Query 009376
Match_columns 536
No_of_seqs 199 out of 688
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 03:48:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009376.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009376hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.1 0.0017 5.8E-08 64.1 9.2 107 273-407 71-179 (261)
2 3bkx_A SAM-dependent methyltra 96.4 0.13 4.4E-06 49.3 16.8 126 263-412 34-165 (275)
3 3dp7_A SAM-dependent methyltra 95.8 0.1 3.4E-06 53.3 13.8 115 263-407 170-288 (363)
4 3dtn_A Putative methyltransfer 95.8 0.092 3.2E-06 49.1 12.4 112 262-405 33-146 (234)
5 3dh0_A SAM dependent methyltra 95.8 0.39 1.3E-05 44.2 16.4 113 262-405 27-141 (219)
6 2aot_A HMT, histamine N-methyl 95.7 0.036 1.2E-06 54.4 9.6 115 271-405 51-170 (292)
7 1vl5_A Unknown conserved prote 95.6 0.45 1.5E-05 45.3 16.7 109 264-405 29-138 (260)
8 3mgg_A Methyltransferase; NYSG 95.4 0.23 8E-06 47.6 13.8 102 272-405 37-140 (276)
9 4a6d_A Hydroxyindole O-methylt 95.2 0.034 1.2E-06 56.8 7.6 160 261-492 168-331 (353)
10 2r3s_A Uncharacterized protein 95.1 0.49 1.7E-05 46.7 15.5 116 262-409 153-274 (335)
11 2ip2_A Probable phenazine-spec 94.7 0.39 1.3E-05 47.7 13.6 115 262-408 158-274 (334)
12 3bus_A REBM, methyltransferase 94.5 1.2 4.2E-05 42.3 16.2 111 262-405 51-164 (273)
13 3i53_A O-methyltransferase; CO 94.2 0.24 8.3E-06 49.4 10.9 112 263-407 160-275 (332)
14 3dlc_A Putative S-adenosyl-L-m 94.2 0.42 1.4E-05 43.4 11.5 112 261-406 33-147 (219)
15 3ujc_A Phosphoethanolamine N-m 94.1 0.73 2.5E-05 43.3 13.5 123 251-405 34-157 (266)
16 3h2b_A SAM-dependent methyltra 94.1 0.44 1.5E-05 43.3 11.5 98 273-406 42-140 (203)
17 3mcz_A O-methyltransferase; ad 94.1 0.92 3.1E-05 45.3 14.8 115 263-407 169-288 (352)
18 1xxl_A YCGJ protein; structura 94.0 1.5 5E-05 41.3 15.3 110 263-405 12-122 (239)
19 1x19_A CRTF-related protein; m 93.6 1.1 3.7E-05 45.2 14.5 115 261-408 179-297 (359)
20 3p9c_A Caffeic acid O-methyltr 93.6 0.37 1.3E-05 49.2 11.0 107 262-407 190-299 (364)
21 3gwz_A MMCR; methyltransferase 93.5 0.6 2.1E-05 47.6 12.5 114 262-408 192-309 (369)
22 1qzz_A RDMB, aclacinomycin-10- 93.5 0.93 3.2E-05 45.6 13.7 113 262-407 172-288 (374)
23 3sm3_A SAM-dependent methyltra 93.3 0.54 1.8E-05 43.3 10.7 102 273-405 31-139 (235)
24 3reo_A (ISO)eugenol O-methyltr 93.2 0.45 1.5E-05 48.6 10.8 108 262-408 192-302 (368)
25 3htx_A HEN1; HEN1, small RNA m 92.9 0.39 1.3E-05 55.4 10.7 121 263-408 712-836 (950)
26 1tw3_A COMT, carminomycin 4-O- 92.9 1.8 6.3E-05 43.3 14.7 114 262-408 173-290 (360)
27 3jwg_A HEN1, methyltransferase 92.9 0.98 3.3E-05 41.6 11.8 117 262-408 19-142 (219)
28 4fsd_A Arsenic methyltransfera 92.4 1.2 4.2E-05 45.5 12.9 112 272-405 83-201 (383)
29 3jwh_A HEN1; methyltransferase 92.1 1.5 5.3E-05 40.3 12.1 114 263-406 20-140 (217)
30 3f4k_A Putative methyltransfer 91.7 3.5 0.00012 38.6 14.3 125 248-406 21-149 (257)
31 2fk8_A Methoxy mycolic acid sy 91.7 6.9 0.00024 38.2 16.9 109 263-405 81-192 (318)
32 3g5l_A Putative S-adenosylmeth 91.6 0.98 3.4E-05 42.6 10.3 111 261-406 33-144 (253)
33 3lst_A CALO1 methyltransferase 91.6 0.89 3E-05 45.8 10.5 110 262-407 174-287 (348)
34 3e23_A Uncharacterized protein 91.3 0.85 2.9E-05 41.7 9.3 96 273-406 44-140 (211)
35 1xtp_A LMAJ004091AAA; SGPP, st 91.2 0.69 2.4E-05 43.4 8.7 113 262-406 83-196 (254)
36 3l8d_A Methyltransferase; stru 91.1 3.1 0.00011 38.5 13.1 98 272-406 53-152 (242)
37 2o57_A Putative sarcosine dime 90.9 2.7 9.1E-05 40.6 12.9 112 262-406 68-187 (297)
38 3ocj_A Putative exported prote 90.5 7.3 0.00025 38.0 15.8 106 272-406 118-226 (305)
39 3kkz_A Uncharacterized protein 90.3 6 0.00021 37.5 14.6 113 259-405 32-148 (267)
40 3m70_A Tellurite resistance pr 90.2 4 0.00014 39.2 13.4 112 261-405 109-221 (286)
41 3vc1_A Geranyl diphosphate 2-C 90.0 6.2 0.00021 38.7 14.8 109 263-405 107-219 (312)
42 4e2x_A TCAB9; kijanose, tetron 90.0 0.87 3E-05 46.8 8.9 109 263-406 98-207 (416)
43 1kpg_A CFA synthase;, cyclopro 89.9 1.7 5.7E-05 41.9 10.3 108 264-405 56-166 (287)
44 2xvm_A Tellurite resistance pr 89.3 6.1 0.00021 35.1 13.0 111 261-404 21-133 (199)
45 3ege_A Putative methyltransfer 88.9 1.1 3.6E-05 43.0 8.1 42 263-313 25-66 (261)
46 3gu3_A Methyltransferase; alph 88.8 10 0.00034 36.6 15.1 103 271-405 21-124 (284)
47 3cgg_A SAM-dependent methyltra 88.2 5 0.00017 35.3 11.5 41 263-313 38-78 (195)
48 1nkv_A Hypothetical protein YJ 87.8 6.1 0.00021 36.9 12.5 110 262-405 26-138 (256)
49 3ofk_A Nodulation protein S; N 87.4 7.1 0.00024 35.5 12.4 111 263-406 42-153 (216)
50 3thr_A Glycine N-methyltransfe 87.2 1 3.6E-05 43.4 6.8 125 262-406 47-174 (293)
51 1ve3_A Hypothetical protein PH 87.1 7.5 0.00026 35.4 12.4 102 273-406 39-141 (227)
52 2qe6_A Uncharacterized protein 86.9 2 6.7E-05 42.2 8.7 106 274-405 79-194 (274)
53 3hem_A Cyclopropane-fatty-acyl 86.6 6.3 0.00022 38.3 12.2 115 263-405 63-181 (302)
54 1fp1_D Isoliquiritigenin 2'-O- 86.6 2.8 9.6E-05 42.5 10.0 106 262-406 198-306 (372)
55 3ccf_A Cyclopropane-fatty-acyl 86.1 4.2 0.00014 39.0 10.5 106 262-406 47-153 (279)
56 4htf_A S-adenosylmethionine-de 85.3 7.1 0.00024 37.4 11.7 109 264-406 61-172 (285)
57 1y8c_A S-adenosylmethionine-de 84.9 4.3 0.00015 37.4 9.6 103 272-406 37-141 (246)
58 2p7i_A Hypothetical protein; p 84.0 6.8 0.00023 35.9 10.5 104 264-405 33-139 (250)
59 2vdw_A Vaccinia virus capping 83.9 5.1 0.00017 39.8 10.2 109 273-405 49-167 (302)
60 3hnr_A Probable methyltransfer 83.5 1.9 6.6E-05 39.4 6.5 44 261-313 34-77 (220)
61 1wzn_A SAM-dependent methyltra 83.3 12 0.00042 34.8 12.1 103 271-406 40-144 (252)
62 3ou2_A SAM-dependent methyltra 83.1 7.8 0.00027 34.9 10.4 108 261-405 34-144 (218)
63 1zg3_A Isoflavanone 4'-O-methy 83.0 3.1 0.00011 41.8 8.3 43 263-312 182-226 (358)
64 2p35_A Trans-aconitate 2-methy 82.7 5.4 0.00018 37.3 9.3 107 263-406 24-131 (259)
65 3mq2_A 16S rRNA methyltransfer 82.2 1.8 6.2E-05 39.8 5.7 117 263-406 18-139 (218)
66 3bkw_A MLL3908 protein, S-aden 81.9 14 0.00048 33.9 11.8 109 262-405 33-142 (243)
67 3dli_A Methyltransferase; PSI- 81.6 2.1 7.3E-05 40.0 6.1 96 273-405 42-138 (240)
68 2yqz_A Hypothetical protein TT 81.4 9.4 0.00032 35.6 10.5 102 271-406 38-140 (263)
69 3g2m_A PCZA361.24; SAM-depende 81.3 2 6.8E-05 41.8 5.9 111 262-406 73-189 (299)
70 3d2l_A SAM-dependent methyltra 80.5 14 0.00046 34.0 11.2 108 264-406 27-136 (243)
71 3i9f_A Putative type 11 methyl 80.2 11 0.00037 32.9 9.9 102 263-405 8-110 (170)
72 3r0q_C Probable protein argini 80.0 11 0.00039 38.4 11.4 113 262-406 53-168 (376)
73 3giw_A Protein of unknown func 79.7 1.9 6.3E-05 43.4 5.2 139 245-405 47-198 (277)
74 3g5t_A Trans-aconitate 3-methy 79.5 15 0.0005 35.6 11.5 110 272-405 36-147 (299)
75 3fzg_A 16S rRNA methylase; met 79.4 2.4 8.3E-05 40.7 5.6 100 275-406 52-151 (200)
76 2y1w_A Histone-arginine methyl 79.3 12 0.00041 37.7 11.2 114 261-406 39-154 (348)
77 1fp2_A Isoflavone O-methyltran 78.4 7 0.00024 39.1 9.0 33 272-311 188-220 (352)
78 1vlm_A SAM-dependent methyltra 77.3 43 0.0015 30.5 13.7 21 472-492 165-185 (219)
79 2zfu_A Nucleomethylin, cerebra 76.8 7.4 0.00025 35.4 8.0 39 263-313 57-96 (215)
80 3q7e_A Protein arginine N-meth 76.8 15 0.00051 37.0 11.0 103 272-405 66-171 (349)
81 2p8j_A S-adenosylmethionine-de 76.6 19 0.00066 32.2 10.7 103 273-406 24-127 (209)
82 3bgv_A MRNA CAP guanine-N7 met 76.6 13 0.00045 36.2 10.3 114 272-406 34-154 (313)
83 3lcv_B Sisomicin-gentamicin re 76.5 5.1 0.00018 40.3 7.2 133 264-434 126-258 (281)
84 3cc8_A Putative methyltransfer 74.5 21 0.00073 32.1 10.5 106 261-405 22-128 (230)
85 2gb4_A Thiopurine S-methyltran 74.2 22 0.00076 34.2 11.0 46 259-313 51-100 (252)
86 3lcc_A Putative methyl chlorid 74.1 34 0.0012 31.4 12.0 99 274-405 68-169 (235)
87 3p9n_A Possible methyltransfer 73.8 17 0.00059 32.4 9.5 109 274-412 46-158 (189)
88 2kw5_A SLR1183 protein; struct 73.6 49 0.0017 29.4 13.3 98 275-406 32-130 (202)
89 1pjz_A Thiopurine S-methyltran 73.2 11 0.00036 34.7 8.2 33 272-313 22-54 (203)
90 1dus_A MJ0882; hypothetical pr 73.1 32 0.0011 29.9 11.0 112 261-406 41-156 (194)
91 3frh_A 16S rRNA methylase; met 72.4 6 0.00021 39.3 6.5 99 274-406 107-205 (253)
92 2yxd_A Probable cobalt-precorr 70.3 34 0.0012 29.5 10.5 102 264-405 27-129 (183)
93 3uwp_A Histone-lysine N-methyl 70.2 14 0.00047 39.5 9.0 120 262-405 163-286 (438)
94 3iv6_A Putative Zn-dependent a 70.0 5.5 0.00019 39.2 5.6 43 262-313 35-77 (261)
95 2fyt_A Protein arginine N-meth 70.0 21 0.00073 35.8 10.2 111 262-404 54-168 (340)
96 3e8s_A Putative SAM dependent 70.0 24 0.00082 31.7 9.7 46 259-313 39-84 (227)
97 3bxo_A N,N-dimethyltransferase 69.8 47 0.0016 30.2 11.8 99 272-406 40-140 (239)
98 3pfg_A N-methyltransferase; N, 68.6 25 0.00087 32.9 9.9 98 273-406 51-150 (263)
99 1g6q_1 HnRNP arginine N-methyl 66.5 44 0.0015 33.2 11.6 111 263-404 29-142 (328)
100 3u81_A Catechol O-methyltransf 65.5 16 0.00054 33.7 7.5 106 272-406 58-169 (221)
101 3b3j_A Histone-arginine methyl 65.0 16 0.00053 39.0 8.3 113 262-406 148-262 (480)
102 3eey_A Putative rRNA methylase 63.9 58 0.002 28.9 10.9 110 274-405 24-137 (197)
103 4hg2_A Methyltransferase type 63.6 35 0.0012 33.0 9.9 91 275-405 42-133 (257)
104 3hm2_A Precorrin-6Y C5,15-meth 63.3 71 0.0024 27.5 11.1 44 263-313 16-59 (178)
105 2ex4_A Adrenal gland protein A 62.7 22 0.00075 33.0 8.0 103 272-405 79-183 (241)
106 1wy7_A Hypothetical protein PH 61.3 90 0.0031 27.8 12.4 93 272-398 49-141 (207)
107 3ftd_A Dimethyladenosine trans 60.8 33 0.0011 33.0 9.1 109 263-409 22-133 (249)
108 2gs9_A Hypothetical protein TT 60.3 20 0.00068 32.3 7.1 94 272-405 36-130 (211)
109 3g07_A 7SK snRNA methylphospha 59.7 6.9 0.00024 38.2 4.1 44 263-313 35-80 (292)
110 4dcm_A Ribosomal RNA large sub 58.3 26 0.00089 35.9 8.3 119 260-406 210-333 (375)
111 3e05_A Precorrin-6Y C5,15-meth 58.3 1E+02 0.0035 27.5 11.8 44 263-313 31-74 (204)
112 3m33_A Uncharacterized protein 58.1 21 0.00073 32.9 7.0 31 274-313 50-80 (226)
113 1ri5_A MRNA capping enzyme; me 57.0 1E+02 0.0035 28.9 11.8 109 272-406 64-173 (298)
114 4azs_A Methyltransferase WBDD; 56.9 11 0.00039 40.7 5.5 84 272-379 66-150 (569)
115 2b3t_A Protein methyltransfera 56.1 77 0.0026 30.2 10.8 112 272-406 109-237 (276)
116 2g72_A Phenylethanolamine N-me 56.1 21 0.0007 34.3 6.7 44 272-329 71-114 (289)
117 3ggd_A SAM-dependent methyltra 55.2 13 0.00045 34.4 5.1 104 274-407 58-164 (245)
118 3lbf_A Protein-L-isoaspartate 54.4 1.1E+02 0.0038 27.2 11.2 105 263-406 68-173 (210)
119 3dxy_A TRNA (guanine-N(7)-)-me 54.2 31 0.001 32.3 7.4 112 272-406 34-149 (218)
120 2esr_A Methyltransferase; stru 53.9 30 0.001 30.2 7.0 105 274-411 33-142 (177)
121 1o9g_A RRNA methyltransferase; 51.1 1.5E+02 0.0053 27.4 12.2 44 265-313 44-87 (250)
122 4hc4_A Protein arginine N-meth 50.2 67 0.0023 33.2 9.8 100 275-404 86-186 (376)
123 2avn_A Ubiquinone/menaquinone 50.1 82 0.0028 29.5 9.8 33 272-313 54-86 (260)
124 3mti_A RRNA methylase; SAM-dep 49.5 43 0.0015 29.4 7.3 51 275-344 25-76 (185)
125 3njr_A Precorrin-6Y methylase; 48.6 1.6E+02 0.0054 26.8 11.3 63 263-344 46-110 (204)
126 1nv8_A HEMK protein; class I a 47.7 1.5E+02 0.005 28.8 11.5 113 274-408 125-250 (284)
127 3p2e_A 16S rRNA methylase; met 47.2 42 0.0015 31.4 7.2 35 272-313 24-58 (225)
128 3fut_A Dimethyladenosine trans 45.2 37 0.0013 33.4 6.7 100 247-372 17-121 (271)
129 1zq9_A Probable dimethyladenos 44.6 1.1E+02 0.0036 29.8 9.9 42 263-313 19-60 (285)
130 1dl5_A Protein-L-isoaspartate 44.0 1.7E+02 0.0058 28.5 11.4 109 262-406 65-174 (317)
131 2fpo_A Methylase YHHF; structu 43.7 50 0.0017 30.0 7.0 102 274-408 56-161 (202)
132 3grz_A L11 mtase, ribosomal pr 42.7 72 0.0025 28.5 7.8 69 258-344 44-115 (205)
133 2yxe_A Protein-L-isoaspartate 41.1 1.9E+02 0.0064 25.8 10.4 45 263-313 68-112 (215)
134 3dmg_A Probable ribosomal RNA 40.9 2.4E+02 0.0081 28.8 12.3 117 261-406 216-339 (381)
135 2h1r_A Dimethyladenosine trans 40.5 1.2E+02 0.004 29.7 9.5 43 262-313 32-74 (299)
136 3tfw_A Putative O-methyltransf 38.7 82 0.0028 29.6 7.8 102 273-406 64-169 (248)
137 1jsx_A Glucose-inhibited divis 38.6 72 0.0025 28.4 7.1 96 274-406 67-164 (207)
138 3g89_A Ribosomal RNA small sub 38.5 65 0.0022 30.7 7.1 56 272-344 80-136 (249)
139 3id6_C Fibrillarin-like rRNA/T 38.1 2.7E+02 0.0092 26.5 11.6 45 263-313 64-111 (232)
140 2ift_A Putative methylase HI07 36.4 1.3E+02 0.0046 27.1 8.6 105 274-410 55-166 (201)
141 2gpy_A O-methyltransferase; st 36.4 89 0.003 28.6 7.5 102 273-406 55-159 (233)
142 1zx0_A Guanidinoacetate N-meth 36.0 1.2E+02 0.0041 27.8 8.4 34 272-313 60-93 (236)
143 3tma_A Methyltransferase; thum 35.7 1.2E+02 0.004 30.2 8.7 107 271-400 202-310 (354)
144 3orh_A Guanidinoacetate N-meth 35.5 42 0.0014 31.5 5.1 103 273-404 61-167 (236)
145 1uwv_A 23S rRNA (uracil-5-)-me 35.1 2.3E+02 0.0078 29.2 11.2 106 266-406 280-388 (433)
146 1u2z_A Histone-lysine N-methyl 34.6 1.4E+02 0.0047 31.5 9.4 118 263-406 233-358 (433)
147 1yzh_A TRNA (guanine-N(7)-)-me 34.1 2.6E+02 0.0088 25.1 11.3 109 273-407 42-156 (214)
148 2pxx_A Uncharacterized protein 33.5 64 0.0022 28.6 5.8 34 272-313 42-75 (215)
149 4dzr_A Protein-(glutamine-N5) 33.4 37 0.0013 30.1 4.2 37 271-314 29-65 (215)
150 3bwc_A Spermidine synthase; SA 33.0 1.1E+02 0.0038 29.9 8.0 112 274-407 97-210 (304)
151 3lpm_A Putative methyltransfer 31.8 3.2E+02 0.011 25.4 10.9 114 272-406 49-175 (259)
152 4a69_A Histone deacetylase 3,; 31.1 17 0.00059 37.8 1.7 26 263-288 153-180 (376)
153 2vdv_E TRNA (guanine-N(7)-)-me 31.0 1.8E+02 0.0063 26.9 8.9 48 272-332 49-96 (246)
154 3b5i_A S-adenosyl-L-methionine 31.0 1.8E+02 0.006 30.0 9.3 43 272-314 52-102 (374)
155 2jjq_A Uncharacterized RNA met 30.4 4E+02 0.014 27.5 12.1 95 274-406 292-386 (425)
156 1xj5_A Spermidine synthase 1; 29.8 1.6E+02 0.0054 29.6 8.6 134 274-432 122-257 (334)
157 3tm4_A TRNA (guanine N2-)-meth 29.0 3.2E+02 0.011 27.4 10.9 110 272-405 217-329 (373)
158 1fbn_A MJ fibrillarin homologu 28.4 2.4E+02 0.0083 25.7 9.1 34 273-313 75-108 (230)
159 1iy9_A Spermidine synthase; ro 27.9 1.7E+02 0.006 28.1 8.3 135 273-435 76-214 (275)
160 2qn6_B Translation initiation 27.5 39 0.0013 28.4 3.0 43 299-343 49-91 (93)
161 3ew8_A HD8, histone deacetylas 27.3 22 0.00076 37.3 1.7 25 264-288 162-188 (388)
162 1af7_A Chemotaxis receptor met 27.2 1.1E+02 0.0036 30.1 6.6 43 272-314 105-148 (274)
163 3gru_A Dimethyladenosine trans 27.1 2E+02 0.0069 28.4 8.7 100 248-372 21-125 (295)
164 2pjd_A Ribosomal RNA small sub 27.0 1E+02 0.0036 30.5 6.6 118 260-406 184-302 (343)
165 2ksn_A Ubiquitin domain-contai 26.6 74 0.0025 28.7 4.7 36 166-202 58-93 (137)
166 1l3i_A Precorrin-6Y methyltran 26.5 2.6E+02 0.0088 23.8 8.5 37 268-313 29-65 (192)
167 3tqs_A Ribosomal RNA small sub 26.3 83 0.0028 30.4 5.6 42 263-313 20-61 (255)
168 3mb5_A SAM-dependent methyltra 26.1 2.1E+02 0.0073 26.2 8.3 45 263-313 84-128 (255)
169 1o54_A SAM-dependent O-methylt 25.9 2.4E+02 0.008 26.6 8.7 45 263-313 103-147 (277)
170 3ghf_A Septum site-determining 25.9 1.1E+02 0.0039 26.4 5.8 49 275-340 50-99 (120)
171 3uzu_A Ribosomal RNA small sub 25.7 1.2E+02 0.0042 29.6 6.8 46 263-313 33-78 (279)
172 1ixk_A Methyltransferase; open 25.0 4.1E+02 0.014 25.9 10.6 64 260-339 106-169 (315)
173 1vbf_A 231AA long hypothetical 24.7 3.6E+02 0.012 24.1 9.5 42 263-313 61-102 (231)
174 3dr5_A Putative O-methyltransf 24.5 1.5E+02 0.005 27.6 6.8 60 268-343 52-114 (221)
175 3duw_A OMT, O-methyltransferas 24.0 2.5E+02 0.0087 25.1 8.2 36 272-313 58-93 (223)
176 1ws6_A Methyltransferase; stru 23.9 87 0.003 26.6 4.8 31 274-313 43-73 (171)
177 3fpf_A Mtnas, putative unchara 23.6 5E+02 0.017 25.8 10.9 97 273-406 123-221 (298)
178 3q87_B N6 adenine specific DNA 23.5 83 0.0028 27.7 4.6 29 275-313 26-54 (170)
179 2i62_A Nicotinamide N-methyltr 23.3 2E+02 0.0068 26.3 7.5 35 271-313 55-89 (265)
180 3ntv_A MW1564 protein; rossman 23.0 1.6E+02 0.0054 27.2 6.7 102 272-406 71-175 (232)
181 2nxc_A L11 mtase, ribosomal pr 22.9 1.2E+02 0.0041 28.7 5.9 52 273-343 121-172 (254)
182 3men_A Acetylpolyamine aminohy 22.2 32 0.0011 35.7 1.7 25 264-288 197-223 (362)
183 2h00_A Methyltransferase 10 do 22.2 1.9E+02 0.0064 26.7 7.1 56 272-344 65-122 (254)
184 3tr6_A O-methyltransferase; ce 21.7 2.6E+02 0.0088 25.0 7.8 55 274-344 66-122 (225)
185 2dsk_A Chitinase; catalytic do 20.7 28 0.00097 35.3 1.0 63 274-344 112-177 (311)
186 2ipx_A RRNA 2'-O-methyltransfe 20.6 4.7E+02 0.016 23.6 9.5 35 273-313 78-112 (233)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.05 E-value=0.0017 Score=64.07 Aligned_cols=107 Identities=17% Similarity=0.234 Sum_probs=63.1
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCccc
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDV 352 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 352 (536)
.-+|+|+|.|.|. +...|+.+- ++|..+|||||.+.. .++...+++.++ ....+++|.. .+..++
T Consensus 71 ~~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~s~~------ml~~A~~~~~~~--~~~~~v~~~~--~D~~~~ 135 (261)
T 4gek_A 71 GTQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDNSPA------MIERCRRHIDAY--KAPTPVDVIE--GDIRDI 135 (261)
T ss_dssp TCEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEESCHH------HHHHHHHHHHTS--CCSSCEEEEE--SCTTTC
T ss_pred CCEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEECCHH------HHHHHHHHHHhh--ccCceEEEee--cccccc
Confidence 3479999999884 444555543 346789999998753 366665555332 1223556543 222222
Q ss_pred cccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEec
Q 009376 353 QLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVT-LVEQ 407 (536)
Q Consensus 353 ~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvt-lvEq 407 (536)
...+-.+++ +.+.|||++++ .|..+|+.| +.|+|.-+. +.|.
T Consensus 136 -----~~~~~d~v~--~~~~l~~~~~~------~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 136 -----AIENASMVV--LNFTLQFLEPS------ERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp -----CCCSEEEEE--EESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----cccccccce--eeeeeeecCch------hHhHHHHHHHHHcCCCcEEEEEec
Confidence 222223444 44578998642 356777776 679998765 4553
No 2
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.37 E-value=0.13 Score=49.29 Aligned_cols=126 Identities=21% Similarity=0.223 Sum_probs=68.4
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC--cE
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV--PF 340 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--pF 340 (536)
.|++.+.-.+.-+|+|+|.|.|.--. .|+.+- .|..++||||.+...+.....++.+.+++ +..|+ ..
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~----~l~~~~--g~~~~v~gvD~s~~~~~~~~~~~~a~~~~----~~~~~~~~v 103 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSA----VLADQV--GSSGHVTGIDIASPDYGAPLTLGQAWNHL----LAGPLGDRL 103 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHH----HHHHHH--CTTCEEEEECSSCTTCCSSSCHHHHHHHH----HTSTTGGGE
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHH----HHHHHh--CCCCEEEEEECCccccccHHHHHHHHHHH----HhcCCCCce
Confidence 45565554455689999998885433 333331 24469999998653110011355555544 33444 35
Q ss_pred EEEEeecCCccccccCccccCC--ceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCC--cEEEEEecCCCCC
Q 009376 341 EFHAANMSGYDVQLENLRVQPG--EAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSP--KVVTLVEQESNTN 412 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~g--EaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~P--kvvtlvEqEan~N 412 (536)
+|.... ++....+...++ ++|+ +...|||+++. +.+++.++.|.| ..+++.+.....+
T Consensus 104 ~~~~~d----~~~~~~~~~~~~~fD~v~--~~~~l~~~~~~--------~~~~~~~~~l~~~gG~l~~~~~~~~~~ 165 (275)
T 3bkx_A 104 TVHFNT----NLSDDLGPIADQHFDRVV--LAHSLWYFASA--------NALALLFKNMAAVCDHVDVAEWSMQPT 165 (275)
T ss_dssp EEECSC----CTTTCCGGGTTCCCSEEE--EESCGGGSSCH--------HHHHHHHHHHTTTCSEEEEEEECSSCS
T ss_pred EEEECC----hhhhccCCCCCCCEEEEE--EccchhhCCCH--------HHHHHHHHHHhCCCCEEEEEEecCCCC
Confidence 554332 111112222222 3344 45677898652 358899998887 4666766554433
No 3
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=95.84 E-value=0.1 Score=53.25 Aligned_cols=115 Identities=17% Similarity=0.153 Sum_probs=63.5
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC--cE
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV--PF 340 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--pF 340 (536)
.+++.+...+.-+|+|+|.|.|.- ..+|+.+- |.+++|++|.+. .++...++ ++..|+ .+
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~~-------~~~~a~~~----~~~~~~~~~v 231 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGKW----ATQCVQYN---KEVEVTIVDLPQ-------QLEMMRKQ----TAGLSGSERI 231 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCHH----HHHHHHHS---TTCEEEEEECHH-------HHHHHHHH----HTTCTTGGGE
T ss_pred HHHHHhcccCCCEEEEeCCCcCHH----HHHHHHhC---CCCEEEEEeCHH-------HHHHHHHH----HHhcCcccce
Confidence 345554445567999999999863 34444432 567999999632 24444333 344565 36
Q ss_pred EEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEec
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVT-LVEQ 407 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvt-lvEq 407 (536)
+|..-.....+. .+. ..-++++ +...||+++++ ....+|+.+ +.|+|.-.+ ++|.
T Consensus 232 ~~~~~d~~~~~~---~~p-~~~D~v~--~~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 232 HGHGANLLDRDV---PFP-TGFDAVW--MSQFLDCFSEE------EVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp EEEECCCCSSSC---CCC-CCCSEEE--EESCSTTSCHH------HHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEEEccccccCC---CCC-CCcCEEE--EechhhhCCHH------HHHHHHHHHHHhcCCCcEEEEEee
Confidence 665433211100 011 1223443 44578998763 234667766 668997654 5553
No 4
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=95.82 E-value=0.092 Score=49.07 Aligned_cols=112 Identities=20% Similarity=0.198 Sum_probs=62.8
Q ss_pred HHHHHhcc-cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcE
Q 009376 262 GAIAEAMK-DEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPF 340 (536)
Q Consensus 262 qAILEA~~-ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpF 340 (536)
+.+++.+. ..+.-.|+|+|.|.|.-= ..|+.+- |..++||||.+.. .++.+.+++ +..+ .+
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~----~~l~~~~---~~~~v~~vD~s~~------~~~~a~~~~----~~~~-~~ 94 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLS----AFLMEKY---PEATFTLVDMSEK------MLEIAKNRF----RGNL-KV 94 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHH----HHHHHHC---TTCEEEEEESCHH------HHHHHHHHT----CSCT-TE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHH----HHHHHhC---CCCeEEEEECCHH------HHHHHHHhh----ccCC-CE
Confidence 56666665 445689999999998533 3344332 4579999998642 233333332 2223 44
Q ss_pred EEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
+|... +..++.. . +..=+|-+...|||+++. .+..+|+.+ +.|+|.-++++
T Consensus 95 ~~~~~--d~~~~~~-----~-~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~ 146 (234)
T 3dtn_A 95 KYIEA--DYSKYDF-----E-EKYDMVVSALSIHHLEDE------DKKELYKRSYSILKESGIFIN 146 (234)
T ss_dssp EEEES--CTTTCCC-----C-SCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEeC--chhccCC-----C-CCceEEEEeCccccCCHH------HHHHHHHHHHHhcCCCcEEEE
Confidence 44332 2222211 1 333344455789999642 233566665 66899866644
No 5
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.79 E-value=0.39 Score=44.16 Aligned_cols=113 Identities=11% Similarity=0.156 Sum_probs=65.8
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-E
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-F 340 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-F 340 (536)
..|++.+.-.+.-.|+|+|.|.|.--..|.+.. +|..++||||.+.. .++.+.+++ +..|++ +
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~s~~------~~~~a~~~~----~~~~~~~~ 90 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDVQEE------MVNYAWEKV----NKLGLKNV 90 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEESCHH------HHHHHHHHH----HHHTCTTE
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEECCHH------HHHHHHHHH----HHcCCCcE
Confidence 556666665556689999999986544444433 35569999997643 244444443 334554 5
Q ss_pred EEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
+|.... ..+ +....+..=+|-+...|||+++ ...+|+.+ +.|+|.-++++
T Consensus 91 ~~~~~d--~~~-----~~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 91 EVLKSE--ENK-----IPLPDNTVDFIFMAFTFHELSE--------PLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp EEEECB--TTB-----CSSCSSCEEEEEEESCGGGCSS--------HHHHHHHHHHHEEEEEEEEE
T ss_pred EEEecc--ccc-----CCCCCCCeeEEEeehhhhhcCC--------HHHHHHHHHHHhCCCeEEEE
Confidence 554332 222 2222343444445578889854 24455554 67899766544
No 6
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=95.75 E-value=0.036 Score=54.45 Aligned_cols=115 Identities=17% Similarity=0.168 Sum_probs=63.2
Q ss_pred CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhc---CCcEEEEEeec
Q 009376 271 EDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQF---KVPFEFHAANM 347 (536)
Q Consensus 271 e~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~---gvpFeF~~V~~ 347 (536)
.+..+|+|+|.|.|.--..++..|+.+-.+ -.+.+||||.+.. .++...+++ ++.- ++.|+|.....
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD~S~~------ml~~a~~~~---~~~~~~~~v~~~~~~~~~ 120 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVEPSAE------QIAKYKELV---AKTSNLENVKFAWHKETS 120 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEECSCHH------HHHHHHHHH---HTCSSCTTEEEEEECSCH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEeCCHH------HHHHHHHHH---HhccCCCcceEEEEecch
Confidence 456799999999996444577777665211 1334599998642 244444443 2222 34455543221
Q ss_pred CCcccccc-CccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 348 SGYDVQLE-NLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 348 ~~~ev~~~-~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
+++... .....++..=+|-|.+.|||++| .+.+|+.+ +-|+|.-.+++
T Consensus 121 --~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d--------~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 121 --SEYQSRMLEKKELQKWDFIHMIQMLYYVKD--------IPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp --HHHHHHHHTTTCCCCEEEEEEESCGGGCSC--------HHHHHHHHHHTEEEEEEEEE
T ss_pred --hhhhhhhccccCCCceeEEEEeeeeeecCC--------HHHHHHHHHHHcCCCcEEEE
Confidence 111100 00012333446667789999976 24566666 55799865543
No 7
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.65 E-value=0.45 Score=45.27 Aligned_cols=109 Identities=15% Similarity=0.140 Sum_probs=61.9
Q ss_pred HHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-EEE
Q 009376 264 IAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-FEF 342 (536)
Q Consensus 264 ILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF 342 (536)
|++.+.-.+.-+|+|+|.|.|. +...|+.+- + ++||||.+.. .++...++ ++..|++ ++|
T Consensus 29 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~s~~------~l~~a~~~----~~~~~~~~v~~ 89 (260)
T 1vl5_A 29 LMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDLTED------ILKVARAF----IEGNGHQQVEY 89 (260)
T ss_dssp HHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEESCHH------HHHHHHHH----HHHTTCCSEEE
T ss_pred HHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeCCHH------HHHHHHHH----HHhcCCCceEE
Confidence 4444444455689999999885 445666653 2 9999997642 24444333 3445654 555
Q ss_pred EEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEE
Q 009376 343 HAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLV 405 (536)
Q Consensus 343 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~Pkvvtlv 405 (536)
... +..+ +...++..=+|-+.+.|||++| +...+-...+-|+|.-.+++
T Consensus 90 ~~~--d~~~-----l~~~~~~fD~V~~~~~l~~~~d-------~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 90 VQG--DAEQ-----MPFTDERFHIVTCRIAAHHFPN-------PASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp EEC--CC-C-----CCSCTTCEEEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEE
T ss_pred EEe--cHHh-----CCCCCCCEEEEEEhhhhHhcCC-------HHHHHHHHHHHcCCCCEEEE
Confidence 432 2222 2233343334456678999965 23334444577899866544
No 8
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=95.40 E-value=0.23 Score=47.59 Aligned_cols=102 Identities=23% Similarity=0.300 Sum_probs=58.8
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-EEEEEeecCCc
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-FEFHAANMSGY 350 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF~~V~~~~~ 350 (536)
+.-+|+|+|.+.|. +...|+.+. |..++||||.+.. .++.+.+ .++..|++ .+|..... .
T Consensus 37 ~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s~~------~~~~a~~----~~~~~~~~~~~~~~~d~--~ 97 (276)
T 3mgg_A 37 PGAKVLEAGCGIGA----QTVILAKNN---PDAEITSIDISPE------SLEKARE----NTEKNGIKNVKFLQANI--F 97 (276)
T ss_dssp TTCEEEETTCTTSH----HHHHHHHHC---TTSEEEEEESCHH------HHHHHHH----HHHHTTCCSEEEEECCG--G
T ss_pred CCCeEEEecCCCCH----HHHHHHHhC---CCCEEEEEECCHH------HHHHHHH----HHHHcCCCCcEEEEccc--c
Confidence 44589999999984 334444442 3469999997642 2333333 33445664 44443221 1
Q ss_pred cccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 351 DVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 351 ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
+ +...++..=+|-+...|||+++. +.+|+.+ +-|+|.-++++
T Consensus 98 ~-----~~~~~~~fD~v~~~~~l~~~~~~--------~~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 98 S-----LPFEDSSFDHIFVCFVLEHLQSP--------EEALKSLKKVLKPGGTITV 140 (276)
T ss_dssp G-----CCSCTTCEEEEEEESCGGGCSCH--------HHHHHHHHHHEEEEEEEEE
T ss_pred c-----CCCCCCCeeEEEEechhhhcCCH--------HHHHHHHHHHcCCCcEEEE
Confidence 1 22233444455566788999752 3566655 67899866544
No 9
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=95.22 E-value=0.034 Score=56.81 Aligned_cols=160 Identities=17% Similarity=0.250 Sum_probs=89.6
Q ss_pred cHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC-c
Q 009376 261 NGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV-P 339 (536)
Q Consensus 261 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-p 339 (536)
...|++++.-...-+|+|+|-+.|. ++.+|+++- |.+|+|..|.|. .++.+.+++. .-+. .
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p~~~~~~~dlp~-------v~~~a~~~~~----~~~~~r 229 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---PGCKITVFDIPE-------VVWTAKQHFS----FQEEEQ 229 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---SSCEEEEEECHH-------HHHHHHHHSC----C--CCS
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---CCceeEeccCHH-------HHHHHHHhhh----hcccCc
Confidence 4577777765555689999999996 455555553 788999888753 2333333221 1111 2
Q ss_pred EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcE-EEEEecCCCCC-CCCc
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKV-VTLVEQESNTN-TAAF 416 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkv-vtlvEqEan~N-~~~F 416 (536)
.+|.+-..- + . .+..+++ |-+...||+.+|+. ..++|+.+ +.|+|.- ++|+|.-.+.+ ..+.
T Consensus 230 v~~~~gD~~----~-~--~~~~~D~--~~~~~vlh~~~d~~------~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~ 294 (353)
T 4a6d_A 230 IDFQEGDFF----K-D--PLPEADL--YILARVLHDWADGK------CSHLLERIYHTCKPGGGILVIESLLDEDRRGPL 294 (353)
T ss_dssp EEEEESCTT----T-S--CCCCCSE--EEEESSGGGSCHHH------HHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCH
T ss_pred eeeecCccc----c-C--CCCCceE--EEeeeecccCCHHH------HHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCH
Confidence 455432211 1 1 1122343 44456789998742 23567766 6799975 55666543322 1222
Q ss_pred hHHHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHhhhhhhhccCCcccccccchhhHHHHHHhCCCccccC
Q 009376 417 YPRFLEALNYYTAMFESIDVNLARDHKERINIEQHCLARDVVNIIACEGPERIERHELLGKWRSRFTMAGFRPYPL 492 (536)
Q Consensus 417 ~~RF~EaL~yYsAlFDSLDa~lpr~~~eR~~vE~~~l~reI~NiVAcEG~eRvERhE~~~~Wr~r~~~AGF~~~pl 492 (536)
.. ++| +|.=++.+.|.+| +...|+..++.|||+.+.+
T Consensus 295 ~~----------~~~------------------------dl~ml~~~~g~er-----t~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 295 LT----------QLY------------------------SLNMLVQTEGQER-----TPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp HH----------HHH------------------------HHHHHHSSSCCCC-----CHHHHHHHHHHHTCEEEEE
T ss_pred HH----------HHH------------------------HHHHHHhCCCcCC-----CHHHHHHHHHHCCCceEEE
Confidence 11 111 1111233557665 4578999999999987654
No 10
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=95.10 E-value=0.49 Score=46.74 Aligned_cols=116 Identities=20% Similarity=0.223 Sum_probs=68.0
Q ss_pred HHHHHhccc--CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc
Q 009376 262 GAIAEAMKD--EDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP 339 (536)
Q Consensus 262 qAILEA~~g--e~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp 339 (536)
..|++.+.. .+..+|+|+|.+.|. +...|+.+. |..++|++|.+ . .++...+++. ..|++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-~------~~~~a~~~~~----~~~~~ 214 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDWA-S------VLEVAKENAR----IQGVA 214 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECH-H------HHHHHHHHHH----HHTCG
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEecH-H------HHHHHHHHHH----hcCCC
Confidence 356666655 667899999999995 334444442 45799999976 3 2555555443 33553
Q ss_pred --EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcE-EEEEecCC
Q 009376 340 --FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKV-VTLVEQES 409 (536)
Q Consensus 340 --FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkv-vtlvEqEa 409 (536)
++|...... +. .+ ++.+=+|-+...|||.+++ ....+|+.+ +.|+|.- ++++|...
T Consensus 215 ~~v~~~~~d~~--~~-----~~-~~~~D~v~~~~~l~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 215 SRYHTIAGSAF--EV-----DY-GNDYDLVLLPNFLHHFDVA------TCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp GGEEEEESCTT--TS-----CC-CSCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred cceEEEecccc--cC-----CC-CCCCcEEEEcchhccCCHH------HHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 666543221 11 11 1223344455688998653 234566655 6689977 55666443
No 11
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=94.70 E-value=0.39 Score=47.69 Aligned_cols=115 Identities=17% Similarity=0.230 Sum_probs=63.4
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEE
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFE 341 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFe 341 (536)
..|++.+.-.+ ..|+|+|-+.|. +...|+.+- |.+++|++|. .. .++...+++.+.. +.-.++
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~------~~~~a~~~~~~~~--~~~~v~ 220 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDR-EG------SLGVARDNLSSLL--AGERVS 220 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEEC-TT------CTHHHHHHTHHHH--HTTSEE
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCc-HH------HHHHHHHHHhhcC--CCCcEE
Confidence 45666664344 899999999995 334444442 4579999998 32 2555655554331 111355
Q ss_pred EEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEE-EEEecC
Q 009376 342 FHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVV-TLVEQE 408 (536)
Q Consensus 342 F~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvv-tlvEqE 408 (536)
|..-.. .+ .+. ..-++++ +...|||.+++ ....+|+.+ +.|+|.-. +++|.-
T Consensus 221 ~~~~d~--~~----~~~-~~~D~v~--~~~vl~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 221 LVGGDM--LQ----EVP-SNGDIYL--LSRIIGDLDEA------ASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp EEESCT--TT----CCC-SSCSEEE--EESCGGGCCHH------HHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EecCCC--CC----CCC-CCCCEEE--EchhccCCCHH------HHHHHHHHHHHhcCCCCEEEEEEec
Confidence 544322 11 111 1123333 45678888653 234566666 67899754 455543
No 12
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=94.52 E-value=1.2 Score=42.30 Aligned_cols=111 Identities=23% Similarity=0.273 Sum_probs=62.5
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-- 339 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 339 (536)
..|++.+.-.+.-+|+|+|.|.|..- ..|+.+.+ .++|||+.+.. .++...+ .++..|++
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~~----~~l~~~~~----~~v~gvD~s~~------~~~~a~~----~~~~~~~~~~ 112 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKPA----VRLATARD----VRVTGISISRP------QVNQANA----RATAAGLANR 112 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHHH----HHHHHHSC----CEEEEEESCHH------HHHHHHH----HHHHTTCTTT
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHH----HHHHHhcC----CEEEEEeCCHH------HHHHHHH----HHHhcCCCcc
Confidence 34455554445568999999888633 34444332 58999997642 2333333 34445664
Q ss_pred EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
++|..... .+ +...++..=+|-+...|||+++ ...+|+.+ +-|+|.-.+++
T Consensus 113 ~~~~~~d~--~~-----~~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 113 VTFSYADA--MD-----LPFEDASFDAVWALESLHHMPD--------RGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp EEEEECCT--TS-----CCSCTTCEEEEEEESCTTTSSC--------HHHHHHHHHTTEEEEEEEEE
T ss_pred eEEEECcc--cc-----CCCCCCCccEEEEechhhhCCC--------HHHHHHHHHHHcCCCeEEEE
Confidence 55544322 22 2222343444455678899865 24566665 56799865543
No 13
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=94.24 E-value=0.24 Score=49.37 Aligned_cols=112 Identities=16% Similarity=0.104 Sum_probs=63.3
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC--cE
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV--PF 340 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--pF 340 (536)
.|++.+.-.+..+|+|+|-+.| .+...|+.+- |.+++|++|.+. .++...+++ +..|+ ..
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p~~~~~~~D~~~-------~~~~a~~~~----~~~~~~~~v 221 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSG----GLLSALLTAH---EDLSGTVLDLQG-------PASAAHRRF----LDTGLSGRA 221 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---TTCEEEEEECHH-------HHHHHHHHH----HHTTCTTTE
T ss_pred HHHHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---CCCeEEEecCHH-------HHHHHHHhh----hhcCcCcCe
Confidence 3444444345679999999999 3444555442 567999998621 245554444 33454 36
Q ss_pred EEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEec
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVT-LVEQ 407 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvt-lvEq 407 (536)
+|...... .. +.. .-++ |-|...|||.+|+ ....+|+.+ +.|+|.-.+ ++|.
T Consensus 222 ~~~~~d~~-~~-----~p~-~~D~--v~~~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 222 QVVVGSFF-DP-----LPA-GAGG--YVLSAVLHDWDDL------SAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp EEEECCTT-SC-----CCC-SCSE--EEEESCGGGSCHH------HHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred EEecCCCC-CC-----CCC-CCcE--EEEehhhccCCHH------HHHHHHHHHHHhcCCCCEEEEEee
Confidence 66554332 11 111 1233 3445678998763 234666666 678997554 5553
No 14
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=94.17 E-value=0.42 Score=43.43 Aligned_cols=112 Identities=15% Similarity=0.097 Sum_probs=66.1
Q ss_pred cHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-
Q 009376 261 NGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP- 339 (536)
Q Consensus 261 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp- 339 (536)
...|++.+..... +|+|+|.|.|. +...|+.+ |..++||||.+.. .++.+.++ ++..|+.
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~s~~------~~~~a~~~----~~~~~~~~ 93 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDFSKH------MNEIALKN----IADANLND 93 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEESCHH------HHHHHHHH----HHHTTCTT
T ss_pred HHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEECCHH------HHHHHHHH----HHhccccC
Confidence 3556666655555 99999999985 44555555 4589999997642 24444443 3445553
Q ss_pred -EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 340 -FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 340 -FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
++|..... .+ +...++..=+|-+...|||+++ ...+|+.+ +.|+|.-.+++.
T Consensus 94 ~~~~~~~d~--~~-----~~~~~~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 94 RIQIVQGDV--HN-----IPIEDNYADLIVSRGSVFFWED--------VATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp TEEEEECBT--TB-----CSSCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEEcCH--HH-----CCCCcccccEEEECchHhhccC--------HHHHHHHHHHhCCCCCEEEEE
Confidence 55544322 22 2223343334445568899843 24455554 678998776553
No 15
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=94.15 E-value=0.73 Score=43.33 Aligned_cols=123 Identities=18% Similarity=0.257 Sum_probs=65.7
Q ss_pred CcchhhhhhhcHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHH
Q 009376 251 PYFKFGYMSANGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLS 330 (536)
Q Consensus 251 P~~kFa~~tANqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~ 330 (536)
.++.-+....-..|++.+.-.+.-+|+|+|.|.|.-=..|.+.+ + .++||||.+.. .++.+.+++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~----~----~~v~~vD~s~~------~~~~a~~~~~ 99 (266)
T 3ujc_A 34 NYISSGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY----G----AHTHGIDICSN------IVNMANERVS 99 (266)
T ss_dssp TCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESCHH------HHHHHHHTCC
T ss_pred CccccchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc----C----CEEEEEeCCHH------HHHHHHHHhh
Confidence 34444444455667777765666799999999885433333333 2 48999997642 1222222211
Q ss_pred HHHHhcCCcEEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 331 KLAEQFKVPFEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 331 ~fA~s~gvpFeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
.. -..+|..... .+ +....+..=+|-+...|||+++ .+ ...+|+.+ +-|+|.-.+++
T Consensus 100 ~~-----~~~~~~~~d~--~~-----~~~~~~~fD~v~~~~~l~~~~~-----~~-~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 100 GN-----NKIIFEANDI--LT-----KEFPENNFDLIYSRDAILALSL-----EN-KNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp SC-----TTEEEEECCT--TT-----CCCCTTCEEEEEEESCGGGSCH-----HH-HHHHHHHHHHHEEEEEEEEE
T ss_pred cC-----CCeEEEECcc--cc-----CCCCCCcEEEEeHHHHHHhcCh-----HH-HHHHHHHHHHHcCCCCEEEE
Confidence 11 2344433222 11 2222344444555678899853 22 34555555 67899755544
No 16
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=94.11 E-value=0.44 Score=43.35 Aligned_cols=98 Identities=16% Similarity=0.190 Sum_probs=54.9
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCccc
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDV 352 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 352 (536)
.-.|+|+|.|.|. +...|+.+ | .++||||.+.. .++...++ .-..+|... +.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~------~~~~a~~~--------~~~~~~~~~--d~--- 93 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEPATR------LVELARQT--------HPSVTFHHG--TI--- 93 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECCCHH------HHHHHHHH--------CTTSEEECC--CG---
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeCCHH------HHHHHHHh--------CCCCeEEeC--cc---
Confidence 5679999999986 45566666 2 28999997642 23333222 222333221 11
Q ss_pred cccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 353 QLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 353 ~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
..+...++..=+|-+...|||++.+ + ...+|+.+ +.|+|.-.+++.
T Consensus 94 --~~~~~~~~~fD~v~~~~~l~~~~~~-----~-~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 94 --TDLSDSPKRWAGLLAWYSLIHMGPG-----E-LPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp --GGGGGSCCCEEEEEEESSSTTCCTT-----T-HHHHHHHHHHTEEEEEEEEEE
T ss_pred --cccccCCCCeEEEEehhhHhcCCHH-----H-HHHHHHHHHHHcCCCcEEEEE
Confidence 1222333444445555789999743 2 34555554 678997666543
No 17
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=94.09 E-value=0.92 Score=45.34 Aligned_cols=115 Identities=17% Similarity=0.185 Sum_probs=67.4
Q ss_pred HHHHhcccCC-eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--
Q 009376 263 AIAEAMKDED-RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-- 339 (536)
Q Consensus 263 AILEA~~ge~-rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 339 (536)
.|++.+.-.+ ..+|+|+|-+.|. +...|+.+- |.+++|++|.+. .++...+++ +..++.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-------~~~~a~~~~----~~~~~~~~ 230 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDLPT-------TRDAARKTI----HAHDLGGR 230 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECGG-------GHHHHHHHH----HHTTCGGG
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEECHH-------HHHHHHHHH----HhcCCCCc
Confidence 6777776555 7899999999986 344444432 458999998742 255444443 344553
Q ss_pred EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEec
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVT-LVEQ 407 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvt-lvEq 407 (536)
++|...... +.. . ..++.+=+|-+...|||++++ ....+|+.+ +.|+|.-.+ ++|.
T Consensus 231 v~~~~~d~~--~~~--~--~~~~~~D~v~~~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 231 VEFFEKNLL--DAR--N--FEGGAADVVMLNDCLHYFDAR------EAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp EEEEECCTT--CGG--G--GTTCCEEEEEEESCGGGSCHH------HHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred eEEEeCCcc--cCc--c--cCCCCccEEEEecccccCCHH------HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 566543321 111 0 012324455566789998753 234667666 678997655 5553
No 18
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=94.01 E-value=1.5 Score=41.31 Aligned_cols=110 Identities=15% Similarity=0.225 Sum_probs=62.0
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-EE
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-FE 341 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-Fe 341 (536)
-+++.+.-.+.-+|+|+|.|.|. +...|+.+- + ++||||.+.. .++.+.++ ++..|++ ++
T Consensus 12 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~s~~------~~~~a~~~----~~~~~~~~v~ 72 (239)
T 1xxl_A 12 LMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDATKE------MVEVASSF----AQEKGVENVR 72 (239)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEESCHH------HHHHHHHH----HHHHTCCSEE
T ss_pred hHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEECCHH------HHHHHHHH----HHHcCCCCeE
Confidence 34555555566689999999886 344555542 2 8999997642 24444333 3334554 55
Q ss_pred EEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEE
Q 009376 342 FHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLV 405 (536)
Q Consensus 342 F~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~Pkvvtlv 405 (536)
|... +.++ +...++..=+|-|...+||+++ +...+-...+-|+|.-.+++
T Consensus 73 ~~~~--d~~~-----~~~~~~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 73 FQQG--TAES-----LPFPDDSFDIITCRYAAHHFSD-------VRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp EEEC--BTTB-----CCSCTTCEEEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEE
T ss_pred EEec--cccc-----CCCCCCcEEEEEECCchhhccC-------HHHHHHHHHHHcCCCcEEEE
Confidence 5432 2222 2233344444556678899864 23334444577899866544
No 19
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=93.64 E-value=1.1 Score=45.20 Aligned_cols=115 Identities=14% Similarity=0.121 Sum_probs=68.0
Q ss_pred cHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-
Q 009376 261 NGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP- 339 (536)
Q Consensus 261 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp- 339 (536)
...|++.+.-.+.-.|+|+|.+.|.--. .|+.+- |.+++|++|. .. .++...+++. ..|++
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~----~l~~~~---p~~~~~~~D~-~~------~~~~a~~~~~----~~~~~~ 240 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISA----AMLKHF---PELDSTILNL-PG------AIDLVNENAA----EKGVAD 240 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHH----HHHHHC---TTCEEEEEEC-GG------GHHHHHHHHH----HTTCTT
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHH----HHHHHC---CCCeEEEEec-HH------HHHHHHHHHH----hcCCCC
Confidence 4577888765667799999999987443 344332 4689999997 32 3555555443 34553
Q ss_pred -EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEecC
Q 009376 340 -FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVT-LVEQE 408 (536)
Q Consensus 340 -FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvt-lvEqE 408 (536)
++|..-.. .+. .+..+++++. ...|||++++ ....+|+.+ +.|+|.-.+ ++|.-
T Consensus 241 ~v~~~~~d~--~~~-----~~~~~D~v~~--~~vlh~~~d~------~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 241 RMRGIAVDI--YKE-----SYPEADAVLF--CRILYSANEQ------LSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp TEEEEECCT--TTS-----CCCCCSEEEE--ESCGGGSCHH------HHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred CEEEEeCcc--ccC-----CCCCCCEEEE--echhccCCHH------HHHHHHHHHHHhcCCCCEEEEEecc
Confidence 66654322 111 1223344444 4578888652 234566666 567887544 66643
No 20
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=93.59 E-value=0.37 Score=49.23 Aligned_cols=107 Identities=20% Similarity=0.252 Sum_probs=60.3
Q ss_pred HHHHHhcc-cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcE
Q 009376 262 GAIAEAMK-DEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPF 340 (536)
Q Consensus 262 qAILEA~~-ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpF 340 (536)
..|++++. -...-+|+|+|-+.|.--..|.+.. |.+++|++|.+.. ++ .|+.. -..
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------p~~~~~~~D~~~~-------~~--------~a~~~-~~v 246 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHY-------PTIKGVNFDLPHV-------IS--------EAPQF-PGV 246 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-------TTCEEEEEECHHH-------HT--------TCCCC-TTE
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHC-------CCCeEEEecCHHH-------HH--------hhhhc-CCe
Confidence 45677766 3456799999999996444444432 5679999997421 11 11111 134
Q ss_pred EEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEec
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVT-LVEQ 407 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvt-lvEq 407 (536)
+|..-... + .+ ..+++++ +...||+.+++ ....+|+.+ +.|+|.-.+ ++|.
T Consensus 247 ~~~~~D~~--~----~~--p~~D~v~--~~~vlh~~~d~------~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 247 THVGGDMF--K----EV--PSGDTIL--MKWILHDWSDQ------HCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp EEEECCTT--T----CC--CCCSEEE--EESCGGGSCHH------HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred EEEeCCcC--C----CC--CCCCEEE--ehHHhccCCHH------HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 55442221 1 11 1234444 44578999763 234677776 568997544 5553
No 21
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=93.54 E-value=0.6 Score=47.56 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=66.1
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC--c
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV--P 339 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--p 339 (536)
..|++.+.-.+..+|+|+|.+.|. +...|+.+- |.+++|++|.+. .++...+++ +..|+ .
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-------~~~~a~~~~----~~~~l~~~ 253 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDAF---PGLRGTLLERPP-------VAEEARELL----TGRGLADR 253 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECHH-------HHHHHHHHH----HHTTCTTT
T ss_pred HHHHHhCCCccCcEEEEeCCCccH----HHHHHHHHC---CCCeEEEEcCHH-------HHHHHHHhh----hhcCcCCc
Confidence 467777765667899999999996 444444442 568999998731 244454444 33454 3
Q ss_pred EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEecC
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVT-LVEQE 408 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvt-lvEqE 408 (536)
.+|...... .. +.. .-+++ -|...||+.+|+ ....+|+.+ +.|+|.-.+ ++|.-
T Consensus 254 v~~~~~d~~-~~-----~p~-~~D~v--~~~~vlh~~~d~------~~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 254 CEILPGDFF-ET-----IPD-GADVY--LIKHVLHDWDDD------DVVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp EEEEECCTT-TC-----CCS-SCSEE--EEESCGGGSCHH------HHHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred eEEeccCCC-CC-----CCC-CceEE--EhhhhhccCCHH------HHHHHHHHHHHHcCCCCEEEEEEec
Confidence 666554332 11 111 12333 344567888653 233577776 567886544 55543
No 22
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=93.49 E-value=0.93 Score=45.63 Aligned_cols=113 Identities=23% Similarity=0.287 Sum_probs=65.9
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-- 339 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 339 (536)
..|++.+.-.+..+|+|+|.|.|. +...|+.+- |.+++|++|. .. .++...+++ +..|++
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---~~~~~~~~D~-~~------~~~~a~~~~----~~~~~~~~ 233 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGG----MLAAIALRA---PHLRGTLVEL-AG------PAERARRRF----ADAGLADR 233 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-HH------HHHHHHHHH----HHTTCTTT
T ss_pred HHHHHhCCCCCCCEEEEECCCcCH----HHHHHHHHC---CCCEEEEEeC-HH------HHHHHHHHH----HhcCCCCc
Confidence 457777655566799999999994 444444442 5689999987 32 255554444 334553
Q ss_pred EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcE-EEEEec
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKV-VTLVEQ 407 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkv-vtlvEq 407 (536)
++|...... + .+ +..+=+|-+...|||++++ ....+|+.+ +.|+|.- ++++|.
T Consensus 234 v~~~~~d~~--~----~~---~~~~D~v~~~~vl~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 234 VTVAEGDFF--K----PL---PVTADVVLLSFVLLNWSDE------DALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEECCTT--S----CC---SCCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eEEEeCCCC--C----cC---CCCCCEEEEeccccCCCHH------HHHHHHHHHHHhcCCCcEEEEEec
Confidence 666543321 1 11 1223344455678988652 123566665 6689986 445664
No 23
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=93.28 E-value=0.54 Score=43.29 Aligned_cols=102 Identities=24% Similarity=0.340 Sum_probs=56.6
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC------cEEEEEee
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV------PFEFHAAN 346 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv------pFeF~~V~ 346 (536)
.-.|+|+|.|.|. +...|+.+ | .++||||.+.. .++.+ .+.++..++ .++|....
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s~~------~~~~a----~~~~~~~~~~~~~~~~~~~~~~d 91 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK--G---YSVTGIDINSE------AIRLA----ETAARSPGLNQKTGGKAEFKVEN 91 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCHH------HHHHH----HHHTTCCSCCSSSSCEEEEEECC
T ss_pred CCeEEEECCCCCH----HHHHHHhC--C---CeEEEEECCHH------HHHHH----HHHHHhcCCccccCcceEEEEec
Confidence 3479999999885 34455555 2 38999997642 12222 233444555 34444332
Q ss_pred cCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 347 MSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 347 ~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
. .+ +....+..=+|-+...|||+++. ..+..+|+.+ +.|+|.-++++
T Consensus 92 ~--~~-----~~~~~~~~D~v~~~~~l~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~ 139 (235)
T 3sm3_A 92 A--SS-----LSFHDSSFDFAVMQAFLTSVPDP-----KERSRIIKEVFRVLKPGAYLYL 139 (235)
T ss_dssp T--TS-----CCSCTTCEEEEEEESCGGGCCCH-----HHHHHHHHHHHHHEEEEEEEEE
T ss_pred c--cc-----cCCCCCceeEEEEcchhhcCCCH-----HHHHHHHHHHHHHcCCCeEEEE
Confidence 2 22 22223333344455788999762 2244666666 66899766544
No 24
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=93.15 E-value=0.45 Score=48.63 Aligned_cols=108 Identities=24% Similarity=0.240 Sum_probs=59.7
Q ss_pred HHHHHhcc-cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcE
Q 009376 262 GAIAEAMK-DEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPF 340 (536)
Q Consensus 262 qAILEA~~-ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpF 340 (536)
..|++++. -...-+|+|+|-|.|.-=. .|+.+- |.+++|++|.+.. ++ .|+.. -..
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~----~l~~~~---p~~~~~~~D~~~~-------~~--------~a~~~-~~v 248 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVAS----MIVAKY---PSINAINFDLPHV-------IQ--------DAPAF-SGV 248 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHH----HHHHHC---TTCEEEEEECHHH-------HT--------TCCCC-TTE
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHH----HHHHhC---CCCEEEEEehHHH-------HH--------hhhhc-CCC
Confidence 45666665 3446799999999986443 444332 6789999997321 11 11111 124
Q ss_pred EEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcE-EEEEecC
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKV-VTLVEQE 408 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkv-vtlvEqE 408 (536)
+|..-... + .+. .+++++. ...|||++++ ....+|+.+ +.|+|.- ++++|.-
T Consensus 249 ~~~~~d~~--~----~~p--~~D~v~~--~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 249 EHLGGDMF--D----GVP--KGDAIFI--KWICHDWSDE------HCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp EEEECCTT--T----CCC--CCSEEEE--ESCGGGBCHH------HHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEEecCCC--C----CCC--CCCEEEE--echhhcCCHH------HHHHHHHHHHHHcCCCCEEEEEEec
Confidence 55432221 1 111 2355443 4578998763 234677766 5789975 4466643
No 25
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=92.93 E-value=0.39 Score=55.40 Aligned_cols=121 Identities=17% Similarity=0.205 Sum_probs=72.0
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHH--HHhcCCc-
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKL--AEQFKVP- 339 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~f--A~s~gvp- 339 (536)
.|++.+...+.-.|+|+|.|.|. +...|+.+ ++|.-+|||||.+.. .++.+.++|... ++..|++
T Consensus 712 ~LLelL~~~~g~rVLDVGCGTG~----lai~LAr~--g~p~a~VtGVDIS~e------mLe~AReRLa~~lnAkr~gl~n 779 (950)
T 3htx_A 712 YALKHIRESSASTLVDFGCGSGS----LLDSLLDY--PTSLQTIIGVDISPK------GLARAAKMLHVKLNKEACNVKS 779 (950)
T ss_dssp HHHHHHHHSCCSEEEEETCSSSH----HHHHHTSS--CCCCCEEEEEESCHH------HHHHHHHHHHHHTTTTCSSCSE
T ss_pred HHHHHhcccCCCEEEEECCCCCH----HHHHHHHh--CCCCCeEEEEECCHH------HHHHHHHHhhhccchhhcCCCc
Confidence 34555554455689999999984 45566655 456679999998753 467777777654 2234554
Q ss_pred EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHH-HHhcCCcEEEEEecC
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLML-VKRLSPKVVTLVEQE 408 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~-VksL~PkvvtlvEqE 408 (536)
.+|. ..+..++. ...+..=+|-|...|||+++. .+..+|+. .+-|+|.++++....
T Consensus 780 Vefi--qGDa~dLp-----~~d~sFDlVV~~eVLeHL~dp------~l~~~L~eI~RvLKPG~LIISTPN 836 (950)
T 3htx_A 780 ATLY--DGSILEFD-----SRLHDVDIGTCLEVIEHMEED------QACEFGEKVLSLFHPKLLIVSTPN 836 (950)
T ss_dssp EEEE--ESCTTSCC-----TTSCSCCEEEEESCGGGSCHH------HHHHHHHHHHHTTCCSEEEEEECB
T ss_pred eEEE--ECchHhCC-----cccCCeeEEEEeCchhhCChH------HHHHHHHHHHHHcCCCEEEEEecC
Confidence 3443 33333322 222323334445688999752 23456655 588999966666543
No 26
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=92.88 E-value=1.8 Score=43.28 Aligned_cols=114 Identities=24% Similarity=0.296 Sum_probs=65.7
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC--c
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV--P 339 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--p 339 (536)
..|++.+.-.+..+|+|+|.|.|.-- ..|+.+- |.+++|++|.+. .++...+++ +..|+ .
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~----~~l~~~~---~~~~~~~~D~~~-------~~~~a~~~~----~~~~~~~~ 234 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFA----AAIARRA---PHVSATVLEMAG-------TVDTARSYL----KDEGLSDR 234 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHH----HHHHHHC---TTCEEEEEECTT-------HHHHHHHHH----HHTTCTTT
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHH----HHHHHhC---CCCEEEEecCHH-------HHHHHHHHH----HhcCCCCc
Confidence 56677776556679999999999543 3444332 568999998621 355555444 33455 3
Q ss_pred EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEE-EEEecC
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVV-TLVEQE 408 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvv-tlvEqE 408 (536)
++|...... + .+ ++.+=+|-+...|||++++ ....+|+.+ +.|+|.-. +++|..
T Consensus 235 v~~~~~d~~--~----~~---~~~~D~v~~~~vl~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 235 VDVVEGDFF--E----PL---PRKADAIILSFVLLNWPDH------DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEECCTT--S----CC---SSCEEEEEEESCGGGSCHH------HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred eEEEeCCCC--C----CC---CCCccEEEEcccccCCCHH------HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 666543221 1 11 1223344455678988652 123566665 56899764 455543
No 27
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=92.86 E-value=0.98 Score=41.60 Aligned_cols=117 Identities=17% Similarity=0.249 Sum_probs=65.5
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC---
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV--- 338 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--- 338 (536)
+.|++.+...+.-.|+|+|.+.|. +...|+.+. |..++||||.+.. .++.+.+++ +..++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~------~~~~a~~~~----~~~~~~~~ 81 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDVSYS------VLERAKDRL----KIDRLPEM 81 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEESCHH------HHHHHHHHH----TGGGSCHH
T ss_pred HHHHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEECCHH------HHHHHHHHH----Hhhccccc
Confidence 345555554555689999999986 455666552 4579999998643 244444443 22233
Q ss_pred ---cEEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEecC
Q 009376 339 ---PFEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVEQE 408 (536)
Q Consensus 339 ---pFeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvEqE 408 (536)
.++|..... ... ....+..=+|-|...|||+++. .+..+|+.+ +.|+|.-++++...
T Consensus 82 ~~~~v~~~~~d~--~~~-----~~~~~~fD~V~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 82 QRKRISLFQSSL--VYR-----DKRFSGYDAATVIEVIEHLDEN------RLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp HHTTEEEEECCS--SSC-----CGGGTTCSEEEEESCGGGCCHH------HHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cCcceEEEeCcc--ccc-----ccccCCCCEEEEHHHHHhCCHH------HHHHHHHHHHHhhCCCEEEEEccc
Confidence 345544322 111 1111211123356688999642 234666665 67899987766544
No 28
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=92.41 E-value=1.2 Score=45.55 Aligned_cols=112 Identities=15% Similarity=0.136 Sum_probs=63.8
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhc-C----CcEEEEEee
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQF-K----VPFEFHAAN 346 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~-g----vpFeF~~V~ 346 (536)
+.-.|+|+|.|.|.-=..|.+.+ .|..++||||.+.. .++.+.+++.+.+..+ | -..+|....
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~------~~~~~v~gvD~s~~------~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d 150 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV------GEHGKVIGVDMLDN------QLEVARKYVEYHAEKFFGSPSRSNVRFLKGF 150 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH------TTTCEEEEEECCHH------HHHHHHHTHHHHHHHHHSSTTCCCEEEEESC
T ss_pred CCCEEEEecCccCHHHHHHHHHh------CCCCEEEEEECCHH------HHHHHHHHHHHhhhhcccccCCCceEEEEcc
Confidence 44589999999985433333333 13359999998653 4777777777666554 4 345554432
Q ss_pred cCCcccc-ccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 347 MSGYDVQ-LENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 347 ~~~~ev~-~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
. .++. .......++..=+|-+...|||++| ...+|+.+ +-|+|.-.+++
T Consensus 151 ~--~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d--------~~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 151 I--ENLATAEPEGVPDSSVDIVISNCVCNLSTN--------KLALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp T--TCGGGCBSCCCCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred H--HHhhhcccCCCCCCCEEEEEEccchhcCCC--------HHHHHHHHHHHcCCCCEEEE
Confidence 2 2210 0011233343334445567888865 24555555 67899866544
No 29
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=92.12 E-value=1.5 Score=40.27 Aligned_cols=114 Identities=21% Similarity=0.361 Sum_probs=63.6
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc---
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--- 339 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--- 339 (536)
.|++.+...+.-.|+|+|.|.|. +...|+.+. |..++||||.+.. .++.+.+++ +..+++
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~------~~~~a~~~~----~~~~~~~~~ 82 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDVSYR------SLEIAQERL----DRLRLPRNQ 82 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEESCHH------HHHHHHHHH----TTCCCCHHH
T ss_pred HHHHHHHhcCCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEECCHH------HHHHHHHHH----HHhcCCccc
Confidence 34444444445589999999986 445566552 3469999998642 244444433 334443
Q ss_pred ---EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 340 ---FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 340 ---FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
++|...... .... ....=++|+ |...|||+++. ....+|+.+ +-|+|.-++++.
T Consensus 83 ~~~v~~~~~d~~--~~~~---~~~~fD~v~--~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 83 WERLQLIQGALT--YQDK---RFHGYDAAT--VIEVIEHLDLS------RLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp HTTEEEEECCTT--SCCG---GGCSCSEEE--EESCGGGCCHH------HHHHHHHHHHTTTCCSEEEEEE
T ss_pred CcceEEEeCCcc--cccc---cCCCcCEEe--eHHHHHcCCHH------HHHHHHHHHHHHcCCCEEEEEc
Confidence 555443321 1111 111113333 55678998542 245677666 568999877664
No 30
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=91.74 E-value=3.5 Score=38.61 Aligned_cols=125 Identities=18% Similarity=0.083 Sum_probs=67.7
Q ss_pred hcCCcchhhhhhhcHHHHHhccc-CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHH
Q 009376 248 EVCPYFKFGYMSANGAIAEAMKD-EDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVG 326 (536)
Q Consensus 248 e~~P~~kFa~~tANqAILEA~~g-e~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG 326 (536)
+..+-..-++......+++.+.+ .+.-+|+|+|.|.|..-. .|+.+. |. ++||||.+.. .++.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~----~l~~~~---~~-~v~~vD~s~~------~~~~a~ 86 (257)
T 3f4k_A 21 KLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGTGGQTL----FLADYV---KG-QITGIDLFPD------FIEIFN 86 (257)
T ss_dssp TTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHH----HHHHHC---CS-EEEEEESCHH------HHHHHH
T ss_pred cCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHH----HHHHhC---CC-eEEEEECCHH------HHHHHH
Confidence 33333333333444445555533 234589999999886433 344432 22 9999997642 233333
Q ss_pred HHHHHHHHhcCCc--EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEE
Q 009376 327 KRLSKLAEQFKVP--FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVT 403 (536)
Q Consensus 327 ~rL~~fA~s~gvp--FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvt 403 (536)
+.++..|++ .+|..... .++ ...++..=+|-+...|||+ + .+.+|+.+ +-|+|.-++
T Consensus 87 ----~~~~~~~~~~~~~~~~~d~--~~~-----~~~~~~fD~v~~~~~l~~~-~--------~~~~l~~~~~~L~pgG~l 146 (257)
T 3f4k_A 87 ----ENAVKANCADRVKGITGSM--DNL-----PFQNEELDLIWSEGAIYNI-G--------FERGMNEWSKYLKKGGFI 146 (257)
T ss_dssp ----HHHHHTTCTTTEEEEECCT--TSC-----SSCTTCEEEEEEESCSCCC-C--------HHHHHHHHHTTEEEEEEE
T ss_pred ----HHHHHcCCCCceEEEECCh--hhC-----CCCCCCEEEEEecChHhhc-C--------HHHHHHHHHHHcCCCcEE
Confidence 344556776 66654332 222 2223434444455678888 2 23566655 568997666
Q ss_pred EEe
Q 009376 404 LVE 406 (536)
Q Consensus 404 lvE 406 (536)
++.
T Consensus 147 ~~~ 149 (257)
T 3f4k_A 147 AVS 149 (257)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 31
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=91.68 E-value=6.9 Score=38.21 Aligned_cols=109 Identities=12% Similarity=0.123 Sum_probs=58.5
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--E
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--F 340 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--F 340 (536)
.|++.+.-.+.-+|+|+|.|.|.- ...|+.+.+ .++||||.+.. .++...++ ++..|++ .
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~~----~~~la~~~~----~~v~gvD~s~~------~~~~a~~~----~~~~~~~~~v 142 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGTT----MRRAVERFD----VNVIGLTLSKN------QHARCEQV----LASIDTNRSR 142 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSHH----HHHHHHHHC----CEEEEEESCHH------HHHHHHHH----HHTSCCSSCE
T ss_pred HHHHhcCCCCcCEEEEEcccchHH----HHHHHHHCC----CEEEEEECCHH------HHHHHHHH----HHhcCCCCce
Confidence 455555444556899999988753 334444322 28999997642 23333333 3445654 4
Q ss_pred EEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
+|... +..++. ..=++|+ +...|||++++ + ...+|+.+ +-|+|.-.+++
T Consensus 143 ~~~~~--d~~~~~------~~fD~v~--~~~~l~~~~~~-----~-~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 143 QVLLQ--GWEDFA------EPVDRIV--SIEAFEHFGHE-----N-YDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp EEEES--CGGGCC------CCCSEEE--EESCGGGTCGG-----G-HHHHHHHHHHHSCTTCEEEE
T ss_pred EEEEC--ChHHCC------CCcCEEE--EeChHHhcCHH-----H-HHHHHHHHHHhcCCCcEEEE
Confidence 55432 222221 1113333 34578898642 2 34455554 67899855544
No 32
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=91.61 E-value=0.98 Score=42.57 Aligned_cols=111 Identities=16% Similarity=0.184 Sum_probs=64.0
Q ss_pred cHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcE
Q 009376 261 NGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPF 340 (536)
Q Consensus 261 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpF 340 (536)
-..|++.+...+.-.|+|+|.|.|. +...|+.+ |+. ++||||.+.. .++.+.+++. +-..
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--~~~--~v~~vD~s~~------~~~~a~~~~~------~~~~ 92 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEH--GAK--KVLGIDLSER------MLTEAKRKTT------SPVV 92 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHT--TCS--EEEEEESCHH------HHHHHHHHCC------CTTE
T ss_pred HHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHc--CCC--EEEEEECCHH------HHHHHHHhhc------cCCe
Confidence 3456666665567789999999984 44555555 222 8999997642 2333333221 2344
Q ss_pred EEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
+|..... . .+....+..=+|-|...|||+.+ ...+|+.+ +-|+|.-++++.
T Consensus 93 ~~~~~d~--~-----~~~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 93 CYEQKAI--E-----DIAIEPDAYNVVLSSLALHYIAS--------FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEECCG--G-----GCCCCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcch--h-----hCCCCCCCeEEEEEchhhhhhhh--------HHHHHHHHHHHcCCCcEEEEE
Confidence 5544322 1 12222344444555568999854 34566665 568998777664
No 33
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=91.58 E-value=0.89 Score=45.76 Aligned_cols=110 Identities=13% Similarity=0.130 Sum_probs=61.3
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC--c
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV--P 339 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--p 339 (536)
..|++.+.-.+.-+|+|+|.|.|.-=. .|+.+- |.+++|++|.+.. +. .+.++..++ .
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~----~l~~~~---p~~~~~~~D~~~~-------~~------~~~~~~~~~~~~ 233 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLL----TVLREH---PGLQGVLLDRAEV-------VA------RHRLDAPDVAGR 233 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHH----HHHHHC---TTEEEEEEECHHH-------HT------TCCCCCGGGTTS
T ss_pred HHHHHhCCccCCceEEEECCccCHHHH----HHHHHC---CCCEEEEecCHHH-------hh------cccccccCCCCC
Confidence 467777765667899999999986433 444332 5789999997421 11 011111222 2
Q ss_pred EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEec
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVT-LVEQ 407 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvt-lvEq 407 (536)
.+|..-... .. +. .-+++ -+...|||++|+ ....+|+.+ +.|+|.-.+ ++|.
T Consensus 234 v~~~~~d~~-~~-----~p--~~D~v--~~~~vlh~~~d~------~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 234 WKVVEGDFL-RE-----VP--HADVH--VLKRILHNWGDE------DSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp EEEEECCTT-TC-----CC--CCSEE--EEESCGGGSCHH------HHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred eEEEecCCC-CC-----CC--CCcEE--EEehhccCCCHH------HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 556543321 11 11 22333 344578998763 224667766 678997544 5554
No 34
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=91.33 E-value=0.85 Score=41.75 Aligned_cols=96 Identities=24% Similarity=0.266 Sum_probs=54.8
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCccc
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDV 352 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 352 (536)
.-.|+|+|.|.|. +...|+.+ | .++||||.+.. .++.+.+++ ++.|.- .+.
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~~------~~~~a~~~~-------~~~~~~----~d~--- 94 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA--G---FDVDATDGSPE------LAAEASRRL-------GRPVRT----MLF--- 94 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT--T---CEEEEEESCHH------HHHHHHHHH-------TSCCEE----CCG---
T ss_pred CCcEEEECCCCCH----HHHHHHHc--C---CeEEEECCCHH------HHHHHHHhc-------CCceEE----eee---
Confidence 4579999999886 44556655 2 38999997642 244444433 444321 111
Q ss_pred cccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 353 QLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 353 ~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
..+. .++..=+|-|...|||++++ + ...+|+.+ +.|+|.-++++.
T Consensus 95 --~~~~-~~~~fD~v~~~~~l~~~~~~-----~-~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 95 --HQLD-AIDAYDAVWAHACLLHVPRD-----E-LADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp --GGCC-CCSCEEEEEECSCGGGSCHH-----H-HHHHHHHHHHHEEEEEEEEEE
T ss_pred --ccCC-CCCcEEEEEecCchhhcCHH-----H-HHHHHHHHHHhcCCCcEEEEE
Confidence 1122 22333344466788998632 2 34555555 678998777664
No 35
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=91.20 E-value=0.69 Score=43.39 Aligned_cols=113 Identities=12% Similarity=0.090 Sum_probs=60.9
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEE
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFE 341 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFe 341 (536)
..+++.+...+.-+|+|+|.|.|.--..|.+.. ..++||||.+.. .++.+.+++.+ . -..+
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--------~~~v~~vD~s~~------~~~~a~~~~~~----~-~~~~ 143 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRITKNLLTKL--------YATTDLLEPVKH------MLEEAKRELAG----M-PVGK 143 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH--------CSEEEEEESCHH------HHHHHHHHTTT----S-SEEE
T ss_pred HHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh--------cCEEEEEeCCHH------HHHHHHHHhcc----C-CceE
Confidence 456666655566789999999986333333332 248999997642 24433333221 1 2344
Q ss_pred EEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHH-HHhcCCcEEEEEe
Q 009376 342 FHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLML-VKRLSPKVVTLVE 406 (536)
Q Consensus 342 F~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~-VksL~PkvvtlvE 406 (536)
|... +..+ +...++..=+|-|...|||++++ + ...+|+. .+.|+|.-++++.
T Consensus 144 ~~~~--d~~~-----~~~~~~~fD~v~~~~~l~~~~~~-----~-~~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 144 FILA--SMET-----ATLPPNTYDLIVIQWTAIYLTDA-----D-FVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp EEES--CGGG-----CCCCSSCEEEEEEESCGGGSCHH-----H-HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEc--cHHH-----CCCCCCCeEEEEEcchhhhCCHH-----H-HHHHHHHHHHhcCCCeEEEEE
Confidence 4332 2221 22223333344455689999642 2 3445554 4778998766554
No 36
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=91.12 E-value=3.1 Score=38.50 Aligned_cols=98 Identities=13% Similarity=0.129 Sum_probs=55.2
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhc--CCcEEEEEeecCC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQF--KVPFEFHAANMSG 349 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~--gvpFeF~~V~~~~ 349 (536)
+.-.|+|+|.|.|. +...|+.+ | .++||||.+.. .++ .|+.. +..++|.....
T Consensus 53 ~~~~vLDiG~G~G~----~~~~l~~~--~---~~v~~vD~s~~------~~~--------~a~~~~~~~~~~~~~~d~-- 107 (242)
T 3l8d_A 53 KEAEVLDVGCGDGY----GTYKLSRT--G---YKAVGVDISEV------MIQ--------KGKERGEGPDLSFIKGDL-- 107 (242)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCHH------HHH--------HHHTTTCBTTEEEEECBT--
T ss_pred CCCeEEEEcCCCCH----HHHHHHHc--C---CeEEEEECCHH------HHH--------HHHhhcccCCceEEEcch--
Confidence 34589999999885 44556655 2 38999997642 122 23332 23445543322
Q ss_pred ccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 009376 350 YDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVE 406 (536)
Q Consensus 350 ~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~PkvvtlvE 406 (536)
.+ +....+..=+|-+...|||+++ +...+-...+.|+|.-++++.
T Consensus 108 ~~-----~~~~~~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 108 SS-----LPFENEQFEAIMAINSLEWTEE-------PLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp TB-----CSSCTTCEEEEEEESCTTSSSC-------HHHHHHHHHHHEEEEEEEEEE
T ss_pred hc-----CCCCCCCccEEEEcChHhhccC-------HHHHHHHHHHHhCCCeEEEEE
Confidence 11 2223344445556678999854 233344445778997766554
No 37
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=90.95 E-value=2.7 Score=40.63 Aligned_cols=112 Identities=14% Similarity=0.145 Sum_probs=63.8
Q ss_pred HHHHHhc----ccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcC
Q 009376 262 GAIAEAM----KDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFK 337 (536)
Q Consensus 262 qAILEA~----~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g 337 (536)
..|++.+ .-...-+|+|+|.|.|..-..|.+.+ + .++||||.+.. .++...+++ +..|
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~s~~------~~~~a~~~~----~~~~ 129 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNIAPV------QNKRNEEYN----NQAG 129 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESCHH------HHHHHHHHH----HHHT
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeCCHH------HHHHHHHHH----HhcC
Confidence 3455555 33445689999999887555554443 2 38999997642 244444433 3345
Q ss_pred Cc--EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEe
Q 009376 338 VP--FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVT-LVE 406 (536)
Q Consensus 338 vp--FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvt-lvE 406 (536)
++ ++|... +..+ +...++..=+|-+...|||+++ ...+|+.+ +-|+|.-.+ +++
T Consensus 130 ~~~~~~~~~~--d~~~-----~~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 130 LADNITVKYG--SFLE-----IPCEDNSYDFIWSQDAFLHSPD--------KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp CTTTEEEEEC--CTTS-----CSSCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcceEEEEc--Cccc-----CCCCCCCEeEEEecchhhhcCC--------HHHHHHHHHHHcCCCeEEEEEE
Confidence 53 555432 2222 2233344445556678999975 24555554 678997655 444
No 38
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=90.49 E-value=7.3 Score=38.00 Aligned_cols=106 Identities=15% Similarity=0.158 Sum_probs=60.2
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--EEEEEeecCC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--FEFHAANMSG 349 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~ 349 (536)
+.-+|+|+|.|.|. +...||.+ ..|..++||||.+.. .++.+. +.++..|++ .+|.....
T Consensus 118 ~~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~~------~~~~a~----~~~~~~~~~~~v~~~~~d~-- 179 (305)
T 3ocj_A 118 PGCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDYDPE------ALDGAT----RLAAGHALAGQITLHRQDA-- 179 (305)
T ss_dssp TTCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEESCHH------HHHHHH----HHHTTSTTGGGEEEEECCG--
T ss_pred CCCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEECCHH------HHHHHH----HHHHhcCCCCceEEEECch--
Confidence 34579999999884 33344322 235679999997642 243333 334556665 66654322
Q ss_pred ccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 350 YDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 350 ~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
.++. .. +..=+|-+...+||+++. .....+|+.+ +.|+|.-++++.
T Consensus 180 ~~~~-----~~-~~fD~v~~~~~~~~~~~~-----~~~~~~l~~~~~~LkpgG~l~i~ 226 (305)
T 3ocj_A 180 WKLD-----TR-EGYDLLTSNGLNIYEPDD-----ARVTELYRRFWQALKPGGALVTS 226 (305)
T ss_dssp GGCC-----CC-SCEEEEECCSSGGGCCCH-----HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCC-----cc-CCeEEEEECChhhhcCCH-----HHHHHHHHHHHHhcCCCeEEEEE
Confidence 2211 11 333344455678998763 1223466665 678998887764
No 39
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=90.25 E-value=6 Score=37.53 Aligned_cols=113 Identities=17% Similarity=0.060 Sum_probs=65.1
Q ss_pred hhcHHHHHhcc-cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcC
Q 009376 259 SANGAIAEAMK-DEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFK 337 (536)
Q Consensus 259 tANqAILEA~~-ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g 337 (536)
..-..+++.+. -.+.-+|+|+|.|.|. +...|+.+ |..++||||.+.. .++.+. +.++..|
T Consensus 32 ~~~~~~l~~l~~~~~~~~vLDiGcG~G~----~~~~la~~----~~~~v~gvD~s~~------~~~~a~----~~~~~~~ 93 (267)
T 3kkz_A 32 EVTLKALSFIDNLTEKSLIADIGCGTGG----QTMVLAGH----VTGQVTGLDFLSG------FIDIFN----RNARQSG 93 (267)
T ss_dssp HHHHHHHTTCCCCCTTCEEEEETCTTCH----HHHHHHTT----CSSEEEEEESCHH------HHHHHH----HHHHHTT
T ss_pred HHHHHHHHhcccCCCCCEEEEeCCCCCH----HHHHHHhc----cCCEEEEEeCCHH------HHHHHH----HHHHHcC
Confidence 33344555554 2345689999998874 45566666 3469999997642 244333 3345567
Q ss_pred Cc--EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 338 VP--FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 338 vp--FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
++ .+|..... .++ ....+..=+|-|...+||+ + .+.+|+.+ +-|+|.-++++
T Consensus 94 ~~~~v~~~~~d~--~~~-----~~~~~~fD~i~~~~~~~~~-~--------~~~~l~~~~~~LkpgG~l~~ 148 (267)
T 3kkz_A 94 LQNRVTGIVGSM--DDL-----PFRNEELDLIWSEGAIYNI-G--------FERGLNEWRKYLKKGGYLAV 148 (267)
T ss_dssp CTTTEEEEECCT--TSC-----CCCTTCEEEEEESSCGGGT-C--------HHHHHHHHGGGEEEEEEEEE
T ss_pred CCcCcEEEEcCh--hhC-----CCCCCCEEEEEEcCCceec-C--------HHHHHHHHHHHcCCCCEEEE
Confidence 75 66654332 222 2223444455566678888 3 24556555 67899866544
No 40
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=90.22 E-value=4 Score=39.23 Aligned_cols=112 Identities=12% Similarity=0.156 Sum_probs=66.3
Q ss_pred cHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcE
Q 009376 261 NGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPF 340 (536)
Q Consensus 261 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpF 340 (536)
...+++.+...+.-+|+|+|.|.|. +...|+.+ | .++||||.+.. .++.+. +.++..|+..
T Consensus 109 ~~~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~s~~------~~~~a~----~~~~~~~~~~ 169 (286)
T 3m70_A 109 HGDVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDHNEN------SIAFLN----ETKEKENLNI 169 (286)
T ss_dssp CHHHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEESCHH------HHHHHH----HHHHHTTCCE
T ss_pred HHHHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEECCHH------HHHHHH----HHHHHcCCce
Confidence 4566677765567789999999986 44456665 2 38999997642 244333 3345567766
Q ss_pred EEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
+|..... .++. . ++..=+|-+...|||++++ .+..+|+.+ +.|+|.-++++
T Consensus 170 ~~~~~d~--~~~~-----~-~~~fD~i~~~~~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 170 STALYDI--NAAN-----I-QENYDFIVSTVVFMFLNRE------RVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp EEEECCG--GGCC-----C-CSCEEEEEECSSGGGSCGG------GHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEEecc--cccc-----c-cCCccEEEEccchhhCCHH------HHHHHHHHHHHhcCCCcEEEE
Confidence 6654332 2111 1 2333233344578888642 245666665 67899876444
No 41
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=90.02 E-value=6.2 Score=38.65 Aligned_cols=109 Identities=17% Similarity=0.153 Sum_probs=61.1
Q ss_pred HHHHhcc-cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--
Q 009376 263 AIAEAMK-DEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-- 339 (536)
Q Consensus 263 AILEA~~-ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 339 (536)
.|++.+. -...-+|+|+|.|.|.- ...|+.+.+ .++||||.+.. .++.+. +.++..|++
T Consensus 107 ~l~~~l~~~~~~~~vLDiGcG~G~~----~~~la~~~~----~~v~gvD~s~~------~~~~a~----~~~~~~~~~~~ 168 (312)
T 3vc1_A 107 FLMDHLGQAGPDDTLVDAGCGRGGS----MVMAHRRFG----SRVEGVTLSAA------QADFGN----RRARELRIDDH 168 (312)
T ss_dssp HHHTTSCCCCTTCEEEEESCTTSHH----HHHHHHHHC----CEEEEEESCHH------HHHHHH----HHHHHTTCTTT
T ss_pred HHHHHhccCCCCCEEEEecCCCCHH----HHHHHHHcC----CEEEEEeCCHH------HHHHHH----HHHHHcCCCCc
Confidence 4666665 34456899999988843 334444422 58999997642 243333 344556765
Q ss_pred EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
.+|..... .++ ....+..=+|-+...|||+ + ...+|+.+ +-|+|.-.+++
T Consensus 169 v~~~~~d~--~~~-----~~~~~~fD~V~~~~~l~~~-~--------~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 169 VRSRVCNM--LDT-----PFDKGAVTASWNNESTMYV-D--------LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp EEEEECCT--TSC-----CCCTTCEEEEEEESCGGGS-C--------HHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEECCh--hcC-----CCCCCCEeEEEECCchhhC-C--------HHHHHHHHHHHcCCCcEEEE
Confidence 66654332 221 2223333344455678888 3 23455554 67899765543
No 42
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=89.98 E-value=0.87 Score=46.78 Aligned_cols=109 Identities=18% Similarity=0.239 Sum_probs=64.2
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEE
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEF 342 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF 342 (536)
.|++.+.-.+.-.|+|+|.|.|. ++..|+.+ | .++||||.+. ...+.|+..|++..-
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s~--------------~~~~~a~~~~~~~~~ 154 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPSS--------------GVAAKAREKGIRVRT 154 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCCH--------------HHHHHHHTTTCCEEC
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCCH--------------HHHHHHHHcCCCcce
Confidence 34455544456689999999997 55566655 2 2999999864 223456666666432
Q ss_pred EEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 343 HAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 343 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
..+. ....+.+....+.+=+|-+...|||++| ...+|+.+ +-|+|.-+++++
T Consensus 155 ~~~~----~~~~~~l~~~~~~fD~I~~~~vl~h~~d--------~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 155 DFFE----KATADDVRRTEGPANVIYAANTLCHIPY--------VQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp SCCS----HHHHHHHHHHHCCEEEEEEESCGGGCTT--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred eeec----hhhHhhcccCCCCEEEEEECChHHhcCC--------HHHHHHHHHHHcCCCeEEEEE
Confidence 1110 0111222222344445556678999964 34566665 678998777665
No 43
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=89.88 E-value=1.7 Score=41.88 Aligned_cols=108 Identities=13% Similarity=0.119 Sum_probs=57.4
Q ss_pred HHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--EE
Q 009376 264 IAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--FE 341 (536)
Q Consensus 264 ILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--Fe 341 (536)
|++.+.-.+.-+|+|+|.|.|. +...|+.+.+ .++|||+.+.. .++.+.++ ++..|+. .+
T Consensus 56 ~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvd~s~~------~~~~a~~~----~~~~~~~~~~~ 117 (287)
T 1kpg_A 56 ALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYD----VNVVGLTLSKN------QANHVQQL----VANSENLRSKR 117 (287)
T ss_dssp HHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESCHH------HHHHHHHH----HHTCCCCSCEE
T ss_pred HHHHcCCCCcCEEEEECCcccH----HHHHHHHHcC----CEEEEEECCHH------HHHHHHHH----HHhcCCCCCeE
Confidence 4444444455689999988876 3444543332 29999997642 24433333 3444543 44
Q ss_pred EEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHH-HHhcCCcEEEEE
Q 009376 342 FHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLML-VKRLSPKVVTLV 405 (536)
Q Consensus 342 F~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~-VksL~Pkvvtlv 405 (536)
|.. .+..++. ..=++|+ +...|||++++ + ...+|+. .+-|+|.-.+++
T Consensus 118 ~~~--~d~~~~~------~~fD~v~--~~~~l~~~~~~-----~-~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 118 VLL--AGWEQFD------EPVDRIV--SIGAFEHFGHE-----R-YDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp EEE--SCGGGCC------CCCSEEE--EESCGGGTCTT-----T-HHHHHHHHHHHSCTTCEEEE
T ss_pred EEE--CChhhCC------CCeeEEE--EeCchhhcChH-----H-HHHHHHHHHHhcCCCCEEEE
Confidence 433 2222221 1112333 34578999652 2 2345555 467899755543
No 44
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=89.30 E-value=6.1 Score=35.13 Aligned_cols=111 Identities=14% Similarity=0.143 Sum_probs=62.0
Q ss_pred cHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC-c
Q 009376 261 NGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV-P 339 (536)
Q Consensus 261 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-p 339 (536)
++.|++.+...+.-+|+|+|.|.|. +...|+.+ + .++||||.+.. .++...+++ +..++ .
T Consensus 21 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~------~~~~a~~~~----~~~~~~~ 81 (199)
T 2xvm_A 21 HSEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G----YDVDAWDKNAM------SIANVERIK----SIENLDN 81 (199)
T ss_dssp CHHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHH------HHHHHHHHH----HHHTCTT
T ss_pred cHHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C----CeEEEEECCHH------HHHHHHHHH----HhCCCCC
Confidence 4567777765555599999999886 33455555 2 38999997642 244444333 33455 4
Q ss_pred EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEE
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTL 404 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtl 404 (536)
++|..... .++ .. ++..=+|-+...|||++++ + +..+|+.+ +.|+|.-.++
T Consensus 82 ~~~~~~d~--~~~-----~~-~~~~D~v~~~~~l~~~~~~-----~-~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 82 LHTRVVDL--NNL-----TF-DRQYDFILSTVVLMFLEAK-----T-IPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp EEEEECCG--GGC-----CC-CCCEEEEEEESCGGGSCGG-----G-HHHHHHHHHHTEEEEEEEE
T ss_pred cEEEEcch--hhC-----CC-CCCceEEEEcchhhhCCHH-----H-HHHHHHHHHHhcCCCeEEE
Confidence 55543322 111 11 2322233344578888632 2 34566555 6789986643
No 45
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=88.92 E-value=1.1 Score=42.96 Aligned_cols=42 Identities=24% Similarity=0.286 Sum_probs=27.9
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.|++.+.-.+.-+|+|+|.|.|. +...|+. |..++||||.+.
T Consensus 25 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~ 66 (261)
T 3ege_A 25 AIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEPSI 66 (261)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECSCH
T ss_pred HHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeCCH
Confidence 44555544455689999999986 3344443 336999999764
No 46
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=88.77 E-value=10 Score=36.61 Aligned_cols=103 Identities=18% Similarity=0.221 Sum_probs=57.9
Q ss_pred CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCc
Q 009376 271 EDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGY 350 (536)
Q Consensus 271 e~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ 350 (536)
.+...|+|+|.|.|. +...|+.+- |+..++||||.+.. .++.+.+ .++..+..++|... +..
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~~~~v~gvD~s~~------~~~~a~~----~~~~~~~~v~~~~~--d~~ 82 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PEGSKYTGIDSGET------LLAEARE----LFRLLPYDSEFLEG--DAT 82 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CTTCEEEEEESCHH------HHHHHHH----HHHSSSSEEEEEES--CTT
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CCCCEEEEEECCHH------HHHHHHH----HHHhcCCceEEEEc--chh
Confidence 355789999999984 444555552 23479999997642 2333333 33445555555443 222
Q ss_pred cccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHH-HHhcCCcEEEEE
Q 009376 351 DVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLML-VKRLSPKVVTLV 405 (536)
Q Consensus 351 ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~-VksL~Pkvvtlv 405 (536)
++. . ++..=+|-+...|||+++ + +.+|+. .+.|+|.-.+++
T Consensus 83 ~~~-----~-~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~LkpgG~l~~ 124 (284)
T 3gu3_A 83 EIE-----L-NDKYDIAICHAFLLHMTT-------P-ETMLQKMIHSVKKGGKIIC 124 (284)
T ss_dssp TCC-----C-SSCEEEEEEESCGGGCSS-------H-HHHHHHHHHTEEEEEEEEE
T ss_pred hcC-----c-CCCeeEEEECChhhcCCC-------H-HHHHHHHHHHcCCCCEEEE
Confidence 221 1 233334445567888865 2 345554 477899876643
No 47
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=88.17 E-value=5 Score=35.28 Aligned_cols=41 Identities=24% Similarity=0.340 Sum_probs=26.2
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.+++.+-. +.-+|+|+|.+.|. +...|+.+ | .++|||+.+.
T Consensus 38 ~~l~~~~~-~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~~~ 78 (195)
T 3cgg_A 38 RLIDAMAP-RGAKILDAGCGQGR----IGGYLSKQ--G---HDVLGTDLDP 78 (195)
T ss_dssp HHHHHHSC-TTCEEEEETCTTTH----HHHHHHHT--T---CEEEEEESCH
T ss_pred HHHHHhcc-CCCeEEEECCCCCH----HHHHHHHC--C---CcEEEEcCCH
Confidence 44455432 34589999998876 33455555 2 3899999764
No 48
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=87.77 E-value=6.1 Score=36.89 Aligned_cols=110 Identities=18% Similarity=0.171 Sum_probs=61.3
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-- 339 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 339 (536)
..|++.+.-.+.-+|+|+|.|.|..-. .|+.+.+ .++||||.+.. .++... +.++..|++
T Consensus 26 ~~l~~~~~~~~~~~VLDiGcG~G~~~~----~la~~~~----~~v~gvD~s~~------~l~~a~----~~~~~~~~~~~ 87 (256)
T 1nkv_A 26 ATLGRVLRMKPGTRILDLGSGSGEMLC----TWARDHG----ITGTGIDMSSL------FTAQAK----RRAEELGVSER 87 (256)
T ss_dssp HHHHHHTCCCTTCEEEEETCTTCHHHH----HHHHHTC----CEEEEEESCHH------HHHHHH----HHHHHTTCTTT
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHH----HHHHhcC----CeEEEEeCCHH------HHHHHH----HHHHhcCCCcc
Confidence 444555543445589999999987433 3443332 37899997642 243333 344556764
Q ss_pred EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
.+|..... .++. . ++..=+|-|...+||+++ ...+|+.+ +-|+|.-.+++
T Consensus 88 v~~~~~d~--~~~~-----~-~~~fD~V~~~~~~~~~~~--------~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 88 VHFIHNDA--AGYV-----A-NEKCDVAACVGATWIAGG--------FAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp EEEEESCC--TTCC-----C-SSCEEEEEEESCGGGTSS--------SHHHHHHHTTSEEEEEEEEE
T ss_pred eEEEECCh--HhCC-----c-CCCCCEEEECCChHhcCC--------HHHHHHHHHHHcCCCeEEEE
Confidence 66654322 2221 1 233333445667888864 13555555 67899866544
No 49
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=87.43 E-value=7.1 Score=35.50 Aligned_cols=111 Identities=14% Similarity=0.120 Sum_probs=62.9
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEE
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEF 342 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF 342 (536)
.|.+.+...+.-+|+|+|.|.|. +...|+.+ .-++||||.+.. .++.+.+++. ..+ .++|
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-----~~~v~~vD~s~~------~~~~a~~~~~----~~~-~~~~ 101 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH-----CKRLTVIDVMPR------AIGRACQRTK----RWS-HISW 101 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSH----HHHHHGGG-----EEEEEEEESCHH------HHHHHHHHTT----TCS-SEEE
T ss_pred HHHHHcccCCCCcEEEEcCCCCH----HHHHHHHc-----CCEEEEEECCHH------HHHHHHHhcc----cCC-CeEE
Confidence 34445556677899999999984 44556655 249999997642 2444433332 222 3444
Q ss_pred EEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHH-HHhcCCcEEEEEe
Q 009376 343 HAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLML-VKRLSPKVVTLVE 406 (536)
Q Consensus 343 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~-VksL~PkvvtlvE 406 (536)
.... ..++. .++..=+|-|...|||+++. ..+..+|+. .+.|+|.-++++.
T Consensus 102 ~~~d--~~~~~------~~~~fD~v~~~~~l~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 102 AATD--ILQFS------TAELFDLIVVAEVLYYLEDM-----TQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp EECC--TTTCC------CSCCEEEEEEESCGGGSSSH-----HHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEcc--hhhCC------CCCCccEEEEccHHHhCCCH-----HHHHHHHHHHHHHcCCCCEEEEE
Confidence 4332 22221 12333344455788999752 223345554 4678998776653
No 50
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=87.15 E-value=1 Score=43.37 Aligned_cols=125 Identities=14% Similarity=0.110 Sum_probs=64.9
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcC-CcE
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFK-VPF 340 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g-vpF 340 (536)
..|++.+...+.-+|+|+|.|.|. +...|+.+ |+ ++||||.+.. .++.+.+++.+.....+ ..+
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~------~l~~a~~~~~~~~~~~~~~~~ 111 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDASDK------MLKYALKERWNRRKEPAFDKW 111 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEESCHH------HHHHHHHHHHHTTTSHHHHTC
T ss_pred HHHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEECCHH------HHHHHHHhhhhccccccccee
Confidence 445555555566789999999986 33445555 33 9999998643 35555444322111111 123
Q ss_pred EEEEeecCCccccccCccccCCceEEEeec-cccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFA-FMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~-~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
+|... +..++. ..+ ..++..=+|-|. ..|||+++-..... .+..+|+.+ +.|+|.-++++.
T Consensus 112 ~~~~~--d~~~~~-~~~-~~~~~fD~V~~~g~~l~~~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 112 VIEEA--NWLTLD-KDV-PAGDGFDAVICLGNSFAHLPDSKGDQS-EHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp EEEEC--CGGGHH-HHS-CCTTCEEEEEECTTCGGGSCCSSSSSH-HHHHHHHHHHHTEEEEEEEEEE
T ss_pred eEeec--ChhhCc-ccc-ccCCCeEEEEEcChHHhhcCccccCHH-HHHHHHHHHHHHcCCCeEEEEE
Confidence 33222 111111 011 223334344454 68999987222212 244566555 678998666554
No 51
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=87.06 E-value=7.5 Score=35.37 Aligned_cols=102 Identities=13% Similarity=0.132 Sum_probs=54.1
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCccc
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDV 352 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 352 (536)
.-.|+|+|.|.|. +...|+.+ ++ ++||||.+.. .++.+.+++ +..+...+|..... .++
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~---~v~~vD~s~~------~~~~a~~~~----~~~~~~~~~~~~d~--~~~ 97 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF---EVVGVDISED------MIRKAREYA----KSRESNVEFIVGDA--RKL 97 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCHH------HHHHHHHHH----HHTTCCCEEEECCT--TSC
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC---EEEEEECCHH------HHHHHHHHH----HhcCCCceEEECch--hcC
Confidence 4579999999884 33455555 33 9999997642 244444433 33344455543322 221
Q ss_pred cccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHH-HHhcCCcEEEEEe
Q 009376 353 QLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLML-VKRLSPKVVTLVE 406 (536)
Q Consensus 353 ~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~-VksL~PkvvtlvE 406 (536)
. +.-..=+.|+.|.++.+||.. ++ ..+|+. .+.|+|.-++++.
T Consensus 98 ~---~~~~~~D~v~~~~~~~~~~~~-------~~-~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 98 S---FEDKTFDYVIFIDSIVHFEPL-------EL-NQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp C---SCTTCEEEEEEESCGGGCCHH-------HH-HHHHHHHHHHEEEEEEEEEE
T ss_pred C---CCCCcEEEEEEcCchHhCCHH-------HH-HHHHHHHHHHcCCCcEEEEE
Confidence 1 111112456666555455542 23 345555 4678998665443
No 52
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=86.86 E-value=2 Score=42.17 Aligned_cols=106 Identities=16% Similarity=0.174 Sum_probs=58.6
Q ss_pred eEEEecccCC---ccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCc
Q 009376 274 VHIIDFQIGQ---GSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGY 350 (536)
Q Consensus 274 VHIIDf~I~~---G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ 350 (536)
-+|+|+|.|. |. +..+++ .+. |..|||+||.+.. .++...+++. . .-..+|........
T Consensus 79 ~~vLDlGcG~pt~G~-~~~~~~---~~~---p~~~v~~vD~sp~------~l~~Ar~~~~---~--~~~v~~~~~D~~~~ 140 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQN-THEVAQ---SVN---PDARVVYVDIDPM------VLTHGRALLA---K--DPNTAVFTADVRDP 140 (274)
T ss_dssp CEEEEETCCSCCSSC-HHHHHH---HHC---TTCEEEEEESSHH------HHHHHHHHHT---T--CTTEEEEECCTTCH
T ss_pred CEEEEECCCCCCCCh-HHHHHH---HhC---CCCEEEEEECChH------HHHHHHHhcC---C--CCCeEEEEeeCCCc
Confidence 4899999998 73 333333 221 3479999997632 3555544442 1 12345544332211
Q ss_pred c-c-c-c---cCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHh-cCCcEEEEE
Q 009376 351 D-V-Q-L---ENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKR-LSPKVVTLV 405 (536)
Q Consensus 351 e-v-~-~---~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~Vks-L~Pkvvtlv 405 (536)
+ + . + +.+ ..+...+|-+...|||++++. ...+|+.++. |+|.-.+++
T Consensus 141 ~~~~~~~~~~~~~--d~~~~d~v~~~~vlh~~~d~~------~~~~l~~~~~~L~pGG~l~i 194 (274)
T 2qe6_A 141 EYILNHPDVRRMI--DFSRPAAIMLVGMLHYLSPDV------VDRVVGAYRDALAPGSYLFM 194 (274)
T ss_dssp HHHHHSHHHHHHC--CTTSCCEEEETTTGGGSCTTT------HHHHHHHHHHHSCTTCEEEE
T ss_pred hhhhccchhhccC--CCCCCEEEEEechhhhCCcHH------HHHHHHHHHHhCCCCcEEEE
Confidence 0 0 0 0 111 123556677888999998752 3567777755 999755433
No 53
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=86.63 E-value=6.3 Score=38.26 Aligned_cols=115 Identities=13% Similarity=0.096 Sum_probs=63.2
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--E
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--F 340 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--F 340 (536)
.|++.+.-.+.-+|+|+|.|.|.-- ..|+.+.+ .++||||.+.. .++.+.++ ++..|++ .
T Consensus 63 ~~~~~~~~~~~~~vLDiGcG~G~~~----~~la~~~~----~~v~gvD~s~~------~~~~a~~~----~~~~~~~~~v 124 (302)
T 3hem_A 63 LALDKLNLEPGMTLLDIGCGWGSTM----RHAVAEYD----VNVIGLTLSEN------QYAHDKAM----FDEVDSPRRK 124 (302)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHH----HHHHHHHC----CEEEEEECCHH------HHHHHHHH----HHHSCCSSCE
T ss_pred HHHHHcCCCCcCEEEEeeccCcHHH----HHHHHhCC----CEEEEEECCHH------HHHHHHHH----HHhcCCCCce
Confidence 3556555455668999999877533 44444422 58999998642 24444443 4456765 4
Q ss_pred EEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCcc-ccchHHHHHHHH-HhcCCcEEEEE
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVS-TENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~-~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
+|.. .+..++ . ..=++|+ +...+||++|.... .....+.+|+.+ +-|+|.-.+++
T Consensus 125 ~~~~--~d~~~~-~-----~~fD~v~--~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 125 EVRI--QGWEEF-D-----EPVDRIV--SLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp EEEE--CCGGGC-C-----CCCSEEE--EESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred EEEE--CCHHHc-C-----CCccEEE--EcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 4433 222222 1 1113344 33678999774110 012345666655 67899866554
No 54
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=86.59 E-value=2.8 Score=42.46 Aligned_cols=106 Identities=22% Similarity=0.265 Sum_probs=57.7
Q ss_pred HHHHHhcc-cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcE
Q 009376 262 GAIAEAMK-DEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPF 340 (536)
Q Consensus 262 qAILEA~~-ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpF 340 (536)
..|++.+. -.+.-+|+|+|.|.|.- ...|+.+- |.+++|++|.+. . + +.|+... ..
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---~~~~~~~~D~~~-~------~--------~~a~~~~-~v 254 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRN----LELIISKY---PLIKGINFDLPQ-V------I--------ENAPPLS-GI 254 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEECHH-H------H--------TTCCCCT-TE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHH----HHHHHHHC---CCCeEEEeChHH-H------H--------HhhhhcC-CC
Confidence 46677764 23457899999998864 34444442 567999998631 1 1 1122211 24
Q ss_pred EEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEe
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVT-LVE 406 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvt-lvE 406 (536)
+|..-.. .+ .+ ++ +=+|-+...|||++|+ ....+|+.+ +.|+|.-.+ ++|
T Consensus 255 ~~~~~d~--~~----~~---~~-~D~v~~~~~lh~~~d~------~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 255 EHVGGDM--FA----SV---PQ-GDAMILKAVCHNWSDE------KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp EEEECCT--TT----CC---CC-EEEEEEESSGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeCCc--cc----CC---CC-CCEEEEecccccCCHH------HHHHHHHHHHHhcCCCCEEEEEE
Confidence 4433221 11 11 11 3344456788998763 123566666 667987654 454
No 55
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=86.10 E-value=4.2 Score=38.99 Aligned_cols=106 Identities=18% Similarity=0.198 Sum_probs=58.2
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEE
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFE 341 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFe 341 (536)
..+++.+.-.+.-.|+|+|.|.|.-.. .|+. + ..++||||.+.. .++...+++ -++ +
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~----~l~~-~----~~~v~gvD~s~~------~~~~a~~~~------~~~--~ 103 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTE----KIAQ-S----GAEVLGTDNAAT------MIEKARQNY------PHL--H 103 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHH----HHHH-T----TCEEEEEESCHH------HHHHHHHHC------TTS--C
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHH----HHHh-C----CCeEEEEECCHH------HHHHHHhhC------CCC--E
Confidence 445666655555689999999886433 3443 2 358999997642 233333322 133 3
Q ss_pred EEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHH-HHhcCCcEEEEEe
Q 009376 342 FHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLML-VKRLSPKVVTLVE 406 (536)
Q Consensus 342 F~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~-VksL~PkvvtlvE 406 (536)
|... +..+ +.. ++..=+|-+...|||++| + ..+|+. .+-|+|.-.+++.
T Consensus 104 ~~~~--d~~~-----~~~-~~~fD~v~~~~~l~~~~d-------~-~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 104 FDVA--DARN-----FRV-DKPLDAVFSNAMLHWVKE-------P-EAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp EEEC--CTTT-----CCC-SSCEEEEEEESCGGGCSC-------H-HHHHHHHHHHEEEEEEEEEE
T ss_pred EEEC--Chhh-----CCc-CCCcCEEEEcchhhhCcC-------H-HHHHHHHHHhcCCCcEEEEE
Confidence 3322 1121 222 233334445568899864 2 345554 4778998766554
No 56
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=85.30 E-value=7.1 Score=37.41 Aligned_cols=109 Identities=21% Similarity=0.218 Sum_probs=61.1
Q ss_pred HHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--EE
Q 009376 264 IAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--FE 341 (536)
Q Consensus 264 ILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--Fe 341 (536)
+++.+... .-+|+|+|.|.|. +...|+.+ | .++||||.+.. .++.+.++ ++..|++ .+
T Consensus 61 ~l~~~~~~-~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~------~~~~a~~~----~~~~~~~~~v~ 120 (285)
T 4htf_A 61 VLAEMGPQ-KLRVLDAGGGEGQ----TAIKMAER--G---HQVILCDLSAQ------MIDRAKQA----AEAKGVSDNMQ 120 (285)
T ss_dssp HHHHTCSS-CCEEEEETCTTCH----HHHHHHHT--T---CEEEEEESCHH------HHHHHHHH----HHC-CCGGGEE
T ss_pred HHHhcCCC-CCEEEEeCCcchH----HHHHHHHC--C---CEEEEEECCHH------HHHHHHHH----HHhcCCCcceE
Confidence 34444333 5689999999984 45566665 2 48999997642 24444333 4445664 44
Q ss_pred EEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 342 FHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 342 F~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
|... +..++. ...++..=+|-|...|||+++ + ..+|+.+ +-|+|.-++++.
T Consensus 121 ~~~~--d~~~~~----~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 121 FIHC--AAQDVA----SHLETPVDLILFHAVLEWVAD-------P-RSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp EEES--CGGGTG----GGCSSCEEEEEEESCGGGCSC-------H-HHHHHHHHHTEEEEEEEEEE
T ss_pred EEEc--CHHHhh----hhcCCCceEEEECchhhcccC-------H-HHHHHHHHHHcCCCeEEEEE
Confidence 5432 222221 022343444445678899864 2 3455554 678998777654
No 57
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=84.92 E-value=4.3 Score=37.38 Aligned_cols=103 Identities=10% Similarity=0.126 Sum_probs=57.2
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCcc
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYD 351 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~e 351 (536)
+.-+|+|+|.|.|.- ...|+.+ | .++||||.+.. .++.+.+++ ...++.++|..... .+
T Consensus 37 ~~~~vLdiG~G~G~~----~~~l~~~--~---~~~~~~D~s~~------~~~~a~~~~----~~~~~~~~~~~~d~--~~ 95 (246)
T 1y8c_A 37 VFDDYLDLACGTGNL----TENLCPK--F---KNTWAVDLSQE------MLSEAENKF----RSQGLKPRLACQDI--SN 95 (246)
T ss_dssp CTTEEEEETCTTSTT----HHHHGGG--S---SEEEEECSCHH------HHHHHHHHH----HHTTCCCEEECCCG--GG
T ss_pred CCCeEEEeCCCCCHH----HHHHHHC--C---CcEEEEECCHH------HHHHHHHHH----hhcCCCeEEEeccc--cc
Confidence 456899999999873 3345544 2 37999997642 244444443 33454455543221 11
Q ss_pred ccccCccccCCceEEEeecc-ccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 352 VQLENLRVQPGEAVAVNFAF-MLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 352 v~~~~L~i~~gEaLaVN~~~-~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
+ ... +..=+|-+.. .|||+++. .+ ...+|+.+ +.|+|.-+++++
T Consensus 96 ~-----~~~-~~fD~v~~~~~~l~~~~~~----~~-~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 96 L-----NIN-RKFDLITCCLDSTNYIIDS----DD-LKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp C-----CCS-CCEEEEEECTTGGGGCCSH----HH-HHHHHHHHHTTEEEEEEEEEE
T ss_pred C-----Ccc-CCceEEEEcCccccccCCH----HH-HHHHHHHHHHhcCCCcEEEEE
Confidence 1 111 2222333455 78998642 12 34566655 668998777664
No 58
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=84.04 E-value=6.8 Score=35.91 Aligned_cols=104 Identities=14% Similarity=0.148 Sum_probs=56.1
Q ss_pred HHHhccc-CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEE
Q 009376 264 IAEAMKD-EDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEF 342 (536)
Q Consensus 264 ILEA~~g-e~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF 342 (536)
+++.+.. .+.-+|+|+|.|.|. +...|+.+ ++ ++||||.+.. .++...+++. -.++|
T Consensus 33 ~~~~l~~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~------~~~~a~~~~~-------~~v~~ 90 (250)
T 2p7i_A 33 MVRAFTPFFRPGNLLELGSFKGD----FTSRLQEH--FN---DITCVEASEE------AISHAQGRLK-------DGITY 90 (250)
T ss_dssp HHHHHGGGCCSSCEEEESCTTSH----HHHHHTTT--CS---CEEEEESCHH------HHHHHHHHSC-------SCEEE
T ss_pred HHHHHHhhcCCCcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCCHH------HHHHHHHhhh-------CCeEE
Confidence 4444431 233469999998885 44556554 33 7999997642 2333322221 13444
Q ss_pred EEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHH--hcCCcEEEEE
Q 009376 343 HAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVK--RLSPKVVTLV 405 (536)
Q Consensus 343 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~Vk--sL~Pkvvtlv 405 (536)
... +..++ ..++..=+|-+...|||+++ .+.+|+.++ -|+|.-.+++
T Consensus 91 ~~~--d~~~~------~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 91 IHS--RFEDA------QLPRRYDNIVLTHVLEHIDD--------PVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp EES--CGGGC------CCSSCEEEEEEESCGGGCSS--------HHHHHHHHHHTTEEEEEEEEE
T ss_pred EEc--cHHHc------CcCCcccEEEEhhHHHhhcC--------HHHHHHHHHHHhcCCCCEEEE
Confidence 332 22221 12233334445668999965 246777665 6899765544
No 59
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=83.88 E-value=5.1 Score=39.83 Aligned_cols=109 Identities=9% Similarity=0.188 Sum_probs=61.7
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC-------cEEEEEe
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV-------PFEFHAA 345 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-------pFeF~~V 345 (536)
.-+|+|+|.|.|.- +..++.+.+ -++||||.+.. .++.+.++..+ .++ .++|...
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~~~----~~v~GiD~S~~------~l~~A~~~~~~----~~~~~~~~~~~~~f~~~ 110 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYGEI----ALLVATDPDAD------AIARGNERYNK----LNSGIKTKYYKFDYIQE 110 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHTTC----SEEEEEESCHH------HHHHHHHHHHH----HCC----CCCEEEEEEC
T ss_pred CCeEEEEecCCcHh----HHHHHhcCC----CeEEEEECCHH------HHHHHHHHHHh----ccccccccccccchhhh
Confidence 45799999998842 222333321 37999998753 36666655433 233 2566554
Q ss_pred ecCCccccccCc--cccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 346 NMSGYDVQLENL--RVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 346 ~~~~~ev~~~~L--~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
.+...... ..| ....+..=+|-|.+.||++.+.. +++.+|+.+ +.|+|.-+.++
T Consensus 111 d~~~d~~~-~~l~~~~~~~~FD~V~~~~~lhy~~~~~-----~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 111 TIRSDTFV-SSVREVFYFGKFNIIDWQFAIHYSFHPR-----HYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp CTTSSSHH-HHHHTTCCSSCEEEEEEESCGGGTCSTT-----THHHHHHHHHHHEEEEEEEEE
T ss_pred hcccchhh-hhhhccccCCCeeEEEECchHHHhCCHH-----HHHHHHHHHHHHcCCCCEEEE
Confidence 33221110 111 01234455677888999975421 235666666 67899877755
No 60
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=83.52 E-value=1.9 Score=39.43 Aligned_cols=44 Identities=23% Similarity=0.412 Sum_probs=32.1
Q ss_pred cHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 261 NGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 261 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
-..+++.+...+.-.|+|+|.|.|. +...|+.+ + .++||||.+.
T Consensus 34 ~~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~ 77 (220)
T 3hnr_A 34 YEDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA--G---RTVYGIEPSR 77 (220)
T ss_dssp HHHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT--T---CEEEEECSCH
T ss_pred HHHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC--C---CeEEEEeCCH
Confidence 3567777766677799999999984 45556665 2 4899999764
No 61
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=83.32 E-value=12 Score=34.80 Aligned_cols=103 Identities=17% Similarity=0.298 Sum_probs=55.3
Q ss_pred CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCc
Q 009376 271 EDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGY 350 (536)
Q Consensus 271 e~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ 350 (536)
.+.-+|+|+|.|.|. +...|+.+ + .++||||.+.. .++...+++ +..|+.++|..... .
T Consensus 40 ~~~~~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s~~------~l~~a~~~~----~~~~~~v~~~~~d~--~ 98 (252)
T 1wzn_A 40 REVRRVLDLACGTGI----PTLELAER-G----YEVVGLDLHEE------MLRVARRKA----KERNLKIEFLQGDV--L 98 (252)
T ss_dssp SCCCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHH------HHHHHHHHH----HHTTCCCEEEESCG--G
T ss_pred cCCCEEEEeCCCCCH----HHHHHHHC-C----CeEEEEECCHH------HHHHHHHHH----HhcCCceEEEECCh--h
Confidence 344689999999985 33445555 2 38999997642 244444443 34466666644322 1
Q ss_pred cccccCccccCCce-EEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 351 DVQLENLRVQPGEA-VAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 351 ev~~~~L~i~~gEa-LaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
++. . ++.. +|+...-.+|++.. .....+|+.+ +.|+|.-+++++
T Consensus 99 ~~~-----~-~~~fD~v~~~~~~~~~~~~------~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 99 EIA-----F-KNEFDAVTMFFSTIMYFDE------EDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GCC-----C-CSCEEEEEECSSGGGGSCH------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcc-----c-CCCccEEEEcCCchhcCCH------HHHHHHHHHHHHHcCCCeEEEEe
Confidence 211 1 1221 33322122344421 2244566555 678999888776
No 62
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=83.09 E-value=7.8 Score=34.94 Aligned_cols=108 Identities=23% Similarity=0.310 Sum_probs=60.7
Q ss_pred cHHHHHhccc-CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcC-C
Q 009376 261 NGAIAEAMKD-EDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFK-V 338 (536)
Q Consensus 261 NqAILEA~~g-e~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g-v 338 (536)
...|++.+.. ...-+|+|+|.|.|. +...|+.+ | .++||||.+.. ..+.|+..| -
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~s~~--------------~~~~a~~~~~~ 90 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL--A---DRVTALDGSAE--------------MIAEAGRHGLD 90 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH--S---SEEEEEESCHH--------------HHHHHGGGCCT
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc--C---CeEEEEeCCHH--------------HHHHHHhcCCC
Confidence 4456666652 333599999999986 34444444 2 38999997642 233344445 2
Q ss_pred cEEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 339 PFEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 339 pFeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
..+|..... .+ + ..++..=+|-|...|||++++ .+..+|+.+ +.|+|.-++++
T Consensus 91 ~~~~~~~d~--~~-----~-~~~~~~D~v~~~~~l~~~~~~------~~~~~l~~~~~~L~pgG~l~~ 144 (218)
T 3ou2_A 91 NVEFRQQDL--FD-----W-TPDRQWDAVFFAHWLAHVPDD------RFEAFWESVRSAVAPGGVVEF 144 (218)
T ss_dssp TEEEEECCT--TS-----C-CCSSCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEE
T ss_pred CeEEEeccc--cc-----C-CCCCceeEEEEechhhcCCHH------HHHHHHHHHHHHcCCCeEEEE
Confidence 345443222 11 1 223333344456789999752 134566655 67899765543
No 63
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=82.96 E-value=3.1 Score=41.81 Aligned_cols=43 Identities=19% Similarity=0.224 Sum_probs=28.3
Q ss_pred HHHHhc--ccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 009376 263 AIAEAM--KDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDS 312 (536)
Q Consensus 263 AILEA~--~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~ 312 (536)
.|++.+ .=.+.-+|+|+|-+.|.- ...|+.+- |.+++|++|.+
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~ 226 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGV----TKLIHEIF---PHLKCTVFDQP 226 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHH----HHHHHHHC---TTSEEEEEECH
T ss_pred HHHHhcchhccCCCEEEEECCCcCHH----HHHHHHHC---CCCeEEEeccH
Confidence 566666 112345899999999864 34444442 56799999864
No 64
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=82.68 E-value=5.4 Score=37.29 Aligned_cols=107 Identities=21% Similarity=0.168 Sum_probs=59.2
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEE
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEF 342 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF 342 (536)
.+++.+...+.-+|+|+|.|.|.--..|.+.+ |..++||||.+.. .++...++ .-.++|
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~s~~------~~~~a~~~--------~~~~~~ 82 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDSDDD------MLEKAADR--------LPNTNF 82 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEESCHH------HHHHHHHH--------STTSEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEECCHH------HHHHHHHh--------CCCcEE
Confidence 34555544445679999999987655555544 2347999997642 23333322 223344
Q ss_pred EEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 343 HAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 343 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
.... ..+ +. .++..=+|-+...|||+++ ...+|+.+ +.|+|.-.+++.
T Consensus 83 ~~~d--~~~-----~~-~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 83 GKAD--LAT-----WK-PAQKADLLYANAVFQWVPD--------HLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp EECC--TTT-----CC-CSSCEEEEEEESCGGGSTT--------HHHHHHHHGGGEEEEEEEEEE
T ss_pred EECC--hhh-----cC-ccCCcCEEEEeCchhhCCC--------HHHHHHHHHHhcCCCeEEEEE
Confidence 3322 221 11 1232333445567899854 34566665 778998666543
No 65
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=82.21 E-value=1.8 Score=39.83 Aligned_cols=117 Identities=14% Similarity=0.117 Sum_probs=62.9
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC-cEE
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV-PFE 341 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-pFe 341 (536)
..++.+...+.-+|+|+|.|.|.--. .|+.+. |..++||||.+.. .++.+.++..+-++..++ .++
T Consensus 18 ~~~~~l~~~~~~~vLDiGcG~G~~~~----~la~~~---p~~~v~gvD~s~~------~l~~~~~~a~~~~~~~~~~~v~ 84 (218)
T 3mq2_A 18 AEFEQLRSQYDDVVLDVGTGDGKHPY----KVARQN---PSRLVVALDADKS------RMEKISAKAAAKPAKGGLPNLL 84 (218)
T ss_dssp HHHHHHHTTSSEEEEEESCTTCHHHH----HHHHHC---TTEEEEEEESCGG------GGHHHHHHHTSCGGGTCCTTEE
T ss_pred HHHHHhhccCCCEEEEecCCCCHHHH----HHHHHC---CCCEEEEEECCHH------HHHHHHHHHHHhhhhcCCCceE
Confidence 34455555566789999999985433 334331 4579999998753 255444444333444565 355
Q ss_pred EEEeecCCccccccCccccCCceEEEeeccc-c--CCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 342 FHAANMSGYDVQLENLRVQPGEAVAVNFAFM-L--HHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 342 F~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~-L--H~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
|... +..++.. .-.. +.+.+.+.+. + ||+++. ..+|+.+ +-|+|.-.+++.
T Consensus 85 ~~~~--d~~~l~~---~~~~-d~v~~~~~~~~~~~~~~~~~--------~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 85 YLWA--TAERLPP---LSGV-GELHVLMPWGSLLRGVLGSS--------PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp EEEC--CSTTCCS---CCCE-EEEEEESCCHHHHHHHHTSS--------SHHHHHHHHTEEEEEEEEEE
T ss_pred EEec--chhhCCC---CCCC-CEEEEEccchhhhhhhhccH--------HHHHHHHHHHcCCCcEEEEE
Confidence 5432 2222211 1111 3333333222 2 366542 2455554 678999887764
No 66
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=81.91 E-value=14 Score=33.90 Aligned_cols=109 Identities=20% Similarity=0.195 Sum_probs=58.5
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEE
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFE 341 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFe 341 (536)
..|.+.+...+.-.|+|+|.|.|. +...|+.+ |. -++||||.+.. .++...+++. . -.++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~--~~v~~vD~s~~------~~~~a~~~~~----~--~~~~ 92 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA--SYVLGLDLSEK------MLARARAAGP----D--TGIT 92 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESCHH------HHHHHHHTSC----S--SSEE
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC--CeEEEEcCCHH------HHHHHHHhcc----c--CCce
Confidence 467777765556689999999885 34455555 22 28999997632 1332222211 0 1244
Q ss_pred EEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 342 FHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 342 F~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
|.... ..+ +...++..=+|-+...|||+++ ...+|+.+ +.|+|.-.+++
T Consensus 93 ~~~~d--~~~-----~~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 93 YERAD--LDK-----LHLPQDSFDLAYSSLALHYVED--------VARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp EEECC--GGG-----CCCCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred EEEcC--hhh-----ccCCCCCceEEEEeccccccch--------HHHHHHHHHHhcCcCcEEEE
Confidence 43322 111 1122333223334457899854 24555555 67899866654
No 67
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=81.64 E-value=2.1 Score=40.02 Aligned_cols=96 Identities=18% Similarity=0.273 Sum_probs=49.7
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCccc
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDV 352 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 352 (536)
.-+|+|+|.|.|. +...|+.+ | .++||||.+.. ..+.|+.. ++|.. .+..+.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~--------------~~~~a~~~---~~~~~--~d~~~~ 93 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G---IESIGVDINED--------------MIKFCEGK---FNVVK--SDAIEY 93 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSCHH--------------HHHHHHTT---SEEEC--SCHHHH
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECCHH--------------HHHHHHhh---cceee--ccHHHH
Confidence 3579999988875 34455554 2 26899997642 12233333 33322 111111
Q ss_pred cccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 353 QLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 353 ~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
.. ...++..=+|-+...|||++++ ....+|+.+ +.|+|.-++++
T Consensus 94 -~~--~~~~~~fD~i~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 94 -LK--SLPDKYLDGVMISHFVEHLDPE------RLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp -HH--TSCTTCBSEEEEESCGGGSCGG------GHHHHHHHHHHHBCTTCCEEE
T ss_pred -hh--hcCCCCeeEEEECCchhhCCcH------HHHHHHHHHHHHcCCCcEEEE
Confidence 00 1122322233345688999742 134566655 67899754444
No 68
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=81.42 E-value=9.4 Score=35.58 Aligned_cols=102 Identities=18% Similarity=0.277 Sum_probs=56.0
Q ss_pred CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCc
Q 009376 271 EDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGY 350 (536)
Q Consensus 271 e~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ 350 (536)
.+.-+|+|+|.|.|.-- ..|+.+ + .++||||.+.. .++...+++ +...-.++|.... ..
T Consensus 38 ~~~~~vLDiG~G~G~~~----~~l~~~-~----~~v~~vD~s~~------~~~~a~~~~----~~~~~~~~~~~~d--~~ 96 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIA----LPLIAR-G----YRYIALDADAA------MLEVFRQKI----AGVDRKVQVVQAD--AR 96 (263)
T ss_dssp SSCCEEEEETCTTSTTH----HHHHTT-T----CEEEEEESCHH------HHHHHHHHT----TTSCTTEEEEESC--TT
T ss_pred CCCCEEEEeCCcCCHHH----HHHHHC-C----CEEEEEECCHH------HHHHHHHHh----hccCCceEEEEcc--cc
Confidence 34568999999998643 344544 2 48999997642 244443332 2223345554332 22
Q ss_pred cccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 351 DVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 351 ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
+ +...++..=+|-+...|||+++ ...+|+.+ +-|+|.-.+++.
T Consensus 97 ~-----~~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 97 A-----IPLPDESVHGVIVVHLWHLVPD--------WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp S-----CCSCTTCEEEEEEESCGGGCTT--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred c-----CCCCCCCeeEEEECCchhhcCC--------HHHHHHHHHHHCCCCcEEEEE
Confidence 2 2222333333445567899864 23455554 678998766554
No 69
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=81.26 E-value=2 Score=41.84 Aligned_cols=111 Identities=19% Similarity=0.191 Sum_probs=61.5
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcC----
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFK---- 337 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g---- 337 (536)
..+++.+..... .|+|+|.|.|. +...|+.+ | .++||||.+.. .++.+.+++ ...+
T Consensus 73 ~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~--~---~~v~gvD~s~~------~~~~a~~~~----~~~~~~~~ 132 (299)
T 3g2m_A 73 REFATRTGPVSG-PVLELAAGMGR----LTFPFLDL--G---WEVTALELSTS------VLAAFRKRL----AEAPADVR 132 (299)
T ss_dssp HHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT--T---CCEEEEESCHH------HHHHHHHHH----HTSCHHHH
T ss_pred HHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc--C---CeEEEEECCHH------HHHHHHHHH----hhcccccc
Confidence 345555544334 89999999987 44455555 2 47999997642 244444443 3333
Q ss_pred CcEEEEEeecCCccccccCccccCCce-EEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 338 VPFEFHAANMSGYDVQLENLRVQPGEA-VAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 338 vpFeF~~V~~~~~ev~~~~L~i~~gEa-LaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
..++|..... .++ .. ++.. +||.....+|++++ ..+..+|+.+ +.|+|.-.++++
T Consensus 133 ~~v~~~~~d~--~~~-----~~-~~~fD~v~~~~~~~~~~~~------~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 133 DRCTLVQGDM--SAF-----AL-DKRFGTVVISSGSINELDE------ADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp TTEEEEECBT--TBC-----CC-SCCEEEEEECHHHHTTSCH------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEEeCch--hcC-----Cc-CCCcCEEEECCcccccCCH------HHHHHHHHHHHHHcCCCcEEEEE
Confidence 3455544322 221 11 2322 34434455676642 2245666666 678998777664
No 70
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=80.55 E-value=14 Score=34.01 Aligned_cols=108 Identities=18% Similarity=0.213 Sum_probs=58.6
Q ss_pred HHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEE
Q 009376 264 IAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFH 343 (536)
Q Consensus 264 ILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~ 343 (536)
|++.+... -.|+|+|.|.|. +...|+.+ .++||||.+.. .++.+.+++ +..+...+|.
T Consensus 27 ~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~s~~------~~~~a~~~~----~~~~~~~~~~ 84 (243)
T 3d2l_A 27 VLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDLSEE------MLEIAQEKA----METNRHVDFW 84 (243)
T ss_dssp HHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEESCHH------HHHHHHHHH----HHTTCCCEEE
T ss_pred HHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEECCHH------HHHHHHHhh----hhcCCceEEE
Confidence 44444432 478999998885 44456555 48999997642 244444433 3344455554
Q ss_pred EeecCCccccccCccccCCceEEEeecc-ccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 344 AANMSGYDVQLENLRVQPGEAVAVNFAF-MLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 344 ~V~~~~~ev~~~~L~i~~gEaLaVN~~~-~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
.... .++ ... +..=+|-+.. .+||+.+. .....+|+.+ +.|+|.-+++++
T Consensus 85 ~~d~--~~~-----~~~-~~fD~v~~~~~~~~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 85 VQDM--REL-----ELP-EPVDAITILCDSLNYLQTE-----ADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp ECCG--GGC-----CCS-SCEEEEEECTTGGGGCCSH-----HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EcCh--hhc-----CCC-CCcCEEEEeCCchhhcCCH-----HHHHHHHHHHHHhcCCCeEEEEE
Confidence 4322 111 111 2222222333 68888542 2234555555 678999877764
No 71
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=80.23 E-value=11 Score=32.88 Aligned_cols=102 Identities=14% Similarity=0.161 Sum_probs=57.6
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEE
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEF 342 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF 342 (536)
.+++.+.-.+.-.|+|+|.|.|. +...|+.+- . ++||||.+.. .++.+.++ .-..+|
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~s~~------~~~~a~~~--------~~~v~~ 64 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDINVI------ALKEVKEK--------FDSVIT 64 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECSCHH------HHHHHHHH--------CTTSEE
T ss_pred HHHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeCCHH------HHHHHHHh--------CCCcEE
Confidence 45566655667789999999886 344555442 3 9999997642 23333333 112333
Q ss_pred EEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 343 HAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 343 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
.... +....+..=+|-+...+||+++ ...+|+.+ +.|+|.-.+++
T Consensus 65 ~~~d----------~~~~~~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 65 LSDP----------KEIPDNSVDFILFANSFHDMDD--------KQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp ESSG----------GGSCTTCEEEEEEESCSTTCSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred EeCC----------CCCCCCceEEEEEccchhcccC--------HHHHHHHHHHhcCCCCEEEE
Confidence 2111 2233343334445667899854 24555544 77899766544
No 72
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=80.00 E-value=11 Score=38.37 Aligned_cols=113 Identities=16% Similarity=0.174 Sum_probs=62.9
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-- 339 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 339 (536)
.+|++.....+.-.|+|+|.|.|. +...|+.+ |. -++||||.+ .. ++.+ .+.++..|++
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~----ls~~la~~--g~--~~V~gvD~s-~~------~~~a----~~~~~~~~~~~~ 113 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGI----LAIWSAQA--GA--RKVYAVEAT-KM------ADHA----RALVKANNLDHI 113 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTH----HHHHHHHT--TC--SEEEEEESS-TT------HHHH----HHHHHHTTCTTT
T ss_pred HHHHhccccCCCCEEEEeccCcCH----HHHHHHhc--CC--CEEEEEccH-HH------HHHH----HHHHHHcCCCCe
Confidence 344444343445689999999983 34445555 22 399999986 32 4333 3345556765
Q ss_pred EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
.+|.. .+..++... ..=+.|+.+ +.+|.+..+ ..++.+|+.+ +-|+|.-+++..
T Consensus 114 v~~~~--~d~~~~~~~----~~~D~Iv~~--~~~~~l~~e-----~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 114 VEVIE--GSVEDISLP----EKVDVIISE--WMGYFLLRE-----SMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EEEEE--SCGGGCCCS----SCEEEEEEC--CCBTTBTTT-----CTHHHHHHHHHHHEEEEEEEESS
T ss_pred EEEEE--CchhhcCcC----CcceEEEEc--Chhhcccch-----HHHHHHHHHHHhhCCCCeEEEEe
Confidence 55543 332333221 111234443 344555433 2357788887 889998877654
No 73
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=79.74 E-value=1.9 Score=43.35 Aligned_cols=139 Identities=17% Similarity=0.170 Sum_probs=75.6
Q ss_pred HHHhcCCcchhhhhhhcHHHHHhc----ccCCe-eEEEecccCCccc--hHHHHHHHhcCCCCCCeEEEEeecCCCCccc
Q 009376 245 ILYEVCPYFKFGYMSANGAIAEAM----KDEDR-VHIIDFQIGQGSQ--WITLIQAFAARPGGPPHIRITGIDDSISAYA 317 (536)
Q Consensus 245 ~l~e~~P~~kFa~~tANqAILEA~----~ge~r-VHIIDf~I~~G~Q--WpsLiqaLA~R~gGPP~LRITgI~~~~s~~~ 317 (536)
.+.++.|-++ ...-+|.+-+.-+ .++.. =+|+|+|.|-|+. -..+.|.+ -|..|||+||.+..
T Consensus 47 ~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~------~P~arVv~VD~sp~--- 116 (277)
T 3giw_A 47 AMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSV------APESRVVYVDNDPI--- 116 (277)
T ss_dssp HHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHH------CTTCEEEEEECCHH---
T ss_pred HHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHH------CCCCEEEEEeCChH---
Confidence 3567788875 3445787776643 23323 3799999997552 22233333 14579999998642
Q ss_pred CCChHHHHHHHHHHHHHhcCCcEEEEEeecCCcc--cc----ccCccccCCceEEEeeccccCCCCCCCccccchHHHHH
Q 009376 318 RGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYD--VQ----LENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLL 391 (536)
Q Consensus 318 ~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~e--v~----~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L 391 (536)
.|.....+|.. .-.-..+|........+ +. ...+ ..++.++|-+...|||++|+. .+...+=
T Consensus 117 ---mLa~Ar~~l~~---~~~~~~~~v~aD~~~~~~~l~~~~~~~~~--D~~~p~av~~~avLH~l~d~~----~p~~~l~ 184 (277)
T 3giw_A 117 ---VLTLSQGLLAS---TPEGRTAYVEADMLDPASILDAPELRDTL--DLTRPVALTVIAIVHFVLDED----DAVGIVR 184 (277)
T ss_dssp ---HHHTTHHHHCC---CSSSEEEEEECCTTCHHHHHTCHHHHTTC--CTTSCCEEEEESCGGGSCGGG----CHHHHHH
T ss_pred ---HHHHHHHHhcc---CCCCcEEEEEecccChhhhhccccccccc--CcCCcchHHhhhhHhcCCchh----hHHHHHH
Confidence 24444444421 11113555444332211 00 1122 335555566777899998742 2344444
Q ss_pred HHHHhcCCcEEEEE
Q 009376 392 MLVKRLSPKVVTLV 405 (536)
Q Consensus 392 ~~VksL~Pkvvtlv 405 (536)
+..+.|.|.-+.++
T Consensus 185 ~l~~~L~PGG~Lvl 198 (277)
T 3giw_A 185 RLLEPLPSGSYLAM 198 (277)
T ss_dssp HHHTTSCTTCEEEE
T ss_pred HHHHhCCCCcEEEE
Confidence 66678899865544
No 74
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=79.54 E-value=15 Score=35.57 Aligned_cols=110 Identities=15% Similarity=0.114 Sum_probs=59.3
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCcc
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYD 351 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~e 351 (536)
+.-+|+|+|.|.|.- ...|+.+- ++..++||||.+.. .++.+.+++... ....-.++|..... .+
T Consensus 36 ~~~~vLDiGcG~G~~----~~~la~~~--~~~~~v~gvD~s~~------~~~~a~~~~~~~-~~~~~~v~~~~~d~--~~ 100 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTA----TLQMAQEL--KPFEQIIGSDLSAT------MIKTAEVIKEGS-PDTYKNVSFKISSS--DD 100 (299)
T ss_dssp CCSEEEEETCTTTHH----HHHHHHHS--SCCSEEEEEESCHH------HHHHHHHHHHHC-C-CCTTEEEEECCT--TC
T ss_pred CCCEEEEECCCCCHH----HHHHHHhC--CCCCEEEEEeCCHH------HHHHHHHHHHhc-cCCCCceEEEEcCH--Hh
Confidence 567899999998843 33444321 14569999998642 244444433221 00133556654332 22
Q ss_pred ccccC-ccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 352 VQLEN-LRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 352 v~~~~-L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
+.... ..+..+..=+|-+...|||+ + ...+|+.+ +.|+|.-++++
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~~~l~~~-~--------~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAVECAHWF-D--------FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEESCGGGS-C--------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCccccccccCCCeeEEeHhhHHHHh-C--------HHHHHHHHHHhcCCCcEEEE
Confidence 22111 11122455566666789998 3 24555555 67899876654
No 75
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=79.37 E-value=2.4 Score=40.69 Aligned_cols=100 Identities=14% Similarity=0.142 Sum_probs=58.3
Q ss_pred EEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCccccc
Q 009376 275 HIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDVQL 354 (536)
Q Consensus 275 HIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~~ 354 (536)
+|+|+|.|.| +|--.++.+. |..+++|+|-+.. .++.+.++ |+..|+...+... ++..
T Consensus 52 ~VLDlGCG~G----plAl~l~~~~---p~a~~~A~Di~~~------~leiar~~----~~~~g~~~~v~~~-----d~~~ 109 (200)
T 3fzg_A 52 SILDFGCGFN----PLALYQWNEN---EKIIYHAYDIDRA------EIAFLSSI----IGKLKTTIKYRFL-----NKES 109 (200)
T ss_dssp EEEEETCTTH----HHHHHHHCSS---CCCEEEEECSCHH------HHHHHHHH----HHHSCCSSEEEEE-----CCHH
T ss_pred eEEEecCCCC----HHHHHHHhcC---CCCEEEEEeCCHH------HHHHHHHH----HHhcCCCccEEEe-----cccc
Confidence 7899987765 4444555443 5669999997642 35555544 5667887544331 1110
Q ss_pred cCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 009376 355 ENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVE 406 (536)
Q Consensus 355 ~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~PkvvtlvE 406 (536)
. .-++.+=+|=..-.||+|.+. +..+.+.++.|+|.-++|.=
T Consensus 110 ~---~~~~~~DvVLa~k~LHlL~~~-------~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 110 D---VYKGTYDVVFLLKMLPVLKQQ-------DVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp H---HTTSEEEEEEEETCHHHHHHT-------TCCHHHHHHTCEEEEEEEEE
T ss_pred c---CCCCCcChhhHhhHHHhhhhh-------HHHHHHHHHHhCCCCEEEEe
Confidence 1 122222222223478998332 23467899999999888763
No 76
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=79.32 E-value=12 Score=37.67 Aligned_cols=114 Identities=17% Similarity=0.074 Sum_probs=63.4
Q ss_pred cHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-
Q 009376 261 NGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP- 339 (536)
Q Consensus 261 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp- 339 (536)
..+|++.+...+.-+|+|+|.|.|. |...++.+. .-++|||+.+. .++.+ .+.++..|++
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s~-------~~~~a----~~~~~~~~l~~ 99 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAST-------MAQHA----EVLVKSNNLTD 99 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECST-------HHHHH----HHHHHHTTCTT
T ss_pred HHHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCHH-------HHHHH----HHHHHHcCCCC
Confidence 3577777765566689999998885 444555552 35999999752 13222 3334445653
Q ss_pred -EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 009376 340 -FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVE 406 (536)
Q Consensus 340 -FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~PkvvtlvE 406 (536)
.+|. ..+..++... ..=+.|+.+ ..++|+..+. ..+.+...-+-|+|.-+++.+
T Consensus 100 ~v~~~--~~d~~~~~~~----~~~D~Ivs~--~~~~~~~~~~-----~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 100 RIVVI--PGKVEEVSLP----EQVDIIISE--PMGYMLFNER-----MLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TEEEE--ESCTTTCCCS----SCEEEEEEC--CCBTTBTTTS-----HHHHHHHGGGGEEEEEEEESC
T ss_pred cEEEE--EcchhhCCCC----CceeEEEEe--CchhcCChHH-----HHHHHHHHHhhcCCCeEEEEe
Confidence 4443 3333332211 011233333 3467775432 244555556788999877643
No 77
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=78.38 E-value=7 Score=39.11 Aligned_cols=33 Identities=18% Similarity=0.275 Sum_probs=23.9
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDD 311 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~ 311 (536)
+.-+|+|+|.|.|. +...|+.+- |.+++|++|.
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~ 220 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDR 220 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeC
Confidence 44689999999985 444555442 4579999997
No 78
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=77.33 E-value=43 Score=30.51 Aligned_cols=21 Identities=14% Similarity=0.178 Sum_probs=16.9
Q ss_pred ccchhhHHHHHHhCCCccccC
Q 009376 472 HELLGKWRSRFTMAGFRPYPL 492 (536)
Q Consensus 472 hE~~~~Wr~r~~~AGF~~~pl 492 (536)
.-....|+..|+.+||+.+.+
T Consensus 165 ~~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 165 FFSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp CCCHHHHHHHHHHTTCEEEEE
T ss_pred cCCHHHHHHHHHHCCCeEEEE
Confidence 345688999999999987665
No 79
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=76.82 E-value=7.4 Score=35.44 Aligned_cols=39 Identities=15% Similarity=0.222 Sum_probs=25.2
Q ss_pred HHHHhccc-CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 263 AIAEAMKD-EDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 263 AILEA~~g-e~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.|++.+.. .+.-+|+|+|.|.|.- ...|+ .++||||.+.
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~----~~~l~--------~~v~~~D~s~ 96 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRL----ASSIR--------NPVHCFDLAS 96 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHH----HHHCC--------SCEEEEESSC
T ss_pred HHHHHHhccCCCCeEEEECCcCCHH----HHHhh--------ccEEEEeCCC
Confidence 35555542 2346899999998863 23332 4899999764
No 80
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=76.80 E-value=15 Score=37.05 Aligned_cols=103 Identities=18% Similarity=0.174 Sum_probs=56.8
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--EEEEEeecCC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--FEFHAANMSG 349 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~ 349 (536)
+.-.|+|+|.|.|. +...|+.+ +..+++|||.+. . ++.+ .+.++..|++ .+|.... .
T Consensus 66 ~~~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s~-~------l~~a----~~~~~~~~~~~~v~~~~~d--~ 124 (349)
T 3q7e_A 66 KDKVVLDVGSGTGI----LCMFAAKA----GARKVIGIECSS-I------SDYA----VKIVKANKLDHVVTIIKGK--V 124 (349)
T ss_dssp TTCEEEEESCTTSH----HHHHHHHT----TCSEEEEEECST-H------HHHH----HHHHHHTTCTTTEEEEESC--T
T ss_pred CCCEEEEEeccchH----HHHHHHHC----CCCEEEEECcHH-H------HHHH----HHHHHHcCCCCcEEEEECc--H
Confidence 33479999999984 44556665 246999999862 1 3333 3344556765 5654432 2
Q ss_pred ccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 350 YDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 350 ~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
.++... -..=++|+.++ ..+++..+ ...+.+|+.+ |-|+|.-+++.
T Consensus 125 ~~~~~~---~~~fD~Iis~~--~~~~l~~~-----~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 125 EEVELP---VEKVDIIISEW--MGYCLFYE-----SMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TTCCCS---SSCEEEEEECC--CBBTBTBT-----CCHHHHHHHHHHHEEEEEEEES
T ss_pred HHccCC---CCceEEEEEcc--ccccccCc-----hhHHHHHHHHHHhCCCCCEEcc
Confidence 222111 01112444443 22333222 2256788777 77999888764
No 81
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=76.62 E-value=19 Score=32.21 Aligned_cols=103 Identities=12% Similarity=0.088 Sum_probs=54.5
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCccc
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDV 352 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 352 (536)
.-+|+|+|.|.|.-...++ +. ++ .++||||.+.. .++.+.+++. ..+..++|.... ..+
T Consensus 24 ~~~vLDiGcG~G~~~~~~~---~~-~~----~~v~~vD~s~~------~~~~a~~~~~----~~~~~~~~~~~d--~~~- 82 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIF---VE-DG----YKTYGIEISDL------QLKKAENFSR----ENNFKLNISKGD--IRK- 82 (209)
T ss_dssp CSEEEEESCCSSSCTHHHH---HH-TT----CEEEEEECCHH------HHHHHHHHHH----HHTCCCCEEECC--TTS-
T ss_pred CCEEEEECCCCCHHHHHHH---Hh-CC----CEEEEEECCHH------HHHHHHHHHH----hcCCceEEEECc--hhh-
Confidence 3479999998876444333 22 22 48999997643 2444444433 234444443322 222
Q ss_pred cccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHH-HHhcCCcEEEEEe
Q 009376 353 QLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLML-VKRLSPKVVTLVE 406 (536)
Q Consensus 353 ~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~-VksL~PkvvtlvE 406 (536)
+...++..=+|-+...|||++. .+ ...+|+. .+.|+|.-++++.
T Consensus 83 ----~~~~~~~fD~v~~~~~l~~~~~-----~~-~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 83 ----LPFKDESMSFVYSYGTIFHMRK-----ND-VKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp ----CCSCTTCEEEEEECSCGGGSCH-----HH-HHHHHHHHHHHEEEEEEEEEE
T ss_pred ----CCCCCCceeEEEEcChHHhCCH-----HH-HHHHHHHHHHHcCCCcEEEEE
Confidence 2222333223334467888852 22 3445554 4778998766554
No 82
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=76.59 E-value=13 Score=36.21 Aligned_cols=114 Identities=15% Similarity=0.182 Sum_probs=58.8
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHh----cCCcEEEEEeec
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQ----FKVPFEFHAANM 347 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s----~gvpFeF~~V~~ 347 (536)
+.-+|+|+|.|.|.- ...|+.++ ..++||||.+.. .++...+++...... ....++|.. .
T Consensus 34 ~~~~VLDlGcG~G~~----~~~l~~~~----~~~v~gvD~s~~------~l~~a~~~~~~~~~~~~~~~~~~~~~~~--~ 97 (313)
T 3bgv_A 34 RDITVLDLGCGKGGD----LLKWKKGR----INKLVCTDIADV------SVKQCQQRYEDMKNRRDSEYIFSAEFIT--A 97 (313)
T ss_dssp -CCEEEEETCTTTTT----HHHHHHTT----CSEEEEEESCHH------HHHHHHHHHHHHHSSSCC-CCCEEEEEE--C
T ss_pred CCCEEEEECCCCcHH----HHHHHhcC----CCEEEEEeCCHH------HHHHHHHHHHHhhhcccccccceEEEEE--e
Confidence 456899999998873 33444432 358999997642 355565555433210 111344433 3
Q ss_pred CCccccc-cCccccCCceEEEeeccccCCC-CCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 348 SGYDVQL-ENLRVQPGEAVAVNFAFMLHHV-PDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 348 ~~~ev~~-~~L~i~~gEaLaVN~~~~LH~l-~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
+..++.. +.+.-.++..=+|-|.+.||++ .+. .....+|+.+ +.|+|.-++++.
T Consensus 98 D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~-----~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 98 DSSKELLIDKFRDPQMCFDICSCQFVCHYSFESY-----EQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp CTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSH-----HHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccccchhhhcccCCCCEEEEEEecchhhccCCH-----HHHHHHHHHHHHHhCCCcEEEEe
Confidence 3222210 0111112233344455688887 321 1234566666 678998776553
No 83
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=76.50 E-value=5.1 Score=40.35 Aligned_cols=133 Identities=14% Similarity=0.163 Sum_probs=73.8
Q ss_pred HHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEE
Q 009376 264 IAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFH 343 (536)
Q Consensus 264 ILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~ 343 (536)
|++.+.. --.|+|+|.|.|. |--.++. .+|..+++++|-+.. .++.+.+ ++...|+++.|.
T Consensus 126 i~~~i~~--p~~VLDLGCG~Gp----LAl~~~~---~~p~a~y~a~DId~~------~le~a~~----~l~~~g~~~~~~ 186 (281)
T 3lcv_B 126 LFRHLPR--PNTLRDLACGLNP----LAAPWMG---LPAETVYIASDIDAR------LVGFVDE----ALTRLNVPHRTN 186 (281)
T ss_dssp HGGGSCC--CSEEEETTCTTGG----GCCTTTT---CCTTCEEEEEESBHH------HHHHHHH----HHHHTTCCEEEE
T ss_pred HHhccCC--CceeeeeccCccH----HHHHHHh---hCCCCEEEEEeCCHH------HHHHHHH----HHHhcCCCceEE
Confidence 4444433 3378999887763 2222222 247899999997642 3544444 556679998885
Q ss_pred EeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEEecCCCCCCCCchHHHHHH
Q 009376 344 AANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVEQESNTNTAAFYPRFLEA 423 (536)
Q Consensus 344 ~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~PkvvtlvEqEan~N~~~F~~RF~Ea 423 (536)
....... . .-.+++++.+| ..+|||.++. +...++.+..|+|..|++.=.- .+...|=..-
T Consensus 187 v~D~~~~-----~-p~~~~DvaL~l--kti~~Le~q~------kg~g~~ll~aL~~~~vvVSfp~-----ksl~Grs~gm 247 (281)
T 3lcv_B 187 VADLLED-----R-LDEPADVTLLL--KTLPCLETQQ------RGSGWEVIDIVNSPNIVVTFPT-----KSLGQRSKGM 247 (281)
T ss_dssp ECCTTTS-----C-CCSCCSEEEET--TCHHHHHHHS------TTHHHHHHHHSSCSEEEEEEEC-----C-------CH
T ss_pred Eeeeccc-----C-CCCCcchHHHH--HHHHHhhhhh------hHHHHHHHHHhCCCCEEEeccc-----hhhcCCCcch
Confidence 5433221 1 12234555555 4788886532 3356699999999988864221 1111122223
Q ss_pred HHHHHHHHHhh
Q 009376 424 LNYYTAMFESI 434 (536)
Q Consensus 424 L~yYsAlFDSL 434 (536)
-..|+..|+..
T Consensus 248 ~~~Y~~~~e~~ 258 (281)
T 3lcv_B 248 FQNYSQSFESQ 258 (281)
T ss_dssp HHHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 34666777654
No 84
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=74.47 E-value=21 Score=32.10 Aligned_cols=106 Identities=18% Similarity=0.183 Sum_probs=58.7
Q ss_pred cHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcE
Q 009376 261 NGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPF 340 (536)
Q Consensus 261 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpF 340 (536)
...|++.+. .+.-+|+|+|.|.|. +...|+.+ + .++||||.+.. ..+.|+....
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G~----~~~~l~~~-~----~~~~~~D~~~~--------------~~~~~~~~~~-- 75 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSGA----LGAAIKEN-G----TRVSGIEAFPE--------------AAEQAKEKLD-- 75 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTSH----HHHHHHTT-T----CEEEEEESSHH--------------HHHHHHTTSS--
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCCH----HHHHHHhc-C----CeEEEEeCCHH--------------HHHHHHHhCC--
Confidence 456666665 456689999998883 45566666 2 58999997642 2233443322
Q ss_pred EEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
+|.. .+..+. .+...++..=+|-+...|||+++ + ..+|+.+ +.|+|.-.+++
T Consensus 76 ~~~~--~d~~~~---~~~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 76 HVVL--GDIETM---DMPYEEEQFDCVIFGDVLEHLFD-------P-WAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp EEEE--SCTTTC---CCCSCTTCEEEEEEESCGGGSSC-------H-HHHHHHTGGGEEEEEEEEE
T ss_pred cEEE--cchhhc---CCCCCCCccCEEEECChhhhcCC-------H-HHHHHHHHHHcCCCCEEEE
Confidence 3322 222111 11222233223334567889864 2 3566665 56788755544
No 85
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=74.21 E-value=22 Score=34.19 Aligned_cols=46 Identities=15% Similarity=0.263 Sum_probs=30.1
Q ss_pred hhcHHHHHhccc----CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 259 SANGAIAEAMKD----EDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 259 tANqAILEA~~g----e~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
..|..+.+.+.. .+.-.|+|+|.|.|. +...||.+ | .++||||.+.
T Consensus 51 ~~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~----~~~~La~~--G---~~V~gvD~S~ 100 (252)
T 2gb4_A 51 QGHQLLKKHLDTFLKGQSGLRVFFPLCGKAI----EMKWFADR--G---HTVVGVEISE 100 (252)
T ss_dssp TCCHHHHHHHHHHHTTCCSCEEEETTCTTCT----HHHHHHHT--T---CEEEEECSCH
T ss_pred CCCHHHHHHHHHhccCCCCCeEEEeCCCCcH----HHHHHHHC--C---CeEEEEECCH
Confidence 345555544432 345689999999884 34557766 3 3899999875
No 86
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=74.09 E-value=34 Score=31.44 Aligned_cols=99 Identities=16% Similarity=0.097 Sum_probs=54.4
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcC--CcEEEEEeecCCcc
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFK--VPFEFHAANMSGYD 351 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g--vpFeF~~V~~~~~e 351 (536)
-.|+|+|.|.|. +...|+. +..++||||.+.. .++.+.+++. ..+ -.++|.... ..+
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~~------~~~~a~~~~~----~~~~~~~v~~~~~d--~~~ 126 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----PERFVVGLDISES------ALAKANETYG----SSPKAEYFSFVKED--VFT 126 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----TTEEEEEECSCHH------HHHHHHHHHT----TSGGGGGEEEECCC--TTT
T ss_pred CCEEEeCCCCCH----HHHHHHh-----CCCeEEEEECCHH------HHHHHHHHhh----ccCCCcceEEEECc--hhc
Confidence 499999999884 3335554 3468999997642 2444444332 222 224443322 222
Q ss_pred ccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHH-hcCCcEEEEE
Q 009376 352 VQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVK-RLSPKVVTLV 405 (536)
Q Consensus 352 v~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~Vk-sL~Pkvvtlv 405 (536)
+.+ ++..=+|-+...|||++++ .+..+|+.++ .|+|.-.+++
T Consensus 127 ~~~------~~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 127 WRP------TELFDLIFDYVFFCAIEPE------MRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp CCC------SSCEEEEEEESSTTTSCGG------GHHHHHHHHHHHEEEEEEEEE
T ss_pred CCC------CCCeeEEEEChhhhcCCHH------HHHHHHHHHHHHCCCCcEEEE
Confidence 111 1122233355678998642 2456676664 5899877654
No 87
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=73.77 E-value=17 Score=32.44 Aligned_cols=109 Identities=12% Similarity=0.150 Sum_probs=58.6
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC-cEEEEEeecCCccc
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV-PFEFHAANMSGYDV 352 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-pFeF~~V~~~~~ev 352 (536)
-.|+|+|.|.|.-= ..++.+. .-++||||.+.. .++.+.++ ++..|+ ..+|... +..++
T Consensus 46 ~~vLDlgcG~G~~~----~~~~~~~----~~~v~~vD~~~~------~~~~a~~~----~~~~~~~~v~~~~~--d~~~~ 105 (189)
T 3p9n_A 46 LAVLDLYAGSGALG----LEALSRG----AASVLFVESDQR------SAAVIARN----IEALGLSGATLRRG--AVAAV 105 (189)
T ss_dssp CEEEEETCTTCHHH----HHHHHTT----CSEEEEEECCHH------HHHHHHHH----HHHHTCSCEEEEES--CHHHH
T ss_pred CEEEEeCCCcCHHH----HHHHHCC----CCeEEEEECCHH------HHHHHHHH----HHHcCCCceEEEEc--cHHHH
Confidence 46899999888422 2233342 348999997642 24444443 334455 3444332 22221
Q ss_pred cccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHh---cCCcEEEEEecCCCCC
Q 009376 353 QLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKR---LSPKVVTLVEQESNTN 412 (536)
Q Consensus 353 ~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~Vks---L~PkvvtlvEqEan~N 412 (536)
.. .+.-..=+.|+.|.++ |+.. ...+.+|..++. |+|.-++++|.+....
T Consensus 106 ~~-~~~~~~fD~i~~~~p~--~~~~-------~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 106 VA-AGTTSPVDLVLADPPY--NVDS-------ADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HH-HCCSSCCSEEEECCCT--TSCH-------HHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred Hh-hccCCCccEEEECCCC--Ccch-------hhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 10 0111122467777653 3321 234567777765 9999999888665443
No 88
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=73.56 E-value=49 Score=29.40 Aligned_cols=98 Identities=23% Similarity=0.313 Sum_probs=51.0
Q ss_pred EEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCccccc
Q 009376 275 HIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDVQL 354 (536)
Q Consensus 275 HIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~~ 354 (536)
.|+|+|.|.|. +...|+.+ | .++||||.+.. .++.+.+++ +..|+.++|..... .++.
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~--~---~~v~~vD~s~~------~~~~a~~~~----~~~~~~~~~~~~d~--~~~~- 89 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL--G---YEVTAVDQSSV------GLAKAKQLA----QEKGVKITTVQSNL--ADFD- 89 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT--T---CEEEEECSSHH------HHHHHHHHH----HHHTCCEEEECCBT--TTBS-
T ss_pred CEEEECCCCCH----hHHHHHhC--C---CeEEEEECCHH------HHHHHHHHH----HhcCCceEEEEcCh--hhcC-
Confidence 89999998875 34556655 2 38999997642 244444433 33355555543322 2211
Q ss_pred cCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 355 ENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 355 ~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
+.-..=+.|+.+ +.|+.. .+ ...+|+.+ +.|+|.-++++.
T Consensus 90 --~~~~~fD~v~~~----~~~~~~-----~~-~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 90 --IVADAWEGIVSI----FCHLPS-----SL-RQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp --CCTTTCSEEEEE----CCCCCH-----HH-HHHHHHHHHTTCCSSEEEEEE
T ss_pred --CCcCCccEEEEE----hhcCCH-----HH-HHHHHHHHHHhcCCCcEEEEE
Confidence 111111344432 234421 12 34555555 678998776554
No 89
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=73.25 E-value=11 Score=34.68 Aligned_cols=33 Identities=12% Similarity=0.233 Sum_probs=23.1
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
+.-+|+|+|.|.|.- ...||.+ | .++||||.+.
T Consensus 22 ~~~~vLD~GCG~G~~----~~~la~~--g---~~V~gvD~S~ 54 (203)
T 1pjz_A 22 PGARVLVPLCGKSQD----MSWLSGQ--G---YHVVGAELSE 54 (203)
T ss_dssp TTCEEEETTTCCSHH----HHHHHHH--C---CEEEEEEECH
T ss_pred CCCEEEEeCCCCcHh----HHHHHHC--C---CeEEEEeCCH
Confidence 345799999988843 3345555 2 3899999875
No 90
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=73.10 E-value=32 Score=29.91 Aligned_cols=112 Identities=13% Similarity=0.111 Sum_probs=60.7
Q ss_pred cHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-
Q 009376 261 NGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP- 339 (536)
Q Consensus 261 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp- 339 (536)
.+.+++.+.-.+.-+|+|+|.|.|. +...|+.+ ..++||||.+.. .++...++ ++..+++
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-----~~~v~~~D~~~~------~~~~a~~~----~~~~~~~~ 101 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGV----IGIALADE-----VKSTTMADINRR------AIKLAKEN----IKLNNLDN 101 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-----SSEEEEEESCHH------HHHHHHHH----HHHTTCTT
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-----CCeEEEEECCHH------HHHHHHHH----HHHcCCCc
Confidence 3556677665566789999999884 34455555 248999997642 24433333 3445665
Q ss_pred --EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 340 --FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 340 --FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
++|..... .+. +.-..=+.|+.|.+ +|+- ......+|+.+ +.|+|.-++++.
T Consensus 102 ~~~~~~~~d~--~~~----~~~~~~D~v~~~~~--~~~~-------~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 102 YDIRVVHSDL--YEN----VKDRKYNKIITNPP--IRAG-------KEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp SCEEEEECST--TTT----CTTSCEEEEEECCC--STTC-------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEEECch--hcc----cccCCceEEEECCC--cccc-------hhHHHHHHHHHHHHcCCCCEEEEE
Confidence 66644322 211 11111135555543 3431 12234555554 678998766554
No 91
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=72.42 E-value=6 Score=39.27 Aligned_cols=99 Identities=16% Similarity=0.220 Sum_probs=61.9
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCcccc
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDVQ 353 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~ 353 (536)
-.|+|+|.|.|. | +++.+ |..+++|+|-+.. +-+.+.+++...|+++.|.........
T Consensus 107 ~~VLDlGCG~gp----L--al~~~----~~~~y~a~DId~~----------~i~~ar~~~~~~g~~~~~~v~D~~~~~-- 164 (253)
T 3frh_A 107 RRVLDIACGLNP----L--ALYER----GIASVWGCDIHQG----------LGDVITPFAREKDWDFTFALQDVLCAP-- 164 (253)
T ss_dssp SEEEEETCTTTH----H--HHHHT----TCSEEEEEESBHH----------HHHHHHHHHHHTTCEEEEEECCTTTSC--
T ss_pred CeEEEecCCccH----H--HHHhc----cCCeEEEEeCCHH----------HHHHHHHHHHhcCCCceEEEeecccCC--
Confidence 389999997762 1 12222 6789999997542 334445556777999988765433221
Q ss_pred ccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 009376 354 LENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVE 406 (536)
Q Consensus 354 ~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~PkvvtlvE 406 (536)
+. .+.+++.++ ..+|||.++. +...++.+..|+|..|++.=
T Consensus 165 ---~~-~~~DvvLll--k~lh~LE~q~------~~~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 165 ---PA-EAGDLALIF--KLLPLLEREQ------AGSAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp ---CC-CBCSEEEEE--SCHHHHHHHS------TTHHHHHHHHCBCSEEEEEE
T ss_pred ---CC-CCcchHHHH--HHHHHhhhhc------hhhHHHHHHHhcCCCEEEEc
Confidence 11 145555555 3678885432 34566888899988887653
No 92
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=70.26 E-value=34 Score=29.45 Aligned_cols=102 Identities=9% Similarity=0.092 Sum_probs=54.7
Q ss_pred HHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC-cEEE
Q 009376 264 IAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV-PFEF 342 (536)
Q Consensus 264 ILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-pFeF 342 (536)
|++.+.-.+.-+|+|+|.|.|. +...|+. +..++||||.+.. .++.+.++ ++..|+ .++|
T Consensus 27 ~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~~~~------~~~~a~~~----~~~~~~~~~~~ 87 (183)
T 2yxd_A 27 SIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDYLDG------AIEVTKQN----LAKFNIKNCQI 87 (183)
T ss_dssp HHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEECSHH------HHHHHHHH----HHHTTCCSEEE
T ss_pred HHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeCCHH------HHHHHHHH----HHHcCCCcEEE
Confidence 3444433344589999999987 3344444 3569999997642 24433333 344565 3555
Q ss_pred EEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEE
Q 009376 343 HAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLV 405 (536)
Q Consensus 343 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~Pkvvtlv 405 (536)
... +..+ .+.-..=+.++.+.+ .....+|+.++.+ |.-.+++
T Consensus 88 ~~~--d~~~----~~~~~~~D~i~~~~~--------------~~~~~~l~~~~~~-~gG~l~~ 129 (183)
T 2yxd_A 88 IKG--RAED----VLDKLEFNKAFIGGT--------------KNIEKIIEILDKK-KINHIVA 129 (183)
T ss_dssp EES--CHHH----HGGGCCCSEEEECSC--------------SCHHHHHHHHHHT-TCCEEEE
T ss_pred EEC--Cccc----cccCCCCcEEEECCc--------------ccHHHHHHHHhhC-CCCEEEE
Confidence 332 2111 011012244555543 1246789999988 8655444
No 93
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=70.15 E-value=14 Score=39.49 Aligned_cols=120 Identities=12% Similarity=0.065 Sum_probs=64.1
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHH---HHHHhcCC
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLS---KLAEQFKV 338 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~---~fA~s~gv 338 (536)
..|++.+.-...=+|+|+|.|.|. +.-.+|.+.+ .-+++||+-+.. .++.+.+.+. +.++..|+
T Consensus 163 ~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g---~~kVvGIDiS~~------~lelAr~n~e~frkr~~~~Gl 229 (438)
T 3uwp_A 163 AQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN---CKHHYGVEKADI------PAKYAETMDREFRKWMKWYGK 229 (438)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC---CSEEEEEECCHH------HHHHHHHHHHHHHHHHHHHTB
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC---CCEEEEEeCCHH------HHHHHHHHHHHHHHHHHHhCC
Confidence 345555554445579999998885 2223333322 238999997642 1333333332 33556676
Q ss_pred c-EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEE
Q 009376 339 P-FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLV 405 (536)
Q Consensus 339 p-FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~Pkvvtlv 405 (536)
. -.+.-+..+..++.... .+..=.+|++|..+ + . ++.+..|..+.+.|+|.-.+++
T Consensus 230 ~~~rVefi~GD~~~lp~~d-~~~~aDVVf~Nn~~--F-~-------pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 230 KHAEYTLERGDFLSEEWRE-RIANTSVIFVNNFA--F-G-------PEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp CCCEEEEEECCTTSHHHHH-HHHTCSEEEECCTT--C-C-------HHHHHHHHHHHTTSCTTCEEEE
T ss_pred CCCCeEEEECcccCCcccc-ccCCccEEEEcccc--c-C-------chHHHHHHHHHHcCCCCcEEEE
Confidence 2 23333333333322111 11233567777643 2 1 2456677778899999877655
No 94
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=70.05 E-value=5.5 Score=39.22 Aligned_cols=43 Identities=16% Similarity=-0.041 Sum_probs=29.8
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
..|++.+.-.+.-+|+|+|.|.|. +...||.+ + -++||||.+.
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~-g----~~V~gvD~S~ 77 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER-G----ASVTVFDFSQ 77 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT-T----CEEEEEESCH
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc-C----CEEEEEECCH
Confidence 345666655556689999999886 44556655 2 3899999764
No 95
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=70.02 E-value=21 Score=35.79 Aligned_cols=111 Identities=18% Similarity=0.129 Sum_probs=59.3
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC--c
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV--P 339 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--p 339 (536)
.+|.+.+.-.+.-.|+|+|.|.|. +...|+.+ | ..+++|||.+. .++.+.++ ++..|+ .
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~--g--~~~v~gvD~s~-------~~~~a~~~----~~~~~~~~~ 114 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA--G--AKKVLGVDQSE-------ILYQAMDI----IRLNKLEDT 114 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT--T--CSEEEEEESST-------HHHHHHHH----HHHTTCTTT
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc--C--CCEEEEEChHH-------HHHHHHHH----HHHcCCCCc
Confidence 456665544445589999999984 34455555 2 25899999762 14444333 334454 3
Q ss_pred EEEEEeecCCccccccCccccCCceEEEee-ccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEE
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNF-AFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTL 404 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~-~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtl 404 (536)
.+|. ..+..++... ...=++|+.|. .+.|++. ...+.+|+.+ +-|+|.-+++
T Consensus 115 i~~~--~~d~~~~~~~---~~~~D~Ivs~~~~~~l~~~--------~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 115 ITLI--KGKIEEVHLP---VEKVDVIISEWMGYFLLFE--------SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEE--ESCTTTSCCS---CSCEEEEEECCCBTTBTTT--------CHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEE--EeeHHHhcCC---CCcEEEEEEcCchhhccCH--------HHHHHHHHHHHhhcCCCcEEE
Confidence 4443 3333332111 01113455554 2334432 2245677766 6789987765
No 96
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=69.99 E-value=24 Score=31.67 Aligned_cols=46 Identities=30% Similarity=0.505 Sum_probs=34.0
Q ss_pred hhcHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 259 SANGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 259 tANqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.....|++.+.....-+|+|+|.|.|. +...|+.+ | .++||||.+.
T Consensus 39 ~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s~ 84 (227)
T 3e8s_A 39 VTDQAILLAILGRQPERVLDLGCGEGW----LLRALADR--G---IEAVGVDGDR 84 (227)
T ss_dssp THHHHHHHHHHHTCCSEEEEETCTTCH----HHHHHHTT--T---CEEEEEESCH
T ss_pred cccHHHHHHhhcCCCCEEEEeCCCCCH----HHHHHHHC--C---CEEEEEcCCH
Confidence 345677788776666899999999984 45666666 2 3899999763
No 97
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=69.79 E-value=47 Score=30.17 Aligned_cols=99 Identities=18% Similarity=0.191 Sum_probs=53.3
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCcc
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYD 351 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~e 351 (536)
+.-.|+|+|.|.|.--..|.+ + ++ ++||||.+.. .++...+++ -..+|.... ..+
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~----~--~~---~v~~~D~s~~------~~~~a~~~~--------~~~~~~~~d--~~~ 94 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTK----E--FG---DTAGLELSED------MLTHARKRL--------PDATLHQGD--MRD 94 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHH----H--HS---EEEEEESCHH------HHHHHHHHC--------TTCEEEECC--TTT
T ss_pred CCCeEEEecccCCHHHHHHHH----h--CC---cEEEEeCCHH------HHHHHHHhC--------CCCEEEECC--HHH
Confidence 446899999999864433333 3 22 8999997642 233333321 123443322 111
Q ss_pred ccccCccccCCce-EEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 352 VQLENLRVQPGEA-VAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 352 v~~~~L~i~~gEa-LaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
+ .. ++.. +|+.+.-.+||+++. .....+|+.+ +.|+|.-.++++
T Consensus 95 ~-----~~-~~~~D~v~~~~~~~~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 95 F-----RL-GRKFSAVVSMFSSVGYLKTT-----EELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp C-----CC-SSCEEEEEECTTGGGGCCSH-----HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c-----cc-CCCCcEEEEcCchHhhcCCH-----HHHHHHHHHHHHhcCCCeEEEEE
Confidence 1 12 2222 444333378888642 2234566655 678999888775
No 98
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=68.64 E-value=25 Score=32.93 Aligned_cols=98 Identities=21% Similarity=0.266 Sum_probs=55.8
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCccc
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDV 352 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 352 (536)
.-.|+|+|.|.|. +...|+.+ |+ ++||||.+.. .++.+.+++. ..+|... +..+
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~------~~~~a~~~~~--------~~~~~~~--d~~~- 104 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADS--FG---TVEGLELSAD------MLAIARRRNP--------DAVLHHG--DMRD- 104 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTT--SS---EEEEEESCHH------HHHHHHHHCT--------TSEEEEC--CTTT-
T ss_pred CCcEEEeCCcCCH----HHHHHHHc--CC---eEEEEECCHH------HHHHHHhhCC--------CCEEEEC--ChHH-
Confidence 3579999999884 45566665 32 8999997642 2333333221 2334322 2222
Q ss_pred cccCccccCCceEEEeecc-ccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 353 QLENLRVQPGEAVAVNFAF-MLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 353 ~~~~L~i~~gEaLaVN~~~-~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
+.. ++..=+|-|.+ .|||+++. .....+|+.+ +.|+|.-+++++
T Consensus 105 ----~~~-~~~fD~v~~~~~~l~~~~~~-----~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 105 ----FSL-GRRFSAVTCMFSSIGHLAGQ-----AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp ----CCC-SCCEEEEEECTTGGGGSCHH-----HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred ----CCc-cCCcCEEEEcCchhhhcCCH-----HHHHHHHHHHHHhcCCCcEEEEE
Confidence 111 34333444555 88998641 2244566655 678999888886
No 99
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=66.48 E-value=44 Score=33.19 Aligned_cols=111 Identities=20% Similarity=0.132 Sum_probs=57.0
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--E
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--F 340 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--F 340 (536)
+|++...-.+.-+|+|+|.|.|. |...++.+. .-+++||+.+ . .++.+. +.++..|++ .
T Consensus 29 ai~~~~~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~v~~vD~s-~------~~~~a~----~~~~~~~~~~~i 89 (328)
T 1g6q_1 29 AIIQNKDLFKDKIVLDVGCGTGI----LSMFAAKHG----AKHVIGVDMS-S------IIEMAK----ELVELNGFSDKI 89 (328)
T ss_dssp HHHHHHHHHTTCEEEEETCTTSH----HHHHHHHTC----CSEEEEEESS-T------HHHHHH----HHHHHTTCTTTE
T ss_pred HHHhhHhhcCCCEEEEecCccHH----HHHHHHHCC----CCEEEEEChH-H------HHHHHH----HHHHHcCCCCCE
Confidence 44444433344589999999985 334455542 2489999976 2 133333 334445653 4
Q ss_pred EEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEE
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTL 404 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtl 404 (536)
+|. ..+..++... ...=++|+.+. ..+++..+. ..+.+|+.+ +-|+|.-+++
T Consensus 90 ~~~--~~d~~~~~~~---~~~~D~Ivs~~--~~~~l~~~~-----~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 90 TLL--RGKLEDVHLP---FPKVDIIISEW--MGYFLLYES-----MMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp EEE--ESCTTTSCCS---SSCEEEEEECC--CBTTBSTTC-----CHHHHHHHHHHHEEEEEEEE
T ss_pred EEE--ECchhhccCC---CCcccEEEEeC--chhhcccHH-----HHHHHHHHHHhhcCCCeEEE
Confidence 443 3333332211 01113444443 233343321 245677666 6789987766
No 100
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=65.46 E-value=16 Score=33.71 Aligned_cols=106 Identities=13% Similarity=0.091 Sum_probs=54.2
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--EEEEEeecCC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--FEFHAANMSG 349 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~ 349 (536)
+.-+|+|+|.+.|.-=.. ||.+- ++.-+||+|+.+.. .++.+.++ ++..|+. ++|..- +.
T Consensus 58 ~~~~vLdiG~G~G~~~~~----la~~~--~~~~~v~~vD~~~~------~~~~a~~~----~~~~~~~~~v~~~~~--d~ 119 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVR----MARLL--QPGARLLTMEINPD------CAAITQQM----LNFAGLQDKVTILNG--AS 119 (221)
T ss_dssp CCSEEEEECCTTSHHHHH----HHTTS--CTTCEEEEEESCHH------HHHHHHHH----HHHHTCGGGEEEEES--CH
T ss_pred CCCEEEEECCCCCHHHHH----HHHhC--CCCCEEEEEeCChH------HHHHHHHH----HHHcCCCCceEEEEC--CH
Confidence 345899999988864333 33321 23469999997642 24444333 3445664 555432 22
Q ss_pred ccccccCcc----ccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 009376 350 YDVQLENLR----VQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVE 406 (536)
Q Consensus 350 ~ev~~~~L~----i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~PkvvtlvE 406 (536)
.++ +..+. ..+=+.|.++.. .|+.. +...++..++-|+|.-+++++
T Consensus 120 ~~~-l~~~~~~~~~~~fD~V~~d~~--~~~~~--------~~~~~~~~~~~LkpgG~lv~~ 169 (221)
T 3u81_A 120 QDL-IPQLKKKYDVDTLDMVFLDHW--KDRYL--------PDTLLLEKCGLLRKGTVLLAD 169 (221)
T ss_dssp HHH-GGGTTTTSCCCCCSEEEECSC--GGGHH--------HHHHHHHHTTCCCTTCEEEES
T ss_pred HHH-HHHHHHhcCCCceEEEEEcCC--cccch--------HHHHHHHhccccCCCeEEEEe
Confidence 111 01111 112235555431 22221 122456555899999988885
No 101
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=65.04 E-value=16 Score=39.02 Aligned_cols=113 Identities=17% Similarity=0.090 Sum_probs=62.9
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-- 339 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 339 (536)
.+|++.+...+.-+|+|+|.|.|. +...|+.+ +..++|||+.+. . ++ ...+.++..|+.
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~----~~~~V~gvD~s~-~------l~----~A~~~~~~~gl~~~ 208 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQA----GARKIYAVEAST-M------AQ----HAEVLVKSNNLTDR 208 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHT----TCSEEEEEECHH-H------HH----HHHHHHHHTTCTTT
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHc----CCCEEEEEEcHH-H------HH----HHHHHHHHcCCCCc
Confidence 456666655555689999999886 44456654 245999999642 1 32 233344556764
Q ss_pred EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVE 406 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~PkvvtlvE 406 (536)
.+|.. .+..++... ..=+.|+.| ..++|+.++ ...+.+....+-|+|.-+++.+
T Consensus 209 v~~~~--~d~~~~~~~----~~fD~Ivs~--~~~~~~~~e-----~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 209 IVVIP--GKVEEVSLP----EQVDIIISE--PMGYMLFNE-----RMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp EEEEE--SCTTTCCCS----SCEEEEECC--CCHHHHTCH-----HHHHHHHHGGGGEEEEEEEESC
T ss_pred EEEEE--CchhhCccC----CCeEEEEEe--CchHhcCcH-----HHHHHHHHHHHhcCCCCEEEEE
Confidence 55543 333332111 111334433 334555442 2345555556788999887754
No 102
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=63.86 E-value=58 Score=28.88 Aligned_cols=110 Identities=19% Similarity=0.229 Sum_probs=52.7
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC--cEEEEEeecCCcc
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV--PFEFHAANMSGYD 351 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--pFeF~~V~~~~~e 351 (536)
-.|+|+|.|.|.- ...|+.+-+ |.-++||||.+.. .++.+.++ ++..|+ .++|.. .+..+
T Consensus 24 ~~vLDlGcG~G~~----~~~l~~~~~--~~~~v~~vD~s~~------~~~~a~~~----~~~~~~~~~v~~~~--~d~~~ 85 (197)
T 3eey_A 24 DTVVDATCGNGND----TAFLASLVG--ENGRVFGFDIQDK------AIANTTKK----LTDLNLIDRVTLIK--DGHQN 85 (197)
T ss_dssp CEEEESCCTTSHH----HHHHHHHHC--TTCEEEEECSCHH------HHHHHHHH----HHHTTCGGGEEEEC--SCGGG
T ss_pred CEEEEcCCCCCHH----HHHHHHHhC--CCCEEEEEECCHH------HHHHHHHH----HHHcCCCCCeEEEE--CCHHH
Confidence 3799999999843 333443311 2239999997642 24444443 344566 355533 22222
Q ss_pred ccccCccccCCceEEEeeccccCCCCCCCcc--ccchHHHHHHHHHhcCCcEEEEE
Q 009376 352 VQLENLRVQPGEAVAVNFAFMLHHVPDESVS--TENYRDRLLMLVKRLSPKVVTLV 405 (536)
Q Consensus 352 v~~~~L~i~~gEaLaVN~~~~LH~l~desv~--~~n~rd~~L~~VksL~Pkvvtlv 405 (536)
+.. .+. ..=+.|+.|..+ +.+ .+..+. .......+-...+-|+|.-.+++
T Consensus 86 ~~~-~~~-~~fD~v~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 86 MDK-YID-CPVKAVMFNLGY-LPS-GDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp GGG-TCC-SCEEEEEEEESB-CTT-SCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred Hhh-hcc-CCceEEEEcCCc-ccC-cccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 210 011 122466777655 111 111111 11223434444567899766544
No 103
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=63.58 E-value=35 Score=32.97 Aligned_cols=91 Identities=16% Similarity=0.191 Sum_probs=51.1
Q ss_pred EEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCccccc
Q 009376 275 HIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDVQL 354 (536)
Q Consensus 275 HIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~~ 354 (536)
.|+|+|.|.|. +...|+.+ | -++||||.+.. .+ +.|+.. -.++|.. .+.
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~--~---~~v~gvD~s~~------ml--------~~a~~~-~~v~~~~--~~~----- 90 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEF--F---ERVHAVDPGEA------QI--------RQALRH-PRVTYAV--APA----- 90 (257)
T ss_dssp EEEEESCTTTT----THHHHHTT--C---SEEEEEESCHH------HH--------HTCCCC-TTEEEEE--CCT-----
T ss_pred CEEEEcCCCCH----HHHHHHHh--C---CEEEEEeCcHH------hh--------hhhhhc-CCceeeh--hhh-----
Confidence 58999999884 33456655 2 37999997642 11 223322 1234433 222
Q ss_pred cCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 355 ENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 355 ~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
+.+.+.++..=+|-|...||++. .+.+|+.+ |-|+|.-++++
T Consensus 91 e~~~~~~~sfD~v~~~~~~h~~~---------~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 91 EDTGLPPASVDVAIAAQAMHWFD---------LDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp TCCCCCSSCEEEEEECSCCTTCC---------HHHHHHHHHHHEEEEEEEEE
T ss_pred hhhcccCCcccEEEEeeehhHhh---------HHHHHHHHHHHcCCCCEEEE
Confidence 23344455554556667888873 23455554 67899876643
No 104
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=63.26 E-value=71 Score=27.47 Aligned_cols=44 Identities=16% Similarity=0.181 Sum_probs=30.0
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.+++.+.-...-+|+|+|.|.|. +...|+.+- |..++||||.+.
T Consensus 16 ~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~---~~~~v~~vD~~~ 59 (178)
T 3hm2_A 16 LAISALAPKPHETLWDIGGGSGS----IAIEWLRST---PQTTAVCFEISE 59 (178)
T ss_dssp HHHHHHCCCTTEEEEEESTTTTH----HHHHHHTTS---SSEEEEEECSCH
T ss_pred HHHHHhcccCCCeEEEeCCCCCH----HHHHHHHHC---CCCeEEEEeCCH
Confidence 34555554556689999998873 444555553 568999999764
No 105
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=62.69 E-value=22 Score=32.98 Aligned_cols=103 Identities=14% Similarity=0.150 Sum_probs=55.2
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhc-CCcEEEEEeecCCc
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQF-KVPFEFHAANMSGY 350 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~-gvpFeF~~V~~~~~ 350 (536)
+.-.|+|+|.|.|. +...|+.+- ..++||||.+.. .++.+.+++ +.. +...+|.... ..
T Consensus 79 ~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~s~~------~~~~a~~~~----~~~~~~~~~~~~~d--~~ 138 (241)
T 2ex4_A 79 GTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDITED------FLVQAKTYL----GEEGKRVRNYFCCG--LQ 138 (241)
T ss_dssp CCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEESCHH------HHHHHHHHT----GGGGGGEEEEEECC--GG
T ss_pred CCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeCCHH------HHHHHHHHh----hhcCCceEEEEEcC--hh
Confidence 35689999998885 344555543 248999997642 244443333 222 2234444322 22
Q ss_pred cccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 009376 351 DVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLV 405 (536)
Q Consensus 351 ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtlv 405 (536)
+ +....+..=+|-+...|||+++. .+..+|+.+ +.|+|.-++++
T Consensus 139 ~-----~~~~~~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 139 D-----FTPEPDSYDVIWIQWVIGHLTDQ------HLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp G-----CCCCSSCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEE
T ss_pred h-----cCCCCCCEEEEEEcchhhhCCHH------HHHHHHHHHHHhcCCCeEEEE
Confidence 2 12222322233344678998652 234566555 67899866544
No 106
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=61.34 E-value=90 Score=27.82 Aligned_cols=93 Identities=14% Similarity=0.131 Sum_probs=50.2
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCcc
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYD 351 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~e 351 (536)
+.-+|+|+|.|.|. +...|+.+ |+ -++||||.+.. .++.+.+ -++..|+..+|.. .+..+
T Consensus 49 ~~~~vlD~g~G~G~----~~~~l~~~--~~--~~v~~vD~~~~------~~~~a~~----~~~~~~~~~~~~~--~d~~~ 108 (207)
T 1wy7_A 49 EGKVVADLGAGTGV----LSYGALLL--GA--KEVICVEVDKE------AVDVLIE----NLGEFKGKFKVFI--GDVSE 108 (207)
T ss_dssp TTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESCHH------HHHHHHH----HTGGGTTSEEEEE--SCGGG
T ss_pred CcCEEEEeeCCCCH----HHHHHHHc--CC--CEEEEEECCHH------HHHHHHH----HHHHcCCCEEEEE--CchHH
Confidence 34589999999987 34455555 22 28999997642 2333333 3344566555543 22222
Q ss_pred ccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcC
Q 009376 352 VQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLS 398 (536)
Q Consensus 352 v~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~ 398 (536)
+. ..=++|+.|.++.. .... ....+|+.+..+-
T Consensus 109 ~~------~~~D~v~~~~p~~~--~~~~------~~~~~l~~~~~~l 141 (207)
T 1wy7_A 109 FN------SRVDIVIMNPPFGS--QRKH------ADRPFLLKAFEIS 141 (207)
T ss_dssp CC------CCCSEEEECCCCSS--SSTT------TTHHHHHHHHHHC
T ss_pred cC------CCCCEEEEcCCCcc--ccCC------chHHHHHHHHHhc
Confidence 21 12357888877642 2211 1235666665554
No 107
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=60.85 E-value=33 Score=33.05 Aligned_cols=109 Identities=17% Similarity=0.192 Sum_probs=59.8
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcC-CcEE
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFK-VPFE 341 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g-vpFe 341 (536)
.|++++.-.+.-+|+|+|.|.|. |...|+.++ .-++|||+.+. ++.+.|+..+ -.++
T Consensus 22 ~iv~~~~~~~~~~VLDiG~G~G~----lt~~L~~~~----~~~v~avEid~--------------~~~~~~~~~~~~~v~ 79 (249)
T 3ftd_A 22 KIAEELNIEEGNTVVEVGGGTGN----LTKVLLQHP----LKKLYVIELDR--------------EMVENLKSIGDERLE 79 (249)
T ss_dssp HHHHHTTCCTTCEEEEEESCHHH----HHHHHTTSC----CSEEEEECCCH--------------HHHHHHTTSCCTTEE
T ss_pred HHHHhcCCCCcCEEEEEcCchHH----HHHHHHHcC----CCeEEEEECCH--------------HHHHHHHhccCCCeE
Confidence 35555554455689999998875 667787772 35899999763 3334444331 1233
Q ss_pred EEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhc--CCcEEEEEecCC
Q 009376 342 FHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRL--SPKVVTLVEQES 409 (536)
Q Consensus 342 F~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL--~PkvvtlvEqEa 409 (536)
.+..+..+++...+. ..-.|+-|.++.. + -..+++.++.. -+..+++++.|.
T Consensus 80 --~i~~D~~~~~~~~~~--~~~~vv~NlPy~i--------~----~~il~~ll~~~~~~~~~~~m~Qkev 133 (249)
T 3ftd_A 80 --VINEDASKFPFCSLG--KELKVVGNLPYNV--------A----SLIIENTVYNKDCVPLAVFMVQKEV 133 (249)
T ss_dssp --EECSCTTTCCGGGSC--SSEEEEEECCTTT--------H----HHHHHHHHHTGGGCSEEEEEEEHHH
T ss_pred --EEEcchhhCChhHcc--CCcEEEEECchhc--------c----HHHHHHHHhcCCCCceEEEEEeHHH
Confidence 333333333333221 1225777776631 1 13455555543 467777887663
No 108
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=60.30 E-value=20 Score=32.32 Aligned_cols=94 Identities=18% Similarity=0.189 Sum_probs=48.8
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCcc
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYD 351 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~e 351 (536)
+.-.|+|+|.|.|. +...| + .-++||||.+.. .++...+++ -+ ++|.. .+..
T Consensus 36 ~~~~vLdiG~G~G~----~~~~l----~---~~~v~~vD~s~~------~~~~a~~~~------~~--~~~~~--~d~~- 87 (211)
T 2gs9_A 36 PGESLLEVGAGTGY----WLRRL----P---YPQKVGVEPSEA------MLAVGRRRA------PE--ATWVR--AWGE- 87 (211)
T ss_dssp CCSEEEEETCTTCH----HHHHC----C---CSEEEEECCCHH------HHHHHHHHC------TT--SEEEC--CCTT-
T ss_pred CCCeEEEECCCCCH----hHHhC----C---CCeEEEEeCCHH------HHHHHHHhC------CC--cEEEE--cccc-
Confidence 44589999999884 22333 1 128999997642 233333322 12 23322 2222
Q ss_pred ccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHH-HHhcCCcEEEEE
Q 009376 352 VQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLML-VKRLSPKVVTLV 405 (536)
Q Consensus 352 v~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~-VksL~Pkvvtlv 405 (536)
.+...++..=+|-+...|||+++ + ..+|+. .+-|+|.-.+++
T Consensus 88 ----~~~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 88 ----ALPFPGESFDVVLLFTTLEFVED-------V-ERVLLEARRVLRPGGALVV 130 (211)
T ss_dssp ----SCCSCSSCEEEEEEESCTTTCSC-------H-HHHHHHHHHHEEEEEEEEE
T ss_pred ----cCCCCCCcEEEEEEcChhhhcCC-------H-HHHHHHHHHHcCCCCEEEE
Confidence 12222333223334567899864 2 345554 467899865544
No 109
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=59.73 E-value=6.9 Score=38.21 Aligned_cols=44 Identities=23% Similarity=0.332 Sum_probs=27.6
Q ss_pred HHHHhcccC--CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 263 AIAEAMKDE--DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 263 AILEA~~ge--~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.+++.+..+ +.-.|+|+|.+.|. +...|+.+-+ ..+|||||.+.
T Consensus 35 ~~l~~l~~~~~~~~~VLDiGCG~G~----~~~~la~~~~---~~~v~gvDis~ 80 (292)
T 3g07_A 35 GRLRVLKPEWFRGRDVLDLGCNVGH----LTLSIACKWG---PSRMVGLDIDS 80 (292)
T ss_dssp GGGGTSCGGGTTTSEEEEESCTTCH----HHHHHHHHTC---CSEEEEEESCH
T ss_pred HHHHhhhhhhcCCCcEEEeCCCCCH----HHHHHHHHcC---CCEEEEECCCH
Confidence 344444433 44579999999983 3344554432 24999999864
No 110
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=58.31 E-value=26 Score=35.92 Aligned_cols=119 Identities=15% Similarity=0.130 Sum_probs=64.5
Q ss_pred hcHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC-
Q 009376 260 ANGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV- 338 (536)
Q Consensus 260 ANqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv- 338 (536)
....+++.+.....-+|+|+|.|.|.- ...|+.+. |..++||||.+.. .++.+.+++ +..|+
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~~----s~~la~~~---p~~~V~gvD~s~~------al~~Ar~n~----~~ngl~ 272 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGVI----GLTLLDKN---PQAKVVFVDESPM------AVASSRLNV----ETNMPE 272 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCHH----HHHHHHHC---TTCEEEEEESCHH------HHHHHHHHH----HHHCGG
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchHH----HHHHHHHC---CCCEEEEEECcHH------HHHHHHHHH----HHcCCC
Confidence 344688888776667899999999953 33444432 4569999997642 244444443 33444
Q ss_pred ---cEEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 339 ---PFEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 339 ---pFeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
.++|..-... + .+.-..=+.|+.|-+| |+..... ......+|+.+ +.|+|.-.+++.
T Consensus 273 ~~~~v~~~~~D~~--~----~~~~~~fD~Ii~nppf--h~~~~~~---~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 273 ALDRCEFMINNAL--S----GVEPFRFNAVLCNPPF--HQQHALT---DNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp GGGGEEEEECSTT--T----TCCTTCEEEEEECCCC------------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCceEEEEechhh--c----cCCCCCeeEEEECCCc--ccCcccC---HHHHHHHHHHHHHhCCCCcEEEEE
Confidence 3566543221 1 1111112467777665 4321110 11233566666 558998777654
No 111
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=58.26 E-value=1e+02 Score=27.49 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=29.0
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.+++.+.-.+.-.|+|+|.|.|.- ...|+.+ + |..++||||.+.
T Consensus 31 ~~l~~l~~~~~~~vLDiG~G~G~~----~~~la~~--~-~~~~v~~vD~s~ 74 (204)
T 3e05_A 31 VTLSKLRLQDDLVMWDIGAGSASV----SIEASNL--M-PNGRIFALERNP 74 (204)
T ss_dssp HHHHHTTCCTTCEEEEETCTTCHH----HHHHHHH--C-TTSEEEEEECCH
T ss_pred HHHHHcCCCCCCEEEEECCCCCHH----HHHHHHH--C-CCCEEEEEeCCH
Confidence 345555555566899999998862 2334443 1 456999999764
No 112
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=58.09 E-value=21 Score=32.92 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=23.5
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
-+|+|+|.|.|. +...|+.+ | .++||||.+.
T Consensus 50 ~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~ 80 (226)
T 3m33_A 50 TRVLEAGCGHGP----DAARFGPQ--A---ARWAAYDFSP 80 (226)
T ss_dssp CEEEEESCTTSH----HHHHHGGG--S---SEEEEEESCH
T ss_pred CeEEEeCCCCCH----HHHHHHHc--C---CEEEEEECCH
Confidence 479999999986 55566666 2 3899999764
No 113
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=57.04 E-value=1e+02 Score=28.95 Aligned_cols=109 Identities=16% Similarity=0.197 Sum_probs=55.2
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCcc
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYD 351 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~e 351 (536)
+.-.|+|+|.|.|.--.. |+.++ ..++||||.+.. .++.+.++ ++..|+.-..+.+..+..+
T Consensus 64 ~~~~vLDiGcG~G~~~~~----l~~~~----~~~v~gvD~s~~------~~~~a~~~----~~~~~~~~~v~~~~~d~~~ 125 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLK----YERAG----IGEYYGVDIAEV------SINDARVR----ARNMKRRFKVFFRAQDSYG 125 (298)
T ss_dssp TTCEEEEETCTTTTTHHH----HHHHT----CSEEEEEESCHH------HHHHHHHH----HHTSCCSSEEEEEESCTTT
T ss_pred CCCeEEEECCCCCHHHHH----HHHCC----CCEEEEEECCHH------HHHHHHHH----HHhcCCCccEEEEECCccc
Confidence 345899999999854333 44332 348999997642 24444433 3445553333333333322
Q ss_pred ccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 352 VQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 352 v~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
+. +. .++..=+|-+.+.|||+... ..+ ...+|+.+ +-|+|.-.+++.
T Consensus 126 ~~---~~-~~~~fD~v~~~~~l~~~~~~---~~~-~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 126 RH---MD-LGKEFDVISSQFSFHYAFST---SES-LDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp SC---CC-CSSCEEEEEEESCGGGGGSS---HHH-HHHHHHHHHHTEEEEEEEEEE
T ss_pred cc---cC-CCCCcCEEEECchhhhhcCC---HHH-HHHHHHHHHHhcCCCCEEEEE
Confidence 21 10 12322233344567874211 122 34555555 678998766554
No 114
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=56.94 E-value=11 Score=40.68 Aligned_cols=84 Identities=23% Similarity=0.347 Sum_probs=50.9
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcC-CcEEEEEeecCCc
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFK-VPFEFHAANMSGY 350 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g-vpFeF~~V~~~~~ 350 (536)
+-+.|+|.|.|.|. |-..||.+ | -++||||.+... ++.. + ..|+.-| +..+|......
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~--g---a~V~giD~~~~~------i~~a-~---~~a~~~~~~~~~~~~~~~~-- 124 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK--G---ATIVGIDFQQEN------INVC-R---ALAEENPDFAAEFRVGRIE-- 124 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCHHH------HHHH-H---HHHHTSTTSEEEEEECCHH--
T ss_pred CCCeEEEECCCCcH----HHHHHHhC--C---CEEEEECCCHHH------HHHH-H---HHHHhcCCCceEEEECCHH--
Confidence 34789999999985 66778876 3 279999986531 3332 1 2344445 67777665432
Q ss_pred cccccCccccCCceEEEeeccccCCCCCC
Q 009376 351 DVQLENLRVQPGEAVAVNFAFMLHHVPDE 379 (536)
Q Consensus 351 ev~~~~L~i~~gEaLaVN~~~~LH~l~de 379 (536)
++.. ...++..=||-|+-.|||++|.
T Consensus 125 ~~~~---~~~~~~fD~v~~~e~~ehv~~~ 150 (569)
T 4azs_A 125 EVIA---ALEEGEFDLAIGLSVFHHIVHL 150 (569)
T ss_dssp HHHH---HCCTTSCSEEEEESCHHHHHHH
T ss_pred HHhh---hccCCCccEEEECcchhcCCCH
Confidence 1100 1123334456677889999763
No 115
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=56.07 E-value=77 Score=30.16 Aligned_cols=112 Identities=15% Similarity=0.236 Sum_probs=58.2
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-EEEEEeecCCc
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-FEFHAANMSGY 350 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF~~V~~~~~ 350 (536)
+..+|+|+|.|.|.-=..|.+. . |..++||||.+.. .++.+.++ ++..|++ .+|. ..+..
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~---~----~~~~v~~vD~s~~------~l~~a~~n----~~~~~~~~v~~~--~~d~~ 169 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASE---R----PDCEIIAVDRMPD------AVSLAQRN----AQHLAIKNIHIL--QSDWF 169 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHH---C----TTSEEEEECSSHH------HHHHHHHH----HHHHTCCSEEEE--CCSTT
T ss_pred CCCEEEEecCCccHHHHHHHHh---C----CCCEEEEEECCHH------HHHHHHHH----HHHcCCCceEEE--Ecchh
Confidence 3458999999988643333332 2 3469999997643 24444444 3445665 4443 33322
Q ss_pred cccccCccccCCceEEEeeccc-----------cCCCCCCCccc----cchHHHHHHHH-HhcCCcEEEEEe
Q 009376 351 DVQLENLRVQPGEAVAVNFAFM-----------LHHVPDESVST----ENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 351 ev~~~~L~i~~gEaLaVN~~~~-----------LH~l~desv~~----~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
+. +.-..=+.|+.|.++. ++|-|...... -.....+++.+ +-|+|.-++++|
T Consensus 170 ~~----~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 170 SA----LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp GG----GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hh----cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 21 1111124677775542 23333222110 01234556555 578999888877
No 116
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=56.06 E-value=21 Score=34.31 Aligned_cols=44 Identities=23% Similarity=0.117 Sum_probs=27.5
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHH
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRL 329 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL 329 (536)
+.-.|+|+|.|.|. +..|+ .+.. .-+|||||.+.. .++.+.+++
T Consensus 71 ~~~~vLDiGcG~G~-~~~l~----~~~~---~~~v~gvD~s~~------~l~~a~~~~ 114 (289)
T 2g72_A 71 SGRTLIDIGSGPTV-YQLLS----ACSH---FEDITMTDFLEV------NRQELGRWL 114 (289)
T ss_dssp CCSEEEEETCTTCC-GGGTT----GGGG---CSEEEEECSCHH------HHHHHHHHH
T ss_pred CCCeEEEECCCcCh-HHHHh----hccC---CCeEEEeCCCHH------HHHHHHHHH
Confidence 44589999999998 54332 2221 238999998642 355555544
No 117
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=55.20 E-value=13 Score=34.44 Aligned_cols=104 Identities=23% Similarity=0.319 Sum_probs=52.6
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCcccc
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDVQ 353 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~ 353 (536)
-.|+|+|.|.|. +...|+.+ ++ ++||||.+.. .++...+++ . .-..+|.... ..++.
T Consensus 58 ~~vLD~GcG~G~----~~~~la~~--~~---~v~gvD~s~~------~~~~a~~~~----~--~~~~~~~~~d--~~~~~ 114 (245)
T 3ggd_A 58 LPLIDFACGNGT----QTKFLSQF--FP---RVIGLDVSKS------ALEIAAKEN----T--AANISYRLLD--GLVPE 114 (245)
T ss_dssp SCEEEETCTTSH----HHHHHHHH--SS---CEEEEESCHH------HHHHHHHHS----C--CTTEEEEECC--TTCHH
T ss_pred CeEEEEcCCCCH----HHHHHHHh--CC---CEEEEECCHH------HHHHHHHhC----c--ccCceEEECc--ccccc
Confidence 468999999874 33444443 22 8999997642 233333332 1 1134444322 22211
Q ss_pred ccCccccCCc-eEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEE-EEEec
Q 009376 354 LENLRVQPGE-AVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVV-TLVEQ 407 (536)
Q Consensus 354 ~~~L~i~~gE-aLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvv-tlvEq 407 (536)
.. .....+. .-+|-+...+||++++ .+..+|+.+ +.|+|.-. +++|-
T Consensus 115 ~~-~~~~~~~~~d~v~~~~~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 115 QA-AQIHSEIGDANIYMRTGFHHIPVE------KRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HH-HHHHHHHCSCEEEEESSSTTSCGG------GHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cc-cccccccCccEEEEcchhhcCCHH------HHHHHHHHHHHHcCCCCEEEEEeC
Confidence 11 0011001 2345555678888642 234555555 67899754 56653
No 118
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=54.42 E-value=1.1e+02 Score=27.21 Aligned_cols=105 Identities=13% Similarity=0.173 Sum_probs=55.9
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-EE
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-FE 341 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-Fe 341 (536)
.+++.+.-.+.-+|+|+|.|.|..-. .|+.+ + -++|||+.+.. .++.+.+++ +..|++ .+
T Consensus 68 ~~~~~l~~~~~~~vLdiG~G~G~~~~----~la~~-~----~~v~~vD~~~~------~~~~a~~~~----~~~~~~~v~ 128 (210)
T 3lbf_A 68 RMTELLELTPQSRVLEIGTGSGYQTA----ILAHL-V----QHVCSVERIKG------LQWQARRRL----KNLDLHNVS 128 (210)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHH----HHHHH-S----SEEEEEESCHH------HHHHHHHHH----HHTTCCSEE
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHH----HHHHh-C----CEEEEEecCHH------HHHHHHHHH----HHcCCCceE
Confidence 34555554556689999999886433 33333 2 48999997642 244444443 345654 44
Q ss_pred EEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 009376 342 FHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVE 406 (536)
Q Consensus 342 F~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~PkvvtlvE 406 (536)
|.. .+..+.... -.+=+.|+++ ..+||+++ ...+.|+|.-.+++.
T Consensus 129 ~~~--~d~~~~~~~---~~~~D~i~~~--~~~~~~~~-------------~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 129 TRH--GDGWQGWQA---RAPFDAIIVT--AAPPEIPT-------------ALMTQLDEGGILVLP 173 (210)
T ss_dssp EEE--SCGGGCCGG---GCCEEEEEES--SBCSSCCT-------------HHHHTEEEEEEEEEE
T ss_pred EEE--CCcccCCcc---CCCccEEEEc--cchhhhhH-------------HHHHhcccCcEEEEE
Confidence 433 222211110 0111344444 46688864 245778887555443
No 119
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=54.20 E-value=31 Score=32.26 Aligned_cols=112 Identities=15% Similarity=0.180 Sum_probs=57.0
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-EEEEEeecCCc
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-FEFHAANMSGY 350 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF~~V~~~~~ 350 (536)
+.-.|+|+|.|.|.-... ||.+. |..+++||+.+.. .++.+.+ -++..|++ ++|.. .+..
T Consensus 34 ~~~~vLDiGcG~G~~~~~----lA~~~---p~~~v~giD~s~~------~l~~a~~----~~~~~~l~nv~~~~--~Da~ 94 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVA----MAKDR---PEQDFLGIEVHSP------GVGACLA----SAHEEGLSNLRVMC--HDAV 94 (218)
T ss_dssp CCCEEEEESCTTCHHHHH----HHHHC---TTSEEEEECSCHH------HHHHHHH----HHHHTTCSSEEEEC--SCHH
T ss_pred CCCeEEEEeeeChHHHHH----HHHHC---CCCeEEEEEecHH------HHHHHHH----HHHHhCCCcEEEEE--CCHH
Confidence 445799999999864443 44332 4578999998643 2443333 34555663 55532 2222
Q ss_pred cccccCccccCC--ceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 351 DVQLENLRVQPG--EAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 351 ev~~~~L~i~~g--EaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
++-... +.++ +.|.+|++.-.++......... ...+|+.+ +-|+|.-++++.
T Consensus 95 ~~l~~~--~~~~~~d~v~~~~~~p~~~~~~~~rr~~--~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 95 EVLHKM--IPDNSLRMVQLFFPDPWHKARHNKRRIV--QVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp HHHHHH--SCTTCEEEEEEESCCCCCSGGGGGGSSC--SHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHH--cCCCChheEEEeCCCCccchhhhhhhhh--hHHHHHHHHHHcCCCcEEEEE
Confidence 210001 1222 3566665433332211000000 12477777 559999988775
No 120
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=53.93 E-value=30 Score=30.19 Aligned_cols=105 Identities=13% Similarity=0.094 Sum_probs=56.3
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--EEEEEeecCCcc
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--FEFHAANMSGYD 351 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~~e 351 (536)
-.|+|+|.|.|.- ...|+.++ .-++||||.+.. .++.+. +.++..|++ .+|.. .+..+
T Consensus 33 ~~vLDlGcG~G~~----~~~l~~~~----~~~v~~vD~~~~------~~~~a~----~~~~~~~~~~~~~~~~--~d~~~ 92 (177)
T 2esr_A 33 GRVLDLFAGSGGL----AIEAVSRG----MSAAVLVEKNRK------AQAIIQ----DNIIMTKAENRFTLLK--MEAER 92 (177)
T ss_dssp CEEEEETCTTCHH----HHHHHHTT----CCEEEEECCCHH------HHHHHH----HHHHTTTCGGGEEEEC--SCHHH
T ss_pred CeEEEeCCCCCHH----HHHHHHcC----CCEEEEEECCHH------HHHHHH----HHHHHcCCCCceEEEE--CcHHH
Confidence 4799999998853 23455552 358999997642 233333 334556765 55543 22222
Q ss_pred ccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH---HhcCCcEEEEEecCCCC
Q 009376 352 VQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV---KRLSPKVVTLVEQESNT 411 (536)
Q Consensus 352 v~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V---ksL~PkvvtlvEqEan~ 411 (536)
... .+. ..=+.|+.|.++.. ...+.+++.+ +-|+|.-+++++.....
T Consensus 93 ~~~-~~~-~~fD~i~~~~~~~~-----------~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 93 AID-CLT-GRFDLVFLDPPYAK-----------ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHH-HBC-SCEEEEEECCSSHH-----------HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred hHH-hhc-CCCCEEEECCCCCc-----------chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 100 000 01145666655421 1234566666 67899988887755443
No 121
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=51.06 E-value=1.5e+02 Score=27.39 Aligned_cols=44 Identities=11% Similarity=0.088 Sum_probs=28.1
Q ss_pred HHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 265 AEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 265 LEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
++.+.+.+...|+|+|.|.|.- ...|+.+- ..|..+|||||-+.
T Consensus 44 l~~~~~~~~~~vLD~gcGsG~~----~~~la~~~-~~~~~~v~gvDis~ 87 (250)
T 1o9g_A 44 LARLPGDGPVTLWDPCCGSGYL----LTVLGLLH-RRSLRQVIASDVDP 87 (250)
T ss_dssp HHTSSCCSCEEEEETTCTTSHH----HHHHHHHT-GGGEEEEEEEESCH
T ss_pred HHhcccCCCCeEEECCCCCCHH----HHHHHHHh-ccCCCeEEEEECCH
Confidence 3444444668999999999943 33333331 11457999999764
No 122
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=50.16 E-value=67 Score=33.19 Aligned_cols=100 Identities=19% Similarity=0.191 Sum_probs=52.5
Q ss_pred EEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCccccc
Q 009376 275 HIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDVQL 354 (536)
Q Consensus 275 HIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~~ 354 (536)
+|+|+|.|.| +.++ +|.|.|. -|++||+.+.. ++ . ..+.++.-|+.=....+..+.+++++
T Consensus 86 ~VLDvG~GtG--iLs~---~Aa~aGA---~~V~ave~s~~-------~~-~---a~~~~~~n~~~~~i~~i~~~~~~~~l 146 (376)
T 4hc4_A 86 TVLDVGAGTG--ILSI---FCAQAGA---RRVYAVEASAI-------WQ-Q---AREVVRFNGLEDRVHVLPGPVETVEL 146 (376)
T ss_dssp EEEEETCTTS--HHHH---HHHHTTC---SEEEEEECSTT-------HH-H---HHHHHHHTTCTTTEEEEESCTTTCCC
T ss_pred EEEEeCCCcc--HHHH---HHHHhCC---CEEEEEeChHH-------HH-H---HHHHHHHcCCCceEEEEeeeeeeecC
Confidence 5888887777 3444 3445442 27899996521 22 2 23345556665444455555555432
Q ss_pred cCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEE
Q 009376 355 ENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTL 404 (536)
Q Consensus 355 ~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtl 404 (536)
. +.+=+|-+.+.-+-+..|+ ..+.+|... |-|+|.-+++
T Consensus 147 p------e~~DvivsE~~~~~l~~e~-----~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 147 P------EQVDAIVSEWMGYGLLHES-----MLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp S------SCEEEEECCCCBTTBTTTC-----SHHHHHHHHHHHEEEEEEEE
T ss_pred C------ccccEEEeecccccccccc-----hhhhHHHHHHhhCCCCceEC
Confidence 2 1122222333334444443 356777776 5678876654
No 123
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=50.05 E-value=82 Score=29.48 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=23.6
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
+.-.|+|+|.|.|. +...|+.+ + .++||||.+.
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s~ 86 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER-G----FEVVLVDPSK 86 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT-T----CEEEEEESCH
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc-C----CeEEEEeCCH
Confidence 44589999998886 34456655 2 3899999764
No 124
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=49.55 E-value=43 Score=29.41 Aligned_cols=51 Identities=22% Similarity=0.326 Sum_probs=31.4
Q ss_pred EEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC-cEEEEE
Q 009376 275 HIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV-PFEFHA 344 (536)
Q Consensus 275 HIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-pFeF~~ 344 (536)
+|+|+|.|.|.-- ..||.+ .-++||||.+.. .++.+.+++. ..|+ ..+|..
T Consensus 25 ~vLDiGcG~G~~~----~~la~~-----~~~v~~vD~s~~------~l~~a~~~~~----~~~~~~v~~~~ 76 (185)
T 3mti_A 25 IVVDATMGNGNDT----AFLAGL-----SKKVYAFDVQEQ------ALGKTSQRLS----DLGIENTELIL 76 (185)
T ss_dssp EEEESCCTTSHHH----HHHHTT-----SSEEEEEESCHH------HHHHHHHHHH----HHTCCCEEEEE
T ss_pred EEEEEcCCCCHHH----HHHHHh-----CCEEEEEECCHH------HHHHHHHHHH----HcCCCcEEEEe
Confidence 6899999988633 345655 258999997643 3555544443 3454 355544
No 125
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=48.63 E-value=1.6e+02 Score=26.76 Aligned_cols=63 Identities=14% Similarity=0.167 Sum_probs=38.9
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--E
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--F 340 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--F 340 (536)
.+++.+.-.+.-.|+|+|.|.|. +...||.+ + .++||||.+.. .++.+ .+-++..|++ +
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~s~~------~~~~a----~~~~~~~g~~~~v 106 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEPRAD------RIENI----QKNIDTYGLSPRM 106 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHH------HHHHH----HHHHHHTTCTTTE
T ss_pred HHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeCCHH------HHHHH----HHHHHHcCCCCCE
Confidence 45555554455579999998875 33455555 2 48999997642 23333 3345667876 6
Q ss_pred EEEE
Q 009376 341 EFHA 344 (536)
Q Consensus 341 eF~~ 344 (536)
+|..
T Consensus 107 ~~~~ 110 (204)
T 3njr_A 107 RAVQ 110 (204)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6644
No 126
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=47.66 E-value=1.5e+02 Score=28.80 Aligned_cols=113 Identities=19% Similarity=0.191 Sum_probs=59.3
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--EEEEEeecCCcc
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--FEFHAANMSGYD 351 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~~e 351 (536)
-.|+|+|.|.|.--. .|+.+ |..++||||.+.. .++.+.++ ++..|+. ++|..- +..+
T Consensus 125 ~~vLDlG~GsG~~~~----~la~~----~~~~v~~vDis~~------al~~A~~n----~~~~~l~~~v~~~~~--D~~~ 184 (284)
T 1nv8_A 125 KTVADIGTGSGAIGV----SVAKF----SDAIVFATDVSSK------AVEIARKN----AERHGVSDRFFVRKG--EFLE 184 (284)
T ss_dssp CEEEEESCTTSHHHH----HHHHH----SSCEEEEEESCHH------HHHHHHHH----HHHTTCTTSEEEEES--STTG
T ss_pred CEEEEEeCchhHHHH----HHHHC----CCCEEEEEECCHH------HHHHHHHH----HHHcCCCCceEEEEC--cchh
Confidence 479999999985433 44444 4579999997643 24444443 4556775 666542 2222
Q ss_pred ccccCccccCCceEEEeeccccC--CCCCCCc--------cccchHHHHHHHH-HhcCCcEEEEEecC
Q 009376 352 VQLENLRVQPGEAVAVNFAFMLH--HVPDESV--------STENYRDRLLMLV-KRLSPKVVTLVEQE 408 (536)
Q Consensus 352 v~~~~L~i~~gEaLaVN~~~~LH--~l~desv--------~~~n~rd~~L~~V-ksL~PkvvtlvEqE 408 (536)
.-...+ .+-+.|+.|-++.-. ++..+-. ...+..+-+-+.+ +.++|.-++++|-.
T Consensus 185 ~~~~~f--~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 185 PFKEKF--ASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp GGGGGT--TTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred hccccc--CCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 111111 111678888554311 1211100 0011223344555 67889988888743
No 127
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=47.20 E-value=42 Score=31.43 Aligned_cols=35 Identities=26% Similarity=0.207 Sum_probs=25.1
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
..=+|+|+|.|.|. +...||.+. |..++||||.+.
T Consensus 24 ~~~~vLDiGCG~G~----~~~~la~~~---~~~~v~GvD~s~ 58 (225)
T 3p2e_A 24 FDRVHIDLGTGDGR----NIYKLAIND---QNTFYIGIDPVK 58 (225)
T ss_dssp CSEEEEEETCTTSH----HHHHHHHTC---TTEEEEEECSCC
T ss_pred CCCEEEEEeccCcH----HHHHHHHhC---CCCEEEEEeCCH
Confidence 33478999998883 455566543 458999999874
No 128
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=45.17 E-value=37 Score=33.36 Aligned_cols=100 Identities=18% Similarity=0.270 Sum_probs=57.0
Q ss_pred HhcCCcchhhh-hhhcHH----HHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCCh
Q 009376 247 YEVCPYFKFGY-MSANGA----IAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGG 321 (536)
Q Consensus 247 ~e~~P~~kFa~-~tANqA----ILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~ 321 (536)
+.+-|=-++|+ |..|.. |++++.-... +|+|+|-|.|. |-..|+.+. -++|||+.+.. .
T Consensus 17 ~~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~~-----~~V~avEid~~------~ 80 (271)
T 3fut_A 17 HGLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGA----LTRALLEAG-----AEVTAIEKDLR------L 80 (271)
T ss_dssp TTCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSH----HHHHHHHTT-----CCEEEEESCGG------G
T ss_pred cCCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHH----HHHHHHHcC-----CEEEEEECCHH------H
Confidence 44567667776 444544 5555554556 99999999885 556676662 37999997653 2
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEeecCCccccccCccccCCceEEEeeccc
Q 009376 322 LGIVGKRLSKLAEQFKVPFEFHAANMSGYDVQLENLRVQPGEAVAVNFAFM 372 (536)
Q Consensus 322 L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~ 372 (536)
++...+++. +-.+++ +..+..+++...+ .....|+-|.++.
T Consensus 81 ~~~l~~~~~------~~~v~v--i~~D~l~~~~~~~--~~~~~iv~NlPy~ 121 (271)
T 3fut_A 81 RPVLEETLS------GLPVRL--VFQDALLYPWEEV--PQGSLLVANLPYH 121 (271)
T ss_dssp HHHHHHHTT------TSSEEE--EESCGGGSCGGGS--CTTEEEEEEECSS
T ss_pred HHHHHHhcC------CCCEEE--EECChhhCChhhc--cCccEEEecCccc
Confidence 444444332 123443 3333333333222 1345788888775
No 129
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=44.63 E-value=1.1e+02 Score=29.77 Aligned_cols=42 Identities=10% Similarity=0.204 Sum_probs=28.2
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.|++++.-.+.-+|+|+|.|.|.--..|.+ + + -++|||+.+.
T Consensus 19 ~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~----~-~----~~v~~vD~~~ 60 (285)
T 1zq9_A 19 SIIDKAALRPTDVVLEVGPGTGNMTVKLLE----K-A----KKVVACELDP 60 (285)
T ss_dssp HHHHHTCCCTTCEEEEECCTTSTTHHHHHH----H-S----SEEEEEESCH
T ss_pred HHHHhcCCCCCCEEEEEcCcccHHHHHHHh----h-C----CEEEEEECCH
Confidence 444555444455899999999986655544 3 2 2899999764
No 130
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=44.03 E-value=1.7e+02 Score=28.52 Aligned_cols=109 Identities=14% Similarity=0.159 Sum_probs=56.9
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-E
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-F 340 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-F 340 (536)
..+++.+.-.+.-+|+|+|.|.|. +...|+.+ +++..++|||+.+.. .++.+.++ ++..|++ .
T Consensus 65 ~~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~~------~~~~a~~~----~~~~g~~~v 128 (317)
T 1dl5_A 65 ALFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRV--VGEKGLVVSVEYSRK------ICEIAKRN----VERLGIENV 128 (317)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--HCTTCEEEEEESCHH------HHHHHHHH----HHHTTCCSE
T ss_pred HHHHHhcCCCCcCEEEEecCCchH----HHHHHHHh--cCCCCEEEEEECCHH------HHHHHHHH----HHHcCCCCe
Confidence 345555554555689999998885 33344433 223468999997642 24444333 3445654 5
Q ss_pred EEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 009376 341 EFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVE 406 (536)
Q Consensus 341 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~PkvvtlvE 406 (536)
+|... +..+.-+ .-.+=++|+++ ..+||+++ ...+.|+|.-++++.
T Consensus 129 ~~~~~--d~~~~~~---~~~~fD~Iv~~--~~~~~~~~-------------~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 129 IFVCG--DGYYGVP---EFSPYDVIFVT--VGVDEVPE-------------TWFTQLKEGGRVIVP 174 (317)
T ss_dssp EEEES--CGGGCCG---GGCCEEEEEEC--SBBSCCCH-------------HHHHHEEEEEEEEEE
T ss_pred EEEEC--Chhhccc---cCCCeEEEEEc--CCHHHHHH-------------HHHHhcCCCcEEEEE
Confidence 55432 2221100 00111344544 45677751 234578888766554
No 131
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=43.68 E-value=50 Score=30.02 Aligned_cols=102 Identities=17% Similarity=0.137 Sum_probs=53.9
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC-cEEEEEeecCCccc
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV-PFEFHAANMSGYDV 352 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-pFeF~~V~~~~~ev 352 (536)
-+|+|+|.|.|.--..+ +.+ |. -+|||||.+.. .++.+.++ ++..|+ ..+|.. .+..+.
T Consensus 56 ~~vLDlgcG~G~~~~~l----~~~--~~--~~V~~vD~s~~------~l~~a~~~----~~~~~~~~v~~~~--~D~~~~ 115 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEA----LSR--YA--AGATLIEMDRA------VSQQLIKN----LATLKAGNARVVN--SNAMSF 115 (202)
T ss_dssp CEEEETTCTTCHHHHHH----HHT--TC--SEEEEECSCHH------HHHHHHHH----HHHTTCCSEEEEC--SCHHHH
T ss_pred CeEEEeCCCcCHHHHHH----Hhc--CC--CEEEEEECCHH------HHHHHHHH----HHHcCCCcEEEEE--CCHHHH
Confidence 47999999888643332 223 11 28999997642 24444433 344565 444433 221111
Q ss_pred cccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHh---cCCcEEEEEecC
Q 009376 353 QLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKR---LSPKVVTLVEQE 408 (536)
Q Consensus 353 ~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~Vks---L~PkvvtlvEqE 408 (536)
... .-..=+.|++|.+|. . .....+|+.++. |+|.-+++++..
T Consensus 116 ~~~--~~~~fD~V~~~~p~~---~--------~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 116 LAQ--KGTPHNIVFVDPPFR---R--------GLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp HSS--CCCCEEEEEECCSSS---T--------TTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred Hhh--cCCCCCEEEECCCCC---C--------CcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 000 001113566665532 1 123567888776 999988777644
No 132
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=42.74 E-value=72 Score=28.50 Aligned_cols=69 Identities=12% Similarity=0.025 Sum_probs=40.3
Q ss_pred hhhcHHHHHhcc--cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHh
Q 009376 258 MSANGAIAEAMK--DEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQ 335 (536)
Q Consensus 258 ~tANqAILEA~~--ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s 335 (536)
......+++.+. -.+.-.|+|+|.|.|. +...|+.+ +..++||||.+.. .++.+.+ .++.
T Consensus 44 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~----~~~~v~~vD~s~~------~~~~a~~----~~~~ 105 (205)
T 3grz_A 44 HQTTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKL----GAKSVLATDISDE------SMTAAEE----NAAL 105 (205)
T ss_dssp HHHHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHT----TCSEEEEEESCHH------HHHHHHH----HHHH
T ss_pred CccHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHC----CCCEEEEEECCHH------HHHHHHH----HHHH
Confidence 344455666655 2345689999999984 33346655 2358999997642 2333333 3444
Q ss_pred cCCc-EEEEE
Q 009376 336 FKVP-FEFHA 344 (536)
Q Consensus 336 ~gvp-FeF~~ 344 (536)
.|++ ++|..
T Consensus 106 ~~~~~v~~~~ 115 (205)
T 3grz_A 106 NGIYDIALQK 115 (205)
T ss_dssp TTCCCCEEEE
T ss_pred cCCCceEEEe
Confidence 5665 55543
No 133
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=41.06 E-value=1.9e+02 Score=25.79 Aligned_cols=45 Identities=9% Similarity=0.116 Sum_probs=29.9
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.+++.+.-.+.-.|+|+|.|.|.--..|.+.+ .|..++|+|+.+.
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~~~ 112 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV------GEDGLVVSIERIP 112 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEESCH
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh------CCCCEEEEEeCCH
Confidence 44555544455689999999886655555544 2345899999764
No 134
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=40.93 E-value=2.4e+02 Score=28.79 Aligned_cols=117 Identities=16% Similarity=0.182 Sum_probs=63.4
Q ss_pred cHHHHHhccc------CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHH
Q 009376 261 NGAIAEAMKD------EDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAE 334 (536)
Q Consensus 261 NqAILEA~~g------e~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~ 334 (536)
...+++.+.. .+.-+|+|+|.|.|.- ...|+.+ | .+|||||.+.. .++.+.++ ++
T Consensus 216 t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~----~~~la~~--g---~~V~gvDis~~------al~~A~~n----~~ 276 (381)
T 3dmg_A 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGAL----TLPLARM--G---AEVVGVEDDLA------SVLSLQKG----LE 276 (381)
T ss_dssp HHHHHHHHHHHHCTTTTTTCEEEEETCTTSTT----HHHHHHT--T---CEEEEEESBHH------HHHHHHHH----HH
T ss_pred HHHHHHHHHHhhcccCCCCCEEEEEeeeCCHH----HHHHHHc--C---CEEEEEECCHH------HHHHHHHH----HH
Confidence 3556666632 2445899999999853 3344444 2 39999997642 24444443 34
Q ss_pred hcCCcEEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHH-HHHhcCCcEEEEEe
Q 009376 335 QFKVPFEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLM-LVKRLSPKVVTLVE 406 (536)
Q Consensus 335 s~gvpFeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~-~VksL~PkvvtlvE 406 (536)
..|+..+|..- +..+.... -..=++|+.|.+| |+..... ......+++ ..+.|+|.-.+++.
T Consensus 277 ~~~~~v~~~~~--D~~~~~~~---~~~fD~Ii~npp~--~~~~~~~---~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 277 ANALKAQALHS--DVDEALTE---EARFDIIVTNPPF--HVGGAVI---LDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp HTTCCCEEEEC--STTTTSCT---TCCEEEEEECCCC--CTTCSSC---CHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HcCCCeEEEEc--chhhcccc---CCCeEEEEECCch--hhccccc---HHHHHHHHHHHHHhcCcCcEEEEE
Confidence 55677666543 22221111 0112466666654 5532211 122344554 55778998877665
No 135
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=40.54 E-value=1.2e+02 Score=29.75 Aligned_cols=43 Identities=16% Similarity=0.136 Sum_probs=28.7
Q ss_pred HHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 262 GAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 262 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
+.|++++.-.+.-.|+|+|.|.|.-- ..|+.+ + -++|||+.+.
T Consensus 32 ~~i~~~~~~~~~~~VLDiG~G~G~lt----~~La~~-~----~~v~~vDi~~ 74 (299)
T 2h1r_A 32 DKIIYAAKIKSSDIVLEIGCGTGNLT----VKLLPL-A----KKVITIDIDS 74 (299)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTSTTH----HHHTTT-S----SEEEEECSCH
T ss_pred HHHHHhcCCCCcCEEEEEcCcCcHHH----HHHHhc-C----CEEEEEECCH
Confidence 34555555444458999999998744 455555 2 3899999764
No 136
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=38.66 E-value=82 Score=29.59 Aligned_cols=102 Identities=12% Similarity=0.122 Sum_probs=53.5
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--EEEEEeecCCc
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--FEFHAANMSGY 350 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~~ 350 (536)
.-.|+|+|.+.|.--.. ||.+- |+..+||+||.+.. .++.+. +.++..|++ .+|..-.. .
T Consensus 64 ~~~VLdiG~G~G~~~~~----la~~~--~~~~~v~~vD~s~~------~~~~a~----~~~~~~g~~~~v~~~~~d~--~ 125 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIW----MAREL--PADGQLLTLEADAH------HAQVAR----ENLQLAGVDQRVTLREGPA--L 125 (248)
T ss_dssp CSEEEEECCTTSHHHHH----HHTTS--CTTCEEEEEECCHH------HHHHHH----HHHHHTTCTTTEEEEESCH--H
T ss_pred CCEEEEecCCchHHHHH----HHHhC--CCCCEEEEEECCHH------HHHHHH----HHHHHcCCCCcEEEEEcCH--H
Confidence 35899999998865443 33332 33579999997642 233333 344556765 55544221 1
Q ss_pred cccccCcc-ccCCceEEEeeccccCCCCCCCccccchHHHHHH-HHHhcCCcEEEEEe
Q 009376 351 DVQLENLR-VQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLM-LVKRLSPKVVTLVE 406 (536)
Q Consensus 351 ev~~~~L~-i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~-~VksL~PkvvtlvE 406 (536)
+. +..+. ..+=+.|+++.. ..+. ..+|+ ..+-|+|.-+++++
T Consensus 126 ~~-l~~~~~~~~fD~V~~d~~------------~~~~-~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 126 QS-LESLGECPAFDLIFIDAD------------KPNN-PHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp HH-HHTCCSCCCCSEEEECSC------------GGGH-HHHHHHHHHTCCTTCEEEEE
T ss_pred HH-HHhcCCCCCeEEEEECCc------------hHHH-HHHHHHHHHhcCCCeEEEEe
Confidence 11 01110 011234554431 1222 33454 45788999888875
No 137
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=38.59 E-value=72 Score=28.41 Aligned_cols=96 Identities=15% Similarity=0.102 Sum_probs=52.1
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-EEEEEeecCCccc
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-FEFHAANMSGYDV 352 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF~~V~~~~~ev 352 (536)
-+|+|+|.|.|.--..|.+.+ |..++||||.+.. .++.+ .+.++..|++ ++|... +..+.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s~~------~~~~a----~~~~~~~~~~~v~~~~~--d~~~~ 127 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDSLGK------RVRFL----RQVQHELKLENIEPVQS--RVEEF 127 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-------TTSEEEEEESCHH------HHHHH----HHHHHHTTCSSEEEEEC--CTTTS
T ss_pred CeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeCCHH------HHHHH----HHHHHHcCCCCeEEEec--chhhC
Confidence 489999999997655555432 3469999997642 23333 3334556765 555433 22222
Q ss_pred cccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 353 QLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 353 ~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
... ..=+.|+.|. ++ +...+|+.+ +.|+|.-+++++
T Consensus 128 ~~~----~~~D~i~~~~---~~-----------~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 128 PSE----PPFDGVISRA---FA-----------SLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp CCC----SCEEEEECSC---SS-----------SHHHHHHHHTTSEEEEEEEEEE
T ss_pred Ccc----CCcCEEEEec---cC-----------CHHHHHHHHHHhcCCCcEEEEE
Confidence 110 0112333221 11 234566666 568998877776
No 138
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=38.49 E-value=65 Score=30.67 Aligned_cols=56 Identities=13% Similarity=0.205 Sum_probs=34.4
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-EEEEE
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-FEFHA 344 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF~~ 344 (536)
..-+|+|+|.|.|.--..|-+.. |..+||+||.+.. .++. +.+-++.+|+. .+|..
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~-------~~~~v~~vD~s~~------~~~~----a~~~~~~~~l~~v~~~~ 136 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVR-------PELELVLVDATRK------KVAF----VERAIEVLGLKGARALW 136 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHC-------TTCEEEEEESCHH------HHHH----HHHHHHHHTCSSEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHC-------CCCEEEEEECCHH------HHHH----HHHHHHHhCCCceEEEE
Confidence 34589999999987544443321 4579999998642 2333 33445556774 55543
No 139
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=38.13 E-value=2.7e+02 Score=26.47 Aligned_cols=45 Identities=16% Similarity=0.202 Sum_probs=29.3
Q ss_pred HHHHhcc---cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 263 AIAEAMK---DEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 263 AILEA~~---ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
+|+++++ =..-=.|+|+|.+.|. |...|-.+... .=+|+|||.+.
T Consensus 64 ~ll~~l~~~~l~~g~~VLDlG~GtG~-~t~~la~~v~~-----~G~V~avD~s~ 111 (232)
T 3id6_C 64 AILKGLKTNPIRKGTKVLYLGAASGT-TISHVSDIIEL-----NGKAYGVEFSP 111 (232)
T ss_dssp HHHTTCSCCSCCTTCEEEEETCTTSH-HHHHHHHHHTT-----TSEEEEEECCH
T ss_pred HHHhhhhhcCCCCCCEEEEEeecCCH-HHHHHHHHhCC-----CCEEEEEECcH
Confidence 4455543 2334578999999998 66666555432 23899999753
No 140
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=36.44 E-value=1.3e+02 Score=27.06 Aligned_cols=105 Identities=22% Similarity=0.244 Sum_probs=55.3
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC---cEEEEEeecCCc
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV---PFEFHAANMSGY 350 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv---pFeF~~V~~~~~ 350 (536)
-.|+|+|.|.|.--. .++.+ |. -++||||.+.. .++.+.++ ++..|+ ..+|..- +..
T Consensus 55 ~~vLDlGcGtG~~~~----~~~~~--~~--~~v~gvD~s~~------~l~~a~~~----~~~~~~~~~~v~~~~~--d~~ 114 (201)
T 2ift_A 55 SECLDGFAGSGSLGF----EALSR--QA--KKVTFLELDKT------VANQLKKN----LQTLKCSSEQAEVINQ--SSL 114 (201)
T ss_dssp CEEEETTCTTCHHHH----HHHHT--TC--SEEEEECSCHH------HHHHHHHH----HHHTTCCTTTEEEECS--CHH
T ss_pred CeEEEcCCccCHHHH----HHHHc--cC--CEEEEEECCHH------HHHHHHHH----HHHhCCCccceEEEEC--CHH
Confidence 478999998885322 22333 11 48999997642 24444443 344565 3555432 211
Q ss_pred cccccCccccC-CceEEEeeccccCCCCCCCccccchHHHHHHHHHh---cCCcEEEEEecCCC
Q 009376 351 DVQLENLRVQP-GEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKR---LSPKVVTLVEQESN 410 (536)
Q Consensus 351 ev~~~~L~i~~-gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~Vks---L~PkvvtlvEqEan 410 (536)
++.. .+.-.. =++|+.|.+| | . ...+.+|+.+.. |+|.-+++++-...
T Consensus 115 ~~~~-~~~~~~~fD~I~~~~~~--~-~--------~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 115 DFLK-QPQNQPHFDVVFLDPPF--H-F--------NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp HHTT-SCCSSCCEEEEEECCCS--S-S--------CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred HHHH-hhccCCCCCEEEECCCC--C-C--------ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 1100 000011 1356666553 2 1 124578888865 99998877765443
No 141
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=36.40 E-value=89 Score=28.61 Aligned_cols=102 Identities=14% Similarity=0.132 Sum_probs=51.2
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--EEEEEeecCCc
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--FEFHAANMSGY 350 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~~ 350 (536)
.-.|+|+|.+.|.-=..|.+.+ |..+||+|+.+.. .++.+.++ ++..|+. ++|.. .+..
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~-------~~~~v~~vD~~~~------~~~~a~~~----~~~~~~~~~v~~~~--~d~~ 115 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQAL-------PEATIVSIERDER------RYEEAHKH----VKALGLESRIELLF--GDAL 115 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHC-------TTCEEEEECCCHH------HHHHHHHH----HHHTTCTTTEEEEC--SCGG
T ss_pred CCEEEEecCCCcHHHHHHHHHC-------CCCEEEEEECCHH------HHHHHHHH----HHHcCCCCcEEEEE--CCHH
Confidence 3479999999885433333322 2469999997642 24443333 3445653 55533 2222
Q ss_pred cccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHH-HHhcCCcEEEEEe
Q 009376 351 DVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLML-VKRLSPKVVTLVE 406 (536)
Q Consensus 351 ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~-VksL~PkvvtlvE 406 (536)
+.-+....-.+=+.|+++... + + ...+|+. .+.|+|.-++++.
T Consensus 116 ~~~~~~~~~~~fD~I~~~~~~--~----------~-~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 116 QLGEKLELYPLFDVLFIDAAK--G----------Q-YRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp GSHHHHTTSCCEEEEEEEGGG--S----------C-HHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHhcccCCCccEEEECCCH--H----------H-HHHHHHHHHHHcCCCeEEEEE
Confidence 110000000111455555432 1 2 2345544 4778999888775
No 142
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=35.98 E-value=1.2e+02 Score=27.82 Aligned_cols=34 Identities=9% Similarity=-0.008 Sum_probs=23.2
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
+.-+|+|+|.|.|. +...|+.+. + -++||||.+.
T Consensus 60 ~~~~vLDiGcGtG~----~~~~l~~~~---~-~~v~gvD~s~ 93 (236)
T 1zx0_A 60 KGGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECND 93 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHHTSC---E-EEEEEEECCH
T ss_pred CCCeEEEEeccCCH----HHHHHHhcC---C-CeEEEEcCCH
Confidence 45689999999984 334444432 2 2899999864
No 143
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=35.66 E-value=1.2e+02 Score=30.19 Aligned_cols=107 Identities=15% Similarity=0.062 Sum_probs=53.1
Q ss_pred CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-EEEEEeecCC
Q 009376 271 EDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-FEFHAANMSG 349 (536)
Q Consensus 271 e~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF~~V~~~~ 349 (536)
...-.|+|.+.|.|.- .-.+|.+- .|..+|+|+|.+.. .++.+.+ -++..|++ .+|.. .+.
T Consensus 202 ~~~~~vLD~gcGsG~~----~ie~a~~~--~~~~~v~g~Di~~~------~i~~a~~----n~~~~g~~~i~~~~--~D~ 263 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTI----ALEAASTL--GPTSPVYAGDLDEK------RLGLARE----AALASGLSWIRFLR--ADA 263 (354)
T ss_dssp CTTCCEEESSCTTSHH----HHHHHHHH--CTTSCEEEEESCHH------HHHHHHH----HHHHTTCTTCEEEE--CCG
T ss_pred CCCCEEEeCCCCcCHH----HHHHHHhh--CCCceEEEEECCHH------HHHHHHH----HHHHcCCCceEEEe--CCh
Confidence 3445799999999862 22222221 14578999997643 2444433 34556775 44433 222
Q ss_pred ccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCc
Q 009376 350 YDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPK 400 (536)
Q Consensus 350 ~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pk 400 (536)
.++... ...-.+|+.|-++........ ....--..+++.+ +-|+|.
T Consensus 264 ~~~~~~---~~~~D~Ii~npPyg~r~~~~~--~~~~~~~~~~~~~~~~Lkpg 310 (354)
T 3tma_A 264 RHLPRF---FPEVDRILANPPHGLRLGRKE--GLFHLYWDFLRGALALLPPG 310 (354)
T ss_dssp GGGGGT---CCCCSEEEECCCSCC----CH--HHHHHHHHHHHHHHHTSCTT
T ss_pred hhCccc---cCCCCEEEECCCCcCccCCcc--cHHHHHHHHHHHHHHhcCCC
Confidence 222111 111268899988754322111 0111124566655 456774
No 144
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=35.51 E-value=42 Score=31.49 Aligned_cols=103 Identities=14% Similarity=-0.028 Sum_probs=55.1
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCccc
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDV 352 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 352 (536)
--+|+|+|.|.|. ....|+.+. | -++|||+.+. .+-++..+.++..+....|... +..++
T Consensus 61 G~rVLdiG~G~G~----~~~~~~~~~---~-~~v~~id~~~----------~~~~~a~~~~~~~~~~~~~~~~--~a~~~ 120 (236)
T 3orh_A 61 GGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECND----------GVFQRLRDWAPRQTHKVIPLKG--LWEDV 120 (236)
T ss_dssp CEEEEEECCTTSH----HHHHHTTSC---E-EEEEEEECCH----------HHHHHHHHHGGGCSSEEEEEES--CHHHH
T ss_pred CCeEEEECCCccH----HHHHHHHhC---C-cEEEEEeCCH----------HHHHHHHHHHhhCCCceEEEee--hHHhh
Confidence 3578999988883 234455542 3 3789998763 2334555567777776666432 22221
Q ss_pred cccCccccCCceEEEe---eccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEE
Q 009376 353 QLENLRVQPGEAVAVN---FAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTL 404 (536)
Q Consensus 353 ~~~~L~i~~gEaLaVN---~~~~LH~l~desv~~~n~rd~~L~~V-ksL~Pkvvtl 404 (536)
.. .+.-.+=+.+.+. +.+.++|+++ ++.+|+.+ |-|+|.-+.+
T Consensus 121 ~~-~~~~~~FD~i~~D~~~~~~~~~~~~~--------~~~~~~e~~rvLkPGG~l~ 167 (236)
T 3orh_A 121 AP-TLPDGHFDGILYDTYPLSEETWHTHQ--------FNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp GG-GSCTTCEEEEEECCCCCBGGGTTTHH--------HHHHHHTHHHHEEEEEEEE
T ss_pred cc-cccccCCceEEEeeeecccchhhhcc--------hhhhhhhhhheeCCCCEEE
Confidence 11 0110011233322 3445566543 45677644 6789987764
No 145
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=35.08 E-value=2.3e+02 Score=29.20 Aligned_cols=106 Identities=12% Similarity=0.107 Sum_probs=59.3
Q ss_pred HhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc-EEEEE
Q 009376 266 EAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP-FEFHA 344 (536)
Q Consensus 266 EA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF~~ 344 (536)
+.+.....-.|+|+|.|.|.--. .||.+ .-+++||+.+.. .++.+.++ |+..|++ .+|..
T Consensus 280 ~~l~~~~~~~VLDlgcG~G~~~~----~la~~-----~~~V~gvD~s~~------al~~A~~n----~~~~~~~~v~f~~ 340 (433)
T 1uwv_A 280 EWLDVQPEDRVLDLFCGMGNFTL----PLATQ-----AASVVGVEGVPA------LVEKGQQN----ARLNGLQNVTFYH 340 (433)
T ss_dssp HHHTCCTTCEEEEESCTTTTTHH----HHHTT-----SSEEEEEESCHH------HHHHHHHH----HHHTTCCSEEEEE
T ss_pred HhhcCCCCCEEEECCCCCCHHHH----HHHhh-----CCEEEEEeCCHH------HHHHHHHH----HHHcCCCceEEEE
Confidence 33432333479999999886443 45555 248999997643 24444433 4456764 56644
Q ss_pred eecCCccccccCccc--cCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 009376 345 ANMSGYDVQLENLRV--QPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVE 406 (536)
Q Consensus 345 V~~~~~ev~~~~L~i--~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~PkvvtlvE 406 (536)
- +..+. ...+.. ..=++|++|-+.. ..+.+++.+..++|+-++.+.
T Consensus 341 ~--d~~~~-l~~~~~~~~~fD~Vv~dPPr~-------------g~~~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 341 E--NLEED-VTKQPWAKNGFDKVLLDPARA-------------GAAGVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp C--CTTSC-CSSSGGGTTCCSEEEECCCTT-------------CCHHHHHHHHHHCCSEEEEEE
T ss_pred C--CHHHH-hhhhhhhcCCCCEEEECCCCc-------------cHHHHHHHHHhcCCCeEEEEE
Confidence 3 22221 111111 1225677663221 113688999999999998774
No 146
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=34.60 E-value=1.4e+02 Score=31.45 Aligned_cols=118 Identities=10% Similarity=0.091 Sum_probs=62.7
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHH---HHHHHHHHHhcCC-
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIV---GKRLSKLAEQFKV- 338 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~t---G~rL~~fA~s~gv- 338 (536)
.|++.+.-...-.|+|+|.|.|.+-..|.+.. +..+++||+.+... ++.+ -+.+.+-++..|+
T Consensus 233 ~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~-------g~~~V~GVDis~~~------l~~A~~Ml~~ar~~~~~~Gl~ 299 (433)
T 1u2z_A 233 DVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC-------GCALSFGCEIMDDA------SDLTILQYEELKKRCKLYGMR 299 (433)
T ss_dssp HHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH-------CCSEEEEEECCHHH------HHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC-------CCCEEEEEeCCHHH------HHHHHHhHHHHHHHHHHcCCC
Confidence 45566554455679999999987665554433 23489999976532 3333 2223444555674
Q ss_pred --cEEEEEeecCCccccccCc--cccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 009376 339 --PFEFHAANMSGYDVQLENL--RVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVE 406 (536)
Q Consensus 339 --pFeF~~V~~~~~ev~~~~L--~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~PkvvtlvE 406 (536)
.++|.. ..... ....+ ...+=++|++|..+ + . ++....+-.+.+.|+|.-.+++-
T Consensus 300 ~~nV~~i~--gD~~~-~~~~~~~~~~~FDvIvvn~~l--~-~-------~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 300 LNNVEFSL--KKSFV-DNNRVAELIPQCDVILVNNFL--F-D-------EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp CCCEEEEE--SSCST-TCHHHHHHGGGCSEEEECCTT--C-C-------HHHHHHHHHHHTTCCTTCEEEES
T ss_pred CCceEEEE--cCccc-cccccccccCCCCEEEEeCcc--c-c-------ccHHHHHHHHHHhCCCCeEEEEe
Confidence 355532 11110 00001 01233577777533 1 1 12334455666889998776653
No 147
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=34.11 E-value=2.6e+02 Score=25.07 Aligned_cols=109 Identities=17% Similarity=0.142 Sum_probs=55.4
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC-cEEEEEeecCCcc
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV-PFEFHAANMSGYD 351 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-pFeF~~V~~~~~e 351 (536)
.-.|+|+|.|.|.--. .||.+. |..++||||.+.. .++.+.++ ++..|+ .++|.. .+..+
T Consensus 42 ~~~vLDiGcG~G~~~~----~la~~~---p~~~v~gvD~s~~------~l~~a~~~----~~~~~~~~v~~~~--~d~~~ 102 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVS----GMAKQN---PDINYIGIDIQKS------VLSYALDK----VLEVGVPNIKLLW--VDGSD 102 (214)
T ss_dssp CCEEEEESCTTSHHHH----HHHHHC---TTSEEEEEESCHH------HHHHHHHH----HHHHCCSSEEEEE--CCSSC
T ss_pred CCeEEEEccCcCHHHH----HHHHHC---CCCCEEEEEcCHH------HHHHHHHH----HHHcCCCCEEEEe--CCHHH
Confidence 3469999999985333 344432 3579999997643 24444443 334455 345533 22222
Q ss_pred ccccCccccCCceEEEeeccccCCCCCCCccccch----HHHHHHHHH-hcCCcEEEEEec
Q 009376 352 VQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENY----RDRLLMLVK-RLSPKVVTLVEQ 407 (536)
Q Consensus 352 v~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~----rd~~L~~Vk-sL~PkvvtlvEq 407 (536)
+. ..+.-..=+.|++|++. ++... ...+ ...+|+.++ .|+|.-+++++-
T Consensus 103 ~~-~~~~~~~~D~i~~~~~~--~~~~~----~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 103 LT-DYFEDGEIDRLYLNFSD--PWPKK----RHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp GG-GTSCTTCCSEEEEESCC--CCCSG----GGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred HH-hhcCCCCCCEEEEECCC--Ccccc----chhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 11 01111112467777532 11100 0011 145777664 589998777753
No 148
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=33.47 E-value=64 Score=28.57 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=22.8
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
+.-.|+|+|.|.|.- ...|+.+ |+. ++||||.+.
T Consensus 42 ~~~~vLdiGcG~G~~----~~~l~~~--~~~--~v~~~D~s~ 75 (215)
T 2pxx_A 42 PEDRILVLGCGNSAL----SYELFLG--GFP--NVTSVDYSS 75 (215)
T ss_dssp TTCCEEEETCTTCSH----HHHHHHT--TCC--CEEEEESCH
T ss_pred CCCeEEEECCCCcHH----HHHHHHc--CCC--cEEEEeCCH
Confidence 345799999988753 3344444 333 899999764
No 149
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=33.44 E-value=37 Score=30.12 Aligned_cols=37 Identities=22% Similarity=0.392 Sum_probs=24.9
Q ss_pred CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCC
Q 009376 271 EDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSIS 314 (536)
Q Consensus 271 e~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s 314 (536)
.+.-+|+|+|.|.|.--..|.+ +- |..++||||.+..
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~----~~---~~~~v~~vD~~~~ 65 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIAL----AC---PGVSVTAVDLSMD 65 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHH----HC---TTEEEEEEECC--
T ss_pred CCCCEEEEecCCHhHHHHHHHH----hC---CCCeEEEEECCHH
Confidence 5567999999999964333333 31 4579999997653
No 150
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=33.05 E-value=1.1e+02 Score=29.92 Aligned_cols=112 Identities=8% Similarity=0.051 Sum_probs=56.7
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcC-CcEEEEEeecCCccc
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFK-VPFEFHAANMSGYDV 352 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g-vpFeF~~V~~~~~ev 352 (536)
-.|+|+|.|.|. +...|+.+ +|..+||+|+.+.. .++...+++..+++.++ -.++|.. .+..+.
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid~~------~i~~a~~~~~~~~~~~~~~~v~~~~--~D~~~~ 161 (304)
T 3bwc_A 97 ERVLIIGGGDGG----VLREVLRH---GTVEHCDLVDIDGE------VMEQSKQHFPQISRSLADPRATVRV--GDGLAF 161 (304)
T ss_dssp CEEEEEECTTSH----HHHHHHTC---TTCCEEEEEESCHH------HHHHHHHHCHHHHGGGGCTTEEEEE--SCHHHH
T ss_pred CeEEEEcCCCCH----HHHHHHhC---CCCCEEEEEECCHH------HHHHHHHHhHHhhcccCCCcEEEEE--CcHHHH
Confidence 479999999885 45556555 34579999997643 35666666655544332 2344433 221111
Q ss_pred cccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEec
Q 009376 353 QLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVEQ 407 (536)
Q Consensus 353 ~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvEq 407 (536)
... ..-..=++|++|... ++.++...- ...+++.+ +.|+|.-++++..
T Consensus 162 ~~~-~~~~~fDvIi~d~~~--~~~~~~~l~----~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 162 VRQ-TPDNTYDVVIIDTTD--PAGPASKLF----GEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp HHS-SCTTCEEEEEEECC-----------C----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHh-ccCCceeEEEECCCC--ccccchhhh----HHHHHHHHHHhcCCCcEEEEec
Confidence 000 000111466666533 222221110 13566665 6789988777753
No 151
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=31.76 E-value=3.2e+02 Score=25.42 Aligned_cols=114 Identities=11% Similarity=0.098 Sum_probs=56.4
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--EEEEEeecCC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--FEFHAANMSG 349 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~ 349 (536)
+.-.|+|+|.|.|. +...||.+. +. +||||+.+.. .++.+.++ ++..|+. ++|.. .+.
T Consensus 49 ~~~~vLDlG~G~G~----~~~~la~~~---~~-~v~gvDi~~~------~~~~a~~n----~~~~~~~~~v~~~~--~D~ 108 (259)
T 3lpm_A 49 RKGKIIDLCSGNGI----IPLLLSTRT---KA-KIVGVEIQER------LADMAKRS----VAYNQLEDQIEIIE--YDL 108 (259)
T ss_dssp SCCEEEETTCTTTH----HHHHHHTTC---CC-EEEEECCSHH------HHHHHHHH----HHHTTCTTTEEEEC--SCG
T ss_pred CCCEEEEcCCchhH----HHHHHHHhc---CC-cEEEEECCHH------HHHHHHHH----HHHCCCcccEEEEE--CcH
Confidence 34579999999984 444667763 22 9999997642 23333333 3445664 44433 222
Q ss_pred ccccccCccccCCceEEEeeccccC---CCCCC--Cccc-----cchHHHHHHHH-HhcCCcEEEEEe
Q 009376 350 YDVQLENLRVQPGEAVAVNFAFMLH---HVPDE--SVST-----ENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 350 ~ev~~~~L~i~~gEaLaVN~~~~LH---~l~de--sv~~-----~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
.++.. .+.-..=++|+.|-+|.-. ++... .... ....+.+++.+ +-|+|.-.+++.
T Consensus 109 ~~~~~-~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 109 KKITD-LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp GGGGG-TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHhhh-hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 22211 1111122578888776432 22111 0000 01234566655 568998777663
No 152
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=31.11 E-value=17 Score=37.85 Aligned_cols=26 Identities=38% Similarity=0.408 Sum_probs=19.4
Q ss_pred HHHHhcccCCeeEEEecccCC--ccchH
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQ--GSQWI 288 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~--G~QWp 288 (536)
||..+.+..+||=|||||+-| |+|+.
T Consensus 153 Aa~~l~~~~~RV~ivD~DvHHGnGtq~i 180 (376)
T 4a69_A 153 GILELLKYHPRVLYIDIDIHHGDGVQEA 180 (376)
T ss_dssp HHHHHTTTCSCEEEEECSSSCCHHHHHH
T ss_pred HHHHHHHhCCcEEEEeccCCCCcchhhH
Confidence 344566666999999999955 58874
No 153
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=31.04 E-value=1.8e+02 Score=26.90 Aligned_cols=48 Identities=25% Similarity=0.331 Sum_probs=31.0
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHH
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKL 332 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~f 332 (536)
+.-.|+|+|.|.|.--. .||.+- |..++||||.+.. .++.+.+++...
T Consensus 49 ~~~~vLDiGcG~G~~~~----~la~~~---~~~~v~gvD~s~~------~l~~a~~~~~~~ 96 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMI----DLSPAF---PEDLILGMEIRVQ------VTNYVEDRIIAL 96 (246)
T ss_dssp CCEEEEEETCTTSHHHH----HHHHHS---TTSEEEEEESCHH------HHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHH----HHHHhC---CCCCEEEEEcCHH------HHHHHHHHHHHH
Confidence 45689999999986433 333332 3579999997653 356666655544
No 154
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=31.01 E-value=1.8e+02 Score=30.04 Aligned_cols=43 Identities=14% Similarity=0.119 Sum_probs=30.7
Q ss_pred CeeEEEecccCCcc----chHHHHHHHhcCC----CCCCeEEEEeecCCCC
Q 009376 272 DRVHIIDFQIGQGS----QWITLIQAFAARP----GGPPHIRITGIDDSIS 314 (536)
Q Consensus 272 ~rVHIIDf~I~~G~----QWpsLiqaLA~R~----gGPP~LRITgI~~~~s 314 (536)
+.+.|.|+|.+.|- -+-.+|+++..+. ..||.++|..-|.|..
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~N 102 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSN 102 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTS
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCcc
Confidence 36999999999993 4445566555432 2468999999997754
No 155
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=30.41 E-value=4e+02 Score=27.50 Aligned_cols=95 Identities=25% Similarity=0.346 Sum_probs=55.9
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEEeecCCcccc
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHAANMSGYDVQ 353 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~ 353 (536)
-.|+|++.|.|.--. .||.+ + -+++||+.+.. .++.+.++ |+..|+..+|.. .+..++.
T Consensus 292 ~~VLDlgcG~G~~sl----~la~~--~---~~V~gvD~s~~------ai~~A~~n----~~~ngl~v~~~~--~d~~~~~ 350 (425)
T 2jjq_A 292 EKILDMYSGVGTFGI----YLAKR--G---FNVKGFDSNEF------AIEMARRN----VEINNVDAEFEV--ASDREVS 350 (425)
T ss_dssp SEEEEETCTTTHHHH----HHHHT--T---CEEEEEESCHH------HHHHHHHH----HHHHTCCEEEEE--CCTTTCC
T ss_pred CEEEEeeccchHHHH----HHHHc--C---CEEEEEECCHH------HHHHHHHH----HHHcCCcEEEEE--CChHHcC
Confidence 378999998886333 45554 2 28999997643 24444433 344567655543 3333321
Q ss_pred ccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 009376 354 LENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVE 406 (536)
Q Consensus 354 ~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~VksL~PkvvtlvE 406 (536)
.. .=++|++|-+. . ...+.+++.++.|+|+-++.+.
T Consensus 351 ~~-----~fD~Vv~dPPr-------~-----g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 351 VK-----GFDTVIVDPPR-------A-----GLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp CT-----TCSEEEECCCT-------T-----CSCHHHHHHHHHHCCSEEEEEE
T ss_pred cc-----CCCEEEEcCCc-------c-----chHHHHHHHHHhcCCCcEEEEE
Confidence 11 23467766431 1 1124689999999999988875
No 156
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=29.80 E-value=1.6e+02 Score=29.58 Aligned_cols=134 Identities=13% Similarity=0.147 Sum_probs=67.9
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhc-CCcEEEEEeecCCccc
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQF-KVPFEFHAANMSGYDV 352 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~-gvpFeF~~V~~~~~ev 352 (536)
-+|+|+|.|.|. +...|+.+ +|..+||+|+.+.. .++...+++..++..+ +-.++|..- +..+.
T Consensus 122 ~~VLdIG~G~G~----~a~~la~~---~~~~~V~~VDis~~------~l~~Ar~~~~~~~~gl~~~rv~~~~~--D~~~~ 186 (334)
T 1xj5_A 122 KKVLVIGGGDGG----VLREVARH---ASIEQIDMCEIDKM------VVDVSKQFFPDVAIGYEDPRVNLVIG--DGVAF 186 (334)
T ss_dssp CEEEEETCSSSH----HHHHHTTC---TTCCEEEEEESCHH------HHHHHHHHCHHHHGGGGSTTEEEEES--CHHHH
T ss_pred CEEEEECCCccH----HHHHHHHc---CCCCEEEEEECCHH------HHHHHHHHHHhhccccCCCcEEEEEC--CHHHH
Confidence 479999999886 45566655 35679999997643 3566666665554323 123555332 21111
Q ss_pred cccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEecCCCCCCCCchHHHHHHHHHHHHHH
Q 009376 353 QLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVEQESNTNTAAFYPRFLEALNYYTAMF 431 (536)
Q Consensus 353 ~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvEqEan~N~~~F~~RF~EaL~yYsAlF 431 (536)
+..+.-..=++|++|+....+.. + .. ....+++.+ +.|+|.-++++.-+.-... ...+.+.+.-...+|
T Consensus 187 -l~~~~~~~fDlIi~d~~~p~~~~-~-~l----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~---~~~~~~~~~~l~~~F 256 (334)
T 1xj5_A 187 -LKNAAEGSYDAVIVDSSDPIGPA-K-EL----FEKPFFQSVARALRPGGVVCTQAESLWLH---MDIIEDIVSNCREIF 256 (334)
T ss_dssp -HHTSCTTCEEEEEECCCCTTSGG-G-GG----GSHHHHHHHHHHEEEEEEEEEECCCTTTC---HHHHHHHHHHHHHHC
T ss_pred -HHhccCCCccEEEECCCCccCcc-h-hh----hHHHHHHHHHHhcCCCcEEEEecCCcccc---HHHHHHHHHHHHHhC
Confidence 00010011146666654222211 1 00 013556555 6789998888863332221 123444444445555
Q ss_pred H
Q 009376 432 E 432 (536)
Q Consensus 432 D 432 (536)
.
T Consensus 257 ~ 257 (334)
T 1xj5_A 257 K 257 (334)
T ss_dssp S
T ss_pred c
Confidence 5
No 157
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=29.00 E-value=3.2e+02 Score=27.40 Aligned_cols=110 Identities=17% Similarity=0.177 Sum_probs=57.1
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC--cEEEEEeecCC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV--PFEFHAANMSG 349 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--pFeF~~V~~~~ 349 (536)
..-.|+|.+.|.|. +.-.+|.+- +.-+|+|+|-+.. .++.+.++ ++..|+ ..+|..-..
T Consensus 217 ~~~~vLD~gCGsG~----~~i~~a~~~---~~~~v~g~Dis~~------~l~~A~~n----~~~~gl~~~i~~~~~D~-- 277 (373)
T 3tm4_A 217 DGGSVLDPMCGSGT----ILIELALRR---YSGEIIGIEKYRK------HLIGAEMN----ALAAGVLDKIKFIQGDA-- 277 (373)
T ss_dssp CSCCEEETTCTTCH----HHHHHHHTT---CCSCEEEEESCHH------HHHHHHHH----HHHTTCGGGCEEEECCG--
T ss_pred CCCEEEEccCcCcH----HHHHHHHhC---CCCeEEEEeCCHH------HHHHHHHH----HHHcCCCCceEEEECCh--
Confidence 34568999999885 333444442 1337999997643 24444444 445576 456644322
Q ss_pred ccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHHHh-cCCcEEEEE
Q 009376 350 YDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKR-LSPKVVTLV 405 (536)
Q Consensus 350 ~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~Vks-L~Pkvvtlv 405 (536)
.++... ...=.+|+.|-+|... +.+.. .....-..+++.++. |++++++++
T Consensus 278 ~~~~~~---~~~fD~Ii~npPyg~r-~~~~~-~~~~ly~~~~~~l~r~l~g~~~~i~ 329 (373)
T 3tm4_A 278 TQLSQY---VDSVDFAISNLPYGLK-IGKKS-MIPDLYMKFFNELAKVLEKRGVFIT 329 (373)
T ss_dssp GGGGGT---CSCEEEEEEECCCC-------C-CHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhCCcc---cCCcCEEEECCCCCcc-cCcch-hHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 222111 1122578888887642 21111 112223567777776 666666654
No 158
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=28.40 E-value=2.4e+02 Score=25.68 Aligned_cols=34 Identities=12% Similarity=0.044 Sum_probs=22.6
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.-.|+|+|.|.|.-- ..||.+-+ .-+++||+.+.
T Consensus 75 ~~~VLDlGcG~G~~~----~~la~~~~---~~~v~gvD~s~ 108 (230)
T 1fbn_A 75 DSKILYLGASAGTTP----SHVADIAD---KGIVYAIEYAP 108 (230)
T ss_dssp TCEEEEESCCSSHHH----HHHHHHTT---TSEEEEEESCH
T ss_pred CCEEEEEcccCCHHH----HHHHHHcC---CcEEEEEECCH
Confidence 347999999988633 33444422 34899999764
No 159
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=27.90 E-value=1.7e+02 Score=28.09 Aligned_cols=135 Identities=13% Similarity=0.126 Sum_probs=70.6
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC-cEEEEEeecCCcc
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV-PFEFHAANMSGYD 351 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-pFeF~~V~~~~~e 351 (536)
.-+|+|+|.|.|. +...++.++ |.-+||+|+-+.. .++...+.+.+++..++- .++++ ..+..+
T Consensus 76 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vEid~~------~v~~ar~~~~~~~~~~~~~rv~v~--~~D~~~ 140 (275)
T 1iy9_A 76 PEHVLVVGGGDGG----VIREILKHP---SVKKATLVDIDGK------VIEYSKKFLPSIAGKLDDPRVDVQ--VDDGFM 140 (275)
T ss_dssp CCEEEEESCTTCH----HHHHHTTCT---TCSEEEEEESCHH------HHHHHHHHCHHHHTTTTSTTEEEE--ESCSHH
T ss_pred CCEEEEECCchHH----HHHHHHhCC---CCceEEEEECCHH------HHHHHHHHhHhhccccCCCceEEE--ECcHHH
Confidence 3579999999884 445566553 4579999997642 355666666555433321 23443 222221
Q ss_pred -ccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEecCCCCCCCCc-hHHHHHHHHHHH
Q 009376 352 -VQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVEQESNTNTAAF-YPRFLEALNYYT 428 (536)
Q Consensus 352 -v~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvEqEan~N~~~F-~~RF~EaL~yYs 428 (536)
+.. .. ..=++|+++... +..+.+..- ...|++.+ +.|+|.-++++.... +.+ .+.+.+.+....
T Consensus 141 ~l~~--~~-~~fD~Ii~d~~~--~~~~~~~l~----~~~~~~~~~~~L~pgG~lv~~~~~----~~~~~~~~~~~~~~l~ 207 (275)
T 1iy9_A 141 HIAK--SE-NQYDVIMVDSTE--PVGPAVNLF----TKGFYAGIAKALKEDGIFVAQTDN----PWFTPELITNVQRDVK 207 (275)
T ss_dssp HHHT--CC-SCEEEEEESCSS--CCSCCCCCS----TTHHHHHHHHHEEEEEEEEEECCC----TTTCHHHHHHHHHHHH
T ss_pred HHhh--CC-CCeeEEEECCCC--CCCcchhhh----HHHHHHHHHHhcCCCcEEEEEcCC----ccccHHHHHHHHHHHH
Confidence 110 00 122466666543 222211111 13455554 679999888886322 212 455666666666
Q ss_pred HHHHhhh
Q 009376 429 AMFESID 435 (536)
Q Consensus 429 AlFDSLD 435 (536)
.+|....
T Consensus 208 ~~F~~v~ 214 (275)
T 1iy9_A 208 EIFPITK 214 (275)
T ss_dssp TTCSEEE
T ss_pred HhCCCeE
Confidence 6665443
No 160
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=27.53 E-value=39 Score=28.37 Aligned_cols=43 Identities=16% Similarity=0.215 Sum_probs=32.9
Q ss_pred CCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEE
Q 009376 299 GGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFH 343 (536)
Q Consensus 299 gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~ 343 (536)
=|||.-|||........ -...|+++-+.+.+..+..|..|+|+
T Consensus 49 vgaP~Y~i~~~~~D~k~--ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 49 IGAPRYRVDVVGTNPKE--ASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp SSTTEEEEEEEESCHHH--HHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred EcCCeEEEEEEecCHHH--HHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 37898888887765321 12358889999999999999999985
No 161
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=27.31 E-value=22 Score=37.26 Aligned_cols=25 Identities=16% Similarity=0.296 Sum_probs=19.0
Q ss_pred HHHhcccCCeeEEEecccCC--ccchH
Q 009376 264 IAEAMKDEDRVHIIDFQIGQ--GSQWI 288 (536)
Q Consensus 264 ILEA~~ge~rVHIIDf~I~~--G~QWp 288 (536)
|..+.++.+||=|||||+-+ |+|+.
T Consensus 162 a~~l~~~~~RV~ivD~DvHHGnGtq~i 188 (388)
T 3ew8_A 162 ILRLRRKFERILYVDLDLHHGDGVEDA 188 (388)
T ss_dssp HHHHTTTCSCEEEEECSSSCCHHHHHH
T ss_pred HHHHHhcCCeEEEEecCCCCChhHHHH
Confidence 45555667899999999955 57865
No 162
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=27.16 E-value=1.1e+02 Score=30.08 Aligned_cols=43 Identities=9% Similarity=0.087 Sum_probs=28.9
Q ss_pred CeeEEEecccCCccchHHHHHHHhcC-CCCCCeEEEEeecCCCC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAAR-PGGPPHIRITGIDDSIS 314 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R-~gGPP~LRITgI~~~~s 314 (536)
+.+.|.|.|.+.|.---+|--.|+.. +..+...+|+|+|-+..
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~ 148 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTE 148 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHH
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHH
Confidence 46899999999997544454445543 22222479999998753
No 163
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=27.05 E-value=2e+02 Score=28.41 Aligned_cols=100 Identities=15% Similarity=0.127 Sum_probs=49.9
Q ss_pred hcCCcchhhh-hhhcHHHH----HhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChH
Q 009376 248 EVCPYFKFGY-MSANGAIA----EAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGL 322 (536)
Q Consensus 248 e~~P~~kFa~-~tANqAIL----EA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L 322 (536)
.+-|=-+||. |..+..|+ +++.-.+.-+|+|+|.|.|..-..|.+ + + -++|||+.+.. .+
T Consensus 21 ~~~~~k~~GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~----~-~----~~V~aVEid~~------li 85 (295)
T 3gru_A 21 MFKPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAK----N-A----KKVYVIEIDKS------LE 85 (295)
T ss_dssp ---------CCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHH----H-S----SEEEEEESCGG------GH
T ss_pred CCCCccccCccccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHh----c-C----CEEEEEECCHH------HH
Confidence 3456666776 55555544 444444556899999999875444444 3 1 37999997653 24
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEeecCCccccccCccccCCceEEEeeccc
Q 009376 323 GIVGKRLSKLAEQFKVPFEFHAANMSGYDVQLENLRVQPGEAVAVNFAFM 372 (536)
Q Consensus 323 ~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~ 372 (536)
+...+++. ..+ .++| +..+..++.... .+-.+|+.|.++.
T Consensus 86 ~~a~~~~~----~~~-~v~v--i~gD~l~~~~~~---~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 86 PYANKLKE----LYN-NIEI--IWGDALKVDLNK---LDFNKVVANLPYQ 125 (295)
T ss_dssp HHHHHHHH----HCS-SEEE--EESCTTTSCGGG---SCCSEEEEECCGG
T ss_pred HHHHHHhc----cCC-CeEE--EECchhhCCccc---CCccEEEEeCccc
Confidence 44444443 111 3333 333333332222 1235788887764
No 164
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=26.98 E-value=1e+02 Score=30.49 Aligned_cols=118 Identities=16% Similarity=0.141 Sum_probs=63.5
Q ss_pred hcHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc
Q 009376 260 ANGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP 339 (536)
Q Consensus 260 ANqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp 339 (536)
....|++.+.....-+|+|+|.|.|.--.. |+.+ + |..++||||.+.. .++.+.+++ +..|+.
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~----la~~--~-~~~~v~~vD~s~~------~l~~a~~~~----~~~~~~ 246 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVA----FARH--S-PKIRLTLCDVSAP------AVEASRATL----AANGVE 246 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHH----HHHH--C-TTCBCEEEESBHH------HHHHHHHHH----HHTTCC
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHH----HHHH--C-CCCEEEEEECCHH------HHHHHHHHH----HHhCCC
Confidence 357788888543344799999998864333 3333 1 4568999997642 244444443 345666
Q ss_pred EEEEEeecCCccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 340 FEFHAANMSGYDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 340 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
.+|. ..+..+... ..=+.|+.|.+ +|+-... . ......+|+.+ +.|+|.-..++.
T Consensus 247 ~~~~--~~d~~~~~~-----~~fD~Iv~~~~--~~~g~~~--~-~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 247 GEVF--ASNVFSEVK-----GRFDMIISNPP--FHDGMQT--S-LDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp CEEE--ECSTTTTCC-----SCEEEEEECCC--CCSSSHH--H-HHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CEEE--Ecccccccc-----CCeeEEEECCC--cccCccC--C-HHHHHHHHHHHHHhCCCCcEEEEE
Confidence 6663 222211110 11135666654 4542110 0 12245566665 668998776553
No 165
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=26.59 E-value=74 Score=28.71 Aligned_cols=36 Identities=22% Similarity=0.181 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhhccCCCCCh
Q 009376 166 LKHVLIACAKAVSENELLLANWLMYELRQMVSVSGEP 202 (536)
Q Consensus 166 L~~LLl~CA~AV~~gd~~~A~~lL~~L~~laS~~Gdp 202 (536)
+=+-|-+|++|++.||+..|+.||.... +.-|+||-
T Consensus 58 IW~ALraA~~~~e~~Dl~tAQ~IldaAg-Itvp~gdL 93 (137)
T 2ksn_A 58 IWDALKAAAHAFESNDHELAQAIIDGAN-ITLPHGAL 93 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHS-CBCSSCCS
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHcC-CcccCCcH
Confidence 3456788999999999999999997664 55677863
No 166
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=26.47 E-value=2.6e+02 Score=23.81 Aligned_cols=37 Identities=22% Similarity=0.286 Sum_probs=24.1
Q ss_pred cccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 268 MKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 268 ~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
+.-.+.-+|+|+|.|.|. +...|+.+- .++|||+.+.
T Consensus 29 ~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~~~ 65 (192)
T 1l3i_A 29 AEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDRNP 65 (192)
T ss_dssp HCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEESCH
T ss_pred cCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEECCH
Confidence 333344589999998874 333444442 5899999764
No 167
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=26.30 E-value=83 Score=30.40 Aligned_cols=42 Identities=12% Similarity=0.206 Sum_probs=29.6
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.|++++.-.+.-+|+|+|-|.|. |-..|+.+. -++|||+.+.
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G~----lt~~La~~~-----~~V~avEid~ 61 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRGA----LTDYLLTEC-----DNLALVEIDR 61 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTTT----THHHHTTTS-----SEEEEEECCH
T ss_pred HHHHhcCCCCcCEEEEEcccccH----HHHHHHHhC-----CEEEEEECCH
Confidence 35566654555689999999886 455666662 3899999764
No 168
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=26.14 E-value=2.1e+02 Score=26.23 Aligned_cols=45 Identities=16% Similarity=0.141 Sum_probs=30.0
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.|++.+.-.+.-.|+|+|.|.|.--..|.+.+ .|..+++|||.+.
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~------~~~~~v~~~D~~~ 128 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIV------GPEGRVVSYEIRE 128 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEECSCH
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHh------CCCeEEEEEecCH
Confidence 55666655555689999999986444444433 1346899999764
No 169
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=25.87 E-value=2.4e+02 Score=26.61 Aligned_cols=45 Identities=20% Similarity=0.255 Sum_probs=28.0
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.|++.+.-...-.|+|+|.|.|.--. .|+.+-+ |..++|+|+.+.
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~~~~----~la~~~~--~~~~v~~vD~s~ 147 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGAMCA----VLARAVG--SSGKVFAYEKRE 147 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHH----HHHHHTT--TTCEEEEECCCH
T ss_pred HHHHHhCCCCCCEEEEECCcCCHHHH----HHHHHhC--CCcEEEEEECCH
Confidence 45555554444589999999885333 3333311 345999999754
No 170
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=25.87 E-value=1.1e+02 Score=26.40 Aligned_cols=49 Identities=16% Similarity=0.309 Sum_probs=35.4
Q ss_pred EEEecccC-CccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcE
Q 009376 275 HIIDFQIG-QGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPF 340 (536)
Q Consensus 275 HIIDf~I~-~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpF 340 (536)
=|||++-. ...+|..|++.|..+ .|++-||..... .++.+.|+..|+|+
T Consensus 50 VVlDl~~l~~~~dl~~L~~~l~~~-----gl~~vGV~g~~~------------~~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 50 VVINVSGLESPVNWPELHKIVTST-----GLRIIGVSGCKD------------ASLKVEIDRMGLPL 99 (120)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHTT-----TCEEEEEESCCC------------HHHHHHHHHHTCCE
T ss_pred EEEEccccCChHHHHHHHHHHHHc-----CCEEEEEeCCCc------------HHHHHHHHHCCCCc
Confidence 37888743 457999999999877 388888875322 23456788889985
No 171
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=25.73 E-value=1.2e+02 Score=29.61 Aligned_cols=46 Identities=20% Similarity=0.289 Sum_probs=30.6
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.|++++.-.+.-+|+|+|.|.|.-=..|.+.... ...++|||+-+.
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~-----~~~~V~avDid~ 78 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLGALTGPVIARLAT-----PGSPLHAVELDR 78 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCB-----TTBCEEEEECCH
T ss_pred HHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCC-----cCCeEEEEECCH
Confidence 3555655455668999999999866555554311 135699999764
No 172
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=25.01 E-value=4.1e+02 Score=25.87 Aligned_cols=64 Identities=14% Similarity=0.019 Sum_probs=38.2
Q ss_pred hcHHHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc
Q 009376 260 ANGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP 339 (536)
Q Consensus 260 ANqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp 339 (536)
+-+.+.+++.-...-.|+|+|.+.|.--..|.+.+ ++.-+|||||.+.. .++.+.++ ++..|++
T Consensus 106 ~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~------~~~~~v~avD~s~~------~l~~a~~~----~~~~g~~ 169 (315)
T 1ixk_A 106 SSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLM------RNDGVIYAFDVDEN------RLRETRLN----LSRLGVL 169 (315)
T ss_dssp HHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHT------TTCSEEEEECSCHH------HHHHHHHH----HHHHTCC
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHh------CCCCEEEEEcCCHH------HHHHHHHH----HHHhCCC
Confidence 33444555554455579999999987544444433 23458999997642 24444444 4455763
No 173
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=24.67 E-value=3.6e+02 Score=24.14 Aligned_cols=42 Identities=7% Similarity=0.111 Sum_probs=26.7
Q ss_pred HHHHhcccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 263 AIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 263 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.|++.+.-.+.-+|+|+|.|.|.--..| +.+- -++|||+.+.
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l----~~~~-----~~v~~vD~~~ 102 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTALI----AEIV-----DKVVSVEINE 102 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHH----HHHS-----SEEEEEESCH
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHHHH----HHHc-----CEEEEEeCCH
Confidence 4445554444558999999988644333 3331 4899999764
No 174
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=24.50 E-value=1.5e+02 Score=27.57 Aligned_cols=60 Identities=12% Similarity=0.108 Sum_probs=35.3
Q ss_pred cccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc---EEEE
Q 009376 268 MKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP---FEFH 343 (536)
Q Consensus 268 ~~ge~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp---FeF~ 343 (536)
....+.-+|+|+|.+.|.-=..|.+++ ||.-+||+|+.+.. .++.+ .+.++..|+. ++|.
T Consensus 52 ~~~~~~~~vLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~~~------~~~~a----~~~~~~~g~~~~~i~~~ 114 (221)
T 3dr5_A 52 TNGNGSTGAIAITPAAGLVGLYILNGL------ADNTTLTCIDPESE------HQRQA----KALFREAGYSPSRVRFL 114 (221)
T ss_dssp SCCTTCCEEEEESTTHHHHHHHHHHHS------CTTSEEEEECSCHH------HHHHH----HHHHHHTTCCGGGEEEE
T ss_pred hCCCCCCCEEEEcCCchHHHHHHHHhC------CCCCEEEEEECCHH------HHHHH----HHHHHHcCCCcCcEEEE
Confidence 333445589999988876544444443 23469999997642 23333 3344556765 5554
No 175
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=24.00 E-value=2.5e+02 Score=25.11 Aligned_cols=36 Identities=17% Similarity=0.102 Sum_probs=23.3
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
+.-+|+|+|.+.|.--. .||.+- |+..++|+|+.+.
T Consensus 58 ~~~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~~ 93 (223)
T 3duw_A 58 GARNILEIGTLGGYSTI----WLARGL--SSGGRVVTLEASE 93 (223)
T ss_dssp TCSEEEEECCTTSHHHH----HHHTTC--CSSCEEEEEESCH
T ss_pred CCCEEEEecCCccHHHH----HHHHhC--CCCCEEEEEECCH
Confidence 34579999998885433 344432 3356999999754
No 176
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=23.86 E-value=87 Score=26.59 Aligned_cols=31 Identities=16% Similarity=0.125 Sum_probs=21.5
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
-+|+|+|.|.|. +...|+.+ |+ . +||||.+.
T Consensus 43 ~~vLD~GcG~G~----~~~~l~~~--~~-~--v~~vD~~~ 73 (171)
T 1ws6_A 43 GRFLDPFAGSGA----VGLEAASE--GW-E--AVLVEKDP 73 (171)
T ss_dssp CEEEEETCSSCH----HHHHHHHT--TC-E--EEEECCCH
T ss_pred CeEEEeCCCcCH----HHHHHHHC--CC-e--EEEEeCCH
Confidence 479999999985 33445554 33 3 99999764
No 177
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=23.65 E-value=5e+02 Score=25.84 Aligned_cols=97 Identities=9% Similarity=0.056 Sum_probs=49.0
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCC-cEEEEEeecCCcc
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKV-PFEFHAANMSGYD 351 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-pFeF~~V~~~~~e 351 (536)
-=+|+|+|.|-|. ...++ ||..++ -++||||.+.. .++.+.+++ +..|+ .++|.. .+..+
T Consensus 123 g~rVLDIGcG~G~-~ta~~--lA~~~g----a~V~gIDis~~------~l~~Ar~~~----~~~gl~~v~~v~--gDa~~ 183 (298)
T 3fpf_A 123 GERAVFIGGGPLP-LTGIL--LSHVYG----MRVNVVEIEPD------IAELSRKVI----EGLGVDGVNVIT--GDETV 183 (298)
T ss_dssp TCEEEEECCCSSC-HHHHH--HHHTTC----CEEEEEESSHH------HHHHHHHHH----HHHTCCSEEEEE--SCGGG
T ss_pred cCEEEEECCCccH-HHHHH--HHHccC----CEEEEEECCHH------HHHHHHHHH----HhcCCCCeEEEE--Cchhh
Confidence 3477888887653 33332 344443 48999997642 244444433 33354 355533 22222
Q ss_pred ccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 352 VQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 352 v~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
+. -.+=++|.++.. . .+ ...+|+.+ +.|+|.-.+++.
T Consensus 184 l~-----d~~FDvV~~~a~-----~-------~d-~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 184 ID-----GLEFDVLMVAAL-----A-------EP-KRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp GG-----GCCCSEEEECTT-----C-------SC-HHHHHHHHHHHCCTTCEEEEE
T ss_pred CC-----CCCcCEEEECCC-----c-------cC-HHHHHHHHHHHcCCCcEEEEE
Confidence 21 111234544321 1 12 34455544 779998777664
No 178
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=23.53 E-value=83 Score=27.66 Aligned_cols=29 Identities=17% Similarity=0.365 Sum_probs=22.2
Q ss_pred EEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 275 HIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 275 HIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.|+|+|.|.|. +...|+.+- ++||||.+.
T Consensus 26 ~vLD~GcG~G~----~~~~l~~~~------~v~gvD~s~ 54 (170)
T 3q87_B 26 IVLDLGTSTGV----ITEQLRKRN------TVVSTDLNI 54 (170)
T ss_dssp EEEEETCTTCH----HHHHHTTTS------EEEEEESCH
T ss_pred eEEEeccCccH----HHHHHHhcC------cEEEEECCH
Confidence 89999999984 445566552 999999764
No 179
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=23.28 E-value=2e+02 Score=26.31 Aligned_cols=35 Identities=17% Similarity=-0.007 Sum_probs=23.1
Q ss_pred CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 271 EDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 271 e~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.+.-.|+|+|.|.|.-=. .|+.+ ++ .++||||.+.
T Consensus 55 ~~~~~vLDlGcG~G~~~~----~l~~~--~~--~~v~gvD~s~ 89 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQL----LSACE--SF--TEIIVSDYTD 89 (265)
T ss_dssp CCEEEEEEESCTTCCGGG----TTGGG--TE--EEEEEEESCH
T ss_pred cCCCEEEEECCCccHHHH----HHhhc--cc--CeEEEecCCH
Confidence 456789999999884322 23332 22 6999999864
No 180
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=23.00 E-value=1.6e+02 Score=27.15 Aligned_cols=102 Identities=9% Similarity=0.135 Sum_probs=52.9
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--EEEEEeecCC
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--FEFHAANMSG 349 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~ 349 (536)
+.-.|+|+|.+.|.--. .||... |..++|+|+.+.. .++.+.+ .++..|++ .+|..- +.
T Consensus 71 ~~~~vLDiG~G~G~~~~----~la~~~---~~~~v~~vD~~~~------~~~~a~~----~~~~~~~~~~v~~~~~--d~ 131 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSM----QFASIS---DDIHVTTIERNET------MIQYAKQ----NLATYHFENQVRIIEG--NA 131 (232)
T ss_dssp TCCEEEEECCSSSHHHH----HHHTTC---TTCEEEEEECCHH------HHHHHHH----HHHHTTCTTTEEEEES--CG
T ss_pred CCCEEEEEeCchhHHHH----HHHHhC---CCCEEEEEECCHH------HHHHHHH----HHHHcCCCCcEEEEEC--CH
Confidence 44589999999885333 344321 3579999997642 2444433 34456663 555432 22
Q ss_pred ccccccCccccCCceEEEeeccccCCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 009376 350 YDVQLENLRVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLV-KRLSPKVVTLVE 406 (536)
Q Consensus 350 ~ev~~~~L~i~~gEaLaVN~~~~LH~l~desv~~~n~rd~~L~~V-ksL~PkvvtlvE 406 (536)
.+.-++.+ -.+=+.|+++.. ..+ ...+|+.+ +.|+|.-+++++
T Consensus 132 ~~~~~~~~-~~~fD~V~~~~~------------~~~-~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 132 LEQFENVN-DKVYDMIFIDAA------------KAQ-SKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp GGCHHHHT-TSCEEEEEEETT------------SSS-HHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHhhc-cCCccEEEEcCc------------HHH-HHHHHHHHHHhcCCCeEEEEe
Confidence 22111001 011134444421 012 33466555 778999998885
No 181
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=22.94 E-value=1.2e+02 Score=28.69 Aligned_cols=52 Identities=23% Similarity=0.214 Sum_probs=32.1
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEE
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFH 343 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~ 343 (536)
.-.|+|+|.|.|. +..+++.+ |+ ++||||.+.. .++.+.++ ++..|+.++|.
T Consensus 121 ~~~VLDiGcG~G~----l~~~la~~--g~---~v~gvDi~~~------~v~~a~~n----~~~~~~~v~~~ 172 (254)
T 2nxc_A 121 GDKVLDLGTGSGV----LAIAAEKL--GG---KALGVDIDPM------VLPQAEAN----AKRNGVRPRFL 172 (254)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCGG------GHHHHHHH----HHHTTCCCEEE
T ss_pred CCEEEEecCCCcH----HHHHHHHh--CC---eEEEEECCHH------HHHHHHHH----HHHcCCcEEEE
Confidence 3479999998886 33345554 43 9999997653 25555443 34456664443
No 182
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=22.20 E-value=32 Score=35.75 Aligned_cols=25 Identities=24% Similarity=0.290 Sum_probs=18.4
Q ss_pred HHHhcccCCeeEEEecccCC--ccchH
Q 009376 264 IAEAMKDEDRVHIIDFQIGQ--GSQWI 288 (536)
Q Consensus 264 ILEA~~ge~rVHIIDf~I~~--G~QWp 288 (536)
|..+.+..+||=|||||+-+ |+|+.
T Consensus 197 a~~l~~~~~RV~ivD~DvHHGnGtq~i 223 (362)
T 3men_A 197 AQALRARHARVAVLDTDMHHGQGIQEI 223 (362)
T ss_dssp HHHHTTTCSCEEEEECSSSCCHHHHHH
T ss_pred HHHHHHcCCeEEEEeCcCCCchhHhHH
Confidence 34455556999999999955 58875
No 183
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=22.20 E-value=1.9e+02 Score=26.74 Aligned_cols=56 Identities=13% Similarity=0.028 Sum_probs=35.8
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--EEEEE
Q 009376 272 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--FEFHA 344 (536)
Q Consensus 272 ~rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~ 344 (536)
+.-+|+|+|.|.|.--..|.+.. |..++||||.+.. .++.+.++ ++..|+. ++|..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-------~~~~v~gvD~s~~------~~~~a~~~----~~~~~~~~~v~~~~ 122 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-------NGWYFLATEVDDM------CFNYAKKN----VEQNNLSDLIKVVK 122 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-------HCCEEEEEESCHH------HHHHHHHH----HHHTTCTTTEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-------CCCeEEEEECCHH------HHHHHHHH----HHHcCCCccEEEEE
Confidence 34589999999997666555543 2368999997642 24444443 3445664 66654
No 184
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=21.71 E-value=2.6e+02 Score=25.04 Aligned_cols=55 Identities=15% Similarity=0.108 Sum_probs=33.0
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCCcccCCChHHHHHHHHHHHHHhcCCc--EEEEE
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSISAYARGGGLGIVGKRLSKLAEQFKVP--FEFHA 344 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~ 344 (536)
-+|+|+|.+.|.--. .|+.+- |+..+||+|+.+.. .++.+.+ .++..|+. ++|..
T Consensus 66 ~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~~~------~~~~a~~----~~~~~~~~~~v~~~~ 122 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAI----AMGLAL--PKDGTLITCDVDEK------STALAKE----YWEKAGLSDKIGLRL 122 (225)
T ss_dssp SEEEEECCTTSHHHH----HHHTTC--CTTCEEEEEESCHH------HHHHHHH----HHHHTTCTTTEEEEE
T ss_pred CEEEEeCCcchHHHH----HHHHhC--CCCCEEEEEeCCHH------HHHHHHH----HHHHCCCCCceEEEe
Confidence 489999999886433 344432 23579999997642 2444433 34455664 56544
No 185
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A
Probab=20.70 E-value=28 Score=35.26 Aligned_cols=63 Identities=17% Similarity=0.072 Sum_probs=38.1
Q ss_pred eEEEecccCCccchHHHHHHHhcCCC-CC-CeEEEE-eecCCCCcccCCChHHHHHHHHHHHHHhcCCcEEEEE
Q 009376 274 VHIIDFQIGQGSQWITLIQAFAARPG-GP-PHIRIT-GIDDSISAYARGGGLGIVGKRLSKLAEQFKVPFEFHA 344 (536)
Q Consensus 274 VHIIDf~I~~G~QWpsLiqaLA~R~g-GP-P~LRIT-gI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~ 344 (536)
+.=|||||-.|..+-.+.++|+.-.. +| ..|-+| ++.+. ++...|..+.+-|...|+.|.+--
T Consensus 112 ldGIDfDiE~~~~~d~~~~aL~~l~~~~p~~~vs~TL~~~p~--------gl~~~g~~~l~~a~~~g~~ld~Vn 177 (311)
T 2dsk_A 112 ATYLDFDIEAGIDADKLADALLIVQRERPWVKFSFTLPSDPG--------IGLAGGYGIIETMAKKGVRVDRVN 177 (311)
T ss_dssp CSEEEEEECSCCCHHHHHHHHHHHHHHSTTCEEEEEEEEETT--------TEESTHHHHHHHHHHHTCCCCEEE
T ss_pred CCcEEEeccCCccHHHHHHHHHHHHhhCCCcEEEEEeccCCC--------CCCcchHHHHHHHHHcCccccEEE
Confidence 34689999999888888888865322 22 234444 23321 122244556666888888776643
No 186
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=20.62 E-value=4.7e+02 Score=23.60 Aligned_cols=35 Identities=11% Similarity=0.137 Sum_probs=22.4
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 009376 273 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSI 313 (536)
Q Consensus 273 rVHIIDf~I~~G~QWpsLiqaLA~R~gGPP~LRITgI~~~~ 313 (536)
.-+|+|+|.|.|.-=. .|+.+-+ |.-+++|||.+.
T Consensus 78 ~~~vLDlG~G~G~~~~----~la~~~g--~~~~v~gvD~s~ 112 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVS----HVSDIVG--PDGLVYAVEFSH 112 (233)
T ss_dssp TCEEEEECCTTSHHHH----HHHHHHC--TTCEEEEECCCH
T ss_pred CCEEEEEcccCCHHHH----HHHHHhC--CCcEEEEEECCH
Confidence 3479999999986333 3333321 234899998753
Done!