+.+||..+.+-... +.
T Consensus 270 yd~~t~~W~-----------~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~ 338 (656)
T 1k3i_A 270 YDSSSDSWI-----------PGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPML 338 (656)
T ss_dssp EEGGGTEEE-----------ECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGC
T ss_pred ecCcCCcee-----------ECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccc
Confidence 998765311 11111112222334445 788888888 44 5799999987664332 00
Q ss_pred ---------ccccEEEEe-ecCCEEEEecCCcEEEEeCCCCcEEEEEccccc---------cceEEEEEeC-CCCEEEEE
Q 009373 291 ---------HSDWVYGLA-PHDTTVASTSGSDVYIWDTNSGCLLTVVNGAHV---------GNTKSLARSH-TGDFLFTG 350 (536)
Q Consensus 291 ---------~~~~v~~~~-~~~~~l~~~~d~~i~i~d~~~~~~~~~~~~~~~---------~~i~~l~~~~-~~~~l~tg 350 (536)
....+..+- .++..+..+....+..||..+......... +. ..-.++.+.. ++++++.|
T Consensus 339 ~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~-~~~~~~~~~~~~~~~av~~~~~~~~i~v~G 417 (656)
T 1k3i_A 339 TADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGK-RQSNRGVAPDAMCGNAVMYDAVKGKILTFG 417 (656)
T ss_dssp CCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEE-CEETTEECCCCBTCEEEEEETTTTEEEEEC
T ss_pred cccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCc-cccccccCCCCCCCceEeccCCCCeEEEEe
Confidence 011111111 223333222345688999988765433321 11 1234444543 67788888
Q ss_pred cCCC-----------cEEEEEcccCccccccceee--eccCCCCCeEEEEE-cCCeEEEEeCC-----------CcEEEE
Q 009373 351 GEDG-----------AIHMYEIINDCTEANVLLVA--TWIPHTGPVNSLAF-EFPWLVSAAGD-----------GKLSLI 405 (536)
Q Consensus 351 ~~dg-----------~i~iwd~~~~~~~~~~~~~~--~~~~h~~~v~~l~~-~~~~l~s~s~d-----------g~i~vw 405 (536)
+.++ .|.+||..+..- ..+. .+......-.++.. ++..++.|+.+ ..+.+|
T Consensus 418 G~~~~~~~~~~~~~~~v~~yd~~~~~W----~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~y 493 (656)
T 1k3i_A 418 GSPDYQDSDATTNAHIITLGEPGTSPN----TVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIY 493 (656)
T ss_dssp CBSSSSSSBCCCCEEEEECCSTTSCCE----EEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEE
T ss_pred CCCCCCCCCcCCcceEEEcCCCCCCCe----eEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEE
Confidence 7543 577777765521 1111 11111122233444 56788888754 468899
Q ss_pred ECCc
Q 009373 406 DVRK 409 (536)
Q Consensus 406 d~~~ 409 (536)
|..+
T Consensus 494 dp~t 497 (656)
T 1k3i_A 494 VPEQ 497 (656)
T ss_dssp EGGG
T ss_pred cCCC
Confidence 9876
No 255
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.45 E-value=0.00026 Score=75.34 Aligned_cols=285 Identities=10% Similarity=0.035 Sum_probs=163.9
Q ss_pred cccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeC--------------CCCceEEEEecC-CCEEEEEeCCCcE
Q 009373 158 TEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSK--------------PLGCTIRAVAAD-KKLLVAGGTDGFI 222 (536)
Q Consensus 158 ~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~--------------~~~~~v~~~~~~-~~~l~sg~~dg~i 222 (536)
...|.++...++|. |..|+..+-|.++|..++....... .....|.++..| ...|..|+.++-|
T Consensus 257 ~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl 335 (781)
T 3v9f_A 257 SSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGI 335 (781)
T ss_dssp CCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCE
T ss_pred CceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeE
Confidence 45689998877766 5556665568889987764322111 123467777643 3467888888888
Q ss_pred EEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeC-CEEEEEecCCeEEEEeCCCceEeEeee----ccccEEE
Q 009373 223 HCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDL-TRIYSGSWDMTVRVWDRALLKCLKVLR----HSDWVYG 297 (536)
Q Consensus 223 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~----~~~~v~~ 297 (536)
..++..+.....+...... .. ...-....|.++..+. +.|..|+.++-|..||..++....... ....|.+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~--~~--~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~ 411 (781)
T 3v9f_A 336 NFISNAPPTFHTWSYSPTQ--MN--ESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLC 411 (781)
T ss_dssp EEECSSCCSCEEEC----C--CC--SSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEE
T ss_pred EEeCCCCCcceeeccCccc--cc--cCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEE
Confidence 8998765432211110000 00 0001235688998854 678888878889999987654432211 3456888
Q ss_pred Ee--ecCCEEEEecCCcEEEEeCCCCcEEEEEc-cccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceee
Q 009373 298 LA--PHDTTVASTSGSDVYIWDTNSGCLLTVVN-GAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVA 374 (536)
Q Consensus 298 ~~--~~~~~l~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~ 374 (536)
+. .++.+.+++.++.+..+|..+++...... ......|.++...++|.+ ..|+. +-+..||..++.. ....
T Consensus 412 i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-wigt~-~Gl~~~~~~~~~~----~~~~ 485 (781)
T 3v9f_A 412 SLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKI-WIGTH-AGVFVIDLASKKV----IHHY 485 (781)
T ss_dssp EEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEE-EEEET-TEEEEEESSSSSC----CEEE
T ss_pred EEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCE-EEEEC-CceEEEeCCCCeE----Eecc
Confidence 87 35666665556789999988775433221 113457899988887764 44555 4588899876521 1111
Q ss_pred ecc---CCCCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC
Q 009373 375 TWI---PHTGPVNSLAFEF-PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD 450 (536)
Q Consensus 375 ~~~---~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 450 (536)
... .....|.++..++ ..|..|+.++-|..||..+..-. ..... . .-....|.++..+.+
T Consensus 486 ~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-------------~~~~~-~--~l~~~~i~~i~~d~~ 549 (781)
T 3v9f_A 486 DTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVR-------------KFNQY-E--GFCSNTINQIYRSSK 549 (781)
T ss_dssp CTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEE-------------EECTT-T--TCSCSCEEEEEECTT
T ss_pred cCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEE-------------EccCC-C--CCCCCeeEEEEECCC
Confidence 111 1146789998875 67777777555888887653110 00000 0 001245666666543
Q ss_pred -EEEEecCCCeEEEEeCCch
Q 009373 451 -RIVCGGEEGIVRIWNFSQA 469 (536)
Q Consensus 451 -~l~sg~~Dg~i~vW~~~~~ 469 (536)
.|..|+.+|.|..||..++
T Consensus 550 g~lWi~T~~Glv~~~d~~~~ 569 (781)
T 3v9f_A 550 GQMWLATGEGLVCFPSARNF 569 (781)
T ss_dssp SCEEEEETTEEEEESCTTTC
T ss_pred CCEEEEECCCceEEECCCCC
Confidence 3444444676588887654
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.43 E-value=0.00015 Score=63.83 Aligned_cols=179 Identities=13% Similarity=-0.004 Sum_probs=114.6
Q ss_pred EEecCCC-EEEEEeCC--CcEEEEEcccCccceecccCcccccceEEeeCC-ccCEEEEEEeCCEEEEE-ecCCeEEEEe
Q 009373 205 AVAADKK-LLVAGGTD--GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEH-EGPITSLALDLTRIYSG-SWDMTVRVWD 279 (536)
Q Consensus 205 ~~~~~~~-~l~sg~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~~~~~l~s~-s~dg~i~iwd 279 (536)
.+..++. ++.+.+.+ ..|+++|+.+++. .....-. ...-..+++.++.|+.. -.++.+.+||
T Consensus 25 GL~~~~~~LyestG~~g~S~v~~vD~~tgkv-------------~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 25 GLFYLRGHLYESTGETGRSSVRKVDLETGRI-------------LQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp EEEEETTEEEEEECCTTSCEEEEEETTTCCE-------------EEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEE
T ss_pred cEEEECCEEEEECCCCCCceEEEEECCCCCE-------------EEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEE
Confidence 4443344 44455554 4899999988742 1222111 11223456666666554 4688999999
Q ss_pred CCCceEeEeeeccccEEEEeecCCEEEEec-CCcEEEEeCCCCcEEEEEccccc----cceEEEEEeCCCCEEEEEcCCC
Q 009373 280 RALLKCLKVLRHSDWVYGLAPHDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHV----GNTKSLARSHTGDFLFTGGEDG 354 (536)
Q Consensus 280 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~----~~i~~l~~~~~~~~l~tg~~dg 354 (536)
..+.+.+.++.....-..+++++..|+.+. ++.|.++|..+.+.+.++.-+.. ..++.+.+. +|...+....+.
T Consensus 92 ~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~ 170 (243)
T 3mbr_X 92 LATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTS 170 (243)
T ss_dssp TTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTT
T ss_pred CCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCC
Confidence 999999999985555567777777666655 78899999999998888753211 245666665 666666666788
Q ss_pred cEEEEEcccCccccccceeeecc--------CCCCCeEEEEEcC--CeEEEEeC
Q 009373 355 AIHMYEIINDCTEANVLLVATWI--------PHTGPVNSLAFEF--PWLVSAAG 398 (536)
Q Consensus 355 ~i~iwd~~~~~~~~~~~~~~~~~--------~h~~~v~~l~~~~--~~l~s~s~ 398 (536)
.|.+.|..++.....+.. ..+. ......+.|+++| +.|+..+.
T Consensus 171 ~I~vIDp~tG~V~~~idl-~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 171 RIARIDPASGKVVAWIDL-QALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEECTTTCBEEEEEEC-GGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred eEEEEECCCCCEEEEEEC-CcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 999999999853222111 1111 1234679999987 45555443
No 257
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.40 E-value=0.00024 Score=68.24 Aligned_cols=191 Identities=10% Similarity=0.040 Sum_probs=117.0
Q ss_pred cCCCEE-EEEeCCCcEEEEEcccCccceecccCcccccceEEee------C-CccCEEEEEE--eCCEEEEEecC-----
Q 009373 208 ADKKLL-VAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLW------E-HEGPITSLAL--DLTRIYSGSWD----- 272 (536)
Q Consensus 208 ~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~------~-h~~~v~~l~~--~~~~l~s~s~d----- 272 (536)
.+.++| ++|..+++|+++|+.+.... ......+. . ....-..+.. ++ .++++..+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~---------p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~ 162 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPRE---------PKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEG 162 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTS---------CEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCS
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCC---------ceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCC
Confidence 445554 55667899999998654210 11111110 0 0011222333 45 66666555
Q ss_pred -CeEEEEeCCCceEeEeeecc-c---cE--EEEeecCCEEEEec--------------------CCcEEEEeCCCCcEEE
Q 009373 273 -MTVRVWDRALLKCLKVLRHS-D---WV--YGLAPHDTTVASTS--------------------GSDVYIWDTNSGCLLT 325 (536)
Q Consensus 273 -g~i~iwd~~~~~~~~~~~~~-~---~v--~~~~~~~~~l~~~~--------------------d~~i~i~d~~~~~~~~ 325 (536)
|.|.++|..+++.+..+... . .- .-++|+++.++++. +.+|.+||+.+++.+.
T Consensus 163 ~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~ 242 (462)
T 2ece_A 163 PGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH 242 (462)
T ss_dssp CCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEee
Confidence 78999999999999888722 1 12 23368888888884 6889999999998888
Q ss_pred EEccc-cccceEEEEE--eCCCCEEEEEc------CCCcEEEEEcccCcccccccee--ee--ccC-----------CCC
Q 009373 326 VVNGA-HVGNTKSLAR--SHTGDFLFTGG------EDGAIHMYEIINDCTEANVLLV--AT--WIP-----------HTG 381 (536)
Q Consensus 326 ~~~~~-~~~~i~~l~~--~~~~~~l~tg~------~dg~i~iwd~~~~~~~~~~~~~--~~--~~~-----------h~~ 381 (536)
++..+ .......+.| +|+++++++++ .+++|.+|....+.- .....+ .. ..+ -..
T Consensus 243 tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~-~~~~vIdi~~~~v~~~lp~~~~~f~~~~~ 321 (462)
T 2ece_A 243 SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKW-NAEKVIEIPAEPLEGNLPEILKPFKAVPP 321 (462)
T ss_dssp EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEE-EEEEEEEECCEECCSSCCGGGGGGTEECC
T ss_pred EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCce-eEEEEEeCCCccccccccccccccccCCC
Confidence 88653 2234555655 99999888777 456888777654311 000000 00 000 023
Q ss_pred CeEEEEEcC--CeEEEEeC-CCcEEEEECCc
Q 009373 382 PVNSLAFEF--PWLVSAAG-DGKLSLIDVRK 409 (536)
Q Consensus 382 ~v~~l~~~~--~~l~s~s~-dg~i~vwd~~~ 409 (536)
.+..|.+++ ++|+++.. .+.|.+||+..
T Consensus 322 ~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 322 LVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp CCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred ceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 467788875 67777665 68999999864
No 258
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.38 E-value=0.00017 Score=73.46 Aligned_cols=238 Identities=15% Similarity=0.122 Sum_probs=139.1
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeeeeCCCC---------ceEEEEe-cCCC-EEEEEeC------CCcEEEEEcccCcc
Q 009373 170 AKLLFTSGYDSIVRMWHLEDGFSIASSKPLG---------CTIRAVA-ADKK-LLVAGGT------DGFIHCWRAVEVLP 232 (536)
Q Consensus 170 ~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~---------~~v~~~~-~~~~-~l~sg~~------dg~i~vwd~~~~~~ 232 (536)
+..++.++.|+.|..+|..+|+.+....... .++..=. .+++ .+++++. +|.|..+|..+++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 5678888999999999999999887654322 2222111 1223 6666653 78999999998864
Q ss_pred ceecccCcccc-----cceEE----------------------ee--CCccCEEEEEE--eCCEEEEEec----------
Q 009373 233 HLFDISGSEKQ-----NTQFR----------------------LW--EHEGPITSLAL--DLTRIYSGSW---------- 271 (536)
Q Consensus 233 ~~~~~~~~~~~-----~~~~~----------------------~~--~h~~~v~~l~~--~~~~l~s~s~---------- 271 (536)
.-. ....... ..... .. +....-..+++ ..+.++.++.
T Consensus 197 ~W~-~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 197 IWM-RPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEE-EESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred Eee-cCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 221 1100000 00000 00 00000012344 3466666553
Q ss_pred ----------C----CeEEEEeCCCceEeEeee---cc--------ccEEE-Ee-ecCC---EEEEec-CCcEEEEeCCC
Q 009373 272 ----------D----MTVRVWDRALLKCLKVLR---HS--------DWVYG-LA-PHDT---TVASTS-GSDVYIWDTNS 320 (536)
Q Consensus 272 ----------d----g~i~iwd~~~~~~~~~~~---~~--------~~v~~-~~-~~~~---~l~~~~-d~~i~i~d~~~ 320 (536)
| +.|..+|..+++.+..++ |. .++.. .. .+++ .++.++ +|.++++|..+
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 689999999999998876 21 12221 11 3563 566666 89999999999
Q ss_pred CcEEEEEccccc------------cce--------------------------------EEEEEeCCCCEEEEEc-----
Q 009373 321 GCLLTVVNGAHV------------GNT--------------------------------KSLARSHTGDFLFTGG----- 351 (536)
Q Consensus 321 ~~~~~~~~~~~~------------~~i--------------------------------~~l~~~~~~~~l~tg~----- 351 (536)
|+.+..+..... .++ ..++++|+..++++..
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 998876643210 000 1345666655555432
Q ss_pred ----------------------------CCCcEEEEEcccCccccccceeeeccCCCCCeE--EEEEcCCeEEEEeCCCc
Q 009373 352 ----------------------------EDGAIHMYEIINDCTEANVLLVATWIPHTGPVN--SLAFEFPWLVSAAGDGK 401 (536)
Q Consensus 352 ----------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~--~l~~~~~~l~s~s~dg~ 401 (536)
.+|.|.-||+.+++ .+-..... .++. .+...+..++.++.||.
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~------~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~ 508 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGK------VVWEHKEH-LPLWAGVLATAGNLVFTGTGDGY 508 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCC------EEEEEEES-SCCCSCCEEETTTEEEEECTTSE
T ss_pred eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCC------EEEEecCC-CCCcccceEeCCCEEEEECCCCc
Confidence 25778888988883 22222111 1111 23345688999999999
Q ss_pred EEEEECCcccccCC
Q 009373 402 LSLIDVRKLLRSGR 415 (536)
Q Consensus 402 i~vwd~~~~~~~~~ 415 (536)
++.||.++++..++
T Consensus 509 l~A~D~~tG~~lW~ 522 (582)
T 1flg_A 509 FKAFDAKSGKELWK 522 (582)
T ss_dssp EEEEETTTCCEEEE
T ss_pred EEEEECCCCCEEEE
Confidence 99999999765554
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.37 E-value=0.0003 Score=65.48 Aligned_cols=222 Identities=9% Similarity=-0.035 Sum_probs=126.7
Q ss_pred ccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeC-CCCceEEEEecCCCEEEEEeCCC--cEEEEEcccCcccee
Q 009373 159 EAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSK-PLGCTIRAVAADKKLLVAGGTDG--FIHCWRAVEVLPHLF 235 (536)
Q Consensus 159 ~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~l~sg~~dg--~i~vwd~~~~~~~~~ 235 (536)
.....++|+++++++++-..++.|..||.... ....+. +....-+++.++++++++..... .|..++..++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~-- 108 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE-- 108 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE--
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE--
Confidence 45678999999998777778899999998754 322222 22222344557888655554332 4666666555311
Q ss_pred cccCcccccceEEeeCCccCEEEEEE-eCCEEEEEe-cCCeEEEEeCCCceE-eEee----------eccccEEEEeecC
Q 009373 236 DISGSEKQNTQFRLWEHEGPITSLAL-DLTRIYSGS-WDMTVRVWDRALLKC-LKVL----------RHSDWVYGLAPHD 302 (536)
Q Consensus 236 ~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s-~dg~i~iwd~~~~~~-~~~~----------~~~~~v~~~~~~~ 302 (536)
..... ........++. .+..++... .++.|..+|..+++. +... ..-.....+++++
T Consensus 109 ---------~~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg 178 (306)
T 2p4o_A 109 ---------TLLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG 178 (306)
T ss_dssp ---------EEEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET
T ss_pred ---------EEEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCC
Confidence 11111 11112233333 444444444 588999999876432 1100 0112345567888
Q ss_pred CEEEEec--CCcEEEEeCCC-CcE--EEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeecc
Q 009373 303 TTVASTS--GSDVYIWDTNS-GCL--LTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWI 377 (536)
Q Consensus 303 ~~l~~~~--d~~i~i~d~~~-~~~--~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~ 377 (536)
..++.+. .+.|..||+.. ++. ...+. .......++++++|++.++....+.|.++|.. +.. ..+....
T Consensus 179 ~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~--~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~----~~~~~~~ 251 (306)
T 2p4o_A 179 NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV--EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST----TIIAQAE 251 (306)
T ss_dssp TEEEEEETTTTEEEEEEBCTTSCBCCCEEEE--ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE----EEEECGG
T ss_pred CEEEEEeCCCCEEEEEEeCCCCCCCccEEEe--ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE----EEEeecc
Confidence 7665554 68899999875 321 12221 11345678899999887777778899999865 311 1122233
Q ss_pred CCCCCeEEEEEc---C--CeEEEEeCCC
Q 009373 378 PHTGPVNSLAFE---F--PWLVSAAGDG 400 (536)
Q Consensus 378 ~h~~~v~~l~~~---~--~~l~s~s~dg 400 (536)
......++++|. + +.|+.++..+
T Consensus 252 ~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 252 QGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp GTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred cccCCceEEEEecccCCCCEEEEECCCC
Confidence 334567899996 3 4566555443
No 260
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.36 E-value=0.0011 Score=70.50 Aligned_cols=244 Identities=9% Similarity=0.027 Sum_probs=143.5
Q ss_pred ccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCC-------CCceEEEEec-CCCEEEEEeCCCcEEEEEcccC
Q 009373 159 EAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKP-------LGCTIRAVAA-DKKLLVAGGTDGFIHCWRAVEV 230 (536)
Q Consensus 159 ~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~-------~~~~v~~~~~-~~~~l~sg~~dg~i~vwd~~~~ 230 (536)
..|.++...+++.+.+ |+.+ -+.+||..+++....... ....|.++.. ....|..|+..+-|.+++..++
T Consensus 211 ~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 288 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQN 288 (781)
T ss_dssp SSEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC
T ss_pred CceeEEEEcCCCCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCC
Confidence 5689998888777555 4445 588999877654322111 2345777774 3456777887667888987665
Q ss_pred ccceecccCcccc-cceEEeeCCccCEEEEEEe-CCEEEEEecCCeEEEEeCCCceEeEee-------e---ccccEEEE
Q 009373 231 LPHLFDISGSEKQ-NTQFRLWEHEGPITSLALD-LTRIYSGSWDMTVRVWDRALLKCLKVL-------R---HSDWVYGL 298 (536)
Q Consensus 231 ~~~~~~~~~~~~~-~~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~-------~---~~~~v~~~ 298 (536)
....+....-... .......-....|.++..| .+.|..|+.++-|..++..+....... . ....|.++
T Consensus 289 ~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i 368 (781)
T 3v9f_A 289 QFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSV 368 (781)
T ss_dssp ---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEE
T ss_pred eeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEE
Confidence 3211110000000 0000001134578898884 456888888888999998765433221 1 23568888
Q ss_pred ee--cCCEEEEecCCcEEEEeCCCCcEEEEEc--cccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceee
Q 009373 299 AP--HDTTVASTSGSDVYIWDTNSGCLLTVVN--GAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVA 374 (536)
Q Consensus 299 ~~--~~~~l~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~ 374 (536)
.. ++.+.+++.++.+..||..++....... ......|.++...++|.+ ..|+.++-+..+|..++.. ....
T Consensus 369 ~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~----~~~~ 443 (781)
T 3v9f_A 369 CDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKF----QIIE 443 (781)
T ss_dssp EECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCEE----EECC
T ss_pred EEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCcE----EEec
Confidence 73 4566555547789999987653321110 123457899988887774 4566666788898766521 1111
Q ss_pred eccCCCCCeEEEEEcC-CeEEEEeCCCcEEEEECCcc
Q 009373 375 TWIPHTGPVNSLAFEF-PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 375 ~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~ 410 (536)
........|.++..++ ..|..|+. +-|..+|..+.
T Consensus 444 ~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~ 479 (781)
T 3v9f_A 444 LEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASK 479 (781)
T ss_dssp STTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSS
T ss_pred cCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCC
Confidence 0012356789998875 67777777 56889997753
No 261
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.34 E-value=0.00042 Score=65.02 Aligned_cols=237 Identities=9% Similarity=-0.029 Sum_probs=133.7
Q ss_pred eeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeee-CC-C-----------------CceEEE--EecCCCE
Q 009373 154 LYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASS-KP-L-----------------GCTIRA--VAADKKL 212 (536)
Q Consensus 154 l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~-~~-~-----------------~~~v~~--~~~~~~~ 212 (536)
+.+.-....++++++++++++++..++.|..|+..++...... .. . ...... +.+++..
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~ 93 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ 93 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc
Confidence 3443344567889999998888889999999998765432211 00 0 012333 4453445
Q ss_pred EEEEeCCCcEEEEEcccCccceecccCcccccceEEeeC-CccCEEEEEEeC--CEEEEEec------------------
Q 009373 213 LVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWE-HEGPITSLALDL--TRIYSGSW------------------ 271 (536)
Q Consensus 213 l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~--~~l~s~s~------------------ 271 (536)
|+++...+.|..+|..++....+. ....+ .......+++++ ..++.+..
T Consensus 94 l~v~d~~~~i~~~d~~~g~~~~~~----------~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~ 163 (322)
T 2fp8_A 94 LYIVDCYYHLSVVGSEGGHATQLA----------TSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDK 163 (322)
T ss_dssp EEEEETTTEEEEECTTCEECEEEE----------SEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCC
T ss_pred EEEEECCCCEEEEeCCCCEEEEec----------ccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCC
Confidence 666655556888886544211110 00000 112456777743 34444432
Q ss_pred CCeEEEEeCCCceEeEeeeccccE--EEEeecCCEEEEe-c-CCcEEEEeCCCCc--EEEEEccccccceEEEEEeCCCC
Q 009373 272 DMTVRVWDRALLKCLKVLRHSDWV--YGLAPHDTTVAST-S-GSDVYIWDTNSGC--LLTVVNGAHVGNTKSLARSHTGD 345 (536)
Q Consensus 272 dg~i~iwd~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~-~-d~~i~i~d~~~~~--~~~~~~~~~~~~i~~l~~~~~~~ 345 (536)
++.|..+|..+++........... .++.++++.++.+ . .+.|.+|++.... ....+.. ..+ ...++++++|.
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~ 241 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGH 241 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSC
T ss_pred CceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCC
Confidence 367888998777654333211222 3455788765554 4 5889999987531 1122211 223 77899999998
Q ss_pred EEEEEcC----------CCcEEEEEcccCccccccceeeeccCC----CCCeEEEEEcCCeEEEEe-CCCcEEEEECCc
Q 009373 346 FLFTGGE----------DGAIHMYEIINDCTEANVLLVATWIPH----TGPVNSLAFEFPWLVSAA-GDGKLSLIDVRK 409 (536)
Q Consensus 346 ~l~tg~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~h----~~~v~~l~~~~~~l~s~s-~dg~i~vwd~~~ 409 (536)
+.++... .+.|..+|.. + ..+..+... ...++++++....|+.++ .++.|.++++..
T Consensus 242 l~va~~~~~~~~~~~~~~~~v~~~d~~-G------~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 242 FWVSSSEELDGNMHGRVDPKGIKFDEF-G------NILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEEEEEEETTSSTTSCEEEEEEEECTT-S------CEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC--
T ss_pred EEEEecCcccccccCCCccEEEEECCC-C------CEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEeccc
Confidence 7666544 4567788764 3 222222222 245677777666666554 577899998764
No 262
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.28 E-value=9.5e-05 Score=70.98 Aligned_cols=176 Identities=14% Similarity=0.043 Sum_probs=112.9
Q ss_pred EEEEEecCCCEEEEEeCC------CcEEEEECCCCceeeeeCCCCce---E--EEEecCCCEEEEEe-------------
Q 009373 162 LTVFVLASAKLLFTSGYD------SIVRMWHLEDGFSIASSKPLGCT---I--RAVAADKKLLVAGG------------- 217 (536)
Q Consensus 162 ~~v~~~~~~~~l~sgs~d------g~v~iwd~~~~~~~~~~~~~~~~---v--~~~~~~~~~l~sg~------------- 217 (536)
..+...|+| +++++..+ |.|.+.|.++++.+.++.....+ - .-++|+++.+++..
T Consensus 141 h~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~ 219 (462)
T 2ece_A 141 HTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKL 219 (462)
T ss_dssp EEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCT
T ss_pred cceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccch
Confidence 345678999 77777665 78999999999999888633222 2 34579999888885
Q ss_pred ------CCCcEEEEEcccCccceecccCcccccceEEeeC--CccCEEEEEE----eCCEEEEEe------cCCeEEEEe
Q 009373 218 ------TDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWE--HEGPITSLAL----DLTRIYSGS------WDMTVRVWD 279 (536)
Q Consensus 218 ------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~----~~~~l~s~s------~dg~i~iwd 279 (536)
.+.+|.+||+.+++ ...++.- .......+.| ++++++.+. .+++|.+|.
T Consensus 220 ~~~~~~~~d~V~v~D~~~~k-------------~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~ 286 (462)
T 2ece_A 220 EHLKDRYGNRIHFWDLRKRK-------------RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWF 286 (462)
T ss_dssp TTHHHHSCCEEEEEETTTTE-------------EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEE
T ss_pred hhhhhccCCEEEEEECCCCc-------------EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEE
Confidence 47899999997642 1222221 1123345545 456665555 566887765
Q ss_pred CCCceE--eEeee--c-----------------cccEE--EEeecCCEEEEec--CCcEEEEeCCC---CcEEEEEcccc
Q 009373 280 RALLKC--LKVLR--H-----------------SDWVY--GLAPHDTTVASTS--GSDVYIWDTNS---GCLLTVVNGAH 331 (536)
Q Consensus 280 ~~~~~~--~~~~~--~-----------------~~~v~--~~~~~~~~l~~~~--d~~i~i~d~~~---~~~~~~~~~~~ 331 (536)
...++. .+.+. . ..... .+++++++|.++. .+.|.+||+.. .+.+..+..+-
T Consensus 287 ~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG 366 (462)
T 2ece_A 287 YEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGG 366 (462)
T ss_dssp EETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBT
T ss_pred ecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCC
Confidence 544321 11111 0 11222 3559999998887 68999999863 35555554331
Q ss_pred c-------------cceEEEEEeCCCCEEEEEc
Q 009373 332 V-------------GNTKSLARSHTGDFLFTGG 351 (536)
Q Consensus 332 ~-------------~~i~~l~~~~~~~~l~tg~ 351 (536)
. +....+.++|+|++|+++.
T Consensus 367 ~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 367 IFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 0 1368899999999999887
No 263
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.20 E-value=0.003 Score=57.26 Aligned_cols=209 Identities=8% Similarity=0.050 Sum_probs=119.8
Q ss_pred ccEEEEEEecCCCEE-EEEeCCCcEEEEECCCCceeeeeCC--CCceEEEEecCCCEEE-EEeCCCcEEEEEcccCccce
Q 009373 159 EAVLTVFVLASAKLL-FTSGYDSIVRMWHLEDGFSIASSKP--LGCTIRAVAADKKLLV-AGGTDGFIHCWRAVEVLPHL 234 (536)
Q Consensus 159 ~~V~~v~~~~~~~~l-~sgs~dg~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~l~-sg~~dg~i~vwd~~~~~~~~ 234 (536)
..+..+++++++..| ++-..++.|..+++.++........ ....-.++.+++..|+ +-...+.|.++++.....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-- 113 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-- 113 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE--
Confidence 457799999966544 4555678999999976654333322 2233455666655444 445567899988754311
Q ss_pred ecccCcccccceEEeeCCccCEEEEEEe--CCEEEEEec---CCeEEEEeCCCceEeEeee--ccccEEEEe--ecCCEE
Q 009373 235 FDISGSEKQNTQFRLWEHEGPITSLALD--LTRIYSGSW---DMTVRVWDRALLKCLKVLR--HSDWVYGLA--PHDTTV 305 (536)
Q Consensus 235 ~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~---dg~i~iwd~~~~~~~~~~~--~~~~v~~~~--~~~~~l 305 (536)
.............++++ ++.|+.+.. .+.|..+++.... ...+. .......++ +++..|
T Consensus 114 -----------~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~l 181 (267)
T 1npe_A 114 -----------RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQL 181 (267)
T ss_dssp -----------EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEE
T ss_pred -----------EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEE
Confidence 11111112456788885 466666554 3688888875432 22222 122344444 656555
Q ss_pred EEec--CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCC-CC
Q 009373 306 ASTS--GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHT-GP 382 (536)
Q Consensus 306 ~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~-~~ 382 (536)
+.+. .+.|.++|+........+. .......++.. .+.++++....+.|.++|..++ ..+..+.... ..
T Consensus 182 yv~d~~~~~I~~~~~~g~~~~~~~~--~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g------~~~~~i~~g~~~~ 252 (267)
T 1npe_A 182 CWVDAGTHRAECLNPAQPGRRKVLE--GLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAIS------KEMDTFHPHKQTR 252 (267)
T ss_dssp EEEETTTTEEEEEETTEEEEEEEEE--CCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTT------EEEEEECCSSCCC
T ss_pred EEEECCCCEEEEEecCCCceEEEec--CCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCC------CceEEEccccccc
Confidence 4444 5889999997654333332 22344567665 4445555556789999998877 3444443222 23
Q ss_pred eEEEEEcC
Q 009373 383 VNSLAFEF 390 (536)
Q Consensus 383 v~~l~~~~ 390 (536)
...+++.|
T Consensus 253 p~gi~~~~ 260 (267)
T 1npe_A 253 LYGITIAL 260 (267)
T ss_dssp CCCEEEEC
T ss_pred cceeeecC
Confidence 55666654
No 264
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.16 E-value=0.00022 Score=70.97 Aligned_cols=182 Identities=11% Similarity=0.001 Sum_probs=113.5
Q ss_pred cCCCEEEEEeC-CCcEEEEECCCCceee--eeCC-CCceEEEE-e-cCCCEEEEEe------------------CCCcEE
Q 009373 168 ASAKLLFTSGY-DSIVRMWHLEDGFSIA--SSKP-LGCTIRAV-A-ADKKLLVAGG------------------TDGFIH 223 (536)
Q Consensus 168 ~~~~~l~sgs~-dg~v~iwd~~~~~~~~--~~~~-~~~~v~~~-~-~~~~~l~sg~------------------~dg~i~ 223 (536)
+||++|+.... ++.|.+.|+.+.++.. .+.. ....-.++ . |+++++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 37787776665 5679999999999877 4432 33333454 4 8999998884 345788
Q ss_pred EEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecC-------------------------------
Q 009373 224 CWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWD------------------------------- 272 (536)
Q Consensus 224 vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~d------------------------------- 272 (536)
+.|.++.+... .+ ...+ .-.-..+..+++++++.+.+
T Consensus 179 vID~~t~~v~~-qI----------~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~ 246 (595)
T 1fwx_A 179 AVDADKWEVAW-QV----------LVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA 246 (595)
T ss_dssp EEETTTTEEEE-EE----------EESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH
T ss_pred EEECCCCeEEE-EE----------EeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc
Confidence 88887643111 00 0001 10011111133333333322
Q ss_pred -------CeEEEEeCCC--ceE-eEeeec--cccEEEEeecCCEEEEec--CCcEEEEeCCCCc------------EEEE
Q 009373 273 -------MTVRVWDRAL--LKC-LKVLRH--SDWVYGLAPHDTTVASTS--GSDVYIWDTNSGC------------LLTV 326 (536)
Q Consensus 273 -------g~i~iwd~~~--~~~-~~~~~~--~~~v~~~~~~~~~l~~~~--d~~i~i~d~~~~~------------~~~~ 326 (536)
+.|.+.|..+ ++. +..+.. ...-..++|+|+++++++ +.+|.++|+.+.+ ....
T Consensus 247 ~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~ 326 (595)
T 1fwx_A 247 AGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE 326 (595)
T ss_dssp HTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEEC
T ss_pred CCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEE
Confidence 3478888877 444 445542 223344569999988887 6889999999653 2333
Q ss_pred EccccccceEEEEEeCCCCEEEEEcCCCcEEEEEccc
Q 009373 327 VNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIIN 363 (536)
Q Consensus 327 ~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~ 363 (536)
+. -......++|+|+|...++.-.|+.|.+||+..
T Consensus 327 v~--vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 327 PE--LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CB--CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred cC--CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 32 345688999999995555677899999999977
No 265
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.10 E-value=0.0026 Score=59.50 Aligned_cols=241 Identities=10% Similarity=0.021 Sum_probs=129.3
Q ss_pred EEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccc--cc--e--EEeeCCccCEEEEEEe--CCEEEEEecCCeE
Q 009373 204 RAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQ--NT--Q--FRLWEHEGPITSLALD--LTRIYSGSWDMTV 275 (536)
Q Consensus 204 ~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~--~~--~--~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i 275 (536)
.++.+++++++++..++.|..|+..++....+........ .. . .........+..++++ .+.|+.+...+.|
T Consensus 24 i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i 103 (322)
T 2fp8_A 24 FTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHL 103 (322)
T ss_dssp EECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEE
T ss_pred EEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCE
Confidence 3455778878888899999999876543211110000000 00 0 0000012357788885 4678888777778
Q ss_pred EEEeCCCceEeEeee--c---cccEEEEe--e-cCCEEEEecC------------------CcEEEEeCCCCcEEEEEcc
Q 009373 276 RVWDRALLKCLKVLR--H---SDWVYGLA--P-HDTTVASTSG------------------SDVYIWDTNSGCLLTVVNG 329 (536)
Q Consensus 276 ~iwd~~~~~~~~~~~--~---~~~v~~~~--~-~~~~l~~~~d------------------~~i~i~d~~~~~~~~~~~~ 329 (536)
..+|..+++...... . ......+. + +++++++... +.|..||..+++......
T Consensus 104 ~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~- 182 (322)
T 2fp8_A 104 SVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK- 182 (322)
T ss_dssp EEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-
T ss_pred EEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-
Confidence 899987654322111 1 12344554 6 7777776532 568889987776433221
Q ss_pred ccccceEEEEEeCCCCEEEEE-cCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEeC--------
Q 009373 330 AHVGNTKSLARSHTGDFLFTG-GEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAAG-------- 398 (536)
Q Consensus 330 ~~~~~i~~l~~~~~~~~l~tg-~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~-------- 398 (536)
.......++++|+++.|+.+ +..+.|.+|++..... .....+..+ .+ ...+++++ .+.++...
T Consensus 183 -~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~-~~~~~~~~~---~g-P~gi~~d~~G~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 183 -ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK-GTAEVLVKI---PN-PGNIKRNADGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp -EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT-TCEEEEEEC---SS-EEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred -CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC-CccceEEeC---CC-CCCeEECCCCCEEEEecCcccccccC
Confidence 22345679999999866554 5678999999875321 111122222 22 67888875 44444333
Q ss_pred --CCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccc-cccEEEEEe-cCCEEEEecCCCeEEEEeCCc
Q 009373 399 --DGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGF-ECNLLSVDI-GADRIVCGGEEGIVRIWNFSQ 468 (536)
Q Consensus 399 --dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~-~~~~l~sg~~Dg~i~vW~~~~ 468 (536)
.+.|..+|... . ....+.. . .+. -..+.++.+ ++.++++....+.|..+++..
T Consensus 257 ~~~~~v~~~d~~G-~---------~~~~~~~-~------~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 257 RVDPKGIKFDEFG-N---------ILEVIPL-P------PPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp CEEEEEEEECTTS-C---------EEEEEEC-C------TTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC--
T ss_pred CCccEEEEECCCC-C---------EEEEEEC-C------CCCccccceEEEEeCCEEEEeecCCCceEEEeccc
Confidence 35677777532 1 1111100 0 000 011222222 444666666788899998764
No 266
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.08 E-value=8.8e-05 Score=73.80 Aligned_cols=245 Identities=14% Similarity=0.077 Sum_probs=138.1
Q ss_pred eCCEEEEEe-cCCeEEEEeCCCceEeEeee--ccccEEEEe----ecCCEEEEec-------------------CCcEEE
Q 009373 262 DLTRIYSGS-WDMTVRVWDRALLKCLKVLR--HSDWVYGLA----PHDTTVASTS-------------------GSDVYI 315 (536)
Q Consensus 262 ~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~----~~~~~l~~~~-------------------d~~i~i 315 (536)
|+++++... .++.|.+.|+.+.++...+. .......+. |++.++++++ ++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 667766655 45679999999999888554 333444544 7889888883 357999
Q ss_pred EeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCC---------------cEEEEEcccCccc---------ccc-
Q 009373 316 WDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDG---------------AIHMYEIINDCTE---------ANV- 370 (536)
Q Consensus 316 ~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg---------------~i~iwd~~~~~~~---------~~~- 370 (536)
.|..+.+...++.-+ +....++++|+|+++++.+.+. .|.++|....... ..+
T Consensus 180 ID~~t~~v~~qI~Vg--g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 180 VDADKWEVAWQVLVS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EETTTTEEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EECCCCeEEEEEEeC--CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 999999988887532 2456788999999999888653 2444443221000 000
Q ss_pred ---------ce-eeeccCCCCCeEEEEEcC--CeEEEE-eCCCcEEEEECCcccccC--CCCCCCceeeEEeeCCCeeee
Q 009373 371 ---------LL-VATWIPHTGPVNSLAFEF--PWLVSA-AGDGKLSLIDVRKLLRSG--RPTSGKRVSRVIEVEPPQRML 435 (536)
Q Consensus 371 ---------~~-~~~~~~h~~~v~~l~~~~--~~l~s~-s~dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 435 (536)
.. +..+. -.....++.++| .+++++ ..+.+|.++|+.+..... .......+ .. ...
T Consensus 258 VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v--~~------~v~ 328 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAV--VA------EPE 328 (595)
T ss_dssp EEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGE--EE------CCB
T ss_pred EEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccce--EE------EcC
Confidence 01 11111 112345677776 455544 468899999999753210 00000000 00 011
Q ss_pred ccccccEEEEEecCCEEEEecCCCeEEEEeCCchhhHHHH---HHhhhcccc-hh-HHHhhhhccccccCCCCcceeEee
Q 009373 436 HGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFEIERR---ARALRGIRL-EN-RMRRRKLQTEMSSKGGRTDQCSVA 510 (536)
Q Consensus 436 ~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~~~~---~~~~~~~~~-~~-~~~~~~~~~~~~~~g~~~~~~~~~ 510 (536)
-|....-+.+++++...++.-.|+.|.+||+.++.....- ......+.. +. ..........++|||+.+.+..--
T Consensus 329 vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~ 408 (595)
T 1fwx_A 329 LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKF 408 (595)
T ss_dssp CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCC
Confidence 1222233445555545677888999999998764221100 000000000 00 011122456889999999887666
Q ss_pred cccCCcC
Q 009373 511 AKKNPMN 517 (536)
Q Consensus 511 ~~~~~~~ 517 (536)
++.+.++
T Consensus 409 skdr~~~ 415 (595)
T 1fwx_A 409 SKDRFLN 415 (595)
T ss_dssp CTTSSCC
T ss_pred Ccccccc
Confidence 6666543
No 267
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.00 E-value=0.0046 Score=55.96 Aligned_cols=174 Identities=7% Similarity=-0.047 Sum_probs=106.5
Q ss_pred ccEEEEEEecCCC-EEEEEeCCCcEEEEECCCCceeeeeC-C-CCceEEEEecCCCEEEEEeC---CCcEEEEEcccCcc
Q 009373 159 EAVLTVFVLASAK-LLFTSGYDSIVRMWHLEDGFSIASSK-P-LGCTIRAVAADKKLLVAGGT---DGFIHCWRAVEVLP 232 (536)
Q Consensus 159 ~~V~~v~~~~~~~-~l~sgs~dg~v~iwd~~~~~~~~~~~-~-~~~~v~~~~~~~~~l~sg~~---dg~i~vwd~~~~~~ 232 (536)
.....+++++++. ++++-...+.|.+++++......... + ....-.++.+++..|+.+.. .+.|..+++.....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence 5678999999755 44455567899999987543222222 1 22233466676666555543 36788887643210
Q ss_pred ceecccCcccccceEEeeCCccCEEEEEEe--CCEEEEE-ecCCeEEEEeCCCceEeEeeeccccEEEEeecCCEEEEec
Q 009373 233 HLFDISGSEKQNTQFRLWEHEGPITSLALD--LTRIYSG-SWDMTVRVWDRALLKCLKVLRHSDWVYGLAPHDTTVASTS 309 (536)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 309 (536)
.............++++ ++.|+.+ ...+.|.++|.........+........++.++..++.+.
T Consensus 159 -------------~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~ 225 (267)
T 1npe_A 159 -------------RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTD 225 (267)
T ss_dssp -------------EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEE
T ss_pred -------------EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEeCCEEEEEE
Confidence 01111223456788884 4566544 4568999999976544433333334456665566555554
Q ss_pred --CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCC
Q 009373 310 --GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGD 345 (536)
Q Consensus 310 --d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 345 (536)
++.|..+|..+++.+..+..+.......+++.|++.
T Consensus 226 ~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 226 WKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 588999999999998888643333467788887764
No 268
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.96 E-value=0.012 Score=55.01 Aligned_cols=274 Identities=12% Similarity=-0.004 Sum_probs=137.0
Q ss_pred cccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeC----CCCceEEEEecCCCEEEEEeCCCcEEEEEcccCccc
Q 009373 158 TEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSK----PLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPH 233 (536)
Q Consensus 158 ~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 233 (536)
...+.+|.|.+.+..+++ +.+|.| +...+.|+.-.... .....+.++..+++.++.++.+|.|.. ....+.
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~-- 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQ-- 109 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEE-ESSTTS--
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEE-ECCCCC--
Confidence 346899999877777774 456765 33444454333221 123456666544455555666675533 222121
Q ss_pred eecccCcccccceEEeeCCccCEEEEEE-eCCEEEEEecCCeEEEEeCCCceEeEeee--ccccEEEEe--ecCCEEEEe
Q 009373 234 LFDISGSEKQNTQFRLWEHEGPITSLAL-DLTRIYSGSWDMTVRVWDRALLKCLKVLR--HSDWVYGLA--PHDTTVAST 308 (536)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~--~~~~~l~~~ 308 (536)
..........+.+.+..+.+ +++.++.++.+|.|..- ...++.-.... ....+..+. +++.+++.+
T Consensus 110 --------tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g 180 (327)
T 2xbg_A 110 --------SWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVS 180 (327)
T ss_dssp --------SCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEE
T ss_pred --------CceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEE
Confidence 11111111112344667776 55556556666655321 12233222222 344566665 677788777
Q ss_pred cCCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeec-cCCCCCeEEEE
Q 009373 309 SGSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATW-IPHTGPVNSLA 387 (536)
Q Consensus 309 ~d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~-~~h~~~v~~l~ 387 (536)
.++.+..-+-..+..-..+.......+..+.+.+++..+++ +.+|.+++.+...+. ....+..- ..+...+.++.
T Consensus 181 ~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~---tW~~~~~~~~~~~~~~~~v~ 256 (327)
T 2xbg_A 181 SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSE---NWGELLSPLRRNSVGFLDLA 256 (327)
T ss_dssp TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEE---EECCCBCTTSSCCSCEEEEE
T ss_pred CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCC---eeEeccCCcccCCcceEEEE
Confidence 77666554322133222222345567889999998876554 467877776422221 11111110 11234588888
Q ss_pred EcC-CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEe-cCCEEEEecCCCeEEEEe
Q 009373 388 FEF-PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDI-GADRIVCGGEEGIVRIWN 465 (536)
Q Consensus 388 ~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~sg~~Dg~i~vW~ 465 (536)
+.+ ..++.++.+|.|. +....+ ..+... .. .......+.++.+ ++..++.++.+|.|.-++
T Consensus 257 ~~~~~~~~~~g~~g~i~-~S~DgG-~tW~~~-----------~~----~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 257 YRTPNEVWLAGGAGALL-CSQDGG-QTWQQD-----------VD----VKKVPSNFYKILFFSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp ESSSSCEEEEESTTCEE-EESSTT-SSCEEC-----------GG----GTTSSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred ecCCCEEEEEeCCCeEE-EeCCCC-cccEEc-----------Cc----cCCCCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence 864 5566666678773 333222 111100 00 0001112233333 355777888899887766
Q ss_pred C
Q 009373 466 F 466 (536)
Q Consensus 466 ~ 466 (536)
-
T Consensus 320 ~ 320 (327)
T 2xbg_A 320 T 320 (327)
T ss_dssp C
T ss_pred C
Confidence 4
No 269
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.95 E-value=0.0041 Score=57.63 Aligned_cols=223 Identities=11% Similarity=0.034 Sum_probs=119.2
Q ss_pred CEEEEEeC--CCcEEEEECCCCcee--eeeCCCCceEEEEecCCCEEEEEeCC----CcEEEEEcccCccceecccCccc
Q 009373 171 KLLFTSGY--DSIVRMWHLEDGFSI--ASSKPLGCTIRAVAADKKLLVAGGTD----GFIHCWRAVEVLPHLFDISGSEK 242 (536)
Q Consensus 171 ~~l~sgs~--dg~v~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~l~sg~~d----g~i~vwd~~~~~~~~~~~~~~~~ 242 (536)
.+++.|+. ...+.+||..+++-. ..+........+...++.+++.|+.+ ..+.+||..+..-.
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~--------- 83 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWY--------- 83 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEE---------
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEE---------
Confidence 35555654 357888998876422 22222222222333577788888765 66888887765311
Q ss_pred ccceEEeeCCccCEEEEEEeCCEEEEEecC------CeEEEEeCCCceEeEeee--c-cccEEEEeecCCEEEEec----
Q 009373 243 QNTQFRLWEHEGPITSLALDLTRIYSGSWD------MTVRVWDRALLKCLKVLR--H-SDWVYGLAPHDTTVASTS---- 309 (536)
Q Consensus 243 ~~~~~~~~~h~~~v~~l~~~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~--~-~~~v~~~~~~~~~l~~~~---- 309 (536)
....+......-....+++..++.|+.+ ..+.+||..+.+-...-. . ...-.++..++++++.|+
T Consensus 84 --~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 161 (306)
T 3ii7_A 84 --SKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGN 161 (306)
T ss_dssp --EEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESC
T ss_pred --ECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCC
Confidence 1111111111222334466777777765 468899988765433221 1 111122335677766665
Q ss_pred ------CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCC-----CcEEEEEcccCccccccceeeeccC
Q 009373 310 ------GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGED-----GAIHMYEIINDCTEANVLLVATWIP 378 (536)
Q Consensus 310 ------d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~ 378 (536)
-..+.+||+.+.+-...-.......-.++... ++.+++.|+.+ ..+.+||+.+.. ...+..+..
T Consensus 162 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~----W~~~~~~p~ 236 (306)
T 3ii7_A 162 NVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNE----WKMVSPMPW 236 (306)
T ss_dssp TTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTE----EEECCCCSC
T ss_pred CCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCc----EEECCCCCC
Confidence 23488999988754433211111111122222 56777777654 358889987752 122222222
Q ss_pred CCCCeEEEEEcCCeEEEEeCC-----CcEEEEECCc
Q 009373 379 HTGPVNSLAFEFPWLVSAAGD-----GKLSLIDVRK 409 (536)
Q Consensus 379 h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~ 409 (536)
......++.+++..++.|+.+ ..+.+||+.+
T Consensus 237 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 237 KGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp CBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred CccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 233334455566777777754 4678888876
No 270
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.84 E-value=0.0073 Score=55.74 Aligned_cols=227 Identities=15% Similarity=0.109 Sum_probs=117.3
Q ss_pred CCEEEEEe-CC-----CcEEEEECCCCceee--eeCCCCceEEEEecCCCEEEEEeCC-----CcEEEEEcccCccceec
Q 009373 170 AKLLFTSG-YD-----SIVRMWHLEDGFSIA--SSKPLGCTIRAVAADKKLLVAGGTD-----GFIHCWRAVEVLPHLFD 236 (536)
Q Consensus 170 ~~~l~sgs-~d-----g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~ 236 (536)
+.+++.|+ .+ ..+.+||+.+.+-.. .+........+...++.+++.|+.+ ..+.+||..+.....
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~-- 92 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV-- 92 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCC--
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCe--
Confidence 44555565 22 468889988764222 2222122222334567788888765 458888887653000
Q ss_pred ccCcccccceEEeeCCccCEEEEEEeCCEEEEEecC-----CeEEEEeCCCceEeEeee--c-cccEEEEeecCCEEEEe
Q 009373 237 ISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWD-----MTVRVWDRALLKCLKVLR--H-SDWVYGLAPHDTTVAST 308 (536)
Q Consensus 237 ~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~--~-~~~v~~~~~~~~~l~~~ 308 (536)
......+......-..+..++..++.|+.+ ..+.+||+.+.+-...-. . ...-.++..++++++.|
T Consensus 93 ------W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 166 (301)
T 2vpj_A 93 ------WYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLG 166 (301)
T ss_dssp ------CEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEEC
T ss_pred ------eEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEEC
Confidence 001111111111222333466667777654 368889988765433222 1 11112233567777766
Q ss_pred c-C-----CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCC-----CcEEEEEcccCccccccceeeecc
Q 009373 309 S-G-----SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGED-----GAIHMYEIINDCTEANVLLVATWI 377 (536)
Q Consensus 309 ~-d-----~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~ 377 (536)
+ + ..+.+||+.+.+-...-.......-.++.. -++.+++.|+.+ ..+.+||+.+..- ..+..+.
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W----~~~~~~p 241 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSW----TTVTSMT 241 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEE----EEECCCS
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcE----EECCCCC
Confidence 5 3 459999998876543321111111112222 256777777764 4689999877621 2222222
Q ss_pred CCCCCeEEEEEcCCeEEEEeCC-----CcEEEEECCc
Q 009373 378 PHTGPVNSLAFEFPWLVSAAGD-----GKLSLIDVRK 409 (536)
Q Consensus 378 ~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~ 409 (536)
.......++.+++..++.|+.+ ..|.+||+++
T Consensus 242 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 242 TPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp SCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred CcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 2222233444556666777655 3577888765
No 271
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.83 E-value=0.0042 Score=57.39 Aligned_cols=228 Identities=12% Similarity=0.067 Sum_probs=115.9
Q ss_pred CCCEEEEEe-CC-----CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecC-----CeEEE
Q 009373 209 DKKLLVAGG-TD-----GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWD-----MTVRV 277 (536)
Q Consensus 209 ~~~~l~sg~-~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~d-----g~i~i 277 (536)
++.+++.|+ .+ ..+.+||+.+..-... ..+......-..+..++..++.|+.+ ..+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~-----------~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~ 82 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFL-----------PSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVEC 82 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEEC-----------CCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEE
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeC-----------CCCChhhccccEEEECCEEEEEcCCCCCccCceEEE
Confidence 445666666 33 3678888766532111 01111111222333466677777765 46889
Q ss_pred EeCCCce---EeE--eeec-cccEEEEeecCCEEEEec-C-----CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCC
Q 009373 278 WDRALLK---CLK--VLRH-SDWVYGLAPHDTTVASTS-G-----SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGD 345 (536)
Q Consensus 278 wd~~~~~---~~~--~~~~-~~~v~~~~~~~~~l~~~~-d-----~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 345 (536)
||..+.+ -.. .+.. ...-..+..++.+++.|+ + ..+.+||+.+.+....-.......-.+++. -++.
T Consensus 83 ~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~ 161 (301)
T 2vpj_A 83 LDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGV 161 (301)
T ss_dssp EETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTE
T ss_pred EECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCE
Confidence 9987765 222 2221 111222335677777765 2 358999998876443221111111112222 2567
Q ss_pred EEEEEcCC-----CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEEeCC-----CcEEEEECCcccccCC
Q 009373 346 FLFTGGED-----GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAAGD-----GKLSLIDVRKLLRSGR 415 (536)
Q Consensus 346 ~l~tg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~~~~~~~ 415 (536)
+++.|+.+ ..+.+||+.+..- ..+..+......-.++.+++..++.|+.+ ..+.+||+.+..
T Consensus 162 iyv~GG~~~~~~~~~~~~~d~~~~~W----~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~---- 233 (301)
T 2vpj_A 162 IYCLGGYDGLNILNSVEKYDPHTGHW----TNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS---- 233 (301)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTTEE----EEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE----
T ss_pred EEEECCCCCCcccceEEEEeCCCCcE----EeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc----
Confidence 77777754 4588999877621 22222222222233444556667777664 468889987631
Q ss_pred CCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCC-----CeEEEEeCCch
Q 009373 416 PTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEE-----GIVRIWNFSQA 469 (536)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~D-----g~i~vW~~~~~ 469 (536)
+............|. ....++..++.||.+ ..|.+||+.+.
T Consensus 234 ---------W~~~~~~p~~r~~~~----~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 234 ---------WTTVTSMTTPRCYVG----ATVLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp ---------EEEECCCSSCCBSCE----EEEETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred ---------EEECCCCCCccccee----EEEECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 111111111112222 233456677777765 35778888764
No 272
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.81 E-value=0.0064 Score=56.20 Aligned_cols=225 Identities=12% Similarity=0.089 Sum_probs=115.4
Q ss_pred CCEEEEEeCC----CcEEEEECCCCceee--eeCCCCceEEEEecCCCEEEEEeCCC-----cEEEEEcccCccceeccc
Q 009373 170 AKLLFTSGYD----SIVRMWHLEDGFSIA--SSKPLGCTIRAVAADKKLLVAGGTDG-----FIHCWRAVEVLPHLFDIS 238 (536)
Q Consensus 170 ~~~l~sgs~d----g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~ 238 (536)
+.+++.|+.+ ..+..||+.+.+-.. .+............++.+++.|+.++ .+.+||..+..-...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~--- 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV--- 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEE---
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeC---
Confidence 3445555543 357888887764222 12211111122335777888887653 577888766532111
Q ss_pred CcccccceEEeeCCccCEEEEEEeCCEEEEEecCC-----eEEEEeCCCceEeEeee--c-cccEEEEeecCCEEEEec-
Q 009373 239 GSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDM-----TVRVWDRALLKCLKVLR--H-SDWVYGLAPHDTTVASTS- 309 (536)
Q Consensus 239 ~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~--~-~~~v~~~~~~~~~l~~~~- 309 (536)
..+......-....+++..++.|+.++ .+.+||+.+.+-...-. . .....++..++++++.|+
T Consensus 93 --------~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 164 (302)
T 2xn4_A 93 --------ANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGY 164 (302)
T ss_dssp --------CCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCE
T ss_pred --------CCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCC
Confidence 111111112223334677777777654 57788887765433222 1 111122335667766665
Q ss_pred C-------CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCC-----CcEEEEEcccCccccccceeeecc
Q 009373 310 G-------SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGED-----GAIHMYEIINDCTEANVLLVATWI 377 (536)
Q Consensus 310 d-------~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~ 377 (536)
+ ..+.+||+.+++-...-.......-.+++.. ++.+++.|+.+ ..+.+||+.+..- ..+..+.
T Consensus 165 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W----~~~~~~~ 239 (302)
T 2xn4_A 165 DVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAW----RQVADMN 239 (302)
T ss_dssp ETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEE----EEECCCS
T ss_pred CCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCE----eeCCCCC
Confidence 2 3488999988764433211111111122222 56777777764 3688999876521 2222222
Q ss_pred CCCCCeEEEEEcCCeEEEEeCCC-----cEEEEECCcc
Q 009373 378 PHTGPVNSLAFEFPWLVSAAGDG-----KLSLIDVRKL 410 (536)
Q Consensus 378 ~h~~~v~~l~~~~~~l~s~s~dg-----~i~vwd~~~~ 410 (536)
.....-..+.+++..++.|+.++ .+.+||+.+.
T Consensus 240 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 240 MCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 11222234445666777777653 4888988763
No 273
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.74 E-value=0.029 Score=52.46 Aligned_cols=227 Identities=13% Similarity=0.026 Sum_probs=118.0
Q ss_pred cccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeC---CCCceEEEEe--cCCCEEEEEeCCCcEEEEEcccCcc
Q 009373 158 TEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSK---PLGCTIRAVA--ADKKLLVAGGTDGFIHCWRAVEVLP 232 (536)
Q Consensus 158 ~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~---~~~~~v~~~~--~~~~~l~sg~~dg~i~vwd~~~~~~ 232 (536)
...+.+|.+.+ +..++ ++.++.|.. ..+.|+.-.... .+...+..+. .++..+++ +.+|.|. ....+-
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~g~v~--~S~DgG- 151 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMI-TNVGAIY--RTKDSG- 151 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEE-ETTCCEE--EESSTT-
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEE-eCCccEE--EEcCCC-
Confidence 44688999986 44444 455665443 334454433322 1223344444 44444444 4456442 221110
Q ss_pred ceecccCcccccceEEeeCCccCEEEEEE-eCCEEEEEecCCeEEE-EeC--CCceEeEeeeccccEEEEe--ecCCEEE
Q 009373 233 HLFDISGSEKQNTQFRLWEHEGPITSLAL-DLTRIYSGSWDMTVRV-WDR--ALLKCLKVLRHSDWVYGLA--PHDTTVA 306 (536)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~dg~i~i-wd~--~~~~~~~~~~~~~~v~~~~--~~~~~l~ 306 (536)
... .....++...+..+.+ .++.++..+.+|.+.. +|- .+.+.+. ......+..+. +++.+++
T Consensus 152 --------~tW--~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~-~~~~~~~~~~~~~~~g~~~~ 220 (327)
T 2xbg_A 152 --------KNW--QALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN-RTTSRRLHNMGFTPDGRLWM 220 (327)
T ss_dssp --------SSE--EEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE-CCSSSCEEEEEECTTSCEEE
T ss_pred --------CCC--EEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC-CCCCCccceeEECCCCCEEE
Confidence 111 1112234557888888 2334444445555444 342 2333321 12334555554 6777777
Q ss_pred EecCCcEEEEeCCCCcEEEEEccc---cccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCe
Q 009373 307 STSGSDVYIWDTNSGCLLTVVNGA---HVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPV 383 (536)
Q Consensus 307 ~~~d~~i~i~d~~~~~~~~~~~~~---~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v 383 (536)
++.+|.+++.+...++....+..+ ....+.++.+.+++.+++++. +|.+ ++....+. ....+.........+
T Consensus 221 ~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~---tW~~~~~~~~~~~~~ 295 (327)
T 2xbg_A 221 IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQ---TWQQDVDVKKVPSNF 295 (327)
T ss_dssp EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTS---SCEECGGGTTSSSCC
T ss_pred EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCc---ccEEcCccCCCCCCe
Confidence 777888777653334433333212 223588999998877766654 6766 34444341 122222112234567
Q ss_pred EEEEEc-CCeEEEEeCCCcEEEEEC
Q 009373 384 NSLAFE-FPWLVSAAGDGKLSLIDV 407 (536)
Q Consensus 384 ~~l~~~-~~~l~s~s~dg~i~vwd~ 407 (536)
.++.|. +..+++++.+|.|.-++-
T Consensus 296 ~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 296 YKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp CEEEEEETTEEEEECSTTEEEEECC
T ss_pred EEEEEECCCceEEEcCCceEEEEcC
Confidence 888884 577888899998877664
No 274
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.74 E-value=0.018 Score=52.45 Aligned_cols=188 Identities=16% Similarity=0.205 Sum_probs=121.9
Q ss_pred CCeEEEEeCCCceEeEeeeccccEEEEe-ecCCEEEEecCCcEEEEeCCCC-cEEEEEcccc----ccceEEEEEeCCCC
Q 009373 272 DMTVRVWDRALLKCLKVLRHSDWVYGLA-PHDTTVASTSGSDVYIWDTNSG-CLLTVVNGAH----VGNTKSLARSHTGD 345 (536)
Q Consensus 272 dg~i~iwd~~~~~~~~~~~~~~~v~~~~-~~~~~l~~~~d~~i~i~d~~~~-~~~~~~~~~~----~~~i~~l~~~~~~~ 345 (536)
..++.++|+++.+.++.+.....|.-.. -+.+.|+..++..|+.|++... .+...+.. | ...|..-..+++.+
T Consensus 86 g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~taVyHWs~~~~s~P~kvFdR-~~~L~~~QIInY~~d~~~k 164 (365)
T 2xzh_A 86 GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDR-HSSLAGCQIINYRTDAKQK 164 (365)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEESSEEEEEESSTTCCCEEEEEC-CGGGTTCEEEEEEECTTSC
T ss_pred CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEcCCcEEEEcccCCCCCceeeec-chhcccceEEEEEECCCCC
Confidence 6889999999999999998777888777 6788999999999999999754 45555532 3 34677778889999
Q ss_pred EEEEEcC-------CCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC-----CeEEEEeC---CCcEEEEECCcc
Q 009373 346 FLFTGGE-------DGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF-----PWLVSAAG---DGKLSLIDVRKL 410 (536)
Q Consensus 346 ~l~tg~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~s~---dg~i~vwd~~~~ 410 (536)
+++..+- .|.+.+|..... ..+.+.||.+.-..+...+ ..++.+.. .++++|-++...
T Consensus 165 W~~l~GI~~~~~~v~G~mQLYS~er~-------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~ 237 (365)
T 2xzh_A 165 WLLLTGISAQQNRVVGAMQLYSVDRK-------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 237 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEEEETTTT-------EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSC
T ss_pred EEEEEeEeccCCccceeEEEEeeccc-------ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCC
Confidence 8765442 367888987665 4566778877666666543 23333333 268999998543
Q ss_pred cccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--EEEEecCCCeEEEEeCCchhhHHH
Q 009373 411 LRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RIVCGGEEGIVRIWNFSQAFEIER 474 (536)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~sg~~Dg~i~vW~~~~~~~~~~ 474 (536)
.... ....++...+. .++ .....--.++..+.. .+..-..-|.|++||++++..+..
T Consensus 238 ~~~~-~~f~kk~vdi~--fpp----ea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 238 PTGN-QPFPKKAVDVF--FPP----EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp CTTC-CCCCCEEEEEC--CCT----TCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCCC-CCcccccceee--CCc----cccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEE
Confidence 1111 11111111111 111 011122234555554 566666789999999999987753
No 275
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.73 E-value=0.023 Score=52.52 Aligned_cols=230 Identities=12% Similarity=-0.037 Sum_probs=126.9
Q ss_pred cCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeeeccccEEEEe--ecCCEEEEecC-C--cEEEEeCCCCcEEEE
Q 009373 254 GPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLRHSDWVYGLA--PHDTTVASTSG-S--DVYIWDTNSGCLLTV 326 (536)
Q Consensus 254 ~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~d-~--~i~i~d~~~~~~~~~ 326 (536)
.....+++ +++.+++-..++.|..||.... ....+........+. ++++++++... . .|..+|..+++....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 45678888 4555555557899999998753 333444444566665 67887666542 2 477788888775433
Q ss_pred EccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccc--cceee--eccCCCCCeEEEEEcCCeEEEE-eCCCc
Q 009373 327 VNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEAN--VLLVA--TWIPHTGPVNSLAFEFPWLVSA-AGDGK 401 (536)
Q Consensus 327 ~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~--~~~~~--~~~~h~~~v~~l~~~~~~l~s~-s~dg~ 401 (536)
...........++..+++..+++-..++.|.++|...+..... ..... .....-...+.|..++.+|+.+ ...+.
T Consensus 111 ~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~ 190 (306)
T 2p4o_A 111 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKML 190 (306)
T ss_dssp EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTE
T ss_pred EeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCE
Confidence 3211222334555555555555555688899998764310000 00000 1111223455665556655554 45788
Q ss_pred EEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEEEeCCchhh--HHHHHHhh
Q 009373 402 LSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFE--IERRARAL 479 (536)
Q Consensus 402 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~--~~~~~~~~ 479 (536)
|.++++...... .. ...+. ......-++++.+++++++....+.|.+++.. +.. +.....
T Consensus 191 I~~~~~~~~g~~---~~---~~~~~---------~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~-- 252 (306)
T 2p4o_A 191 LLRIPVDSTDKP---GE---PEIFV---------EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQ-- 252 (306)
T ss_dssp EEEEEBCTTSCB---CC---CEEEE---------ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGG--
T ss_pred EEEEEeCCCCCC---Cc---cEEEe---------ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeeccc--
Confidence 999998641000 00 00000 01112234566677777777777889999865 432 111100
Q ss_pred hcccchhHHHhhhhccccc---cCCCCcceeEee
Q 009373 480 RGIRLENRMRRRKLQTEMS---SKGGRTDQCSVA 510 (536)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~ 510 (536)
.-..+.+++|. |+++.+.++...
T Consensus 253 --------~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 253 --------GVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp --------TCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred --------ccCCceEEEEecccCCCCEEEEECCC
Confidence 01345788998 888888776553
No 276
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.72 E-value=0.007 Score=55.92 Aligned_cols=188 Identities=13% Similarity=0.085 Sum_probs=97.7
Q ss_pred EEeCCEEEEEecC-----CeEEEEeCCCceEeEeee--c-cccEEEEeecCCEEEEec-C-----CcEEEEeCCCCcEEE
Q 009373 260 ALDLTRIYSGSWD-----MTVRVWDRALLKCLKVLR--H-SDWVYGLAPHDTTVASTS-G-----SDVYIWDTNSGCLLT 325 (536)
Q Consensus 260 ~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~--~-~~~v~~~~~~~~~l~~~~-d-----~~i~i~d~~~~~~~~ 325 (536)
..++..++.|+.+ ..+.+||..+.+-...-. . ...-..+..++.+++.|+ + ..+.+||+.+.+-..
T Consensus 59 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 59 YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred EECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 3466677777755 358889988765433222 1 111122335667666665 3 258899998876443
Q ss_pred EEccccccceEEEEEeCCCCEEEEEcCC-------CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEEeC
Q 009373 326 VVNGAHVGNTKSLARSHTGDFLFTGGED-------GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAAG 398 (536)
Q Consensus 326 ~~~~~~~~~i~~l~~~~~~~~l~tg~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~ 398 (536)
.-.......-.+++. -++.+++.|+.+ ..+.+||+.+..- ..+..+.........+.++..+++.|+.
T Consensus 139 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W----~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 213 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEW----TYIAEMSTRRSGAGVGVLNNLLYAVGGH 213 (302)
T ss_dssp ECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEE----EEECCCSSCCBSCEEEEETTEEEEECCB
T ss_pred cCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcE----EECCCCccccccccEEEECCEEEEECCC
Confidence 321111111112222 256677776643 3488899876521 2222222222223344556667777766
Q ss_pred C-----CcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCC-----eEEEEeCCc
Q 009373 399 D-----GKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEG-----IVRIWNFSQ 468 (536)
Q Consensus 399 d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg-----~i~vW~~~~ 468 (536)
+ ..+.+||+.+.. +...........+|. ....++..++.||.++ .|.+||+.+
T Consensus 214 ~~~~~~~~~~~yd~~~~~-------------W~~~~~~~~~r~~~~----~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTNA-------------WRQVADMNMCRRNAG----VCAVNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp SSSSBCCCEEEEETTTTE-------------EEEECCCSSCCBSCE----EEEETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred CCCcccceEEEEeCCCCC-------------EeeCCCCCCccccCe----EEEECCEEEEECCcCCCcccccEEEEcCCC
Confidence 4 368888887631 111111111111222 2334566777787654 478888876
Q ss_pred h
Q 009373 469 A 469 (536)
Q Consensus 469 ~ 469 (536)
.
T Consensus 277 ~ 277 (302)
T 2xn4_A 277 D 277 (302)
T ss_dssp T
T ss_pred C
Confidence 5
No 277
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.71 E-value=0.067 Score=58.86 Aligned_cols=182 Identities=10% Similarity=-0.046 Sum_probs=96.5
Q ss_pred cccEEEEEEecC------CCEEEEEeC-CCcEEEEECCCCceeeeeCCC-CceE--EEEe-c-CCCEEEEEeCCCcEEEE
Q 009373 158 TEAVLTVFVLAS------AKLLFTSGY-DSIVRMWHLEDGFSIASSKPL-GCTI--RAVA-A-DKKLLVAGGTDGFIHCW 225 (536)
Q Consensus 158 ~~~V~~v~~~~~------~~~l~sgs~-dg~v~iwd~~~~~~~~~~~~~-~~~v--~~~~-~-~~~~l~sg~~dg~i~vw 225 (536)
.+.|.|+++.|. +++++.|.+ |++|+|+++.+.+.+....-. .... ..+. . ...+|..|-.||.+..+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 457999999863 469999997 999999999876655432211 1111 2222 2 33578899999998777
Q ss_pred EcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeeeccccEEEEe----
Q 009373 226 RAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLRHSDWVYGLA---- 299 (536)
Q Consensus 226 d~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~---- 299 (536)
.+....-.+.+ ....+.| ..++.-..+ .+..-+.+..++...++.-+ ++....--....+..++
T Consensus 633 ~~d~~tg~l~d--------~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s~l~~~~v~~~~~F~s 702 (1158)
T 3ei3_A 633 GLNIETGLLSD--------RKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFSNVNLKEVNYMCPLNS 702 (1158)
T ss_dssp EECTTTCCEEE--------EEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEEEBSSSCCCEEEEECC
T ss_pred EEcCCCCcccc--------ceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEeccChHHhceEeccCc
Confidence 65432101110 1111222 234433333 23322223334444444433 22211111222333333
Q ss_pred -ecCCEEEEecCCcEEEEeCCCCc--EEEEEccccccceEEEEEeCCCCEEEEEc
Q 009373 300 -PHDTTVASTSGSDVYIWDTNSGC--LLTVVNGAHVGNTKSLARSHTGDFLFTGG 351 (536)
Q Consensus 300 -~~~~~l~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~i~~l~~~~~~~~l~tg~ 351 (536)
....-++..+++.++|..+.... .++++. -...+..++++|..+.++.+.
T Consensus 703 e~~~~g~v~~~~~~LrI~~i~~~~~~~~~~ip--L~~Tprri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 703 DGYPDSLALANNSTLTIGTIDEIQKLHIRTVP--LYESPRKICYQEVSQCFGVLS 755 (1158)
T ss_dssp SSSTTEEEEECSSCEEEEEECCSSSEEEEEEE--CSSEEEEEEEEGGGTEEEEEE
T ss_pred ccCCCcEEEEcCCceEEEEecccCCeeEEEEe--CCCCceEEEEcCCCCEEEEEE
Confidence 12445666666778888775432 333342 456788889998877655543
No 278
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.70 E-value=0.0023 Score=66.47 Aligned_cols=229 Identities=7% Similarity=-0.029 Sum_probs=120.7
Q ss_pred EEEEEecCCCEEEEEeC-CCcEEEEECCCCceee--eeCCCC-ceEEEEecCCCEEEEEe-CC-----CcEEEEEcccCc
Q 009373 162 LTVFVLASAKLLFTSGY-DSIVRMWHLEDGFSIA--SSKPLG-CTIRAVAADKKLLVAGG-TD-----GFIHCWRAVEVL 231 (536)
Q Consensus 162 ~~v~~~~~~~~l~sgs~-dg~v~iwd~~~~~~~~--~~~~~~-~~v~~~~~~~~~l~sg~-~d-----g~i~vwd~~~~~ 231 (536)
.++++.+++.+++.|+. +..+.+||..+++-.. .+.... ....++.+++++++.|+ .+ ..+.+||..+..
T Consensus 246 ~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 35667788999999984 5689999988764322 222222 22334446899999998 44 568999987754
Q ss_pred cceecccCcccccceEEe-----eCCccCEEEEEE-eCCEEEEEecCCeEEEEeCCCceEeEeee-ccc---------cE
Q 009373 232 PHLFDISGSEKQNTQFRL-----WEHEGPITSLAL-DLTRIYSGSWDMTVRVWDRALLKCLKVLR-HSD---------WV 295 (536)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~-----~~h~~~v~~l~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~---------~v 295 (536)
........ ..+.... ..+.+.+..+.. ++..+ .......+..||..+........ ... .-
T Consensus 326 W~~~~~~~---~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~-~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~ 401 (656)
T 1k3i_A 326 WTSLPNAK---VNPMLTADKQGLYRSDNHAWLFGWKKGSVF-QAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCG 401 (656)
T ss_dssp EEEETTSC---SGGGCCCCTTGGGTTTCSCCEEECGGGCEE-ECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTC
T ss_pred ceeCCCcc---ccccccccccceeecCCceEEEECCCCcEE-EecCccceeeeecCCcceeecCCccccccccCCCCCCC
Confidence 22110000 0000000 001122211111 22222 12223467888987765443332 111 12
Q ss_pred EEEe---ecCCEEEEec-CC-----------cEEEEeCCCCcEEEEE--ccccccceEEEEEeCCCCEEEEEcCC-----
Q 009373 296 YGLA---PHDTTVASTS-GS-----------DVYIWDTNSGCLLTVV--NGAHVGNTKSLARSHTGDFLFTGGED----- 353 (536)
Q Consensus 296 ~~~~---~~~~~l~~~~-d~-----------~i~i~d~~~~~~~~~~--~~~~~~~i~~l~~~~~~~~l~tg~~d----- 353 (536)
.++. .++++++.|+ ++ .+.+||..+....... .......-.++...|++++++.|+.+
T Consensus 402 ~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~ 481 (656)
T 1k3i_A 402 NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF 481 (656)
T ss_dssp EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT
T ss_pred ceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCc
Confidence 2332 3677777766 22 5788998887654432 11112222345667899999999864
Q ss_pred ------CcEEEEEcccCccccccceeeeccCCCCCeEEEEE--cCCeEEEEeC
Q 009373 354 ------GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAF--EFPWLVSAAG 398 (536)
Q Consensus 354 ------g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~ 398 (536)
..+.+||..+.. ...+..+........+..+ ++..++.|+.
T Consensus 482 ~~~~~~~~v~~ydp~t~~----W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 482 EDSTPVFTPEIYVPEQDT----FYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCSBCCCCEEEEGGGTE----EEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCcccceEEEcCCCCc----eeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 468999987752 1122222222222223334 5578888875
No 279
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.68 E-value=0.015 Score=53.85 Aligned_cols=227 Identities=11% Similarity=0.017 Sum_probs=115.0
Q ss_pred CCEEEEEeCC--CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecC----CeEEEEeCCCc
Q 009373 210 KKLLVAGGTD--GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWD----MTVRVWDRALL 283 (536)
Q Consensus 210 ~~~l~sg~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~d----g~i~iwd~~~~ 283 (536)
+.+++.|+.+ ..+.+||..+..-... ..+......-..+..++..++.|+.+ ..+.+||..+.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~-----------~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~ 80 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDI-----------RCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKD 80 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEEC-----------CCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTT
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecC-----------CCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCC
Confidence 3455666653 5688888876532111 01111111222333466777777755 67889998877
Q ss_pred eEeEeee--c-cccEEEEeecCCEEEEec-C------CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcC-
Q 009373 284 KCLKVLR--H-SDWVYGLAPHDTTVASTS-G------SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGE- 352 (536)
Q Consensus 284 ~~~~~~~--~-~~~v~~~~~~~~~l~~~~-d------~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~- 352 (536)
+-...-. . ...-..+..++.+++.|+ + ..+.+||+.+.+-...-.......-.+++. -++.+++.|+.
T Consensus 81 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 159 (306)
T 3ii7_A 81 SWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSL 159 (306)
T ss_dssp EEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEE
T ss_pred eEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCC
Confidence 5433222 1 111122335667766665 3 359999999876443321111111112222 25666777654
Q ss_pred --------CCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEEeCC-----CcEEEEECCcccccCCCCCC
Q 009373 353 --------DGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAAGD-----GKLSLIDVRKLLRSGRPTSG 419 (536)
Q Consensus 353 --------dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~ 419 (536)
-..+.+||+.+.. ...+..+......-..+.+.+.+++.|+.+ ..+.+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~-------- 227 (306)
T 3ii7_A 160 GNNVSGRVLNSCEVYDPATET----WTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNE-------- 227 (306)
T ss_dssp SCTTTCEECCCEEEEETTTTE----EEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTE--------
T ss_pred CCCCcccccceEEEeCCCCCe----EEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCc--------
Confidence 3448899987762 122222222222223344455666666653 358888887631
Q ss_pred CceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCC-----CeEEEEeCCch
Q 009373 420 KRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEE-----GIVRIWNFSQA 469 (536)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~D-----g~i~vW~~~~~ 469 (536)
+...........+| .+...++..++.||.+ ..+.+||+.+.
T Consensus 228 -----W~~~~~~p~~r~~~----~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 228 -----WKMVSPMPWKGVTV----KCAAVGSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp -----EEECCCCSCCBSCC----EEEEETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred -----EEECCCCCCCccce----eEEEECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 11111111111122 2233356677888754 45788888764
No 280
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.61 E-value=0.054 Score=51.93 Aligned_cols=195 Identities=7% Similarity=-0.074 Sum_probs=110.9
Q ss_pred ccCEEEEEEe--CCEEE-EEecCCeEEEEeCCCceEeEeee-ccccE--EEEeecC-CEEEEec-CCcEEEEeCCCCcEE
Q 009373 253 EGPITSLALD--LTRIY-SGSWDMTVRVWDRALLKCLKVLR-HSDWV--YGLAPHD-TTVASTS-GSDVYIWDTNSGCLL 324 (536)
Q Consensus 253 ~~~v~~l~~~--~~~l~-s~s~dg~i~iwd~~~~~~~~~~~-~~~~v--~~~~~~~-~~l~~~~-d~~i~i~d~~~~~~~ 324 (536)
......++|+ .+.|+ +-...+.|..+++........+. ..... .++.+.+ .++++-. .+.|.+.++......
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 4457788885 34554 44567889999987665433333 11122 3444444 4444444 578988888755433
Q ss_pred EEEccccccceEEEEEeCCCCEEEEEc-CC-CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEe-CC
Q 009373 325 TVVNGAHVGNTKSLARSHTGDFLFTGG-ED-GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAA-GD 399 (536)
Q Consensus 325 ~~~~~~~~~~i~~l~~~~~~~~l~tg~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s-~d 399 (536)
..+ .........++++|.+..|+... .. +.|..+++.... ............+.|++++ ..|+.+. ..
T Consensus 195 ~l~-~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~------~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~ 267 (386)
T 3v65_B 195 VLL-WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG------RRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 267 (386)
T ss_dssp EEE-CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS------CEEEECSSCSCEEEEEEEGGGTEEEEEETTT
T ss_pred Eee-cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC------cEEEEECCCCCeeeEEEeCCCCEEEEEECCC
Confidence 333 23445688999998776555544 34 678888876541 1111122344578999974 5555554 46
Q ss_pred CcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC-EEEEecCCCeEEEEeCCchhhHH
Q 009373 400 GKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD-RIVCGGEEGIVRIWNFSQAFEIE 473 (536)
Q Consensus 400 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~sg~~Dg~i~vW~~~~~~~~~ 473 (536)
+.|..+|+...... . .+......-..++...+ .+++-...+.|..++..+|..+.
T Consensus 268 ~~I~~~d~dG~~~~----------~---------~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~ 323 (386)
T 3v65_B 268 HVIERANLDGSHRK----------A---------VISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQE 323 (386)
T ss_dssp TEEEEECTTSCSCE----------E---------EECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred CEEEEEeCCCCeeE----------E---------EEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceE
Confidence 78999987641100 0 01101111223333344 66677778889888866665543
No 281
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.58 E-value=0.027 Score=52.29 Aligned_cols=188 Identities=12% Similarity=0.170 Sum_probs=109.5
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEec----CCC---EEEEEe-C--CCcEEEEEcccCccceeccc
Q 009373 169 SAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAA----DKK---LLVAGG-T--DGFIHCWRAVEVLPHLFDIS 238 (536)
Q Consensus 169 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~----~~~---~l~sg~-~--dg~i~vwd~~~~~~~~~~~~ 238 (536)
...+++.....+-+.+||+ +|+.+..+......-..+.+ .++ ++++.. . +++|.+|++......+....
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~ 117 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMT 117 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECS
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecc
Confidence 3456777777889999999 89998888653322223322 333 223333 3 57899997742211111110
Q ss_pred CcccccceEEeeCCccCEEEEEE--e---CC-EEEEEecCCeEEEEeC-------CCceEeEeeeccccEEEEe--ecCC
Q 009373 239 GSEKQNTQFRLWEHEGPITSLAL--D---LT-RIYSGSWDMTVRVWDR-------ALLKCLKVLRHSDWVYGLA--PHDT 303 (536)
Q Consensus 239 ~~~~~~~~~~~~~h~~~v~~l~~--~---~~-~l~s~s~dg~i~iwd~-------~~~~~~~~~~~~~~v~~~~--~~~~ 303 (536)
... .+ +..-...+..+++ + +. +++....+|.+..|++ .+.+.+.++...+.+-.+. +...
T Consensus 118 ~~~--~p---v~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g 192 (355)
T 3amr_A 118 DPD--HP---IATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYG 192 (355)
T ss_dssp CTT--SC---EECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTT
T ss_pred ccc--cC---cCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCC
Confidence 000 00 0001134445555 3 22 5788888999999988 2446667777555555554 4556
Q ss_pred EEEEec-CCcEEEEeCC-----CCcEEEEEccccc-cceEEEEE--eCCCC-EEEEEc-CCCcEEEEEcc
Q 009373 304 TVASTS-GSDVYIWDTN-----SGCLLTVVNGAHV-GNTKSLAR--SHTGD-FLFTGG-EDGAIHMYEII 362 (536)
Q Consensus 304 ~l~~~~-d~~i~i~d~~-----~~~~~~~~~~~~~-~~i~~l~~--~~~~~-~l~tg~-~dg~i~iwd~~ 362 (536)
.|+.+. +..|..||.+ +++.+..+..++- ..+..|++ .++++ +|++++ .+.+..+||..
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 666666 6667778855 3455655532332 36788887 45555 565555 57789999985
No 282
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.58 E-value=0.0025 Score=67.30 Aligned_cols=192 Identities=13% Similarity=0.033 Sum_probs=104.6
Q ss_pred Cccc-cEEEEEEe-cCCCEEEEEeC-CC----cEEEEECCCC-ceeee-eCCCCceEEEEecCCCEEEEEeCC-----Cc
Q 009373 156 GHTE-AVLTVFVL-ASAKLLFTSGY-DS----IVRMWHLEDG-FSIAS-SKPLGCTIRAVAADKKLLVAGGTD-----GF 221 (536)
Q Consensus 156 ~h~~-~V~~v~~~-~~~~~l~sgs~-dg----~v~iwd~~~~-~~~~~-~~~~~~~v~~~~~~~~~l~sg~~d-----g~ 221 (536)
+|.- .+...+|| |||++||-+.. +| +|+++|+.++ +.+.. +.. ...-..++||++.|+....+ ..
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~-~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG-TNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE-ECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC-ceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 3443 68889999 99998875432 33 5999999998 63211 110 01124577999887777665 25
Q ss_pred EEEEEcccCccceecccCcccccceEEee-CCccCEEEEEE--eCCEEEEEec---CCeEEEEeCCCc--eE--eEeee-
Q 009373 222 IHCWRAVEVLPHLFDISGSEKQNTQFRLW-EHEGPITSLAL--DLTRIYSGSW---DMTVRVWDRALL--KC--LKVLR- 290 (536)
Q Consensus 222 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~--~~~~l~s~s~---dg~i~iwd~~~~--~~--~~~~~- 290 (536)
|+++++.++.. .....+. ........+.| ++++|+..+. ...|.++|+.++ +. .....
T Consensus 249 v~~~~lgt~~~-----------~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~ 317 (751)
T 2xe4_A 249 VWRHVMGKLQS-----------EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPR 317 (751)
T ss_dssp EEEEETTSCGG-----------GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCC
T ss_pred EEEEECCCCch-----------hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecC
Confidence 77777755421 1111121 22234556677 7777766553 346888898775 22 22222
Q ss_pred ccccEEEEe-ecCCEEEEec--C----CcEEEEeCCCC-cEEE-EEccccccceEEEEEeCCCCEEEEEcCCCcEEEEE
Q 009373 291 HSDWVYGLA-PHDTTVASTS--G----SDVYIWDTNSG-CLLT-VVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYE 360 (536)
Q Consensus 291 ~~~~v~~~~-~~~~~l~~~~--d----~~i~i~d~~~~-~~~~-~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd 360 (536)
......++. ..+..|+..+ + ..|..+|+.++ +... .+.......+..+.+. .+.++++...+|..++|-
T Consensus 318 ~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 318 EKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp CTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEE
T ss_pred CCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEE
Confidence 334445555 4466554433 3 25777887653 2222 2321112244555554 234556666777655443
No 283
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.57 E-value=0.011 Score=54.72 Aligned_cols=225 Identities=11% Similarity=0.056 Sum_probs=114.9
Q ss_pred CCCEEEEEeC----CCcEEEEECCCCceee--eeCCCCceEEEEecCCCEEEEEeC----C-----CcEEEEEcccCccc
Q 009373 169 SAKLLFTSGY----DSIVRMWHLEDGFSIA--SSKPLGCTIRAVAADKKLLVAGGT----D-----GFIHCWRAVEVLPH 233 (536)
Q Consensus 169 ~~~~l~sgs~----dg~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~sg~~----d-----g~i~vwd~~~~~~~ 233 (536)
++.+++.|+. -..+.+||..+.+-.. .+............++.+++.|+. + ..+.+||+.+..-.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence 4556666663 2468889987764322 111111111222346777777776 2 45788887665311
Q ss_pred eecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecC-----CeEEEEeCCCceEeEeee--c-cccEEEEeecCCEE
Q 009373 234 LFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWD-----MTVRVWDRALLKCLKVLR--H-SDWVYGLAPHDTTV 305 (536)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~--~-~~~v~~~~~~~~~l 305 (536)
.. ..+......-....+++..++.|+.+ ..+.+||..+.+-...-. . ...-.++..++.++
T Consensus 104 ~~-----------~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 172 (308)
T 1zgk_A 104 PC-----------APMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLY 172 (308)
T ss_dssp EC-----------CCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE
T ss_pred EC-----------CCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEE
Confidence 11 01111111222333466667776644 368889988765433222 1 11112223566776
Q ss_pred EEec-C-----CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCC-----CcEEEEEcccCccccccceee
Q 009373 306 ASTS-G-----SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGED-----GAIHMYEIINDCTEANVLLVA 374 (536)
Q Consensus 306 ~~~~-d-----~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~d-----g~i~iwd~~~~~~~~~~~~~~ 374 (536)
+.|+ + ..+.+||+.+.+-...-.......-.+++.. ++.+++.|+.+ ..+.+||+.+.. ...+.
T Consensus 173 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~----W~~~~ 247 (308)
T 1zgk_A 173 AVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETET----WTFVA 247 (308)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTE----EEECC
T ss_pred EEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCc----EEECC
Confidence 6665 3 4589999988754332111111111122222 56777777764 458999987762 12222
Q ss_pred eccCCCCCeEEEEEcCCeEEEEeCC-----CcEEEEECCc
Q 009373 375 TWIPHTGPVNSLAFEFPWLVSAAGD-----GKLSLIDVRK 409 (536)
Q Consensus 375 ~~~~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~ 409 (536)
.+.........+.+.+.+++.|+.+ ..+.+||+.+
T Consensus 248 ~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 248 PMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 2222222223444556667777654 3577888765
No 284
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.51 E-value=0.066 Score=50.47 Aligned_cols=194 Identities=8% Similarity=-0.070 Sum_probs=109.5
Q ss_pred ccCEEEEEEe--CCEEEE-EecCCeEEEEeCCCceEeEeee-ccccEEEE--eec-CCEEEEec-CCcEEEEeCCCCcEE
Q 009373 253 EGPITSLALD--LTRIYS-GSWDMTVRVWDRALLKCLKVLR-HSDWVYGL--APH-DTTVASTS-GSDVYIWDTNSGCLL 324 (536)
Q Consensus 253 ~~~v~~l~~~--~~~l~s-~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~--~~~-~~~l~~~~-d~~i~i~d~~~~~~~ 324 (536)
......++|+ .+.|+. -...+.|..+++........+. .......+ .+. +.++++-. .+.|.+.++......
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 3457788884 345554 4467889999987665433332 11223344 444 44445544 678999998755433
Q ss_pred EEEccccccceEEEEEeCCCCEEE-EEcCC-CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEe-CC
Q 009373 325 TVVNGAHVGNTKSLARSHTGDFLF-TGGED-GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAA-GD 399 (536)
Q Consensus 325 ~~~~~~~~~~i~~l~~~~~~~~l~-tg~~d-g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s-~d 399 (536)
..+ .........++++|.+..|+ +-... +.|..+++.... ........-...+.|++++ ..|+.+. ..
T Consensus 152 ~l~-~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~------~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~ 224 (349)
T 3v64_C 152 VLL-WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG------RRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 224 (349)
T ss_dssp EEE-CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS------CEESCCSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred EEE-eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC------cEEEEECCCCCcceEEEeCCCCEEEEEECCC
Confidence 333 23445678999999665554 44444 778888876541 1111122344578999985 5565554 46
Q ss_pred CcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEe-cCCEEEEecCCCeEEEEeCCchhhH
Q 009373 400 GKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDI-GADRIVCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 400 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~sg~~Dg~i~vW~~~~~~~~ 472 (536)
+.|..+|+...... . .+......-..++. .+..+++-...+.|...+..+|...
T Consensus 225 ~~I~~~~~dG~~~~----------~---------~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~ 279 (349)
T 3v64_C 225 HVIERANLDGSHRK----------A---------VISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQ 279 (349)
T ss_dssp TEEEEEETTSCSCE----------E---------EECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSC
T ss_pred CEEEEEeCCCCceE----------E---------EEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCcc
Confidence 78999987642100 0 00000111123333 3346666667788888886666544
No 285
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.51 E-value=0.022 Score=52.64 Aligned_cols=188 Identities=9% Similarity=-0.012 Sum_probs=96.3
Q ss_pred ecCCCEEEEEeCC----CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEec----C-----C
Q 009373 207 AADKKLLVAGGTD----GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSW----D-----M 273 (536)
Q Consensus 207 ~~~~~~l~sg~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~----d-----g 273 (536)
..++.+++.|+.+ ..+.+||..+..-... . .+......-..+..++..++.|+. + .
T Consensus 22 ~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~--~---------~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 90 (308)
T 1zgk_A 22 KVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRL--A---------DLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSS 90 (308)
T ss_dssp CCCCCEEEECCBSSSBCCCEEEEETTTTEEEEC--C---------CCSSCCBSCEEEEETTEEEEECCEEEETTEEEECC
T ss_pred CCCCEEEEEeCcCCCCcceEEEEcCCCCeEeEC--C---------CCCcccccceEEEECCEEEEECCCcCCCCCCeecc
Confidence 3556677777642 4578888766532111 0 010011111222336666667665 2 4
Q ss_pred eEEEEeCCCceEeEeee---ccccEEEEeecCCEEEEec-C-----CcEEEEeCCCCcEEEEEccccccceEEEEEeCCC
Q 009373 274 TVRVWDRALLKCLKVLR---HSDWVYGLAPHDTTVASTS-G-----SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTG 344 (536)
Q Consensus 274 ~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~l~~~~-d-----~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~ 344 (536)
.+.+||..+.+-...-. ....-..+..++++++.|+ + ..+.+||+.+.+-...-.......-.+++.. ++
T Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~ 169 (308)
T 1zgk_A 91 ALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NR 169 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TT
T ss_pred eEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CC
Confidence 68889988765433221 1111222335677777665 2 4689999988754332111111111122222 56
Q ss_pred CEEEEEcCC-----CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEEeCC-----CcEEEEECCcc
Q 009373 345 DFLFTGGED-----GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAAGD-----GKLSLIDVRKL 410 (536)
Q Consensus 345 ~~l~tg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~~ 410 (536)
.+++.|+.+ ..+.+||+.+..- ..+..+......-.++.++..+++.|+.+ ..+.+||+.+.
T Consensus 170 ~iyv~GG~~~~~~~~~~~~yd~~~~~W----~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 170 LLYAVGGFDGTNRLNSAECYYPERNEW----RMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTTEE----EECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEEEEeCCCCCCcCceEEEEeCCCCeE----eeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 777777654 4588999876521 12222222222223444556667777654 46889998763
No 286
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.50 E-value=4.3e-05 Score=72.32 Aligned_cols=43 Identities=40% Similarity=0.502 Sum_probs=40.7
Q ss_pred ccCCcHHHHHHHhcCCChhhHHHHhhhhHHHHHHhcCChhhHH
Q 009373 64 ITDLPPALISEILNCLDPKELGIVSCVSPILHRLASDHHAWKE 106 (536)
Q Consensus 64 l~~Lp~ei~~~I~~~L~~~~l~~~~~v~~~~~~l~~~~~lW~~ 106 (536)
+..||+|++.+||+||+..++.++++|||+|+.++.+..+|+.
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~~~ 51 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQT 51 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTSSE
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhhee
Confidence 7899999999999999999999999999999999988888875
No 287
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.47 E-value=0.074 Score=50.14 Aligned_cols=230 Identities=10% Similarity=-0.058 Sum_probs=126.4
Q ss_pred cccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCc-eEEEEecCCCEE-EEEeCCCcEEEEEcccCcccee
Q 009373 158 TEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGC-TIRAVAADKKLL-VAGGTDGFIHCWRAVEVLPHLF 235 (536)
Q Consensus 158 ~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~l-~sg~~dg~i~vwd~~~~~~~~~ 235 (536)
.+..+|.+..++. +|+.+ ....|+..++.............. .-+++.+.++.| ++-...+.|..+++.....
T Consensus 33 ~d~~~C~~~~~~~-~ll~~-~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~--- 107 (349)
T 3v64_C 33 PDRRSCKALGPEP-VLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV--- 107 (349)
T ss_dssp TTSSCEEESSSCC-EEEEE-CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---
T ss_pred CCCCcccccccCc-eeEee-cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc---
Confidence 3445666666644 34333 335688888876554443333322 234555554544 4445678888888765421
Q ss_pred cccCcccccceEEeeCCccCEEEEEEe--CCEE-EEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecCCEEEEec
Q 009373 236 DISGSEKQNTQFRLWEHEGPITSLALD--LTRI-YSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHDTTVASTS 309 (536)
Q Consensus 236 ~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l-~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~~~l~~~~ 309 (536)
.............++++ ++.| ++-...+.|.+.++........+. .-.....++ |.+..++.+.
T Consensus 108 ----------~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td 177 (349)
T 3v64_C 108 ----------EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTD 177 (349)
T ss_dssp ----------EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred ----------eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEec
Confidence 11111112234556663 4444 555567889999987543333232 223345554 5455444443
Q ss_pred --C-CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEE-EcCCCcEEEEEcccCccccccceeeeccCCCCCeEE
Q 009373 310 --G-SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFT-GGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNS 385 (536)
Q Consensus 310 --d-~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~t-g~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~ 385 (536)
. +.|..+++..... ..+........+.++++|++..|.. -+..+.|..+|+.... ....+........+
T Consensus 178 ~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~------~~~~~~~~~~~P~g 250 (349)
T 3v64_C 178 WGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH------RKAVISQGLPHPFA 250 (349)
T ss_dssp CSSSCEEEEEETTSCSC-EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS------CEEEECSSCSSEEE
T ss_pred cCCCCEEEEEeCCCCCc-EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc------eEEEEeCCCCCceE
Confidence 4 6788888765432 2332223446789999987665554 4556789999986542 11112223445677
Q ss_pred EEEcCCeEEEEe-CCCcEEEEECCc
Q 009373 386 LAFEFPWLVSAA-GDGKLSLIDVRK 409 (536)
Q Consensus 386 l~~~~~~l~s~s-~dg~i~vwd~~~ 409 (536)
|++..+.|+.+. ..+.|..+|..+
T Consensus 251 iav~~~~ly~td~~~~~V~~~~~~~ 275 (349)
T 3v64_C 251 ITVFEDSLYWTDWHTKSINSANKFT 275 (349)
T ss_dssp EEEETTEEEEEETTTTEEEEEETTT
T ss_pred EEEECCEEEEecCCCCeEEEEEccC
Confidence 777666555554 467787777544
No 288
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.46 E-value=0.054 Score=48.18 Aligned_cols=198 Identities=11% Similarity=0.059 Sum_probs=118.4
Q ss_pred eeeeCccccEEEEEEecCCC-EEEEEeCCCcEEEEECCCCceeeeeCC---CCceEEEEecCCCEEEEEeCCCcEEEEEc
Q 009373 152 DVLYGHTEAVLTVFVLASAK-LLFTSGYDSIVRMWHLEDGFSIASSKP---LGCTIRAVAADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 152 ~~l~~h~~~V~~v~~~~~~~-~l~sgs~dg~v~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~l~sg~~dg~i~vwd~ 227 (536)
+.+.|-.+.+..++|+|++. ++++...++.|...|.. ++.+..+.- ....-.++..++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 46667777899999999766 45557778999999988 887777632 22233344466766666667788888887
Q ss_pred ccCccceecccCcccccceEEe----eCCccCEEEEEEe--CCEEEEEecCCeEEEEeCC---CceEeEeee--------
Q 009373 228 VEVLPHLFDISGSEKQNTQFRL----WEHEGPITSLALD--LTRIYSGSWDMTVRVWDRA---LLKCLKVLR-------- 290 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~---~~~~~~~~~-------- 290 (536)
..... +.. .....+ .........++++ ++.|+++.......+|.+. ....+..+.
T Consensus 99 ~~~~~-i~~-------~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~ 170 (255)
T 3qqz_A 99 TPNSE-VKI-------LKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQF 170 (255)
T ss_dssp CTTCC-EEE-------EEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTC
T ss_pred CCCCe-eee-------eeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccc
Confidence 65431 000 000111 1235567899994 4577777766555555543 111122221
Q ss_pred ccccEEEEe--ec-CCEEEEec-CCcEEEEeCCCCcEEEEEcc--cc------ccceEEEEEeCCCCEEEEEcCCCcEEE
Q 009373 291 HSDWVYGLA--PH-DTTVASTS-GSDVYIWDTNSGCLLTVVNG--AH------VGNTKSLARSHTGDFLFTGGEDGAIHM 358 (536)
Q Consensus 291 ~~~~v~~~~--~~-~~~l~~~~-d~~i~i~d~~~~~~~~~~~~--~~------~~~i~~l~~~~~~~~l~tg~~dg~i~i 358 (536)
....+.+++ |. +++++.+. +..+..+|.. ++.+..+.- +. ..+...|+|.++|++.++ ++...+++
T Consensus 171 ~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~ 248 (255)
T 3qqz_A 171 TLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYR 248 (255)
T ss_dssp CSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEE
T ss_pred ccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEE
Confidence 111233444 43 44555555 5778999976 555555432 21 126789999999985555 66666666
Q ss_pred EE
Q 009373 359 YE 360 (536)
Q Consensus 359 wd 360 (536)
|.
T Consensus 249 f~ 250 (255)
T 3qqz_A 249 FT 250 (255)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 289
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.45 E-value=0.042 Score=50.92 Aligned_cols=220 Identities=10% Similarity=0.022 Sum_probs=112.4
Q ss_pred EEEEEeCCCcEEEEECCCCceee-eeCC--CCceEEEEecCCCEEEEEeC----C-------CcEEEEEcccCccceecc
Q 009373 172 LLFTSGYDSIVRMWHLEDGFSIA-SSKP--LGCTIRAVAADKKLLVAGGT----D-------GFIHCWRAVEVLPHLFDI 237 (536)
Q Consensus 172 ~l~sgs~dg~v~iwd~~~~~~~~-~~~~--~~~~v~~~~~~~~~l~sg~~----d-------g~i~vwd~~~~~~~~~~~ 237 (536)
+++.|+ ..+.+||..+++-.. .+.. ..........++.+++.|+. + ..+.+||..+..-...
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~-- 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM-- 82 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC--
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC--
Confidence 344555 578899998876332 2211 22233344467888888884 1 1267777766531110
Q ss_pred cCcccccceEEeeCCccCEEEEEEeCCEEEEEecC--------CeEEEEeCCCceEeEeee--c-cccEEEEeecCCEEE
Q 009373 238 SGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWD--------MTVRVWDRALLKCLKVLR--H-SDWVYGLAPHDTTVA 306 (536)
Q Consensus 238 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~d--------g~i~iwd~~~~~~~~~~~--~-~~~v~~~~~~~~~l~ 306 (536)
..+......-....+++..++.|+.+ ..+.+||..+.+-...-. . ...-.++..++++++
T Consensus 83 ---------~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 153 (315)
T 4asc_A 83 ---------PPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYV 153 (315)
T ss_dssp ---------CCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE
T ss_pred ---------CCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEE
Confidence 00111111112223366666677643 458899988765332211 1 111223336666666
Q ss_pred EecC-------CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCC-----cEEEEEcccCccccccceee
Q 009373 307 STSG-------SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDG-----AIHMYEIINDCTEANVLLVA 374 (536)
Q Consensus 307 ~~~d-------~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg-----~i~iwd~~~~~~~~~~~~~~ 374 (536)
.|+. ..+.+||+.+.+-...-.......-.+++. -++++++.|+.++ .+.+||+.+.. ...+.
T Consensus 154 ~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~----W~~~~ 228 (315)
T 4asc_A 154 IGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNK----WAPFE 228 (315)
T ss_dssp ECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTE----EEEEC
T ss_pred EeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCe----EEECC
Confidence 6652 359999998875433211111111112222 2567777777654 47888887652 12222
Q ss_pred eccCCCCCeEEEEEcCCeEEEEeCCC--------------cEEEEECCc
Q 009373 375 TWIPHTGPVNSLAFEFPWLVSAAGDG--------------KLSLIDVRK 409 (536)
Q Consensus 375 ~~~~h~~~v~~l~~~~~~l~s~s~dg--------------~i~vwd~~~ 409 (536)
.+.........+.+.+..++.|+.++ .+.+||+.+
T Consensus 229 ~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 277 (315)
T 4asc_A 229 AFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEE 277 (315)
T ss_dssp CCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT
T ss_pred CCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCC
Confidence 22222223344455666777777532 366778765
No 290
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.45 E-value=0.081 Score=50.67 Aligned_cols=192 Identities=10% Similarity=0.003 Sum_probs=110.3
Q ss_pred cccEEEEEEecCCC-EEEEEeCCCcEEEEECCCCceeeeeCC--CCceEEEEecCC-CEEEEEeCCCcEEEEEcccCccc
Q 009373 158 TEAVLTVFVLASAK-LLFTSGYDSIVRMWHLEDGFSIASSKP--LGCTIRAVAADK-KLLVAGGTDGFIHCWRAVEVLPH 233 (536)
Q Consensus 158 ~~~V~~v~~~~~~~-~l~sgs~dg~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~~-~~l~sg~~dg~i~vwd~~~~~~~ 233 (536)
...+..++|++.+. ++++-...+.|..+++..+.....+.. ....-+++.+.+ .++++-...+.|.+.++....
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~-- 192 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-- 192 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS--
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc--
Confidence 34578899997554 555555678899999886653332221 122234566544 444555556777777764331
Q ss_pred eecccCcccccceEEeeCCccCEEEEEEe--CCEEEEEe-cC-CeEEEEeCCCceEeEeee-ccccEEEEe--ecCCEEE
Q 009373 234 LFDISGSEKQNTQFRLWEHEGPITSLALD--LTRIYSGS-WD-MTVRVWDRALLKCLKVLR-HSDWVYGLA--PHDTTVA 306 (536)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s-~d-g~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~~~l~ 306 (536)
....+.........++++ +..|+.+. .. +.|..+++.......... .-.....++ +++..|+
T Consensus 193 -----------~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY 261 (386)
T 3v65_B 193 -----------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMY 261 (386)
T ss_dssp -----------CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEE
T ss_pred -----------eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEE
Confidence 111122233456788885 45555444 33 678888876433322222 222345555 4555554
Q ss_pred Ee-c-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccC
Q 009373 307 ST-S-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIIND 364 (536)
Q Consensus 307 ~~-~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~ 364 (536)
.+ . .+.|..+|+........+. ........+++ ..+.++++-...+.|..++..++
T Consensus 262 ~aD~~~~~I~~~d~dG~~~~~~~~-~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 262 WVDAKHHVIERANLDGSHRKAVIS-QGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp EEETTTTEEEEECTTSCSCEEEEC-SSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred EEECCCCEEEEEeCCCCeeEEEEE-CCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC
Confidence 44 4 5789999987544333332 23445677888 34566677777888888886555
No 291
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.43 E-value=0.088 Score=50.00 Aligned_cols=188 Identities=16% Similarity=0.205 Sum_probs=123.6
Q ss_pred CCeEEEEeCCCceEeEeeeccccEEEEe-ecCCEEEEecCCcEEEEeCCCC-cEEEEEcccc----ccceEEEEEeCCCC
Q 009373 272 DMTVRVWDRALLKCLKVLRHSDWVYGLA-PHDTTVASTSGSDVYIWDTNSG-CLLTVVNGAH----VGNTKSLARSHTGD 345 (536)
Q Consensus 272 dg~i~iwd~~~~~~~~~~~~~~~v~~~~-~~~~~l~~~~d~~i~i~d~~~~-~~~~~~~~~~----~~~i~~l~~~~~~~ 345 (536)
..++.++|+++.+.++.+.....|.-.. -+.+.|+..++..|+.|++... .+...+.. | ...|..-..+++.+
T Consensus 85 g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT~taVyHWsi~~~s~P~kvFdR-~~~L~~~QIInY~~d~~~k 163 (494)
T 1bpo_A 85 GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDR-HSSLAGCQIINYRTDAKQK 163 (494)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEECSSEEEEEESSSSCCCEEEEEC-CGGGTTCEEEEEEECTTSS
T ss_pred CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEcCCeeEEecccCCCCchhheec-chhcccceEEEEEECCCCC
Confidence 6899999999999999988767777676 6788999999999999999753 45555532 3 34677788889999
Q ss_pred EEEEEcC-------CCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC-----CeEEEEeCC---CcEEEEECCcc
Q 009373 346 FLFTGGE-------DGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF-----PWLVSAAGD---GKLSLIDVRKL 410 (536)
Q Consensus 346 ~l~tg~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~s~d---g~i~vwd~~~~ 410 (536)
+++..+- .|.+.+|..... ..+.+.||.+.-..+..++ ..++.+... ++++|-++...
T Consensus 164 W~~l~GI~~~~~~v~G~mQLYS~er~-------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~ 236 (494)
T 1bpo_A 164 WLLLTGISAQQNRVVGAMQLYSVDRK-------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 236 (494)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESTTC-------CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCC
T ss_pred eEEEEeecccCCcccceEEEeecccc-------ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCC
Confidence 8775432 467889987665 4566788887777777754 244444443 78999998653
Q ss_pred cccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--EEEEecCCCeEEEEeCCchhhHHH
Q 009373 411 LRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RIVCGGEEGIVRIWNFSQAFEIER 474 (536)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~sg~~Dg~i~vW~~~~~~~~~~ 474 (536)
.... ....++...+. .++ .....--.++..+.. .+..-..-|.|++||++++..+..
T Consensus 237 ~~~~-~~f~kk~vdv~--fpp----e~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 237 PTGN-QPFPKKAVDVF--FPP----EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (494)
T ss_dssp CTTC-CCCCCEEEECC--CCT----TSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ccCC-CCccceeeeee--CCc----ccccCceeEEEecccCCEEEEEecCceEEEEecccceeeee
Confidence 1111 11111111110 111 011111234444444 666667789999999999987653
No 292
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.39 E-value=0.085 Score=51.36 Aligned_cols=145 Identities=7% Similarity=-0.038 Sum_probs=85.2
Q ss_pred EEEEec-CCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecC-C----e
Q 009373 203 IRAVAA-DKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWD-M----T 274 (536)
Q Consensus 203 v~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~d-g----~ 274 (536)
-+++.| ++..|+++...+.|..+|+.++. +..+.........+++ +++.|+.+... + .
T Consensus 141 ~lavdp~~~g~Lyv~d~~~~I~~id~~~~~--------------v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~ 206 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLVGEQHPTRLIDFEKEY--------------VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPN 206 (430)
T ss_dssp EEEEETTEEEEEEEEEBTEEEEEEETTTTE--------------EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEE
T ss_pred EEEECCCCCCeEEEEeCCCcEEEEECCCCE--------------EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccce
Confidence 345666 35566666655778888875542 2223334456778888 56656655542 1 3
Q ss_pred EEEEeCCCceEe--Eeee---ccccEEEEee-cCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCC-E
Q 009373 275 VRVWDRALLKCL--KVLR---HSDWVYGLAP-HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGD-F 346 (536)
Q Consensus 275 i~iwd~~~~~~~--~~~~---~~~~v~~~~~-~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~ 346 (536)
+...+. .+... ..+. +... .++.+ ++.++++-. ++.|..+|...+........+.......++++|+|+ +
T Consensus 207 v~~~~~-~g~~~~~~~l~~~~~p~g-iavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~l 284 (430)
T 3tc9_A 207 NYILTR-ESGFKVITELTKGQNCNG-AETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYA 284 (430)
T ss_dssp EEEEEG-GGTSCSEEEEEECSSCCC-EEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEE
T ss_pred EEEEeC-CCceeeeeeeccCCCceE-EEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEE
Confidence 443443 22211 2222 2222 23456 667666665 688999999877653333222234578999999999 4
Q ss_pred EEEEcCCCcEEEEEccc
Q 009373 347 LFTGGEDGAIHMYEIIN 363 (536)
Q Consensus 347 l~tg~~dg~i~iwd~~~ 363 (536)
+++-...+.|..++...
T Consensus 285 yv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 285 YIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEETTTTEEEEEEEET
T ss_pred EEEECCCCEEEEEeCCc
Confidence 55556678899988764
No 293
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.27 E-value=0.12 Score=47.96 Aligned_cols=194 Identities=9% Similarity=-0.010 Sum_probs=110.1
Q ss_pred cCEEEEEEe--CCEE-EEEecCCeEEEEeCCCceEeE-eee-ccccEEEE--eec-CCEEEEec-CCcEEEEeCCCCcEE
Q 009373 254 GPITSLALD--LTRI-YSGSWDMTVRVWDRALLKCLK-VLR-HSDWVYGL--APH-DTTVASTS-GSDVYIWDTNSGCLL 324 (536)
Q Consensus 254 ~~v~~l~~~--~~~l-~s~s~dg~i~iwd~~~~~~~~-~~~-~~~~v~~~--~~~-~~~l~~~~-d~~i~i~d~~~~~~~ 324 (536)
.....++|+ .+.| ++-...+.|..+++....... .+. .-.....+ .+. +.++++-. .+.|.++++......
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 346678884 3444 454567889999987653211 122 11223334 443 44445544 678999998754433
Q ss_pred EEEccccccceEEEEEeCCCCEEEEEc--CCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEEe-CC
Q 009373 325 TVVNGAHVGNTKSLARSHTGDFLFTGG--EDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAA-GD 399 (536)
Q Consensus 325 ~~~~~~~~~~i~~l~~~~~~~~l~tg~--~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s-~d 399 (536)
..+ .........++++|.+..|+... ..+.|...++.... ........-...+.|++++ ..|+.+. ..
T Consensus 115 ~l~-~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~------~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~ 187 (318)
T 3sov_A 115 VLF-WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS------RFIIINSEIYWPNGLTLDYEEQKLYWADAKL 187 (318)
T ss_dssp EEE-CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS------CEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred EEE-eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC------eEEEEECCCCCccEEEEeccCCEEEEEECCC
Confidence 323 23445678999999766655554 35778888876431 1111112234568999985 5666554 46
Q ss_pred CcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC-EEEEecCCCeEEEEeCCchhhHH
Q 009373 400 GKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD-RIVCGGEEGIVRIWNFSQAFEIE 473 (536)
Q Consensus 400 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~sg~~Dg~i~vW~~~~~~~~~ 473 (536)
+.|..+|+..... .. ...+....-..++.+.+ .+++-...+.|..++..+|....
T Consensus 188 ~~I~~~d~dG~~~----------~~---------~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~ 243 (318)
T 3sov_A 188 NFIHKSNLDGTNR----------QA---------VVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLR 243 (318)
T ss_dssp TEEEEEETTSCSC----------EE---------EECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred CEEEEEcCCCCce----------EE---------EecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceE
Confidence 7899999863110 00 01111112234444444 56666678889999987776543
No 294
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.26 E-value=0.15 Score=49.04 Aligned_cols=219 Identities=13% Similarity=-0.011 Sum_probs=123.9
Q ss_pred CCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEe--CCEEEEE-ecCCeEEEEeCCCce----EeEeee
Q 009373 218 TDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD--LTRIYSG-SWDMTVRVWDRALLK----CLKVLR 290 (536)
Q Consensus 218 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~-s~dg~i~iwd~~~~~----~~~~~~ 290 (536)
....|+..++.... ...+......+..++|+ .+.|+.+ ...+.|..+++.... ....+.
T Consensus 90 ~~~~I~~i~l~~~~--------------~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~ 155 (400)
T 3p5b_L 90 NRHEVRKMTLDRSE--------------YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 155 (400)
T ss_dssp ETTEEEEECTTSCS--------------CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC
T ss_pred ccceeEEEccCCcc--------------eeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe
Confidence 34677777775432 11223345677889995 4555544 456888888886522 222222
Q ss_pred -ccccEEEEe--e-cCCEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcC--CCcEEEEEccc
Q 009373 291 -HSDWVYGLA--P-HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGE--DGAIHMYEIIN 363 (536)
Q Consensus 291 -~~~~v~~~~--~-~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~--dg~i~iwd~~~ 363 (536)
.......++ + .++++++-. .+.|.+.++........+. ........++++|.+..|+.... .+.|...++..
T Consensus 156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~-~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE-CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe-CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 223344554 4 344555544 6889999988665444443 24456889999997666555442 36788888765
Q ss_pred CccccccceeeeccCCCCCeEEEEEcC--CeEEEEe-CCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccc
Q 009373 364 DCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSAA-GDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFEC 440 (536)
Q Consensus 364 ~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (536)
.. ........-...+.|++++ ..|+.+. ..+.|..+|+..... ..+... .+.-.
T Consensus 235 ~~------~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~----------~~~~~~-------~~~l~ 291 (400)
T 3p5b_L 235 VD------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR----------KTILED-------EKRLA 291 (400)
T ss_dssp CS------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC----------EEEEEC-------SSTTS
T ss_pred Cc------cEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc----------EEEEeC-------CCCCC
Confidence 42 1111223335678999985 5666665 457899998864211 001000 00111
Q ss_pred cEEEEEecCC-EEEEecCCCeEEEEeCCchhhHHH
Q 009373 441 NLLSVDIGAD-RIVCGGEEGIVRIWNFSQAFEIER 474 (536)
Q Consensus 441 ~v~~~~~~~~-~l~sg~~Dg~i~vW~~~~~~~~~~ 474 (536)
.-.+++..++ .+++-...+.|..++..+|..+..
T Consensus 292 ~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~ 326 (400)
T 3p5b_L 292 HPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNL 326 (400)
T ss_dssp SEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEE
T ss_pred CCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEE
Confidence 2234444455 666767778899999777765543
No 295
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.20 E-value=0.09 Score=48.73 Aligned_cols=213 Identities=9% Similarity=0.033 Sum_probs=106.6
Q ss_pred cEEEEECCCCceee-eeC--CCCceEEEEecCCCEEEEEeC----CC-------cEEEEEcccCccceecccCcccccce
Q 009373 181 IVRMWHLEDGFSIA-SSK--PLGCTIRAVAADKKLLVAGGT----DG-------FIHCWRAVEVLPHLFDISGSEKQNTQ 246 (536)
Q Consensus 181 ~v~iwd~~~~~~~~-~~~--~~~~~v~~~~~~~~~l~sg~~----dg-------~i~vwd~~~~~~~~~~~~~~~~~~~~ 246 (536)
.+..||..+++-.. ... ...........++.+++.|+. ++ .+.+||..+..-...
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~----------- 93 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL----------- 93 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC-----------
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC-----------
Confidence 37888988775433 111 112223334467788888873 12 166777765431110
Q ss_pred EEeeCCccCEEEEEEeCCEEEEEecC-------CeEEEEeCCCceEeEeeeccc---cEEEEeecCCEEEEec-C-----
Q 009373 247 FRLWEHEGPITSLALDLTRIYSGSWD-------MTVRVWDRALLKCLKVLRHSD---WVYGLAPHDTTVASTS-G----- 310 (536)
Q Consensus 247 ~~~~~h~~~v~~l~~~~~~l~s~s~d-------g~i~iwd~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~-d----- 310 (536)
..+......-....+++..++.|+.+ ..+.+||..+.+-...-.... .-.++..++.+++.|+ +
T Consensus 94 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 173 (318)
T 2woz_A 94 PPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKC 173 (318)
T ss_dssp SCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCB
T ss_pred CCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCc
Confidence 01111111122233466777777764 357888988765433222111 1122236677766665 1
Q ss_pred -CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCC-----cEEEEEcccCccccccceeeeccCCCCCeE
Q 009373 311 -SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDG-----AIHMYEIINDCTEANVLLVATWIPHTGPVN 384 (536)
Q Consensus 311 -~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~ 384 (536)
..+.+||+.+.+-...-.......-.+++.. ++.+++.|+.++ .+.+||+.+.. ...+..+........
T Consensus 174 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~~~~ 248 (318)
T 2woz_A 174 TNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNK----WEVMTEFPQERSSIS 248 (318)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCC----EEECCCCSSCCBSCE
T ss_pred cceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCe----EEECCCCCCcccceE
Confidence 3599999998764433211111111122222 567777776542 47788887652 122222222222223
Q ss_pred EEEEcCCeEEEEeCC--------------CcEEEEECCc
Q 009373 385 SLAFEFPWLVSAAGD--------------GKLSLIDVRK 409 (536)
Q Consensus 385 ~l~~~~~~l~s~s~d--------------g~i~vwd~~~ 409 (536)
.+.+.+.+++.|+.+ ..+.+||+.+
T Consensus 249 ~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 249 LVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp EEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT
T ss_pred EEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC
Confidence 444556666666654 3467777765
No 296
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.10 E-value=0.068 Score=50.70 Aligned_cols=154 Identities=13% Similarity=0.196 Sum_probs=98.1
Q ss_pred EeecCCEEEEecCCcEEEEeCCCCcEEEEEcccc---ccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccc-----
Q 009373 298 LAPHDTTVASTSGSDVYIWDTNSGCLLTVVNGAH---VGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEAN----- 369 (536)
Q Consensus 298 ~~~~~~~l~~~~d~~i~i~d~~~~~~~~~~~~~~---~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~----- 369 (536)
++.++.-++.+.++.||.-++..+...+.+...+ ...|..+..+|+|.+||..+. ..|.|-.+..+.....
T Consensus 28 ~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 28 SSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp EETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHH
T ss_pred EEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccc
Confidence 3466777777778888888887554455554332 236788999999999998864 5799999874321111
Q ss_pred -cceeeeccC------CCCCeEEEEEcC-----CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCee--ee
Q 009373 370 -VLLVATWIP------HTGPVNSLAFEF-----PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQR--ML 435 (536)
Q Consensus 370 -~~~~~~~~~------h~~~v~~l~~~~-----~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 435 (536)
......+.- ...+|..+.|+| ..|++-..|+.|++||+...... +. .+ ..... .+
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~--P~------~L---~k~~~~fg~ 175 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEK--PI------VL---NKPNNSFGL 175 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSC--CE------EE---SCCCSEEES
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCC--Cc------ch---hccccccCC
Confidence 011112211 357899999987 68999999999999999862110 00 00 11111 11
Q ss_pred ccccccEEEEEecCC----EEEEecCCCeEEE
Q 009373 436 HGFECNLLSVDIGAD----RIVCGGEEGIVRI 463 (536)
Q Consensus 436 ~~~~~~v~~~~~~~~----~l~sg~~Dg~i~v 463 (536)
......+.+++|+++ |+++....|-|+-
T Consensus 176 d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 176 DARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp CSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred CcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 223356777888776 6677778888865
No 297
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.08 E-value=0.18 Score=46.64 Aligned_cols=216 Identities=13% Similarity=-0.018 Sum_probs=118.1
Q ss_pred CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEe--CCEEEEE-ecCCeEEEEeCCC----ceEeEeee-c
Q 009373 220 GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD--LTRIYSG-SWDMTVRVWDRAL----LKCLKVLR-H 291 (536)
Q Consensus 220 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~-s~dg~i~iwd~~~----~~~~~~~~-~ 291 (536)
..|+..|+.+.. .. .+.........++|+ ++.|+.+ ..++.|..+++.. ......+. .
T Consensus 10 ~~I~~i~~~~~~-------------~~-~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~ 75 (316)
T 1ijq_A 10 HEVRKMTLDRSE-------------YT-SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 75 (316)
T ss_dssp SSEEEEETTSCC-------------CE-EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS
T ss_pred CeEEEEECCCcc-------------eE-ehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC
Confidence 467888876542 11 122234567788884 3455544 4568999999875 22222222 1
Q ss_pred cccEEEEe--ecC-CEEEEec-CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcC-C-CcEEEEEcccCc
Q 009373 292 SDWVYGLA--PHD-TTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGE-D-GAIHMYEIINDC 365 (536)
Q Consensus 292 ~~~v~~~~--~~~-~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~-d-g~i~iwd~~~~~ 365 (536)
......++ +.+ +++++-. .+.|.++|+........+. ........++++|.+..|+.+.. . +.|..+++....
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~ 154 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 154 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE-CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC
Confidence 12334444 434 4444544 6889999987554333332 23456789999997665554443 3 678888875431
Q ss_pred cccccceeeeccCCCCCeEEEEEcC--CeEEEEe-CCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccE
Q 009373 366 TEANVLLVATWIPHTGPVNSLAFEF--PWLVSAA-GDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNL 442 (536)
Q Consensus 366 ~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 442 (536)
. ..+ ....-...+.|++++ ..|+.+. ..+.|..+|+..... ..+.... +....-
T Consensus 155 ~----~~~--~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~----------~~~~~~~-------~~~~~P 211 (316)
T 1ijq_A 155 I----YSL--VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR----------KTILEDE-------KRLAHP 211 (316)
T ss_dssp E----EEE--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----------EEEEECT-------TTTSSE
T ss_pred e----EEE--EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce----------EEEeecC-------CccCCc
Confidence 1 111 112345678999985 5666555 457899999864110 0010000 001112
Q ss_pred EEEEecCC-EEEEecCCCeEEEEeCCchhhHH
Q 009373 443 LSVDIGAD-RIVCGGEEGIVRIWNFSQAFEIE 473 (536)
Q Consensus 443 ~~~~~~~~-~l~sg~~Dg~i~vW~~~~~~~~~ 473 (536)
..++.+++ .+++-...+.|..++..++..+.
T Consensus 212 ~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~ 243 (316)
T 1ijq_A 212 FSLAVFEDKVFWTDIINEAIFSANRLTGSDVN 243 (316)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEETTTCCCCE
T ss_pred EEEEEECCEEEEEECCCCeEEEEeCCCCcceE
Confidence 23333344 66666778889999987776544
No 298
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.05 E-value=0.15 Score=45.24 Aligned_cols=161 Identities=11% Similarity=0.082 Sum_probs=100.6
Q ss_pred EeeCCccCEEEEEEe--CCEEE-EEecCCeEEEEeCCCceEeEeeecc--ccEEEEe--ecCCEEEEec-CCcEEEEeCC
Q 009373 248 RLWEHEGPITSLALD--LTRIY-SGSWDMTVRVWDRALLKCLKVLRHS--DWVYGLA--PHDTTVASTS-GSDVYIWDTN 319 (536)
Q Consensus 248 ~~~~h~~~v~~l~~~--~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~--~~~~~l~~~~-d~~i~i~d~~ 319 (536)
.+.+-.+.+..++++ ++.|+ +...++.|...|.. ++.+..+... ...-.++ .++.++++.. ++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 345666789999995 45555 46778899999997 8887777522 3444454 5666656554 6789999876
Q ss_pred CCcE---EEEEcc-----ccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeee----ccCCCCCeEEEE
Q 009373 320 SGCL---LTVVNG-----AHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVAT----WIPHTGPVNSLA 387 (536)
Q Consensus 320 ~~~~---~~~~~~-----~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~----~~~h~~~v~~l~ 387 (536)
.... +..... ........++++|.++.|+++.+.....+|.+.............. -..+...+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 5442 222211 1334568999999998888887776677777652100001111100 012344678999
Q ss_pred EcC---CeEEEEeCCCcEEEEECCc
Q 009373 388 FEF---PWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 388 ~~~---~~l~s~s~dg~i~vwd~~~ 409 (536)
++| .+++.......|.++|...
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g 204 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVG 204 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTC
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCC
Confidence 987 3555556667788888764
No 299
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.05 E-value=0.24 Score=48.11 Aligned_cols=188 Identities=13% Similarity=0.111 Sum_probs=103.4
Q ss_pred cEEEEEEecC--CCEEEEEeCCCcEEEEECCCCceeeeeCCCC-ceEEEEecCCCEEEEEeCCC----c-EEEEEcccCc
Q 009373 160 AVLTVFVLAS--AKLLFTSGYDSIVRMWHLEDGFSIASSKPLG-CTIRAVAADKKLLVAGGTDG----F-IHCWRAVEVL 231 (536)
Q Consensus 160 ~V~~v~~~~~--~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~l~sg~~dg----~-i~vwd~~~~~ 231 (536)
....|+++|+ +..|+.+...+.|+.++..++.......... ..-+++.++++ |+.+...+ . +...+...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~- 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG- 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT-
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC-
Confidence 4568899984 3445555444899999998776655443222 33456678888 44444322 1 222222111
Q ss_pred cceecccCcccccceEEeeCCccCEEEEEEe--CCEEE-EEecCCeEEEEeCCCceEeEee-e--ccccE--EEEeecCC
Q 009373 232 PHLFDISGSEKQNTQFRLWEHEGPITSLALD--LTRIY-SGSWDMTVRVWDRALLKCLKVL-R--HSDWV--YGLAPHDT 303 (536)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~-s~s~dg~i~iwd~~~~~~~~~~-~--~~~~v--~~~~~~~~ 303 (536)
......+. .......++++ ...|+ +-..++.|+.+|..++.....+ . ....- .++.++++
T Consensus 218 -----------~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~ 285 (433)
T 4hw6_A 218 -----------FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGD 285 (433)
T ss_dssp -----------TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSS
T ss_pred -----------eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCC
Confidence 00001111 12223445663 34444 4446788999999877653222 2 11122 45558888
Q ss_pred EEEEec--CCcEEEEeCC--CCcE--EEEEcc-----c---------cccceEEEEE---------eCCCCEEEEEcCCC
Q 009373 304 TVASTS--GSDVYIWDTN--SGCL--LTVVNG-----A---------HVGNTKSLAR---------SHTGDFLFTGGEDG 354 (536)
Q Consensus 304 ~l~~~~--d~~i~i~d~~--~~~~--~~~~~~-----~---------~~~~i~~l~~---------~~~~~~l~tg~~dg 354 (536)
.|+.+. .+.|+.++.. ++.. ...+.. + .-.....+++ .++|.+.++-...+
T Consensus 286 ~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~ 365 (433)
T 4hw6_A 286 WAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSH 365 (433)
T ss_dssp EEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTT
T ss_pred EEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCC
Confidence 554444 5789998765 3321 112110 0 1124677898 77777777777788
Q ss_pred cEEEEEc
Q 009373 355 AIHMYEI 361 (536)
Q Consensus 355 ~i~iwd~ 361 (536)
.|+.++.
T Consensus 366 ~I~~~~~ 372 (433)
T 4hw6_A 366 TVRVLTP 372 (433)
T ss_dssp EEEEECT
T ss_pred EEEEECC
Confidence 8999984
No 300
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.01 E-value=0.21 Score=46.19 Aligned_cols=217 Identities=11% Similarity=-0.058 Sum_probs=119.4
Q ss_pred CcEEEEECCCCceeeeeCCCCc-eEEEEecCCC-EEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEE
Q 009373 180 SIVRMWHLEDGFSIASSKPLGC-TIRAVAADKK-LLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPIT 257 (536)
Q Consensus 180 g~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 257 (536)
..|+..|+.+.+....+..... .-.++.+.++ ++++-..++.|..+++.+... + ......+........
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~------~---~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------V---SSYDTVISRDIQAPD 80 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------------CEEEECSSCSCCC
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCC------C---cccEEEEeCCCCCcC
Confidence 5688889887765544433222 2344555554 445555568898888764100 0 001111211223345
Q ss_pred EEEEe--CCEE-EEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecCCEE-EEec-C-CcEEEEeCCCCcEEEEEc
Q 009373 258 SLALD--LTRI-YSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHDTTV-ASTS-G-SDVYIWDTNSGCLLTVVN 328 (536)
Q Consensus 258 ~l~~~--~~~l-~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~~~l-~~~~-d-~~i~i~d~~~~~~~~~~~ 328 (536)
.++++ ++.| ++-...+.|.+.|+........+. .......++ |.+..+ ++.. . +.|..+++... ....+.
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~ 159 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLV 159 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEE
Confidence 66763 4445 454667899999987544333333 223445555 544544 4443 3 67888887543 333332
Q ss_pred cccccceEEEEEeCCCCEEEEE-cCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEEe-CCCcEEEEE
Q 009373 329 GAHVGNTKSLARSHTGDFLFTG-GEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAA-GDGKLSLID 406 (536)
Q Consensus 329 ~~~~~~i~~l~~~~~~~~l~tg-~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s-~dg~i~vwd 406 (536)
.......+.++++|++..|..+ +..+.|..+|+..... ..+...........+|+++...|+.+. ..+.|..+|
T Consensus 160 ~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~----~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 160 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR----KTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce----EEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEe
Confidence 2234568899999877665544 4567899999875321 222222122345677887766555554 467888888
Q ss_pred CCcc
Q 009373 407 VRKL 410 (536)
Q Consensus 407 ~~~~ 410 (536)
..++
T Consensus 236 ~~~g 239 (316)
T 1ijq_A 236 RLTG 239 (316)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 7553
No 301
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.01 E-value=0.16 Score=46.94 Aligned_cols=179 Identities=10% Similarity=-0.034 Sum_probs=90.9
Q ss_pred EEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCC-ccCEEEEEE-eCCEEEEEec----C-------CeEEEE
Q 009373 212 LLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEH-EGPITSLAL-DLTRIYSGSW----D-------MTVRVW 278 (536)
Q Consensus 212 ~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~-~~~~l~s~s~----d-------g~i~iw 278 (536)
+++.|+ ..+.+||..++.-.. ..+... ...-.+++. ++..++.|+. + ..+..|
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~------------~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~ 72 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC------------ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQF 72 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE------------EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEE
T ss_pred EEEEcC--CceEEECCCCCeEec------------CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEe
Confidence 344555 578889987754211 111111 111222333 6777777774 1 127788
Q ss_pred eCCCceEeEeeeccc---cEEEEeecCCEEEEec-C--------CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCE
Q 009373 279 DRALLKCLKVLRHSD---WVYGLAPHDTTVASTS-G--------SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDF 346 (536)
Q Consensus 279 d~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~-d--------~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 346 (536)
|..+.+-...-.... .-..+..++.+++.|+ + ..+.+||+.+++-...-.......-.+++. .++++
T Consensus 73 d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i 151 (315)
T 4asc_A 73 DHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLV 151 (315)
T ss_dssp ETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEE
T ss_pred cCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEE
Confidence 988765432211111 1112224666666665 2 459999998875432211111111112222 35667
Q ss_pred EEEEcC-C-----CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEEeCCC-----cEEEEECCc
Q 009373 347 LFTGGE-D-----GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAAGDG-----KLSLIDVRK 409 (536)
Q Consensus 347 l~tg~~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg-----~i~vwd~~~ 409 (536)
++.|+. + ..+.+||+.+..= ..+..+......-.++.+++..++.|+.++ .+.+||+.+
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~~~~W----~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPKKFEW----KELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETTTTEE----EECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred EEEeCCCCCCcccceEEEEeCCCCeE----EECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCC
Confidence 777765 2 3588999876521 222222222222334455667777777654 478888876
No 302
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.98 E-value=0.3 Score=47.44 Aligned_cols=147 Identities=9% Similarity=0.024 Sum_probs=81.5
Q ss_pred cEEEEEEec-CCCEEEEEeCCCcEEEEECCCCceeeeeCCCC-ceEEEEecCCCEEEEEeC-CC----cEEEEEcccCcc
Q 009373 160 AVLTVFVLA-SAKLLFTSGYDSIVRMWHLEDGFSIASSKPLG-CTIRAVAADKKLLVAGGT-DG----FIHCWRAVEVLP 232 (536)
Q Consensus 160 ~V~~v~~~~-~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~l~sg~~-dg----~i~vwd~~~~~~ 232 (536)
....|+++| ++..|+.+...+.|+.+|++++.......... ..-+++.++++.|+++.. ++ .+...+. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~- 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG- 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT-
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc-
Confidence 456889998 45556666555889999998765444333322 334566788886666554 22 2333332 221
Q ss_pred ceecccCcccccceEEeeCCccCEEEEEEe---CCEEEEEecCCeEEEEeCCCceEeEeee--ccccEE--EEeecCCEE
Q 009373 233 HLFDISGSEKQNTQFRLWEHEGPITSLALD---LTRIYSGSWDMTVRVWDRALLKCLKVLR--HSDWVY--GLAPHDTTV 305 (536)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~v~--~~~~~~~~l 305 (536)
......+.. ......++++ +..+++-..++.|..++..++....... ...... ++.++++++
T Consensus 216 ----------~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~l 284 (430)
T 3tc9_A 216 ----------FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYA 284 (430)
T ss_dssp ----------SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEE
T ss_pred ----------eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEE
Confidence 110011111 1223455663 3444454567899999998766533332 222333 444888855
Q ss_pred EEe-c-CCcEEEEeCC
Q 009373 306 AST-S-GSDVYIWDTN 319 (536)
Q Consensus 306 ~~~-~-d~~i~i~d~~ 319 (536)
+.+ . .+.|..++..
T Consensus 285 yv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 285 YIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEETTTTEEEEEEEE
T ss_pred EEEECCCCEEEEEeCC
Confidence 444 4 6789988765
No 303
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.94 E-value=0.25 Score=45.76 Aligned_cols=213 Identities=10% Similarity=-0.073 Sum_probs=116.0
Q ss_pred CCcEEEEECCCCc--eeeeeCCC-CceEEEEecC-CCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCcc
Q 009373 179 DSIVRMWHLEDGF--SIASSKPL-GCTIRAVAAD-KKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEG 254 (536)
Q Consensus 179 dg~v~iwd~~~~~--~~~~~~~~-~~~v~~~~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 254 (536)
...|+..+++... ....+... ....+++.+. +.++++-...+.|..+++..... ....+.....
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~------------~~~~~~~~l~ 79 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES------------VQNVVVSGLL 79 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC------------CCEEEEECCS
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc------------eEEEEcCCCC
Confidence 4678888887653 11111111 1122344443 44555555677888888755420 0111111123
Q ss_pred CEEEEEEe--CCE-EEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecCCEEEEec---CCcEEEEeCCCCcEEE
Q 009373 255 PITSLALD--LTR-IYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHDTTVASTS---GSDVYIWDTNSGCLLT 325 (536)
Q Consensus 255 ~v~~l~~~--~~~-l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~~~l~~~~---d~~i~i~d~~~~~~~~ 325 (536)
....++++ ++. +++-...+.|.++++........+. .......++ |.+..++.+. .+.|..+++..... .
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~ 158 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-F 158 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-E
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-E
Confidence 34456663 444 4455567889999987543322222 223345554 5444444433 46788888764332 2
Q ss_pred EEccccccceEEEEEeCCCCEEEE-EcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEE-eCCCcEE
Q 009373 326 VVNGAHVGNTKSLARSHTGDFLFT-GGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSA-AGDGKLS 403 (536)
Q Consensus 326 ~~~~~~~~~i~~l~~~~~~~~l~t-g~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~-s~dg~i~ 403 (536)
.+....-...+.++++|++..|.. -+..+.|..+|+..... ..+ ..+......+++++.+.++.+ ...+.|.
T Consensus 159 ~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~----~~~--~~~~~~~P~glav~~~~lywtd~~~~~V~ 232 (318)
T 3sov_A 159 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR----QAV--VKGSLPHPFALTLFEDILYWTDWSTHSIL 232 (318)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEE--ECSCCSCEEEEEEETTEEEEEETTTTEEE
T ss_pred EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce----EEE--ecCCCCCceEEEEeCCEEEEEecCCCeEE
Confidence 222223446789999996665554 45568899999865421 111 122345567888876555544 4567888
Q ss_pred EEECCcc
Q 009373 404 LIDVRKL 410 (536)
Q Consensus 404 vwd~~~~ 410 (536)
.+|..++
T Consensus 233 ~~~~~~G 239 (318)
T 3sov_A 233 ACNKYTG 239 (318)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 8888654
No 304
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.87 E-value=0.6 Score=49.09 Aligned_cols=199 Identities=14% Similarity=0.013 Sum_probs=110.5
Q ss_pred CCccCEEEEEEe--CCEEE-EEecCCeEEEEeCCCc----eEeEeee-ccccEEEEe--ecCC-EEEEec-CCcEEEEeC
Q 009373 251 EHEGPITSLALD--LTRIY-SGSWDMTVRVWDRALL----KCLKVLR-HSDWVYGLA--PHDT-TVASTS-GSDVYIWDT 318 (536)
Q Consensus 251 ~h~~~v~~l~~~--~~~l~-s~s~dg~i~iwd~~~~----~~~~~~~-~~~~v~~~~--~~~~-~l~~~~-d~~i~i~d~ 318 (536)
.....+..++++ .+.|+ +-...+.|+.+++... .....+. .......|+ +.+. ++++-. .+.|.+.++
T Consensus 421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeC
Confidence 345567788884 34444 4455678888888653 1222222 222333444 5554 444444 688999998
Q ss_pred CCCcEEEEEccccccceEEEEEeCCCCEEEEEcC-C-CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEE
Q 009373 319 NSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGE-D-GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLV 394 (536)
Q Consensus 319 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~-d-g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~ 394 (536)
........+ .........|+++|.+.+|+.... + +.|...++.... ........-...+.|++++ ..|+
T Consensus 501 dG~~~~~l~-~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~------~~~lv~~~l~~P~GLavD~~~~~LY 573 (791)
T 3m0c_C 501 KGVKRKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD------IYSLVTENIQWPNGITLDLLSGRLY 573 (791)
T ss_dssp TSSSEEEEE-ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC------EEEEECSSCSCEEEEEEETTTTEEE
T ss_pred CCCeEEEEE-eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc------eEEEEeCCCCCceEEEEecCCCeEE
Confidence 765443333 234456889999998665555442 2 678888876542 1122223345778999984 5666
Q ss_pred EEeC-CCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC-EEEEecCCCeEEEEeCCchhhH
Q 009373 395 SAAG-DGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD-RIVCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 395 s~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~sg~~Dg~i~vW~~~~~~~~ 472 (536)
.+.. .+.|...++...... .+... .+.-..-++++..++ ++++-...+.|...+..+|..+
T Consensus 574 waD~~~~~I~~~d~dG~~~~----------~v~~~-------~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 574 WVDSKLHSISSIDVNGGNRK----------TILED-------EKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp EEETTTTEEEEEETTSCSCE----------EEEEC-------TTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCC
T ss_pred EEeCCCCcEEEEecCCCceE----------EEecC-------CCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcce
Confidence 6654 567888887542110 01000 011112335555555 5556666788888887666544
Q ss_pred H
Q 009373 473 E 473 (536)
Q Consensus 473 ~ 473 (536)
.
T Consensus 637 ~ 637 (791)
T 3m0c_C 637 N 637 (791)
T ss_dssp E
T ss_pred E
Confidence 3
No 305
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.84 E-value=0.3 Score=45.30 Aligned_cols=181 Identities=15% Similarity=0.195 Sum_probs=105.9
Q ss_pred cCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE------eCCE--EEEEe--c--CCeE
Q 009373 208 ADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL------DLTR--IYSGS--W--DMTV 275 (536)
Q Consensus 208 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~------~~~~--l~s~s--~--dg~i 275 (536)
|....++.....+-+.+||+ +++ .+..+.. +.+..+.. .++. ++.++ . +++|
T Consensus 38 p~~s~ii~t~k~~gL~Vydl-~G~-------------~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l 101 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSL-DGK-------------MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTI 101 (355)
T ss_dssp GGGCEEEEEETTTEEEEEET-TSC-------------EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEE
T ss_pred CCccEEEEEcCCCCEEEEcC-CCc-------------EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeE
Confidence 34556777777889999999 442 2222322 34555444 2222 33333 3 5789
Q ss_pred EEEeC--CCceEeEeeec---c-----ccEE--EE--ee-cCC-EEEEec-CCcEEEEeCC-------CCcEEEEEcccc
Q 009373 276 RVWDR--ALLKCLKVLRH---S-----DWVY--GL--AP-HDT-TVASTS-GSDVYIWDTN-------SGCLLTVVNGAH 331 (536)
Q Consensus 276 ~iwd~--~~~~~~~~~~~---~-----~~v~--~~--~~-~~~-~l~~~~-d~~i~i~d~~-------~~~~~~~~~~~~ 331 (536)
.+|++ .++. +..+.. . ..++ |+ .+ .+. ++++.. +|.+..|++. +.+.++++. .
T Consensus 102 ~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~--l 178 (355)
T 3amr_A 102 EIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK--M 178 (355)
T ss_dssp EEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE--C
T ss_pred EEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec--C
Confidence 99966 3433 333311 1 2333 33 23 344 344444 7899888882 345677775 4
Q ss_pred ccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeec-cCC-CCCeEEEEEc--C---CeEEEEe-CCCcEE
Q 009373 332 VGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATW-IPH-TGPVNSLAFE--F---PWLVSAA-GDGKLS 403 (536)
Q Consensus 332 ~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~-~~h-~~~v~~l~~~--~---~~l~s~s-~dg~i~ 403 (536)
.+.+..+...+....|+.+-++.-|..|+...... .....+... .++ ...+..|+.- + .+|++++ .+++..
T Consensus 179 gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~-~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~ 257 (355)
T 3amr_A 179 NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGG-SNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYA 257 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSC-SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEE
T ss_pred CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCC-CCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEE
Confidence 56788999999999999999986665555432210 111233333 122 2367888873 2 3777777 577999
Q ss_pred EEECC
Q 009373 404 LIDVR 408 (536)
Q Consensus 404 vwd~~ 408 (536)
|||..
T Consensus 258 Vydr~ 262 (355)
T 3amr_A 258 IYDRQ 262 (355)
T ss_dssp EEESS
T ss_pred EEECC
Confidence 99996
No 306
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.83 E-value=0.48 Score=52.19 Aligned_cols=142 Identities=14% Similarity=0.093 Sum_probs=93.6
Q ss_pred CEEEEEe----------cCCeEEEEeCCCceEe--EeeeccccEEEEeecCCEEEEecCCcEEEEeCCCCcEEEEEcccc
Q 009373 264 TRIYSGS----------WDMTVRVWDRALLKCL--KVLRHSDWVYGLAPHDTTVASTSGSDVYIWDTNSGCLLTVVNGAH 331 (536)
Q Consensus 264 ~~l~s~s----------~dg~i~iwd~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~d~~i~i~d~~~~~~~~~~~~~~ 331 (536)
.+++.|+ ..|.|.+|++..++.. ......+.|++++.-+.+|+++-+.+|++|++...+.+. ....+
T Consensus 845 ~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig~~l~vy~l~~~~~L~-~~~~~ 923 (1158)
T 3ei3_A 845 TYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNH 923 (1158)
T ss_dssp CEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEETTEEEEEEECTTSCEE-EEEEE
T ss_pred EEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcCCEEEEEECCCCceEE-EEeec
Confidence 6787776 3478999998644433 233377899999955557777778999999998766444 21112
Q ss_pred ccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEE-cCCeEEEEeCCCcEEEEECCc
Q 009373 332 VGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAF-EFPWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 332 ~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~dg~i~vwd~~~ 409 (536)
-..|..+.....++++++|..-..|.++..+... ..+..+. -..+...++++.+ +.+.++.+..+|.|.+.....
T Consensus 924 ~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~--~~L~~~a-~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 924 YNNIMALYLKTKGDFILVGDLMRSVLLLAYKPME--GNFEEIA-RDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp CCCSCEEEEEEETTEEEEEESSBCEEEEEEETTT--TEEEEEE-ECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred cccEEEEEEeccCCEEEEEEhhheEEEEEEEcCC--CeEEEEE-eecccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence 2223333333457899999888888887665431 1111221 1234556788877 567889999999999988764
No 307
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.83 E-value=0.38 Score=46.20 Aligned_cols=196 Identities=11% Similarity=0.088 Sum_probs=110.6
Q ss_pred eCccccEEEEEEecCCC-EEEEEeCCCcEEEEECCCCc----eeeeeCC--CCceEEEEec-CCCEEEEEeCCCcEEEEE
Q 009373 155 YGHTEAVLTVFVLASAK-LLFTSGYDSIVRMWHLEDGF----SIASSKP--LGCTIRAVAA-DKKLLVAGGTDGFIHCWR 226 (536)
Q Consensus 155 ~~h~~~V~~v~~~~~~~-~l~sgs~dg~v~iwd~~~~~----~~~~~~~--~~~~v~~~~~-~~~~l~sg~~dg~i~vwd 226 (536)
......+..++|++.+. ++++-...+.|+.+++.... ....... ....-+++.+ .+++.++-...+.|.+.+
T Consensus 108 ~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 108 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEe
Confidence 34456788999998655 44555567889999987521 2222221 2223345555 455555556678888888
Q ss_pred cccCccceecccCcccccceEEeeCCccCEEEEEEe--CCEEEEEec--CCeEEEEeCCCceEeEeee-ccccEEEEe--
Q 009373 227 AVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALD--LTRIYSGSW--DMTVRVWDRALLKCLKVLR-HSDWVYGLA-- 299 (536)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~--dg~i~iwd~~~~~~~~~~~-~~~~v~~~~-- 299 (536)
+.... ....+.........|+++ ++.|+.... .+.|...++........+. .-.....++
T Consensus 188 ~~g~~-------------~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd 254 (400)
T 3p5b_L 188 TKGVK-------------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLD 254 (400)
T ss_dssp TTTCS-------------EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEE
T ss_pred CCCCc-------------eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEE
Confidence 75432 111222233456788885 355655542 3678888876443322222 223455555
Q ss_pred ecCCEEEEec--CCcEEEEeCCCCcEEEEEcc-ccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccC
Q 009373 300 PHDTTVASTS--GSDVYIWDTNSGCLLTVVNG-AHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIIND 364 (536)
Q Consensus 300 ~~~~~l~~~~--d~~i~i~d~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~ 364 (536)
+.+..|+.+. .+.|..+|+........... +......++++. .+.++++-...+.|..+|..++
T Consensus 255 ~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 255 LLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSC
T ss_pred eCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCC
Confidence 5555555544 57899999875433322221 123445677774 3456666677788988886666
No 308
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.81 E-value=0.035 Score=51.59 Aligned_cols=244 Identities=10% Similarity=0.014 Sum_probs=120.2
Q ss_pred CEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEE--ecCCeEEEEeCCCceEeEe
Q 009373 211 KLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSG--SWDMTVRVWDRALLKCLKV 288 (536)
Q Consensus 211 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~--s~dg~i~iwd~~~~~~~~~ 288 (536)
..+++++.||.|.-.|..+|+.. +..... ...+.......... .++.++.+ +.||.|..+|..+|.....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~-W~~~~~-~~~p~~~~~~~~~~------~~~~~~vv~p~~dG~l~a~~~~~G~~~~~ 82 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHII-WSIEPE-NFQPLIEIQEPSRL------ETYETLIIEPFGDGNIYYFNAHQGLQKLP 82 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEE-EEECGG-GSCCSEECCCSCTT------TSSEEEEECCSTTTEEEEEETTTEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEE-EEecCC-ccCCcEEecCCccc------cCCcEEEEEECCCCEEEEEECCCCcEEee
Confidence 46778888888888887776421 111110 00011111111110 12234333 6899999999998866655
Q ss_pred eec-----cccEEEEe----e-------cCCEEEEec-CCcEEEEeCCCCcEEEEEccccccc------eEEEEEe----
Q 009373 289 LRH-----SDWVYGLA----P-------HDTTVASTS-GSDVYIWDTNSGCLLTVVNGAHVGN------TKSLARS---- 341 (536)
Q Consensus 289 ~~~-----~~~v~~~~----~-------~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~------i~~l~~~---- 341 (536)
+.. ..++.. . . .+..+++++ ++.+...|+++|+.+..+..+.... ..|....
T Consensus 83 ~~~~~lv~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~ 161 (339)
T 2be1_A 83 LSIRQLVSTSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKL 161 (339)
T ss_dssp EEHHHHHTTCSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC-----------------
T ss_pred eccccceecccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCccccccccccccccccccc
Confidence 542 122221 1 1 445566666 8999999999999999986432211 0111110
Q ss_pred -CCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCC--eE---EEEEcCCeEEEEeCCCcEEEEECCcccccC-
Q 009373 342 -HTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGP--VN---SLAFEFPWLVSAAGDGKLSLIDVRKLLRSG- 414 (536)
Q Consensus 342 -~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~--v~---~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~- 414 (536)
..+..++.|..+..+.+.+ +++. .-. ........+... +. .+.-+ ..++.++.||.|.-+|..++...+
T Consensus 162 d~~~~~v~ig~~~y~v~~~~-~sG~-~W~-~~~s~~~~~~~~~~~~~~~~~s~D-g~~~~~~~dg~v~A~d~~~G~~~W~ 237 (339)
T 2be1_A 162 QECENMIVIGKTIFELGIHS-YDGA-SYN-VTYSTWQQNVLDVPLALQNTFSKD-GMCIAPFRDKSLLASDLDFRIARWV 237 (339)
T ss_dssp ---CCEEEEEEEEEECEECC-TTSC-CCC-CEEEEEECCTTTHHHHTTCSSCSS-SCCEEEETTTEEEEECSTTCCEEEE
T ss_pred ccCCCeEEEecceEEEEEEC-CCCC-eEE-EecccccccccccccccccccccC-CcEEEECCCCEEEEEECCCCcEEEE
Confidence 1235677777766666655 3331 000 001111111000 00 00001 233567889999999988877766
Q ss_pred CCCCCCceeeEEeeCCCeeeecc-ccccEEEEEe----------cCCEEEEecCCCeEEEEeCCchhhH
Q 009373 415 RPTSGKRVSRVIEVEPPQRMLHG-FECNLLSVDI----------GADRIVCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~----------~~~~l~sg~~Dg~i~vW~~~~~~~~ 472 (536)
.......+....... .+. ....+.--.| ++..++--..||.++-+.......+
T Consensus 238 ~~~l~sPv~~~~dv~-----~~~~~g~~v~~~~P~~~~~~~~~~~~~v~v~~t~~G~~~Als~~~yp~~ 301 (339)
T 2be1_A 238 SPTFPGIIVGLFDVF-----NDLRTNENILVPHPFNPGDHESISSNKVYLDQTSNLSWFALSSQNFPSL 301 (339)
T ss_dssp CCCCSSCEEEEEEEE-----EETTTTEEEEEECCCCC--------CCEEEEECTTCCEEEEETTTCHHH
T ss_pred eecCCCCeEEEEEEE-----EecCCCCEEEecCCCcccccccccCCeEEEEECCCCcEEEecCCCCcee
Confidence 443333332222111 010 0111211112 2334454677999999998765444
No 309
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.80 E-value=0.17 Score=53.18 Aligned_cols=186 Identities=11% Similarity=0.097 Sum_probs=97.5
Q ss_pred eCCEEEEEec-C----CeEEEEeCCCc-eEeEe-eeccccEEEEeecCCEEEEec-C-----CcEEEEeCCCCcE--EEE
Q 009373 262 DLTRIYSGSW-D----MTVRVWDRALL-KCLKV-LRHSDWVYGLAPHDTTVASTS-G-----SDVYIWDTNSGCL--LTV 326 (536)
Q Consensus 262 ~~~~l~s~s~-d----g~i~iwd~~~~-~~~~~-~~~~~~v~~~~~~~~~l~~~~-d-----~~i~i~d~~~~~~--~~~ 326 (536)
|+++|+.+.. + .+|+++|+.++ +.+.. +.....-...+++++.|+... + ..|.++++.++.. ...
T Consensus 185 DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv 264 (751)
T 2xe4_A 185 EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCL 264 (751)
T ss_dssp TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEE
T ss_pred CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEE
Confidence 3455554332 2 35999999988 63221 111111123458887776655 4 2588889887642 223
Q ss_pred EccccccceEEEEEeCCCCEEEEEcC---CCcEEEEEcccCccccccceeeeccCCCCCeEEEEEc-CCeEEEEe-CC--
Q 009373 327 VNGAHVGNTKSLARSHTGDFLFTGGE---DGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFE-FPWLVSAA-GD-- 399 (536)
Q Consensus 327 ~~~~~~~~i~~l~~~~~~~~l~tg~~---dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s-~d-- 399 (536)
+..........+.|+|||++|+..+. ...|.++|+.++.. ................++.|+ ++.|+..+ .+
T Consensus 265 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~--~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a 342 (751)
T 2xe4_A 265 YEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA--HNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGA 342 (751)
T ss_dssp EECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT--CCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTC
T ss_pred EecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC--CceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCC
Confidence 32223344567899999998876553 34578888876521 010011122345566777753 45554443 33
Q ss_pred --CcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC-EEEEecCCCeEEEEe
Q 009373 400 --GKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD-RIVCGGEEGIVRIWN 465 (536)
Q Consensus 400 --g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~sg~~Dg~i~vW~ 465 (536)
..|..+|+.+... +. . ....+.....+..+.+.++ .+++...||..++|-
T Consensus 343 ~~~~L~~~d~~~~~~-~~--------~-------~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 343 VNHKLLIAPRGQPSD-WS--------H-------VLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp TTCEEEEEETTSTTC-CC--------C-------EEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEE
T ss_pred CCcEEEEEcCCCccc-ce--------e-------eEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEE
Confidence 2566666653200 00 0 0001112224455666666 566777788655543
No 310
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.76 E-value=0.16 Score=47.96 Aligned_cols=226 Identities=12% Similarity=0.010 Sum_probs=110.8
Q ss_pred CCCEEEEEeCC-CcEEEEECCC--C--ceeeeeC-CCCceEEEEecCCCEEEEEeC-C---------CcEEEEEcccCcc
Q 009373 169 SAKLLFTSGYD-SIVRMWHLED--G--FSIASSK-PLGCTIRAVAADKKLLVAGGT-D---------GFIHCWRAVEVLP 232 (536)
Q Consensus 169 ~~~~l~sgs~d-g~v~iwd~~~--~--~~~~~~~-~~~~~v~~~~~~~~~l~sg~~-d---------g~i~vwd~~~~~~ 232 (536)
++.+++.|+.+ ..+.+||+.+ . ..+..+. .......+...++.+++.|+. + ..+.+||+.+..-
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 56666776643 5688899864 2 1222222 112222233356777777776 2 4688888876532
Q ss_pred ceecccCcccccceEEee-CCccCEEEEEEeCCEEEEEecC---------------------------------------
Q 009373 233 HLFDISGSEKQNTQFRLW-EHEGPITSLALDLTRIYSGSWD--------------------------------------- 272 (536)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~l~s~s~d--------------------------------------- 272 (536)
.. ..... .....-.++..++..++.|+.+
T Consensus 99 ~~-----------~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (357)
T 2uvk_A 99 VK-----------LMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFN 167 (357)
T ss_dssp EE-----------CSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCC
T ss_pred EE-----------CCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCc
Confidence 11 11111 1112222334577777777754
Q ss_pred CeEEEEeCCCceEeEeee--cccc--EEEEeecCCEEEEec-C------CcEEEEeC--CCCcEEEEEccccc-cceEEE
Q 009373 273 MTVRVWDRALLKCLKVLR--HSDW--VYGLAPHDTTVASTS-G------SDVYIWDT--NSGCLLTVVNGAHV-GNTKSL 338 (536)
Q Consensus 273 g~i~iwd~~~~~~~~~~~--~~~~--v~~~~~~~~~l~~~~-d------~~i~i~d~--~~~~~~~~~~~~~~-~~i~~l 338 (536)
..+.+||..+.+-...-. .... ...+..++++++.|+ + ..+.+||+ .+.+-...-..... ......
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~ 247 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGF 247 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCE
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccce
Confidence 578999988765433322 1111 222335666666655 2 35778887 44432221110011 111111
Q ss_pred EEeCCCCEEEEEcCC----------------------CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEE
Q 009373 339 ARSHTGDFLFTGGED----------------------GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSA 396 (536)
Q Consensus 339 ~~~~~~~~l~tg~~d----------------------g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~ 396 (536)
+...++.+++.|+.+ ..+.+||+.+.. ...+..+......-.++.+.+..++.|
T Consensus 248 ~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~~~~~~~~~~~i~v~G 323 (357)
T 2uvk_A 248 AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK----WDKSGELSQGRAYGVSLPWNNSLLIIG 323 (357)
T ss_dssp EEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-------CEEEEECSSCCBSSEEEEETTEEEEEE
T ss_pred EEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc----eeeCCCCCCCcccceeEEeCCEEEEEe
Confidence 222356777777632 247789987652 223333332223334455667778888
Q ss_pred eCCC------cEEEEECCc
Q 009373 397 AGDG------KLSLIDVRK 409 (536)
Q Consensus 397 s~dg------~i~vwd~~~ 409 (536)
+.++ .|.++++++
T Consensus 324 G~~~~~~~~~~v~~l~~~~ 342 (357)
T 2uvk_A 324 GETAGGKAVTDSVLITVKD 342 (357)
T ss_dssp EECGGGCEEEEEEEEEC-C
T ss_pred eeCCCCCEeeeEEEEEEcC
Confidence 8653 344556665
No 311
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.71 E-value=0.78 Score=48.29 Aligned_cols=226 Identities=12% Similarity=0.096 Sum_probs=130.0
Q ss_pred cccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeee-CCCCceEEEEe-cCCCEEEEEeCCCcEEEEEcccCcccee
Q 009373 158 TEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASS-KPLGCTIRAVA-ADKKLLVAGGTDGFIHCWRAVEVLPHLF 235 (536)
Q Consensus 158 ~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~-~~~~~~v~~~~-~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 235 (536)
...|.+|.-..+|. |..|..+| +..||-..-+..... ......|.++. .....|..|+.+| +..||..+...
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f--- 94 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRY--- 94 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTTEEEEEETTE-EEEEETTTTEE---
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEE---
Confidence 56799998877665 55667777 445663221111110 11234577765 3445778887765 77888765421
Q ss_pred cccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEeee-----ccccEEEEe--ecCCEEEEe
Q 009373 236 DISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVLR-----HSDWVYGLA--PHDTTVAST 308 (536)
Q Consensus 236 ~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-----~~~~v~~~~--~~~~~l~~~ 308 (536)
.. ........|.++..+.+.|..++.+ .+..+|..+++...... ....|.++. .++.+.++
T Consensus 95 ~~----------~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig- 162 (758)
T 3ott_A 95 EQ----------PETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVG- 162 (758)
T ss_dssp CC----------CSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEE-
T ss_pred EC----------cccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEE-
Confidence 00 0001123577766666677777766 68889987765433211 234577776 35555554
Q ss_pred cCCcEEEEeCCCCcEEEEEccc----cccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeE
Q 009373 309 SGSDVYIWDTNSGCLLTVVNGA----HVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVN 384 (536)
Q Consensus 309 ~d~~i~i~d~~~~~~~~~~~~~----~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~ 384 (536)
+.+.+..||..+++........ ....|.++...+++..|..|+. +-+..+|..+... .....+ ....|.
T Consensus 163 t~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~----~~~~~l--~~~~i~ 235 (758)
T 3ott_A 163 TYNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQI----KQTEAF--HNNSIK 235 (758)
T ss_dssp ETTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEE----EEEEEE--EEEEEE
T ss_pred eCCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeE----EeccCC--CCCeEE
Confidence 4456888998776543221111 1224888888877776666664 4588888766521 111111 234578
Q ss_pred EEEEcC-CeEEEEeCCCcEEEEECCc
Q 009373 385 SLAFEF-PWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 385 ~l~~~~-~~l~s~s~dg~i~vwd~~~ 409 (536)
++..+. ..|..|+.+ -+.+++..+
T Consensus 236 ~i~~d~~g~lWigT~~-Gl~~~~~~~ 260 (758)
T 3ott_A 236 SLALDGNGDLLAGTDN-GLYVYHNDT 260 (758)
T ss_dssp EEEECTTCCEEEEETT-EEEEECCTT
T ss_pred EEEEcCCCCEEEEeCC-ceeEEecCC
Confidence 888764 567777754 578888765
No 312
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.66 E-value=0.00082 Score=69.01 Aligned_cols=37 Identities=14% Similarity=0.277 Sum_probs=29.6
Q ss_pred cccccCCcHHHHHHHhcCCC-hhhHHHHhhhhHHHHHH
Q 009373 61 RSTITDLPPALISEILNCLD-PKELGIVSCVSPILHRL 97 (536)
Q Consensus 61 ~~~l~~Lp~ei~~~I~~~L~-~~~l~~~~~v~~~~~~l 97 (536)
.|.+..||+|++.+||+||+ .+++.++++|||+|+.+
T Consensus 3 ~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 3 KRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred ccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 46788999999999999999 99999999999999998
No 313
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.64 E-value=0.86 Score=47.87 Aligned_cols=195 Identities=11% Similarity=0.080 Sum_probs=109.5
Q ss_pred CccccEEEEEEecCC-CEEEEEeCCCcEEEEECCCC----ceeeeeC--CCCceEEEEecCC-CEEEEEeCCCcEEEEEc
Q 009373 156 GHTEAVLTVFVLASA-KLLFTSGYDSIVRMWHLEDG----FSIASSK--PLGCTIRAVAADK-KLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 156 ~h~~~V~~v~~~~~~-~~l~sgs~dg~v~iwd~~~~----~~~~~~~--~~~~~v~~~~~~~-~~l~sg~~dg~i~vwd~ 227 (536)
.....+..|+|++.. .++++-...+.|+.+++... .....+. .....-+++.+.+ +++++-...+.|.+.++
T Consensus 421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeC
Confidence 344567789999854 45555566788999998753 1122222 1223345666555 45555556788888887
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEEeC--CEEEEEec-C-CeEEEEeCCCceEeEeee-ccccEEEEe--e
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDL--TRIYSGSW-D-MTVRVWDRALLKCLKVLR-HSDWVYGLA--P 300 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~-d-g~i~iwd~~~~~~~~~~~-~~~~v~~~~--~ 300 (536)
.... ....+.........|++++ +.|+.+.. . +.|...++........+. .-.....|+ +
T Consensus 501 dG~~-------------~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~ 567 (791)
T 3m0c_C 501 KGVK-------------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDL 567 (791)
T ss_dssp TSSS-------------EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEET
T ss_pred CCCe-------------EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEec
Confidence 5432 1111223344578888853 56665543 2 678888886544433333 224556665 4
Q ss_pred cCCEEEEec--CCcEEEEeCCCCcEEEEEcc-ccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccC
Q 009373 301 HDTTVASTS--GSDVYIWDTNSGCLLTVVNG-AHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIIND 364 (536)
Q Consensus 301 ~~~~l~~~~--d~~i~i~d~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~ 364 (536)
.+..|+.+. .+.|..+|+........+.. +......+|++.. +.++++-...+.|...|..++
T Consensus 568 ~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 568 LSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred CCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCC
Confidence 455554444 57899999865544333321 1223455666643 345555566677888886665
No 314
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.59 E-value=0.45 Score=43.92 Aligned_cols=143 Identities=10% Similarity=0.015 Sum_probs=73.1
Q ss_pred eCCEEEEEec----CC-------eEEEEeCCCceEeEeee--cc-ccEEEEeecCCEEEEec-C-------CcEEEEeCC
Q 009373 262 DLTRIYSGSW----DM-------TVRVWDRALLKCLKVLR--HS-DWVYGLAPHDTTVASTS-G-------SDVYIWDTN 319 (536)
Q Consensus 262 ~~~~l~s~s~----dg-------~i~iwd~~~~~~~~~~~--~~-~~v~~~~~~~~~l~~~~-d-------~~i~i~d~~ 319 (536)
++..++.|+. ++ .+..||..+.+-...-. .. ........++.+++.|+ + ..+.+||+.
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~ 135 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPV 135 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETT
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCC
Confidence 6677777773 12 27788887765433211 11 11122235666666665 3 248899998
Q ss_pred CCcEEEEEccccccceEEEEEeCCCCEEEEEcC------CCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeE
Q 009373 320 SGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGE------DGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWL 393 (536)
Q Consensus 320 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~------dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l 393 (536)
+.+-...-.......-.+++. .++.+++.|+. -..+.+||+.+.. ...+..+......-.++.++...+
T Consensus 136 ~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~~~~~~~~~~~iy 210 (318)
T 2woz_A 136 AAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD----WKDLAPMKTPRSMFGVAIHKGKIV 210 (318)
T ss_dssp TTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE----EEEECCCSSCCBSCEEEEETTEEE
T ss_pred CCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE----EEECCCCCCCcccceEEEECCEEE
Confidence 876443211111111112222 35677777764 2358899987762 122222222222223444566667
Q ss_pred EEEeCC-----CcEEEEECCc
Q 009373 394 VSAAGD-----GKLSLIDVRK 409 (536)
Q Consensus 394 ~s~s~d-----g~i~vwd~~~ 409 (536)
+.|+.+ ..+.+||+.+
T Consensus 211 v~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 211 IAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp EEEEEETTEEEEEEEEEETTT
T ss_pred EEcCcCCCCccceEEEEECCC
Confidence 777654 3467888775
No 315
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.58 E-value=0.6 Score=45.32 Aligned_cols=144 Identities=11% Similarity=-0.003 Sum_probs=79.1
Q ss_pred EEEecC--CCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCC-----e
Q 009373 204 RAVAAD--KKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDM-----T 274 (536)
Q Consensus 204 ~~~~~~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg-----~ 274 (536)
+++.++ +..|+.+...+.|+.++..++. +..+.........+++ +++ |+.+...+ .
T Consensus 144 vavd~~s~~g~Lyv~D~~~~I~~id~~~g~--------------v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~g 208 (433)
T 4hw6_A 144 MMFDPNSNYDDLYWVGQRDAFRHVDFVNQY--------------VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTG 208 (433)
T ss_dssp EEECTTTTTCEEEEECBTSCEEEEETTTTE--------------EEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEE
T ss_pred EEEccccCCCEEEEEeCCCCEEEEECCCCE--------------EEEeecCCCCccEEEECCCCC-EEEEcCCCCcccce
Confidence 445553 4455555555788888875542 2233334456788888 556 54444321 2
Q ss_pred EEEEeCCCceE-eEeeeccccE--EEEee-cCCEEEEec-CCcEEEEeCCCCcEEEEE-ccccccceEEEEEeCCCCE-E
Q 009373 275 VRVWDRALLKC-LKVLRHSDWV--YGLAP-HDTTVASTS-GSDVYIWDTNSGCLLTVV-NGAHVGNTKSLARSHTGDF-L 347 (536)
Q Consensus 275 i~iwd~~~~~~-~~~~~~~~~v--~~~~~-~~~~l~~~~-d~~i~i~d~~~~~~~~~~-~~~~~~~i~~l~~~~~~~~-l 347 (536)
+...+...+.. ...+...... .++.+ ++.++++.. ++.|+.+|..++.....+ ..+.......++++|+++. .
T Consensus 209 v~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LY 288 (433)
T 4hw6_A 209 IYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAY 288 (433)
T ss_dssp EEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEE
T ss_pred EEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEE
Confidence 33333221111 0111111111 23446 666666655 688999999877663322 2222233457999999984 4
Q ss_pred EEEcCCCcEEEEEcc
Q 009373 348 FTGGEDGAIHMYEII 362 (536)
Q Consensus 348 ~tg~~dg~i~iwd~~ 362 (536)
++-...+.|+.+++.
T Consensus 289 vad~~~~~I~~~~~d 303 (433)
T 4hw6_A 289 IIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEETTTTEEEEEEBC
T ss_pred EEeCCCCEEEEEeCC
Confidence 555567889998875
No 316
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.53 E-value=1 Score=47.38 Aligned_cols=227 Identities=14% Similarity=0.131 Sum_probs=128.5
Q ss_pred cccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecc
Q 009373 158 TEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDI 237 (536)
Q Consensus 158 ~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 237 (536)
...|.++....++ .|..|+.+| +..||..+.+...........|.++..+...|..|+.+ -+..++..++....+..
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~~~~ 138 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTSFDT 138 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEEECH
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEEecc
Confidence 3568888777655 566667665 78899877643321111223455555445567777766 57788876543211100
Q ss_pred cCcccccceEEeeCCccCEEEEEEe-CCEEEEEecCCeEEEEeCCCceEeEee-e-----ccccEEEEeec--CCEEEEe
Q 009373 238 SGSEKQNTQFRLWEHEGPITSLALD-LTRIYSGSWDMTVRVWDRALLKCLKVL-R-----HSDWVYGLAPH--DTTVAST 308 (536)
Q Consensus 238 ~~~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~-~-----~~~~v~~~~~~--~~~l~~~ 308 (536)
. ...-....|.++..+ .+.|..|+.+ -+..+|..+++..... . ....|.++..+ +..|..+
T Consensus 139 ~---------~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWig 208 (758)
T 3ott_A 139 R---------RNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIG 208 (758)
T ss_dssp H---------HHCCSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEE
T ss_pred C---------CCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEE
Confidence 0 000123468888774 4566666654 5778888776543211 1 12247777643 5555555
Q ss_pred cCCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeec-----cCCCCCe
Q 009373 309 SGSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATW-----IPHTGPV 383 (536)
Q Consensus 309 ~d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~h~~~v 383 (536)
+++.+..+|..+++.... .......|.++...++|.+. .|+.+ -+.+++..+... ...... .-....|
T Consensus 209 t~~Gl~~~~~~~~~~~~~-~~l~~~~i~~i~~d~~g~lW-igT~~-Gl~~~~~~~~~~----~~~~~~~~~~~~l~~~~i 281 (758)
T 3ott_A 209 TEGYLFQYFPSTGQIKQT-EAFHNNSIKSLALDGNGDLL-AGTDN-GLYVYHNDTTPL----QHIIHDSRNIQSLTNNII 281 (758)
T ss_dssp EEEEEEEEETTTTEEEEE-EEEEEEEEEEEEECTTCCEE-EEETT-EEEEECCTTSCC----EEECCCTTCTTSCSCSCE
T ss_pred ECCCCeEEcCCCCeEEec-cCCCCCeEEEEEEcCCCCEE-EEeCC-ceeEEecCCCcE----EEEEcCCCCcCcCCcCeE
Confidence 556788999887654322 11134468888888777754 44544 477888765421 111100 1123468
Q ss_pred EEEEEcC-CeEEEEeCCCcEEEE
Q 009373 384 NSLAFEF-PWLVSAAGDGKLSLI 405 (536)
Q Consensus 384 ~~l~~~~-~~l~s~s~dg~i~vw 405 (536)
.++..+. ..|..|+..| +.++
T Consensus 282 ~~i~~D~~g~lWiGT~~G-l~~~ 303 (758)
T 3ott_A 282 WNIFADQEHNIWLGTDYG-ISLS 303 (758)
T ss_dssp EEEEECTTCCEEEEESSS-EEEE
T ss_pred EEEEEcCCCCEEEEeCCc-cccc
Confidence 8988875 5677777766 5544
No 317
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.45 E-value=0.21 Score=47.05 Aligned_cols=144 Identities=9% Similarity=0.044 Sum_probs=72.6
Q ss_pred cCCCEEEEEeCC-CcEEEEEcccCccceecccCcccccceEEee-CCccCEEEEEEeCCEEEEEec-C---------CeE
Q 009373 208 ADKKLLVAGGTD-GFIHCWRAVEVLPHLFDISGSEKQNTQFRLW-EHEGPITSLALDLTRIYSGSW-D---------MTV 275 (536)
Q Consensus 208 ~~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~l~s~s~-d---------g~i 275 (536)
.++.+++.|+.+ ..+.++|+.+.... ......+. .....-....+++..++.|+. + ..+
T Consensus 18 ~~~~iyv~GG~~~~~~~~~d~~~~~~~---------W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v 88 (357)
T 2uvk_A 18 DNDTVYIGLGSAGTAWYKLDTQAKDKK---------WTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDV 88 (357)
T ss_dssp ETTEEEEECGGGTTCEEEEETTSSSCC---------EEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCE
T ss_pred ECCEEEEEeCcCCCeEEEEccccCCCC---------eeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccE
Confidence 366666777654 46778887531111 11111111 011112233346666777765 2 468
Q ss_pred EEEeCCCceEeEeeecc----ccEEEEeecCCEEEEec-C---------------------------------------C
Q 009373 276 RVWDRALLKCLKVLRHS----DWVYGLAPHDTTVASTS-G---------------------------------------S 311 (536)
Q Consensus 276 ~iwd~~~~~~~~~~~~~----~~v~~~~~~~~~l~~~~-d---------------------------------------~ 311 (536)
.+||..+.+-...-... ....++..++++++.|+ + .
T Consensus 89 ~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (357)
T 2uvk_A 89 HKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNK 168 (357)
T ss_dssp EEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCC
T ss_pred EEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcc
Confidence 88998876533322111 11223336777777766 3 4
Q ss_pred cEEEEeCCCCcEEEEEccccccce-EEEEEeCCCCEEEEEcC------CCcEEEEEc
Q 009373 312 DVYIWDTNSGCLLTVVNGAHVGNT-KSLARSHTGDFLFTGGE------DGAIHMYEI 361 (536)
Q Consensus 312 ~i~i~d~~~~~~~~~~~~~~~~~i-~~l~~~~~~~~l~tg~~------dg~i~iwd~ 361 (536)
.+.+||+.+.+-...-........ .+++.. ++.+++.|+. ...+.+||+
T Consensus 169 ~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 169 FLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred cEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 699999988764433211111111 223322 5666677664 235777876
No 318
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.36 E-value=0.61 Score=42.84 Aligned_cols=200 Identities=9% Similarity=0.038 Sum_probs=105.5
Q ss_pred EEEEEEecCCCEEEEEe-CCCcEEEEECCCCceeee-eCCC----C--ceEE--EE---ecCCCEEEEEe----------
Q 009373 161 VLTVFVLASAKLLFTSG-YDSIVRMWHLEDGFSIAS-SKPL----G--CTIR--AV---AADKKLLVAGG---------- 217 (536)
Q Consensus 161 V~~v~~~~~~~~l~sgs-~dg~v~iwd~~~~~~~~~-~~~~----~--~~v~--~~---~~~~~~l~sg~---------- 217 (536)
--+++|++....|+.++ ..++|..|+...+..... +..- . .... .+ .+++.++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 34678988666666666 799999999986643333 2221 1 1223 33 35555666543
Q ss_pred ---CCCcEEEEEcc---cCccce-ecccCcccccceEEeeC-CccCEEEEEE--eCCEEEEEecC-CeEEEEeCCCceEe
Q 009373 218 ---TDGFIHCWRAV---EVLPHL-FDISGSEKQNTQFRLWE-HEGPITSLAL--DLTRIYSGSWD-MTVRVWDRALLKCL 286 (536)
Q Consensus 218 ---~dg~i~vwd~~---~~~~~~-~~~~~~~~~~~~~~~~~-h~~~v~~l~~--~~~~l~s~s~d-g~i~iwd~~~~~~~ 286 (536)
.+..|..+|+. +++... .++..... ......+ -......++. +|+..++++.- +.|...+.......
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~--~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~ 172 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQD--EFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVS 172 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHH--HHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccc--cccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEe
Confidence 26779999987 553211 11100000 0000001 1124677888 67888888888 88877776543222
Q ss_pred Eeeecc------ccEEEEe--ecCCEEEEec-CCcEEEEeCCCCcE--EEEEcccc---ccceEEE-EEeCCCCE-EEEE
Q 009373 287 KVLRHS------DWVYGLA--PHDTTVASTS-GSDVYIWDTNSGCL--LTVVNGAH---VGNTKSL-ARSHTGDF-LFTG 350 (536)
Q Consensus 287 ~~~~~~------~~v~~~~--~~~~~l~~~~-d~~i~i~d~~~~~~--~~~~~~~~---~~~i~~l-~~~~~~~~-l~tg 350 (536)
...... ...+.+. |++..|++.. ++.+..+|+.+... +..-..+. ......+ ..-.+|+. +++.
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~ 252 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGA 252 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEE
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEc
Confidence 111111 1133444 7898888776 79999999885432 21110011 1122332 33346776 5555
Q ss_pred cCCCcEEEEEcc
Q 009373 351 GEDGAIHMYEII 362 (536)
Q Consensus 351 ~~dg~i~iwd~~ 362 (536)
...+.+.+.+..
T Consensus 253 ~~~~~~~l~S~D 264 (334)
T 2p9w_A 253 RAPYAISFRSWD 264 (334)
T ss_dssp ETTEEEEEECSS
T ss_pred CCCCEEEEECCC
Confidence 556655555543
No 319
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.33 E-value=0.017 Score=60.16 Aligned_cols=197 Identities=14% Similarity=0.011 Sum_probs=104.6
Q ss_pred CEEEEEEe--CCEEEEE-ecCCeEEEEeCCC----ceEeEeee-ccccEEEEe--ec-CCEEEEec-CCcEEEEeCCCCc
Q 009373 255 PITSLALD--LTRIYSG-SWDMTVRVWDRAL----LKCLKVLR-HSDWVYGLA--PH-DTTVASTS-GSDVYIWDTNSGC 322 (536)
Q Consensus 255 ~v~~l~~~--~~~l~s~-s~dg~i~iwd~~~----~~~~~~~~-~~~~v~~~~--~~-~~~l~~~~-d~~i~i~d~~~~~ 322 (536)
.+..++|+ .+.|+.+ ...+.|..+++.. ......+. .......++ +. ++++++-. .+.|.++++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 45567774 4555554 4557888888875 22222221 111223344 33 44444444 6889999987654
Q ss_pred EEEEEccccccceEEEEEeCCCCEEEEEcC-C-CcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC--CeEEEE-e
Q 009373 323 LLTVVNGAHVGNTKSLARSHTGDFLFTGGE-D-GAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF--PWLVSA-A 397 (536)
Q Consensus 323 ~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~-d-g~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~-s 397 (536)
....+. ........++++|.+.+|+.+.. . +.|.++++..... ..+ ....-...+.|++++ ..|+.+ +
T Consensus 487 ~~~l~~-~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~----~~l--~~~~l~~PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 487 RKTLFR-EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI----YSL--VTENIQWPNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp EEEECC-CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC----CEE--SCSSCSSCCCEEECTTTCCEEEEET
T ss_pred eEEEEe-CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe----eEE--EeCCCCCccEEEEeccCCEEEEEec
Confidence 433332 23345678899997655554432 2 6788777654311 111 112234567899975 445444 4
Q ss_pred CCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC-EEEEecCCCeEEEEeCCchhhHHHH
Q 009373 398 GDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD-RIVCGGEEGIVRIWNFSQAFEIERR 475 (536)
Q Consensus 398 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~sg~~Dg~i~vW~~~~~~~~~~~ 475 (536)
..+.|.++|+...... .+.... . ..++. ..++++++ ++++....+.|..++..++..+..+
T Consensus 560 ~~~~I~~~d~dG~~~~----------~~~~~~--~--~~~~P---~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 560 KLHSISSIDVNGGNRK----------TILEDE--K--RLAHP---FSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp TTTEEEEECSSSSCCE----------EECCCS--S--SCSSC---CCCEEETTEEEEECSTTTCEEEEETTTEEEEECC
T ss_pred CCCeEEEEccCCCceE----------EEEecC--C--cCCCc---eEeEEECCEEEEEeCCCCeEEEEEccCCCceEEe
Confidence 5678999988642110 000000 0 00111 12333444 5666677789999998877655443
No 320
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.32 E-value=0.15 Score=55.93 Aligned_cols=191 Identities=16% Similarity=0.207 Sum_probs=118.9
Q ss_pred cCCeEEEEeCCCceEeEeeeccccEEEEe-ecCCEEEEecCCcEEEEeCCCC-cEEEEEcccc----ccceEEEEEeCCC
Q 009373 271 WDMTVRVWDRALLKCLKVLRHSDWVYGLA-PHDTTVASTSGSDVYIWDTNSG-CLLTVVNGAH----VGNTKSLARSHTG 344 (536)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~~~~v~~~~-~~~~~l~~~~d~~i~i~d~~~~-~~~~~~~~~~----~~~i~~l~~~~~~ 344 (536)
...++.|+|+++...++.+.....|.-.. -+.+.++..++..|..|++... .+...+. -| ...|..-..+++.
T Consensus 84 ag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT~~aVyHW~~~~~s~P~k~fd-R~~~L~~~QIinY~~d~~~ 162 (1630)
T 1xi4_A 84 AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFD-RHSSLAGCQIINYRTDAKQ 162 (1630)
T ss_pred cCCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEcCCeEEEeccCCCCccHHHHh-cchhcccCeeEEeeeCCCC
Confidence 36899999999998888888777777777 6788889999999999999753 3333332 23 4567777888888
Q ss_pred CEEEEEc-------CCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC----C-eEEEEeC---CCcEEEEECCc
Q 009373 345 DFLFTGG-------EDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF----P-WLVSAAG---DGKLSLIDVRK 409 (536)
Q Consensus 345 ~~l~tg~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~----~-~l~s~s~---dg~i~vwd~~~ 409 (536)
++++..| -.|.+.+|..... ..+.+.||.+.-..+...+ . .++.+.. .++++|-++..
T Consensus 163 kW~~l~gi~~~~~~v~G~mQLyS~er~-------~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~ 235 (1630)
T 1xi4_A 163 KWLLLTGISAQQNRVVGAMQLYSVDRK-------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGT 235 (1630)
T ss_pred CeEEEEeeccCCCcccceeeeeecccc-------cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCC
Confidence 8877543 3578999988765 3455667776665555532 2 3332222 37899999865
Q ss_pred ccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCC--EEEEecCCCeEEEEeCCchhhHHHHH
Q 009373 410 LLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGAD--RIVCGGEEGIVRIWNFSQAFEIERRA 476 (536)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~sg~~Dg~i~vW~~~~~~~~~~~~ 476 (536)
..... +...+....+. .++. ..... -.++..++. .+..-..-|.|.++|+.+|..+..-.
T Consensus 236 ~~~~~-~~f~kk~~~~~--~~~~---~~~Df-pv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 236 PPTGN-QPFPKKAVDVF--FPPE---AQNDF-PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred CccCC-CCCcccccccc--CCcc---cccCc-ceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 31111 11111111110 0100 01111 123444443 56666778999999999998886543
No 321
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.29 E-value=0.039 Score=51.27 Aligned_cols=103 Identities=11% Similarity=0.128 Sum_probs=69.1
Q ss_pred CCEEEEEecCCeEEEEeCCCceEeEeeecc--ccEEEEe-e----cCCEEEEe--cCCcEEEEeCCCCcEEEEEcccccc
Q 009373 263 LTRIYSGSWDMTVRVWDRALLKCLKVLRHS--DWVYGLA-P----HDTTVAST--SGSDVYIWDTNSGCLLTVVNGAHVG 333 (536)
Q Consensus 263 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~-~----~~~~l~~~--~d~~i~i~d~~~~~~~~~~~~~~~~ 333 (536)
++.++.++.||.|.-.|..+|+....+... .++.... + ++..++.. .||.+..+|..+|.....+......
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 357899999999999999999999998844 3333332 1 23444443 4999999999998665544311111
Q ss_pred ceEEEEEe-----------CCCCEEEEEcCCCcEEEEEcccCc
Q 009373 334 NTKSLARS-----------HTGDFLFTGGEDGAIHMYEIINDC 365 (536)
Q Consensus 334 ~i~~l~~~-----------~~~~~l~tg~~dg~i~iwd~~~~~ 365 (536)
...-+... ..+..+++|+.+|.+.-.|+.+++
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCC
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 11001111 145678899999999999999993
No 322
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.25 E-value=0.044 Score=57.02 Aligned_cols=219 Identities=10% Similarity=-0.075 Sum_probs=113.4
Q ss_pred CCcEEEEECCCCceeeeeCCC-CceEEEEecCCCEEEEE-eCCCcEEEEEcccCccceecccCcccccceEEeeCCccCE
Q 009373 179 DSIVRMWHLEDGFSIASSKPL-GCTIRAVAADKKLLVAG-GTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPI 256 (536)
Q Consensus 179 dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 256 (536)
.+.|+..++.+......+... ...-+++.+.+..|+.+ ...+.|+.+++.+... + ......+.......
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~------~---~~~~~~i~~~~~~P 455 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------V---SSYDTVISRDIQAP 455 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC----------CCCCCBCCSCC--C
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCC------C---cceEEEEeCCCCCc
Confidence 457888888776554433322 22234556655555554 4457888888754100 0 00000111111123
Q ss_pred EEEEE--eC-CEEEEEecCCeEEEEeCCCceEeEeee-ccccEEEEe--ecCCEEEEec--C-CcEEEEeCCCCcEEEEE
Q 009373 257 TSLAL--DL-TRIYSGSWDMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHDTTVASTS--G-SDVYIWDTNSGCLLTVV 327 (536)
Q Consensus 257 ~~l~~--~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~~~l~~~~--d-~~i~i~d~~~~~~~~~~ 327 (536)
..|++ .+ +.+++-...+.|.++++........+. .......++ |.+..|+.+. . +.|..+++..... ..+
T Consensus 456 ~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l 534 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSL 534 (699)
T ss_dssp CCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEE
T ss_pred ceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEE
Confidence 34555 23 444554567889999987654433333 112233344 5444444433 2 6788877754322 222
Q ss_pred ccccccceEEEEEeCCCC-EEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEE-eCCCcEEEE
Q 009373 328 NGAHVGNTKSLARSHTGD-FLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSA-AGDGKLSLI 405 (536)
Q Consensus 328 ~~~~~~~i~~l~~~~~~~-~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~-s~dg~i~vw 405 (536)
........+.|+++|++. ++++-+..+.|.++++..... ..+...........+|+++++.|+.+ ...+.|..+
T Consensus 535 ~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~----~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 535 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR----KTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSA 610 (699)
T ss_dssp SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC----EEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEE
T ss_pred EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCce----EEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEE
Confidence 212234567899998755 445555677899999865321 12221112223445667766555544 456789999
Q ss_pred ECCccc
Q 009373 406 DVRKLL 411 (536)
Q Consensus 406 d~~~~~ 411 (536)
|..++.
T Consensus 611 d~~~G~ 616 (699)
T 1n7d_A 611 NRLTGS 616 (699)
T ss_dssp ETTTEE
T ss_pred EccCCC
Confidence 976543
No 323
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=96.17 E-value=0.95 Score=43.18 Aligned_cols=262 Identities=14% Similarity=0.076 Sum_probs=138.6
Q ss_pred eEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeC-CccCEEEEEE--eCCEEEEEecCCeEEEE
Q 009373 202 TIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWE-HEGPITSLAL--DLTRIYSGSWDMTVRVW 278 (536)
Q Consensus 202 ~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~--~~~~l~s~s~dg~i~iw 278 (536)
.+..++......+.-..||.|+.|-.......-. ...........+.. ....+..+++ .....+....||.|..|
T Consensus 54 ~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~--g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~w 131 (389)
T 3kci_A 54 RPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGI--GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 131 (389)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEECCGGGTTSS--SSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEE
T ss_pred ceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCC--CCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEE
Confidence 4556666666777778899999996533211000 00000000111111 1123333444 55667777889999999
Q ss_pred eCCCc-----------eEeEeee--ccccEEEEeecCC-EEEEecCCcEEEEeCCCC-c----------EEEEEcccccc
Q 009373 279 DRALL-----------KCLKVLR--HSDWVYGLAPHDT-TVASTSGSDVYIWDTNSG-C----------LLTVVNGAHVG 333 (536)
Q Consensus 279 d~~~~-----------~~~~~~~--~~~~v~~~~~~~~-~l~~~~d~~i~i~d~~~~-~----------~~~~~~~~~~~ 333 (536)
-.... .....+. ....|..++.... .++...+|.|+.|-.... + ....+......
T Consensus 132 G~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~ 211 (389)
T 3kci_A 132 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH 211 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTS
T ss_pred eCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCC
Confidence 54321 1111111 2236777775444 455555899999965331 0 11122111223
Q ss_pred ceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccc------cccceeeeccCCCCCeEEEEEcCCeEEEEeCCCcEEEEEC
Q 009373 334 NTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTE------ANVLLVATWIPHTGPVNSLAFEFPWLVSAAGDGKLSLIDV 407 (536)
Q Consensus 334 ~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~------~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~ 407 (536)
.|..++........++-..||.|+.|-....... ....+..........|..++....+.++-..||.|+.|-.
T Consensus 212 ~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~ 291 (389)
T 3kci_A 212 RVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 291 (389)
T ss_dssp CEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEEC
T ss_pred eEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeC
Confidence 4666665433355666678999999975432211 0001111111123357788877778788889999999987
Q ss_pred CcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEEEeCCchhhH
Q 009373 408 RKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~ 472 (536)
...-+......... ..+.....-....|..++......+.-..||.|+.|-....-++
T Consensus 292 n~~GqLG~g~~~~~-------~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~~GqL 349 (389)
T 3kci_A 292 GDYHRLGHGSDDHV-------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQL 349 (389)
T ss_dssp CGGGTTCSSSCCCE-------EEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECCTTSTT
T ss_pred CCCCCCCCCCCccc-------cCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCCCCCcC
Confidence 65443332211110 00111111122457778877777777788999999998765443
No 324
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.01 E-value=0.22 Score=47.31 Aligned_cols=143 Identities=14% Similarity=0.123 Sum_probs=91.2
Q ss_pred eCCEEEEEecCCeEEEEeCCCceEeEeeecc-----ccEEE--EeecCCEEEEecCCcEEEEeCCCCc------------
Q 009373 262 DLTRIYSGSWDMTVRVWDRALLKCLKVLRHS-----DWVYG--LAPHDTTVASTSGSDVYIWDTNSGC------------ 322 (536)
Q Consensus 262 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----~~v~~--~~~~~~~l~~~~d~~i~i~d~~~~~------------ 322 (536)
++..++.+- ++.||.-++......+.+..+ ..+.. ++|+|++|+..++..|.|..+..+.
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~ 109 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAF 109 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccccc
Confidence 666666554 478888887754444444422 13443 4499999999999999999887332
Q ss_pred EEEEEccc-----cccceEEEEEeCCC---CEEEEEcCCCcEEEEEcccCccccc-cc---eeeeccCCCCCeEEEEEcC
Q 009373 323 LLTVVNGA-----HVGNTKSLARSHTG---DFLFTGGEDGAIHMYEIINDCTEAN-VL---LVATWIPHTGPVNSLAFEF 390 (536)
Q Consensus 323 ~~~~~~~~-----~~~~i~~l~~~~~~---~~l~tg~~dg~i~iwd~~~~~~~~~-~~---~~~~~~~h~~~v~~l~~~~ 390 (536)
..+.+.-+ ...+|..+.|+|-+ ..|++-..|+.|++||+......+. +. ....+......|.+++|.+
T Consensus 110 q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~ 189 (452)
T 3pbp_A 110 QIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSK 189 (452)
T ss_dssp EEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECT
T ss_pred ceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcC
Confidence 12233222 24679999999954 5899999999999999987432111 00 0011223346788999965
Q ss_pred --CeEEE--EeCCCcEEEE
Q 009373 391 --PWLVS--AAGDGKLSLI 405 (536)
Q Consensus 391 --~~l~s--~s~dg~i~vw 405 (536)
-.|+. .+.+|.|+-.
T Consensus 190 ~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 190 DGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TSSCEEEEECTTSCEEEEE
T ss_pred CCcEEEEEecCCCCCEEEE
Confidence 34444 4577888754
No 325
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.99 E-value=0.83 Score=41.30 Aligned_cols=221 Identities=15% Similarity=0.037 Sum_probs=119.5
Q ss_pred cEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccC
Q 009373 160 AVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISG 239 (536)
Q Consensus 160 ~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 239 (536)
.|..|+.... +.+.-. ||.|..|-....-.+..-......|..++......+.-. ||.|+.|-.......-
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg----- 95 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTT----- 95 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTC-----
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCC-----
Confidence 4566655432 222224 888888876543222111111234566664444433334 9999999754321100
Q ss_pred cccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCc-eEeEeeeccccEEEEeecCCEEEEecCCcEEEEeC
Q 009373 240 SEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALL-KCLKVLRHSDWVYGLAPHDTTVASTSGSDVYIWDT 318 (536)
Q Consensus 240 ~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~~l~~~~d~~i~i~d~ 318 (536)
.+ ..-...|..++......+.-. ||.|..|-.... +.-........|..++......++-.++.|..|-.
T Consensus 96 ----~P----~~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~~G~v~~wG~ 166 (282)
T 3qhy_B 96 ----VP----AEARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVKNGGVIAWGD 166 (282)
T ss_dssp ----CC----GGGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEETTEEEEEEC
T ss_pred ----CC----cccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEECCEEEEecC
Confidence 00 011347888888776666667 999999975542 22111123456777774444333333899999976
Q ss_pred CCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEEeC
Q 009373 319 NSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAAG 398 (536)
Q Consensus 319 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~ 398 (536)
.....+.. +......|..++..... .++. .||.|+.|-......... +. .....|..++....+.++-.
T Consensus 167 n~~gqlg~-p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~--p~----~~~~~v~~i~~G~~h~~al~- 235 (282)
T 3qhy_B 167 NYFGQTTV-PAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTV--PT----EALSGVSAIASGEWYSLALK- 235 (282)
T ss_dssp CTTSTTSC-CGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCC--CG----GGGSSCCEEEECSSCEEEEE-
T ss_pred CCCCCCCC-ceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCC--Cc----ccCCCceEEEcCCCEEEEEE-
Confidence 54322211 11123456676654332 2333 599999997655432211 11 11235777877665555555
Q ss_pred CCcEEEEECCc
Q 009373 399 DGKLSLIDVRK 409 (536)
Q Consensus 399 dg~i~vwd~~~ 409 (536)
||.|+.|-...
T Consensus 236 ~g~v~~wG~n~ 246 (282)
T 3qhy_B 236 NGKVIAWGSSR 246 (282)
T ss_dssp TTEEEEESTTC
T ss_pred CCEEEEecCCC
Confidence 99999997654
No 326
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.92 E-value=1 Score=41.38 Aligned_cols=148 Identities=10% Similarity=0.068 Sum_probs=92.4
Q ss_pred EEecCCCEEEEEe-CCCcEEEEEcccCccceecccCcccccceEEeeC----C--ccCEEEEEE---eC-CEEEEEec--
Q 009373 205 AVAADKKLLVAGG-TDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWE----H--EGPITSLAL---DL-TRIYSGSW-- 271 (536)
Q Consensus 205 ~~~~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~----h--~~~v~~l~~---~~-~~l~s~s~-- 271 (536)
.+......++.++ ..|+|..|+...+.... . .+.+ . ...+..|.+ |+ +.|+....
T Consensus 19 ~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~-----------~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~ 86 (334)
T 2p9w_A 19 IYDRTRQVFYQSNLYKGRIEVYNPKTQSHFN-----------V-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNA 86 (334)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTTCCEEE-----------E-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEET
T ss_pred cCcCCCCEEEEEeccCCEEEEEcCCCCeEEE-----------E-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccc
Confidence 4444445555555 78999999986442111 1 1111 0 113467788 33 34444333
Q ss_pred ------------CCeEEEEeCC---CceEeEeeec-----c---------ccEEEEe--ecCCEEEEec-C-CcEEEEeC
Q 009373 272 ------------DMTVRVWDRA---LLKCLKVLRH-----S---------DWVYGLA--PHDTTVASTS-G-SDVYIWDT 318 (536)
Q Consensus 272 ------------dg~i~iwd~~---~~~~~~~~~~-----~---------~~v~~~~--~~~~~l~~~~-d-~~i~i~d~ 318 (536)
+..|..||+. +++.+..... . .....+. ++|+..++++ . +.|..++.
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 6789999999 7877665541 1 1245555 7888888777 7 78887777
Q ss_pred CCCcEEEEEcc----ccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccC
Q 009373 319 NSGCLLTVVNG----AHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIIND 364 (536)
Q Consensus 319 ~~~~~~~~~~~----~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~ 364 (536)
........... ......+.++++|+|..|++....|.+..+|+...
T Consensus 167 dG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 167 DGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp TSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 64422211111 11224679999999998888877999999998843
No 327
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.77 E-value=2.1 Score=43.80 Aligned_cols=191 Identities=12% Similarity=-0.027 Sum_probs=113.0
Q ss_pred cccEEEEEEecCCCEE-EEEeCCCcEEEEECCCCceeeeeCC--CCceEEEEecCCC-EEEEEeCCCcEEEEEcccCccc
Q 009373 158 TEAVLTVFVLASAKLL-FTSGYDSIVRMWHLEDGFSIASSKP--LGCTIRAVAADKK-LLVAGGTDGFIHCWRAVEVLPH 233 (536)
Q Consensus 158 ~~~V~~v~~~~~~~~l-~sgs~dg~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~ 233 (536)
-..+..++|++.+..| ++-..++.|..+++........+.. ....-+++.+.+. +.++-...+.|.+.++.....
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~- 114 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR- 114 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-
Confidence 3467899999865554 4555678999999875533332222 2233456665444 445555567888888754321
Q ss_pred eecccCcccccceEEeeCCccCEEEEEEeC--CEEEEEec--CCeEEEEeCCCceEeEeeeccccEEEEe--ecCCEEEE
Q 009373 234 LFDISGSEKQNTQFRLWEHEGPITSLALDL--TRIYSGSW--DMTVRVWDRALLKCLKVLRHSDWVYGLA--PHDTTVAS 307 (536)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~v~~~~--~~~~~l~~ 307 (536)
.......-.....|++++ ..|+.... .+.|...++...........-.....++ +.+..|+.
T Consensus 115 ------------~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~ 182 (628)
T 4a0p_A 115 ------------QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYW 182 (628)
T ss_dssp ------------EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEE
T ss_pred ------------EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEE
Confidence 111112334567888863 56665553 4677777776544333333334455565 54555554
Q ss_pred ec--CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccC
Q 009373 308 TS--GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIIND 364 (536)
Q Consensus 308 ~~--d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~ 364 (536)
+. .+.|..+|+..... ..+. .......++++.. +.++++-...+.|...|..++
T Consensus 183 aD~~~~~I~~~d~dG~~~-~v~~-~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 183 TDLDTNLIESSNMLGLNR-EVIA-DDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp EETTTTEEEEEETTSCSC-EEEE-ECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred EECCCCEEEEEcCCCCce-EEee-ccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCC
Confidence 44 57899999876543 2332 2334566788765 455666666788988887665
No 328
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.64 E-value=1.3 Score=40.50 Aligned_cols=223 Identities=9% Similarity=0.049 Sum_probs=127.5
Q ss_pred EEecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe-cCCCEEEEEeCCCcEEEEEcccCccceecccCcccc
Q 009373 165 FVLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA-ADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQ 243 (536)
Q Consensus 165 ~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~ 243 (536)
-.+|..+.+|--. ..++.|||+++.+.++.+.-. ..|.-+. .+.+.|+-.+ +..|+.|+++....
T Consensus 73 IMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~L~lVT-~taVyHWs~~~~s~----------- 138 (365)
T 2xzh_A 73 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT-DNAVYHWSMEGESQ----------- 138 (365)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSEEEEEE-SSEEEEEESSTTCC-----------
T ss_pred eeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCeEEEEc-CCcEEEEcccCCCC-----------
Confidence 3588888777665 688999999999988887654 4566665 3444444443 45799999865321
Q ss_pred cceEEeeCCc----cCEEEEEE--eCCEEEEEe-------cCCeEEEEeCCCceEeEeeeccccEEEEeecC----C-EE
Q 009373 244 NTQFRLWEHE----GPITSLAL--DLTRIYSGS-------WDMTVRVWDRALLKCLKVLRHSDWVYGLAPHD----T-TV 305 (536)
Q Consensus 244 ~~~~~~~~h~----~~v~~l~~--~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~----~-~l 305 (536)
+...+..|. ..|..... +.++++..+ -.|.+.+|..+.+.....-.|...-..+..+| . ++
T Consensus 139 -P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf 217 (365)
T 2xzh_A 139 -PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLF 217 (365)
T ss_dssp -CEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEE
T ss_pred -CceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEE
Confidence 222222222 23444444 234433222 23678889887654433323554444444222 1 33
Q ss_pred EEec----CCcEEEEeCCCC---c------EEEEEc--cccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcccccc
Q 009373 306 ASTS----GSDVYIWDTNSG---C------LLTVVN--GAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANV 370 (536)
Q Consensus 306 ~~~~----d~~i~i~d~~~~---~------~~~~~~--~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~ 370 (536)
+.+. .+++++.++... . .+..+. ....+-.-++..++.-..+..-+.-|.+++||+.++
T Consensus 218 ~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTg------ 291 (365)
T 2xzh_A 218 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG------ 291 (365)
T ss_dssp EEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC------
T ss_pred EEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccC------
Confidence 3222 268999988432 1 111111 112344567888888888888899999999999999
Q ss_pred ceeeeccCCCCCeEEEEEc--CCeEEEEeCCCcEEEEECC
Q 009373 371 LLVATWIPHTGPVNSLAFE--FPWLVSAAGDGKLSLIDVR 408 (536)
Q Consensus 371 ~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~ 408 (536)
.++..-+-...+|..-+.+ ..-++.....|.|.--.++
T Consensus 292 t~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 292 TCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp CEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEEC
T ss_pred cEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEEC
Confidence 5555444444454433332 1344444455555544443
No 329
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.43 E-value=0.0058 Score=62.59 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=31.9
Q ss_pred ccCCcHHHHHHHhcCC-ChhhHHHHhhhhHHHHHH
Q 009373 64 ITDLPPALISEILNCL-DPKELGIVSCVSPILHRL 97 (536)
Q Consensus 64 l~~Lp~ei~~~I~~~L-~~~~l~~~~~v~~~~~~l 97 (536)
...||+|++.+||+|| +++++.+++.|||+|+.+
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 3479999999999999 899999999999999998
No 330
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.42 E-value=2.7 Score=42.88 Aligned_cols=211 Identities=9% Similarity=-0.067 Sum_probs=120.3
Q ss_pred CCCcEEEEECCCCceeeeeC--C-CCceEEEEecCCCEE-EEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCc
Q 009373 178 YDSIVRMWHLEDGFSIASSK--P-LGCTIRAVAADKKLL-VAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHE 253 (536)
Q Consensus 178 ~dg~v~iwd~~~~~~~~~~~--~-~~~~v~~~~~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~ 253 (536)
....|+..++++......+. + ....-+++.+.++.| ++-..++.|..+++.... ....+....
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~-------------~~~v~~~g~ 79 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA-------------LEHVVEFGL 79 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-------------CEEEECSSC
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC-------------cEEEEeCCC
Confidence 45678999998765433322 2 122335566655544 455567888888875432 111111112
Q ss_pred cCEEEEEEe--CCE-EEEEecCCeEEEEeCCCceEeEee-eccccEEEEe--ecCCEEEEec---CCcEEEEeCCCCcEE
Q 009373 254 GPITSLALD--LTR-IYSGSWDMTVRVWDRALLKCLKVL-RHSDWVYGLA--PHDTTVASTS---GSDVYIWDTNSGCLL 324 (536)
Q Consensus 254 ~~v~~l~~~--~~~-l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~--~~~~~l~~~~---d~~i~i~d~~~~~~~ 324 (536)
.....++++ ++. +++-...+.|.+.++........+ ..-.....++ |....|+.+. .+.|...++......
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 334566663 444 455556688999998654332222 2223345555 5344444433 467888887655433
Q ss_pred EEEccccccceEEEEEeCCCCEEEEE-cCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcCCeEEEEeC-CCcE
Q 009373 325 TVVNGAHVGNTKSLARSHTGDFLFTG-GEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAAG-DGKL 402 (536)
Q Consensus 325 ~~~~~~~~~~i~~l~~~~~~~~l~tg-~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~-dg~i 402 (536)
.... .......++++++++.|..+ ...+.|..+|+..... .. +........+|++..+.|+.+.. .+.|
T Consensus 160 ~l~~--~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~----~v---~~~~l~~P~glav~~~~ly~tD~~~~~I 230 (628)
T 4a0p_A 160 TLVP--NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR----EV---IADDLPHPFGLTQYQDYIYWTDWSRRSI 230 (628)
T ss_dssp EEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EE---EEECCSCEEEEEEETTEEEEEETTTTEE
T ss_pred EEEC--CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce----EE---eeccCCCceEEEEECCEEEEecCCCCEE
Confidence 3332 44578899999976655554 5567899999876421 11 22233455688887777766665 6788
Q ss_pred EEEECCcc
Q 009373 403 SLIDVRKL 410 (536)
Q Consensus 403 ~vwd~~~~ 410 (536)
...|..++
T Consensus 231 ~~~dk~tg 238 (628)
T 4a0p_A 231 ERANKTSG 238 (628)
T ss_dssp EEEETTTC
T ss_pred EEEECCCC
Confidence 88886544
No 331
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.39 E-value=1.5 Score=39.62 Aligned_cols=221 Identities=15% Similarity=0.056 Sum_probs=121.5
Q ss_pred eEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCC
Q 009373 202 TIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRA 281 (536)
Q Consensus 202 ~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~ 281 (536)
.|..++......+.-. ||.|+.|-.......- .+ ......|..++......+.-. ||.|..|-..
T Consensus 25 ~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg---------~p----~~~~~~i~~ia~G~~hs~~l~-~G~v~~wG~n 89 (282)
T 3qhy_B 25 GVDAIAGGYFHGLALK-GGKVLGWGANLNGQLT---------MP----AATQSGVDAIAAGNYHSLALK-DGEVIAWGGN 89 (282)
T ss_dssp SCCEEEECSSEEEEEE-TTEEEEEECCSSSTTS---------CC----GGGGSCCCEEEECSSEEEEEE-TTEEEEEECC
T ss_pred CCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCC---------CC----ccCCCCEEEEEeCCCEEEEEE-CCEEEEeeCC
Confidence 4556664444444445 9999999754321100 00 012336778887554444445 9999999755
Q ss_pred CceEeEe-eeccccEEEEe-ecCCEEEEecCCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEE
Q 009373 282 LLKCLKV-LRHSDWVYGLA-PHDTTVASTSGSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMY 359 (536)
Q Consensus 282 ~~~~~~~-~~~~~~v~~~~-~~~~~l~~~~d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iw 359 (536)
..-.+.. ......|..++ -....++.. +|.|..|-....-.+-. .......|..++...... ++ -. ||.|..|
T Consensus 90 ~~Gqlg~P~~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~-~~~~~~~i~~i~~G~~~~-~~-l~-~G~v~~w 164 (282)
T 3qhy_B 90 EDGQTTVPAEARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTV-PAEAQSGVTALDGGVYTA-LA-VK-NGGVIAW 164 (282)
T ss_dssp TTSTTCCCGGGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSC-CGGGGSSEEEEEECSSEE-EE-EE-TTEEEEE
T ss_pred CCCCCCCCcccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCC-CccCCCCeEEEEcccCEE-EE-EE-CCEEEEe
Confidence 3222111 11234677777 444556666 99999997654322111 111334566666543322 22 23 7999999
Q ss_pred EcccCccccccceeeeccCCCCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeecccc
Q 009373 360 EIINDCTEANVLLVATWIPHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFE 439 (536)
Q Consensus 360 d~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (536)
-......... + ..-...|..++....+.+.- .||.|+.|-....-+...+. ...
T Consensus 165 G~n~~gqlg~--p----~~~~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p~-------------------~~~ 218 (282)
T 3qhy_B 165 GDNYFGQTTV--P----AEAQSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVPT-------------------EAL 218 (282)
T ss_dssp ECCTTSTTSC--C----GGGGSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCG-------------------GGG
T ss_pred cCCCCCCCCC--c----eecCCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCCc-------------------ccC
Confidence 7655432111 1 11135688888776555555 69999999876543322110 011
Q ss_pred ccEEEEEecCCEEEEecCCCeEEEEeCCch
Q 009373 440 CNLLSVDIGADRIVCGGEEGIVRIWNFSQA 469 (536)
Q Consensus 440 ~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~ 469 (536)
..+..++......+.-. ||.|+.|-....
T Consensus 219 ~~v~~i~~G~~h~~al~-~g~v~~wG~n~~ 247 (282)
T 3qhy_B 219 SGVSAIASGEWYSLALK-NGKVIAWGSSRT 247 (282)
T ss_dssp SSCCEEEECSSCEEEEE-TTEEEEESTTCC
T ss_pred CCceEEEcCCCEEEEEE-CCEEEEecCCCC
Confidence 23556665555433334 999999987764
No 332
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.34 E-value=2.9 Score=42.62 Aligned_cols=194 Identities=13% Similarity=0.043 Sum_probs=102.7
Q ss_pred ccccEEEEEEecCCCEEEEE-eCCCcEEEEECCCCce-eeeeCC--CCceEEEEecCCC-EEEEEeCCCcEEEEEcccCc
Q 009373 157 HTEAVLTVFVLASAKLLFTS-GYDSIVRMWHLEDGFS-IASSKP--LGCTIRAVAADKK-LLVAGGTDGFIHCWRAVEVL 231 (536)
Q Consensus 157 h~~~V~~v~~~~~~~~l~sg-s~dg~v~iwd~~~~~~-~~~~~~--~~~~v~~~~~~~~-~l~sg~~dg~i~vwd~~~~~ 231 (536)
.-.....++|++.+..|+-+ ...+.|..++++.... ...+.. ....-+++.+.++ ++++-...+.|.+.++....
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~ 117 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL 117 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC
Confidence 34457799999866655544 4568899999876532 122222 2233456666444 55555667889999876532
Q ss_pred cceecccCcccccceEEeeCCccCEEEEEEeC--CEEEEEec--CCeEEEEeCCCceEeEeee-ccccEEEEe--ecCCE
Q 009373 232 PHLFDISGSEKQNTQFRLWEHEGPITSLALDL--TRIYSGSW--DMTVRVWDRALLKCLKVLR-HSDWVYGLA--PHDTT 304 (536)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~--dg~i~iwd~~~~~~~~~~~-~~~~v~~~~--~~~~~ 304 (536)
. .......-.....|++++ +.|+.... .+.|...++.......... .-.....++ +.+..
T Consensus 118 ~-------------~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~ 184 (619)
T 3s94_A 118 R-------------KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQK 184 (619)
T ss_dssp C-------------EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTE
T ss_pred E-------------EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCE
Confidence 1 111112334456777743 45555543 3566666665332222222 233445555 44555
Q ss_pred EEEec--CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCc
Q 009373 305 VASTS--GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDC 365 (536)
Q Consensus 305 l~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~ 365 (536)
|+.+. .+.|..+|+.......... +......++++..+ .++++-...+.|...|..++.
T Consensus 185 LY~aD~~~~~I~~~~~dG~~~~~~~~-~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 185 LYWADAKLNFIHKSNLDGTNRQAVVK-GSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp EEEEETTTCCEEEESSSCCEEC----------CCCEEESSS-EEEEECTTTCSEEEEESSSCC
T ss_pred EEEEeCCCCeEEEecCCCCccEEEEe-CCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCc
Confidence 54444 5789999987543332221 12223456677655 455555567889999886653
No 333
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.76 E-value=3 Score=39.79 Aligned_cols=260 Identities=9% Similarity=0.024 Sum_probs=148.3
Q ss_pred CCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEE
Q 009373 178 YDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPIT 257 (536)
Q Consensus 178 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 257 (536)
.+..|.|-|+.++..+..-. -.....-++|..+.++.-. ..++.++|+++.. ...... ...+|.
T Consensus 46 ~~~~vvIiDl~~~~~~~rrp-i~AdsAIMnP~~~iiALra-g~~lQiFnle~K~-------------klks~~-~~e~Vv 109 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRP-ISADSAIMNPASKVIALKA-GKTLQIFNIEMKS-------------KMKAHT-MTDDVT 109 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEE-CCCSEEEECSSSSCEEEEE-TTEEEEEETTTTE-------------EEEEEE-CSSCCC
T ss_pred CCCeEEEEECCCCCcceecc-cccceeeeCCCCcEEEEec-CCeEEEEchHHhh-------------hhccee-cCCCce
Confidence 34579999998875543221 1122223457777666655 7899999997752 222221 234566
Q ss_pred EEEE-eCCEEEEEecCCeEEEEeCCC-ceEeEeee-c----cccEEEEe--ecCCEEEEec--------CCcEEEEeCCC
Q 009373 258 SLAL-DLTRIYSGSWDMTVRVWDRAL-LKCLKVLR-H----SDWVYGLA--PHDTTVASTS--------GSDVYIWDTNS 320 (536)
Q Consensus 258 ~l~~-~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~-~----~~~v~~~~--~~~~~l~~~~--------d~~i~i~d~~~ 320 (536)
--.| +.+.|+-.+ +..|+-|++.. ..+.+.+. | ...|.... ++.+.++..+ .|.+.+|..+.
T Consensus 110 fWkWis~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er 188 (494)
T 1bpo_A 110 FWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR 188 (494)
T ss_dssp EEEEEETTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT
T ss_pred EEEecCCCeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc
Confidence 6677 777776655 46899999964 34455554 2 33444443 6666655432 26789999876
Q ss_pred CcEEEEEccccccceEEEEEeCCC---CEEEEEcCC---CcEEEEEcccCc---cccccceeeeccC---CCCCeEEEEE
Q 009373 321 GCLLTVVNGAHVGNTKSLARSHTG---DFLFTGGED---GAIHMYEIINDC---TEANVLLVATWIP---HTGPVNSLAF 388 (536)
Q Consensus 321 ~~~~~~~~~~~~~~i~~l~~~~~~---~~l~tg~~d---g~i~iwd~~~~~---~~~~~~~~~~~~~---h~~~v~~l~~ 388 (536)
+... .+ .||......+...-+. .+++.+... +.++|.++.... .....+.+..+.+ -..-..++..
T Consensus 189 ~~sQ-~i-eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqv 266 (494)
T 1bpo_A 189 KVSQ-PI-EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI 266 (494)
T ss_dssp CCEE-EE-CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEE
T ss_pred cccc-hh-eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEe
Confidence 6432 22 4676655444432111 234444332 789999985441 1111111221222 2344557777
Q ss_pred cC--CeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEec--CCEEEEecCCCeEEEE
Q 009373 389 EF--PWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIG--ADRIVCGGEEGIVRIW 464 (536)
Q Consensus 389 ~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~sg~~Dg~i~vW 464 (536)
++ +.++.-+.-|.|++||+.++...+.. +-....|+.-+++ ..-++.....|.|.--
T Consensus 267 s~kygviyviTK~G~i~lyDleTgt~i~~n-------------------rIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v 327 (494)
T 1bpo_A 267 SEKHDVVFLITKYGYIHLYDLETGTCIYMN-------------------RISGETIFVTAPHEATAGIIGVNRKGQVLSV 327 (494)
T ss_dssp ETTTTEEEEEETTSEEEEEETTTCCEEEEE-------------------ECCSSCEEEEEEETTTTEEEEEETTCEEEEE
T ss_pred cccCCEEEEEecCceEEEEecccceeeeee-------------------cccCCceEEecccCCCCcEEEEccCceEEEE
Confidence 76 68889999999999999986443321 1122333333332 2356666678888777
Q ss_pred eCCchhhHHHH
Q 009373 465 NFSQAFEIERR 475 (536)
Q Consensus 465 ~~~~~~~~~~~ 475 (536)
.+++...+.-.
T Consensus 328 ~v~e~~ivpyi 338 (494)
T 1bpo_A 328 CVEEENIIPYI 338 (494)
T ss_dssp EECTTTHHHHH
T ss_pred EEccccchhhh
Confidence 77776655443
No 334
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=93.98 E-value=4.5 Score=38.68 Aligned_cols=302 Identities=15% Similarity=0.079 Sum_probs=159.1
Q ss_pred cccEEEEEEecCCCEEEEEeCCCcEEEEECCCC-c----------eeeeeC-CCCceEEEEecCCCEEEEEeCC-CcEEE
Q 009373 158 TEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDG-F----------SIASSK-PLGCTIRAVAADKKLLVAGGTD-GFIHC 224 (536)
Q Consensus 158 ~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~-~----------~~~~~~-~~~~~v~~~~~~~~~l~sg~~d-g~i~v 224 (536)
...|..|+.- ..+.+.-..||.|..|=.... + ....+. .....|..++......+.-..+ +.|+.
T Consensus 15 ~~~v~~ia~G--~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~ 92 (406)
T 4d9s_A 15 PRKVLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYS 92 (406)
T ss_dssp CCCEEEEEEC--SSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEEE
T ss_pred ccceEEEecC--CCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEEE
Confidence 3456666553 445555667888888864321 1 011111 1223577777666655555555 49999
Q ss_pred EEcccCccceecccCcccccceEEeeC-CccCEEEEEEeCCEEEEEecCCeEEEEeCCCc-e----------EeEeee--
Q 009373 225 WRAVEVLPHLFDISGSEKQNTQFRLWE-HEGPITSLALDLTRIYSGSWDMTVRVWDRALL-K----------CLKVLR-- 290 (536)
Q Consensus 225 wd~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~-~----------~~~~~~-- 290 (536)
|-.......-.. .......+ ..+.. ....|..++......+....||.|..|-.... + ....+.
T Consensus 93 wG~n~~GqLG~g-~~~~~~~p-~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~ 170 (406)
T 4d9s_A 93 WGWGDFGRLGHG-NSSDLFTP-LPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF 170 (406)
T ss_dssp EECCGGGTTCSS-SCCCEEEE-EECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGG
T ss_pred EcCCCCcCCCCC-CCCccccc-eEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEeccc
Confidence 964332110000 00000001 11111 23368888887777778889999999964321 1 111111
Q ss_pred ccccEEEEeecCC-EEEEecCCcEEEEeCCCC----------c-EEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEE
Q 009373 291 HSDWVYGLAPHDT-TVASTSGSDVYIWDTNSG----------C-LLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHM 358 (536)
Q Consensus 291 ~~~~v~~~~~~~~-~l~~~~d~~i~i~d~~~~----------~-~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~i 358 (536)
....|..++.... .++...+|.|+.|-.... . ....+.......|..++.. ..+.++-..+|.|+.
T Consensus 171 ~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G~v~~ 248 (406)
T 4d9s_A 171 EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSGALYT 248 (406)
T ss_dssp TTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTCCEEE
T ss_pred CCCcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcCCCCEEE
Confidence 2236777775444 445555899999964321 1 1111111112345555443 334455567889998
Q ss_pred EEcccCccc------cccceeeeccCCCCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCe
Q 009373 359 YEIINDCTE------ANVLLVATWIPHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQ 432 (536)
Q Consensus 359 wd~~~~~~~------~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (536)
|-....... ....+..........|..++-...+.++-..||.|+.|-....-+.......... .+.
T Consensus 249 wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~-------~p~ 321 (406)
T 4d9s_A 249 YGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQC-------SPV 321 (406)
T ss_dssp EECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSSCEE-------EEE
T ss_pred eeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEecCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCc-------cCE
Confidence 875433211 0001111111123457777777777788889999999987654333222111110 011
Q ss_pred eeeccccccEEEEEecCCEEEEecCCCeEEEEeCCchhhH
Q 009373 433 RMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 433 ~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~ 472 (536)
.........|..++....+.+.-..||.|+.|-....-++
T Consensus 322 ~v~~~~~~~v~~va~G~~hs~alt~~G~v~~wG~n~~GqL 361 (406)
T 4d9s_A 322 QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQL 361 (406)
T ss_dssp EECCGGGCCEEEEEECSSEEEEEETTSCEEEEECCTTSTT
T ss_pred EEeccCCCcEEEEEeCCCeEEEEeCCCCEEEecCCCCCcc
Confidence 1111123457788877777777778999999997654433
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.67 E-value=5.5 Score=41.25 Aligned_cols=198 Identities=10% Similarity=0.038 Sum_probs=101.5
Q ss_pred cCCCEEEEEeCC----CcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEE--eCCEEEEEecCC------eE
Q 009373 208 ADKKLLVAGGTD----GFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIYSGSWDM------TV 275 (536)
Q Consensus 208 ~~~~~l~sg~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~dg------~i 275 (536)
.++.+++.|+.+ ..+.+||..++.......... .. ........-....+ ++..++.|+.++ .+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p-~~----~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv 470 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVS-SS----EVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDN 470 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCC-CS----CCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCC-CC----CCCccccceEEEEEccCCEEEEEcCCCCCCCccccE
Confidence 667778888754 457788876653211110000 00 01111112233445 566667776543 57
Q ss_pred EEEeCCCceEeEe--eec-cccEEEEe-ecCCEEEEec-C--CcEEEEeCCCCcEEEEEcc----ccccceEEEEEeCC-
Q 009373 276 RVWDRALLKCLKV--LRH-SDWVYGLA-PHDTTVASTS-G--SDVYIWDTNSGCLLTVVNG----AHVGNTKSLARSHT- 343 (536)
Q Consensus 276 ~iwd~~~~~~~~~--~~~-~~~v~~~~-~~~~~l~~~~-d--~~i~i~d~~~~~~~~~~~~----~~~~~i~~l~~~~~- 343 (536)
.+||..+.+-... +.. ...-.++. .++.+++.|+ + +.+.+||+.+......-.. .......++.+..+
T Consensus 471 ~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~ 550 (695)
T 2zwa_A 471 WIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVS 550 (695)
T ss_dssp EEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTT
T ss_pred EEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCC
Confidence 8899887543322 111 11112233 3778777776 3 2799999998764433210 01112233555555
Q ss_pred CCEEEEEcC--C-----CcEEEEEcccCcc--ccccceeeec-cCCCCCeEEEEEc-CCeEEEEeC--------CCcEEE
Q 009373 344 GDFLFTGGE--D-----GAIHMYEIINDCT--EANVLLVATW-IPHTGPVNSLAFE-FPWLVSAAG--------DGKLSL 404 (536)
Q Consensus 344 ~~~l~tg~~--d-----g~i~iwd~~~~~~--~~~~~~~~~~-~~h~~~v~~l~~~-~~~l~s~s~--------dg~i~v 404 (536)
+.+++.|+. + ..+.+||+.+..- ......+... ......-.++.+. +..++.|+. ...|.+
T Consensus 551 ~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~ 630 (695)
T 2zwa_A 551 KQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIIS 630 (695)
T ss_dssp TEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEE
T ss_pred CEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEE
Confidence 667777765 2 3588999887741 0001122211 1111222445556 666667764 345889
Q ss_pred EECCcc
Q 009373 405 IDVRKL 410 (536)
Q Consensus 405 wd~~~~ 410 (536)
||+.+.
T Consensus 631 yd~~t~ 636 (695)
T 2zwa_A 631 LDPLSE 636 (695)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 998764
No 336
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.58 E-value=2.8 Score=43.45 Aligned_cols=186 Identities=10% Similarity=0.052 Sum_probs=96.4
Q ss_pred cCCCEEEEEeCC----CcEEEEECCCCceeeee--------CCCC-ceEEEEec-CCCEEEEEeCCC------cEEEEEc
Q 009373 168 ASAKLLFTSGYD----SIVRMWHLEDGFSIASS--------KPLG-CTIRAVAA-DKKLLVAGGTDG------FIHCWRA 227 (536)
Q Consensus 168 ~~~~~l~sgs~d----g~v~iwd~~~~~~~~~~--------~~~~-~~v~~~~~-~~~~l~sg~~dg------~i~vwd~ 227 (536)
.++.+++.|+.+ ..+.+||..+++-...- .... ....+... ++.+++.|+.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 356777777753 46888998876432221 1111 12222223 778888887643 4778887
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEE-eCCEEEEEecCC--eEEEEeCCCceEeEeee--------ccccEE
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLAL-DLTRIYSGSWDM--TVRVWDRALLKCLKVLR--------HSDWVY 296 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~--------~~~~v~ 296 (536)
.+..-.. ...+......-.+..+ ++..++.|+.++ .+.+||..+.+-...-. ......
T Consensus 476 ~t~~W~~-----------~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~ 544 (695)
T 2zwa_A 476 KTREWSM-----------IKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGL 544 (695)
T ss_dssp TTTEEEE-----------CCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEE
T ss_pred CCCcEEE-----------CCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEE
Confidence 6643111 1111111122233343 777788887655 68999998765433221 011111
Q ss_pred EEeec-CCEEEEec-C-------CcEEEEeCCCCcE-----EEEEcc--ccccceEEEEEeCCCCEEEEEcCC-------
Q 009373 297 GLAPH-DTTVASTS-G-------SDVYIWDTNSGCL-----LTVVNG--AHVGNTKSLARSHTGDFLFTGGED------- 353 (536)
Q Consensus 297 ~~~~~-~~~l~~~~-d-------~~i~i~d~~~~~~-----~~~~~~--~~~~~i~~l~~~~~~~~l~tg~~d------- 353 (536)
.+... +++++.|+ + +.+.+||+.+... ...+.. .....-.++....++.+++.|+.+
T Consensus 545 v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~ 624 (695)
T 2zwa_A 545 EFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDR 624 (695)
T ss_dssp EEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCT
T ss_pred EEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCC
Confidence 22222 55666665 1 3489999988871 222211 011111122333336777777743
Q ss_pred -CcEEEEEcccC
Q 009373 354 -GAIHMYEIIND 364 (536)
Q Consensus 354 -g~i~iwd~~~~ 364 (536)
..+.+||+.+.
T Consensus 625 ~~~v~~yd~~t~ 636 (695)
T 2zwa_A 625 TNSIISLDPLSE 636 (695)
T ss_dssp TTSEEEEETTTT
T ss_pred CCeEEEEECCCC
Confidence 45888887765
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.35 E-value=3.7 Score=45.51 Aligned_cols=186 Identities=12% Similarity=0.105 Sum_probs=102.2
Q ss_pred EecCCCEEEEEeCCCcEEEEECCCCceeeeeCCCCceEEEEe-cCCCEEEEEeCCCcEEEEEcccCcc--ceecccCccc
Q 009373 166 VLASAKLLFTSGYDSIVRMWHLEDGFSIASSKPLGCTIRAVA-ADKKLLVAGGTDGFIHCWRAVEVLP--HLFDISGSEK 242 (536)
Q Consensus 166 ~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~-~~~~~l~sg~~dg~i~vwd~~~~~~--~~~~~~~~~~ 242 (536)
.+|..+.+|-=. ..++.|||+++...++.+.-. .+|.-+. .+.+.|+-.+ +..|+.|++..... .+|+....
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~-- 147 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSS-- 147 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhcccccC-CCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcchh--
Confidence 567777666554 689999999998888776543 3455555 3334433332 45799999964321 12221111
Q ss_pred ccceEEeeCCccCEEEEEE--eCCEEEEE-------ecCCeEEEEeCCCceEeEeeeccccEEEEe----ec-CCEEEEe
Q 009373 243 QNTQFRLWEHEGPITSLAL--DLTRIYSG-------SWDMTVRVWDRALLKCLKVLRHSDWVYGLA----PH-DTTVAST 308 (536)
Q Consensus 243 ~~~~~~~~~h~~~v~~l~~--~~~~l~s~-------s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~----~~-~~~l~~~ 308 (536)
+. ...|..... +.++++.. .-.|.+.+|..+.+.....-.|...-..+. +. ..+++.+
T Consensus 148 ------L~--~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~ 219 (1630)
T 1xi4_A 148 ------LA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFA 219 (1630)
T ss_pred ------cc--cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEE
Confidence 11 233444444 33443322 234788888876543222112333332222 11 1222222
Q ss_pred c----CCcEEEEeCCCC---cE------EEEEcc--ccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccC
Q 009373 309 S----GSDVYIWDTNSG---CL------LTVVNG--AHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIIND 364 (536)
Q Consensus 309 ~----d~~i~i~d~~~~---~~------~~~~~~--~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~ 364 (536)
. ++.++|.++... .+ +..+.. ....-..++..++.-..+..-+.-|.|++||+.++
T Consensus 220 ~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~ 290 (1630)
T 1xi4_A 220 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG 290 (1630)
T ss_pred EecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccc
Confidence 2 368888888543 11 111111 12233456777888888888889999999999998
No 338
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=92.87 E-value=7.7 Score=38.01 Aligned_cols=193 Identities=8% Similarity=-0.048 Sum_probs=101.8
Q ss_pred cEEEEEEecC-C-CEEEEEeCCCcEEEEECCCCceeeeeCCC-----CceEEEE-------ecCCCEEEEEeCCC-c---
Q 009373 160 AVLTVFVLAS-A-KLLFTSGYDSIVRMWHLEDGFSIASSKPL-----GCTIRAV-------AADKKLLVAGGTDG-F--- 221 (536)
Q Consensus 160 ~V~~v~~~~~-~-~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-----~~~v~~~-------~~~~~~l~sg~~dg-~--- 221 (536)
....|+|+|. + +++++-...+.|++.|++++......... .....++ .++++.|+++...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3568899983 4 44544444577999999887665444322 1344667 77888666666554 2
Q ss_pred ---EEEEEccc-CccceecccCcccccceEEeeCCccCEEEEEEe---CCEEEEEecCCeEEEEeCC-------CceE--
Q 009373 222 ---IHCWRAVE-VLPHLFDISGSEKQNTQFRLWEHEGPITSLALD---LTRIYSGSWDMTVRVWDRA-------LLKC-- 285 (536)
Q Consensus 222 ---i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~-------~~~~-- 285 (536)
|.+.+... +.. ...........+ .| ...++++ +.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~-----~~~~~~~~v~~~-~~---p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~t 290 (496)
T 3kya_A 220 SPSVYIIKRNADGTF-----DDRSDIQLIAAY-KQ---CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWD 290 (496)
T ss_dssp EEEEEEEECCTTSCC-----STTSCEEEEEEE-SC---CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCC
T ss_pred CceEEEEecCCCCce-----eecccceeeccC-CC---ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeec
Confidence 55554322 110 000000011111 22 2344553 3445566677889999987 4543
Q ss_pred ---------eEe-ee--ccccEE--EEeecCCEEEEe-c-CCcEEEEeC--CCCcE--EEEEcc-----cc---------
Q 009373 286 ---------LKV-LR--HSDWVY--GLAPHDTTVAST-S-GSDVYIWDT--NSGCL--LTVVNG-----AH--------- 331 (536)
Q Consensus 286 ---------~~~-~~--~~~~v~--~~~~~~~~l~~~-~-d~~i~i~d~--~~~~~--~~~~~~-----~~--------- 331 (536)
... +. .....+ ++.++++.++.+ . ...|+.++. .++.. ...+-. +.
T Consensus 291 p~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~ 370 (496)
T 3kya_A 291 PIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEAR 370 (496)
T ss_dssp CBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCB
T ss_pred ccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccc
Confidence 111 22 223333 445888854444 3 678888554 43322 122211 00
Q ss_pred ccceE-EEEEe-------CCCCEEEEEcCCCcEEEEEc
Q 009373 332 VGNTK-SLARS-------HTGDFLFTGGEDGAIHMYEI 361 (536)
Q Consensus 332 ~~~i~-~l~~~-------~~~~~l~tg~~dg~i~iwd~ 361 (536)
-.... .++.. ++|.++++-.....|+.++.
T Consensus 371 f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 371 MNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp CSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred cCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC
Confidence 11244 45554 45677777777888999983
No 339
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=92.65 E-value=8.2 Score=37.80 Aligned_cols=201 Identities=9% Similarity=-0.028 Sum_probs=107.8
Q ss_pred ccEEEEEE-------ecCCCEEEEEeCCC-------cEEEEECCC-Cc--------eeeeeCCCCceEEEEec-CCCEEE
Q 009373 159 EAVLTVFV-------LASAKLLFTSGYDS-------IVRMWHLED-GF--------SIASSKPLGCTIRAVAA-DKKLLV 214 (536)
Q Consensus 159 ~~V~~v~~-------~~~~~~l~sgs~dg-------~v~iwd~~~-~~--------~~~~~~~~~~~v~~~~~-~~~~l~ 214 (536)
.....++| +++++.|+.+...+ .|.+++... +. .+..+. |. .-.++.+ ++.+++
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p-~giavdp~~g~LYv 263 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK-QC-NGATIHPINGELYF 263 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES-CC-CCEEECTTTCCEEE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCC-Cc-eEEEEcCCCCeEEE
Confidence 35889999 99999666666554 266665443 22 122221 22 2235667 455566
Q ss_pred EEeCCCcEEEEEcc-------cCcc-ceecccCcccccceEEeeCCccCEEEEEE--eCCEEE-EEecCCeEEEEeC--C
Q 009373 215 AGGTDGFIHCWRAV-------EVLP-HLFDISGSEKQNTQFRLWEHEGPITSLAL--DLTRIY-SGSWDMTVRVWDR--A 281 (536)
Q Consensus 215 sg~~dg~i~vwd~~-------~~~~-~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~-s~s~dg~i~iwd~--~ 281 (536)
+-..++.|..+|+. ++.. .............+... +....-..+++ +++.|+ +-+..+.|+.++. .
T Consensus 264 td~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~ 342 (496)
T 3kya_A 264 NSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEI 342 (496)
T ss_dssp EETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred EECCCCEEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCC
Confidence 66677889999987 4421 00000000000011122 22334567888 566544 4456678888654 3
Q ss_pred CceEe--Eeee-------------------ccccEEEEe-------ecCCEEEEec-CCcEEEEeCCCCcEEEEEcc---
Q 009373 282 LLKCL--KVLR-------------------HSDWVYGLA-------PHDTTVASTS-GSDVYIWDTNSGCLLTVVNG--- 329 (536)
Q Consensus 282 ~~~~~--~~~~-------------------~~~~v~~~~-------~~~~~l~~~~-d~~i~i~d~~~~~~~~~~~~--- 329 (536)
++... ..+. ++.....+. ..+.++++-. +..|+.++ .+|. +.++..
T Consensus 343 ~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~ 420 (496)
T 3kya_A 343 KKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGA 420 (496)
T ss_dssp TTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCT
T ss_pred cceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccc
Confidence 33220 1111 011022333 2345555555 68899998 4564 333321
Q ss_pred ----------cc----------ccceEEEEEeCC-CCEEEEEcCCCcEEEEEcccC
Q 009373 330 ----------AH----------VGNTKSLARSHT-GDFLFTGGEDGAIHMYEIIND 364 (536)
Q Consensus 330 ----------~~----------~~~i~~l~~~~~-~~~l~tg~~dg~i~iwd~~~~ 364 (536)
+. -.....|+++++ |.++++=..+..|+.+++...
T Consensus 421 ~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 421 STSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp THHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred cccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 10 124678999996 777777777888999988765
No 340
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=92.33 E-value=8.2 Score=37.03 Aligned_cols=258 Identities=12% Similarity=0.007 Sum_probs=142.2
Q ss_pred eEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCc-ccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeC
Q 009373 202 TIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGS-EKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDR 280 (536)
Q Consensus 202 ~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~ 280 (536)
.+..++..+...+.-..||.|+.|-.......-...... ....+. .+ .....|..++......+....||.|..|-.
T Consensus 76 ~v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~-~v-~~~~~i~~va~G~~hs~al~~~G~v~~wG~ 153 (423)
T 3mvd_K 76 DAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPD-LI-DLPGKALCISAGDSHSACLLEDGRVFAWGS 153 (423)
T ss_dssp SEEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCE-EC-CCSSCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred CceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCe-EE-cCCCCEEEEEcCcCeEEEEeCCCeEEEEeC
Confidence 467777777888888899999999754321100000000 001111 11 123468888887777777889999999975
Q ss_pred --C-CceEe--------Ee--eeccccEEEEeecC-CEEEEecCCcEEEEeCCCCc----------------------EE
Q 009373 281 --A-LLKCL--------KV--LRHSDWVYGLAPHD-TTVASTSGSDVYIWDTNSGC----------------------LL 324 (536)
Q Consensus 281 --~-~~~~~--------~~--~~~~~~v~~~~~~~-~~l~~~~d~~i~i~d~~~~~----------------------~~ 324 (536)
. .++.- .. +.....|..++... ..++...+|.|+.|-....- ..
T Consensus 154 ~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p 233 (423)
T 3mvd_K 154 FRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRP 233 (423)
T ss_dssp EECSSSEEESBTTBCEEEEEESSTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSC
T ss_pred CCCCCCCcCcCCCCCCceeeEecCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCC
Confidence 2 22210 11 11344677777444 44555568999999543210 11
Q ss_pred EEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcccc--------ccceeeeccCCCCCeEEEEEcCCeEEEE
Q 009373 325 TVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEA--------NVLLVATWIPHTGPVNSLAFEFPWLVSA 396 (536)
Q Consensus 325 ~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~--------~~~~~~~~~~h~~~v~~l~~~~~~l~s~ 396 (536)
..+.......|..++... ...++.-..+|.|..|-........ ...++.. ....|..|+....+.+.-
T Consensus 234 ~~v~~~~~~~v~~i~~g~-~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~---~~~~v~~ia~G~~ht~al 309 (423)
T 3mvd_K 234 TQLIITRAKPFEAIWATN-YCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKT---ELKDIRHIAGGQHHTVIL 309 (423)
T ss_dssp EEECCTTCCCEEEEEEET-TEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEE---CCCSEEEEEECSSEEEEE
T ss_pred eEEeecCCccEEEEEECC-cEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEc---CCCCeEEEEcccCeEEEE
Confidence 111111223455555432 2223333688999999765432110 0111111 134678888777888888
Q ss_pred eCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEEEeCCchhhH
Q 009373 397 AGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFEI 472 (536)
Q Consensus 397 s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~~ 472 (536)
..||.|+.|-....-+............... +......|..++....+.+.-..||.|+.|-....-++
T Consensus 310 t~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~-------v~~l~~~v~~ia~G~~hs~alt~~G~v~~wG~n~~GqL 378 (423)
T 3mvd_K 310 TTDLKCSVVGRPEYGRLGLGDVKDVVEKPTI-------VKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQL 378 (423)
T ss_dssp ETTCCEEEEECCGGGTTCSSSCCSCEEEEEE-------CTTCCSCEEEEEEETTEEEEEETTSCEEEEECCTTSCS
T ss_pred eCCCcEEEEECCCCCCCCCCCccccccCceE-------eccCCCCEEEEEcCCCeEEEEcCCCCEEEECCCCCCCC
Confidence 8999999998765433332221111111001 11111267788877776666688999999987764333
No 341
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=92.32 E-value=8 Score=36.90 Aligned_cols=260 Identities=14% Similarity=0.090 Sum_probs=138.8
Q ss_pred CCceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeC-CccCEEEEEEeCCEEEEEecC-CeEE
Q 009373 199 LGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWE-HEGPITSLALDLTRIYSGSWD-MTVR 276 (536)
Q Consensus 199 ~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~l~s~s~d-g~i~ 276 (536)
....|..++......+.-..||.|+.|-.......-.... ........+.. ....|..++......+....| +.|.
T Consensus 14 ~~~~v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~--~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~ 91 (406)
T 4d9s_A 14 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDA--EDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVY 91 (406)
T ss_dssp -CCCEEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSC--CCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEE
T ss_pred CccceEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCc--ccCcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEE
Confidence 3456777777777777778899999996533211000000 00001111111 124688888866666555665 4999
Q ss_pred EEeCCCc---------eEe--Eeee--ccccEEEEeecCC-EEEEecCCcEEEEeCCCC-c----------EEEEEcccc
Q 009373 277 VWDRALL---------KCL--KVLR--HSDWVYGLAPHDT-TVASTSGSDVYIWDTNSG-C----------LLTVVNGAH 331 (536)
Q Consensus 277 iwd~~~~---------~~~--~~~~--~~~~v~~~~~~~~-~l~~~~d~~i~i~d~~~~-~----------~~~~~~~~~ 331 (536)
.|-.... ... ..+. ....|..++.... .++...+|.|+.|-.... + ....+....
T Consensus 92 ~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~ 171 (406)
T 4d9s_A 92 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFE 171 (406)
T ss_dssp EEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGT
T ss_pred EEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccC
Confidence 9953321 011 1111 2336778875444 455556899999965432 1 111121111
Q ss_pred ccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccc------cccceeeeccCCCCCeEEEEEcCCeEEEEeCCCcEEEE
Q 009373 332 VGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTE------ANVLLVATWIPHTGPVNSLAFEFPWLVSAAGDGKLSLI 405 (536)
Q Consensus 332 ~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~------~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vw 405 (536)
...|..++.. ..+.++-..||.|+.|-....... ....+..........|..++....+.+.-..||.|+.|
T Consensus 172 ~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G~~ht~~l~~~G~v~~w 249 (406)
T 4d9s_A 172 GIRIKMVAAG--AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTY 249 (406)
T ss_dssp TCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEECSSEEEEEETTCCEEEE
T ss_pred CCcEEEEecC--CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEECCCcEEEEcCCCCEEEe
Confidence 2245555543 345555568999999975432211 01111111112235677888777888888899999999
Q ss_pred ECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEEEeCCch
Q 009373 406 DVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQA 469 (536)
Q Consensus 406 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~ 469 (536)
-....-+.......... .+.....-....|..++....+.+.-..||.|+.|-....
T Consensus 250 G~n~~GqlG~g~~~~~~-------~p~~v~~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~ 306 (406)
T 4d9s_A 250 GWSKYGQLGHGDLEDHL-------IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKF 306 (406)
T ss_dssp ECCTTSTTCSSSCCCEE-------EEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCTT
T ss_pred eCCCCCCCCCCCCcCcc-------ccEEecccCCCCEEEEEecCCEEEEEcCCCeEEEeeCCCC
Confidence 87654333222111110 0000111112346777777777777778999999987654
No 342
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=91.86 E-value=9.2 Score=36.57 Aligned_cols=259 Identities=14% Similarity=0.033 Sum_probs=142.3
Q ss_pred ceEEEEecCCCEEEEEeCCCcEEEEEcccCccceeccc-CcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEe
Q 009373 201 CTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDIS-GSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWD 279 (536)
Q Consensus 201 ~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd 279 (536)
..|..++......+.-..||.|+.|-.......-.... ......+.. + .-...|..++......+....||.|..|-
T Consensus 59 ~~i~~va~G~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~-v-~l~~~i~~va~G~~hs~alt~~G~v~~wG 136 (413)
T 1a12_A 59 EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGK-V-ELQEKVVQVSAGDSHTAALTDDGRVFLWG 136 (413)
T ss_dssp SCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEE-C-CCCSCEEEEEECSSEEEEEETTSCEEEEE
T ss_pred CCeEEEEeCCCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeE-e-cCCCcEEEEecCCCeEEEEcCCCcEEEee
Confidence 56777777777777778999999997643211000000 000011111 1 12347888888777777888999999996
Q ss_pred C--C-CceE-----------eEeeeccccEEEEeecC-CEEEEecCCcEEEEeCCCCcEE--------------------
Q 009373 280 R--A-LLKC-----------LKVLRHSDWVYGLAPHD-TTVASTSGSDVYIWDTNSGCLL-------------------- 324 (536)
Q Consensus 280 ~--~-~~~~-----------~~~~~~~~~v~~~~~~~-~~l~~~~d~~i~i~d~~~~~~~-------------------- 324 (536)
. . .+++ ...+.....|..++... ..++...+|.|..|-....-.+
T Consensus 137 ~~~n~~GqlG~~~~~~~~~~P~~v~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~ 216 (413)
T 1a12_A 137 SFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLL 216 (413)
T ss_dssp CEEETTEEEESSBBTBCEEEEEEECCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHH
T ss_pred CCcCCCCccCcCCccccccCCEEecCCCCEEEEEecCceEEEEcCCCCEEEeeCCCCCccCCCccccccccccccccccc
Confidence 4 2 1111 11112344677777444 4455555899999965432110
Q ss_pred --EEEccc-----cccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccc--------cccceeeeccCCCCCeEEEEEc
Q 009373 325 --TVVNGA-----HVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTE--------ANVLLVATWIPHTGPVNSLAFE 389 (536)
Q Consensus 325 --~~~~~~-----~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~--------~~~~~~~~~~~h~~~v~~l~~~ 389 (536)
..+... ....|..++... .+.++-..||.|+.|-....... ..+..+..+......|..++..
T Consensus 217 ~P~~v~~~~~g~~~~~~i~~ia~G~--~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~G 294 (413)
T 1a12_A 217 VPKCVMLKSRGSRGHVRFQDAFCGA--YFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGG 294 (413)
T ss_dssp SCEECCCBCSSCCSBCCEEEEEEET--TEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEEC
T ss_pred cCceEeeccccccCCccEEEEEeCC--CEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEEecc
Confidence 001000 123455555543 33444457899999976543211 0111222222222458888877
Q ss_pred CCeEEEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEecCCEEEEecCCCeEEEEeCCch
Q 009373 390 FPWLVSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDIGADRIVCGGEEGIVRIWNFSQA 469 (536)
Q Consensus 390 ~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~ 469 (536)
..+.++-..||.|+.|-....-+............-.. +... ..|..++....+.+.-..||.|+.|-....
T Consensus 295 ~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~-------v~~l-~~v~~v~~G~~hs~alt~~G~v~~wG~n~~ 366 (413)
T 1a12_A 295 QHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTL-------ISRL-PAVSSVACGASVGYAVTKDGRVFAWGMGTN 366 (413)
T ss_dssp SSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEE-------CCSS-SSEEEEEECSSEEEEEETTSCEEEEECCTT
T ss_pred cceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEE-------eccc-CceeEEEECcceEEEEeCCCCEEEecCCCC
Confidence 77778888999999998765433322111111100000 1111 167778877777777778999999987754
Q ss_pred hh
Q 009373 470 FE 471 (536)
Q Consensus 470 ~~ 471 (536)
.+
T Consensus 367 gq 368 (413)
T 1a12_A 367 YQ 368 (413)
T ss_dssp ST
T ss_pred CC
Confidence 33
No 343
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=90.39 E-value=11 Score=34.99 Aligned_cols=76 Identities=16% Similarity=0.153 Sum_probs=43.4
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCce--eeeeC----C-CCceEEEEecC---CCEEEEEeC-C
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFS--IASSK----P-LGCTIRAVAAD---KKLLVAGGT-D 219 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~--~~~~~----~-~~~~v~~~~~~---~~~l~sg~~-d 219 (536)
+..+-..-..-..|+|.|+|+++++ ..+|.|++++ +++. +..+. + ....-++++|+ +..|+++.. .
T Consensus 23 ~~~va~~l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 23 VEEVVGGLEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp EEEEECCCSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEC
T ss_pred EEEEECCCCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecC
Confidence 3344433445679999999996555 5679999998 4432 22221 1 11223455566 445555443 2
Q ss_pred -----CcEEEEEccc
Q 009373 220 -----GFIHCWRAVE 229 (536)
Q Consensus 220 -----g~i~vwd~~~ 229 (536)
+.|..++...
T Consensus 100 ~~~~~~~v~r~~~~~ 114 (352)
T 2ism_A 100 EGGLRNQVVRLRHLG 114 (352)
T ss_dssp TTSSEEEEEEEEECS
T ss_pred CCCCccEEEEEEeCC
Confidence 5677777653
No 344
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=87.32 E-value=27 Score=35.42 Aligned_cols=155 Identities=9% Similarity=-0.081 Sum_probs=83.4
Q ss_pred cccEEEEEEecCCC-EEEEEeCCCcEEEEECCCCceeeee--CCCCceEEEEecCCCEEEEEeC--CCcEEEEEcccCcc
Q 009373 158 TEAVLTVFVLASAK-LLFTSGYDSIVRMWHLEDGFSIASS--KPLGCTIRAVAADKKLLVAGGT--DGFIHCWRAVEVLP 232 (536)
Q Consensus 158 ~~~V~~v~~~~~~~-~l~sgs~dg~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~l~sg~~--dg~i~vwd~~~~~~ 232 (536)
-.....+++.+.+. ++++-...+.|.+.+++........ ......-+++.|.+..|+.... .+.|...++....
T Consensus 83 ~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~- 161 (619)
T 3s94_A 83 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS- 161 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS-
T ss_pred CCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc-
Confidence 35678999998555 5555566789999998754332222 1122233556666555555443 3455555543221
Q ss_pred ceecccCcccccceEEeeCCccCEEEEEEe--CCEEEEEe-cCCeEEEEeCCCceEeEeee-ccccEEEEeecCCEEEEe
Q 009373 233 HLFDISGSEKQNTQFRLWEHEGPITSLALD--LTRIYSGS-WDMTVRVWDRALLKCLKVLR-HSDWVYGLAPHDTTVAST 308 (536)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s-~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~ 308 (536)
........-.....|+++ ++.|+.+. ..+.|...|+.......... ......+++..+..++.+
T Consensus 162 ------------~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~t 229 (619)
T 3s94_A 162 ------------RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWT 229 (619)
T ss_dssp ------------CEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEE
T ss_pred ------------eEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEe
Confidence 111111223456778885 45665554 55778888886543332222 112223455444455555
Q ss_pred c--CCcEEEEeCCCCcEEE
Q 009373 309 S--GSDVYIWDTNSGCLLT 325 (536)
Q Consensus 309 ~--d~~i~i~d~~~~~~~~ 325 (536)
. .+.|...|..+++...
T Consensus 230 d~~~~~V~~~d~~tg~~~~ 248 (619)
T 3s94_A 230 DWSTHSILACNKYTGEGLR 248 (619)
T ss_dssp CTTTCSEEEEESSSCCCCE
T ss_pred cCCCCEEEEEECCCCcccE
Confidence 4 5789999987775443
No 345
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=87.07 E-value=14 Score=31.73 Aligned_cols=100 Identities=13% Similarity=-0.023 Sum_probs=57.7
Q ss_pred cCEEEEEEeC-CEEEEEecCCeEEEEeCCCceE------eEeee----ccccEEEEeecCCEEEEecCCcEEEEeCCCCc
Q 009373 254 GPITSLALDL-TRIYSGSWDMTVRVWDRALLKC------LKVLR----HSDWVYGLAPHDTTVASTSGSDVYIWDTNSGC 322 (536)
Q Consensus 254 ~~v~~l~~~~-~~l~s~s~dg~i~iwd~~~~~~------~~~~~----~~~~v~~~~~~~~~l~~~~d~~i~i~d~~~~~ 322 (536)
..+..++|++ ..|++. .+|.+.-.+..+... -..+. +.-.-.-+.+++.+.++ +||.|+-++..+..
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~ 118 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSD 118 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCST
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCC
Confidence 3667899943 235555 778877777654211 11121 11112233478888888 77998888764422
Q ss_pred EE------EEEccccccceEEEEEeCCCCEEEEEcCCCcEE
Q 009373 323 LL------TVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIH 357 (536)
Q Consensus 323 ~~------~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~ 357 (536)
.- ..+-..--..+..|.+.|+|.+.++. |+.++
T Consensus 119 ~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 119 TDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp TCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 11 11111122467999999999977776 77754
No 346
>4hfx_A Transcription elongation factor B polypeptide 3; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.54A {Homo sapiens}
Probab=85.39 E-value=0.29 Score=35.29 Aligned_cols=62 Identities=15% Similarity=0.372 Sum_probs=35.2
Q ss_pred CCcHHHHHHHhcCCChhhHHHHhhhhHHHHHHhcCChhhHHHHHhHhCCCCCCCCCCCCCCCCCCchhhhhh
Q 009373 66 DLPPALISEILNCLDPKELGIVSCVSPILHRLASDHHAWKEFYCERWGLPIASAPLGAGFSDDKSWKELFVE 137 (536)
Q Consensus 66 ~Lp~ei~~~I~~~L~~~~l~~~~~v~~~~~~l~~~~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~Wk~~~~~ 137 (536)
..|.+++.-||...+|+.|..+..-|-. -+-..+.||+.++.+.|+-. .......|+..|..
T Consensus 12 ~~Py~lL~PVLek~tp~QL~~IE~~nP~--L~~dTdeLWk~~c~rdF~~~--------~p~e~esWRelY~r 73 (97)
T 4hfx_A 12 GVPYSVLEPVLERCTPDQLYRIEEYNHV--LIEETDQLWKVHCHRDFKEE--------RPEEYESWREMYLR 73 (97)
T ss_dssp --------CCGGGCCHHHHHHHHTC--------CCHHHHHHHC----CCS--------CCCSSSCHHHHHHH
T ss_pred CCcHHHHHHHHccCCHHHHHHHHHhCcc--cchhhHHHHHHHHHhHCccc--------CCCCCCCHHHHHHH
Confidence 4688888889998999999999988863 24478899999877888521 12456789999865
No 347
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=81.98 E-value=8.4 Score=37.40 Aligned_cols=54 Identities=13% Similarity=0.042 Sum_probs=34.8
Q ss_pred cceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeeecc------CCCCCeEEEEEcC
Q 009373 333 GNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWI------PHTGPVNSLAFEF 390 (536)
Q Consensus 333 ~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~------~h~~~v~~l~~~~ 390 (536)
.....++|.|+|+++++-...+.|++++..++.. ..+..+. ........|+|+|
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~----~~~~~~~~~~~~~~g~~Gllgia~~P 86 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSV----KTVFQVPEIVNDADGQNGLLGFAFHP 86 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE----EEEEECTTCCCCTTSSCSEEEEEECT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE----eEEecCCccccccCCCCceeEEEECC
Confidence 4567999999999777765445788887654421 1222221 1356778999986
No 348
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=79.70 E-value=39 Score=31.36 Aligned_cols=189 Identities=12% Similarity=0.118 Sum_probs=95.9
Q ss_pred cEEEEEEecCCCEEEEEe------------CCCcEEEEECCCC--cee-eeeCC-----CCceEEEEe--c--CCC--EE
Q 009373 160 AVLTVFVLASAKLLFTSG------------YDSIVRMWHLEDG--FSI-ASSKP-----LGCTIRAVA--A--DKK--LL 213 (536)
Q Consensus 160 ~V~~v~~~~~~~~l~sgs------------~dg~v~iwd~~~~--~~~-~~~~~-----~~~~v~~~~--~--~~~--~l 213 (536)
..-.+...|+|..+++++ .+|.|.++|.++. +.. ..+.+ .......++ + ++. ++
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 344566778775555542 6899999998742 211 11111 011222222 2 343 33
Q ss_pred EEEeC--CCcEEEEEcccCccceecccCcccccceEEeeCC-ccCEEEEEE--eCCEEEEEe-----------------c
Q 009373 214 VAGGT--DGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEH-EGPITSLAL--DLTRIYSGS-----------------W 271 (536)
Q Consensus 214 ~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~--~~~~l~s~s-----------------~ 271 (536)
++-.. +.+|.+|++..... .......+.+. -...+++.+ ++...++.. .
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~---------~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~ 201 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEK---------SLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLA 201 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTT---------EEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCC
T ss_pred EEECCCCCCeEEEEEEECCCC---------EEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCC
Confidence 44333 56788887754321 11122233222 235677777 334444332 1
Q ss_pred CCeEEEEeCCCceEeEeeeccccEEE--EeecCCEEEEec--CCcEEEEeCCC-CcE--EEEEccccccceEEEEEeC-C
Q 009373 272 DMTVRVWDRALLKCLKVLRHSDWVYG--LAPHDTTVASTS--GSDVYIWDTNS-GCL--LTVVNGAHVGNTKSLARSH-T 343 (536)
Q Consensus 272 dg~i~iwd~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~--d~~i~i~d~~~-~~~--~~~~~~~~~~~i~~l~~~~-~ 343 (536)
.|.|.-+|. ++.......-...+. ++|+++.++.+. .+.|..|++.. +.. ...+ ...+..-.+++++ +
T Consensus 202 ~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~~g~PDGi~vD~e~ 277 (355)
T 3sre_A 202 WSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SFDTLVDNISVDPVT 277 (355)
T ss_dssp CEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSEEEEEEECTTT
T ss_pred ccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eCCCCCceEEEeCCC
Confidence 245555554 332222222223344 448888776665 68899999864 332 2233 1345677889999 5
Q ss_pred CCEEEEEcCC-CcEEEEEc
Q 009373 344 GDFLFTGGED-GAIHMYEI 361 (536)
Q Consensus 344 ~~~l~tg~~d-g~i~iwd~ 361 (536)
|++.+++..+ +.|..|+.
T Consensus 278 G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 278 GDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp CCEEEEEESCHHHHHSCCT
T ss_pred CcEEEEecCCceEEEEECC
Confidence 8877766544 34444443
No 349
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=75.76 E-value=51 Score=30.58 Aligned_cols=155 Identities=17% Similarity=0.137 Sum_probs=80.2
Q ss_pred CCCcEEEEEcccCccceecccCcccccceEEeeC-----CccCEEEEEE----eCC-EEEEEe-c--CCeEEEEeCCCc-
Q 009373 218 TDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWE-----HEGPITSLAL----DLT-RIYSGS-W--DMTVRVWDRALL- 283 (536)
Q Consensus 218 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~----~~~-~l~s~s-~--dg~i~iwd~~~~- 283 (536)
.+|.|.++|..+..... ....+.+ ..-....+.+ ++. +|+.+. . +.+|.+|++...
T Consensus 81 ~~G~I~~~d~~~~~~~~----------~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~ 150 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAV----------SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEE 150 (355)
T ss_dssp -CCEEEEEETTSSSCCE----------EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTT
T ss_pred CCCeEEEEecCCCCCce----------EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCC
Confidence 68899999986432111 1111211 1224445555 232 344432 2 467888776543
Q ss_pred -eE--eEeeec--cccEEEEe--ecCCEEEEec------------------CCcEEEEeCCCCcEEEEEccccccceEEE
Q 009373 284 -KC--LKVLRH--SDWVYGLA--PHDTTVASTS------------------GSDVYIWDTNSGCLLTVVNGAHVGNTKSL 338 (536)
Q Consensus 284 -~~--~~~~~~--~~~v~~~~--~~~~~l~~~~------------------d~~i~i~d~~~~~~~~~~~~~~~~~i~~l 338 (536)
.. +..+.+ -...+.+. ++|.++++.. .+.|.-+|. ++ +..+. ..-...+.+
T Consensus 151 ~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~-~~l~~pNGi 226 (355)
T 3sre_A 151 KSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVA-EGFDFANGI 226 (355)
T ss_dssp TEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEE-EEESSEEEE
T ss_pred CEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEee-cCCcccCcc
Confidence 21 222221 22345544 7787777643 134555555 32 22222 234467899
Q ss_pred EEeCCCCEEEEE-cCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEEcC
Q 009373 339 ARSHTGDFLFTG-GEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF 390 (536)
Q Consensus 339 ~~~~~~~~l~tg-~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~ 390 (536)
+|+||++.|..+ +..+.|..|++...... .....+ ...+....++.++
T Consensus 227 a~spDg~~lYvadt~~~~I~~~~~~~~g~l---~~~~~~-~~~g~PDGi~vD~ 275 (355)
T 3sre_A 227 NISPDGKYVYIAELLAHKIHVYEKHANWTL---TPLRVL-SFDTLVDNISVDP 275 (355)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECTTSCE---EEEEEE-ECSSEEEEEEECT
T ss_pred eECCCCCEEEEEeCCCCeEEEEEECCCCcE---ecCEEE-eCCCCCceEEEeC
Confidence 999999876665 45788999998743211 111222 1235567777764
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=75.22 E-value=47 Score=29.94 Aligned_cols=208 Identities=10% Similarity=-0.028 Sum_probs=111.0
Q ss_pred EEEecCCCEEEEEeCC--------------CcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEe--CCCcEEEEEc
Q 009373 164 VFVLASAKLLFTSGYD--------------SIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGG--TDGFIHCWRA 227 (536)
Q Consensus 164 v~~~~~~~~l~sgs~d--------------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~--~dg~i~vwd~ 227 (536)
--+++++.+|+-+... ..|+..+++.++...-.. .....++++++.|+-.. .++.-.||.+
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~---~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~ 134 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP---DPCIYASLIGNYIYYLHYDTQTATSLYRI 134 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC---SCEEEEEEETTEEEEEEESSSSCEEEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec---CCccEEEEeCCEEEEEeecCCCCceEEEE
Confidence 3467888877766542 367777777665333222 22336777888887765 3444444443
Q ss_pred ccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEec-CCeEEEEeCCCceEeEeeeccccEEEEeecCCEEE
Q 009373 228 VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSW-DMTVRVWDRALLKCLKVLRHSDWVYGLAPHDTTVA 306 (536)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~l~ 306 (536)
... + .....+..+.. ..+.++++.|+-.+. ...|..-++..+.....+..... ..+.|++..|+
T Consensus 135 ~~d--------G----s~~~~lt~~~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~-~~~~P~g~~iy 199 (302)
T 3s25_A 135 RID--------G----EEKKKIKNHYL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCNCY-KPVVLDDTNVY 199 (302)
T ss_dssp ETT--------S----CCCEEEESSCC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSCEE-EEEEEETTEEE
T ss_pred ECC--------C----CCeEEEeCCCc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCCcc-ceeeecCCEEE
Confidence 221 0 01222333322 345678887776554 67888888876655444332221 23458888877
Q ss_pred Eec-C--CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcC--CCcEEEEEcccCccccccceeeeccCCCC
Q 009373 307 STS-G--SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGE--DGAIHMYEIINDCTEANVLLVATWIPHTG 381 (536)
Q Consensus 307 ~~~-d--~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~h~~ 381 (536)
-.. + ..|..-++..... ..+.. ..+ ..++|++.+|.-++. .+.|..-++..... ..+. .+
T Consensus 200 ~t~~~~~~~I~~~~ldG~~~-~~Lt~---~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r----~~l~--~~--- 264 (302)
T 3s25_A 200 YMDVNRDNAIVHVNINNPNP-VVLTE---ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTGF----KELA--KG--- 264 (302)
T ss_dssp EEEGGGTTEEEEECSSSCCC-EECSC---SCE--EEEEEETTEEEEEECSSSCEEEEEETTSCCC----EEEE--ES---
T ss_pred EEEcCCCcEEEEEECCCCCe-EEEeC---CCc--ceEEECCCEEEEEECCCCcEEEEEECCCCcc----EEee--CC---
Confidence 655 2 3576777765543 33321 222 337888888876533 34455555544311 1111 11
Q ss_pred CeEEEEEcCCeEEEEeC-CCcEEE
Q 009373 382 PVNSLAFEFPWLVSAAG-DGKLSL 404 (536)
Q Consensus 382 ~v~~l~~~~~~l~s~s~-dg~i~v 404 (536)
.+..+...+++|+-... .+.|..
T Consensus 265 ~~~~i~i~~d~Iy~td~~~~~i~~ 288 (302)
T 3s25_A 265 EFCNINVTSQYVYFTDFVSNKEYC 288 (302)
T ss_dssp CEEEEEECSSEEEEEETTTCCEEE
T ss_pred ccceEEEeCCEEEEEECCCCeEEE
Confidence 24566666666666553 344443
No 351
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=72.75 E-value=59 Score=29.99 Aligned_cols=115 Identities=13% Similarity=0.082 Sum_probs=63.1
Q ss_pred ccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccccceeee----ccCCCCCeEEEEEcC-----CeEEEE---eCC
Q 009373 332 VGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEANVLLVAT----WIPHTGPVNSLAFEF-----PWLVSA---AGD 399 (536)
Q Consensus 332 ~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~----~~~h~~~v~~l~~~~-----~~l~s~---s~d 399 (536)
-.....++|.|+|.++++--..|.|++++..++.. ..+.. ..........|+++| ..|+.. ..+
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~----~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK----TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE----EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE----eeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 44678999999999887776689999987654421 11221 123456789999987 345443 234
Q ss_pred CcEEEEECCcccccCCCCCCCceeeEE-eeCCCeeeeccccccEEEEEecCCEEEEec
Q 009373 400 GKLSLIDVRKLLRSGRPTSGKRVSRVI-EVEPPQRMLHGFECNLLSVDIGADRIVCGG 456 (536)
Q Consensus 400 g~i~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~ 456 (536)
+.|.-|.+........ .... ...+. .+.. -..|...-+.+.+++.++++.+
T Consensus 107 ~~v~R~~~~~~~~~~~-~~~~-~~~i~~~~p~----~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 107 NRIVRMLYDEKKPSGE-QLGA-PDTVFRGIPK----GVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEEEBCTTSCTTC-CBCC-CEEEEEEECC----CSSCCCCCEEECTTSCEEEECB
T ss_pred CEEEEEEeCCCCcccc-cCCC-cEEEEEcCCC----CCCccCccccCCCCCCEEEEEC
Confidence 5566665543210000 0000 11111 1111 2346666677777777666654
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=72.36 E-value=15 Score=39.54 Aligned_cols=38 Identities=11% Similarity=0.281 Sum_probs=33.3
Q ss_pred ccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeee
Q 009373 159 EAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASS 196 (536)
Q Consensus 159 ~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~ 196 (536)
..|.+++..++..+++|-+.|+++|+|++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 35778888888899999999999999999999988764
No 353
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=71.51 E-value=61 Score=29.61 Aligned_cols=236 Identities=11% Similarity=0.059 Sum_probs=123.2
Q ss_pred CCEEEEEeCCCcEEEEECCCCc-------eee--eeCCCCceEEEE--ecCCCEEEEEeCCCcEEEEEcccCccceeccc
Q 009373 170 AKLLFTSGYDSIVRMWHLEDGF-------SIA--SSKPLGCTIRAV--AADKKLLVAGGTDGFIHCWRAVEVLPHLFDIS 238 (536)
Q Consensus 170 ~~~l~sgs~dg~v~iwd~~~~~-------~~~--~~~~~~~~v~~~--~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 238 (536)
...+++-+.+|.|+--.+.+-. -+. .+.. ...+..+ +.....|+.-+..|.++-.....-.. ..
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke-~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~----~~ 77 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQ-DDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPE----AS 77 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCG-GGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCB----CC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCC-CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcC----CC
Confidence 3467778888888865533211 111 1111 1222222 24555666677777766554322100 00
Q ss_pred Ccccccc---eEEeeCCccCEEEEEE-----eCCEEEEEecCCeEEEEeCCCce-------EeEeeeccccEEEEe---e
Q 009373 239 GSEKQNT---QFRLWEHEGPITSLAL-----DLTRIYSGSWDMTVRVWDRALLK-------CLKVLRHSDWVYGLA---P 300 (536)
Q Consensus 239 ~~~~~~~---~~~~~~h~~~v~~l~~-----~~~~l~s~s~dg~i~iwd~~~~~-------~~~~~~~~~~v~~~~---~ 300 (536)
......+ ...+. ....|.++.. +...++.++.+|.++--.+.... ....+...+.+..+. .
T Consensus 78 r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~ 156 (327)
T 3uc1_A 78 RTARGQHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSA 156 (327)
T ss_dssp SSSCCEEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECT
T ss_pred ccCCCEEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecC
Confidence 0000001 11122 2344555543 25789999999999998765422 222233445555443 4
Q ss_pred cCCEEEEecCCcEEEEeCC--CCcE-------EEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcccc---
Q 009373 301 HDTTVASTSGSDVYIWDTN--SGCL-------LTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEA--- 368 (536)
Q Consensus 301 ~~~~l~~~~d~~i~i~d~~--~~~~-------~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~--- 368 (536)
+..+++.+..|.+..+... .-.. +..+.-.....|.++...+.+..++..+..|.++.-.+..-....
T Consensus 157 ~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~ 236 (327)
T 3uc1_A 157 GDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGG 236 (327)
T ss_dssp TCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred CCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCC
Confidence 4456666668888777766 2110 111111234457777666667789999999999998876542210
Q ss_pred ccceeeeccCCCCCeEEEEE-cC-CeEEEEeCCCcEEEEECCccc
Q 009373 369 NVLLVATWIPHTGPVNSLAF-EF-PWLVSAAGDGKLSLIDVRKLL 411 (536)
Q Consensus 369 ~~~~~~~~~~h~~~v~~l~~-~~-~~l~s~s~dg~i~vwd~~~~~ 411 (536)
.-.....+..-.+.+..+.. .+ ..++..+.+|.+..++.....
T Consensus 237 ~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~i~ 281 (327)
T 3uc1_A 237 KGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQVR 281 (327)
T ss_dssp CCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGGSC
T ss_pred CcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhhcc
Confidence 01111122221333444433 33 677888888888888876543
No 354
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=70.13 E-value=68 Score=29.57 Aligned_cols=96 Identities=17% Similarity=0.098 Sum_probs=49.9
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeCC-----EEEEEecC-----
Q 009373 203 IRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLT-----RIYSGSWD----- 272 (536)
Q Consensus 203 v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~-----~l~s~s~d----- 272 (536)
-+++.++|++ +++..+|.|.+++ ++...... ..............|+++++ .|+.+...
T Consensus 35 ~ia~~pdG~l-~V~e~~g~I~~i~--~g~~~~~~--------~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 35 ALAFLPDGGM-LIAERPGRIRLFR--EGRLSTYA--------ELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp EEEECTTSCE-EEEETTTEEEEEE--TTEEEEEE--------ECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred EEEEcCCCeE-EEEeCCCeEEEEE--CCCccEee--------cceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 3556688884 4456679999887 33210000 00011122456788899543 66655432
Q ss_pred -CeEEEEeCCCce-----Ee-Eeee------ccccEEEEeecCCEEEEec
Q 009373 273 -MTVRVWDRALLK-----CL-KVLR------HSDWVYGLAPHDTTVASTS 309 (536)
Q Consensus 273 -g~i~iwd~~~~~-----~~-~~~~------~~~~v~~~~~~~~~l~~~~ 309 (536)
+.|..++...+. .+ ..+. |...-..+.++|.++++.+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 577778776431 11 1121 2222334458887777653
No 355
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=67.25 E-value=83 Score=29.46 Aligned_cols=240 Identities=12% Similarity=0.014 Sum_probs=128.9
Q ss_pred CCEEEEEeCCCcEEEEECCCC-c-------------eeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEcccCcccee
Q 009373 170 AKLLFTSGYDSIVRMWHLEDG-F-------------SIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLF 235 (536)
Q Consensus 170 ~~~l~sgs~dg~v~iwd~~~~-~-------------~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 235 (536)
....+.-..||.|..|-.... + .+..+......+.+++......+.-..||.|+.|-.......-.
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 445555567888888864321 0 11111222334566666777777788999999996543211000
Q ss_pred cccCcccccceEEeeC-CccCEEEEEEeCCEEEEEecCCeEEEEeCCCc-e----------EeEeee--ccccEEEEeec
Q 009373 236 DISGSEKQNTQFRLWE-HEGPITSLALDLTRIYSGSWDMTVRVWDRALL-K----------CLKVLR--HSDWVYGLAPH 301 (536)
Q Consensus 236 ~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~-~----------~~~~~~--~~~~v~~~~~~ 301 (536)
.. .........+.. ....|..++......+....||.|..|-.... + ....+. ....|..++..
T Consensus 142 g~--~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G 219 (389)
T 3kci_A 142 GN--RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 219 (389)
T ss_dssp SS--CCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CC--CccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc
Confidence 00 000001111111 12368888887777778888999999964321 0 111111 23456666633
Q ss_pred ---CCEEEEecCCcEEEEeCCCC-----------cEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccc
Q 009373 302 ---DTTVASTSGSDVYIWDTNSG-----------CLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTE 367 (536)
Q Consensus 302 ---~~~l~~~~d~~i~i~d~~~~-----------~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~ 367 (536)
...++...++.|..|-.... .....+.......|..++.. ....++-..||.|+.|-.......
T Consensus 220 ~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~GqL 297 (389)
T 3kci_A 220 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKGDYHRL 297 (389)
T ss_dssp CSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECCGGGTT
T ss_pred CCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCCCC
Confidence 45566666899999965421 11112211112245555544 334444568899999976432111
Q ss_pred ------cccceeeeccCCCCCeEEEEEcCCeEEEEeCCCcEEEEECCccccc
Q 009373 368 ------ANVLLVATWIPHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRKLLRS 413 (536)
Q Consensus 368 ------~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~ 413 (536)
....+..........|..|+....+.++...||.|+.|-....-+.
T Consensus 298 G~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~~GqL 349 (389)
T 3kci_A 298 GHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQL 349 (389)
T ss_dssp CSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECCTTSTT
T ss_pred CCCCCccccCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCCCCCcC
Confidence 0001111111123467788877777788889999999987754333
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=66.73 E-value=1.2e+02 Score=32.56 Aligned_cols=36 Identities=19% Similarity=0.334 Sum_probs=29.7
Q ss_pred CEEEEEE--eCCEEEEEecCCeEEEEeCCCceEeEeee
Q 009373 255 PITSLAL--DLTRIYSGSWDMTVRVWDRALLKCLKVLR 290 (536)
Q Consensus 255 ~v~~l~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 290 (536)
.+.+++. +..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 4555555 55689999999999999999999988765
No 357
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=66.62 E-value=85 Score=30.35 Aligned_cols=59 Identities=17% Similarity=0.108 Sum_probs=35.0
Q ss_pred cceEEEEEeCCCC-EEEEEcCCCcEEEEEcccCccccccceeee-cc-----CCCCCeEEEEEcCC
Q 009373 333 GNTKSLARSHTGD-FLFTGGEDGAIHMYEIINDCTEANVLLVAT-WI-----PHTGPVNSLAFEFP 391 (536)
Q Consensus 333 ~~i~~l~~~~~~~-~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~-~~-----~h~~~v~~l~~~~~ 391 (536)
.....|+|.|+|. .|+++...|.|++++.........+..+.. +. ........|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4567899999996 455566789999997533211111111111 11 12457889999984
No 358
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=66.49 E-value=62 Score=27.72 Aligned_cols=177 Identities=11% Similarity=-0.069 Sum_probs=84.5
Q ss_pred CCEEEEEeCCCcEEEEECCCCc------eeeeeCC---CCceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCc
Q 009373 170 AKLLFTSGYDSIVRMWHLEDGF------SIASSKP---LGCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGS 240 (536)
Q Consensus 170 ~~~l~sgs~dg~v~iwd~~~~~------~~~~~~~---~~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 240 (536)
..+|++...| +|+.=....+. ...++-. +...-++++|++.+.++ .+|.++-.+..+.....+-
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~---- 76 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWM---- 76 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHH----
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccc----
Confidence 3455566666 55554444433 1112211 34456778898886666 7777665554332110000
Q ss_pred ccccceEEee--CCccCEEEEEEeCC-EEEEEecCCeEEEEeCCCceEeE------eee--ccccEEEEe--ecCCEEEE
Q 009373 241 EKQNTQFRLW--EHEGPITSLALDLT-RIYSGSWDMTVRVWDRALLKCLK------VLR--HSDWVYGLA--PHDTTVAS 307 (536)
Q Consensus 241 ~~~~~~~~~~--~h~~~v~~l~~~~~-~l~s~s~dg~i~iwd~~~~~~~~------~~~--~~~~v~~~~--~~~~~l~~ 307 (536)
.....+- +-.. -.++.|+++ .|+.+ .||.|.-++..+..... .+. --..+..+. |+|.+.++
T Consensus 77 ---~s~t~IG~~Gw~~-F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav 151 (236)
T 1tl2_A 77 ---GRAKKIGNGGWNQ-FQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAV 151 (236)
T ss_dssp ---HHCEEEECSCGGG-CSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEE
T ss_pred ---ccccEeccccccc-ceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEE
Confidence 0001110 1111 356677543 33333 67999888764321111 111 012334443 88888888
Q ss_pred ecCCcEEEEeCCCCc------EEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEccc
Q 009373 308 TSGSDVYIWDTNSGC------LLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIIN 363 (536)
Q Consensus 308 ~~d~~i~i~d~~~~~------~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~ 363 (536)
. ++.++-....++. ....+-...-...+-+.|.+++.+.++. +| ++|....
T Consensus 152 ~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g--~~Y~~~~ 208 (236)
T 1tl2_A 152 H-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GG--KFYEDYP 208 (236)
T ss_dssp E-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TT--EEEEESC
T ss_pred e-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CC--eEEecCC
Confidence 8 7775433333221 1111111122234456688888877666 66 4555433
No 359
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=63.26 E-value=1.1e+02 Score=29.54 Aligned_cols=262 Identities=16% Similarity=0.141 Sum_probs=140.3
Q ss_pred CceEEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcc---------------------cccceEEeeC-------
Q 009373 200 GCTIRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSE---------------------KQNTQFRLWE------- 251 (536)
Q Consensus 200 ~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~---------------------~~~~~~~~~~------- 251 (536)
...|..++..+...+.-..||.|+.|-.......-....... .......+..
T Consensus 66 ~~~i~~va~G~~Ht~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~l~~~~ 145 (473)
T 3of7_A 66 EAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLA 145 (473)
T ss_dssp TTCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSCCC---------------------CCHHHHSCEECCGGGCHHHH
T ss_pred CCCEEEEEeCCCeEEEEecCCeEEEeECCCCCCCCCCCcccccccccccccccCccccccccccccCceecccccCCccc
Confidence 346778887777777778899999996543211000000000 0000111111
Q ss_pred CccCEEEEEEeCCEEEEEecCCeEEEEeCC---CceE------------eEeee--ccccEEEEeecCC-EEEEecCCcE
Q 009373 252 HEGPITSLALDLTRIYSGSWDMTVRVWDRA---LLKC------------LKVLR--HSDWVYGLAPHDT-TVASTSGSDV 313 (536)
Q Consensus 252 h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~---~~~~------------~~~~~--~~~~v~~~~~~~~-~l~~~~d~~i 313 (536)
....|..++......+....||.|..|-.. .++. ...+. ....|..++.... .++...+|.|
T Consensus 146 ~~~~i~~va~G~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~~G~v 225 (473)
T 3of7_A 146 EGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMV 225 (473)
T ss_dssp TTCCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEECSSEEEEEETTSCE
T ss_pred CCCcEEEEEccCCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEecCCeEEEEeCCCeE
Confidence 235788888877777778889999999741 1111 01111 2234777775444 4455558999
Q ss_pred EEEeCCCCcEE---------------EEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcccc----------
Q 009373 314 YIWDTNSGCLL---------------TVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEA---------- 368 (536)
Q Consensus 314 ~i~d~~~~~~~---------------~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~---------- 368 (536)
..|-....-.+ ..+ ....|..++.. ....++-..+|.|+.|-........
T Consensus 226 ~~wG~n~~GqLG~~~~~~~~~~~~~p~~~---~~~~v~~Ia~G--~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~ 300 (473)
T 3of7_A 226 FAWGNGQQNQLGRKVMERFRLKTLDPRPF---GLRHVKYIASG--ENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGAL 300 (473)
T ss_dssp EEEECCTTSTTSSCCCGGGTTTTCSCEEC---SCCSEEEEEEC--SSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCE
T ss_pred EEEeCCCCCCCCCCccccccccccCceec---CCcceEEEecC--CCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCce
Confidence 99965432110 011 11345555543 3445555678999999764332110
Q ss_pred ccceeeeccCCCCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccCCCCCC----------CceeeEEeeCCCeeeeccc
Q 009373 369 NVLLVATWIPHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRKLLRSGRPTSG----------KRVSRVIEVEPPQRMLHGF 438 (536)
Q Consensus 369 ~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 438 (536)
...+..........|..|+....+-+.-..||.|+.|-....-+....... ...... ..+. .+.+.
T Consensus 301 ~~~P~~v~~~~~~~i~~ia~G~~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~---~~P~-~v~~~ 376 (473)
T 3of7_A 301 VTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAV---PLPT-KLNNV 376 (473)
T ss_dssp EEEEEECCCCTTCCEEEEEECSSEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEE---EEEE-ECCSS
T ss_pred eeccccccccCCccEEEEEeCCCeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeee---ccCc-ccCCC
Confidence 001111111223568888877777777789999999986553333211100 000000 0000 11111
Q ss_pred cccEEEEEecCCEEEEecCCCeEEEEeCCchhh
Q 009373 439 ECNLLSVDIGADRIVCGGEEGIVRIWNFSQAFE 471 (536)
Q Consensus 439 ~~~v~~~~~~~~~l~sg~~Dg~i~vW~~~~~~~ 471 (536)
..|..++......+.-..||.|+.|-....-+
T Consensus 377 -~~v~~Ia~G~~hs~al~~~G~vy~wG~n~~Gq 408 (473)
T 3of7_A 377 -PKFKSVAAGSHHSVAVAQNGIAYSWGFGETYA 408 (473)
T ss_dssp -CCEEEEEECSSEEEEEETTSCEEEEECCTTCT
T ss_pred -CceEEEEeCCCeEEEEeCCCcEEEeeCCCCCC
Confidence 15778887777777778899999998776433
No 360
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=62.91 E-value=82 Score=27.89 Aligned_cols=125 Identities=13% Similarity=0.090 Sum_probs=68.8
Q ss_pred ccceEEEEEeC-CCCEEEEEcCCCcEEEEEcccCccccccceeeeccCCCCCeEEEEE-c-CCeEEEEeCCCcEEEEECC
Q 009373 332 VGNTKSLARSH-TGDFLFTGGEDGAIHMYEIINDCTEANVLLVATWIPHTGPVNSLAF-E-FPWLVSAAGDGKLSLIDVR 408 (536)
Q Consensus 332 ~~~i~~l~~~~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~-~~~l~s~s~dg~i~vwd~~ 408 (536)
...|..+.... +..+++..+.+|.++-..+..-.....-.....+... ..+..+.. + .+.++..+..|.+..++..
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkeg-D~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEG-DEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTT-CCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCC-CEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 33444443311 4678999999999999987664210111112223332 34444433 3 3689999999999998876
Q ss_pred cccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEE-e-cCCEEEEecCCCeEEEEeCCc
Q 009373 409 KLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVD-I-GADRIVCGGEEGIVRIWNFSQ 468 (536)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~-~~~~l~sg~~Dg~i~vW~~~~ 468 (536)
......+...+... .. +.. ...+.++. . .++.++..+..|.++...+..
T Consensus 146 eip~~gR~a~Gv~~---------i~-L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 146 EVPPSTPGARGVQG---------IK-LEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp GSCBCCTTCCCEEC---------CC-CCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGG
T ss_pred hCCCcCCCCCCEEE---------Ec-cCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHH
Confidence 54322222122111 00 111 12333332 2 234888889999999888764
No 361
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=61.34 E-value=1e+02 Score=28.40 Aligned_cols=57 Identities=14% Similarity=0.166 Sum_probs=33.5
Q ss_pred ccceEEEEEeCCCC-EEEEEcCCCcEEEEEcccCccccccceee-eccCCCCCeEEEEEcC
Q 009373 332 VGNTKSLARSHTGD-FLFTGGEDGAIHMYEIINDCTEANVLLVA-TWIPHTGPVNSLAFEF 390 (536)
Q Consensus 332 ~~~i~~l~~~~~~~-~l~tg~~dg~i~iwd~~~~~~~~~~~~~~-~~~~h~~~v~~l~~~~ 390 (536)
-.....++|.|+|+ +++ +...|.|++++.... ....+..+. ...........|+++|
T Consensus 17 l~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~-~~~~~~~~~~v~~~g~~g~~gia~~p 75 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLI-TLRGGELRHWQAGKG-LSAPLSGVPDVWAHGQGGLLDVVLAP 75 (353)
T ss_dssp ESSEEEEEECSTTCCEEE-EETTTEEEEEETTTE-ECCCCBSCCCCCCSTTCSEEEEEECT
T ss_pred CCCcEEEEEcCCCCEEEE-EeCCceEEEEeCCCc-eeeEecCCcccccCCCCCceeEEECC
Confidence 34578999999999 554 456799999984322 110000011 1112245678999986
No 362
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=59.79 E-value=1.1e+02 Score=28.51 Aligned_cols=135 Identities=13% Similarity=0.133 Sum_probs=75.9
Q ss_pred CeEEEEeCCCc--eEeEeeec-------cccEEEEeec---------CCEEEEec--CCcEEEEeCCCCcEEEEEcc---
Q 009373 273 MTVRVWDRALL--KCLKVLRH-------SDWVYGLAPH---------DTTVASTS--GSDVYIWDTNSGCLLTVVNG--- 329 (536)
Q Consensus 273 g~i~iwd~~~~--~~~~~~~~-------~~~v~~~~~~---------~~~l~~~~--d~~i~i~d~~~~~~~~~~~~--- 329 (536)
-.|.+||+.+. +.++.+.. ...+..+.-+ +.++..+. ...|.|+|+.+++..+....
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 35778888888 88877752 2334555422 33444443 57899999999887665520
Q ss_pred ----------cc----ccceEEEEEeCC----CCEEEEEcCCCcEEEEEcccC-----ccccccceeeeccCCCCCeEEE
Q 009373 330 ----------AH----VGNTKSLARSHT----GDFLFTGGEDGAIHMYEIIND-----CTEANVLLVATWIPHTGPVNSL 386 (536)
Q Consensus 330 ----------~~----~~~i~~l~~~~~----~~~l~tg~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~h~~~v~~l 386 (536)
+. ...+..++++|+ ++.|.-....+ -++|.+.+. .....++.+.. ++..+.-..+
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~-kg~~s~~~~~ 280 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGN-RGKYNDAIAL 280 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEE-CCTTCCEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeee-cCCCCCcceE
Confidence 00 136788888887 66666655544 244554432 11111222221 1111233455
Q ss_pred EEc-C-C-eEEEEeCCCcEEEEECCc
Q 009373 387 AFE-F-P-WLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 387 ~~~-~-~-~l~s~s~dg~i~vwd~~~ 409 (536)
+++ . . .+++--....|..|+..+
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 665 2 3 445555678899999865
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=59.59 E-value=14 Score=37.69 Aligned_cols=37 Identities=8% Similarity=0.178 Sum_probs=32.4
Q ss_pred cCEEEEEEeCCEEEEEecCCeEEEEeCCCceEeEeee
Q 009373 254 GPITSLALDLTRIYSGSWDMTVRVWDRALLKCLKVLR 290 (536)
Q Consensus 254 ~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 290 (536)
..|.++.++..++++-+.|+++|+||+.+++++....
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4577777788999999999999999999999888766
No 364
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=58.24 E-value=1.1e+02 Score=28.05 Aligned_cols=77 Identities=14% Similarity=0.051 Sum_probs=43.3
Q ss_pred eeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCc-eeeeeC---CCCceE--EEEecC---CCEEEEEeC---
Q 009373 151 IDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGF-SIASSK---PLGCTI--RAVAAD---KKLLVAGGT--- 218 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~-~~~~~~---~~~~~v--~~~~~~---~~~l~sg~~--- 218 (536)
+..+..--..-..|+|.|+|+++++ ..+|.|++++ .+++ .+..+. ...... +++.|+ +..|+++..
T Consensus 21 ~~~va~~l~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~ 98 (354)
T 3a9g_A 21 ISEVASDLEVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFA 98 (354)
T ss_dssp EEEEECSCSCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred EEEEeCCCCCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccC
Confidence 3444433456789999999985554 5669999997 4454 222221 111223 455565 445555443
Q ss_pred -C----CcEEEEEccc
Q 009373 219 -D----GFIHCWRAVE 229 (536)
Q Consensus 219 -d----g~i~vwd~~~ 229 (536)
+ ..|..|+...
T Consensus 99 ~~~~~~~~v~r~~~~~ 114 (354)
T 3a9g_A 99 EGGHIRNRVIRGRLDG 114 (354)
T ss_dssp GGGCEEEEEEEEEECS
T ss_pred CCCCcceEEEEEEECC
Confidence 2 5666676544
No 365
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=57.67 E-value=82 Score=31.30 Aligned_cols=87 Identities=14% Similarity=0.089 Sum_probs=66.1
Q ss_pred EEEEecCCeEEEEeCCCceEeEeee---cc---c------------------------cEEEEe---ecCCEEEEec--C
Q 009373 266 IYSGSWDMTVRVWDRALLKCLKVLR---HS---D------------------------WVYGLA---PHDTTVASTS--G 310 (536)
Q Consensus 266 l~s~s~dg~i~iwd~~~~~~~~~~~---~~---~------------------------~v~~~~---~~~~~l~~~~--d 310 (536)
|.||+..|.|+|+-+.+++.+..+. .. + +-.+.. .+|++++... +
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 7789999999999999998887764 00 0 112222 6788999887 5
Q ss_pred CcEEEEeCCCCcEEEEEccccccceEEEEEe--CCCCEEEEEcC
Q 009373 311 SDVYIWDTNSGCLLTVVNGAHVGNTKSLARS--HTGDFLFTGGE 352 (536)
Q Consensus 311 ~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~--~~~~~l~tg~~ 352 (536)
..|-..++...++-..+.......+..+.+. |+..+++.+++
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e 196 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAE 196 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEEC
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecce
Confidence 7788899999888777666677788888886 67888888876
No 366
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=51.32 E-value=1.8e+02 Score=28.11 Aligned_cols=207 Identities=15% Similarity=0.098 Sum_probs=111.3
Q ss_pred ceEEEEecCCCEEEEEeCCCcEEEEEccc---CccceecccCcccccceEEeeC-CccCEEEEEEeCCEEEEEecCCeEE
Q 009373 201 CTIRAVAADKKLLVAGGTDGFIHCWRAVE---VLPHLFDISGSEKQNTQFRLWE-HEGPITSLALDLTRIYSGSWDMTVR 276 (536)
Q Consensus 201 ~~v~~~~~~~~~l~sg~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~l~s~s~dg~i~ 276 (536)
..|..++......+.-..||.|+.|-... +..-... ...........+.. ....|..++......+....+|.|.
T Consensus 148 ~~i~~va~G~~hs~alt~~G~vy~wG~n~~~~GqLG~~~-~~~~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~~G~v~ 226 (473)
T 3of7_A 148 HKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQ-DKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVF 226 (473)
T ss_dssp CCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESBT-TTBSCEEEEEECCCCCSSCEEEEEECSSEEEEEETTSCEE
T ss_pred CcEEEEEccCCEEEEEeCCCeEEEeeCCcCCCCccCCCC-CCCccccCcEEccccCCCCEEEEEecCCeEEEEeCCCeEE
Confidence 56777777777777778999999997521 1100000 00000001111111 1235888888777888888999999
Q ss_pred EEeCCCceEeE----------ee----eccccEEEEeecCC-EEEEecCCcEEEEeCCCC------------cE---EEE
Q 009373 277 VWDRALLKCLK----------VL----RHSDWVYGLAPHDT-TVASTSGSDVYIWDTNSG------------CL---LTV 326 (536)
Q Consensus 277 iwd~~~~~~~~----------~~----~~~~~v~~~~~~~~-~l~~~~d~~i~i~d~~~~------------~~---~~~ 326 (536)
.|-....-.+. .+ -....|..++.... .++...+|.|+.|-.... .. ...
T Consensus 227 ~wG~n~~GqLG~~~~~~~~~~~~~p~~~~~~~v~~Ia~G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~P~~ 306 (473)
T 3of7_A 227 AWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKR 306 (473)
T ss_dssp EEECCTTSTTSSCCCGGGTTTTCSCEECSCCSEEEEEECSSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCEEEEEEE
T ss_pred EEeCCCCCCCCCCccccccccccCceecCCcceEEEecCCCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCceeecccc
Confidence 99643211100 00 01145677774444 455555899999954321 11 111
Q ss_pred EccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccc------------------cceeeeccCCCCCeEEEEE
Q 009373 327 VNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEAN------------------VLLVATWIPHTGPVNSLAF 388 (536)
Q Consensus 327 ~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~------------------~~~~~~~~~h~~~v~~l~~ 388 (536)
+.......|..++.. ....++-..||.|+.|-......... .............|..|+.
T Consensus 307 v~~~~~~~i~~ia~G--~~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~~v~~Ia~ 384 (473)
T 3of7_A 307 LALPDNVVIRSIAAG--EHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAA 384 (473)
T ss_dssp CCCCTTCCEEEEEEC--SSEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECCSSCCEEEEEE
T ss_pred ccccCCccEEEEEeC--CCeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccCCCCceEEEEe
Confidence 111112345555543 23344446788888887543221100 0001111111226788887
Q ss_pred cCCeEEEEeCCCcEEEEECCcc
Q 009373 389 EFPWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 389 ~~~~l~s~s~dg~i~vwd~~~~ 410 (536)
...+.++-..||.|+.|-....
T Consensus 385 G~~hs~al~~~G~vy~wG~n~~ 406 (473)
T 3of7_A 385 GSHHSVAVAQNGIAYSWGFGET 406 (473)
T ss_dssp CSSEEEEEETTSCEEEEECCTT
T ss_pred CCCeEEEEeCCCcEEEeeCCCC
Confidence 7777778889999999987654
No 367
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=50.18 E-value=1.7e+02 Score=27.60 Aligned_cols=245 Identities=10% Similarity=-0.091 Sum_probs=131.7
Q ss_pred cEEEEEEecCCCEEEEEeCCCcEEEEECCCC-c-----------eeeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEEc
Q 009373 160 AVLTVFVLASAKLLFTSGYDSIVRMWHLEDG-F-----------SIASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWRA 227 (536)
Q Consensus 160 ~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~-~-----------~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd~ 227 (536)
.|..|+. .+.+.+.-..||.|..|-.... + ...........+..++......+.-..||.|+.|-.
T Consensus 76 ~v~~va~--G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G~~hs~al~~~G~v~~wG~ 153 (423)
T 3mvd_K 76 DAVDISA--GGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGS 153 (423)
T ss_dssp SEEEEEE--CSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred CceEEee--CCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcCcCeEEEEeCCCeEEEEeC
Confidence 4655554 3556666678999999965331 1 001111123457777777777777789999999975
Q ss_pred --ccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceE--------------------
Q 009373 228 --VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKC-------------------- 285 (536)
Q Consensus 228 --~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~-------------------- 285 (536)
..... +-....... ...........|..++......+....||.|..|-....-.
T Consensus 154 ~~n~~Gq-lG~~~~~~~--~~p~~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~ 230 (423)
T 3mvd_K 154 FRDSHGN-MGLTIDGNK--RTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDL 230 (423)
T ss_dssp EECSSSE-EESBTTBCE--EEEEESSTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTT
T ss_pred CCCCCCC-cCcCCCCCC--ceeeEecCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccc
Confidence 22110 000000000 11111123456888888777778888999999995322100
Q ss_pred --eEee--eccccEEEEeecCCE-EEE-ecCCcEEEEeCCCC-----------cEEEEEccccccceEEEEEeCCCCEEE
Q 009373 286 --LKVL--RHSDWVYGLAPHDTT-VAS-TSGSDVYIWDTNSG-----------CLLTVVNGAHVGNTKSLARSHTGDFLF 348 (536)
Q Consensus 286 --~~~~--~~~~~v~~~~~~~~~-l~~-~~d~~i~i~d~~~~-----------~~~~~~~~~~~~~i~~l~~~~~~~~l~ 348 (536)
...+ .....|..+...... ++. ..++.|..|-.... ........ ....|..++.. ..+.+
T Consensus 231 ~~p~~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~-~~~~v~~ia~G--~~ht~ 307 (423)
T 3mvd_K 231 LRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKT-ELKDIRHIAGG--QHHTV 307 (423)
T ss_dssp SSCEEECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEE-CCCSEEEEEEC--SSEEE
T ss_pred cCCeEEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEc-CCCCeEEEEcc--cCeEE
Confidence 0111 123355666643333 333 34888988854321 11111110 12345555543 34445
Q ss_pred EEcCCCcEEEEEcccCccc------cccceeeeccCCCCCeEEEEEcCCeEEEEeCCCcEEEEECCcccc
Q 009373 349 TGGEDGAIHMYEIINDCTE------ANVLLVATWIPHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRKLLR 412 (536)
Q Consensus 349 tg~~dg~i~iwd~~~~~~~------~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~ 412 (536)
+-..||.|+.|-....... ........+..-...|..|+....+-++-..||.|+.|-....-+
T Consensus 308 alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~hs~alt~~G~v~~wG~n~~Gq 377 (423)
T 3mvd_K 308 ILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQ 377 (423)
T ss_dssp EEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTEEEEEETTSCEEEEECCTTSC
T ss_pred EEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCCeEEEEcCCCCEEEECCCCCCC
Confidence 5567899999975432111 000111111222237888888777777778999999998765433
No 368
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=47.91 E-value=1.6e+02 Score=26.58 Aligned_cols=195 Identities=13% Similarity=0.087 Sum_probs=104.7
Q ss_pred eCCEEEEEecCCeEEEEeCCCceEe---------EeeeccccEEEEe---ecCCEEEEecCCcEEEEeC---CCCcEEE-
Q 009373 262 DLTRIYSGSWDMTVRVWDRALLKCL---------KVLRHSDWVYGLA---PHDTTVASTSGSDVYIWDT---NSGCLLT- 325 (536)
Q Consensus 262 ~~~~l~s~s~dg~i~iwd~~~~~~~---------~~~~~~~~v~~~~---~~~~~l~~~~d~~i~i~d~---~~~~~~~- 325 (536)
+...+++.+.+|.|+--.+...+.. ..+...+.+..+. .+..+++.+..|.++-+.. .......
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~ 86 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASK 86 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC------
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCC
Confidence 3456888899999988765433211 1123444444433 4445566666777665544 2221000
Q ss_pred ------EEccccccceEEEEEeC---CCCEEEEEcCCCcEEEEEcccCcccc-ccceeeeccCCCCCeEEEEE-cC-CeE
Q 009373 326 ------VVNGAHVGNTKSLARSH---TGDFLFTGGEDGAIHMYEIINDCTEA-NVLLVATWIPHTGPVNSLAF-EF-PWL 393 (536)
Q Consensus 326 ------~~~~~~~~~i~~l~~~~---~~~~l~tg~~dg~i~iwd~~~~~~~~-~~~~~~~~~~h~~~v~~l~~-~~-~~l 393 (536)
.+.......|.++...+ +..+++..+..|.++...+..-.... .-.....+.. ...+..+.. ++ ..+
T Consensus 87 G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i 165 (312)
T 1suu_A 87 GQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKV 165 (312)
T ss_dssp -CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEE
T ss_pred CcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEE
Confidence 00011223455554333 45678888999999998875542111 1122223444 445555444 43 679
Q ss_pred EEEeCCCcEEEEECCcccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEe--cCCEEEEecCCCeEEEEeCCc
Q 009373 394 VSAAGDGKLSLIDVRKLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDI--GADRIVCGGEEGIVRIWNFSQ 468 (536)
Q Consensus 394 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~sg~~Dg~i~vW~~~~ 468 (536)
+..+.+|.+..+.........+...+..... +.. ...+.++.. .++.+++.+..|..+..++..
T Consensus 166 ~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~----------L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 166 ICLSKKGSAFIFNSRDVRLTNRGTQGVCGMK----------LKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEETTSEEEEEEGGGSCBCCTTBCCEECCC----------CCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEeCCCcEEEEEHHHccccCCCCCCeEeEE----------eCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 9999999999999876433222222221111 111 233344432 345788889999999988865
No 369
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=47.28 E-value=27 Score=35.70 Aligned_cols=36 Identities=11% Similarity=0.213 Sum_probs=29.5
Q ss_pred ccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeee
Q 009373 159 EAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASS 196 (536)
Q Consensus 159 ~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~ 196 (536)
..|.++.+ +..+++|-+.|.++|+|++.+++++.+.
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 45666655 4789999999999999999999877654
No 370
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=46.82 E-value=15 Score=40.63 Aligned_cols=38 Identities=11% Similarity=0.281 Sum_probs=31.9
Q ss_pred ccEEEEEEecCCCEEEEEeCCCcEEEEECCCCceeeee
Q 009373 159 EAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGFSIASS 196 (536)
Q Consensus 159 ~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~ 196 (536)
..|.+++..++..+++|-+.|+++|||++.+++++.+.
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 34556667778899999999999999999999888764
No 371
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=45.10 E-value=2.2e+02 Score=27.35 Aligned_cols=43 Identities=9% Similarity=0.095 Sum_probs=29.7
Q ss_pred cceeeeeCccccEEEEEEecCCCEEEEEeCCCcEEEEECCCCc
Q 009373 149 YSIDVLYGHTEAVLTVFVLASAKLLFTSGYDSIVRMWHLEDGF 191 (536)
Q Consensus 149 ~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~~ 191 (536)
+.+..+...-..-..|+|.|+|+++++-...+.|++++..++.
T Consensus 17 f~~~~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~ 59 (454)
T 1cru_A 17 FDKKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGS 59 (454)
T ss_dssp SCEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred eEEEEEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc
Confidence 3445554444566799999999977775544578888876554
No 372
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=44.50 E-value=69 Score=35.27 Aligned_cols=29 Identities=17% Similarity=0.303 Sum_probs=25.7
Q ss_pred eCCEEEEEecCCeEEEEeCCCceEeEeee
Q 009373 262 DLTRIYSGSWDMTVRVWDRALLKCLKVLR 290 (536)
Q Consensus 262 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 290 (536)
+..++++-+.|+++|+|++.+++++.+..
T Consensus 248 ~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 248 TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 55789999999999999999999988765
No 373
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=43.66 E-value=80 Score=31.34 Aligned_cols=66 Identities=6% Similarity=-0.080 Sum_probs=48.2
Q ss_pred EEeecCCEEEEec--CCcEEEEeCCCC------cE-------EEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEc
Q 009373 297 GLAPHDTTVASTS--GSDVYIWDTNSG------CL-------LTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEI 361 (536)
Q Consensus 297 ~~~~~~~~l~~~~--d~~i~i~d~~~~------~~-------~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~ 361 (536)
.++|+|+++++++ +.++.++|.+.- +. .... .-.-.....+|.++|....+---|..|..|++
T Consensus 329 ~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~--e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 329 NTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP--ELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp EECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC--BCCSCEEEEEECSSSEEEEEETTTTEEEEEEH
T ss_pred eeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec--cCCCcccEEEECCCCceEeeeeecceEEEEec
Confidence 3459999999988 789999998742 11 2222 13345677899999966666678999999999
Q ss_pred ccC
Q 009373 362 IND 364 (536)
Q Consensus 362 ~~~ 364 (536)
...
T Consensus 407 ~~a 409 (638)
T 3sbq_A 407 EEA 409 (638)
T ss_dssp HHH
T ss_pred cHH
Confidence 753
No 374
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=43.64 E-value=1.8e+02 Score=26.02 Aligned_cols=205 Identities=13% Similarity=0.021 Sum_probs=107.9
Q ss_pred cCCCEEEEEe--CCCcEEEEECCCCceeeeeCCCCceEEEEecCCCEEEEEeCC--------------CcEEEEEcccCc
Q 009373 168 ASAKLLFTSG--YDSIVRMWHLEDGFSIASSKPLGCTIRAVAADKKLLVAGGTD--------------GFIHCWRAVEVL 231 (536)
Q Consensus 168 ~~~~~l~sgs--~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~d--------------g~i~vwd~~~~~ 231 (536)
+++..++-.. .++.|...+.+... ...+.. ..+..+.++++.|+-.... ..|+..++....
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~--~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~ 99 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSN--DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG 99 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEE--EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccC--CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc
Confidence 3455555443 24556666654333 332322 2345667888877776543 245555554431
Q ss_pred cceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEe----cCCeEEEEeCCCceEeEeee-ccccEEEEeecCCEEE
Q 009373 232 PHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGS----WDMTVRVWDRALLKCLKVLR-HSDWVYGLAPHDTTVA 306 (536)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s----~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~l~ 306 (536)
...+. ......++.+++.|+-.. .+..|..-++.... ...+. +.. ..+.+.++.|+
T Consensus 100 --------------~~~l~--~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~--~~~~~~g~~iy 160 (302)
T 3s25_A 100 --------------STVLD--PDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL--FTCNTSDRYFY 160 (302)
T ss_dssp --------------CEEEE--CSCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC--CCSEEETTEEE
T ss_pred --------------ceEee--cCCccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc--eEeeEECCEEE
Confidence 11121 123335666888887765 33455555665433 33333 322 34568888877
Q ss_pred Eec--CCcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEEcCCC--cEEEEEcccCccccccceeeeccCCCCC
Q 009373 307 STS--GSDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDG--AIHMYEIINDCTEANVLLVATWIPHTGP 382 (536)
Q Consensus 307 ~~~--d~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg--~i~iwd~~~~~~~~~~~~~~~~~~h~~~ 382 (536)
-.+ ...|...++..+.....+. + ... ..+.|++.+|+-...++ .|..-++.... ...+. ...
T Consensus 161 ~t~~g~~~Iy~~~l~g~~~~~l~~-~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-------~~~Lt--~~~ 226 (302)
T 3s25_A 161 YNNPKNGQLYRYDTASQSEALFYD-C---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-------PVVLT--EAN 226 (302)
T ss_dssp EECTTTCCEEEEETTTTEEEEEEC-S---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-------CEECS--CSC
T ss_pred EEeCCCceEEEEECCCCCEEEEeC-C---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-------eEEEe--CCC
Confidence 666 3678888887765444332 1 222 34668888877655433 45444544431 11222 233
Q ss_pred eEEEEEcCCeEEEEeC--CCcEEEEECC
Q 009373 383 VNSLAFEFPWLVSAAG--DGKLSLIDVR 408 (536)
Q Consensus 383 v~~l~~~~~~l~s~s~--dg~i~vwd~~ 408 (536)
+..++..+.+|+-++. .+.|..-++.
T Consensus 227 ~~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 227 IEHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp EEEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred cceEEECCCEEEEEECCCCcEEEEEECC
Confidence 4556667777776533 3455555554
No 375
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=43.53 E-value=2.1e+02 Score=27.55 Aligned_cols=40 Identities=13% Similarity=0.167 Sum_probs=27.5
Q ss_pred cceeeeeCccccEEEEEEecCCC-EEEEEeCCCcEEEEECC
Q 009373 149 YSIDVLYGHTEAVLTVFVLASAK-LLFTSGYDSIVRMWHLE 188 (536)
Q Consensus 149 ~~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~dg~v~iwd~~ 188 (536)
+.+.++..--..-+.|+|.|++. .|+.+...|.|++++..
T Consensus 4 f~v~~va~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 4 FCIQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp EEEEEEEEEESSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred eEEEEeccCCCCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 34444444345567899999986 45555778999999754
No 376
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=40.97 E-value=2e+02 Score=25.80 Aligned_cols=241 Identities=12% Similarity=0.064 Sum_probs=124.2
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCceee---------eeCCCCceEEEE-ecCCCEEEEEeCCCcEEEEEcccCccceecc
Q 009373 168 ASAKLLFTSGYDSIVRMWHLEDGFSIA---------SSKPLGCTIRAV-AADKKLLVAGGTDGFIHCWRAVEVLPHLFDI 237 (536)
Q Consensus 168 ~~~~~l~sgs~dg~v~iwd~~~~~~~~---------~~~~~~~~v~~~-~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 237 (536)
|+..++++.+.+|.|+--.+.+-+... .+.....-+..+ +.....|+..+..|.++-.....-...-...
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 355678889999999877765432211 112222222222 2455677777888887666553211000000
Q ss_pred cCcccccceEEeeCCccCEEEEEE-----eCCEEEEEecCCeEEEEeCCC-------ceEeEeeeccccEEEEe---ecC
Q 009373 238 SGSEKQNTQFRLWEHEGPITSLAL-----DLTRIYSGSWDMTVRVWDRAL-------LKCLKVLRHSDWVYGLA---PHD 302 (536)
Q Consensus 238 ~~~~~~~~~~~~~~h~~~v~~l~~-----~~~~l~s~s~dg~i~iwd~~~-------~~~~~~~~~~~~v~~~~---~~~ 302 (536)
.+ ........+. ....|.++.. ++.+++..+.+|.++--.+.. +.....+...+.+..+. .+.
T Consensus 81 ~G-~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 81 RG-RPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGED 158 (307)
T ss_dssp CC-EEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTC
T ss_pred CC-eEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCC
Confidence 00 0000111122 2334555533 345799999999999987642 11222223335555543 334
Q ss_pred CEEEEecCCcEEEEeCCCC-------cEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccc---cccce
Q 009373 303 TTVASTSGSDVYIWDTNSG-------CLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTE---ANVLL 372 (536)
Q Consensus 303 ~~l~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~---~~~~~ 372 (536)
.+++.+.+|.+..++...- .-+.-+.-.....|.++...+++..+++.+..|.++-.++..-... ..-..
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~ 238 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVI 238 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEE
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEE
Confidence 4666666888777765321 1111121123445666665555667888899999998887543211 01011
Q ss_pred eeeccCCCCCeEEEEE-c-CCeEEEEeCCCcEEEEECCcc
Q 009373 373 VATWIPHTGPVNSLAF-E-FPWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 373 ~~~~~~h~~~v~~l~~-~-~~~l~s~s~dg~i~vwd~~~~ 410 (536)
...+....+.+-.+.. . ..-++..+.+|.+.-+++...
T Consensus 239 ~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~i 278 (307)
T 1zi0_A 239 SIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEI 278 (307)
T ss_dssp SSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGGS
T ss_pred eeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEecccc
Confidence 2223333345554444 3 356778888888887777654
No 377
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=39.03 E-value=96 Score=30.83 Aligned_cols=39 Identities=18% Similarity=0.214 Sum_probs=29.2
Q ss_pred cEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEE
Q 009373 312 DVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTG 350 (536)
Q Consensus 312 ~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg 350 (536)
.+..++..+++....+.......++.++|+||++.|+++
T Consensus 510 ~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 510 QMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 577778878876665533345679999999999988765
No 378
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=38.68 E-value=2.3e+02 Score=25.77 Aligned_cols=193 Identities=12% Similarity=0.124 Sum_probs=101.9
Q ss_pred CEEEEEecCCeEEEEeCCCce-------Ee--EeeeccccEEEEe---ecCCEEEEecCCcEEE---EeCCCC------c
Q 009373 264 TRIYSGSWDMTVRVWDRALLK-------CL--KVLRHSDWVYGLA---PHDTTVASTSGSDVYI---WDTNSG------C 322 (536)
Q Consensus 264 ~~l~s~s~dg~i~iwd~~~~~-------~~--~~~~~~~~v~~~~---~~~~~l~~~~d~~i~i---~d~~~~------~ 322 (536)
..+++.+.+|.|+--.+.+.+ -. ..+...+.+..+. .+..+++.++.|.++- |++... .
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~ 83 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ 83 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence 356778888888865533211 11 1223444554443 4455666666676544 444432 2
Q ss_pred EEEEEc-cccccceEEEEEeC---CCCEEEEEcCCCcEEEEEcccCccccc-cceeeeccCCCCCeEEEEE-c-CCeEEE
Q 009373 323 LLTVVN-GAHVGNTKSLARSH---TGDFLFTGGEDGAIHMYEIINDCTEAN-VLLVATWIPHTGPVNSLAF-E-FPWLVS 395 (536)
Q Consensus 323 ~~~~~~-~~~~~~i~~l~~~~---~~~~l~tg~~dg~i~iwd~~~~~~~~~-~~~~~~~~~h~~~v~~l~~-~-~~~l~s 395 (536)
++..+. ......|.++..-+ +..++++.+.+|.++--.+........ -.....+... ..+..+.. + .+.|+.
T Consensus 84 ~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~~~~d~ill 162 (327)
T 3uc1_A 84 HVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLCSAGDDLLL 162 (327)
T ss_dssp EHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEECTTCEEEE
T ss_pred EHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEEecCCCEEEE
Confidence 221111 11234555554433 467999999999999998766422111 1112233333 33444333 3 378999
Q ss_pred EeCCCcEEEEECC--cccccCCCCCCCceeeEEeeCCCeeeeccccccEEEEEe--cCCEEEEecCCCeEEEEeCCc
Q 009373 396 AAGDGKLSLIDVR--KLLRSGRPTSGKRVSRVIEVEPPQRMLHGFECNLLSVDI--GADRIVCGGEEGIVRIWNFSQ 468 (536)
Q Consensus 396 ~s~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~sg~~Dg~i~vW~~~~ 468 (536)
.+..|.+..+.+. ..........+.... .+. ....|.++.. .+.+++..+..|.++.-.+..
T Consensus 163 ~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i----------~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 163 VSANGQSIRFSATDEALRPMGRATSGVQGM----------RFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp EETTSEEEEEECCTTTSCCCCTTSBCEESS----------CCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EECCCeEEEEECcccccCcCCcCCCCeeee----------cCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 9999999998887 432222211221110 011 1233444433 234889999999998877654
No 379
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=36.47 E-value=2.5e+02 Score=25.66 Aligned_cols=136 Identities=13% Similarity=0.024 Sum_probs=68.1
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEEEEEEeC-----CEEEEEec----C-
Q 009373 203 IRAVAADKKLLVAGGTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDL-----TRIYSGSW----D- 272 (536)
Q Consensus 203 v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~s~----d- 272 (536)
-+++.++++ |+++..+|.|.+++. ++...+..+ . ...........|++++ ..|+.+.. +
T Consensus 33 ~ia~~pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~-------~--v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 33 SIAPLGGGR-YLVTERPGRLVLISP-SGKKLVASF-------D--VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG 101 (354)
T ss_dssp EEEEEETTE-EEEEETTTEEEEECS-SCEEEEEEC-------C--CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred EEEEcCCCe-EEEEeCCCEEEEEeC-CCceEeecc-------c--eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence 345668887 555566699988863 221000000 0 0112235678899954 46655543 3
Q ss_pred ---CeEEEEeCCCc-------eEe-Eeee----ccccEEEEeecCCEEEEecC--------------CcEEEEeCCCCc-
Q 009373 273 ---MTVRVWDRALL-------KCL-KVLR----HSDWVYGLAPHDTTVASTSG--------------SDVYIWDTNSGC- 322 (536)
Q Consensus 273 ---g~i~iwd~~~~-------~~~-~~~~----~~~~v~~~~~~~~~l~~~~d--------------~~i~i~d~~~~~- 322 (536)
..|..|+.... +.+ ..+. |...-..+.+++.++++.++ +.|.-++....-
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p 181 (354)
T 3a9g_A 102 HIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP 181 (354)
T ss_dssp CEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC
T ss_pred CcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC
Confidence 56777776543 111 1121 33333445588887776543 345555543210
Q ss_pred ------EEEEEccccccceEEEEEeC-CCCEEEEE
Q 009373 323 ------LLTVVNGAHVGNTKSLARSH-TGDFLFTG 350 (536)
Q Consensus 323 ------~~~~~~~~~~~~i~~l~~~~-~~~~l~tg 350 (536)
....+..++. ....++|+| +|.++++-
T Consensus 182 ~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATE 215 (354)
T ss_dssp TTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEE
T ss_pred CCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEe
Confidence 0111111232 345789999 66655543
No 380
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=35.91 E-value=2.6e+02 Score=25.57 Aligned_cols=37 Identities=16% Similarity=0.318 Sum_probs=25.9
Q ss_pred eeeeeCccccEEEEEEecCCC-EEEEEeCCCcEEEEECC
Q 009373 151 IDVLYGHTEAVLTVFVLASAK-LLFTSGYDSIVRMWHLE 188 (536)
Q Consensus 151 ~~~l~~h~~~V~~v~~~~~~~-~l~sgs~dg~v~iwd~~ 188 (536)
+..+...-..-..|+|.|+|+ +++ +...|.|++++..
T Consensus 10 ~~~va~~l~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 10 VEVLQDKLDHPWALAFLPDNHGMLI-TLRGGELRHWQAG 47 (353)
T ss_dssp EEEEEEEESSEEEEEECSTTCCEEE-EETTTEEEEEETT
T ss_pred EEEEECCCCCcEEEEEcCCCCEEEE-EeCCceEEEEeCC
Confidence 334433344568999999999 555 5567999999854
No 381
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=33.09 E-value=2.5e+02 Score=24.65 Aligned_cols=156 Identities=14% Similarity=0.027 Sum_probs=91.0
Q ss_pred ccCEEEEEE---eCCEEEEEecCCeEEEEeCCCc------eEeEeeeccccEEEEe---ecCCEEEEecCCcEEEEeCCC
Q 009373 253 EGPITSLAL---DLTRIYSGSWDMTVRVWDRALL------KCLKVLRHSDWVYGLA---PHDTTVASTSGSDVYIWDTNS 320 (536)
Q Consensus 253 ~~~v~~l~~---~~~~l~s~s~dg~i~iwd~~~~------~~~~~~~~~~~v~~~~---~~~~~l~~~~d~~i~i~d~~~ 320 (536)
...|..+.. +...++..+.+|.++-..+... .....+...+.+..+. .+...++.+..|.+..++...
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~e 146 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVRE 146 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhh
Confidence 344544432 3468999999999999876543 2222233455555544 334456666688877776432
Q ss_pred ---------CcEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCccccc-cceeeeccCCCCCeEEEEE-c
Q 009373 321 ---------GCLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEAN-VLLVATWIPHTGPVNSLAF-E 389 (536)
Q Consensus 321 ---------~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~~-~~~~~~~~~h~~~v~~l~~-~ 389 (536)
|.....+ .....|.++...+++..++..+..|.++...+..-..... -.-+..+ ...+.+..+.. +
T Consensus 147 ip~~gR~a~Gv~~i~L--~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~ 223 (276)
T 3no0_A 147 VPPSTPGARGVQGIKL--EKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIK 223 (276)
T ss_dssp SCBCCTTCCCEECCCC--CTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEES
T ss_pred CCCcCCCCCCEEEEcc--CCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeC
Confidence 1122122 2335566666566677888999999999998765422111 0112222 22344544433 3
Q ss_pred C-CeEEEEeCCCcEEE--EECCccc
Q 009373 390 F-PWLVSAAGDGKLSL--IDVRKLL 411 (536)
Q Consensus 390 ~-~~l~s~s~dg~i~v--wd~~~~~ 411 (536)
+ +.++..+.+|.+.. ++.....
T Consensus 224 ~~~~i~~~t~~G~~ir~~~~~~~i~ 248 (276)
T 3no0_A 224 EEVELLITTKNGKAFYDKINQKDIP 248 (276)
T ss_dssp SEEEEEEEETTSCEEEEEEEGGGSC
T ss_pred CCCEEEEEcCCCeEEEeeeCHHHCC
Confidence 3 57888888999888 8876643
No 382
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=31.60 E-value=1.4e+02 Score=29.90 Aligned_cols=54 Identities=19% Similarity=0.220 Sum_probs=38.4
Q ss_pred EEeecCCEEEEecC-------------CcEEEEeCCCCcEEEEEccccccceEEEEEeCCCCEEEEE
Q 009373 297 GLAPHDTTVASTSG-------------SDVYIWDTNSGCLLTVVNGAHVGNTKSLARSHTGDFLFTG 350 (536)
Q Consensus 297 ~~~~~~~~l~~~~d-------------~~i~i~d~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~tg 350 (536)
.+++.|.++++... +.+.+.+..+++..+.+......+++.++|+||++.|++.
T Consensus 482 ~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 482 GFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred EECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34577886665442 1366778888887766655566799999999999887765
No 383
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=31.30 E-value=35 Score=20.37 Aligned_cols=27 Identities=19% Similarity=0.339 Sum_probs=20.2
Q ss_pred ccccccccccccCCcHHHHHHHhcCCC
Q 009373 54 DVLSNLHRSTITDLPPALISEILNCLD 80 (536)
Q Consensus 54 ~~~~~~~~~~l~~Lp~ei~~~I~~~L~ 80 (536)
.++++.-.+.+..||.||-.+|++--.
T Consensus 11 ~lP~~VD~eVF~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 11 ALPEGVDQEVFKQLPADIQEEILSGKS 37 (48)
T ss_dssp SSCTTCCGGGTTTSCHHHHHHHTTCCC
T ss_pred cCCCCCCHHHHHHCcHHHHHHHHhcch
Confidence 345555566789999999999997543
No 384
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=31.04 E-value=3.3e+02 Score=25.42 Aligned_cols=248 Identities=11% Similarity=-0.022 Sum_probs=134.0
Q ss_pred ccEEEEEEecCCCEEEEEeCCCcEEEEECCCC-ce-----------eeeeCCCCceEEEEecCCCEEEEEeCCCcEEEEE
Q 009373 159 EAVLTVFVLASAKLLFTSGYDSIVRMWHLEDG-FS-----------IASSKPLGCTIRAVAADKKLLVAGGTDGFIHCWR 226 (536)
Q Consensus 159 ~~V~~v~~~~~~~~l~sgs~dg~v~iwd~~~~-~~-----------~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~vwd 226 (536)
..|..|+.. ..+.+.-..||.|..|-.... +. ..........|..++......+.-..||.|+.|-
T Consensus 59 ~~i~~va~G--~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~l~~~i~~va~G~~hs~alt~~G~v~~wG 136 (413)
T 1a12_A 59 EDVVQAEAG--GMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWG 136 (413)
T ss_dssp SCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEECCCCSCEEEEEECSSEEEEEETTSCEEEEE
T ss_pred CCeEEEEeC--CCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEecCCCcEEEEecCCCeEEEEcCCCcEEEee
Confidence 556666653 445555568899999965431 10 0000112336777877777777788999999997
Q ss_pred c--ccCccceecccCcccccceEEeeCCccCEEEEEEeCCEEEEEecCCeEEEEeCCCceEe------------------
Q 009373 227 A--VEVLPHLFDISGSEKQNTQFRLWEHEGPITSLALDLTRIYSGSWDMTVRVWDRALLKCL------------------ 286 (536)
Q Consensus 227 ~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~------------------ 286 (536)
. ......-..........+. .+ .....|..++......+.-..||.|..|-....-.+
T Consensus 137 ~~~n~~GqlG~~~~~~~~~~P~-~v-~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~ 214 (413)
T 1a12_A 137 SFRDNNGVIGLLEPMKKSMVPV-QV-QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLER 214 (413)
T ss_dssp CEEETTEEEESSBBTBCEEEEE-EE-CCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHH
T ss_pred CCcCCCCccCcCCccccccCCE-Ee-cCCCCEEEEEecCceEEEEcCCCCEEEeeCCCCCccCCCccccccccccccccc
Confidence 5 2110000000000000011 11 234578888887777778889999999964321000
Q ss_pred ----Eeee-------ccccEEEEeec-CCEEEEecCCcEEEEeCCCCc-----------EEEEEccccc--cceEEEEEe
Q 009373 287 ----KVLR-------HSDWVYGLAPH-DTTVASTSGSDVYIWDTNSGC-----------LLTVVNGAHV--GNTKSLARS 341 (536)
Q Consensus 287 ----~~~~-------~~~~v~~~~~~-~~~l~~~~d~~i~i~d~~~~~-----------~~~~~~~~~~--~~i~~l~~~ 341 (536)
..+. ....|..++.. ...++...+|.|+.|-....- ....+..... ..|..++..
T Consensus 215 ~~~P~~v~~~~~g~~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~G 294 (413)
T 1a12_A 215 LLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGG 294 (413)
T ss_dssp HHSCEECCCBCSSCCSBCCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEEC
T ss_pred cccCceEeeccccccCCccEEEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEEecc
Confidence 0011 12456777743 445555568999999664311 1111111011 235555543
Q ss_pred CCCCEEEEEcCCCcEEEEEcccCcccc-----ccceeeeccCCCCCeEEEEEcCCeEEEEeCCCcEEEEECCcccc
Q 009373 342 HTGDFLFTGGEDGAIHMYEIINDCTEA-----NVLLVATWIPHTGPVNSLAFEFPWLVSAAGDGKLSLIDVRKLLR 412 (536)
Q Consensus 342 ~~~~~l~tg~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~ 412 (536)
....++-..||.|+.|-........ ..............|..|+....+.++-..||.|+.|-....-+
T Consensus 295 --~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~l~~v~~v~~G~~hs~alt~~G~v~~wG~n~~gq 368 (413)
T 1a12_A 295 --QHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQ 368 (413)
T ss_dssp --SSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCSSSSEEEEEECSSEEEEEETTSCEEEEECCTTST
T ss_pred --cceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecccCceeEEEECcceEEEEeCCCCEEEecCCCCCC
Confidence 3344455678999999754321110 00001111111237888887777888888999999998765433
No 385
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=29.87 E-value=3.4e+02 Score=25.14 Aligned_cols=243 Identities=12% Similarity=0.031 Sum_probs=124.6
Q ss_pred EecCCCEEEEEeCCCcEEEEECCC---------CceeeeeCCCCceEEEE-ecCCCEEEEEeCCCcEEEEEcccCcccee
Q 009373 166 VLASAKLLFTSGYDSIVRMWHLED---------GFSIASSKPLGCTIRAV-AADKKLLVAGGTDGFIHCWRAVEVLPHLF 235 (536)
Q Consensus 166 ~~~~~~~l~sgs~dg~v~iwd~~~---------~~~~~~~~~~~~~v~~~-~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 235 (536)
+-|+..++++.+.+|.|+--.+.+ |..-..+.....-+..+ ......|+..+..|.++-.....-.. .-
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~-~~ 81 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPE-AG 81 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCB-CC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcC-CC
Confidence 346788999999999999765422 12222333332222222 24456677778888877665432110 00
Q ss_pred cccCcccccceEEeeCCccCEEEEEE-----eCCEEEEEecCCeEEEEeCCCce-------EeEeeeccccEEEEe---e
Q 009373 236 DISGSEKQNTQFRLWEHEGPITSLAL-----DLTRIYSGSWDMTVRVWDRALLK-------CLKVLRHSDWVYGLA---P 300 (536)
Q Consensus 236 ~~~~~~~~~~~~~~~~h~~~v~~l~~-----~~~~l~s~s~dg~i~iwd~~~~~-------~~~~~~~~~~v~~~~---~ 300 (536)
....+........+. ....|.++.. ++.+|+.++..|.++--.+.... ....+...+.+..+. .
T Consensus 82 r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~ 160 (370)
T 3l6v_A 82 SNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDG 160 (370)
T ss_dssp TTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECS
T ss_pred cccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCC
Confidence 000000001111222 2345555543 23589999999999988754322 222233444554443 3
Q ss_pred cCCEEEEecCCcEEEEeCCCCc-------EEEEEccccccceEEEEEeC-------------------------------
Q 009373 301 HDTTVASTSGSDVYIWDTNSGC-------LLTVVNGAHVGNTKSLARSH------------------------------- 342 (536)
Q Consensus 301 ~~~~l~~~~d~~i~i~d~~~~~-------~~~~~~~~~~~~i~~l~~~~------------------------------- 342 (536)
+..+++.+.+|.+..|+...-. =+.-+.......|.++...+
T Consensus 161 ~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~ 240 (370)
T 3l6v_A 161 DRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDV 240 (370)
T ss_dssp CCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-----------------------------
T ss_pred CceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccccccccccccccccccc
Confidence 3445555667877777643211 11111112233455544443
Q ss_pred ----CCCEEEEEcCCCcEEEEEcccCccccc---cceeeeccCCCCCeEEEEE-cC-CeEEEEeCCCcEEEEECCcc
Q 009373 343 ----TGDFLFTGGEDGAIHMYEIINDCTEAN---VLLVATWIPHTGPVNSLAF-EF-PWLVSAAGDGKLSLIDVRKL 410 (536)
Q Consensus 343 ----~~~~l~tg~~dg~i~iwd~~~~~~~~~---~~~~~~~~~h~~~v~~l~~-~~-~~l~s~s~dg~i~vwd~~~~ 410 (536)
.+..+++.+..|..+...+..-..... -.....+....+.+..+.. .+ ..++..+..|.+.-..+...
T Consensus 241 ~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~~i 317 (370)
T 3l6v_A 241 ADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRGSEI 317 (370)
T ss_dssp ------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEGGGS
T ss_pred ccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeHhhC
Confidence 446788999999999988765422110 0111122223345554433 33 56777778888777776653
No 386
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=28.28 E-value=5e+02 Score=26.61 Aligned_cols=233 Identities=11% Similarity=0.031 Sum_probs=109.0
Q ss_pred EEEEE-EecCCCEEEEE-e----CCCcEEEEECCCCceeee-eCC-CCc--------eEEEEecCCCEEEEE--------
Q 009373 161 VLTVF-VLASAKLLFTS-G----YDSIVRMWHLEDGFSIAS-SKP-LGC--------TIRAVAADKKLLVAG-------- 216 (536)
Q Consensus 161 V~~v~-~~~~~~~l~sg-s----~dg~v~iwd~~~~~~~~~-~~~-~~~--------~v~~~~~~~~~l~sg-------- 216 (536)
...+. ++|++++++.+ | .-..++++|+.+++.+.. +.+ ... .+.++..++..+++.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 33444 78888876643 2 234699999999977642 221 111 333554333333321
Q ss_pred --eCCCcEEEEEcccCccceecccCcccccceEEeeCCccCEE-EEEE--eCC-----EEEEEecC---CeEEEEeCCC-
Q 009373 217 --GTDGFIHCWRAVEVLPHLFDISGSEKQNTQFRLWEHEGPIT-SLAL--DLT-----RIYSGSWD---MTVRVWDRAL- 282 (536)
Q Consensus 217 --~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~l~~--~~~-----~l~s~s~d---g~i~iwd~~~- 282 (536)
+....|+.|.+-+.. ......+.+....+. +... +++ .+++.+.+ ..+.+.|...
T Consensus 211 ~~~~~~~v~~~~~Gt~~-----------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 279 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESI-----------EKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYK 279 (711)
T ss_dssp TTSSBCEEEEEETTSCG-----------GGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSS
T ss_pred cCCCCCEEEEEECCCCh-----------HHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCC
Confidence 112457777765532 112222333222321 1222 444 24443322 3455556542
Q ss_pred -ceEeEeeeccccEEEEeecCCEEEEe-----------cCCcEEEEeCCCC-------cEEEE-EccccccceEEEEEeC
Q 009373 283 -LKCLKVLRHSDWVYGLAPHDTTVAST-----------SGSDVYIWDTNSG-------CLLTV-VNGAHVGNTKSLARSH 342 (536)
Q Consensus 283 -~~~~~~~~~~~~v~~~~~~~~~l~~~-----------~d~~i~i~d~~~~-------~~~~~-~~~~~~~~i~~l~~~~ 342 (536)
++.............-...+.+++.. ..+.|...|+.++ ..... +.......+..+.+..
T Consensus 280 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 359 (711)
T 4hvt_A 280 NLKLQKINMPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTK 359 (711)
T ss_dssp SCEEEECCSCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECS
T ss_pred CCcceEeecCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEEC
Confidence 33222211111111112445444422 2466888888763 12222 3333445677888886
Q ss_pred CCCEEEEEcCCCc--EEEEEcccCccccccceeeeccCCCCCeEEEEEcC---CeEEEEeCC---CcEEEEECC
Q 009373 343 TGDFLFTGGEDGA--IHMYEIINDCTEANVLLVATWIPHTGPVNSLAFEF---PWLVSAAGD---GKLSLIDVR 408 (536)
Q Consensus 343 ~~~~l~tg~~dg~--i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~d---g~i~vwd~~ 408 (536)
+ .++++...++. +.++|+.++.. ....+..+.. .+.+.....++ .++++.+.. +.+..+|+.
T Consensus 360 ~-~l~~~~~~~~~~~l~~~~~~~g~~--~~~~~i~lp~-~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 360 D-RVFLATYDNVVAKVVTFTLENEQW--TKPVVLKLPY-QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp S-CEEEEEEETTEEEEEEECEETTEE--CCCEEECCCS-TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred C-EEEEEEEECCEEEEEEEECCCCce--EEEeccCCCC-CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 5 56777777775 56666655420 0011011211 23455444432 344444432 567777764
No 387
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=27.85 E-value=3.7e+02 Score=24.90 Aligned_cols=150 Identities=11% Similarity=0.046 Sum_probs=83.2
Q ss_pred eCCEEEEEecCCeEEEEeCCC---------ceEeEeeeccccEEEEe---ecCCEEEEecCCcEEEE---eCCC------
Q 009373 262 DLTRIYSGSWDMTVRVWDRAL---------LKCLKVLRHSDWVYGLA---PHDTTVASTSGSDVYIW---DTNS------ 320 (536)
Q Consensus 262 ~~~~l~s~s~dg~i~iwd~~~---------~~~~~~~~~~~~v~~~~---~~~~~l~~~~d~~i~i~---d~~~------ 320 (536)
+...+++.+.+|.|+--.+.. +.....+...+.+..+. .+..+++.++.|.++-+ ++..
T Consensus 6 ~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~ 85 (370)
T 3l6v_A 6 PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNAR 85 (370)
T ss_dssp CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcccC
Confidence 446788899999998764422 12222333555555443 34445666667765554 4432
Q ss_pred CcEEEEE-ccccccceEEEEEeC---CCCEEEEEcCCCcEEEEEcccCcccc-ccceeeeccCCCCCeEEEEE-cC-CeE
Q 009373 321 GCLLTVV-NGAHVGNTKSLARSH---TGDFLFTGGEDGAIHMYEIINDCTEA-NVLLVATWIPHTGPVNSLAF-EF-PWL 393 (536)
Q Consensus 321 ~~~~~~~-~~~~~~~i~~l~~~~---~~~~l~tg~~dg~i~iwd~~~~~~~~-~~~~~~~~~~h~~~v~~l~~-~~-~~l 393 (536)
|..+..+ .-.....|.++...+ ++.+|+.++..|.++.-.+....... .-.....+.. ...+..+.. ++ ..|
T Consensus 86 G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i 164 (370)
T 3l6v_A 86 GRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDV 164 (370)
T ss_dssp CEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEE
T ss_pred CcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceE
Confidence 2222111 111234555554432 35689999999999999876542211 1111223333 334444443 33 678
Q ss_pred EEEeCCCcEEEEECCcccc
Q 009373 394 VSAAGDGKLSLIDVRKLLR 412 (536)
Q Consensus 394 ~s~s~dg~i~vwd~~~~~~ 412 (536)
+..+.+|.+..++......
T Consensus 165 ~l~T~~G~~irf~~~~v~~ 183 (370)
T 3l6v_A 165 LLFASNGKTVRFGESTVRS 183 (370)
T ss_dssp EEEETTSEEEEEEGGGSCB
T ss_pred EEEeCCCeEEEEEccccCc
Confidence 8899999999898765433
No 388
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=25.04 E-value=4.1e+02 Score=24.46 Aligned_cols=147 Identities=10% Similarity=-0.005 Sum_probs=67.8
Q ss_pred cCEEEEEEe---CCEEEEEecCCeEEEEeCCCceEeEeeec--------------cccEEEEe--ec-CCEEEEecCCcE
Q 009373 254 GPITSLALD---LTRIYSGSWDMTVRVWDRALLKCLKVLRH--------------SDWVYGLA--PH-DTTVASTSGSDV 313 (536)
Q Consensus 254 ~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--------------~~~v~~~~--~~-~~~l~~~~d~~i 313 (536)
..+.+|.++ ++.++.+..++.|...+- .++.-..+.. ...+.++. +. +..+.++..+.|
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl 255 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGI 255 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEE
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeE
Confidence 457788885 356666665555544432 2222111110 12366665 33 356666665556
Q ss_pred EEEeCCCCcEEEEEccccc----cceEEEEEeCC-CCEEEEEcC-----------CCcEEEEEcccCccccccceeee-c
Q 009373 314 YIWDTNSGCLLTVVNGAHV----GNTKSLARSHT-GDFLFTGGE-----------DGAIHMYEIINDCTEANVLLVAT-W 376 (536)
Q Consensus 314 ~i~d~~~~~~~~~~~~~~~----~~i~~l~~~~~-~~~l~tg~~-----------dg~i~iwd~~~~~~~~~~~~~~~-~ 376 (536)
...+- .++....+..... ..+.++.++|. ...|.++.. ++...+|...++.. ....+.. +
T Consensus 256 ~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~--tW~~~~~gl 332 (394)
T 3b7f_A 256 YRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGE--SWQRQDRGL 332 (394)
T ss_dssp EEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTS--CCEEECBTS
T ss_pred EEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCC--CceECCCCC
Confidence 55542 2333333321111 23567888763 344444432 33455666555321 1122211 1
Q ss_pred cCCC---C-CeEEEEEcC---CeEEEEeCCCcEEE
Q 009373 377 IPHT---G-PVNSLAFEF---PWLVSAAGDGKLSL 404 (536)
Q Consensus 377 ~~h~---~-~v~~l~~~~---~~l~s~s~dg~i~v 404 (536)
.... . ....++++| ..|+.++.++.|..
T Consensus 333 p~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~ 367 (394)
T 3b7f_A 333 PTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWA 367 (394)
T ss_dssp CCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEE
T ss_pred CCccccceEEEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 1100 0 113567754 56777766665543
No 389
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=22.82 E-value=4.4e+02 Score=24.08 Aligned_cols=118 Identities=15% Similarity=0.086 Sum_probs=56.5
Q ss_pred ccccEEEEeecCCEEEEecC--------------CcEEEEeCCCCc-------EEEEEccccccceEEEEEeCCCCEEEE
Q 009373 291 HSDWVYGLAPHDTTVASTSG--------------SDVYIWDTNSGC-------LLTVVNGAHVGNTKSLARSHTGDFLFT 349 (536)
Q Consensus 291 ~~~~v~~~~~~~~~l~~~~d--------------~~i~i~d~~~~~-------~~~~~~~~~~~~i~~l~~~~~~~~l~t 349 (536)
|...-..+.+++.++++.++ +.|.-++....- ....+..+|. ....++|+|+|.+.++
T Consensus 140 H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~ 218 (347)
T 3das_A 140 HNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFAS 218 (347)
T ss_dssp CCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEE
T ss_pred ccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEE
Confidence 44444455588887777542 344444543210 0112222343 3557899998876554
Q ss_pred Ec-CCCcEEEEEcccCccc------------cccceeeeccCCCCCeEEEEEcCCeEEEEe-CCCcEEEEECCc
Q 009373 350 GG-EDGAIHMYEIINDCTE------------ANVLLVATWIPHTGPVNSLAFEFPWLVSAA-GDGKLSLIDVRK 409 (536)
Q Consensus 350 g~-~dg~i~iwd~~~~~~~------------~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s-~dg~i~vwd~~~ 409 (536)
=. .|+.=.|.-+..+... ....++..+..+......++|....++.+. ..+.|....+..
T Consensus 219 d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~ 292 (347)
T 3das_A 219 EFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYAEGSVWMAGLRGERLWRIPLKG 292 (347)
T ss_dssp ECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEETTEEEEEESTTCSEEEEEEET
T ss_pred ecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEEcCceeeccccCCEEEEEEecC
Confidence 32 2333333333332110 011233334333346678888655444444 445565555543
No 390
>2lh0_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; NMR {Saccharomyces cerevisiae}
Probab=22.27 E-value=85 Score=20.87 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=24.2
Q ss_pred cccCCcHHHHHHHhcC--CChhhHHHHhhhhHH
Q 009373 63 TITDLPPALISEILNC--LDPKELGIVSCVSPI 93 (536)
Q Consensus 63 ~l~~Lp~ei~~~I~~~--L~~~~l~~~~~v~~~ 93 (536)
||..||.++..+|..- =+|+++..+..++..
T Consensus 8 wL~~LP~~Lq~kV~aIV~~~PsSl~VF~~Ly~y 40 (70)
T 2lh0_A 8 FLDELPESLSRKIGTVVRVLPSSLEIFEELYKY 40 (70)
T ss_dssp GGGGSCHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 7999999999988865 367777777766664
No 391
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=21.41 E-value=4.4e+02 Score=23.55 Aligned_cols=241 Identities=9% Similarity=0.020 Sum_probs=124.5
Q ss_pred ecCCCEEEEEeCCCcEEEEECCCCcee---------eeeCCCCceEEEE-ecCCCEEEEEeCCCcEEEEEcccCccceec
Q 009373 167 LASAKLLFTSGYDSIVRMWHLEDGFSI---------ASSKPLGCTIRAV-AADKKLLVAGGTDGFIHCWRAVEVLPHLFD 236 (536)
Q Consensus 167 ~~~~~~l~sgs~dg~v~iwd~~~~~~~---------~~~~~~~~~v~~~-~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 236 (536)
-++..++++.+.+|.|+--.+..-... ..+.....-+..+ +.....++..+..|.++-.....-...-..
T Consensus 5 i~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred cCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 356778899999999998876433211 1122222223222 245567888888898877765431100000
Q ss_pred ccCcccccceEEeeCCccCEEEEEE-----eCCEEEEEecCCeEEEEeCCCc-------eEeEeeeccccEEEEe---ec
Q 009373 237 ISGSEKQNTQFRLWEHEGPITSLAL-----DLTRIYSGSWDMTVRVWDRALL-------KCLKVLRHSDWVYGLA---PH 301 (536)
Q Consensus 237 ~~~~~~~~~~~~~~~h~~~v~~l~~-----~~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~~~~v~~~~---~~ 301 (536)
..+ ........+.. ...|.++.. +..+++..+..|.++.-.+... .....+...+.+..+. .+
T Consensus 85 ~~G-~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~ 162 (312)
T 1suu_A 85 SKG-QNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKD 162 (312)
T ss_dssp ----CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTT
T ss_pred CCC-cChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCC
Confidence 000 00001112222 234444433 2567899999999998876432 2222233455565554 33
Q ss_pred CCEEEEecCCcEEEEeCCC----C---cEEEEEccccccceEEEEEeCCCCEEEEEcCCCcEEEEEcccCcccc---ccc
Q 009373 302 DTTVASTSGSDVYIWDTNS----G---CLLTVVNGAHVGNTKSLARSHTGDFLFTGGEDGAIHMYEIINDCTEA---NVL 371 (536)
Q Consensus 302 ~~~l~~~~d~~i~i~d~~~----~---~~~~~~~~~~~~~i~~l~~~~~~~~l~tg~~dg~i~iwd~~~~~~~~---~~~ 371 (536)
..+++.+.+|.+..+.... + +=+..+.-.....+.++...+++..+++.+..|..+..++..-.... .-.
T Consensus 163 ~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~~~~~R~~kGv 242 (312)
T 1suu_A 163 EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKISELKRGATGY 242 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHHhcccCCCCCCE
Confidence 4456666688888886643 1 11122211234456666555566778888999999999886542111 111
Q ss_pred eeeecc-CCCCCeEEE-EEc-CCeEEEEeCCCcEEEEECCc
Q 009373 372 LVATWI-PHTGPVNSL-AFE-FPWLVSAAGDGKLSLIDVRK 409 (536)
Q Consensus 372 ~~~~~~-~h~~~v~~l-~~~-~~~l~s~s~dg~i~vwd~~~ 409 (536)
....+. .....+.++ .+. ..-++..+..|.+.-..+..
T Consensus 243 ~~~~~~k~~~~~lv~~~~~~~~~~l~~~t~~g~~~r~~~~~ 283 (312)
T 1suu_A 243 TSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRTVAGK 283 (312)
T ss_dssp ECSCTTCTTTCSEEEEEEECTTCEEEEEETTCEEEEEEGGG
T ss_pred EeeEccCCCCCeEEEEEEeCCCCEEEEEeCCCeEEEEEccc
Confidence 111222 223444433 343 35666777777665555554
Done!