BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009382
(536 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 320 bits (820), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 176/456 (38%), Positives = 261/456 (57%), Gaps = 20/456 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + LG+G +G + LC + TG++ A K ++KR++ KTD++ + REVQ+++ L P
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 86
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI++ +ED + ++V E+ GELFD II++ +SE AA + R ++ + H
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRYGK 248
+VHRDLKPEN L S ++A +++ DFG S FE K +D +G+AYY+APEVL Y +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 206
Query: 249 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRML 308
+ D+WS GVILYILLSG PPF E I + +G F+ W +S AKDL+R+ML
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 266
Query: 309 TQDPKKRITAAEVLEHPWLKESGK---ASDKPIDTAVIFRMKQFRAMNKLKKLALKVIVE 365
T P RI+A + L+H W++ K + D P I ++QF+ KL + AL +
Sbjct: 267 TYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGS 326
Query: 366 NLPTE-EIQKLKEKFTEMDTDNNGTLSYDELKAGLAKL-------GSML----TESDIKQ 413
L ++ E ++L F +MD + +G L EL G +L SML E ++ Q
Sbjct: 327 KLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQ 386
Query: 414 YMQAADIDGNGTIDYIEFITATMQRHKLERFEHLYKAFQYFDKDNSGYITVDELETAFKE 473
+ A D D NG I+Y EF+T M R L E L +AF+ FD DNSG I+ EL T F
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV 446
Query: 474 YNMGDDATIATIKEIMSEVDRDKDGRISYDEFRAMM 509
D T K ++SEVD++ DG + +DEF+ M+
Sbjct: 447 ----SDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/456 (38%), Positives = 261/456 (57%), Gaps = 20/456 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + LG+G +G + LC + TG++ A K ++KR++ KTD++ + REVQ+++ L P
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 109
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI++ +ED + ++V E+ GELFD II++ +SE AA + R ++ + H
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRYGK 248
+VHRDLKPEN L S ++A +++ DFG S FE K +D +G+AYY+APEVL Y +
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 229
Query: 249 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRML 308
+ D+WS GVILYILLSG PPF E I + +G F+ W +S AKDL+R+ML
Sbjct: 230 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 289
Query: 309 TQDPKKRITAAEVLEHPWLKESGK---ASDKPIDTAVIFRMKQFRAMNKLKKLALKVIVE 365
T P RI+A + L+H W++ K + D P I ++QF+ KL + AL +
Sbjct: 290 TYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGS 349
Query: 366 NLPTE-EIQKLKEKFTEMDTDNNGTLSYDELKAGLAKL-------GSML----TESDIKQ 413
L ++ E ++L F +MD + +G L EL G +L SML E ++ Q
Sbjct: 350 KLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQ 409
Query: 414 YMQAADIDGNGTIDYIEFITATMQRHKLERFEHLYKAFQYFDKDNSGYITVDELETAFKE 473
+ A D D NG I+Y EF+T M R L E L +AF+ FD DNSG I+ EL T F
Sbjct: 410 VLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV 469
Query: 474 YNMGDDATIATIKEIMSEVDRDKDGRISYDEFRAMM 509
D T K ++SEVD++ DG + +DEF+ M+
Sbjct: 470 ----SDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/456 (38%), Positives = 261/456 (57%), Gaps = 20/456 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + LG+G +G + LC + TG++ A K ++KR++ KTD++ + REVQ+++ L P
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 110
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI++ +ED + ++V E+ GELFD II++ +SE AA + R ++ + H
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRYGK 248
+VHRDLKPEN L S ++A +++ DFG S FE K +D +G+AYY+APEVL Y +
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 230
Query: 249 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRML 308
+ D+WS GVILYILLSG PPF E I + +G F+ W +S AKDL+R+ML
Sbjct: 231 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 290
Query: 309 TQDPKKRITAAEVLEHPWLKESGK---ASDKPIDTAVIFRMKQFRAMNKLKKLALKVIVE 365
T P RI+A + L+H W++ K + D P I ++QF+ KL + AL +
Sbjct: 291 TYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGS 350
Query: 366 NLPTE-EIQKLKEKFTEMDTDNNGTLSYDELKAGLAKL-------GSML----TESDIKQ 413
L ++ E ++L F +MD + +G L EL G +L SML E ++ Q
Sbjct: 351 KLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQ 410
Query: 414 YMQAADIDGNGTIDYIEFITATMQRHKLERFEHLYKAFQYFDKDNSGYITVDELETAFKE 473
+ A D D NG I+Y EF+T M R L E L +AF+ FD DNSG I+ EL T F
Sbjct: 411 VLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV 470
Query: 474 YNMGDDATIATIKEIMSEVDRDKDGRISYDEFRAMM 509
D T K ++SEVD++ DG + +DEF+ M+
Sbjct: 471 ----SDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 308 bits (790), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/464 (38%), Positives = 265/464 (57%), Gaps = 27/464 (5%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + LG+G +G + C + T +++A K + K +K D I REV++++ L P
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLD-HP 81
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI++ ED +IV EL GELFD II + +SE AA + + + + H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRYGK 248
+VHRDLKPEN L S +++ +K+ DFG S F++ +D +G+AYY+APEVLR Y +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 249 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRML 308
+ D+WSAGVILYILLSG PPF+ + E I + G FD W TIS AKDL+R+ML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 309 TQDPKKRITAAEVLEHPWLK----ESGKASDKPIDTAVIFRMKQFRAMNKLKKLALKVIV 364
T P RITA + LEHPW++ E+ SD P + + ++QF+A KL + AL +
Sbjct: 262 TFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMA 321
Query: 365 ENLPT-EEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKL---------------GSMLTE 408
L T +E ++L E F ++DT+N+G L DEL G + GS + E
Sbjct: 322 SKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTI-E 380
Query: 409 SDIKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLYKAFQYFDKDNSGYITVDELE 468
I M D+DG+G+I+Y EFI + + R L E + +AF+ FDKD SG I+ EL
Sbjct: 381 DQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKEL- 439
Query: 469 TAFKEYNMGDDAT-IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
FK ++ D + + ++ I+ +VD +KDG + ++EF M+++
Sbjct: 440 --FKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQN 481
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 308 bits (789), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 174/474 (36%), Positives = 267/474 (56%), Gaps = 19/474 (4%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT 109
L +P + + Y K+LG G YG + LC + T + A K + ++ VS +
Sbjct: 20 LQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIK-IIRKTSVSTS 78
Query: 110 DRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERA 169
+ EV +++ L PNI++ +ED R ++VME GELFD II + ++E
Sbjct: 79 SNSKLLEEVAVLKLLD-HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVD 137
Query: 170 AASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD 229
AA + + ++ V H +VHRDLKPEN L S +++A++K+ DFG S FE K ++
Sbjct: 138 AAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE 197
Query: 230 IVGSAYYVAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFD 289
+G+AYY+APEVLR++Y ++ D+WS GVIL+ILL+G PPF +T++ I + +G FD
Sbjct: 198 RLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 290 SAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPID----TAVIFR 345
S W +S GAKDL+++ML D ++RI+A + LEHPW+KE + I+ I
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIEN 317
Query: 346 MKQFRAMNKLKKLALKVIVENLPT-EEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGS 404
M++F+ KL + AL + L + EE ++L + F +D + +G L EL G +KL
Sbjct: 318 MRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSG 377
Query: 405 M--------LTESDIKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLYKAFQYFDK 456
ES++ + AAD D NG IDY EF+T M R L + L AFQ FD+
Sbjct: 378 EEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQ 437
Query: 457 DNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISYDEFRAMMK 510
D +G I+VDEL + F D T KE++S +D + DG + ++EF M++
Sbjct: 438 DGNGKISVDELASVFGL----DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 487
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 307 bits (787), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 172/458 (37%), Positives = 258/458 (56%), Gaps = 21/458 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y K+LG G YG + LC + TG + A K + K + + ++ + EV +++ L P
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HP 64
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI++ +ED R ++VME+ GELFD II + +SE AA + + ++ H
Sbjct: 65 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN 124
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRYGK 248
+VHRDLKPEN L S +A++K+ DFG S FE G ++ +G+AYY+APEVLR++Y +
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDE 184
Query: 249 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRML 308
+ D+WS GVILYILL G PPF +T++ I + +G FD W +S AK LV+ ML
Sbjct: 185 KCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLML 244
Query: 309 TQDPKKRITAAEVLEHPWLKE--SGKASD--KPIDTAVIFRMKQFRAMNKLKKLALKVIV 364
T +P KRI+A E L HPW+ + S K +D K T + MK+F++ KL + A+ +
Sbjct: 245 TYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLFMG 304
Query: 365 ENLPT-EEIQKLKEKFTEMDTDNNGTLSYDELKAGLAK-----------LGSMLTESDIK 412
L T EE ++L + F ++D + +G L EL G K L S E+++
Sbjct: 305 SKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVD 364
Query: 413 QYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLYKAFQYFDKDNSGYITVDELETAFK 472
+Q+ D D NG I+Y EF+T M + L E L AFQ FD D SG IT +EL F
Sbjct: 365 HILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 424
Query: 473 EYNMGDDATIATIKEIMSEVDRDKDGRISYDEFRAMMK 510
+ D+ T +++ E D++ DG + ++EF MM+
Sbjct: 425 VTEVDDE----TWHQVLQECDKNNDGEVDFEEFVEMMQ 458
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 305 bits (782), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 169/456 (37%), Positives = 253/456 (55%), Gaps = 20/456 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + LG+G +G + LC + TG++ A K ++KR++ KTD++ + REVQ+++ L P
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 86
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI + +ED + ++V E+ GELFD II++ +SE AA + R ++ + H
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRYGK 248
+VHRDLKPEN L S ++A +++ DFG S FE K +D +G+AYY+APEVL Y +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDE 206
Query: 249 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRML 308
+ D+WS GVILYILLSG PPF E I + +G F+ W +S AKDL+R+ L
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXL 266
Query: 309 TQDPKKRITAAEVLEHPWLKESGK---ASDKPIDTAVIFRMKQFRAMNKLKKLALKVIVE 365
T P RI+A + L+H W++ K + D P I ++QF+ KL + AL
Sbjct: 267 TYVPSXRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYXGS 326
Query: 366 NLPTE-EIQKLKEKFTEMDTDNNGTLSYDELKAGL-----------AKLGSMLTESDIKQ 413
L ++ E ++L F + D + +G L EL G + L + E ++ Q
Sbjct: 327 KLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQ 386
Query: 414 YMQAADIDGNGTIDYIEFITATMQRHKLERFEHLYKAFQYFDKDNSGYITVDELETAFKE 473
+ A D D NG I+Y EF+T R L E L +AF+ FD DNSG I+ EL T F
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGV 446
Query: 474 YNMGDDATIATIKEIMSEVDRDKDGRISYDEFRAMM 509
D T K ++SEVD++ DG + +DEF+ +
Sbjct: 447 ----SDVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 160/479 (33%), Positives = 251/479 (52%), Gaps = 27/479 (5%)
Query: 53 SPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD 112
+P + K + Y ++LG G YG + LC E + + A K + K + D
Sbjct: 22 NPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSD 81
Query: 113 D----------IKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK 162
D I E+ +++ L PNI++ +ED ++ ++V E GELF++II +
Sbjct: 82 DNKNIEKFHEEIYNEISLLKSLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR 140
Query: 163 GHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE 222
+ E AA++ + I+ + H +VHRD+KPEN L + + +K+ DFG S FF
Sbjct: 141 HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
Query: 223 EGKVYRDIVGSAYYVAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL 282
+ RD +G+AYY+APEVL+++Y ++ D+WS GVI+YILL G PPF + ++ I +
Sbjct: 201 KDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE 260
Query: 283 QGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESG---KASDKPID 339
+G FD W IS AK+L++ MLT D KR TA E L W+K+ SD+
Sbjct: 261 KGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTL 320
Query: 340 TAVIFRMKQFRAMNKLKKLALKVIVENLPT-EEIQKLKEKFTEMDTDNNGTLSYDELKAG 398
+ M++F KL + A+ I L T EE ++L + F ++D + +G L EL G
Sbjct: 321 CGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEG 380
Query: 399 L-------AKLGSMLT-ESDIKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLYKA 450
+LG + E ++ ++ D D NG I+Y EFI+ M + L E L +A
Sbjct: 381 YNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRA 440
Query: 451 FQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISYDEFRAMM 509
F FD D SG IT +EL F ++ + T +++ E D++KD I +DEF +MM
Sbjct: 441 FNLFDTDKSGKITKEELANLFGLTSISE----KTWNDVLGEADQNKDNMIDFDEFVSMM 495
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 163/260 (62%), Gaps = 1/260 (0%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + LG+G +G + LC + TG++ A K ++KR++ KTD++ + REVQ+++ L P
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 92
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI++ +ED + ++V E+ GELFD II++ +SE AA + R ++ + H
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRYGK 248
+VHRDLKPEN L S ++A +++ DFG S FE K +D +G+AYY+APEVL Y +
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 212
Query: 249 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRML 308
+ D+WS GVILYILLSG PPF E I + +G F+ W +S AKDL+R+ML
Sbjct: 213 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 272
Query: 309 TQDPKKRITAAEVLEHPWLK 328
T P RI+A + L+H W++
Sbjct: 273 TYVPSMRISARDALDHEWIQ 292
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 178/298 (59%), Gaps = 4/298 (1%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + +ELG+G + ++ C++ TG+++A K + +KL S D ++RE +I + L P
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARICRLLK-HP 63
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NIV + + F ++V +L GELF+ I+A+ +YSE A+ + I+ VN CH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRR-RY 246
+VHRDLKPEN L S + A +K+ DFG + + + + + G+ Y++PEVLR+ Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRR 306
GK +D+W+ GVILYILL G PPFW E + ++ I G DF S W T++ AKDL+ +
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 243
Query: 307 MLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMNKLKKLALKVIV 364
MLT +P KRITA+E L+HPW+ + + + +K+F A KLK L ++
Sbjct: 244 MLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTML 301
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 167/273 (61%), Gaps = 4/273 (1%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D+ +YT+ +GRG +G + + ++ T + A K + K + D D K+E++IM+
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKS 79
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
L PNI+ +ED +++VMELC GELF+R++ K + E AA + +D++ V
Sbjct: 80 LD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 138
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR 243
CH V HRDLKPENFLF ++ ++ +K+ DFG + F+ GK+ R VG+ YYV+P+VL
Sbjct: 139 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 198
Query: 244 RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
YG E D WSAGV++Y+LL G PPF A T+ + I +G F W +S A+ L
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 258
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+RR+LT+ PK+RIT+ + LEH W ++ +S +
Sbjct: 259 IRRLLTKSPKQRITSLQALEHEWFEKQLSSSPR 291
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 178/298 (59%), Gaps = 4/298 (1%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + +ELG+G + ++ C++ TG+++A K + +KL S D ++RE +I + L P
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARICRLLK-HP 63
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NIV + + F ++V +L GELF+ I+A+ +YSE A+ + I+ VN CH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRR-RY 246
+VHRDLKPEN L S + A +K+ DFG + + + + + G+ Y++PEVLR+ Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRR 306
GK +D+W+ GVILYILL G PPFW E + ++ I G DF S W T++ AKDL+ +
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 243
Query: 307 MLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMNKLKKLALKVIV 364
MLT +P KRITA+E L+HPW+ + + + +K+F A KLK L ++
Sbjct: 244 MLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTML 301
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 167/273 (61%), Gaps = 4/273 (1%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D+ +YT+ +GRG +G + + ++ T + A K + K + D D K+E++IM+
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKS 62
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
L PNI+ +ED +++VMELC GELF+R++ K + E AA + +D++ V
Sbjct: 63 LD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR 243
CH V HRDLKPENFLF ++ ++ +K+ DFG + F+ GK+ R VG+ YYV+P+VL
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 181
Query: 244 RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
YG E D WSAGV++Y+LL G PPF A T+ + I +G F W +S A+ L
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 241
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+RR+LT+ PK+RIT+ + LEH W ++ +S +
Sbjct: 242 IRRLLTKSPKQRITSLQALEHEWFEKQLSSSPR 274
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/266 (40%), Positives = 161/266 (60%), Gaps = 1/266 (0%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
++ + Y K+LG G YG + LC + TG + A K + K + + ++ + EV ++
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVV 181
+ L PNI++ +ED R ++VME+ GELFD II + +SE AA + + ++
Sbjct: 76 KQLD-HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGT 134
Query: 182 NVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV 241
H +VHRDLKPEN L S +A++K+ DFG S FE G ++ +G+AYY+APEV
Sbjct: 135 TYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEV 194
Query: 242 LRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
LR++Y ++ D+WS GVILYILL G PPF +T++ I + +G FD W +S AK
Sbjct: 195 LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAK 254
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWL 327
LV+ MLT +P KRI+A E L HPW+
Sbjct: 255 QLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 221 bits (564), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 173/293 (59%), Gaps = 4/293 (1%)
Query: 66 KSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLS 125
+S Y + +ELG+G + ++ C++ G+++A K + +KL S D ++RE +I + L
Sbjct: 21 QSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL-SARDHQKLEREARICRLLK 79
Query: 126 GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCH 185
PNIV + + +++ +L GELF+ I+A+ +YSE A+ + I+ V CH
Sbjct: 80 -HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 138
Query: 186 TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRR 244
GVVHRDLKPEN L S + A +K+ DFG + E E + + G+ Y++PEVLR+
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK 198
Query: 245 -RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
YGK +D+W+ GVILYILL G PPFW E + ++ I G DF S W T++ AKDL
Sbjct: 199 DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 258
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMNKLK 356
+ +MLT +P KRITAAE L+HPW+ + + +K+F A KLK
Sbjct: 259 INKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 311
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 221 bits (563), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 187/325 (57%), Gaps = 8/325 (2%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + +ELG+G + ++ C++ G+++A + +KL S D ++RE +I + L P
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLK-HP 70
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NIV + + +++ +L GELF+ I+A+ +YSE A+ + I+ V CH G
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRR-RY 246
VVHR+LKPEN L S + A +K+ DFG + E E + + G+ Y++PEVLR+ Y
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRR 306
GK +D+W+ GVILYILL G PPFW E + ++ I G DF S W T++ AKDL+ +
Sbjct: 191 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 250
Query: 307 MLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMNKLKKLALKVIVE- 365
MLT +P KRITAAE L+HPW+ + + +K+F A KLK L V++
Sbjct: 251 MLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVMLAT 310
Query: 366 ---NLPTEEIQKLKEKFTEMDTDNN 387
++ +EI K+ E+ E ++ +
Sbjct: 311 RNFSVRKQEIIKVTEQLIEAISNGD 335
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 176/299 (58%), Gaps = 5/299 (1%)
Query: 60 KPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQ 119
K ED+K + + LG G + + L E +TG+ FA K + K+ L K I+ E+
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL--KGKESSIENEIA 72
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
+++ + + NIV + YE +++VM+L + GELFDRI+ KG Y+E+ A+++ R ++
Sbjct: 73 VLRKIKHE-NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD 131
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V H G+VHRDLKPEN L+ S DE + + ++DFG S +G V G+ YVAP
Sbjct: 132 AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAP 191
Query: 240 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS 298
EVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ IL+ +FDS W IS
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISD 251
Query: 299 GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMNKLKK 357
AKD +R ++ +DP KR T + HPW+ A +K I +V ++++ A +K ++
Sbjct: 252 SAKDFIRNLMEKDPNKRYTCEQAARHPWIA-GDTALNKNIHESVSAQIRKNFAKSKWRQ 309
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/261 (42%), Positives = 158/261 (60%), Gaps = 2/261 (0%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + LG+G +G + C + T +++A K + K +K D I REV++++ L P
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLD-HP 81
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI++ ED +IV EL GELFD II + +SE AA + + + + H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRYGK 248
+VHRDLKPEN L S +++ +K+ DFG S F++ +D +G+AYY+APEVLR Y +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 249 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRML 308
+ D+WSAGVILYILLSG PPF+ + E I + G FD W TIS AKDL+R+ML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 309 TQDPKKRITAAEVLEHPWLKE 329
T P RITA + LEHPW+++
Sbjct: 262 TFHPSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/261 (42%), Positives = 158/261 (60%), Gaps = 2/261 (0%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + LG+G +G + C + T +++A K + K +K D I REV++++ L P
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLD-HP 81
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI++ ED +IV EL GELFD II + +SE AA + + + + H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRYGK 248
+VHRDLKPEN L S +++ +K+ DFG S F++ +D +G+AYY+APEVLR Y +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 249 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRML 308
+ D+WSAGVILYILLSG PPF+ + E I + G FD W TIS AKDL+R+ML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 309 TQDPKKRITAAEVLEHPWLKE 329
T P RITA + LEHPW+++
Sbjct: 262 TFHPSLRITATQCLEHPWIQK 282
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 218 bits (554), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 173/298 (58%), Gaps = 3/298 (1%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + +ELG+G + ++ C+ +TG +FA K + +KL S D ++RE +I + L
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-H 87
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV + ++ F ++V +L GELF+ I+A+ YSE A+ + I+ + CH+
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 147
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRR-RY 246
G+VHR+LKPEN L S + A +K+ DFG + + + + G+ Y++PEVL++ Y
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 207
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRR 306
K +DIW+ GVILYILL G PPFW E + ++ I G D+ S W T++ AK L+
Sbjct: 208 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 267
Query: 307 MLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMNKLKKLALKVIV 364
MLT +PKKRITA + L+ PW+ + + + +K+F A KLK L ++
Sbjct: 268 MLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMI 325
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 178/296 (60%), Gaps = 13/296 (4%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELGRG I+Y C + T + +A K + K D+ ++ E+ ++ LS PNI++
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVLKK-----TVDKKIVRTEIGVLLRLS-HPNIIKL 113
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRD 193
K +E + +V+EL GELFDRI+ KG+YSER AA + I+ V H G+VHRD
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRD 173
Query: 194 LKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDI 252
LKPEN L+ + +A +K+ DFG S E + + + G+ Y APE+LR YG E+D+
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDM 233
Query: 253 WSAGVILYILLSGVPPFWAET-EKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
WS G+I YILL G PF+ E ++ +F IL F S W +S AKDLVR+++ D
Sbjct: 234 WSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLD 293
Query: 312 PKKRITAAEVLEHPWLKESGKASD-KPIDTAVIFRMKQFRAMNKLKKLALKVIVEN 366
PKKR+T + L+HPW+ +GKA++ +DTA ++++F A KLK A+K +V +
Sbjct: 294 PKKRLTTFQALQHPWV--TGKAANFVHMDTAQK-KLQEFNARRKLKA-AVKAVVAS 345
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 171/290 (58%), Gaps = 4/290 (1%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + +++G+G + ++ C++ TG ++A K + +KL S D ++RE +I + L
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL-SARDHQKLEREARICRLLK-HS 63
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NIV + + F ++V +L GELF+ I+A+ +YSE A+ + I+ V CH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 123
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRRR-Y 246
VVHRDLKPEN L S + A +K+ DFG + + + + + G+ Y++PEVLR+ Y
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAY 183
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRR 306
GK +DIW+ GVILYILL G PPFW E + ++ I G DF S W T++ AK+L+ +
Sbjct: 184 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQ 243
Query: 307 MLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMNKLK 356
MLT +P KRITA E L+HPW+ + + + +K+F A KLK
Sbjct: 244 MLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 173/299 (57%), Gaps = 5/299 (1%)
Query: 60 KPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQ 119
K ED++ Y LG G + + L + T + A K +AK+ L K ++ E+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGK--EGSMENEIA 68
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ H PNIV YE ++++M+L + GELFDRI+ KG Y+ER A+ + ++
Sbjct: 69 VL-HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V H G+VHRDLKPEN L+ S DE++ + ++DFG S + G V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 240 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS 298
EVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ IL+ +FDS W IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 299 GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMNKLKK 357
AKD +R ++ +DP+KR T + L+HPW+ A DK I +V ++K+ A +K K+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 172/299 (57%), Gaps = 5/299 (1%)
Query: 60 KPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQ 119
K ED++ Y LG G + + L + T + A K +AK L K ++ E+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK--EGSMENEIA 68
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ H PNIV YE ++++M+L + GELFDRI+ KG Y+ER A+ + ++
Sbjct: 69 VL-HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V H G+VHRDLKPEN L+ S DE++ + ++DFG S + G V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 240 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS 298
EVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ IL+ +FDS W IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 299 GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMNKLKK 357
AKD +R ++ +DP+KR T + L+HPW+ A DK I +V ++K+ A +K K+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 172/299 (57%), Gaps = 5/299 (1%)
Query: 60 KPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQ 119
K ED++ Y LG G + + L + T + A K +AK L K ++ E+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK--EGSMENEIA 68
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ H PNIV YE ++++M+L + GELFDRI+ KG Y+ER A+ + ++
Sbjct: 69 VL-HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V H G+VHRDLKPEN L+ S DE++ + ++DFG S + G V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 240 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS 298
EVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ IL+ +FDS W IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 299 GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMNKLKK 357
AKD +R ++ +DP+KR T + L+HPW+ A DK I +V ++K+ A +K K+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 173/298 (58%), Gaps = 4/298 (1%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + +ELG+G + ++ C++ + +++A K + +KL S D ++RE +I + L P
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL-SARDHQKLEREARICRLLK-HP 90
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NIV + + F ++V +L GELF+ I+A+ +YSE A+ I+ VN H
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD 150
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRR-RY 246
+VHRDLKPEN L S + A +K+ DFG + + E + + G+ Y++PEVLR+ Y
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPY 210
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRR 306
GK +DIW+ GVILYILL G PPFW E + ++ I G DF S W T++ AK+L+ +
Sbjct: 211 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQ 270
Query: 307 MLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMNKLKKLALKVIV 364
MLT +P KRITA + L+HPW+ + + + +++F A KLK L ++
Sbjct: 271 MLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTML 328
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 102/261 (39%), Positives = 159/261 (60%), Gaps = 3/261 (1%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + +ELG+G + ++ C+ +TG +FA K + +KL S D ++RE +I + L
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-H 64
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV + ++ F ++V +L GELF+ I+A+ YSE A+ + I+ + CH+
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRR-RY 246
G+VHR+LKPEN L S + A +K+ DFG + + + + G+ Y++PEVL++ Y
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRR 306
K +DIW+ GVILYILL G PPFW E + ++ I G D+ S W T++ AK L+
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 244
Query: 307 MLTQDPKKRITAAEVLEHPWL 327
MLT +PKKRITA + L+ PW+
Sbjct: 245 MLTVNPKKRITADQALKVPWI 265
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/261 (39%), Positives = 159/261 (60%), Gaps = 3/261 (1%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + +ELG+G + ++ C+ +TG +FA K + +KL S D ++RE +I + L
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-H 64
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV + ++ F ++V +L GELF+ I+A+ YSE A+ + I+ + CH+
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRR-RY 246
G+VHR+LKPEN L S + A +K+ DFG + + + + G+ Y++PEVL++ Y
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRR 306
K +DIW+ GVILYILL G PPFW E + ++ I G D+ S W T++ AK L+
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 244
Query: 307 MLTQDPKKRITAAEVLEHPWL 327
MLT +PKKRITA + L+ PW+
Sbjct: 245 MLTVNPKKRITADQALKVPWI 265
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 163/284 (57%), Gaps = 5/284 (1%)
Query: 60 KPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQ 119
K ED++ Y LG G + + L + T + A K +AK L K ++ E+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK--EGSMENEIA 68
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ H PNIV YE ++++M+L + GELFDRI+ KG Y+ER A+ + ++
Sbjct: 69 VL-HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V H G+VHRDLKPEN L+ S DE++ + ++DFG S + G V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 240 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS 298
EVL ++ Y K +D WS GVI YILL G PPF+ E + +F+ IL+ +FDS W IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 299 GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAV 342
AKD +R ++ +DP+KR T + L+HPW+ A DK I +V
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSV 290
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/261 (39%), Positives = 159/261 (60%), Gaps = 3/261 (1%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + +ELG+G + ++ C+ +TG +FA K + +KL S D ++RE +I + L
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-H 63
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV + ++ F ++V +L GELF+ I+A+ YSE A+ + I+ + CH+
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 123
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRR-RY 246
G+VHR+LKPEN L S + A +K+ DFG + + + + G+ Y++PEVL++ Y
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 183
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRR 306
K +DIW+ GVILYILL G PPFW E + ++ I G D+ S W T++ AK L+
Sbjct: 184 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 243
Query: 307 MLTQDPKKRITAAEVLEHPWL 327
MLT +PKKRITA + L+ PW+
Sbjct: 244 MLTVNPKKRITADQALKVPWI 264
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/271 (40%), Positives = 160/271 (59%), Gaps = 6/271 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
EDV+ HY MG+ELG GQ+ I+ C + TG+++A K + KR+L S R++I+REV
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PNI+ +E+ V +++EL + GELFD + K +E A + I+
Sbjct: 68 ILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 126
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V+ H+K + H DLKPEN L N N +K+ DFG + E G +++I G+ +VA
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 186
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF ET++ I N DFD + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 246
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
AKD +RR+L +DPK+R+ A+ LEH W+K
Sbjct: 247 ELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/269 (40%), Positives = 159/269 (59%), Gaps = 6/269 (2%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQIM 121
V+ HY MG+ELG GQ+ I+ C + TG+++A K + KR+L S R++I+REV I+
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVV 181
+ + PNI+ +E+ V +++EL + GELFD + K +E A + I+ V
Sbjct: 63 REIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 182 NVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE 240
+ H+K + H DLKPEN L N N +K+ DFG + E G +++I G+ +VAPE
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
Query: 241 VLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSG 299
++ G E D+WS GVI YILLSG PF ET++ I N DFD + S
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241
Query: 300 AKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
AKD +RR+L +DPK+R+T A+ LEH W+K
Sbjct: 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 171/310 (55%), Gaps = 13/310 (4%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT--DRDDIKREVQ 119
+EDV Y + + +G+G + ++ CI TG+QFA K V K S +D+KRE
Sbjct: 22 FEDV---YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH----YSERAAASVFR 175
I H+ P+IVE Y +++V E +L I+ + YSE A+ R
Sbjct: 79 IC-HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 176 DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSA 234
I+ + CH ++HRD+KPEN L S + +A +K+ DFG + E G V VG+
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTP 197
Query: 235 YYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPW 293
+++APEV++R YGK +D+W GVIL+ILLSG PF+ E+ +F+ I++G + W
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQW 256
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMN 353
IS AKDLVRRML DP +RIT E L HPWLKE + + K + ++++F A
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 316
Query: 354 KLKKLALKVI 363
KLK L +
Sbjct: 317 KLKGAVLAAV 326
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 158/269 (58%), Gaps = 6/269 (2%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQIM 121
V+ HY MG+ELG GQ+ I+ C + TG+++A K + KR+L S R++I+REV I+
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVV 181
+ + PNI+ +E+ V +++EL + GELFD + K +E A + I+ V
Sbjct: 84 REIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 142
Query: 182 NVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE 240
+ H+K + H DLKPEN L N N +K+ DFG + E G +++I G+ +VAPE
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 202
Query: 241 VLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSG 299
++ G E D+WS GVI YILLSG PF ET++ I N DFD + S
Sbjct: 203 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 262
Query: 300 AKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
AKD +RR+L +DPK+R+ A+ LEH W+K
Sbjct: 263 AKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 174/296 (58%), Gaps = 9/296 (3%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD-IKREVQIMQ 122
+++ + + LG G + ++L + TG+ FA K + K S RD ++ E+ +++
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKK----SPAFRDSSLENEIAVLK 61
Query: 123 HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVN 182
+ + NIV + YE ++VM+L + GELFDRI+ +G Y+E+ A+ V + ++ V
Sbjct: 62 KIKHE-NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVK 120
Query: 183 VCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL 242
H G+VHRDLKPEN L+ + +EN+ + +TDFG S E+ + G+ YVAPEVL
Sbjct: 121 YLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS-KMEQNGIMSTACGTPGYVAPEVL 179
Query: 243 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
++ Y K +D WS GVI YILL G PPF+ ETE +F+ I +G +F+S W IS AK
Sbjct: 180 AQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAK 239
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMNKLKK 357
D + +L +DP +R T + L HPW+ + A + I +V ++++ A +K ++
Sbjct: 240 DFICHLLEKDPNERYTCEKALSHPWI-DGNTALHRDIYPSVSLQIQKNFAKSKWRQ 294
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 154/266 (57%), Gaps = 15/266 (5%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACK--SVAKRKLVSKT---DRDDIKREVQIMQHLSGQPN 129
+GRG ++ C+ +TG +FA K V +L + R+ +RE I++ ++G P+
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 130 IVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
I+ +YE F+ +V +L GELFD + K SE+ S+ R ++ V+ H +
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNI 221
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRR---- 245
VHRDLKPEN L D+N ++++DFGFS E G+ R++ G+ Y+APE+L+
Sbjct: 222 VHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDET 278
Query: 246 ---YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKD 302
YGKE+D+W+ GVIL+ LL+G PPFW + + I++G F S W SS KD
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKD 338
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWLK 328
L+ R+L DP+ R+TA + L+HP+ +
Sbjct: 339 LISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 197 bits (502), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 120/345 (34%), Positives = 180/345 (52%), Gaps = 25/345 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT--DRDDIKREVQ 119
+EDV Y + + +G+G + ++ CI TG+QFA K V K S +D+KRE
Sbjct: 24 FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 80
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH----YSERAAASVFR 175
I H+ P+IVE Y +++V E +L I+ + YSE A+ R
Sbjct: 81 IC-HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 139
Query: 176 DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSA 234
I+ + CH ++HRD+KP L S + +A +K+ FG + E G V VG+
Sbjct: 140 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 199
Query: 235 YYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPW 293
+++APEV++R YGK +D+W GVIL+ILLSG PF+ E+ +F+ I++G + W
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQW 258
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMN 353
IS AKDLVRRML DP +RIT E L HPWLKE + + K + ++++F A
Sbjct: 259 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 318
Query: 354 KLKKLALKVIVENL-------PTEEIQKLKEKFTEMDTDNNGTLS 391
KLK L + + P EE+ E D ++G L+
Sbjct: 319 KLKGAVLAAVSSHKFNSFYGDPPEELPDFSE-----DPTSSGLLA 358
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 168/305 (55%), Gaps = 15/305 (4%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
E+V +Y G+ELG GQ+ ++ C E STG Q+A K + KR+ S R+DI+REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PN++ YE+ V +++EL A GELFD + K +E A + I++
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V H+ + H DLKPEN L N +K+ DFG + + G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ + N +F+ + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDT-AVIFRMKQFRAMNKLK 356
+ AKD +RR+L +DPKKR+T + L+HPW+ KP DT + R M K K
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWI--------KPKDTQQALSRKASAVNMEKFK 297
Query: 357 KLALK 361
K A +
Sbjct: 298 KFAAR 302
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 168/310 (54%), Gaps = 13/310 (4%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT--DRDDIKREVQ 119
+EDV Y + + +G+G + ++ CI TG+QFA K V K S +D+KRE
Sbjct: 22 FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH----YSERAAASVFR 175
I H+ P+IVE Y +++V E +L I+ + YSE A+ R
Sbjct: 79 IC-HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 176 DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSA 234
I+ + CH ++HRD+KP L S + +A +K+ FG + E G V VG+
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 197
Query: 235 YYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPW 293
+++APEV++R YGK +D+W GVIL+ILLSG PF+ E+ +F+ I++G + W
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQW 256
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMN 353
IS AKDLVRRML DP +RIT E L HPWLKE + + K + ++++F A
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 316
Query: 354 KLKKLALKVI 363
KLK L +
Sbjct: 317 KLKGAVLAAV 326
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 157/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
E+V +Y G+ELG GQ+ ++ C E STG Q+A K + KR+ S R+DI+REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PN++ YE+ V +++EL A GELFD + K +E A + I++
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V H+ + H DLKPEN L N +K+ DFG + + G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ + N +F+ + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+ AKD +RR+L +DPKKR+T + L+HPW+K
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 157/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
E+V +Y G+ELG GQ+ ++ C E STG Q+A K + KR+ S R+DI+REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PN++ YE+ V +++EL A GELFD + K +E A + I++
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V H+ + H DLKPEN L N +K+ DFG + + G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVA 185
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ + N +F+ + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+ AKD +RR+L +DPKKR+T + L+HPW+K
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 157/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
E+V +Y G+ELG GQ+ ++ C E STG Q+A K + KR+ S R+DI+REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PN++ YE+ V +++EL A GELFD + K +E A + I++
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V H+ + H DLKPEN L N +K+ DFG + + G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ + N +F+ + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+ AKD +RR+L +DPKKR+T + L+HPW+K
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 157/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
E+V +Y G+ELG GQ+ ++ C E STG Q+A K + KR+ S R+DI+REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PN++ YE+ V +++EL A GELFD + K +E A + I++
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V H+ + H DLKPEN L N +K+ DFG + + G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ + N +F+ + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+ AKD +RR+L +DPKKR+T + L+HPW+K
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 157/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
E+V +Y G+ELG GQ+ ++ C E STG Q+A K + KR+ S R+DI+REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PN++ YE+ V +++EL A GELFD + K +E A + I++
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V H+ + H DLKPEN L N +K+ DFG + + G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ + N +F+ + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+ AKD +RR+L +DPKKR+T + L+HPW+K
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 157/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
E+V +Y G+ELG GQ+ ++ C E STG Q+A K + KR+ S R+DI+REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PN++ YE+ V +++EL A GELFD + K +E A + I++
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V H+ + H DLKPEN L N +K+ DFG + + G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ + N +F+ + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+ AKD +RR+L +DPKKR+T + L+HPW+K
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 157/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
E+V +Y G+ELG GQ+ ++ C E STG Q+A K + KR+ S R+DI+REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PN++ YE+ V +++EL A GELFD + K +E A + I++
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V H+ + H DLKPEN L N +K+ DFG + + G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ + N +F+ + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+ AKD +RR+L +DPKKR+T + L+HPW+K
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 157/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
E+V +Y G+ELG GQ+ ++ C E STG Q+A K + KR+ S R+DI+REV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PN++ YE+ V +++EL A GELFD + K +E A + I++
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V H+ + H DLKPEN L N +K+ DFG + + G +++I G+ +VA
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ + N +F+ + S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+ AKD +RR+L +DPKKR+T + L+HPW+K
Sbjct: 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 157/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
E+V +Y G+ELG GQ+ ++ C E STG Q+A K + KR+ S R+DI+REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PN++ YE+ V +++EL A GELFD + K +E A + I++
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V H+ + H DLKPEN L N +K+ DFG + + G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ + N +F+ + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+ AKD +RR+L +DPKKR+T + L+HPW+K
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 157/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
E+V +Y G+ELG GQ+ ++ C E STG Q+A K + KR+ S R+DI+REV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PN++ YE+ V +++EL A GELFD + K +E A + I++
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V H+ + H DLKPEN L N +K+ DFG + + G +++I G+ +VA
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ + N +F+ + S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+ AKD +RR+L +DPKKR+T + L+HPW+K
Sbjct: 245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 157/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
E+V +Y G+ELG G++ ++ C E STG Q+A K + KR+ S R+DI+REV
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PN++ YE+ V +++EL A GELFD + K +E A + I++
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V H+ + H DLKPEN L N +K+ DFG + + G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ + N +F+ + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+ AKD +RR+L +DPKKR+T + L+HPW+K
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 156/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
E+V +Y G+ELG GQ+ ++ C E STG Q+A K + KR+ S R+DI+REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PN++ YE+ V ++ EL A GELFD + K +E A + I++
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V H+ + H DLKPEN L N +K+ DFG + + G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ + N +F+ + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+ AKD +RR+L +DPKKR+T + L+HPW+K
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 148/268 (55%), Gaps = 16/268 (5%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACK--SVAKRKLVSKTDRDDIK----REVQIMQHLSGQP 128
LGRG ++ CI T +++A K V S + +++ +EV I++ +SG P
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI++ K YE F +V +L GELFD + K SE+ + R ++ V+ H
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRR--- 245
+VHRDLKPEN L D++ +K+TDFGFS + G+ R++ G+ Y+APE++
Sbjct: 145 IVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 201
Query: 246 ----YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
YGKE+D+WS GVI+Y LL+G PPFW + + I+ GN F S W S K
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWLKE 329
DLV R L P+KR TA E L HP+ ++
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 156/271 (57%), Gaps = 6/271 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
E+V +Y G+ELG G + ++ C E STG Q+A K + KR+ S R+DI+REV
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PN++ YE+ V +++EL A GELFD + K +E A + I++
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
V H+ + H DLKPEN L N +K+ DFG + + G +++I G+ +VA
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ + N +F+ + S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+ AKD +RR+L +DPKKR+T + L+HPW+K
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 148/268 (55%), Gaps = 16/268 (5%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACK--SVAKRKLVSKTDRDDIK----REVQIMQHLSGQP 128
LGRG ++ CI T +++A K V S + +++ +EV I++ +SG P
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI++ K YE F +V +L GELFD + K SE+ + R ++ V+ H
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 131
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRR--- 245
+VHRDLKPEN L D++ +K+TDFGFS + G+ R++ G+ Y+APE++
Sbjct: 132 IVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 188
Query: 246 ----YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
YGKE+D+WS GVI+Y LL+G PPFW + + I+ GN F S W S K
Sbjct: 189 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 248
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWLKE 329
DLV R L P+KR TA E L HP+ ++
Sbjct: 249 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 147/268 (54%), Gaps = 16/268 (5%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACK--SVAKRKLVSKTDRDDIK----REVQIMQHLSGQP 128
LGRG ++ CI T +++A K V S + +++ +EV I++ +SG P
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI++ K YE F +V +L GELFD + K SE+ + R ++ V+ H
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRR--- 245
+VHRDLKPEN L D++ +K+TDFGFS + G+ R + G+ Y+APE++
Sbjct: 145 IVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMND 201
Query: 246 ----YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
YGKE+D+WS GVI+Y LL+G PPFW + + I+ GN F S W S K
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWLKE 329
DLV R L P+KR TA E L HP+ ++
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 191 bits (485), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD-----DIKREVQ 119
++ Y M K LG G G + L E T ++ A K ++KRK + R+ +++ E++
Sbjct: 14 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 73
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ L+ P I++ K + D +IV+EL GELFD+++ E F ++
Sbjct: 74 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V H G++HRDLKPEN L +S +E+ ++K+TDFG S E + R + G+ Y+AP
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 191
Query: 240 EVL----RRRYGKEIDIWSAGVILYILLSGVPPFWA-ETEKGIFDAILQGNIDFDSAPWP 294
EVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F W
Sbjct: 192 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 251
Query: 295 TISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+S A DLV+++L DPK R T E L HPWL++
Sbjct: 252 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD-----DIKREVQ 119
++ Y M K LG G G + L E T ++ A K ++KRK + R+ +++ E++
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ L+ P I++ K + D +IV+EL GELFD+++ E F ++
Sbjct: 68 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V H G++HRDLKPEN L +S +E+ ++K+TDFG S E + R + G+ Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 240 EVL----RRRYGKEIDIWSAGVILYILLSGVPPFWA-ETEKGIFDAILQGNIDFDSAPWP 294
EVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 295 TISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+S A DLV+++L DPK R T E L HPWL++
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD-----DIKREVQ 119
++ Y M K LG G G + L E T ++ A K ++KRK + R+ +++ E++
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ L+ P I++ K + D +IV+EL GELFD+++ E F ++
Sbjct: 68 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V H G++HRDLKPEN L +S +E+ ++K+TDFG S E + R + G+ Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 240 EVL----RRRYGKEIDIWSAGVILYILLSGVPPFWA-ETEKGIFDAILQGNIDFDSAPWP 294
EVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 295 TISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+S A DLV+++L DPK R T E L HPWL++
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD-----DIKREVQ 119
++ Y M K LG G G + L E T ++ A K ++KRK + R+ +++ E++
Sbjct: 7 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ L+ P I++ K + D +IV+EL GELFD+++ E F ++
Sbjct: 67 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V H G++HRDLKPEN L +S +E+ ++K+TDFG S E + R + G+ Y+AP
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 184
Query: 240 EVL----RRRYGKEIDIWSAGVILYILLSGVPPFWA-ETEKGIFDAILQGNIDFDSAPWP 294
EVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F W
Sbjct: 185 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 244
Query: 295 TISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+S A DLV+++L DPK R T E L HPWL++
Sbjct: 245 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD-----DIKREVQ 119
++ Y M K LG G G + L E T ++ A K ++KRK + R+ +++ E++
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ L+ P I++ K + D +IV+EL GELFD+++ E F ++
Sbjct: 68 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V H G++HRDLKPEN L +S +E+ ++K+TDFG S E + R + G+ Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 240 EVL----RRRYGKEIDIWSAGVILYILLSGVPPFWA-ETEKGIFDAILQGNIDFDSAPWP 294
EVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 295 TISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+S A DLV+++L DPK R T E L HPWL++
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 160/283 (56%), Gaps = 14/283 (4%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
+ V+ Y +G+ELG GQ+ I+ C E STG ++A K + KR+ + R++I+REV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + PNI+ YE+ V +++EL + GELFD + K SE A S + I+
Sbjct: 68 ILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
VN HTK + H DLKPEN L N +K+ DFG + E+G +++I G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ I + DFD + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDT 340
AKD +R++L ++ +KR+T E L HPW+ P+DT
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWI--------TPVDT 281
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD-----DIKREVQ 119
++ Y M K LG G G + L E T ++ A + ++KRK + R+ +++ E++
Sbjct: 147 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 206
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ L+ P I++ K + D +IV+EL GELFD+++ E F ++
Sbjct: 207 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V H G++HRDLKPEN L +S +E+ ++K+TDFG S E + R + G+ Y+AP
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 324
Query: 240 EVL----RRRYGKEIDIWSAGVILYILLSGVPPFWA-ETEKGIFDAILQGNIDFDSAPWP 294
EVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F W
Sbjct: 325 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 384
Query: 295 TISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+S A DLV+++L DPK R T E L HPWL++
Sbjct: 385 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD-----DIKREVQ 119
++ Y M K LG G G + L E T ++ A + ++KRK + R+ +++ E++
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ L+ P I++ K + D +IV+EL GELFD+++ E F ++
Sbjct: 193 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V H G++HRDLKPEN L +S +E+ ++K+TDFG S E + R + G+ Y+AP
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 310
Query: 240 EVL----RRRYGKEIDIWSAGVILYILLSGVPPFWA-ETEKGIFDAILQGNIDFDSAPWP 294
EVL Y + +D WS GVIL+I LSG PPF T+ + D I G +F W
Sbjct: 311 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 370
Query: 295 TISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+S A DLV+++L DPK R T E L HPWL++
Sbjct: 371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 165/317 (52%), Gaps = 32/317 (10%)
Query: 41 EAQFSGPEPLPHSPDTILGKPYEDVKSHYTMGKE-LGRGQYGIIYLCIENSTGRQFACKS 99
E F GPEP ++ V Y + K+ LG G G + C TG++ A K
Sbjct: 13 EVLFQGPEPKKYA-----------VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKL 61
Query: 100 VAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDM----RFVHIVMELCADGEL 155
+ D ++EV SG P+IV YE+M R + I+ME GEL
Sbjct: 62 LY--------DSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGEL 113
Query: 156 FDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVT 213
F RI +G ++ER AA + RDI + H+ + HRD+KPEN L+TS +++A++K+T
Sbjct: 114 FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLT 173
Query: 214 DFGFSFFFEEGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGVPPFWAE 272
DFGF+ + + + + YYVAPEVL +Y K D+WS GVI+YILL G PPF++
Sbjct: 174 DFGFAKETTQNAL-QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN 232
Query: 273 TEKGIFDA----ILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
T + I I G F + W +S AK L+R +L DP +R+T + + HPW+
Sbjct: 233 TGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN 292
Query: 329 ESGKASDKPIDTAVIFR 345
+S P+ TA + +
Sbjct: 293 QSMVVPQTPLHTARVLQ 309
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 155/270 (57%), Gaps = 6/270 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
+ V+ Y +G+ELG GQ+ I+ C E STG ++A K + KR+ + R++I+REV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + N++ YE+ V +++EL + GELFD + K SE A S + I+
Sbjct: 68 ILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
VN HTK + H DLKPEN L N +K+ DFG + E+G +++I G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ I + DFD + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
AKD +R++L ++ +KR+T E L HPW+
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 155/270 (57%), Gaps = 6/270 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
+ V+ Y +G+ELG GQ+ I+ C E STG ++A K + KR+ + R++I+REV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + N++ YE+ V +++EL + GELFD + K SE A S + I+
Sbjct: 68 ILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 180 VVNVCHTKGVVHRDLKPENF-LFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
VN HTK + H DLKPEN L N +K+ DFG + E+G +++I G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ I + DFD + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
AKD +R++L ++ +KR+T E L HPW+
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 155/270 (57%), Gaps = 6/270 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
+ V+ Y +G+ELG GQ+ I+ C E STG ++A K + KR+ + R++I+REV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + N++ YE+ V +++EL + GELFD + K SE A S + I+
Sbjct: 68 ILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 180 VVNVCHTKGVVHRDLKPENF-LFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
VN HTK + H DLKPEN L N +K+ DFG + E+G +++I G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ I + DFD + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
AKD +R++L ++ +KR+T E L HPW+
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 155/270 (57%), Gaps = 6/270 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
+ V+ Y +G+ELG GQ+ I+ C E STG ++A K + KR+ + R++I+REV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + N++ YE+ V +++EL + GELFD + K SE A S + I+
Sbjct: 68 ILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 180 VVNVCHTKGVVHRDLKPEN-FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
VN HTK + H DLKPEN L N +K+ DFG + E+G +++I G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ I + DFD + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
AKD +R++L ++ +KR+T E L HPW+
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 155/270 (57%), Gaps = 6/270 (2%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK---TDRDDIKREVQ 119
+ V+ Y +G+ELG GQ+ I+ C E STG ++A K + KR+ + R++I+REV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I++ + N++ YE+ V +++EL + GELFD + K SE A S + I+
Sbjct: 68 ILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 180 VVNVCHTKGVVHRDLKPENF-LFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
VN HTK + H DLKPEN L N +K+ DFG + E+G +++I G+ +VA
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 239 PEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ G E D+WS GVI YILLSG PF +T++ I + DFD + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
AKD +R++L ++ +KR+T E L HPW+
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 157/293 (53%), Gaps = 21/293 (7%)
Query: 65 VKSHYTMGKE-LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
V Y + K+ LG G G + C TG++ A K + D ++EV
Sbjct: 7 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY--------DSPKARQEVDHHWQ 58
Query: 124 LSGQPNIVEFKGAYEDM----RFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDI 177
SG P+IV YE+M R + I+ME GELF RI +G ++ER AA + RDI
Sbjct: 59 ASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 118
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYV 237
+ H+ + HRD+KPEN L+TS +++A++K+TDFGF+ + + + + YYV
Sbjct: 119 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-QTPCYTPYYV 177
Query: 238 APEVL-RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDA----ILQGNIDFDSAP 292
APEVL +Y K D+WS GVI+YILL G PPF++ T + I I G F +
Sbjct: 178 APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 237
Query: 293 WPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFR 345
W +S AK L+R +L DP +R+T + + HPW+ +S P+ TA + +
Sbjct: 238 WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQ 290
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 147/265 (55%), Gaps = 13/265 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + +++G G Y + CI +T +FA K ++ K+ RD + E++I+ P
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVK------IIDKSKRDPTE-EIEILLRYGQHP 76
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ K Y+D ++V++V EL GEL D+I+ + +SER A++V I V H +G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 189 VVHRDLKPENFLFTSNDENA-IMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRRR- 245
VVHRDLKP N L+ N +++ DFGF+ E + +A +VAPEVL R+
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQG 196
Query: 246 YGKEIDIWSAGVILYILLSGVPPFWA---ETEKGIFDAILQGNIDFDSAPWPTISSGAKD 302
Y DIWS GV+LY +L+G PF +T + I I G W ++S AKD
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWL 327
LV +ML DP +R+TAA VL HPW+
Sbjct: 257 LVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 147/270 (54%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + + +G G Y C+ +T ++A K + K K D E++I+ P
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHP 81
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ K Y+D + V++V EL GEL D+I+ + +SER A+ V I V H++G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 189 VVHRDLKPENFLFTSNDENA-IMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRRR- 245
VVHRDLKP N L+ N +++ DFGF+ E + +A +VAPEVL+R+
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 246 YGKEIDIWSAGVILYILLSGVPPFW---AETEKGIFDAILQGNIDFDSAPWPTISSGAKD 302
Y + DIWS G++LY +L+G PF ++T + I I G W T+S AKD
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
LV +ML DP +R+TA +VL+HPW+ + K
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWVTQKDK 291
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 147/270 (54%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + + +G G Y C+ +T ++A K + K K D E++I+ P
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHP 81
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ K Y+D + V++V EL GEL D+I+ + +SER A+ V I V H++G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 189 VVHRDLKPENFLFTSNDENA-IMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRRR- 245
VVHRDLKP N L+ N +++ DFGF+ E + +A +VAPEVL+R+
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 246 YGKEIDIWSAGVILYILLSGVPPFW---AETEKGIFDAILQGNIDFDSAPWPTISSGAKD 302
Y + DIWS G++LY +L+G PF ++T + I I G W T+S AKD
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
LV +ML DP +R+TA +VL+HPW+ + K
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWVTQKDK 291
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 154/289 (53%), Gaps = 18/289 (6%)
Query: 68 HYTMG---KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
HY + K LG G + I C+ + + FA K ++KR + ++E+ ++
Sbjct: 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM------EANTQKEITALKLC 62
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVC 184
G PNIV+ + D +VMEL GELF+RI K H+SE A+ + R ++ V+
Sbjct: 63 EGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHM 122
Query: 185 HTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVLR 243
H GVVHRDLKPEN LFT ++N +K+ DFGF+ + + + + +Y APE+L
Sbjct: 123 HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLN 182
Query: 244 RR-YGKEIDIWSAGVILYILLSGVPPFWAE-------TEKGIFDAILQGNIDFDSAPWPT 295
+ Y + D+WS GVILY +LSG PF + + I I +G+ F+ W
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN 242
Query: 296 ISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIF 344
+S AKDL++ +LT DP KR+ + + + WL++ + S P+ T I
Sbjct: 243 VSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDIL 291
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 145/265 (54%), Gaps = 13/265 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + +++G G Y + CI +T +FA K ++ K+ RD + E++I+ P
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVK------IIDKSKRDPTE-EIEILLRYGQHP 76
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ K Y+D ++V++V EL GEL D+I+ + +SER A++V I V H +G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 189 VVHRDLKPENFLFTSNDENA-IMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRRR- 245
VVHRDLKP N L+ N +++ DFGF+ E + +A +VAPEVL R+
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQG 196
Query: 246 YGKEIDIWSAGVILYILLSGVPPFWA---ETEKGIFDAILQGNIDFDSAPWPTISSGAKD 302
Y DIWS GV+LY L+G PF +T + I I G W ++S AKD
Sbjct: 197 YDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWL 327
LV + L DP +R+TAA VL HPW+
Sbjct: 257 LVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 146/282 (51%), Gaps = 19/282 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG G G + T +FA K + D +REV++ S P+IV
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQCPHIVRIV 75
Query: 135 GAYEDM----RFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKG 188
YE++ + + IVME GELF RI +G ++ER A+ + + I + H+
Sbjct: 76 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 135
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL-RRRYG 247
+ HRD+KPEN L+TS NAI+K+TDFGF+ + + YYVAPEVL +Y
Sbjct: 136 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYD 195
Query: 248 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 196 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 255
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFR 345
+R +L +P +R+T E + HPW+ +S K P+ T+ + +
Sbjct: 256 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 297
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 145/282 (51%), Gaps = 19/282 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG G G + T +FA K + D +REV++ S P+IV
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQCPHIVRIV 121
Query: 135 GAYEDM----RFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKG 188
YE++ + + IVME GELF RI +G ++ER A+ + + I + H+
Sbjct: 122 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 181
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL-RRRYG 247
+ HRD+KPEN L+TS NAI+K+TDFGF+ + YYVAPEVL +Y
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 241
Query: 248 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 242 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 301
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFR 345
+R +L +P +R+T E + HPW+ +S K P+ T+ + +
Sbjct: 302 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 343
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 145/282 (51%), Gaps = 19/282 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG G G + T +FA K + D +REV++ S P+IV
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQCPHIVRIV 127
Query: 135 GAYEDM----RFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKG 188
YE++ + + IVME GELF RI +G ++ER A+ + + I + H+
Sbjct: 128 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 187
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL-RRRYG 247
+ HRD+KPEN L+TS NAI+K+TDFGF+ + YYVAPEVL +Y
Sbjct: 188 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 247
Query: 248 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 248 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 307
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFR 345
+R +L +P +R+T E + HPW+ +S K P+ T+ + +
Sbjct: 308 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 349
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 145/282 (51%), Gaps = 19/282 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG G G + T +FA K + D +REV++ S P+IV
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQCPHIVRIV 77
Query: 135 GAYEDM----RFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKG 188
YE++ + + IVME GELF RI +G ++ER A+ + + I + H+
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 137
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL-RRRYG 247
+ HRD+KPEN L+TS NAI+K+TDFGF+ + YYVAPEVL +Y
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 197
Query: 248 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 198 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 257
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFR 345
+R +L +P +R+T E + HPW+ +S K P+ T+ + +
Sbjct: 258 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 299
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 145/282 (51%), Gaps = 19/282 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG G G + T +FA K + D +REV++ S P+IV
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQCPHIVRIV 83
Query: 135 GAYEDM----RFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKG 188
YE++ + + IVME GELF RI +G ++ER A+ + + I + H+
Sbjct: 84 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 143
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL-RRRYG 247
+ HRD+KPEN L+TS NAI+K+TDFGF+ + YYVAPEVL +Y
Sbjct: 144 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 203
Query: 248 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 204 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 263
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFR 345
+R +L +P +R+T E + HPW+ +S K P+ T+ + +
Sbjct: 264 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 305
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 145/282 (51%), Gaps = 19/282 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG G G + T +FA K + D +REV++ S P+IV
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQCPHIVRIV 75
Query: 135 GAYEDM----RFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKG 188
YE++ + + IVME GELF RI +G ++ER A+ + + I + H+
Sbjct: 76 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 135
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL-RRRYG 247
+ HRD+KPEN L+TS NAI+K+TDFGF+ + YYVAPEVL +Y
Sbjct: 136 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 195
Query: 248 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 196 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 255
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFR 345
+R +L +P +R+T E + HPW+ +S K P+ T+ + +
Sbjct: 256 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 297
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 145/282 (51%), Gaps = 19/282 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG G G + T +FA K + D +REV++ S P+IV
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQCPHIVRIV 77
Query: 135 GAYEDM----RFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKG 188
YE++ + + IVME GELF RI +G ++ER A+ + + I + H+
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 137
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL-RRRYG 247
+ HRD+KPEN L+TS NAI+K+TDFGF+ + YYVAPEVL +Y
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 197
Query: 248 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 198 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 257
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFR 345
+R +L +P +R+T E + HPW+ +S K P+ T+ + +
Sbjct: 258 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 299
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 145/282 (51%), Gaps = 19/282 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG G G + T +FA K + D +REV++ S P+IV
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQCPHIVRIV 76
Query: 135 GAYEDM----RFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKG 188
YE++ + + IVME GELF RI +G ++ER A+ + + I + H+
Sbjct: 77 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 136
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL-RRRYG 247
+ HRD+KPEN L+TS NAI+K+TDFGF+ + YYVAPEVL +Y
Sbjct: 137 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 196
Query: 248 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 197 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 256
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFR 345
+R +L +P +R+T E + HPW+ +S K P+ T+ + +
Sbjct: 257 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 298
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 145/282 (51%), Gaps = 19/282 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG G G + T +FA K + D +REV++ S P+IV
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQCPHIVRIV 82
Query: 135 GAYEDM----RFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKG 188
YE++ + + IVME GELF RI +G ++ER A+ + + I + H+
Sbjct: 83 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 142
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL-RRRYG 247
+ HRD+KPEN L+TS NAI+K+TDFGF+ + YYVAPEVL +Y
Sbjct: 143 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 202
Query: 248 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 203 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 262
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFR 345
+R +L +P +R+T E + HPW+ +S K P+ T+ + +
Sbjct: 263 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 304
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 145/282 (51%), Gaps = 19/282 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG G G + T +FA K + D +REV++ S P+IV
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQCPHIVRIV 81
Query: 135 GAYEDM----RFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKG 188
YE++ + + IVME GELF RI +G ++ER A+ + + I + H+
Sbjct: 82 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 141
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL-RRRYG 247
+ HRD+KPEN L+TS NAI+K+TDFGF+ + YYVAPEVL +Y
Sbjct: 142 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 201
Query: 248 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 202 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 261
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFR 345
+R +L +P +R+T E + HPW+ +S K P+ T+ + +
Sbjct: 262 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 303
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 145/282 (51%), Gaps = 19/282 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG G G + T +FA K + D +REV++ S P+IV
Sbjct: 40 LGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRASQCPHIVRIV 91
Query: 135 GAYEDM----RFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKG 188
YE++ + + IVME GELF RI +G ++ER A+ + + I + H+
Sbjct: 92 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 151
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL-RRRYG 247
+ HRD+KPEN L+TS NAI+K+TDFGF+ + YYVAPEVL +Y
Sbjct: 152 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 211
Query: 248 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
K D+WS GVI+YILL G PPF++ G+ I G +F + W +S K L
Sbjct: 212 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 271
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFR 345
+R +L +P +R+T E + HPW+ +S K P+ T+ + +
Sbjct: 272 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 313
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 117/167 (70%), Gaps = 4/167 (2%)
Query: 347 KQFRAMNKLKKLALKVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSML 406
KQF A NK KK AL+VI E+L EEI LKE F +D D +G ++++ELKAGL ++G+ L
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 407 TESDIKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLYKAFQYFDKDNSGYITVDE 466
ES+I QAAD+D +GTIDY EFI AT+ +K+ER +HL+ AF YFDKD SGYIT DE
Sbjct: 61 KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Query: 467 LETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISYDEFRAMMKSGT 513
L+ A +E+ + D I+E+ +VD+D DGRI Y+EF A + G+
Sbjct: 121 LQQACEEFGVED----VRIEELXRDVDQDNDGRIDYNEFVAXXQKGS 163
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 165/314 (52%), Gaps = 39/314 (12%)
Query: 53 SPDTILGKPYEDVKSHYTMGKEL-GRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
S D++ GK +ED+ Y + EL G G Y + + G+++A K + K+ + R
Sbjct: 2 STDSLPGK-FEDM---YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQ---AGHSR 54
Query: 112 DDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+ REV+ + G NI+E +ED ++V E G + I + H++ER A+
Sbjct: 55 SRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS 114
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI- 230
V RD+ ++ HTKG+ HRDLKPEN L S ++ + +K+ DF + I
Sbjct: 115 RVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPIT 174
Query: 231 -------VGSAYYVAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPF-------- 269
GSA Y+APEV+ Y K D+WS GV+LYI+LSG PPF
Sbjct: 175 TPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADC 234
Query: 270 -WAETE------KGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVL 322
W E +F++I +G +F W ISS AKDL+ ++L +D K+R++AA+VL
Sbjct: 235 GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVL 294
Query: 323 EHPWLKESGKASDK 336
+HPW++ G+A +K
Sbjct: 295 QHPWVQ--GQAPEK 306
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 157/266 (59%), Gaps = 8/266 (3%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ ++LG G +G ++L E S+G + K++ K + S+ + I+ E+++++ L P
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLD-HP 80
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRII---AKGH-YSERAAASVFRDIMHVVNVC 184
NI++ +ED ++IVME C GEL +RI+ A+G SE A + + +M+ +
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 185 HTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRR 244
H++ VVH+DLKPEN LF ++ +K+ DFG + F+ + + G+A Y+APEV +R
Sbjct: 141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR 200
Query: 245 RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
+ DIWSAGV++Y LL+G PF + + + ++ P ++ A DL+
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLL 259
Query: 305 RRMLTQDPKKRITAAEVLEHPWLKES 330
++MLT+DP++R +AA+VL H W K++
Sbjct: 260 KQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 139/282 (49%), Gaps = 19/282 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG G G + T +FA K + D +REV++ S P+IV
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKXLQ--------DCPKARREVELHWRASQCPHIVRIV 121
Query: 135 GAYEDM----RFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKG 188
YE++ + + IV E GELF RI +G ++ER A+ + + I + H+
Sbjct: 122 DVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSIN 181
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL-RRRYG 247
+ HRD+KPEN L+TS NAI+K+TDFGF+ + YYVAPEVL +Y
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 241
Query: 248 KEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
K D WS GVI YILL G PPF++ G I G +F + W +S K L
Sbjct: 242 KSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXL 301
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFR 345
+R +L +P +R T E HPW+ +S K P+ T+ + +
Sbjct: 302 IRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLHTSRVLK 343
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 160/307 (52%), Gaps = 29/307 (9%)
Query: 46 GPEPLPHSPDTILGKPYEDVKSH---------------YTMGKELGRGQYGIIYLCIENS 90
GP+PLP +P+ P E++ S + +G+ LG+G++G +YL E
Sbjct: 1 GPQPLPSAPEN---NPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQ 57
Query: 91 TGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELC 150
+ A K + K +L ++REV+I HL PNI+ G + D V++++E
Sbjct: 58 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYA 116
Query: 151 ADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIM 210
G ++ + + E+ A+ ++ + ++ CH+K V+HRD+KPEN L S E +
Sbjct: 117 PLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---L 173
Query: 211 KVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPF 269
K+ DFG+S + D+ G+ Y+ PE++ R + +++D+WS GV+ Y L G PPF
Sbjct: 174 KIADFGWSVHAPSSR-RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
Query: 270 WAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL-K 328
A T + + I + F ++ GA+DL+ R+L +P +R EVLEHPW+
Sbjct: 233 EANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288
Query: 329 ESGKASD 335
S K S+
Sbjct: 289 NSSKPSN 295
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 152/271 (56%), Gaps = 15/271 (5%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HP 72
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVLR-RRY 246
V+HRD+KPEN L SN E +K+ DFG+S + RD + G+ Y+ PE++ R +
Sbjct: 133 VIHRDIKPENLLLGSNGE---LKIADFGWSVHAPSSR--RDTLCGTLDYLPPEMIEGRMH 187
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRR 306
+++D+WS GV+ Y L G+PPF A T + + I + F ++ GA+DL+ R
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDF----VTEGARDLISR 243
Query: 307 MLTQDPKKRITAAEVLEHPWLKESGKASDKP 337
+L + +R+T AEVLEHPW+K + S KP
Sbjct: 244 LLKHNASQRLTLAEVLEHPWIKAN---SSKP 271
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 150/270 (55%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HP 72
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L SN E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 133 VIHRDIKPENLLLGSNGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 188
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G+PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDF----VTEGARDLISRL 244
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L + +R+T AEVLEHPW+K + S KP
Sbjct: 245 LKHNASQRLTLAEVLEHPWIKAN---SSKP 271
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 159/307 (51%), Gaps = 29/307 (9%)
Query: 46 GPEPLPHSPDTILGKPYEDVKSH---------------YTMGKELGRGQYGIIYLCIENS 90
GP+PLP +P+ P E++ S + +G+ LG+G++G +YL E
Sbjct: 1 GPQPLPSAPEN---NPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQ 57
Query: 91 TGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELC 150
+ A K + K +L ++REV+I HL PNI+ G + D V++++E
Sbjct: 58 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYA 116
Query: 151 ADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIM 210
G ++ + + E+ A+ ++ + ++ CH+K V+HRD+KPEN L S E +
Sbjct: 117 PLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---L 173
Query: 211 KVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPF 269
K+ DFG+S + + G+ Y+ PE++ R + +++D+WS GV+ Y L G PPF
Sbjct: 174 KIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
Query: 270 WAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLK- 328
A T + + I + F ++ GA+DL+ R+L +P +R EVLEHPW+
Sbjct: 233 EANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288
Query: 329 ESGKASD 335
S K S+
Sbjct: 289 NSSKPSN 295
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 146/266 (54%), Gaps = 7/266 (2%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V +Y + +ELG G +G+++ C+E +TGR F K + D+ +K E+ IM L
Sbjct: 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI---NTPYPLDKYTVKNEISIMNQL 105
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH-YSERAAASVFRDIMHVVNV 183
P ++ A+ED + +++E + GELFDRI A+ + SE + R +
Sbjct: 106 H-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKH 164
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL- 242
H +VH D+KPEN + + +++ K+ DFG + ++ + +A + APE++
Sbjct: 165 MHEHSIVHLDIKPENIMCETKKASSV-KIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD 223
Query: 243 RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKD 302
R G D+W+ GV+ Y+LLSG+ PF E + + + + +FD + ++S AKD
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWLK 328
++ +L ++P+KR+T + LEHPWLK
Sbjct: 284 FIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 142/268 (52%), Gaps = 7/268 (2%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
++ V HY + +ELG G +G+++ E +TG FA K V ++D++ +++E+Q M
Sbjct: 46 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM---TPHESDKETVRKEIQTM 102
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK-GHYSERAAASVFRDIMHV 180
L P +V A+ED + ++ E + GELF+++ + SE A R +
Sbjct: 103 SVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 161
Query: 181 VNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE 240
+ H VH DLKPEN +FT+ N +K+ DFG + + + + G+A + APE
Sbjct: 162 LCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE 220
Query: 241 VLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSG 299
V + G D+WS GV+ YILLSG+ PF E + + + + D + + IS
Sbjct: 221 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISED 280
Query: 300 AKDLVRRMLTQDPKKRITAAEVLEHPWL 327
KD +R++L DP R+T + LEHPWL
Sbjct: 281 GKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 150/262 (57%), Gaps = 11/262 (4%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + K +G+G + + L TGR+ A K + K +L + T + REV+IM+ L+
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-H 70
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV+ E + ++++ME + GE+FD ++A G E+ A S FR I+ V CH K
Sbjct: 71 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 130
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRY 246
+VHRDLK EN L D + +K+ DFGFS F G GS Y APE+ + ++Y
Sbjct: 131 RIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKY 187
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
G E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L++
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 243
Query: 306 RMLTQDPKKRITAAEVLEHPWL 327
R L +P KR T ++++ W+
Sbjct: 244 RFLVLNPIKRGTLEQIMKDRWI 265
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 142/268 (52%), Gaps = 7/268 (2%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
++ V HY + +ELG G +G+++ E +TG FA K V ++D++ +++E+Q M
Sbjct: 152 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM---TPHESDKETVRKEIQTM 208
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK-GHYSERAAASVFRDIMHV 180
L P +V A+ED + ++ E + GELF+++ + SE A R +
Sbjct: 209 SVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 267
Query: 181 VNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE 240
+ H VH DLKPEN +FT+ N +K+ DFG + + + + G+A + APE
Sbjct: 268 LCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE 326
Query: 241 VLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSG 299
V + G D+WS GV+ YILLSG+ PF E + + + + D + + IS
Sbjct: 327 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISED 386
Query: 300 AKDLVRRMLTQDPKKRITAAEVLEHPWL 327
KD +R++L DP R+T + LEHPWL
Sbjct: 387 GKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 161/298 (54%), Gaps = 12/298 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + ++LGRG++GI++ C+E S+ + + K V V TD+ +K+E+ I+ +++
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK----VKGTDQVLVKKEISIL-NIARHR 61
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKG-HYSERAAASVFRDIMHVVNVCHTK 187
NI+ ++E M + ++ E + ++F+RI +ER S + + H+
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRY- 246
+ H D++PEN ++ + + I K+ +FG + + G +R + + Y APEV +
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTI-KIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVV 180
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRR 306
D+WS G ++Y+LLSG+ PF AET + I + I+ FD + IS A D V R
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240
Query: 307 MLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMNKLKKLALKVIV 364
+L ++ K R+TA+E L+HPWLK+ + + T VI +K R + L K L ++V
Sbjct: 241 LLVKERKSRMTASEALQHPWLKQ----KIERVSTKVIRTLKHRRYYHTLIKKDLNMVV 294
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 144/305 (47%), Gaps = 38/305 (12%)
Query: 51 PHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD 110
PH + K + + + LG G G + T +FA K + D
Sbjct: 2 PHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------D 53
Query: 111 RDDIKREVQIMQHLSGQPNIVEFKGAYEDM----RFVHIVMELCADGELFDRIIAKGH-- 164
+REV++ S P+IV YE++ + + IVME GELF RI +G
Sbjct: 54 CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 113
Query: 165 YSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG 224
++ER A+ + + I + H+ + HRD+KPEN L+TS NAI+K+TDFGF
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF------- 166
Query: 225 KVYRDIVGSAYYVAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAE----TEKGIFDA 280
A E +Y K D+WS GVI+YILL G PPF++ G+
Sbjct: 167 -------------AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 213
Query: 281 ILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDT 340
I G +F + W +S K L+R +L +P +R+T E + HPW+ +S K P+ T
Sbjct: 214 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHT 273
Query: 341 AVIFR 345
+ + +
Sbjct: 274 SRVLK 278
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 137/264 (51%), Gaps = 10/264 (3%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
HY +G LG G +G + + TG + A K + ++K+ S I+RE+Q ++ L
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK-LFRH 75
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
P+I++ + +VME + GELFD I G E+ + +F+ I+ V+ CH
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRY- 246
VVHRDLKPEN L D + K+ DFG S +G+ R GS Y APEV+ R
Sbjct: 136 MVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLY 192
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
G E+DIWS+GVILY LL G PF + +F I G P++ S L++
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVIS----LLK 248
Query: 306 RMLTQDPKKRITAAEVLEHPWLKE 329
ML DP KR T ++ EH W K+
Sbjct: 249 HMLQVDPMKRATIKDIREHEWFKQ 272
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 146/270 (54%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E GE++ + + E+ A+ ++ + ++ CH+K
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 189
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 245
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 246 LKHNPSQRPMLREVLEHPWITAN---SSKP 272
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 112/167 (67%), Gaps = 4/167 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
E L EEI LKE F +DTDN+GT+++DELK GL ++GS L ES+IK M AADID +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 424 GTIDYIEFITATMQRHKLERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
GTIDY EFI AT+ +KLER E+L AF YFDKD SGYIT+DE++ A K++ + D
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDD----I 116
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKSGTHLRAVSSRSLAHVVTIR 530
I +++ E+D+D DG+I Y EF AMM+ + R++ + +R
Sbjct: 117 HIDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLR 163
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 146/270 (54%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E GE++ + + E+ A+ ++ + ++ CH+K
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLXGTLDYLPPEMIEGRMHD 189
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 245
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 246 LKHNPSQRPMLREVLEHPWITAN---SSKP 272
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 150/262 (57%), Gaps = 11/262 (4%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + K +G+G + + L TGR+ A K + K +L + T + REV+IM+ L+
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-H 73
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV+ E + ++++ME + GE+FD ++A G E+ A S FR I+ V CH K
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRY 246
+VHRDLK EN L D + +K+ DFGFS F G G+ Y APE+ + ++Y
Sbjct: 134 RIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKY 190
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
G E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L++
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 246
Query: 306 RMLTQDPKKRITAAEVLEHPWL 327
R L +P KR T ++++ W+
Sbjct: 247 RFLVLNPIKRGTLEQIMKDRWI 268
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 146/270 (54%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + D+ G+ Y+ PE++ R +
Sbjct: 130 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHD 185
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 241
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 242 LKHNPSQRPMLREVLEHPWITAN---SSKP 268
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 146/270 (54%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + D+ G+ Y+ PE++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHD 184
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 240
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 241 LKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 132/265 (49%), Gaps = 10/265 (3%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSG 126
HY +G LG G +G + + TG + A K + ++K+ S IKRE+Q ++ L
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFR 69
Query: 127 QPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHT 186
P+I++ +VME + GELFD I G E A +F+ I+ V+ CH
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 187 KGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRY 246
VVHRDLKPEN L D + K+ DFG S +G+ RD GS Y APEV+ R
Sbjct: 130 HMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRL 186
Query: 247 --GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
G E+DIWS GVILY LL G PF E +F I G ++ L+
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLL 242
Query: 305 RRMLTQDPKKRITAAEVLEHPWLKE 329
ML DP KR T ++ EH W K+
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 146/270 (54%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + D+ G+ Y+ PE++ R +
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHD 189
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 245
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 246 LKHNPSQRPMLREVLEHPWITAN---SSKP 272
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 146/270 (54%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + D+ G+ Y+ PE++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHD 184
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 240
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 241 LKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 150/262 (57%), Gaps = 11/262 (4%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + K +G+G + + L TG++ A K + K +L S + + REV+IM+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRIMKVLN-H 72
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV+ E + +++VME + GE+FD ++A G E+ A + FR I+ V CH K
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRY 246
+VHRDLK EN L D + +K+ DFGFS F G GS Y APE+ + ++Y
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
G E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L++
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 245
Query: 306 RMLTQDPKKRITAAEVLEHPWL 327
+ L +P KR T ++++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 150/262 (57%), Gaps = 11/262 (4%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + K +G+G + + L TG++ A K + K +L S + + REV+IM+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRIMKVLN-H 72
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV+ E + +++VME + GE+FD ++A G E+ A + FR I+ V CH K
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRY 246
+VHRDLK EN L D + +K+ DFGFS F G GS Y APE+ + ++Y
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
G E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L++
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 245
Query: 306 RMLTQDPKKRITAAEVLEHPWL 327
+ L +P KR T ++++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 148/271 (54%), Gaps = 10/271 (3%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E A K + K +L + ++RE++I HL P
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 75
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ + D + +++++E GEL+ + G + E+ +A+ ++ ++ CH +
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L E +K+ DFG+S + R + G+ Y+ PE++ + +
Sbjct: 136 VIHRDIKPENLLMGYKGE---LKIADFGWSVHAPSLR-RRXMCGTLDYLPPEMIEGKTHD 191
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+W AGV+ Y L G+PPF + + I+ ++ F P +S G+KDL+ ++
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKL 247
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKPI 338
L P +R+ V+EHPW+K + + P+
Sbjct: 248 LRYHPPQRLPLKGVMEHPWVKANSRRVLPPV 278
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 148/271 (54%), Gaps = 10/271 (3%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E A K + K +L + ++RE++I HL P
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 74
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ + D + +++++E GEL+ + G + E+ +A+ ++ ++ CH +
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L E +K+ DFG+S + R + G+ Y+ PE++ + +
Sbjct: 135 VIHRDIKPENLLMGYKGE---LKIADFGWSVHAPSLR-RRXMCGTLDYLPPEMIEGKTHD 190
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+W AGV+ Y L G+PPF + + I+ ++ F P +S G+KDL+ ++
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKL 246
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKPI 338
L P +R+ V+EHPW+K + + P+
Sbjct: 247 LRYHPPQRLPLKGVMEHPWVKANSRRVLPPV 277
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 146/270 (54%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + D+ G+ Y+ PE++ R +
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RDDLCGTLDYLPPEMIEGRMHD 187
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 243
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 244 LKHNPSQRPMLREVLEHPWITAN---SSKP 270
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 151/262 (57%), Gaps = 11/262 (4%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + K +G+G + + L TG++ A + + K +L S + + REV+IM+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNS-SSLQKLFREVRIMKVLN-H 72
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV+ E + +++VME + GE+FD ++A G E+ A + FR I+ V CH K
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRY 246
+VHRDLK EN L D + +K+ DFGFS F G + GS Y APE+ + ++Y
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKY 189
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
G E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L++
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 245
Query: 306 RMLTQDPKKRITAAEVLEHPWL 327
+ L +P KR T ++++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 147/271 (54%), Gaps = 15/271 (5%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVLR-RRY 246
V+HRD+KPEN L S E +K+ DFG+S + RD + G+ Y+ PE++ R +
Sbjct: 130 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR--RDTLCGTLDYLPPEMIEGRMH 184
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRR 306
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISR 240
Query: 307 MLTQDPKKRITAAEVLEHPWLKESGKASDKP 337
+L +P +R EVLEHPW+ + S KP
Sbjct: 241 LLKHNPSQRPMLREVLEHPWITAN---SSKP 268
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 147/274 (53%), Gaps = 14/274 (5%)
Query: 60 KPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQ 119
K Y+++ +Y + + +G G + + L TG A K + K L S R IK E++
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR--IKTEIE 60
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
+++L Q +I + E + +V+E C GELFD II++ SE VFR I+
Sbjct: 61 ALKNLRHQ-HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVS 119
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVY--RDIVGSAYYV 237
V H++G HRDLKPEN LF DE +K+ DFG + K Y + GS Y
Sbjct: 120 AVAYVHSQGYAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 238 APEVLRRR--YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPT 295
APE+++ + G E D+WS G++LY+L+ G PF + ++ I++G +D W
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGK--YDVPKW-- 232
Query: 296 ISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+S + L+++ML DPKKRI+ +L HPW+ +
Sbjct: 233 LSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 166/323 (51%), Gaps = 39/323 (12%)
Query: 53 SPDTILGKPYEDVKSHYTMGKE-LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
S D+ G+ +EDV Y + ++ LG G + + CI T +++A K + K+ R
Sbjct: 2 STDSFSGR-FEDV---YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIR 54
Query: 112 DDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+ REV+++ G N++E +E+ ++V E G + I + H++E A+
Sbjct: 55 SRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS 114
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI- 230
V +D+ ++ H KG+ HRDLKPEN L ++ + +K+ DFG + I
Sbjct: 115 VVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIS 174
Query: 231 -------VGSAYYVAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPF-------- 269
GSA Y+APEV+ Y K D+WS GVILYILLSG PPF
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234
Query: 270 -WAETEKG------IFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVL 322
W E +F++I +G +F W IS AKDL+ ++L +D K+R++AA+VL
Sbjct: 235 GWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVL 294
Query: 323 EHPWLKESGKASDKPIDTAVIFR 345
+HPW++ G A + + T ++ +
Sbjct: 295 QHPWVQ--GCAPENTLPTPMVLQ 315
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 146/270 (54%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + ++ G+ Y+ PE++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTELCGTLDYLPPEMIEGRMHD 184
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 240
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 241 LKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 150/262 (57%), Gaps = 11/262 (4%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + K +G+G + + L TG++ A + + K +L S + + REV+IM+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNS-SSLQKLFREVRIMKVLN-H 72
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV+ E + +++VME + GE+FD ++A G E+ A + FR I+ V CH K
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRY 246
+VHRDLK EN L D + +K+ DFGFS F G GS Y APE+ + ++Y
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
G E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L++
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 245
Query: 306 RMLTQDPKKRITAAEVLEHPWL 327
+ L +P KR T ++++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 145/269 (53%), Gaps = 11/269 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 85
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 86 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 145
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 146 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 201
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 257
Query: 308 LTQDPKKRITAAEVLEHPWLK-ESGKASD 335
L +P +R EVLEHPW+ S K S+
Sbjct: 258 LKHNPSQRPMLREVLEHPWITANSSKPSN 286
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 150/262 (57%), Gaps = 11/262 (4%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + K +G+G + + L TG++ A K + K +L S + + REV+IM+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRIMKVLN-H 72
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV+ E + +++VME + GE+FD ++A G E+ A + FR I+ V CH K
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRY 246
+VHRDLK EN L D + +K+ DFGFS F G G+ Y APE+ + ++Y
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKY 189
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
G E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L++
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 245
Query: 306 RMLTQDPKKRITAAEVLEHPWL 327
+ L +P KR T ++++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 154/316 (48%), Gaps = 52/316 (16%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL--VSKTDRDDIKREVQIM 121
+++ Y + +G+G YG++ + IEN T A K + K K+ ++ D + IK EV++M
Sbjct: 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLM 82
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI--------------IAKGHYS- 166
+ L PNI YED +++ +VMELC G L D++ + K
Sbjct: 83 KKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 167 -------------------------ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLF 201
E+ +++ R I ++ H +G+ HRD+KPENFLF
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF 201
Query: 202 TSNDENAIMKVTDFGFS---FFFEEGKVY--RDIVGSAYYVAPEVLR---RRYGKEIDIW 253
++N I K+ DFG S + G+ Y G+ Y+VAPEVL YG + D W
Sbjct: 202 STNKSFEI-KLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW 260
Query: 254 SAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPK 313
SAGV+L++LL G PF + +L + F++ + +S A+DL+ +L ++
Sbjct: 261 SAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVD 320
Query: 314 KRITAAEVLEHPWLKE 329
+R A L+HPW+ +
Sbjct: 321 ERFDAMRALQHPWISQ 336
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 145/270 (53%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 189
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 245
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 246 LKHNPSQRPMLREVLEHPWITAN---SSKP 272
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 145/270 (53%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 70
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 131 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHD 186
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 242
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 243 LKHNPSQRPMLREVLEHPWITAN---SSKP 269
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 145/270 (53%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 187
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 243
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 244 LKHNPSQRPMLREVLEHPWITAN---SSKP 270
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 145/270 (53%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 184
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 240
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 241 LKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 150/262 (57%), Gaps = 11/262 (4%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + K +G+G + + L TG++ A K + K +L S + + REV+IM+ L+
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRIMKVLN-H 65
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV+ E + +++VME + GE+FD ++A G E+ A + FR I+ V CH K
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRY 246
+VHRDLK EN L D + +K+ DFGFS F G GS Y APE+ + ++Y
Sbjct: 126 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 182
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
G E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L++
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLK 238
Query: 306 RMLTQDPKKRITAAEVLEHPWL 327
+ L +P KR T ++++ W+
Sbjct: 239 KFLILNPSKRGTLEQIMKDRWM 260
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 131/265 (49%), Gaps = 10/265 (3%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSG 126
HY +G LG G +G + + TG + A K + ++K+ S IKRE+Q ++ L
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFR 69
Query: 127 QPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHT 186
P+I++ +VME + GELFD I G E A +F+ I+ V+ CH
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 187 KGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRY 246
VVHRDLKPEN L D + K+ DFG S +G+ R GS Y APEV+ R
Sbjct: 130 HMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRL 186
Query: 247 --GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
G E+DIWS GVILY LL G PF E +F I G ++ L+
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLL 242
Query: 305 RRMLTQDPKKRITAAEVLEHPWLKE 329
ML DP KR T ++ EH W K+
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 150/283 (53%), Gaps = 13/283 (4%)
Query: 59 GKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREV 118
GK + + +G+ LG+G++G +YL E + A K + K +L ++REV
Sbjct: 1 GKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 119 QIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+I HL PNI+ G + D V++++E G ++ + + E+ A+ ++
Sbjct: 61 EIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ CH+K V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSCHAPSSR-RTTLSGTLDYLP 175
Query: 239 PEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
PE++ R + +++D+WS GV+ Y L G PPF A T + + I + F ++
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVT 231
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDT 340
GA+DL+ R+L +P +R EVLEHPW+ + S KP ++
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKPSNS 271
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 146/270 (54%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E ++ A K + K +L ++REV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK 128
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHD 184
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPD----FVTEGARDLISRL 240
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 241 LKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 144/270 (53%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE + R +
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEXIEGRXHD 189
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 245
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 246 LKHNPSQRPXLREVLEHPWITAN---SSKP 272
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 145/270 (53%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 72
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 132
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 133 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 188
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 189 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 244
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 245 LKHNPSQRPMLREVLEHPWITAN---SSKP 271
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 145/270 (53%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 67
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 68 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 127
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 128 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 183
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 239
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 240 LKHNPSQRPMLREVLEHPWITAN---SSKP 266
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 145/270 (53%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHD 184
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 240
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 241 LKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 145/270 (53%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTXLCGTLDYLPPEMIEGRMHD 184
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 240
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 241 LKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 145/270 (53%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHD 187
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 243
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 244 LKHNPSQRPMLREVLEHPWITAN---SSKP 270
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 141/260 (54%), Gaps = 10/260 (3%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHD 187
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 243
Query: 308 LTQDPKKRITAAEVLEHPWL 327
L +P +R EVLEHPW+
Sbjct: 244 LKHNPSQRPMLREVLEHPWI 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 145/270 (53%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHD 184
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 240
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 241 LKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 141/260 (54%), Gaps = 10/260 (3%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 187
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 243
Query: 308 LTQDPKKRITAAEVLEHPWL 327
L +P +R EVLEHPW+
Sbjct: 244 LKHNPSQRPMLREVLEHPWI 263
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 145/270 (53%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ +FG+S + + G+ Y+ PE++ R +
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIANFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 187
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 243
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 244 LKHNPSQRPMLREVLEHPWITAN---SSKP 270
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 145/270 (53%), Gaps = 13/270 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K +L ++REV+I HL P
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 70
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ +FG+S + + G+ Y+ PE++ R +
Sbjct: 131 VIHRDIKPENLLLGSAGE---LKIANFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 186
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 242
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R EVLEHPW+ + S KP
Sbjct: 243 LKHNPSQRPMLREVLEHPWITAN---SSKP 269
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 165/323 (51%), Gaps = 39/323 (12%)
Query: 53 SPDTILGKPYEDVKSHYTMGKE-LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
S D+ G+ +EDV Y + ++ LG G + + CI T +++A K + K+ R
Sbjct: 2 STDSFSGR-FEDV---YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIR 54
Query: 112 DDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+ REV+++ G N++E +E+ ++V E G + I + H++E A+
Sbjct: 55 SRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS 114
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI- 230
V +D+ ++ H KG+ HRDLKPEN L ++ + +K+ DF + I
Sbjct: 115 VVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS 174
Query: 231 -------VGSAYYVAPEVLR------RRYGKEIDIWSAGVILYILLSGVPPF-------- 269
GSA Y+APEV+ Y K D+WS GVILYILLSG PPF
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234
Query: 270 -WAETEKG------IFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVL 322
W E +F++I +G +F W IS AKDL+ ++L +D K+R++AA+VL
Sbjct: 235 GWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVL 294
Query: 323 EHPWLKESGKASDKPIDTAVIFR 345
+HPW++ G A + + T ++ +
Sbjct: 295 QHPWVQ--GCAPENTLPTPMVLQ 315
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 140/260 (53%), Gaps = 10/260 (3%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E A K + K +L ++REV+I HL P
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 65
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ G + D V++++E G ++ + + E+ A+ ++ + ++ CH+K
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 125
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L S E +K+ DFG+S + + G+ Y+ PE++ R +
Sbjct: 126 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 181
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+WS GV+ Y L G PPF A T + + I + F ++ GA+DL+ R+
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRL 237
Query: 308 LTQDPKKRITAAEVLEHPWL 327
L +P +R EVLEHPW+
Sbjct: 238 LKHNPSQRPMLREVLEHPWI 257
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 147/271 (54%), Gaps = 10/271 (3%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG+G++G +YL E A K + K +L + ++RE++I HL P
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 74
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ + D + +++++E GEL+ + G + E+ +A+ ++ ++ CH +
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L E +K+ DFG+S + R + G+ Y+ PE++ + +
Sbjct: 135 VIHRDIKPENLLMGYKGE---LKIADFGWSVHAPSLR-RRXMCGTLDYLPPEMIEGKTHD 190
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+W AGV+ Y L G+PPF + + I+ ++ F P +S G+KDL+ ++
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKL 246
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKPI 338
L P +R+ V+EHPW+K + + P+
Sbjct: 247 LRYHPPQRLPLKGVMEHPWVKANSRRVLPPV 277
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 143/271 (52%), Gaps = 5/271 (1%)
Query: 63 EDVKSHYTM-GKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
E+ + Y + KELGRG++ ++ CI STG+++A K + KR+ + R +I E+ ++
Sbjct: 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVL 82
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDIMH 179
+ P ++ YE+ + +++E A GE+F + + SE + + I+
Sbjct: 83 ELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILE 142
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V H +VH DLKP+N L +S +K+ DFG S R+I+G+ Y+AP
Sbjct: 143 GVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAP 202
Query: 240 EVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS 298
E+L D+W+ G+I Y+LL+ PF E + + I Q N+D+ + ++S
Sbjct: 203 EILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQ 262
Query: 299 GAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
A D ++ +L ++P+KR TA L H WL++
Sbjct: 263 LATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 150/287 (52%), Gaps = 12/287 (4%)
Query: 47 PEPLPHSPDTILGKPYEDVKSHYTMGKE--LGRGQYGIIYLCIENSTGRQFACKSVAKRK 104
P P H I+ V S YT+ K LG G++G ++ C E +TG + A K + R
Sbjct: 70 PAPFDHR---IVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG 126
Query: 105 LVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH 164
+ D++++K E+ +M L N+++ A+E + +VME GELFDRII + +
Sbjct: 127 M---KDKEEVKNEISVMNQLD-HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESY 182
Query: 165 -YSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEE 223
+E + I + H ++H DLKPEN L + D I K+ DFG + ++
Sbjct: 183 NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQI-KIIDFGLARRYKP 241
Query: 224 GKVYRDIVGSAYYVAPEVLRRRYGK-EIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL 282
+ + G+ ++APEV+ + D+WS GVI Y+LLSG+ PF + + + IL
Sbjct: 242 REKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNIL 301
Query: 283 QGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
D + + IS AK+ + ++L ++ RI+A+E L+HPWL +
Sbjct: 302 ACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 138/263 (52%), Gaps = 11/263 (4%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + K LG G +G + L +TG++ A K + K+ L + I+RE+ ++ L
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-H 73
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
P+I++ + + +V+E A ELFD I+ + SE+ A F+ I+ V CH
Sbjct: 74 PHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 132
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRY- 246
+VHRDLKPEN L DE+ +K+ DFG S +G + GS Y APEV+ +
Sbjct: 133 KIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 189
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
G E+D+WS GVILY++L PF E+ +F I G +S GA L++
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIK 245
Query: 306 RMLTQDPKKRITAAEVLEHPWLK 328
RML +P RI+ E+++ W K
Sbjct: 246 RMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 138/263 (52%), Gaps = 11/263 (4%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + K LG G +G + L +TG++ A K + K+ L + I+RE+ ++ L
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-H 72
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
P+I++ + + +V+E A ELFD I+ + SE+ A F+ I+ V CH
Sbjct: 73 PHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRY- 246
+VHRDLKPEN L DE+ +K+ DFG S +G + GS Y APEV+ +
Sbjct: 132 KIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 188
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
G E+D+WS GVILY++L PF E+ +F I G +S GA L++
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIK 244
Query: 306 RMLTQDPKKRITAAEVLEHPWLK 328
RML +P RI+ E+++ W K
Sbjct: 245 RMLIVNPLNRISIHEIMQDDWFK 267
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 138/263 (52%), Gaps = 11/263 (4%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + K LG G +G + L +TG++ A K + K+ L + I+RE+ ++ L
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-H 67
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
P+I++ + + +V+E A ELFD I+ + SE+ A F+ I+ V CH
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 126
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRY- 246
+VHRDLKPEN L DE+ +K+ DFG S +G + GS Y APEV+ +
Sbjct: 127 KIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 183
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
G E+D+WS GVILY++L PF E+ +F I G +S GA L++
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIK 239
Query: 306 RMLTQDPKKRITAAEVLEHPWLK 328
RML +P RI+ E+++ W K
Sbjct: 240 RMLIVNPLNRISIHEIMQDDWFK 262
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 138/263 (52%), Gaps = 11/263 (4%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + K LG G +G + L +TG++ A K + K+ L + I+RE+ ++ L
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-H 63
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
P+I++ + + +V+E A ELFD I+ + SE+ A F+ I+ V CH
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRY- 246
+VHRDLKPEN L DE+ +K+ DFG S +G + GS Y APEV+ +
Sbjct: 123 KIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 179
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
G E+D+WS GVILY++L PF E+ +F I G +S GA L++
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIK 235
Query: 306 RMLTQDPKKRITAAEVLEHPWLK 328
RML +P RI+ E+++ W K
Sbjct: 236 RMLIVNPLNRISIHEIMQDDWFK 258
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 151/263 (57%), Gaps = 11/263 (4%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSG 126
+Y + K +G+G + + L TGR+ A K + K +L + T + REV+IM+ L+
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL-NPTSLQKLFREVRIMKILN- 72
Query: 127 QPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHT 186
PNIV+ E + +++VME + GE+FD ++A G E+ A + FR I+ V CH
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 187 KGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RR 245
K +VHRDLK EN L D + +K+ DFGFS F G GS Y APE+ + ++
Sbjct: 133 KYIVHRDLKAENLLL---DGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 246 Y-GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
Y G E+D+WS GVILY L+SG PF + K + + +L+G P+ +S+ ++L+
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLL 245
Query: 305 RRMLTQDPKKRITAAEVLEHPWL 327
+++L +P KR + ++++ W+
Sbjct: 246 KKLLVLNPIKRGSLEQIMKDRWM 268
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 165/321 (51%), Gaps = 23/321 (7%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD-DIKREVQIMQHLSGQ 127
Y + + LG G +G + L T ++ A K ++ R+L+ K+D ++RE+ ++ L
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFIS-RQLLKKSDMHMRVEREISYLKLLR-H 68
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
P+I++ + +V+E A GELFD I+ K +E F+ I+ + CH
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH 127
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRY- 246
+VHRDLKPEN L D+N +K+ DFG S +G + GS Y APEV+ +
Sbjct: 128 KIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLY 184
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIF---DAILQGNIDFDSAPWPTISSGAKD 302
G E+D+WS G++LY++L G PF E +F ++ + DF +S GA+
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQS 237
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRAMNKLKK---LA 359
L+RRM+ DP +RIT E+ PW + +P++ V R ++KL + +
Sbjct: 238 LIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPME-EVQGSYADSRIVSKLGEAMGFS 296
Query: 360 LKVIVENLPTEEIQKLKEKFT 380
IVE L ++E ++KE +
Sbjct: 297 EDYIVEALRSDENNEVKEAYN 317
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 145/261 (55%), Gaps = 11/261 (4%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+Y + K +G+G + + L TG++ A K + K +L S + + REV+I + L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRIXKVLN-H 72
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV+ E + +++V E + GE+FD ++A G E+ A + FR I+ V CH K
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQK 132
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRY 246
+VHRDLK EN L D + +K+ DFGFS F G G+ Y APE+ + ++Y
Sbjct: 133 FIVHRDLKAENLLL---DADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKY 189
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
G E+D+WS GVILY L+SG PF + K + + +L+G P+ S+ ++L++
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YXSTDCENLLK 245
Query: 306 RMLTQDPKKRITAAEVLEHPW 326
+ L +P KR T ++ + W
Sbjct: 246 KFLILNPSKRGTLEQIXKDRW 266
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 147/270 (54%), Gaps = 10/270 (3%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ +G+ LG+G++G +YL E + A K + K ++ + ++RE++I HL P
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH-HP 83
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
NI+ + D R +++++E GEL+ + + E+ A++ ++ + CH K
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK 143
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
V+HRD+KPEN L E I DFG+S + + + G+ Y+ PE++ R +
Sbjct: 144 VIHRDIKPENLLLGLKGELKI---ADFGWSVHAPSLR-RKTMCGTLDYLPPEMIEGRMHN 199
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
+++D+W GV+ Y LL G PPF + + + I++ ++ F + ++ +GA+DL+ ++
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA----SVPTGAQDLISKL 255
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKP 337
L +P +R+ A+V HPW++ + + P
Sbjct: 256 LRHNPSERLPLAQVSAHPWVRANSRRVLPP 285
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 139/288 (48%), Gaps = 22/288 (7%)
Query: 45 SGPEPLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRK 104
SGP LP D+ Y + K++G G +G+ L + + A K + + +
Sbjct: 7 SGPMDLPIMHDS----------DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE 56
Query: 105 LVSKTDRDDIKREVQIMQHLS-GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKG 163
++ ++KRE I+ H S PNIV FK + IVME + GELF+RI G
Sbjct: 57 KIAA----NVKRE--IINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG 110
Query: 164 HYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEE 223
+SE A F+ ++ V+ CH V HRDLK EN L + +K+ DFG+S
Sbjct: 111 RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPR-LKICDFGYSKSSVL 169
Query: 224 GKVYRDIVGSAYYVAPEVLRRRY--GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAI 281
+ VG+ Y+APEVL ++ GK D+WS GV LY++L G PF E F
Sbjct: 170 HSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKT 229
Query: 282 LQG--NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+ N+ + + IS + L+ R+ DP KRI+ E+ H W
Sbjct: 230 IHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 132/264 (50%), Gaps = 12/264 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLS-GQ 127
Y + K++G G +G+ L + + A K + + + + +++KRE I+ H S
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKRE--IINHRSLRH 73
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV FK + IVME + GELF+RI G +SE A F+ ++ V+ CH
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 133
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRY- 246
V HRDLK EN L + +K+ DFG+S + VG+ Y+APEVL ++
Sbjct: 134 QVCHRDLKLENTLLDGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 192
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG--NIDFDSAPWPTISSGAKDL 303
GK D+WS GV LY++L G PF E F + N+ + + IS + L
Sbjct: 193 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 252
Query: 304 VRRMLTQDPKKRITAAEVLEHPWL 327
+ R+ DP KRI+ E+ H W
Sbjct: 253 ISRIFVADPAKRISIPEIRNHEWF 276
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 139/288 (48%), Gaps = 22/288 (7%)
Query: 45 SGPEPLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRK 104
SGP LP D+ Y + K++G G +G+ L + + A K + + +
Sbjct: 7 SGPMDLPIMHDS----------DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE 56
Query: 105 LVSKTDRDDIKREVQIMQHLS-GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKG 163
+ +++KRE I+ H S PNIV FK + IVME + GELF+RI G
Sbjct: 57 KID----ENVKRE--IINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG 110
Query: 164 HYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEE 223
+SE A F+ ++ V+ CH V HRDLK EN L + +K+ FG+S
Sbjct: 111 RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPR-LKICAFGYSKSSVL 169
Query: 224 GKVYRDIVGSAYYVAPEVLRRRY--GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAI 281
+D VG+ Y+APEVL ++ GK D+WS GV LY++L G PF E F
Sbjct: 170 HSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKT 229
Query: 282 LQG--NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+ N+ + + IS + L+ R+ DP KRI+ E+ H W
Sbjct: 230 IHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 138/288 (47%), Gaps = 22/288 (7%)
Query: 45 SGPEPLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRK 104
SGP LP D+ Y + K++G G +G+ L + + A K + + +
Sbjct: 7 SGPMDLPIMHDS----------DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE 56
Query: 105 LVSKTDRDDIKREVQIMQHLS-GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKG 163
+ +++KRE I+ H S PNIV FK + IVME + GELF+RI G
Sbjct: 57 KID----ENVKRE--IINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG 110
Query: 164 HYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEE 223
+SE A F+ ++ V+ CH V HRDLK EN L + +K+ FG+S
Sbjct: 111 RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPR-LKICAFGYSKSSVL 169
Query: 224 GKVYRDIVGSAYYVAPEVLRRRY--GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAI 281
+ VG+ Y+APEVL ++ GK D+WS GV LY++L G PF E F
Sbjct: 170 HSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKT 229
Query: 282 LQG--NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+ N+ + + IS + L+ R+ DP KRI+ E+ H W
Sbjct: 230 IHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 147/285 (51%), Gaps = 17/285 (5%)
Query: 56 TILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK 115
T +G+ ED K +G LG+G + +Y TG + A K + K+ + ++
Sbjct: 4 TCIGEKIEDFK----VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQ 59
Query: 116 REVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASV 173
EV+I L P+I+E +ED +V++V+E+C +GE+ +R + +SE A
Sbjct: 60 NEVKIHCQLK-HPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHF 117
Query: 174 FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVG 232
I+ + H+ G++HRDL N L T N +K+ DFG + + + + + G
Sbjct: 118 MHQIITGMLYLHSHGILHRDLTLSNLLLTRNMN---IKIADFGLATQLKMPHEKHYTLCG 174
Query: 233 SAYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSA 291
+ Y++PE+ R +G E D+WS G + Y LL G PPF +T K + ++ + + S
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSF 234
Query: 292 PWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+S AKDL+ ++L ++P R++ + VL+HP++ + K
Sbjct: 235 ----LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSK 275
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 139/267 (52%), Gaps = 16/267 (5%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G +G ++L GR +A K V K+++V + + + + ++M + P
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMK-VLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
I+ G ++D + + ++M+ GELF + + A ++ + H+K
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD 126
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRR-YG 247
+++RDLKPEN L D+N +K+TDFGF+ + + V + G+ Y+APEV+ + Y
Sbjct: 127 IIYRDLKPENILL---DKNGHIKITDFGFAKYVPD--VTYXLCGTPDYIAPEVVSTKPYN 181
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
K ID WS G+++Y +L+G PF+ ++ IL + F P + KDL+ R+
Sbjct: 182 KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSRL 237
Query: 308 LTQDPKKRI-----TAAEVLEHPWLKE 329
+T+D +R+ +V HPW KE
Sbjct: 238 ITRDLSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 134/257 (52%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 95
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 156 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +A +P A+DLV
Sbjct: 213 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPK----ARDLV 268
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 269 EKLLVLDATKRLGCEEM 285
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 147/293 (50%), Gaps = 15/293 (5%)
Query: 34 IQEPAAPEAQFSGPE--PLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENST 91
I +P+A + P+ PL PD ++ Y G+ LG+G + Y + T
Sbjct: 10 IAKPSAKPSAHVDPKSAPLKEIPDVLVD---PRTMKRYMRGRFLGKGGFAKCYEITDMDT 66
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCA 151
FA K V K L+ ++ + E+ I + L P++V F G +ED FV++V+E+C
Sbjct: 67 KEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICR 125
Query: 152 DGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMK 211
L + + +E A R + V H V+HRDLK N LF ++D + +K
Sbjct: 126 RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLNDDMD--VK 182
Query: 212 VTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPF 269
+ DFG + E +G+ +D+ G+ Y+APEVL ++ + E+DIWS G ILY LL G PPF
Sbjct: 183 IGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 270 WAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVL 322
K + I + S P I+ A L+RRML DP R + AE+L
Sbjct: 243 ETSCLKETYIRIKKNEY---SVPR-HINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 130/264 (49%), Gaps = 12/264 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLS-GQ 127
Y + K++G G +G+ L + A K + + + + +++KRE I+ H S
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKID----ENVKRE--IINHRSLRH 74
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV FK + IVME + GELF+RI G +SE A F+ ++ V+ H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAM 134
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRY- 246
V HRDLK EN L + +K+ DFG+S + VG+ Y+APEVL ++
Sbjct: 135 QVAHRDLKLENTLLDGSPAPR-LKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEY 193
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG--NIDFDSAPWPTISSGAKDL 303
GK D+WS GV LY++L G PF E F + N+ + + IS + L
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 304 VRRMLTQDPKKRITAAEVLEHPWL 327
+ R+ DP KRI+ E+ H W
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 145/269 (53%), Gaps = 29/269 (10%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM---QHLSGQPNI 130
++G G GI+ L E +GRQ A K + RK + R+ + EV IM QH N+
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHF----NV 104
Query: 131 VEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVV 190
VE +Y + ++ME G L D I+++ +E A+V ++ + H +GV+
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVI 163
Query: 191 HRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVLRRR-YGK 248
HRD+K ++ L T + +K++DFGF + R +VG+ Y++APEV+ R Y
Sbjct: 164 HRDIKSDSILLTLDGR---VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYAT 220
Query: 249 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPT------ISSGAKD 302
E+DIWS G+++ ++ G PP+++ D+ +Q +P P +S +D
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFS-------DSPVQAMKRLRDSPPPKLKNSHKVSPVLRD 273
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWLKESG 331
+ RML +DP++R TA E+L+HP+L ++G
Sbjct: 274 FLERMLVRDPQERATAQELLDHPFLLQTG 302
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 89
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 150 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 262
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 263 EKLLVLDATKRLGCEEM 279
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 93
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 154 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 266
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 267 EKLLVLDATKRLGCEEM 283
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 265
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 97
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 158 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 215 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 270
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 271 EKLLVLDATKRLGCEEM 287
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 151 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 263
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 151 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 263
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 265
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 265
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 69
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 129
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 130 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 187 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 242
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 243 EKLLVLDATKRLGCEEM 259
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 74
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 135 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 192 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 247
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 248 EKLLVLDATKRLGCEEM 264
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 151 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 263
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 70
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 130
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 131 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 188 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 243
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 244 EKLLVLDATKRLGCEEM 260
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 210 SAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----ARDLV 265
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 93
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 154 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 266
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 267 EKLLVLDATKRLGCEEM 283
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 89
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 150 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 262
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 263 EKLLVLDATKRLGCEEM 279
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 67
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 127
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 128 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 240
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 241 EKLLVLDATKRLGCEEM 257
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 68
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 129 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 241
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 242 EKLLVLDATKRLGCEEM 258
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----ARDLV 265
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 139/276 (50%), Gaps = 13/276 (4%)
Query: 49 PLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSK 108
PL PD ++ Y G+ LG+G + Y + T FA K V K L+
Sbjct: 11 PLKEIPDVLVD---PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKP 67
Query: 109 TDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
++ + E+ I + L P++V F G +ED FV++V+E+C L + + +E
Sbjct: 68 HQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP 126
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVY 227
A R + V H V+HRDLK N LF ++D + +K+ DFG + E +G+
Sbjct: 127 EARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERK 183
Query: 228 RDIVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNI 286
+D+ G+ Y+APEVL ++ + E+DIWS G ILY LL G PPF K + I +
Sbjct: 184 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY 243
Query: 287 DFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVL 322
S P I+ A L+RRML DP R + AE+L
Sbjct: 244 ---SVPR-HINPVASALIRRMLHADPTLRPSVAELL 275
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 154/289 (53%), Gaps = 17/289 (5%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D +S+ ++G G GI+ + S+G+ A K + RK + R+ + EV IM+
Sbjct: 148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRD 204
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
+ N+VE +Y + +VME G L D I+ +E A+V ++ ++V
Sbjct: 205 YQHE-NVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSV 262
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVL 242
H +GV+HRD+K ++ L T + +K++DFGF +E + +VG+ Y++APE++
Sbjct: 263 LHAQGVIHRDIKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 319
Query: 243 RR-RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
R YG E+DIWS G+++ ++ G PP++ E I + N+ +S K
Sbjct: 320 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLK 378
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFR 350
+ R+L +DP +R TAAE+L+HP+L ++G + +++ M+Q R
Sbjct: 379 GFLDRLLVRDPAQRATAAELLKHPFLAKAGPPA------SIVPLMRQNR 421
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 146/293 (49%), Gaps = 15/293 (5%)
Query: 34 IQEPAAPEAQFSGPE--PLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENST 91
I +P+A + P+ PL PD ++ Y G+ LG+G + Y + T
Sbjct: 10 IAKPSAKPSAHVDPKSAPLKEIPDVLVD---PRTMKRYMRGRFLGKGGFAKCYEITDMDT 66
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCA 151
FA K V K L+ ++ + E+ I + L P++V F G +ED FV++V+E+C
Sbjct: 67 KEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICR 125
Query: 152 DGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMK 211
L + + +E A R + V H V+HRDLK N LF ++D + +K
Sbjct: 126 RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLNDDMD--VK 182
Query: 212 VTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPF 269
+ DFG + E +G+ + + G+ Y+APEVL ++ + E+DIWS G ILY LL G PPF
Sbjct: 183 IGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 270 WAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVL 322
K + I + S P I+ A L+RRML DP R + AE+L
Sbjct: 243 ETSCLKETYIRIKKNEY---SVPR-HINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 131/257 (50%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +GEL I G + E +I+ + H KG
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 151 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 263
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 146/293 (49%), Gaps = 15/293 (5%)
Query: 34 IQEPAAPEAQFSGPE--PLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENST 91
I +P+A + P+ PL PD ++ Y G+ LG+G + Y + T
Sbjct: 10 IAKPSAKPSAHVDPKSAPLKEIPDVLVD---PRTMKRYMRGRFLGKGGFAKCYEITDMDT 66
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCA 151
FA K V K L+ ++ + E+ I + L P++V F G +ED FV++V+E+C
Sbjct: 67 KEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICR 125
Query: 152 DGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMK 211
L + + +E A R + V H V+HRDLK N LF ++D + +K
Sbjct: 126 RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLNDDMD--VK 182
Query: 212 VTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPF 269
+ DFG + E +G+ + + G+ Y+APEVL ++ + E+DIWS G ILY LL G PPF
Sbjct: 183 IGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 270 WAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVL 322
K + I + S P I+ A L+RRML DP R + AE+L
Sbjct: 243 ETSCLKETYIRIKKNEY---SVPR-HINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 92
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 152
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN L DE ++VTDFGF+ +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 153 DLKPENLLI---DEQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 207
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 208 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 263
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 264 LTKRFGNLKNGVNDIKNHKWF 284
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG FA K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG FA K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG FA K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 154/289 (53%), Gaps = 17/289 (5%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D +S+ ++G G GI+ + S+G+ A K + RK + R+ + EV IM+
Sbjct: 26 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRD 82
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
+ N+VE +Y + +VME G L D I+ +E A+V ++ ++V
Sbjct: 83 YQHE-NVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSV 140
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVL 242
H +GV+HRD+K ++ L T + +K++DFGF +E + +VG+ Y++APE++
Sbjct: 141 LHAQGVIHRDIKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 197
Query: 243 RR-RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
R YG E+DIWS G+++ ++ G PP++ E I + N+ +S K
Sbjct: 198 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLK 256
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFR 350
+ R+L +DP +R TAAE+L+HP+L ++G + +++ M+Q R
Sbjct: 257 GFLDRLLVRDPAQRATAAELLKHPFLAKAGPPA------SIVPLMRQNR 299
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 154/289 (53%), Gaps = 17/289 (5%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D +S+ ++G G GI+ + S+G+ A K + RK + R+ + EV IM+
Sbjct: 71 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRD 127
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
+ N+VE +Y + +VME G L D I+ +E A+V ++ ++V
Sbjct: 128 YQHE-NVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSV 185
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVL 242
H +GV+HRD+K ++ L T + +K++DFGF +E + +VG+ Y++APE++
Sbjct: 186 LHAQGVIHRDIKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 242
Query: 243 RR-RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
R YG E+DIWS G+++ ++ G PP++ E I + N+ +S K
Sbjct: 243 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLK 301
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFR 350
+ R+L +DP +R TAAE+L+HP+L ++G + +++ M+Q R
Sbjct: 302 GFLDRLLVRDPAQRATAAELLKHPFLAKAGPPA------SIVPLMRQNR 344
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 154/289 (53%), Gaps = 17/289 (5%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D +S+ ++G G GI+ + S+G+ A K + RK + R+ + EV IM+
Sbjct: 28 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRD 84
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
+ N+VE +Y + +VME G L D I+ +E A+V ++ ++V
Sbjct: 85 YQHE-NVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSV 142
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVL 242
H +GV+HRD+K ++ L T + +K++DFGF +E + +VG+ Y++APE++
Sbjct: 143 LHAQGVIHRDIKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 199
Query: 243 RR-RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
R YG E+DIWS G+++ ++ G PP++ E I + N+ +S K
Sbjct: 200 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLK 258
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFR 350
+ R+L +DP +R TAAE+L+HP+L ++G + +++ M+Q R
Sbjct: 259 GFLDRLLVRDPAQRATAAELLKHPFLAKAGPPA------SIVPLMRQNR 301
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 154/289 (53%), Gaps = 17/289 (5%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D +S+ ++G G GI+ + S+G+ A K + RK + R+ + EV IM+
Sbjct: 17 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRD 73
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
+ N+VE +Y + +VME G L D I+ +E A+V ++ ++V
Sbjct: 74 YQHE-NVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSV 131
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVL 242
H +GV+HRD+K ++ L T + +K++DFGF +E + +VG+ Y++APE++
Sbjct: 132 LHAQGVIHRDIKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 188
Query: 243 RR-RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
R YG E+DIWS G+++ ++ G PP++ E I + N+ +S K
Sbjct: 189 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLK 247
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFR 350
+ R+L +DP +R TAAE+L+HP+L ++G + +++ M+Q R
Sbjct: 248 GFLDRLLVRDPAQRATAAELLKHPFLAKAGPPA------SIVPLMRQNR 290
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 154/289 (53%), Gaps = 17/289 (5%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D +S+ ++G G GI+ + S+G+ A K + RK + R+ + EV IM+
Sbjct: 21 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRD 77
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
+ N+VE +Y + +VME G L D I+ +E A+V ++ ++V
Sbjct: 78 YQHE-NVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSV 135
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVL 242
H +GV+HRD+K ++ L T + +K++DFGF +E + +VG+ Y++APE++
Sbjct: 136 LHAQGVIHRDIKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 192
Query: 243 RR-RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
R YG E+DIWS G+++ ++ G PP++ E I + N+ +S K
Sbjct: 193 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLK 251
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFR 350
+ R+L +DP +R TAAE+L+HP+L ++G + +++ M+Q R
Sbjct: 252 GFLDRLLVRDPAQRATAAELLKHPFLAKAGPPA------SIVPLMRQNR 294
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LAGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN + D+ +KVTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIXNHKWF 298
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLPNGVNDIKNHKWF 297
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 148/277 (53%), Gaps = 19/277 (6%)
Query: 68 HYTMGKELGRGQYGIIYLCIENS---TGRQFACKSVAKRKLVSKTDRDDIKR-EVQIMQH 123
++ + K LG G YG ++L + S TG+ +A K + K +V K + R E Q+++H
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
+ P +V A++ +H++++ GELF + + ++E +I+ +
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEH 174
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS--FFFEEGKVYRDIVGSAYYVAPEV 241
H G+++RD+K EN L D N + +TDFG S F +E + D G+ Y+AP++
Sbjct: 175 LHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 231
Query: 242 LR---RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPT-IS 297
+R + K +D WS GV++Y LL+G PF + EK A + I P+P +S
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRILKSEPPYPQEMS 290
Query: 298 SGAKDLVRRMLTQDPKKRI-----TAAEVLEHPWLKE 329
+ AKDL++R+L +DPKKR+ A E+ EH + ++
Sbjct: 291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LXGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 131/257 (50%), Gaps = 12/257 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ GK LG G + + L E +T R++A K + KR ++ + + RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
V+ ++D ++ + +G L I G + E +I+ + H KG
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYR--DIVGSAYYVAPEVLRRR 245
++HRDLKPEN L +E+ +++TDFG + E K R VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 246 YG-KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
K D+W+ G I+Y L++G+PPF A E IF I++ DF +P A+DLV
Sbjct: 210 SASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 265
Query: 305 RRMLTQDPKKRITAAEV 321
++L D KR+ E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 98
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 159 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 213
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 269
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 270 LTKRFGNLKNGVNDIKNHKWF 290
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 126
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 187 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 241
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWF 318
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN + D+ +KVTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 150/283 (53%), Gaps = 25/283 (8%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
++G G GI+ + E TG+Q A K + RK + R+ + EV IM+ N+V+
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYH-HDNVVDM 107
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRD 193
+Y + +VME G L D I+ +E A+V ++ ++ H +GV+HRD
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 166
Query: 194 LKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGKEID 251
+K ++ L TS+ +K++DFGF +E + +VG+ Y++APEV+ R YG E+D
Sbjct: 167 IKSDSILLTSDGR---IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVD 223
Query: 252 IWSAGVILYILLSGVPPFWAETE----KGIFDAILQGNIDFDSAPWPTISSGAKDLVRRM 307
IWS G+++ ++ G PP++ E + I D++ D +SS + + M
Sbjct: 224 IWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHK-----VSSVLRGFLDLM 278
Query: 308 LTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFR 350
L ++P +R TA E+L HP+LK +G S ++ M+Q+R
Sbjct: 279 LVREPSQRATAQELLGHPFLKLAGPPS------CIVPLMRQYR 315
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 126
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ +G + + G+ Y+APE +L + Y K +D
Sbjct: 187 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGATW-TLCGTPEYLAPEIILSKGYNKAVD 241
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWF 318
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTW-TLCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 277
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G ++E A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEIXINKMLNHE- 64
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 241 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 126
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G + E A I+ H+ +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 187 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 241
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWF 318
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEIXINKMLNHE- 65
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 242 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 65
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 242 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 91
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 151
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 152 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTW-TLCGTPEYLAPEIILSKGYNKAVD 206
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 207 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 262
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 263 LTKRFGNLKDGVNDIKNHKWF 283
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN + D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G + E A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEIXINKMLNHE- 64
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 241 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 100
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G + E A I+ H+ +++R
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 160
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 161 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 215
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 216 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 271
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 272 LTKRFGNLKNGVNDIKNHKWF 292
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G + E A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 64
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 241 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 64
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 241 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 65
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 242 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 65
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 242 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 63
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 124 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 239
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 240 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 272
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 65
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 242 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 65
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 242 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN + D+ +KVTDFG + + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLTK 106
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN + D+ +KVTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G + E A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLTK 106
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN + D+ +KVTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 139/261 (53%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN + D+ ++VTDFGF+ +G+ + + G+ Y+APE ++ + Y K +D
Sbjct: 166 DLKPENLII---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIIISKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 98
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G + E A I+ H+ +++R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 159 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 213
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVD 269
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 270 LTKRFGNLKNGVNDIKNHKWF 290
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 64
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 241 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 64
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 241 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ +G+ + + G+ Y+AP +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPAIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 64
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 304 VRRMLTQDPKKRITAAEVLEHPW 326
+ ++L ++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G + E A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN + D+ +KVTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 134/243 (55%), Gaps = 11/243 (4%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ +G+ + + G+ Y+APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKK 314
K
Sbjct: 277 LTK 279
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 64
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 241 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 64
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 304 VRRMLTQDPKKRITAAEVLEHPW 326
+ ++L ++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 64
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 304 VRRMLTQDPKKRITAAEVLEHPW 326
+ ++L ++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 65
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 304 VRRMLTQDPKKRITAAEVLEHPW 326
+ ++L ++P RIT ++ + W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K +G G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ +KV DFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G + E A I+ H+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G + E A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 64
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 304 VRRMLTQDPKKRITAAEVLEHPW 326
+ ++L ++P RIT ++ + W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G + E A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN + D+ ++VTDFG + + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLMI---DQQGYIQVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 129/264 (48%), Gaps = 12/264 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLS-GQ 127
Y K++G G +G+ L + T A K + + + ++++RE I+ H S
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----ENVQRE--IINHRSLRH 75
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
PNIV FK + I+ME + GEL++RI G +SE A F+ ++ V+ CH+
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM 135
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRY- 246
+ HRDLK EN L + +K+ DFG+S + VG+ Y+APEVL R+
Sbjct: 136 QICHRDLKLENTLLDGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEY 194
Query: 247 -GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG--NIDFDSAPWPTISSGAKDL 303
GK D+WS GV LY++L G PF E + +Q ++ + IS L
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHL 254
Query: 304 VRRMLTQDPKKRITAAEVLEHPWL 327
+ R+ DP RI+ E+ H W
Sbjct: 255 ISRIFVADPATRISIPEIKTHSWF 278
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 138/259 (53%), Gaps = 15/259 (5%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG+G +G + L E +TGR +A K + K +++K + E +++Q+ + P +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 72
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
K A++ + VME GELF + + ++E A +I+ + H++ VV+R
Sbjct: 73 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 132
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGKEI 250
D+K EN + D++ +K+TDFG +G + G+ Y+APEVL YG+ +
Sbjct: 133 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 189
Query: 251 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQ 310
D W GV++Y ++ G PF+ + + +F+ IL I F T+S AK L+ +L +
Sbjct: 190 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKK 245
Query: 311 DPKKRI-----TAAEVLEH 324
DPK+R+ A EV+EH
Sbjct: 246 DPKQRLGGGPSDAKEVMEH 264
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L +G +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME A GE+F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-VLRRRYGKEID 251
DLKPEN L D+ ++VTDFGF+ +G+ + + G+ +APE +L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEALAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G YG + L + T A K V ++ V + +IK+E+ I L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINAMLNHE- 65
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 304 VRRMLTQDPKKRITAAEVLEHPW 326
+ ++L ++P RIT ++ + W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 138/259 (53%), Gaps = 15/259 (5%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG+G +G + L E +TGR +A K + K +++K + E +++Q+ + P +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
K A++ + VME GELF + + ++E A +I+ + H++ VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGKEI 250
D+K EN + D++ +K+TDFG +G + G+ Y+APEVL YG+ +
Sbjct: 130 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 251 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQ 310
D W GV++Y ++ G PF+ + + +F+ IL I F T+S AK L+ +L +
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKK 242
Query: 311 DPKKRI-----TAAEVLEH 324
DPK+R+ A EV+EH
Sbjct: 243 DPKQRLGGGPSDAKEVMEH 261
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 138/259 (53%), Gaps = 15/259 (5%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG+G +G + L E +TGR +A K + K +++K + E +++Q+ + P +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
K A++ + VME GELF + + ++E A +I+ + H++ VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGKEI 250
D+K EN + D++ +K+TDFG +G + G+ Y+APEVL YG+ +
Sbjct: 130 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 251 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQ 310
D W GV++Y ++ G PF+ + + +F+ IL I F T+S AK L+ +L +
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKK 242
Query: 311 DPKKRI-----TAAEVLEH 324
DPK+R+ A EV+EH
Sbjct: 243 DPKQRLGGGPSDAKEVMEH 261
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 138/259 (53%), Gaps = 15/259 (5%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG+G +G + L E +TGR +A K + K +++K + E +++Q+ + P +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
K A++ + VME GELF + + ++E A +I+ + H++ VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGKEI 250
D+K EN + D++ +K+TDFG +G + G+ Y+APEVL YG+ +
Sbjct: 130 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 251 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQ 310
D W GV++Y ++ G PF+ + + +F+ IL I F T+S AK L+ +L +
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKK 242
Query: 311 DPKKRI-----TAAEVLEH 324
DPK+R+ A EV+EH
Sbjct: 243 DPKQRLGGGPSDAKEVMEH 261
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 136/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG G +G + L TG +A K + K+K+V + E +I+Q ++ P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLTK 106
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME GE+F + G + E A I+ H+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN + D+ +KVTDFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 138/259 (53%), Gaps = 15/259 (5%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG+G +G + L E +TGR +A K + K +++K + E +++Q+ + P +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
K A++ + VME GELF + + ++E A +I+ + H++ VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGKEI 250
D+K EN + D++ +K+TDFG +G + G+ Y+APEVL YG+ +
Sbjct: 130 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 251 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQ 310
D W GV++Y ++ G PF+ + + +F+ IL I F T+S AK L+ +L +
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKK 242
Query: 311 DPKKRI-----TAAEVLEH 324
DPK+R+ A EV+EH
Sbjct: 243 DPKQRLGGGPSDAKEVMEH 261
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 156/304 (51%), Gaps = 21/304 (6%)
Query: 34 IQEPAAPEAQFSGPEPLPHSP----DTILGKPYEDVK-SHYTMGKELGRGQYGIIYLCIE 88
+++ AA E F P +S + L KP V + + K LG+G +G + L E
Sbjct: 110 LKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKE 169
Query: 89 NSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVME 148
+TGR +A K + K +V+K + E +++Q+ S P + K +++ + VME
Sbjct: 170 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYSFQTHDRLCFVME 228
Query: 149 LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHT-KGVVHRDLKPENFLFTSNDEN 207
GELF + + +SE A +I+ ++ H+ K VV+RDLK EN + D++
Sbjct: 229 YANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKD 285
Query: 208 AIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLSG 265
+K+TDFG ++G + G+ Y+APEVL YG+ +D W GV++Y ++ G
Sbjct: 286 GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
Query: 266 VPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI-----TAAE 320
PF+ + + +F+ IL I F T+ AK L+ +L +DPK+R+ A E
Sbjct: 346 RLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKE 401
Query: 321 VLEH 324
+++H
Sbjct: 402 IMQH 405
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 138/259 (53%), Gaps = 15/259 (5%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG+G +G + L E +TGR +A K + K +++K + E +++Q+ + P +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 74
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
K A++ + VME GELF + + ++E A +I+ + H++ VV+R
Sbjct: 75 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 134
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGKEI 250
D+K EN + D++ +K+TDFG +G + G+ Y+APEVL YG+ +
Sbjct: 135 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 191
Query: 251 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQ 310
D W GV++Y ++ G PF+ + + +F+ IL I F T+S AK L+ +L +
Sbjct: 192 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKK 247
Query: 311 DPKKRI-----TAAEVLEH 324
DPK+R+ A EV+EH
Sbjct: 248 DPKQRLGGGPSDAKEVMEH 266
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 136/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
+ LG G +G + L TG +A K + K+K+V + E +I Q ++ P +V+
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF-PFLVK 106
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++V+E GE+F + G +SE A I+ H+ +++R
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ +KV DFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 167 DLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 138/259 (53%), Gaps = 15/259 (5%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG+G +G + L E +TGR +A K + K +++K + E +++Q+ + P +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
K A++ + VME GELF + + ++E A +I+ + H++ VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGKEI 250
D+K EN + D++ +K+TDFG +G + G+ Y+APEVL YG+ +
Sbjct: 130 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 251 DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQ 310
D W GV++Y ++ G PF+ + + +F+ IL I F T+S AK L+ +L +
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKK 242
Query: 311 DPKKRI-----TAAEVLEH 324
DPK+R+ A EV+EH
Sbjct: 243 DPKQRLGGGPSDAKEVMEH 261
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K +G G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME G++F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ +KV DFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 138/265 (52%), Gaps = 19/265 (7%)
Query: 75 LGRGQYGIIYLC---IENSTGRQFACKSVAKRKLV-SKTDRDDIKREVQIMQHLSGQPNI 130
LG+G YG ++ +TG+ FA K + K +V + D K E I++ + P I
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPFI 83
Query: 131 VEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVV 190
V+ A++ +++++E + GELF ++ +G + E A +I + H KG++
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 191 HRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGK 248
+RDLKPEN + + +K+TDFG +G V G+ Y+APE+L R + +
Sbjct: 144 YRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNR 200
Query: 249 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRML 308
+D WS G ++Y +L+G PPF E K D IL+ ++ P ++ A+DL++++L
Sbjct: 201 AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLL 256
Query: 309 TQDPKKRIT-----AAEVLEHPWLK 328
++ R+ A EV HP+ +
Sbjct: 257 KRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K +G G +G + L TG +A K + K+K+V + E +I+Q ++ P +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
+ +++D +++VME G++F + G +SE A I+ H+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEID 251
DLKPEN L D+ +KV DFGF+ + G+ + + G+ Y+APE+ L + Y K +D
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQD 311
W+ GV++Y + +G PPF+A+ I++ I+ G + F S SS KDL+R +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKKRI-----TAAEVLEHPWL 327
KR ++ H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 138/265 (52%), Gaps = 19/265 (7%)
Query: 75 LGRGQYGIIYLC---IENSTGRQFACKSVAKRKLV-SKTDRDDIKREVQIMQHLSGQPNI 130
LG+G YG ++ +TG+ FA K + K +V + D K E I++ + P I
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPFI 83
Query: 131 VEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVV 190
V+ A++ +++++E + GELF ++ +G + E A +I + H KG++
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 191 HRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGK 248
+RDLKPEN + + +K+TDFG +G V G+ Y+APE+L R + +
Sbjct: 144 YRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNR 200
Query: 249 EIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRML 308
+D WS G ++Y +L+G PPF E K D IL+ ++ P ++ A+DL++++L
Sbjct: 201 AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLL 256
Query: 309 TQDPKKRIT-----AAEVLEHPWLK 328
++ R+ A EV HP+ +
Sbjct: 257 KRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 145/268 (54%), Gaps = 13/268 (4%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D K YT +++G+G G +Y ++ +TG++ A + + L + ++ I E+ +M+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRE 73
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
+ PNIV + +Y + +VME A G L D ++ + E A+V R+ + +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYR-DIVGSAYYVAPEVL 242
H+ V+HRD+K +N L + +K+TDFGF + R ++VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV 188
Query: 243 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETE-KGIFDAILQGNIDFDSAPWPTISSGA 300
R+ YG ++DIWS G++ ++ G PP+ E + ++ G + + +S+
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIF 246
Query: 301 KDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+D + R L D +KR +A E+L+H +LK
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 134/273 (49%), Gaps = 12/273 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + LG G G + L + T A K V ++ V + +IK+E+ I + L+ +
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLNHE- 64
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
N+V+F G + ++ +E C+ GELFDRI E A F +M V H G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG---KVYRDIVGSAYYVAPEVLRRR 245
+ HRD+KPEN L DE +K++DFG + F ++ + G+ YVAPE+L+RR
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 246 --YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
+ + +D+WS G++L +L+G P W + + PW I S L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKESGKASDK 336
+ ++L ++P RIT ++ + W + K K
Sbjct: 241 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 144/268 (53%), Gaps = 13/268 (4%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D K YT +++G+G G +Y ++ +TG++ A + + L + ++ I E+ +M+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRE 73
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
+ PNIV + +Y + +VME A G L D ++ + E A+V R+ + +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVL 242
H+ V+HRD+K +N L + +K+TDFGF + R +VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 188
Query: 243 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETE-KGIFDAILQGNIDFDSAPWPTISSGA 300
R+ YG ++DIWS G++ ++ G PP+ E + ++ G + + +S+
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIF 246
Query: 301 KDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+D + R L D +KR +A E+L+H +LK
Sbjct: 247 RDFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 144/268 (53%), Gaps = 13/268 (4%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D K YT +++G+G G +Y ++ +TG++ A + + L + ++ I E+ +M+
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRE 73
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
+ PNIV + +Y + +VME A G L D ++ + E A+V R+ + +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVL 242
H+ V+HRD+K +N L + +K+TDFGF + R +VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 243 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETE-KGIFDAILQGNIDFDSAPWPTISSGA 300
R+ YG ++DIWS G++ ++ G PP+ E + ++ G + + +S+
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIF 246
Query: 301 KDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+D + R L D +KR +A E+L+H +LK
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 145/276 (52%), Gaps = 17/276 (6%)
Query: 58 LGKPYEDVK-SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKR 116
L KP V + + K LG+G +G + L E +TGR +A K + K +V+K +
Sbjct: 141 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 200
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRD 176
E +++Q+ S P + K +++ + VME GELF + + +SE A +
Sbjct: 201 ENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 177 IMHVVNVCHT-KGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSA 234
I+ ++ H+ K VV+RDLK EN + D++ +K+TDFG ++G + G+
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP 316
Query: 235 YYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPW 293
Y+APEVL YG+ +D W GV++Y ++ G PF+ + + +F+ IL I F
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR--- 373
Query: 294 PTISSGAKDLVRRMLTQDPKKRI-----TAAEVLEH 324
T+ AK L+ +L +DPK+R+ A E+++H
Sbjct: 374 -TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 408
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 139/260 (53%), Gaps = 16/260 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG+G +G + L E +TGR +A K + K +V+K + E +++Q+ S P +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 74
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHT-KGVVH 191
K +++ + VME GELF + + +SE A +I+ ++ H+ K VV+
Sbjct: 75 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 134
Query: 192 RDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGKE 249
RDLK EN + D++ +K+TDFG ++G + G+ Y+APEVL YG+
Sbjct: 135 RDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA 191
Query: 250 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLT 309
+D W GV++Y ++ G PF+ + + +F+ IL I F T+ AK L+ +L
Sbjct: 192 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLK 247
Query: 310 QDPKKRI-----TAAEVLEH 324
+DPK+R+ A E+++H
Sbjct: 248 KDPKQRLGGGSEDAKEIMQH 267
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 139/260 (53%), Gaps = 16/260 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG+G +G + L E +TGR +A K + K +V+K + E +++Q+ S P +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 73
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHT-KGVVH 191
K +++ + VME GELF + + +SE A +I+ ++ H+ K VV+
Sbjct: 74 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 133
Query: 192 RDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGKE 249
RDLK EN + D++ +K+TDFG ++G + G+ Y+APEVL YG+
Sbjct: 134 RDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 250 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLT 309
+D W GV++Y ++ G PF+ + + +F+ IL I F T+ AK L+ +L
Sbjct: 191 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLK 246
Query: 310 QDPKKRI-----TAAEVLEH 324
+DPK+R+ A E+++H
Sbjct: 247 KDPKQRLGGGSEDAKEIMQH 266
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 139/260 (53%), Gaps = 16/260 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
K LG+G +G + L E +TGR +A K + K +V+K + E +++Q+ S P +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 72
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHT-KGVVH 191
K +++ + VME GELF + + +SE A +I+ ++ H+ K VV+
Sbjct: 73 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 132
Query: 192 RDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGKE 249
RDLK EN + D++ +K+TDFG ++G + G+ Y+APEVL YG+
Sbjct: 133 RDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA 189
Query: 250 IDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLT 309
+D W GV++Y ++ G PF+ + + +F+ IL I F T+ AK L+ +L
Sbjct: 190 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLK 245
Query: 310 QDPKKRI-----TAAEVLEH 324
+DPK+R+ A E+++H
Sbjct: 246 KDPKQRLGGGSEDAKEIMQH 265
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 144/268 (53%), Gaps = 13/268 (4%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D K YT +++G+G G +Y ++ +TG++ A + + L + ++ I E+ +M+
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRE 74
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
+ PNIV + +Y + +VME A G L D ++ + E A+V R+ + +
Sbjct: 75 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 132
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVL 242
H+ V+HRD+K +N L + +K+TDFGF + R +VG+ Y++APEV+
Sbjct: 133 LHSNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 189
Query: 243 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETE-KGIFDAILQGNIDFDSAPWPTISSGA 300
R+ YG ++DIWS G++ ++ G PP+ E + ++ G + + +S+
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIF 247
Query: 301 KDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+D + R L D +KR +A E+++H +LK
Sbjct: 248 RDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 144/268 (53%), Gaps = 13/268 (4%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D K YT +++G+G G +Y ++ +TG++ A + + L + ++ I E+ +M+
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRE 74
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
+ PNIV + +Y + +VME A G L D ++ + E A+V R+ + +
Sbjct: 75 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 132
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVL 242
H+ V+HR++K +N L + +K+TDFGF + R +VG+ Y++APEV+
Sbjct: 133 LHSNQVIHRNIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 189
Query: 243 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETE-KGIFDAILQGNIDFDSAPWPTISSGA 300
R+ YG ++DIWS G++ ++ G PP+ E + ++ G + + +S+
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIF 247
Query: 301 KDLVRRMLTQDPKKRITAAEVLEHPWLK 328
+D + R L D +KR +A E+++H +LK
Sbjct: 248 RDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 49/304 (16%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK----REVQIMQHLSGQPN 129
++G G YG+++ C TG + VA +K + D IK RE+++++ L PN
Sbjct: 10 KIGEGSYGVVFKCRNRDTG-----QIVAIKKFLESEDDPVIKKIALREIRMLKQLK-HPN 63
Query: 130 IVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
+V + R +H+V E C L + + E S+ + VN CH
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVL--RRRY 246
+HRD+KPEN L T +++++K+ DFGF+ Y D V + +Y +PE+L +Y
Sbjct: 124 IHRDVKPENILIT---KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETE--------KGIFDAILQGNIDF---------- 288
G +D+W+ G + LLSGVP + +++ K + D I + F
Sbjct: 181 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240
Query: 289 -----DSAP----WPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPW------LKESGKA 333
D P +P IS A L++ L DP +R+T ++L HP+ +++ K
Sbjct: 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLAKE 300
Query: 334 SDKP 337
DKP
Sbjct: 301 HDKP 304
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 148/282 (52%), Gaps = 14/282 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + K +GRG +G + L ++ + +A K ++K +++ ++D E IM + P
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 135
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
+V+ A++D +++++VME G+L + +++ E+ A +++ ++ H+ G
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEE-GKVYRDI-VGSAYYVAPEVLRRR- 245
++HRD+KP+N L D++ +K+ DFG +E G V+ D VG+ Y++PEVL+ +
Sbjct: 195 LIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 246 ----YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
YG+E D WS GV L+ +L G PF+A++ G + I+ IS AK
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAK 311
Query: 302 DLVRRMLTQDPKK--RITAAEVLEHPWLKESGKASDKPIDTA 341
+L+ LT + R E+ +HP+ K D +TA
Sbjct: 312 NLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETA 353
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 37/291 (12%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT----------------- 109
+ YT+ E+G+G YG++ L + +A K ++K+KL+ +
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 110 ------DRDDIKREVQIMQHLSGQPNIVEFKGAYEDMR--FVHIVMELCADGELFDRIIA 161
+ + +E+ I++ L PN+V+ +D +++V EL G + +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL 131
Query: 162 KGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF 221
K SE A F+D++ + H + ++HRD+KP N L E+ +K+ DFG S F
Sbjct: 132 K-PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEF 187
Query: 222 E-EGKVYRDIVGSAYYVAPEVL---RRRY-GKEIDIWSAGVILYILLSGVPPFWAETEKG 276
+ + + VG+ ++APE L R+ + GK +D+W+ GV LY + G PF E
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247
Query: 277 IFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+ I ++F P I+ KDL+ RML ++P+ RI E+ HPW+
Sbjct: 248 LHSKIKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 148/285 (51%), Gaps = 20/285 (7%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + K +GRG +G + L ST + +A K ++K +++ ++D E IM + P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 134
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
+V+ A++D R++++VME G+L + +++ E+ A +++ ++ H+ G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDI-VGSAYYVAPEVLRRR- 245
+HRD+KP+N L D++ +K+ DFG +EG V D VG+ Y++PEVL+ +
Sbjct: 194 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 246 ----YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWP---TISS 298
YG+E D WS GV LY +L G PF+A++ G + I+ +S +P IS
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK---NSLTFPDDNDISK 307
Query: 299 GAKDLVRRMLTQDPKK--RITAAEVLEHPWLKESGKASDKPIDTA 341
AK+L+ LT + R E+ H + K A + DT
Sbjct: 308 EAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTV 352
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 148/285 (51%), Gaps = 20/285 (7%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + K +GRG +G + L ST + +A K ++K +++ ++D E IM + P
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 129
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
+V+ A++D R++++VME G+L + +++ E+ A +++ ++ H+ G
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMG 188
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDI-VGSAYYVAPEVLRRR- 245
+HRD+KP+N L D++ +K+ DFG +EG V D VG+ Y++PEVL+ +
Sbjct: 189 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 246 ----YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWP---TISS 298
YG+E D WS GV LY +L G PF+A++ G + I+ +S +P IS
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK---NSLTFPDDNDISK 302
Query: 299 GAKDLVRRMLTQDPKK--RITAAEVLEHPWLKESGKASDKPIDTA 341
AK+L+ LT + R E+ H + K A + DT
Sbjct: 303 EAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTV 347
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 148/285 (51%), Gaps = 20/285 (7%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y + K +GRG +G + L ST + +A K ++K +++ ++D E IM + P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 134
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
+V+ A++D R++++VME G+L + +++ E+ A +++ ++ H+ G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDI-VGSAYYVAPEVLRRR- 245
+HRD+KP+N L D++ +K+ DFG +EG V D VG+ Y++PEVL+ +
Sbjct: 194 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 246 ----YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWP---TISS 298
YG+E D WS GV LY +L G PF+A++ G + I+ +S +P IS
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK---NSLTFPDDNDISK 307
Query: 299 GAKDLVRRMLTQDPKK--RITAAEVLEHPWLKESGKASDKPIDTA 341
AK+L+ LT + R E+ H + K A + DT
Sbjct: 308 EAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTV 352
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 10/271 (3%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G + + + T FA K V K L+ R+ + E+ I + L+ Q ++V F
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 87
Query: 135 GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDL 194
G +ED FV +V+ELC L + + +E A R I+ H V+HRDL
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 195 KPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDI 252
K N +E+ +K+ DFG + E +G+ + + G+ Y+APEVL ++ + E+D+
Sbjct: 148 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 204
Query: 253 WSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDP 312
WS G I+Y LL G PPF K + I + I+ A L+++ML DP
Sbjct: 205 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDP 260
Query: 313 KKRITAAEVLEHPWLKESGKASDKPIDTAVI 343
R T E+L + + PI I
Sbjct: 261 TARPTINELLNDEFFTSGYIPARLPITCLTI 291
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 10/271 (3%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G + + + T FA K V K L+ R+ + E+ I + L+ Q ++V F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 83
Query: 135 GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDL 194
G +ED FV +V+ELC L + + +E A R I+ H V+HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 195 KPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDI 252
K N +E+ +K+ DFG + E +G+ + + G+ Y+APEVL ++ + E+D+
Sbjct: 144 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 253 WSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDP 312
WS G I+Y LL G PPF K + I + I+ A L+++ML DP
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDP 256
Query: 313 KKRITAAEVLEHPWLKESGKASDKPIDTAVI 343
R T E+L + + PI I
Sbjct: 257 TARPTINELLNDEFFTSGYIPARLPITCLTI 287
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 10/271 (3%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G + + + T FA K V K L+ R+ + E+ I + L+ Q ++V F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 83
Query: 135 GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDL 194
G +ED FV +V+ELC L + + +E A R I+ H V+HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 195 KPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDI 252
K N +E+ +K+ DFG + E +G+ + + G+ Y+APEVL ++ + E+D+
Sbjct: 144 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 253 WSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDP 312
WS G I+Y LL G PPF K + I + I+ A L+++ML DP
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDP 256
Query: 313 KKRITAAEVLEHPWLKESGKASDKPIDTAVI 343
R T E+L + + PI I
Sbjct: 257 TARPTINELLNDEFFTSGYIPARLPITCLTI 287
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 10/271 (3%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G + + + T FA K V K L+ R+ + E+ I + L+ Q ++V F
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 105
Query: 135 GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDL 194
G +ED FV +V+ELC L + + +E A R I+ H V+HRDL
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 195 KPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDI 252
K N +E+ +K+ DFG + E +G+ + + G+ Y+APEVL ++ + E+D+
Sbjct: 166 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 222
Query: 253 WSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDP 312
WS G I+Y LL G PPF K + I + I+ A L+++ML DP
Sbjct: 223 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDP 278
Query: 313 KKRITAAEVLEHPWLKESGKASDKPIDTAVI 343
R T E+L + + PI I
Sbjct: 279 TARPTINELLNDEFFTSGYIPARLPITCLTI 309
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 10/271 (3%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G + + + T FA K V K L+ R+ + E+ I + L+ Q ++V F
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 107
Query: 135 GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDL 194
G +ED FV +V+ELC L + + +E A R I+ H V+HRDL
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 195 KPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDI 252
K N +E+ +K+ DFG + E +G+ + + G+ Y+APEVL ++ + E+D+
Sbjct: 168 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 224
Query: 253 WSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDP 312
WS G I+Y LL G PPF K + I + I+ A L+++ML DP
Sbjct: 225 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDP 280
Query: 313 KKRITAAEVLEHPWLKESGKASDKPIDTAVI 343
R T E+L + + PI I
Sbjct: 281 TARPTINELLNDEFFTSGYIPARLPITCLTI 311
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 10/271 (3%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G + + + T FA K V K L+ R+ + E+ I + L+ Q ++V F
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 81
Query: 135 GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDL 194
G +ED FV +V+ELC L + + +E A R I+ H V+HRDL
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 195 KPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDI 252
K N +E+ +K+ DFG + E +G+ + + G+ Y+APEVL ++ + E+D+
Sbjct: 142 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 198
Query: 253 WSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDP 312
WS G I+Y LL G PPF K + I + I+ A L+++ML DP
Sbjct: 199 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDP 254
Query: 313 KKRITAAEVLEHPWLKESGKASDKPIDTAVI 343
R T E+L + + PI I
Sbjct: 255 TARPTINELLNDEFFTSGYIPARLPITCLTI 285
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 135/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 36 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 95
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 96 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 155
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 212
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I++G
Sbjct: 213 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG 266
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +SS + L+R L P R T E+ HPW+++
Sbjct: 267 QVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 135/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 8 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 67
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 68 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 127
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 128 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 184
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I++G
Sbjct: 185 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG 238
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +SS + L+R L P R T E+ HPW+++
Sbjct: 239 QVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 135/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 9 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 68
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 69 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 128
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 185
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I++G
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG 239
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +SS + L+R L P R T E+ HPW+++
Sbjct: 240 QVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 135/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 28 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 87
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 88 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 147
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 148 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 204
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I++G
Sbjct: 205 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG 258
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +SS + L+R L P R T E+ HPW+++
Sbjct: 259 QVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 135/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 21 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 80
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 81 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 140
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 197
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I++G
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG 251
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +SS + L+R L P R T E+ HPW+++
Sbjct: 252 QVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 134/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 22 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 81
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 82 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 141
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 198
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I+ G
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGG 252
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +SS + L+R L P R T E+ HPW+++
Sbjct: 253 QVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 134/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 22 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 81
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 82 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 141
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 198
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I+ G
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGG 252
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +SS + L+R L P R T E+ HPW+++
Sbjct: 253 QVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 134/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 21 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 80
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 81 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 140
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 197
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I+ G
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGG 251
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +SS + L+R L P R T E+ HPW+++
Sbjct: 252 QVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 133/277 (48%), Gaps = 20/277 (7%)
Query: 60 KPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKR--- 116
K E ++S Y +G LG G +G +Y I S A K V K ++ + + R
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 117 EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVF 174
EV +++ +S G ++ +E FV I+ + +LFD I +G E A S F
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA 234
++ V CH GV+HRD+K EN L N +K+ DFG ++ VY D G+
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTR 177
Query: 235 YYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAP 292
Y PE +R R +G+ +WS G++LY ++ G PF + E I++G + F
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ-- 229
Query: 293 WPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+SS + L+R L P R T E+ HPW+++
Sbjct: 230 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 130/258 (50%), Gaps = 14/258 (5%)
Query: 67 SHYTMGKELGRGQYGIIYLC--IENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
S + + K LG+G +G ++L I S RQ V K+ + DR K E I+ +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVC 184
+ P IV+ A++ ++++++ G+LF R+ + ++E ++ ++
Sbjct: 84 N-HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 185 HTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS--FFFEEGKVYRDIVGSAYYVAPEVL 242
H+ G+++RDLKPEN L DE +K+TDFG S E K Y G+ Y+APEV+
Sbjct: 143 HSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEVV 198
Query: 243 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
RR + + D WS GV+++ +L+G PF + K IL+ + +S A+
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF----LSPEAQ 254
Query: 302 DLVRRMLTQDPKKRITAA 319
L+R + ++P R+ A
Sbjct: 255 SLLRMLFKRNPANRLGAG 272
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 134/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 21 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 80
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 81 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 140
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 197
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I+ G
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGG 251
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +SS + L+R L P R T E+ HPW+++
Sbjct: 252 QVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 130/258 (50%), Gaps = 14/258 (5%)
Query: 67 SHYTMGKELGRGQYGIIYLC--IENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
S + + K LG+G +G ++L I S RQ V K+ + DR K E I+ +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVC 184
+ P IV+ A++ ++++++ G+LF R+ + ++E ++ ++
Sbjct: 85 N-HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 143
Query: 185 HTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS--FFFEEGKVYRDIVGSAYYVAPEVL 242
H+ G+++RDLKPEN L DE +K+TDFG S E K Y G+ Y+APEV+
Sbjct: 144 HSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEVV 199
Query: 243 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
RR + + D WS GV+++ +L+G PF + K IL+ + +S A+
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQ 255
Query: 302 DLVRRMLTQDPKKRITAA 319
L+R + ++P R+ A
Sbjct: 256 SLLRMLFKRNPANRLGAG 273
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 130/258 (50%), Gaps = 14/258 (5%)
Query: 67 SHYTMGKELGRGQYGIIYLC--IENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
S + + K LG+G +G ++L I S RQ V K+ + DR K E I+ +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVC 184
+ P IV+ A++ ++++++ G+LF R+ + ++E ++ ++
Sbjct: 84 N-HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 185 HTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS--FFFEEGKVYRDIVGSAYYVAPEVL 242
H+ G+++RDLKPEN L DE +K+TDFG S E K Y G+ Y+APEV+
Sbjct: 143 HSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEVV 198
Query: 243 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
RR + + D WS GV+++ +L+G PF + K IL+ + +S A+
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQ 254
Query: 302 DLVRRMLTQDPKKRITAA 319
L+R + ++P R+ A
Sbjct: 255 SLLRMLFKRNPANRLGAG 272
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 134/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 41 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 100
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 101 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 160
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 161 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 217
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I++G
Sbjct: 218 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG 271
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +S + L+R L P R T E+ HPW+++
Sbjct: 272 QVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 134/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 9 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 68
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 69 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 128
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 185
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I++G
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG 239
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +S + L+R L P R T E+ HPW+++
Sbjct: 240 QVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 134/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 8 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 67
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 68 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 127
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 128 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 184
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I++G
Sbjct: 185 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG 238
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +S + L+R L P R T E+ HPW+++
Sbjct: 239 QVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 134/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 9 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 68
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 69 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 128
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 185
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I++G
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG 239
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +S + L+R L P R T E+ HPW+++
Sbjct: 240 QVFFRQ----RVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 134/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 36 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 95
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 96 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 155
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 212
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I++G
Sbjct: 213 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG 266
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +S + L+R L P R T E+ HPW+++
Sbjct: 267 QVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 20/274 (7%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKR---EVQ 119
E ++S Y +G LG G +G +Y I S A K V K ++ + + R EV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 120 IMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDI 177
+++ +S G ++ +E FV I+ +LFD I +G E A S F +
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYV 237
+ V CH GV+HRD+K EN L N +K+ DFG ++ VY D G+ Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYS 181
Query: 238 APEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPT 295
PE +R R +G+ +WS G++LY ++ G PF + E I++G + F
Sbjct: 182 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----R 231
Query: 296 ISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+SS + L+R L P R T E+ HPW+++
Sbjct: 232 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 132/277 (47%), Gaps = 20/277 (7%)
Query: 60 KPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKR--- 116
K E ++S Y +G LG G +G +Y I S A K V K ++ + + R
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 117 EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVF 174
EV +++ +S G ++ +E FV I+ +LFD I +G E A S F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA 234
++ V CH GV+HRD+K EN L N +K+ DFG ++ VY D G+
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTR 178
Query: 235 YYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAP 292
Y PE +R R +G+ +WS G++LY ++ G PF + E I++G + F
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ-- 230
Query: 293 WPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+SS + L+R L P R T E+ HPW+++
Sbjct: 231 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 133/285 (46%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 22 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 81
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 82 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 141
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 198
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I+ G
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGG 252
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +S + L+R L P R T E+ HPW+++
Sbjct: 253 QVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 132/277 (47%), Gaps = 20/277 (7%)
Query: 60 KPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKR--- 116
K E ++S Y +G LG G +G +Y I S A K V K ++ + + R
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 117 EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVF 174
EV +++ +S G ++ +E FV I+ +LFD I +G E A S F
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA 234
++ V CH GV+HRD+K EN L N +K+ DFG ++ VY D G+
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTR 177
Query: 235 YYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAP 292
Y PE +R R +G+ +WS G++LY ++ G PF + E I++G + F
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ-- 229
Query: 293 WPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+SS + L+R L P R T E+ HPW+++
Sbjct: 230 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 132/277 (47%), Gaps = 20/277 (7%)
Query: 60 KPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKR--- 116
K E ++S Y +G LG G +G +Y I S A K V K ++ + + R
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 117 EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVF 174
EV +++ +S G ++ +E FV I+ +LFD I +G E A S F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA 234
++ V CH GV+HRD+K EN L N +K+ DFG ++ VY D G+
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTR 178
Query: 235 YYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAP 292
Y PE +R R +G+ +WS G++LY ++ G PF + E I++G + F
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ-- 230
Query: 293 WPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+SS + L+R L P R T E+ HPW+++
Sbjct: 231 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 145/285 (50%), Gaps = 12/285 (4%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y +++G G +G L GRQ+ K + ++ SK +R++ +REV ++ ++ P
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREESRREVAVLANMK-HP 83
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHT 186
NIV+++ ++E+ ++IVM+ C G+LF RI A+ + E F I + H
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143
Query: 187 KGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG-KVYRDIVGSAYYVAPEVLRRR 245
+ ++HRD+K +N T ++ +++ DFG + ++ R +G+ YY++PE+ +
Sbjct: 144 RKILHRDIKSQNIFLT---KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENK 200
Query: 246 -YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLV 304
Y + DIW+ G +LY L + F A + K + I+ G+ S + S + LV
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHY---SYDLRSLV 257
Query: 305 RRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQF 349
++ ++P+ R + +LE ++ + + P A F +K F
Sbjct: 258 SQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTF 302
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 133/285 (46%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 21 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 80
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 81 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 140
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 197
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I+ G
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGG 251
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +S + L+R L P R T E+ HPW+++
Sbjct: 252 QVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 133/285 (46%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G +G +Y I S A K V K ++ +
Sbjct: 22 HATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 81
Query: 112 DDIKR---EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ R EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 82 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 141
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 198
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I+ G
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGG 252
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +S + L+R L P R T E+ HPW+++
Sbjct: 253 QVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 129/261 (49%), Gaps = 14/261 (5%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G +G + L T +A K + K ++ D + E +++ L P + +
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 135 GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDL 194
++ + ++ VME G+L I G + E A +I + H +G+++RDL
Sbjct: 87 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDL 146
Query: 195 KPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDI 252
K +N + D +K+ DFG +G R+ G+ Y+APE++ + YGK +D
Sbjct: 147 KLDNVML---DSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDW 203
Query: 253 WSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDP 312
W+ GV+LY +L+G PPF E E +F +I++ N+ + ++S A + + ++T+ P
Sbjct: 204 WAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHP 259
Query: 313 KKRITAA-----EVLEHPWLK 328
KR+ +V EH + +
Sbjct: 260 AKRLGCGPEGERDVREHAFFR 280
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 20/274 (7%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKR---EVQ 119
E ++S Y +G LG G +G +Y I S A K V K ++ + + R EV
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 120 IMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDI 177
+++ +S G ++ +E FV I+ +LFD I +G E A S F +
Sbjct: 63 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 122
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYV 237
+ V CH GV+HRD+K EN L N +K+ DFG ++ VY D G+ Y
Sbjct: 123 LEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYS 179
Query: 238 APEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPT 295
PE +R R +G+ +WS G++LY ++ G PF + E I++G + F
Sbjct: 180 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----R 229
Query: 296 ISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+SS + L+R L P R T E+ HPW+++
Sbjct: 230 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 131/277 (47%), Gaps = 20/277 (7%)
Query: 60 KPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKR--- 116
K E ++S Y +G LG G +G +Y I S A K V K ++ + + R
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 117 EVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVF 174
EV +++ +S G ++ +E FV I+ +LFD I +G E A S F
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 143
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA 234
++ V CH GV+HRD+K EN L N +K+ DFG ++ VY D G+
Sbjct: 144 WQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTR 200
Query: 235 YYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAP 292
Y PE +R R +G+ +WS G++LY ++ G PF + E I++G + F
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ-- 252
Query: 293 WPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+S + L+R L P R T E+ HPW+++
Sbjct: 253 --RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 130/272 (47%), Gaps = 20/272 (7%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKR---EVQIM 121
++S Y +G LG G +G +Y I S A K V K ++ + + R EV ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 122 QHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
+ +S G ++ +E FV I+ +LFD I +G E A S F ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V CH GV+HRD+K EN L N +K+ DFG ++ VY D G+ Y P
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPP 178
Query: 240 EVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
E +R R +G+ +WS G++LY ++ G PF + E I++G + F +S
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVS 228
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
S + L+R L P R T E+ HPW+++
Sbjct: 229 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKR---EVQIM 121
++S Y +G LG G +G +Y I S A K V K ++ + + R EV ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 122 QHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
+ +S G ++ +E FV I+ +LFD I +G E A S F ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V CH GV+HRD+K EN L N +K+ DFG ++ VY D G+ Y P
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPP 178
Query: 240 EVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
E +R R +G+ +WS G++LY ++ G PF + E I++G + F +S
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVS 228
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ L+R L P R T E+ HPW+++
Sbjct: 229 XECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKR---EVQIM 121
++S Y +G LG G +G +Y I S A K V K ++ + + R EV ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 122 QHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
+ +S G ++ +E FV I+ +LFD I +G E A S F ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
V CH GV+HRD+K EN L N +K+ DFG ++ VY D G+ Y P
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPP 178
Query: 240 EVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
E +R R +G+ +WS G++LY ++ G PF + E I+ G + F +S
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVS 228
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
S + L+R L P R T E+ HPW+++
Sbjct: 229 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 137/322 (42%), Gaps = 58/322 (18%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVA---KRKLVSKTDRDDIKREVQI 120
++ S + + LG G YG++ TG A K + K +T RE++I
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-----LREIKI 62
Query: 121 MQHLSGQPNIVEFK----GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRD 176
++H + I F ++E+ V+I+ EL R+I+ S+
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQ 120
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV---------- 226
+ V V H V+HRDLKP N L SN + +KV DFG + +E
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 227 -YRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKG----IFD 279
+ V + +Y APEV+ +Y + +D+WS G IL L P F + IF
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237
Query: 280 AILQGNIDFD--------------------SAP----WPTISSGAKDLVRRMLTQDPKKR 315
I + D D +AP +P ++ DL++RML DP KR
Sbjct: 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKR 297
Query: 316 ITAAEVLEHPWLKESGKASDKP 337
ITA E LEHP+L+ +D+P
Sbjct: 298 ITAKEALEHPYLQTYHDPNDEP 319
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 137/322 (42%), Gaps = 58/322 (18%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVA---KRKLVSKTDRDDIKREVQI 120
++ S + + LG G YG++ TG A K + K +T RE++I
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-----LREIKI 62
Query: 121 MQHLSGQPNIVEFK----GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRD 176
++H + I F ++E+ V+I+ EL R+I+ S+
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQ 120
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV---------- 226
+ V V H V+HRDLKP N L SN + +KV DFG + +E
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 227 -YRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKG----IFD 279
+ V + +Y APEV+ +Y + +D+WS G IL L P F + IF
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237
Query: 280 AILQGNIDFD--------------------SAP----WPTISSGAKDLVRRMLTQDPKKR 315
I + D D +AP +P ++ DL++RML DP KR
Sbjct: 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKR 297
Query: 316 ITAAEVLEHPWLKESGKASDKP 337
ITA E LEHP+L+ +D+P
Sbjct: 298 ITAKEALEHPYLQTYHDPNDEP 319
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 137/322 (42%), Gaps = 58/322 (18%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVA---KRKLVSKTDRDDIKREVQI 120
++ S + + LG G YG++ TG A K + K +T RE++I
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-----LREIKI 62
Query: 121 MQHLSGQPNIVEFK----GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRD 176
++H + I F ++E+ V+I+ EL R+I+ S+
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQ 120
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV---------- 226
+ V V H V+HRDLKP N L SN + +KV DFG + +E
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 227 -YRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKG----IFD 279
+ V + +Y APEV+ +Y + +D+WS G IL L P F + IF
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237
Query: 280 AILQGNIDFD--------------------SAP----WPTISSGAKDLVRRMLTQDPKKR 315
I + D D +AP +P ++ DL++RML DP KR
Sbjct: 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKR 297
Query: 316 ITAAEVLEHPWLKESGKASDKP 337
ITA E LEHP+L+ +D+P
Sbjct: 298 ITAKEALEHPYLQTYHDPNDEP 319
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 20/277 (7%)
Query: 46 GPEPLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL 105
GP PH+ KP S + K +G+G +G + L + +A K + K+ +
Sbjct: 28 GPSSNPHA------KP-----SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAI 76
Query: 106 VSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHY 165
+ K + I E ++ P +V +++ ++ V++ GELF + + +
Sbjct: 77 LKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF 136
Query: 166 SERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEG 224
E A +I + H+ +V+RDLKPEN L D + +TDFG E
Sbjct: 137 LEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHN 193
Query: 225 KVYRDIVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ 283
G+ Y+APEVL ++ Y + +D W G +LY +L G+PPF++ ++D IL
Sbjct: 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN 253
Query: 284 GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAE 320
+ P I++ A+ L+ +L +D KR+ A +
Sbjct: 254 KPLQLK----PNITNSARHLLEGLLQKDRTKRLGAKD 286
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 122/264 (46%), Gaps = 17/264 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G +G + L TG +A K + K ++ D + E +I+ P + +
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF 90
Query: 135 GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDL 194
++ + VME G+L I + E A +I+ + H KG+++RDL
Sbjct: 91 CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDL 150
Query: 195 KPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRDIVGSAYYVAPEVLRRR-YGKEIDI 252
K +N L D K+ DFG G G+ Y+APE+L+ YG +D
Sbjct: 151 KLDNVLL---DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDW 207
Query: 253 WSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPT-ISSGAKDLVRRMLTQD 311
W+ GV+LY +L G PF AE E +F+AIL D +PT + A +++ +T++
Sbjct: 208 WAMGVLLYEMLCGHAPFEAENEDDLFEAILN-----DEVVYPTWLHEDATGILKSFMTKN 262
Query: 312 PKKRITAA------EVLEHPWLKE 329
P R+ + +L HP+ KE
Sbjct: 263 PTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 129/275 (46%), Gaps = 22/275 (8%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD-----IKREVQIMQH 123
Y+ LG G +G ++ ++ ++ K + K K++ +D + E+ I+
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADG-ELFDRIIAKGHYSERAAASVFRDIMHVVN 182
+ NI++ +E+ F +VME G +LF I E A+ +FR ++ V
Sbjct: 86 VE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG 144
Query: 183 VCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL 242
K ++HRD+K EN + E+ +K+ DFG + + E GK++ G+ Y APEVL
Sbjct: 145 YLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVL 201
Query: 243 RRR--YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGA 300
G E+++WS GV LY L+ PF E E+ + AI P +S
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEENPF-CELEETVEAAI---------HPPYLVSKEL 251
Query: 301 KDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASD 335
LV +L P++R T +++ PW+ + +D
Sbjct: 252 MSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLAD 286
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 132/259 (50%), Gaps = 16/259 (6%)
Query: 67 SHYTMGKELGRGQYGIIYLC---IENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
SH+ + K LG+G +G ++L +G +A K V K+ + DR K E I+
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMK-VLKKATLKVRDRVRTKMERDILAD 86
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
++ P +V+ A++ ++++++ G+LF R+ + ++E ++ ++
Sbjct: 87 VN-HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDH 145
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS--FFFEEGKVYRDIVGSAYYVAPEV 241
H+ G+++RDLKPEN L DE +K+TDFG S E K Y G+ Y+APEV
Sbjct: 146 LHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKEAIDHEKKAY-SFCGTVEYMAPEV 201
Query: 242 LRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGA 300
+ R+ + D WS GV+++ +L+G PF + K IL+ + +S+ A
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEA 257
Query: 301 KDLVRRMLTQDPKKRITAA 319
+ L+R + ++P R+ +
Sbjct: 258 QSLLRALFKRNPANRLGSG 276
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 24/288 (8%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD---IKREVQ 119
E ++ Y +G LG+G +G ++ + Q A K + + +++ + D EV
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 120 IMQHLS---GQPNIVEFKGAYEDMRFVHIVMELCADGE-LFDRIIAKGHYSERAAASVFR 175
++ + G P ++ +E +V+E + LFD I KG E + F
Sbjct: 87 LLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFG 146
Query: 176 DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY 235
++ + CH++GVVHRD+K EN L + K+ DFG + + Y D G+
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILI--DLRRGCAKLIDFGSGALLHD-EPYTDFDGTRV 203
Query: 236 YVAPEVLRRR--YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPW 293
Y PE + R + +WS G++LY ++ G PF + E IL+ + F +
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPA--- 254
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTA 341
+S L+RR L P R + E+L PW++ A D P++ +
Sbjct: 255 -HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT--PAEDVPLNPS 299
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 132/288 (45%), Gaps = 38/288 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
+++G G YG++Y +N+ G FA K + K I RE+ I++ L NIV+
Sbjct: 8 EKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTI-REISILKELK-HSNIVK 64
Query: 133 -FKGAYEDMRFVHIVMELCAD-GELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVV 190
+ + R V + L D +L D + +G A S +++ + CH + V+
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 191 HRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVL--RRRYG 247
HRDLKP+N L E +K+ DFG + F + Y V + +Y AP+VL ++Y
Sbjct: 123 HRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK------ 301
IDIWS G I +++G P F +E I + +S WP ++ K
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 302 -------------------DLVRRMLTQDPKKRITAAEVLEHPWLKES 330
DL+ +ML DP +RITA + LEH + KE+
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 27/272 (9%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
++LG G YG +Y I TG+ A K V ++D +I +E+ IMQ P++V+
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVP-----VESDLQEIIKEISIMQQCDS-PHVVK 88
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIMHVVNVCHTKGVVH 191
+ G+Y + IVME C G + D I + +E A++ + + + H +H
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 192 RDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVLRR-RYGKE 249
RD+K N L + K+ DFG + + R+ ++G+ +++APEV++ Y
Sbjct: 149 RDIKAGNILLNTEGH---AKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCV 205
Query: 250 IDIWSAGVILYILLSGVPPFW-AETEKGIFDAILQGNIDFDSAPWPTI------SSGAKD 302
DIWS G+ + G PP+ + IF + P PT S D
Sbjct: 206 ADIWSLGITAIEMAEGKPPYADIHPMRAIF--------MIPTNPPPTFRKPELWSDNFTD 257
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWLKESGKAS 334
V++ L + P++R TA ++L+HP+++ + S
Sbjct: 258 FVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 132/288 (45%), Gaps = 38/288 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
+++G G YG++Y +N+ G FA K + K I RE+ I++ L NIV+
Sbjct: 8 EKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTI-REISILKELK-HSNIVK 64
Query: 133 -FKGAYEDMRFVHIVMELCAD-GELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVV 190
+ + R V + L D +L D + +G A S +++ + CH + V+
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 191 HRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVL--RRRYG 247
HRDLKP+N L E +K+ DFG + F + Y V + +Y AP+VL ++Y
Sbjct: 123 HRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK------ 301
IDIWS G I +++G P F +E I + +S WP ++ K
Sbjct: 180 TTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 302 -------------------DLVRRMLTQDPKKRITAAEVLEHPWLKES 330
DL+ +ML DP +RITA + LEH + KE+
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 40/289 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
+++G G YG++Y +N+ G FA K + K I RE+ I++ L NIV+
Sbjct: 8 EKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTI-REISILKELK-HSNIVK 64
Query: 133 -FKGAYEDMRFVHIVMELCAD-GELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVV 190
+ + R V + L D +L D + +G A S +++ + CH + V+
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 191 HRDLKPENFLFTSNDENAIMKVTDFGF--SFFFEEGKVYRDIVGSAYYVAPEVL--RRRY 246
HRDLKP+N L E +K+ DFG +F K +IV + +Y AP+VL ++Y
Sbjct: 123 HRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKY 178
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK----- 301
IDIWS G I +++G P F +E I + +S WP ++ K
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238
Query: 302 --------------------DLVRRMLTQDPKKRITAAEVLEHPWLKES 330
DL+ +ML DP +RITA + LEH + KE+
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 96/172 (55%)
Query: 338 IDTAVIFRMKQFRAMNKLKKLALKVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKA 397
+ + ++ +K F+ N+LKK+AL +I ++L EI L+ F +D DN+GTLS E+
Sbjct: 22 LSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILD 81
Query: 398 GLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLYKAFQYFDKD 457
GL K+G DI Q ++ D + +G I Y +F+ AT+ + + E F++FD D
Sbjct: 82 GLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDID 141
Query: 458 NSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISYDEFRAMM 509
+G I+V+EL+ F ++ + I ++ EVD + DG I + EF MM
Sbjct: 142 GNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 11 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR-- 67
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 68 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 124
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHT 181
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 242 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 301
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 302 IEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 11 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR-- 67
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 68 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 124
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHT 181
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 242 GILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 301
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 302 IEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 19 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR-- 75
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 76 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 132
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 133 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 189
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 190 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 249
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 250 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 309
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 310 IEVEQALAHPYLEQYYDPSDEPIAEA 335
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 11 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR-- 67
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 68 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 124
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 181
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 242 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 301
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 302 IEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 137/299 (45%), Gaps = 42/299 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQI 120
P+ + Y + + +G G ++ + A K + K +T D++ +E+Q
Sbjct: 9 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEIQA 66
Query: 121 MQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFD---RIIAKGHYS-----ERAAAS 172
M PNIV + ++ + +VM+L + G + D I+AKG + E A+
Sbjct: 67 MSQCH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 125
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG------KV 226
+ R+++ + H G +HRD+K N L E+ +++ DFG S F G KV
Sbjct: 126 ILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKV 182
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
+ VG+ ++APEV+ R Y + DIWS G+ L +G P+ + LQ
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN 242
Query: 285 NIDFDSAPWPTISSGAKD-------------LVRRMLTQDPKKRITAAEVLEHPWLKES 330
+ P++ +G +D ++ L +DP+KR TAAE+L H + +++
Sbjct: 243 DP-------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 15 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR-- 71
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 72 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 128
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHT 185
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 305
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 306 IEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 148/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 13 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR-- 69
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 70 TLREIKILLAFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 126
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSD---LKICDFGLARVADPDHDHT 183
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 184 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 244 GILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 303
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L + SD+PI A
Sbjct: 304 IEVEQALAHPYLAQYYDPSDEPIAEA 329
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 15 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQR-- 71
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 72 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 128
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHT 185
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 305
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 306 IEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 11 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR-- 67
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 68 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 124
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHT 181
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 242 GILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 301
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 302 IEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 149/327 (45%), Gaps = 47/327 (14%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT 109
+P + + G+P+ DV YT + +G G YG++ ++ + A K ++ + +
Sbjct: 27 VPGEVEMVKGQPF-DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYC 85
Query: 110 DRDDIKREVQIMQHLSGQPNIVEFK-----GAYEDMRFVHIVMELCADGELFDRIIAKGH 164
R RE+QI+ + N++ + E MR V+IV +L + +L+ +++
Sbjct: 86 QR--TLREIQILLRFRHE-NVIGIRDILRASTLEAMRDVYIVQDL-METDLY-KLLKSQQ 140
Query: 165 YSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF---- 220
S I+ + H+ V+HRDLKP N L + + +K+ DFG +
Sbjct: 141 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCD---LKICDFGLARIADPE 197
Query: 221 FEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE---- 274
+ + V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 198 HDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
Query: 275 ---KGIFDAILQGNID----------FDSAP----------WPTISSGAKDLVRRMLTQD 311
GI + Q +++ S P +P S A DL+ RMLT +
Sbjct: 258 NHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFN 317
Query: 312 PKKRITAAEVLEHPWLKESGKASDKPI 338
P KRIT E L HP+L++ +D+P+
Sbjct: 318 PNKRITVEEALAHPYLEQYYDPTDEPV 344
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 13 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR-- 69
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 70 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 126
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 183
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 184 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 244 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 303
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 304 IEVEQALAHPYLEQYYDPSDEPIAEA 329
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 11 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR-- 67
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 68 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 124
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 125 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 181
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 242 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 301
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 302 IEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 9 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR-- 65
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 66 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 122
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 123 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 179
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 180 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 240 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 299
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 300 IEVEQALAHPYLEQYYDPSDEPIAEA 325
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 15 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR-- 71
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 72 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 128
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 185
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 186 GFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 305
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 306 IEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 16 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR-- 72
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 73 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 129
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 130 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 186
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 187 GFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 247 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 306
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 307 IEVEQALAHPYLEQYYDPSDEPIAEA 332
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 31 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR-- 87
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 88 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 144
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 145 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 201
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 202 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 262 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 321
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 322 IEVEQALAHPYLEQYYDPSDEPIAEA 347
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 9 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR-- 65
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 66 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 122
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 123 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 179
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL 282
+ V + +Y APE++ + Y K IDIWS G IL +LS P F + + IL
Sbjct: 180 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
Query: 283 -------QGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 240 GILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 299
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 300 IEVEQALAHPYLEQYYDPSDEPIAEA 325
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 137/299 (45%), Gaps = 42/299 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQI 120
P+ + Y + + +G G ++ + A K + K +T D++ +E+Q
Sbjct: 4 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEIQA 61
Query: 121 MQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFD---RIIAKGHYS-----ERAAAS 172
M PNIV + ++ + +VM+L + G + D I+AKG + E A+
Sbjct: 62 MSQCH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 120
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG------KV 226
+ R+++ + H G +HRD+K N L E+ +++ DFG S F G KV
Sbjct: 121 ILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKV 177
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
+ VG+ ++APEV+ R Y + DIWS G+ L +G P+ + LQ
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN 237
Query: 285 NIDFDSAPWPTISSGAKD-------------LVRRMLTQDPKKRITAAEVLEHPWLKES 330
+ P++ +G +D ++ L +DP+KR TAAE+L H + +++
Sbjct: 238 DP-------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 16 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR-- 72
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 73 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 129
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 130 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 186
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 187 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 247 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 306
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 307 IEVEQALAHPYLEQYYDPSDEPIAEA 332
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 17 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR-- 73
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 74 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 130
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 131 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 187
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 188 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 247
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 248 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 307
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 308 IEVEQALAHPYLEQYYDPSDEPIAEA 333
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 8 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR-- 64
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 65 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 121
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 122 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 178
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 179 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 238
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 239 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 298
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 299 IEVEQALAHPYLEQYYDPSDEPIAEA 324
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 15 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR-- 71
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 72 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 128
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 185
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 305
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 306 IEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 148/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 13 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR-- 69
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 70 TLREIKILLAFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 126
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 183
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 184 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 244 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 303
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L + SD+PI A
Sbjct: 304 IEVEQALAHPYLAQYYDPSDEPIAEA 329
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 137/281 (48%), Gaps = 20/281 (7%)
Query: 69 YTMGKELGRGQYGIIYLCIENST-GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
Y MG LG G YG + +++ T R+ K+ ++K+E+Q+++ L +
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 128 PNIVEFKGAY--EDMRFVHIVMELCADG--ELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
N+++ E+ + +++VME C G E+ D + K + A F ++ +
Sbjct: 67 -NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLIDGLEY 124
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS---FFFEEGKVYRDIVGSAYYVAPE 240
H++G+VH+D+KP N L T+ +K++ G + F R GS + PE
Sbjct: 125 LHSQGIVHKDIKPGNLLLTTG---GTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 241 V---LRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTIS 297
+ L G ++DIWSAGV LY + +G+ PF + +F+ I +G+ P +S
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS 241
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPI 338
DL++ ML +P KR + ++ +H W ++ ++ P+
Sbjct: 242 ----DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPV 278
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 15 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR-- 71
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 72 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKCQHLSND 128
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 185
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 305
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 306 IEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 147/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A K ++ + + R
Sbjct: 31 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR-- 87
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V++V L +L+ +++ H S
Sbjct: 88 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYLVTHLMG-ADLY-KLLKTQHLSND 144
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 145 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHT 201
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 202 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 262 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 321
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 322 IEVEQALAHPYLEQYYDPSDEPIAEA 347
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P+ + G+ + DV YT +G G YG++ +N + A + ++ + + R
Sbjct: 15 PEMVRGQVF-DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQR-- 71
Query: 114 IKREVQIM-----QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSER 168
RE++I+ +++ G +I+ E M+ V+IV +L + +L+ +++ H S
Sbjct: 72 TLREIKILLRFRHENIIGINDIIR-APTIEQMKDVYIVQDL-METDLY-KLLKTQHLSND 128
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF----FEEG 224
I+ + H+ V+HRDLKP N L + + +K+ DFG + +
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHT 185
Query: 225 KVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------K 275
+ V + +Y APE++ + Y K IDIWS G IL +LS P F +
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
Query: 276 GIFDAILQGNIDF----------------DSAPW----PTISSGAKDLVRRMLTQDPKKR 315
GI + Q +++ + PW P S A DL+ +MLT +P KR
Sbjct: 246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 305
Query: 316 ITAAEVLEHPWLKESGKASDKPIDTA 341
I + L HP+L++ SD+PI A
Sbjct: 306 IEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 9/247 (3%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G +G + L T +A K + K ++ D + E +++ P + +
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 135 GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDL 194
++ M ++ VME G+L I G + E A +I + +KG+++RDL
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 468
Query: 195 KPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDI 252
K +N + D +K+ DFG +G + G+ Y+APE++ + YGK +D
Sbjct: 469 KLDNVML---DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDW 525
Query: 253 WSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDP 312
W+ GV+LY +L+G PF E E +F +I++ N+ + ++S A + + ++T+ P
Sbjct: 526 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHP 581
Query: 313 KKRITAA 319
KR+
Sbjct: 582 GKRLGCG 588
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 9/247 (3%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G +G + L T +A K + K ++ D + E +++ P + +
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 135 GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDL 194
++ M ++ VME G+L I G + E A +I + +KG+++RDL
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 147
Query: 195 KPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDIVGSAYYVAPEVLRRR-YGKEIDI 252
K +N + D +K+ DFG +G + G+ Y+APE++ + YGK +D
Sbjct: 148 KLDNVML---DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDW 204
Query: 253 WSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDP 312
W+ GV+LY +L+G PF E E +F +I++ N+ + ++S A + + ++T+ P
Sbjct: 205 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHP 260
Query: 313 KKRITAA 319
KR+
Sbjct: 261 GKRLGCG 267
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 132/267 (49%), Gaps = 16/267 (5%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + K LG+G +G ++L T + FA K++ K ++ D + E +++ P
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
+ ++ + VME G+L I + + A +I+ + H+KG
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 139
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV----YRDIVGSAYYVAPEVLR- 243
+V+RDLK +N L D++ +K+ DFG +E + + G+ Y+APE+L
Sbjct: 140 IVYRDLKLDNILL---DKDGHIKIADFGMC---KENMLGDAKTNEFCGTPDYIAPEILLG 193
Query: 244 RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
++Y +D WS GV+LY +L G PF + E+ +F +I N + W + AKDL
Sbjct: 194 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W--LEKEAKDL 249
Query: 304 VRRMLTQDPKKRI-TAAEVLEHPWLKE 329
+ ++ ++P+KR+ ++ +HP +E
Sbjct: 250 LVKLFVREPEKRLGVRGDIRQHPLFRE 276
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 136/276 (49%), Gaps = 17/276 (6%)
Query: 63 EDVK-SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
EDV H+ + + +G+G +G + + +N T + +A K + K+K V + + ++ +E+QIM
Sbjct: 10 EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIM 69
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVV 181
Q L P +V +++D + +V++L G+L + H+ E +++ +
Sbjct: 70 QGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMAL 128
Query: 182 NVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEV 241
+ + ++HRD+KP+N L DE+ + +TDF + + G+ Y+APE+
Sbjct: 129 DYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEM 185
Query: 242 LRRR----YGKEIDIWSAGVILYILLSGVPPFW---AETEKGIFDAILQGNIDFDSAPWP 294
R Y +D WS GV Y LL G P+ + + K I + + SA W
Sbjct: 186 FSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSA-W- 243
Query: 295 TISSGAKDLVRRMLTQDPKKRITA-AEVLEHPWLKE 329
S L++++L +P +R + ++V P++ +
Sbjct: 244 --SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 131/267 (49%), Gaps = 16/267 (5%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + K LG+G +G ++L T + FA K++ K ++ D + E +++ P
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
+ ++ + VME G+L I + + A +I+ + H+KG
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 138
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV----YRDIVGSAYYVAPEVLR- 243
+V+RDLK +N L D++ +K+ DFG +E + G+ Y+APE+L
Sbjct: 139 IVYRDLKLDNILL---DKDGHIKIADFGMC---KENMLGDAKTNXFCGTPDYIAPEILLG 192
Query: 244 RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
++Y +D WS GV+LY +L G PF + E+ +F +I N + W + AKDL
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W--LEKEAKDL 248
Query: 304 VRRMLTQDPKKRI-TAAEVLEHPWLKE 329
+ ++ ++P+KR+ ++ +HP +E
Sbjct: 249 LVKLFVREPEKRLGVRGDIRQHPLFRE 275
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 134/285 (47%), Gaps = 20/285 (7%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ GK E ++S Y +G LG G G +Y I S A K V K ++ +
Sbjct: 36 HATKLAPGKEKEPLESQYQVGPLLGSGGSGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL 95
Query: 112 DD---IKREVQIMQHLS-GQPNIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYS 166
+ + EV +++ +S G ++ +E FV I+ +LFD I +G
Sbjct: 96 PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ 155
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
E A S F ++ V CH GV+HRD+K EN L N +K+ DFG ++ V
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TV 212
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
Y D G+ Y PE +R R +G+ +WS G++LY ++ G PF + E I++G
Sbjct: 213 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG 266
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ F +SS + L+R L P R T E+ HPW+++
Sbjct: 267 QVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 134/323 (41%), Gaps = 43/323 (13%)
Query: 41 EAQFSGPEPLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSV 100
EAQ GP + ++ P Y +LG G YG +Y I+ T A K +
Sbjct: 13 EAQTQGPGSM-----SVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI 67
Query: 101 AKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRII 160
I REV +++ L + NI+E K +H++ E A+ +L +
Sbjct: 68 RLEHEEEGVPGTAI-REVSLLKELQHR-NIIELKSVIHHNHRLHLIFEY-AENDLKKYMD 124
Query: 161 AKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSND--ENAIMKVTDFGFS 218
S R S +++ VN CH++ +HRDLKP+N L + +D E ++K+ DFG +
Sbjct: 125 KNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184
Query: 219 FFFEEGKVYRDI---VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET 273
F G R + + +Y PE+L R Y +DIWS I +L P F ++
Sbjct: 185 RAF--GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS 242
Query: 274 EKGIFDAILQGNIDFDSAPWPTISS-----------GAKDLVR---------------RM 307
E I + D WP +++ K L R M
Sbjct: 243 EIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAM 302
Query: 308 LTQDPKKRITAAEVLEHPWLKES 330
L DP KRI+A LEHP+ +
Sbjct: 303 LEMDPVKRISAKNALEHPYFSHN 325
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 137/273 (50%), Gaps = 12/273 (4%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
K+ + + LG+G +G + C +TG+ +ACK + K+++ + E QI++ +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMHVVN 182
+ + +V AYE + +V+ L G+L I G A +VF +I +
Sbjct: 242 NSR-FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 183 VCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL 242
H + +V+RDLKPEN L D++ ++++D G + EG+ + VG+ Y+APEV+
Sbjct: 301 DLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 243 R-RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
+ RY D W+ G +LY +++G PF +K + + + + S A+
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQAR 417
Query: 302 DLVRRMLTQDPKKRI-----TAAEVLEHPWLKE 329
L ++L +DP +R+ +A EV EHP K+
Sbjct: 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ M + LG G +G + I TG Q A K R+ +S +R+ E+QIM+ L+ P
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLN-HP 72
Query: 129 NIVEFKGAYEDMR------FVHIVMELCADGEL---FDRIIAKGHYSERAAASVFRDIMH 179
N+V + + ++ + ME C G+L ++ E ++ DI
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ H ++HRDLKPEN + + I K+ D G++ ++G++ + VG+ Y+AP
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 240 EVL-RRRYGKEIDIWSAGVILYILLSGVPPF 269
E+L +++Y +D WS G + + ++G PF
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ M + LG G +G + I TG Q A K R+ +S +R+ E+QIM+ L+ P
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLN-HP 73
Query: 129 NIVEFKGAYEDMR------FVHIVMELCADGEL---FDRIIAKGHYSERAAASVFRDIMH 179
N+V + + ++ + ME C G+L ++ E ++ DI
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ H ++HRDLKPEN + + I K+ D G++ ++G++ + VG+ Y+AP
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 240 EVL-RRRYGKEIDIWSAGVILYILLSGVPPF 269
E+L +++Y +D WS G + + ++G PF
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 137/273 (50%), Gaps = 12/273 (4%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
K+ + + LG+G +G + C +TG+ +ACK + K+++ + E QI++ +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMHVVN 182
+ + +V AYE + +V+ L G+L I G A +VF +I +
Sbjct: 242 NSR-FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 183 VCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL 242
H + +V+RDLKPEN L D++ ++++D G + EG+ + VG+ Y+APEV+
Sbjct: 301 DLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 243 R-RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
+ RY D W+ G +LY +++G PF +K + + + + S A+
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQAR 417
Query: 302 DLVRRMLTQDPKKRI-----TAAEVLEHPWLKE 329
L ++L +DP +R+ +A EV EHP K+
Sbjct: 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 43/293 (14%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK----REVQIMQHLSGQPNI 130
+G G YG++ C TGR VA +K + D +K RE+++++ L + N+
Sbjct: 33 VGEGSYGMVMKCRNKDTGR-----IVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE-NL 86
Query: 131 VEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVV 190
V + + ++V E L D + + I++ + CH+ ++
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNII 146
Query: 191 HRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRDIVGSAYYVAPEVL--RRRYG 247
HRD+KPEN L + ++ ++K+ DFGF+ G+VY D V + +Y APE+L +YG
Sbjct: 147 HRDIKPENILVS---QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ--GNID------FDSAP------- 292
K +D+W+ G ++ + G P F +++ I+ GN+ F+ P
Sbjct: 204 KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL 263
Query: 293 ------------WPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKA 333
+P +S DL ++ L DP KR AE+L H + + G A
Sbjct: 264 PEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFA 316
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 138/352 (39%), Gaps = 83/352 (23%)
Query: 59 GKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREV 118
G+ V Y + K+LG+G YGI++ I+ TG A K + + TD RE+
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD-AFQNSTDAQRTFREI 59
Query: 119 QIMQHLSGQPNIVEFKGAY-----EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV 173
I+ LSG NIV D+ V ME + I+ H V
Sbjct: 60 MILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH-----KQYV 114
Query: 174 FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF------------ 221
++ V+ H+ G++HRD+KP N L + +KV DFG S F
Sbjct: 115 VYQLIKVIKYLHSGGLLHRDMKPSNILLNA---ECHVKVADFGLSRSFVNIRRVTNNIPL 171
Query: 222 ----------EEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPF 269
++ + D V + +Y APE+L +Y K ID+WS G IL +L G P F
Sbjct: 172 SINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231
Query: 270 WAETEKGIFDAILQGNIDFDS--------------------------------------- 290
+ + I+ G IDF S
Sbjct: 232 PGSSTMNQLERII-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKN 290
Query: 291 -----APWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKP 337
P + A DL+ ++L +P KRI+A + L+HP++ +++P
Sbjct: 291 LLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEP 342
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 24/277 (8%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + +GRG Y + L T R +A K V K + D D ++ E + + S P
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
+V ++ + V+E G+L + + E A +I +N H +G
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRDIVGSAYYVAPEVLR-RRY 246
+++RDLK +N L D +K+TD+G G G+ Y+APE+LR Y
Sbjct: 127 IIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 183
Query: 247 GKEIDIWSAGVILYILLSGVPPF---------WAETEKGIFDAILQGNIDFDSAPWPTIS 297
G +D W+ GV+++ +++G PF TE +F IL+ I ++S
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLS 239
Query: 298 SGAKDLVRRMLTQDPKKRITA------AEVLEHPWLK 328
A +++ L +DPK+R+ A++ HP+ +
Sbjct: 240 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 24/277 (8%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + +GRG Y + L T R +A K V K + D D ++ E + + S P
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
+V ++ + V+E G+L + + E A +I +N H +G
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRDIVGSAYYVAPEVLR-RRY 246
+++RDLK +N L D +K+TD+G G G+ Y+APE+LR Y
Sbjct: 142 IIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 198
Query: 247 GKEIDIWSAGVILYILLSGVPPF---------WAETEKGIFDAILQGNIDFDSAPWPTIS 297
G +D W+ GV+++ +++G PF TE +F IL+ I ++S
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SMS 254
Query: 298 SGAKDLVRRMLTQDPKKRITA------AEVLEHPWLK 328
A +++ L +DPK+R+ A++ HP+ +
Sbjct: 255 VKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFR 291
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 125/267 (46%), Gaps = 18/267 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G YGI+Y + S + A K + +R + E+ + +HL + NIV++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLKHK-NIVQYL 85
Query: 135 GAYEDMRFVHIVMELCADGELFDRIIAKGHY---SERAAASVFRDIMHVVNVCHTKGVVH 191
G++ + F+ I ME G L + +K +E+ + I+ + H +VH
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 192 RDLKPENFLFTSNDENAIMKVTDFGFSFFFEE-GKVYRDIVGSAYYVAPEVL---RRRYG 247
RD+K +N L N + ++K++DFG S G+ Y+APE++ R YG
Sbjct: 146 RDIKGDNVLI--NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 248 KEIDIWSAGVILYILLSGVPPFW--AETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
K DIWS G + + +G PPF+ E + +F G ++S+ AK +
Sbjct: 204 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVHPEIPESMSAEAKAFIL 260
Query: 306 RMLTQDPKKRITAAEVLEHPWLKESGK 332
+ DP KR A ++L +LK S K
Sbjct: 261 KCFEPDPDKRACANDLLVDEFLKVSSK 287
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 386
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 387 EVDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 473 EYNMGDDAT---IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
EYN D T IA KE S D+D DG I+ E +M+S
Sbjct: 264 EYNSRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 305
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 473 EYNMGDDAT---IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
EYN D T IA KE S D+D DG I+ E +M+S
Sbjct: 298 EYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 339
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 473 EYNMGDDAT---IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
EYN D T IA KE S D+D DG I+ E +M+S
Sbjct: 298 EYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 339
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 386
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 387 EVDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 473 EYNMGDDAT---IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
EYN D T IA KE S D+D DG I+ E +M+S
Sbjct: 264 EYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 305
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 421
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 422 EVDEMIREADIDGDGQVNYEEFVQMMTA 449
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 473 EYNMGDDAT---IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
EYN D T IA KE S D+D DG I+ E +M+S
Sbjct: 299 EYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 340
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 24/277 (8%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + +GRG Y + L T R +A K V K + D D ++ E + + S P
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
+V ++ + V+E G+L + + E A +I +N H +G
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRDIVGSAYYVAPEVLR-RRY 246
+++RDLK +N L D +K+TD+G G G+ Y+APE+LR Y
Sbjct: 131 IIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 187
Query: 247 GKEIDIWSAGVILYILLSGVPPF---------WAETEKGIFDAILQGNIDFDSAPWPTIS 297
G +D W+ GV+++ +++G PF TE +F IL+ I ++S
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLS 243
Query: 298 SGAKDLVRRMLTQDPKKRITA------AEVLEHPWLK 328
A +++ L +DPK+R+ A++ HP+ +
Sbjct: 244 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 473 EYNMGDDAT---IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
EYN D T IA KE S D+D DG I+ E +M+S
Sbjct: 298 EYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 339
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNG
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 325
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 326 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 383
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 384 EVDEMIREADIDGDGQVNYEEFVQMMTA 411
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 473 EYNMGDDAT---IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
EYN D T IA KE S D+D DG I+ E +M+S
Sbjct: 261 EYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 302
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 125/277 (45%), Gaps = 24/277 (8%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
+ + + +GRG Y + L T R +A + V K + D D ++ E + + S P
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG 188
+V ++ + V+E G+L + + E A +I +N H +G
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRDIVGSAYYVAPEVLR-RRY 246
+++RDLK +N L D +K+TD+G G G+ Y+APE+LR Y
Sbjct: 174 IIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY 230
Query: 247 GKEIDIWSAGVILYILLSGVPPF---------WAETEKGIFDAILQGNIDFDSAPWPTIS 297
G +D W+ GV+++ +++G PF TE +F IL+ I ++S
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLS 286
Query: 298 SGAKDLVRRMLTQDPKKRITA------AEVLEHPWLK 328
A +++ L +DPK+R+ A++ HP+ +
Sbjct: 287 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 147/334 (44%), Gaps = 62/334 (18%)
Query: 45 SGPEP----LPHSPDTILGKPYEDVKSH---------YTMGKELGRGQYGIIYLCIENST 91
SGP P + +T + Y D SH Y + ++LGRG+Y ++ I +
Sbjct: 2 SGPVPSRARVYTDVNTHRPREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITN 61
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFVHIVMEL 149
+ K ++ ++ IKRE++I+++L G PNI+ +D R +V E
Sbjct: 62 NEKVVVK------ILKPVKKNKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 115
Query: 150 CADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAI 209
+ + Y R +I+ ++ CH+ G++HRD+KP N + + E+
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMY---EILKALDYCHSMGIMHRDVKPHNVMI--DHEHRK 170
Query: 210 MKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVP 267
+++ D+G + F+ G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
Query: 268 PFWAETE--------------KGIFDAILQGNIDFD--------------------SAPW 293
PF+ + + ++D I + NI+ D S
Sbjct: 231 PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQ 290
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+S A D + ++L D + R+TA E +EHP+
Sbjct: 291 HLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 27/281 (9%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ 122
ED + YT+G G YG S G+ K + + ++ ++ + EV +++
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLR 60
Query: 123 HLSGQPNIVEFKGAYEDMR--FVHIVMELCADGELFDRIIAKG-----HYSERAAASVFR 175
L PNIV + D ++IVME C G+L +I KG + E V
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMT 118
Query: 176 DIMHVVNVCHTKG-----VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVY-RD 229
+ + CH + V+HRDLKP N +F +N +K+ DFG + + + ++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDEDFAKE 175
Query: 230 IVGSAYYVAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDF 288
VG+ YY++PE + R Y ++ DIWS G +LY L + +PPF A ++K + I +G F
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--F 233
Query: 289 DSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
P+ S +++ RML R + E+LE+P + E
Sbjct: 234 RRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 5/176 (2%)
Query: 338 IDTAVIFRMKQFRAMNKLKKLALKVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKA 397
ID V+ K + M + +KLA+ +I + ++QKLK F +D + G ++ +L+
Sbjct: 20 IDIHVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRK 79
Query: 398 GLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLYKAFQYFDKD 457
GL + G ML + + D DG+G IDY EF+ A + R +L + + +Y AF+ FD D
Sbjct: 80 GLERSGLMLP-PNFDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSK-KLIYCAFRVFDVD 137
Query: 458 NSGYITVDELETAFKEYNMGDDAT---IATIKEIMSEVDRDKDGRISYDEFRAMMK 510
N G IT EL N + T + +K+++ EVD++ DG+I + EF MMK
Sbjct: 138 NDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMK 193
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 146/294 (49%), Gaps = 22/294 (7%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D + +T +++G+G +G ++ I+N T + A K + + + + ++E+ ++
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI--QQEITVLSQ 76
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
P + ++ G+Y + I+ME G D ++ G E A++ R+I+ ++
Sbjct: 77 CDS-PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDY 134
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVL 242
H++ +HRD+K N L + + E +K+ DFG + + ++ R+ VG+ +++APEV+
Sbjct: 135 LHSEKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 191
Query: 243 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTI----S 297
++ Y + DIWS G+ L G PP + I + N PT+ S
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------PTLEGNYS 244
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRA 351
K+ V L ++P R TA E+L+H ++ + K + T +I R K+++A
Sbjct: 245 KPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTS--YLTELIDRYKRWKA 296
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 133/281 (47%), Gaps = 27/281 (9%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ 122
ED + YT+G G YG S G+ K + + ++ ++ + EV +++
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLR 60
Query: 123 HLSGQPNIVEFKGAYEDMR--FVHIVMELCADGELFDRIIAKG-----HYSERAAASVFR 175
L PNIV + D ++IVME C G+L +I KG + E V
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMT 118
Query: 176 DIMHVVNVCHTKG-----VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVY-RD 229
+ + CH + V+HRDLKP N +F +N +K+ DFG + + +
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDTSFAKT 175
Query: 230 IVGSAYYVAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDF 288
VG+ YY++PE + R Y ++ DIWS G +LY L + +PPF A ++K + I +G F
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--F 233
Query: 289 DSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
P+ S +++ RML R + E+LE+P + E
Sbjct: 234 RRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 146/294 (49%), Gaps = 22/294 (7%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D + +T +++G+G +G ++ I+N T + A K + + + + ++E+ ++
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI--QQEITVLSQ 61
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
P + ++ G+Y + I+ME G D ++ G E A++ R+I+ ++
Sbjct: 62 CDS-PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDY 119
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVL 242
H++ +HRD+K N L + + E +K+ DFG + + ++ R+ VG+ +++APEV+
Sbjct: 120 LHSEKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 176
Query: 243 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTI----S 297
++ Y + DIWS G+ L G PP + I + N PT+ S
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------PTLEGNYS 229
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRA 351
K+ V L ++P R TA E+L+H ++ + K + T +I R K+++A
Sbjct: 230 KPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTS--YLTELIDRYKRWKA 281
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 363 IVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDG 422
+ + L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDAT 481
NGTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM--TNLGEKLT 118
Query: 482 IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 126/258 (48%), Gaps = 16/258 (6%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSG 126
+++ + K++GRGQ+ +Y G A K V L+ R D +E+ +++ L+
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN- 90
Query: 127 QPNIVEFKGAYEDMRFVHIVMELCADGELFDRII-----AKGHYSERAAASVFRDIMHVV 181
PN++++ ++ + ++IV+EL G+L R+I K ER F + +
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 182 NVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRDIVGSAYYVAPE 240
H++ V+HRD+KP N T+ ++K+ D G FF + +VG+ YY++PE
Sbjct: 150 EHMHSRRVMHRDIKPANVFITA---TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
Query: 241 VLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPT--IS 297
+ Y + DIWS G +LY + + PF+ +K ++ + D P P+ S
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQCDYPPLPSDHYS 264
Query: 298 SGAKDLVRRMLTQDPKKR 315
+ LV + DP+KR
Sbjct: 265 EELRQLVNMCINPDPEKR 282
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 146/294 (49%), Gaps = 22/294 (7%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D + +T +++G+G +G ++ I+N T + A K + + + + ++E+ ++
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI--QQEITVLSQ 61
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
P + ++ G+Y + I+ME G D ++ G E A++ R+I+ ++
Sbjct: 62 CDS-PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDY 119
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVL 242
H++ +HRD+K N L + + E +K+ DFG + + ++ R+ VG+ +++APEV+
Sbjct: 120 LHSEKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 176
Query: 243 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTI----S 297
++ Y + DIWS G+ L G PP + I + N PT+ S
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------PTLEGNYS 229
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRA 351
K+ V L ++P R TA E+L+H ++ + K + T +I R K+++A
Sbjct: 230 KPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTS--YLTELIDRYKRWKA 281
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 133/281 (47%), Gaps = 27/281 (9%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ 122
ED + YT+G G YG S G+ K + + ++ ++ + EV +++
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLR 60
Query: 123 HLSGQPNIVEFKGAYEDMR--FVHIVMELCADGELFDRIIAKG-----HYSERAAASVFR 175
L PNIV + D ++IVME C G+L +I KG + E V
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMT 118
Query: 176 DIMHVVNVCHTKG-----VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVY-RD 229
+ + CH + V+HRDLKP N +F +N +K+ DFG + + +
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDTSFAKA 175
Query: 230 IVGSAYYVAPEVLRR-RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDF 288
VG+ YY++PE + R Y ++ DIWS G +LY L + +PPF A ++K + I +G F
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--F 233
Query: 289 DSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
P+ S +++ RML R + E+LE+P + E
Sbjct: 234 RRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ EF+T + K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 363 TIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 473 EYNMGDDAT---IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
EYN D T IA KE S D+D DG I+ E +M+S
Sbjct: 298 EYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 339
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHKLERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
GTID+ EF+T M R + E + +AF+ FDKD +G+I+ EL N+G+ T
Sbjct: 61 GTIDFPEFLTM-MARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMT--NLGEKLTDE 117
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM S
Sbjct: 118 EVDEMIREADIDGDGQVNYEEFVTMMTS 145
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG+G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 362 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 419
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 473 EYNMGDDAT---IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
EYN+ D T IA KE S D+D DG I+ E +M+S
Sbjct: 297 EYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 338
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG+G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 362 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 419
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 473 EYNMGDDAT---IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
EYN+ D T IA KE S D+D DG I+ E +M+S
Sbjct: 297 EYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 338
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG+G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 362
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 473 EYNMGDDAT---IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
EYN D T IA KE S D+D DG I+ E +M+S
Sbjct: 298 EYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 339
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG+G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 362 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 419
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 473 EYNMGDDAT---IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
EYN D T IA KE S D+D DG I+ E +M+S
Sbjct: 297 EYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 338
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
Query: 361 KVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADI 420
+ + L E+I + KE F+ D D +GT++ EL + LG TE++++ + D
Sbjct: 2 NAMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 61
Query: 421 DGNGTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDD 479
DGNGTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+
Sbjct: 62 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEK 119
Query: 480 ATIATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
T + E++ E D D DG+++Y+EF MM +
Sbjct: 120 LTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 151
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 363 IVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDG 422
+ + L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDAT 481
NGTID+ EF+T ++ K + E + +AF+ FDKD +G+I+ EL N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM--TNLGEKLT 118
Query: 482 IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM S
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVTMMTS 148
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 363 IVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDG 422
+ + L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDAT 481
NGTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 118
Query: 482 IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 363 IVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDG 422
+ + L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDAT 481
NGTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 118
Query: 482 IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 363 IVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDG 422
+ + L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 423 NGTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDAT 481
NGTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 119
Query: 482 IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 120 DEEVDEMIREADIDGDGQVNYEEFVQMMTA 149
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 363 IVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDG 422
+ + L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDAT 481
NGTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 118
Query: 482 IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 18/263 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G YGI+Y + S + A K + +R + E+ + +HL + NIV++
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLKHK-NIVQYL 71
Query: 135 GAYEDMRFVHIVMELCADGELFDRIIAKGHY---SERAAASVFRDIMHVVNVCHTKGVVH 191
G++ + F+ I ME G L + +K +E+ + I+ + H +VH
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 192 RDLKPENFLFTSNDENAIMKVTDFGFSFFFEE-GKVYRDIVGSAYYVAPEVL---RRRYG 247
RD+K +N L N + ++K++DFG S G+ Y+APE++ R YG
Sbjct: 132 RDIKGDNVLI--NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 189
Query: 248 KEIDIWSAGVILYILLSGVPPFW--AETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
K DIWS G + + +G PPF+ E + +F G ++S+ AK +
Sbjct: 190 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVHPEIPESMSAEAKAFIL 246
Query: 306 RMLTQDPKKRITAAEVLEHPWLK 328
+ DP KR A ++L +LK
Sbjct: 247 KCFEPDPDKRACANDLLVDEFLK 269
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEXLTD 119
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEXLTD 118
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF+T ++ K + E + +AF+ FDKD +G+I+ EL N+G+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM--TNLGEKLTD 118
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM S
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVTMMTS 147
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 363 IVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDG 422
+ + L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDAT 481
NGTID+ EF+T ++ K + E + +AF+ FDKD +G+I+ EL N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM--TNLGEKLT 118
Query: 482 IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM S
Sbjct: 119 DEEVDEMIRESDIDGDGQVNYEEFVTMMTS 148
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG+G
Sbjct: 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 353
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ EF+ ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 354 TIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 411
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 412 EVDEMIREADIDGDGQVNYEEFVQMMTA 439
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 118
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 124
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 125 EEVDEMIREADIDGDGQVNYEEFVQMMTA 153
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 118
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 427 DYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATI 485
D+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T +
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEV 119
Query: 486 KEIMSEVDRDKDGRISYDEFRAMMKS 511
E++ E D D DG+++Y+EF MM +
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMMTA 145
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNGTI
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 427 DYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATI 485
D+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T +
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEV 118
Query: 486 KEIMSEVDRDKDGRISYDEFRAMMKS 511
E++ E D D DG+++Y+EF MM +
Sbjct: 119 DEMIREADIDGDGQVNYEEFVQMMTA 144
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 137/277 (49%), Gaps = 20/277 (7%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D + +T +++G+G +G ++ I+N T + A K + + + + ++E+ ++
Sbjct: 24 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI--QQEITVLSQ 81
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
P + ++ G+Y + I+ME G D ++ G E A++ R+I+ ++
Sbjct: 82 CD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDY 139
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVL 242
H++ +HRD+K N L + + E +K+ DFG + + ++ R+ VG+ +++APEV+
Sbjct: 140 LHSEKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 196
Query: 243 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTI----S 297
++ Y + DIWS G+ L G PP + I + N PT+ S
Sbjct: 197 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------PTLEGNYS 249
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKAS 334
K+ V L ++P R TA E+L+H ++ + K +
Sbjct: 250 KPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKT 286
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 84/142 (59%), Gaps = 2/142 (1%)
Query: 370 EEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYI 429
E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNGTID+
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 430 EFITATMQRHKLERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIM 489
EF+T ++ K E + +AF+ FDKD +GYI+ EL N+G+ T + E++
Sbjct: 63 EFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMI 120
Query: 490 SEVDRDKDGRISYDEFRAMMKS 511
E + D DG+++Y+EF MM +
Sbjct: 121 REANIDGDGQVNYEEFVQMMTA 142
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 44/73 (60%)
Query: 360 LKVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAAD 419
L ++ + + ++++E F D D NG +S EL+ + LG LT+ ++ + ++ A+
Sbjct: 65 LTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAN 124
Query: 420 IDGNGTIDYIEFI 432
IDG+G ++Y EF+
Sbjct: 125 IDGDGQVNYEEFV 137
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 363 IVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDG 422
+ + L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDAT 481
NGTID+ EF+T ++ K + E + +AF+ FDKD +G+I+ EL N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT--NLGEKLT 118
Query: 482 IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVTMMTT 148
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 3/144 (2%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 427 DYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATI 485
D+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T +
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEV 119
Query: 486 KEIMSEVDRDKDGRISYDEFRAMM 509
E++ E D D DG+++Y+EF MM
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMM 143
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 363 IVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDG 422
+ + L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDAT 481
NGTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 118
Query: 482 IATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ +++ E D D DG+++Y+EF MM +
Sbjct: 119 DEEVDQMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNG
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 61 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 118
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMM 509
+ E++ E D D DG+++Y+EF MM
Sbjct: 119 EVDEMIREADIDGDGQVNYEEFVQMM 144
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF+T ++ K + E + +AF+ FDKD +G+I+ EL N+G+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM--TNLGEKLTD 118
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVTMMTA 147
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 127/258 (49%), Gaps = 22/258 (8%)
Query: 66 KSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLS 125
+ + + K +GRG +G + + + + FA K + K +++ + + + E ++ ++
Sbjct: 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL--VN 130
Query: 126 GQPN-IVEFKGAYEDMRFVHIVMELCADGELFDRIIA-KGHYSERAAASVFRDIMHVVNV 183
G I A++D +++VM+ G+L + + E A +++ ++
Sbjct: 131 GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDS 190
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDI-VGSAYYVAPEV 241
H VHRD+KP+N L D N +++ DFG E+G V + VG+ Y++PE+
Sbjct: 191 VHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEI 247
Query: 242 L------RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPT 295
L + RYG E D WS GV +Y +L G PF+AE+ + I+ F +PT
Sbjct: 248 LQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---FPT 304
Query: 296 ----ISSGAKDLVRRMLT 309
+S AKDL+RR++
Sbjct: 305 QVTDVSENAKDLIRRLIC 322
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 85/143 (59%), Gaps = 3/143 (2%)
Query: 370 EEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYI 429
E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNGTID+
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 430 EFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEI 488
EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T + E+
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEM 122
Query: 489 MSEVDRDKDGRISYDEFRAMMKS 511
+ E D D DG+++Y+EF MM +
Sbjct: 123 IREADIDGDGQVNYEEFVQMMTA 145
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 369 TEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDY 428
T+ ++++E F D D NG +S EL+ + LG LT+ ++ + ++ ADIDG+G ++Y
Sbjct: 77 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 136
Query: 429 IEFI 432
EF+
Sbjct: 137 EEFV 140
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 85/143 (59%), Gaps = 3/143 (2%)
Query: 370 EEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYI 429
E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNGTID+
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 430 EFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEI 488
EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T + E+
Sbjct: 63 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEM 120
Query: 489 MSEVDRDKDGRISYDEFRAMMKS 511
+ E D D DG+++Y+EF MM +
Sbjct: 121 IREADIDGDGQVNYEEFVQMMTA 143
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 369 TEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDY 428
T+ ++++E F D D NG +S EL+ + LG LT+ ++ + ++ ADIDG+G ++Y
Sbjct: 75 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 134
Query: 429 IEFI 432
EF+
Sbjct: 135 EEFV 138
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 118
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E + D DG+++Y+EF MM +
Sbjct: 119 EEVDEMIREANIDGDGQVNYEEFVQMMTA 147
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 132/305 (43%), Gaps = 51/305 (16%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD------IK 115
++ + Y +++G G YG++Y ++S GR A K + + D +D
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKA-KDSQGRIVALKRI-------RLDAEDEGIPSTAI 67
Query: 116 REVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADG--ELFDRIIAKGHYSERAAASV 173
RE+ +++ L PNIV R + +V E ++ D K +
Sbjct: 68 REISLLKELH-HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIY 124
Query: 174 FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVG 232
++ V CH ++HRDLKP+N L S + +K+ DFG + F + Y V
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 233 SAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE----KGIFDAILQGNI 286
+ +Y AP+VL ++Y +DIWS G I +++G P F T+ IF + N
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNP 241
Query: 287 D------------------FDSAPWPTISSG----AKDLVRRMLTQDPKKRITAAEVLEH 324
F+ PW +I G DL+ ML DP KRI+A + + H
Sbjct: 242 REWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301
Query: 325 PWLKE 329
P+ K+
Sbjct: 302 PYFKD 306
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 132/305 (43%), Gaps = 51/305 (16%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD------IK 115
++ + Y +++G G YG++Y ++S GR A K + + D +D
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKA-KDSQGRIVALKRI-------RLDAEDEGIPSTAI 67
Query: 116 REVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADG--ELFDRIIAKGHYSERAAASV 173
RE+ +++ L PNIV R + +V E ++ D K +
Sbjct: 68 REISLLKELH-HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIY 124
Query: 174 FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVG 232
++ V CH ++HRDLKP+N L S + +K+ DFG + F + Y V
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 233 SAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE----KGIFDAILQGNI 286
+ +Y AP+VL ++Y +DIWS G I +++G P F T+ IF + N
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNP 241
Query: 287 D------------------FDSAPWPTISSG----AKDLVRRMLTQDPKKRITAAEVLEH 324
F+ PW +I G DL+ ML DP KRI+A + + H
Sbjct: 242 REWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301
Query: 325 PWLKE 329
P+ K+
Sbjct: 302 PYFKD 306
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E+ Q+++E F DTD +GT+ ELK + LG + +IK+ + D DG+GTI
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 427 DYIEFIT-ATMQRHKLERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATI 485
D+ EF+T T + + + E + KAF+ FD DNSG IT+ +L KE +G++ T +
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKE--LGENLTEEEL 139
Query: 486 KEIMSEVDRDKDGRISYDEFRAMMK 510
+E+++E DR+ D I DEF +MK
Sbjct: 140 QEMIAEADRNDDNEIDEDEFIRIMK 164
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 118
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG+++Y+EF MM +
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 16/183 (8%)
Query: 340 TAVIFRMKQFRAMNKLKKLALKVIVENLPT-EEIQKLKEKFTEMDTDNNGTLSYDELKAG 398
T + MK+F++ KL + A+ + L T EE ++L + F ++D + +G L EL G
Sbjct: 6 TGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEG 65
Query: 399 LAKL-----------GSMLTESDIKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHL 447
KL S E+++ +Q+ D D NG I+Y EF+T M + L E L
Sbjct: 66 YRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERL 125
Query: 448 YKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISYDEFRA 507
AFQ FD D SG IT +EL F + D+ T +++ E D++ DG + ++EF
Sbjct: 126 LAAFQQFDSDGSGKITNEELGRLFGVTEVDDE----TWHQVLQECDKNNDGEVDFEEFVE 181
Query: 508 MMK 510
MM+
Sbjct: 182 MMQ 184
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 15/192 (7%)
Query: 328 KESGKASDKPIDTAVIFRMKQFRAMNKLKKLALKVIVENLPT-EEIQKLKEKFTEMDTDN 386
KESG + P I M++F+ KL + AL + L + EE ++L + F +D +
Sbjct: 19 KESG--IELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNG 76
Query: 387 NGTLSYDELKAGLAKLGSM--------LTESDIKQYMQAADIDGNGTIDYIEFITATMQR 438
+G L EL G +KL ES++ + AAD D NG IDY EF+T M R
Sbjct: 77 DGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDR 136
Query: 439 HKLERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDG 498
L + L AFQ FD+D +G I+VDEL + F D T KE++S +D + DG
Sbjct: 137 KSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL----DHLESKTWKEMISGIDSNNDG 192
Query: 499 RISYDEFRAMMK 510
+ ++EF M++
Sbjct: 193 DVDFEEFCKMIQ 204
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 93/172 (54%), Gaps = 5/172 (2%)
Query: 342 VIFRMKQFRAMNKLKKLALKVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAK 401
V+ K + + K +KLA+ +I + +++KLK F +D D G ++ ++LK GL K
Sbjct: 21 VLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK 80
Query: 402 LGSMLTESDIKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLYKAFQYFDKDNSGY 461
G L + + D DG+G IDY EFI A + R +L + + +Y AF+ FD DN G
Sbjct: 81 DGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSK-KLIYCAFRVFDVDNDGE 138
Query: 462 ITVDELETAFKEYNMGDDAT---IATIKEIMSEVDRDKDGRISYDEFRAMMK 510
IT EL N + T + +K ++ +VD++ DG+I + EF MMK
Sbjct: 139 ITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 84/149 (56%), Gaps = 3/149 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
E L E+I + KE F D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF++ ++ K + E L +AF+ FD+D +G I+ EL N+G+ T
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVM--TNLGEKLTD 118
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG I+Y+EF MM S
Sbjct: 119 DEVDEMIREADIDGDGHINYEEFVRMMVS 147
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 139/320 (43%), Gaps = 52/320 (16%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVA------------KRKLVSKTDR 111
D+ S Y K LG G G+++ ++N ++ A K + + K++ + D
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDH 67
Query: 112 DDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
D+I + +I+ Q + + G+ ++ V+IV E ++ +G E A
Sbjct: 68 DNIVKVFEILGPSGSQ--LTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEEHAR 123
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS-----FFFEEGKV 226
++ + H+ V+HRDLKP N N E+ ++K+ DFG + + +G +
Sbjct: 124 LFMYQLLRGLKYIHSANVLHRDLKPANLFI--NTEDLVLKIGDFGLARIMDPHYSHKGHL 181
Query: 227 YRDIVGSAYYVAPEVLR--RRYGKEIDIWSAGVILYILLSG------------------- 265
+V + +Y +P +L Y K ID+W+AG I +L+G
Sbjct: 182 SEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES 240
Query: 266 VPPFWAETEKGIFDAI---LQGNIDFDSAPW----PTISSGAKDLVRRMLTQDPKKRITA 318
+P E + + I ++ ++ P P IS A D + ++LT P R+TA
Sbjct: 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTA 300
Query: 319 AEVLEHPWLKESGKASDKPI 338
E L HP++ D+PI
Sbjct: 301 EEALSHPYMSIYSFPMDEPI 320
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 143/294 (48%), Gaps = 22/294 (7%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
D + +T +G+G +G +Y I+N T A K + + + + ++E+ ++
Sbjct: 16 DPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDI--QQEITVLSQ 73
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
P I + G+Y + I+ME G D ++ G E A++ R+I+ ++
Sbjct: 74 CDS-PYITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDY 131
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVL 242
H++ +HRD+K N L + E +K+ DFG + + ++ R+ VG+ +++APEV+
Sbjct: 132 LHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 188
Query: 243 RRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTI----S 297
++ Y + DIWS G+ L G PP + I + ++P PT+ S
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPK------NSP-PTLEGQHS 241
Query: 298 SGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMKQFRA 351
K+ V L +DP+ R TA E+L+H ++ K + T +I R K++++
Sbjct: 242 KPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTS--FLTELIDRYKRWKS 293
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 135/321 (42%), Gaps = 47/321 (14%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
DV Y + + +G G YG++ TG+Q A K + V T+ RE++I++H
Sbjct: 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV-TNAKRTLRELKILKH 109
Query: 124 LSGQPNIVEFKG------AYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDI 177
NI+ K Y + + V++V++L + +L I + + +
Sbjct: 110 FKHD-NIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQL 167
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-----EEGKVYRDIVG 232
+ + H+ V+HRDLKP N L +EN +K+ DFG + E + V
Sbjct: 168 LRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 233 SAYYVAPEVL--RRRYGKEIDIWSAGVI---------------------LYILLSGVPPF 269
+ +Y APE++ Y + ID+WS G I L +++ G P
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284
Query: 270 WAETEKGI--FDAILQGNIDFDSAPWPTISSGAK----DLVRRMLTQDPKKRITAAEVLE 323
G A +Q PW T+ GA L+ RML +P RI+AA L
Sbjct: 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344
Query: 324 HPWLKESGKASDKPIDTAVIF 344
HP+L + D+P D A F
Sbjct: 345 HPFLAKYHDPDDEP-DCAPPF 364
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 135/311 (43%), Gaps = 55/311 (17%)
Query: 59 GKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREV 118
GK E + YT K +G G +G+++ + VA +K++ D+ RE+
Sbjct: 32 GKTGEQREIAYTNCKVIGNGSFGVVF------QAKLVESDEVAIKKVLQ--DKRFKNREL 83
Query: 119 QIMQHLSGQPNIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
QIM+ + PN+V+ K G +D F+++V+E E R A HY++
Sbjct: 84 QIMR-IVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP--ETVYR--ASRHYAKLKQTM 138
Query: 173 -------VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGK 225
++ + H+ G+ HRD+KP+N L + + ++K+ DFG + G+
Sbjct: 139 PMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL--DPPSGVLKLIDFGSAKILIAGE 196
Query: 226 VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ 283
+ S YY APE++ Y IDIWS G ++ L+ G P F E+ I++
Sbjct: 197 PNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIK 256
Query: 284 ------------GNIDFDSAPWPTI-------------SSGAKDLVRRMLTQDPKKRITA 318
N ++ +P I A DL+ R+L P R+TA
Sbjct: 257 VLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTA 316
Query: 319 AEVLEHPWLKE 329
E L HP+ E
Sbjct: 317 IEALCHPFFDE 327
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 135/321 (42%), Gaps = 47/321 (14%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
DV Y + + +G G YG++ TG+Q A K + V T+ RE++I++H
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV-TNAKRTLRELKILKH 110
Query: 124 LSGQPNIVEFKG------AYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDI 177
NI+ K Y + + V++V++L + +L I + + +
Sbjct: 111 FKHD-NIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQL 168
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-----EEGKVYRDIVG 232
+ + H+ V+HRDLKP N L +EN +K+ DFG + E + V
Sbjct: 169 LRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 233 SAYYVAPEVL--RRRYGKEIDIWSAGVI---------------------LYILLSGVPPF 269
+ +Y APE++ Y + ID+WS G I L +++ G P
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 285
Query: 270 WAETEKGI--FDAILQGNIDFDSAPWPTISSGAK----DLVRRMLTQDPKKRITAAEVLE 323
G A +Q PW T+ GA L+ RML +P RI+AA L
Sbjct: 286 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 345
Query: 324 HPWLKESGKASDKPIDTAVIF 344
HP+L + D+P D A F
Sbjct: 346 HPFLAKYHDPDDEP-DCAPPF 365
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 85/148 (57%), Gaps = 3/148 (2%)
Query: 363 IVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDG 422
+ + L ++I + KE F+ D D +G ++ EL + LG TE++++ + D DG
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDAT 481
NGTID+ EF+ ++ K + E L +AF+ FDKD +G+I+ EL N+G+ T
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM--TNLGEKLT 118
Query: 482 IATIKEIMSEVDRDKDGRISYDEFRAMM 509
+ E++ E D D DG+I+YDEF +M
Sbjct: 119 DEEVDEMIREADVDGDGQINYDEFVKVM 146
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 369 TEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDY 428
T+ ++LKE F D D NG +S EL+ + LG LT+ ++ + ++ AD+DG+G I+Y
Sbjct: 80 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 139
Query: 429 IEFITATMQR 438
EF+ M +
Sbjct: 140 DEFVKVMMAK 149
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 3/144 (2%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGNGTI
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 427 DYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATI 485
D+ EF+ ++ K + E L +AF+ FDKD +G+I+ EL N+G+ T +
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVM--TNLGEKLTDEEV 118
Query: 486 KEIMSEVDRDKDGRISYDEFRAMM 509
E++ E D D DG+++Y+EF +M
Sbjct: 119 DEMIREADVDGDGQVNYEEFVQVM 142
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 369 TEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDY 428
T+ ++LKE F D D NG +S EL+ + LG LT+ ++ + ++ AD+DG+G ++Y
Sbjct: 76 TDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 135
Query: 429 IEFITATMQR 438
EF+ M +
Sbjct: 136 EEFVQVMMAK 145
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 3/147 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF+ ++ K + E L +AF+ FDKD +G+I+ EL N+G+ T
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVM--TNLGEKLTD 118
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMM 509
+ E++ E D D DG+++Y+EF +M
Sbjct: 119 EEVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 369 TEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDY 428
T+ ++LKE F D D NG +S EL+ + LG LT+ ++ + ++ AD+DG+G ++Y
Sbjct: 79 TDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 138
Query: 429 IEFITATMQR 438
EF+ M +
Sbjct: 139 EEFVQVMMAK 148
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 3/147 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF+ ++ K + E L +AF+ FDKD +G+I+ EL N+G+ T
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVM--TNLGEKLTD 118
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMM 509
+ E++ E D D DG+++Y+EF +M
Sbjct: 119 EEVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 369 TEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDY 428
T+ +KLKE F D D NG +S EL+ + LG LT+ ++ + ++ AD+DG+G ++Y
Sbjct: 79 TDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 138
Query: 429 IEFITATMQR 438
EF+ M +
Sbjct: 139 EEFVQVMMAK 148
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 3/149 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF++ ++ K + E L +AF+ FD+D +G I+ EL N+G+ T
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVM--TNLGEKLTD 118
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D D DG I+Y+EF MM S
Sbjct: 119 DEVDEMIREADIDGDGHINYEEFVRMMVS 147
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 14/271 (5%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P T L K + + + + K +GRG +G + + +T R +A K + K +++ + +
Sbjct: 61 PFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETAC 120
Query: 114 IKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIA-KGHYSERAAAS 172
+ E ++ + Q I A++D +++VM+ G+L + + E A
Sbjct: 121 FREERDVLVNGDCQW-ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF 179
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDI- 230
+++ ++ H VHRD+KP+N L D N +++ DFG ++G V +
Sbjct: 180 YIGEMVLAIDSIHQLHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVA 236
Query: 231 VGSAYYVAPEVLRR------RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
VG+ Y++PE+L+ +YG E D WS GV +Y +L G PF+AE+ + I+
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 285 NIDFDSAPWPT-ISSGAKDLVRRMLTQDPKK 314
F T +S AKDL++R++ ++
Sbjct: 297 EERFQFPSHVTDVSEEAKDLIQRLICSRERR 327
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 14/271 (5%)
Query: 54 PDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD 113
P T L K + + + + K +GRG +G + + +T R +A K + K +++ + +
Sbjct: 77 PFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETAC 136
Query: 114 IKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIA-KGHYSERAAAS 172
+ E ++ + Q I A++D +++VM+ G+L + + E A
Sbjct: 137 FREERDVLVNGDCQW-ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF 195
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-FFEEGKVYRDI- 230
+++ ++ H VHRD+KP+N L D N +++ DFG ++G V +
Sbjct: 196 YIGEMVLAIDSIHQLHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVA 252
Query: 231 VGSAYYVAPEVLRR------RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG 284
VG+ Y++PE+L+ +YG E D WS GV +Y +L G PF+AE+ + I+
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 312
Query: 285 NIDFDSAPWPT-ISSGAKDLVRRMLTQDPKK 314
F T +S AKDL++R++ ++
Sbjct: 313 EERFQFPSHVTDVSEEAKDLIQRLICSRERR 343
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 151/312 (48%), Gaps = 26/312 (8%)
Query: 50 LPHSPDTI----LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL 105
+ HSP + + D + +T + +G+G +G ++ I+N T + A K + +
Sbjct: 2 MAHSPVAVQVPGMQNNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA 61
Query: 106 VSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHY 165
+ + ++E+ ++ + ++ G+Y + I+ME G D ++ G +
Sbjct: 62 EDEIEDI--QQEITVLSQCDSS-YVTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGPF 117
Query: 166 SERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGK 225
E A++ ++I+ ++ H++ +HRD+K N L + E +K+ DFG + + +
Sbjct: 118 DEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQ 174
Query: 226 VYRD-IVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ 283
+ R+ VG+ +++APEV+++ Y + DIWS G+ L G PP + I +
Sbjct: 175 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK 234
Query: 284 GNIDFDSAPWPTI----SSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPID 339
N PT+ + K+ + L +DP R TA E+L+H ++ ++ K +
Sbjct: 235 NNP-------PTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTS--YL 285
Query: 340 TAVIFRMKQFRA 351
T +I R K+++A
Sbjct: 286 TELIDRFKRWKA 297
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 135/291 (46%), Gaps = 36/291 (12%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
+G G YG +Y TG+ A K + V+ + ++IK+E+ +++ S NI +
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHRNIATYY 87
Query: 135 GAY--------EDMRFVHIVMELCADGELFDRII-AKGH-YSERAAASVFRDIMHVVNVC 184
GA+ +D + +VME C G + D I KG+ E A + R+I+ ++
Sbjct: 88 GAFIKKNPPGMDDQLW--LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 185 HTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVLR 243
H V+HRD+K +N L T ENA +K+ DFG S + R+ +G+ Y++APEV+
Sbjct: 146 HQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 202
Query: 244 ------RRYGKEIDIWSAGVILYILLSGVPPFW-AETEKGIFDAILQGNIDFDSAPWPTI 296
Y + D+WS G+ + G PP + +F S W
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW--- 259
Query: 297 SSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMK 347
S + + L ++ +R ++++HP+++ D+P + V ++K
Sbjct: 260 SKKFQSFIESCLVKNHSQRPATEQLMKHPFIR------DQPNERQVRIQLK 304
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 65
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 66 VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKPEN L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 126 LHRDLKPENLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 67
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKPEN L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 128 LHRDLKPENLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 118/244 (48%), Gaps = 35/244 (14%)
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERA------- 169
E++++ PN++ + + RF++I +ELC + L D + +K E
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYN 134
Query: 170 AASVFRDIMHVVNVCHTKGVVHRDLKPENFL------FTSND----ENAIMKVTDFGFSF 219
S+ R I V H+ ++HRDLKP+N L FT++ EN + ++DFG
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 220 FFEEGKV-----YRDIVGSAYYVAPEVL----RRRYGKEIDIWSAGVILYILLS-GVPPF 269
+ G+ + G++ + APE+L +RR + IDI+S G + Y +LS G PF
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 270 WAETEKGIFDAILQGNIDFDSAPW---PTISSGAKDLVRRMLTQDPKKRITAAEVLEHP- 325
+ + I++G D ++ + A DL+ +M+ DP KR TA +VL HP
Sbjct: 255 GDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 312
Query: 326 -WLK 328
W K
Sbjct: 313 FWPK 316
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 3/143 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL LG TE++++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHV--XTNLGEKLTD 118
Query: 483 ATIKEIMSEVDRDKDGRISYDEF 505
+ E + E D D DG+++Y+EF
Sbjct: 119 EEVDEXIREADIDGDGQVNYEEF 141
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 369 TEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDY 428
T+ ++++E F D D NG +S EL+ LG LT+ ++ + ++ ADIDG+G ++Y
Sbjct: 79 TDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNY 138
Query: 429 IEFI 432
EF+
Sbjct: 139 EEFV 142
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 128/299 (42%), Gaps = 52/299 (17%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD------IKREVQIMQ 122
Y +++G G YG ++ T A K V + D DD RE+ +++
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREICLLK 56
Query: 123 HLSGQPNIVEFKGAYEDMRFVHIVMELCADGEL---FDRIIAKGHYSERAAASVFRDIMH 179
L + NIV + + +V E C D +L FD G S ++
Sbjct: 57 ELKHK-NIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDS--CNGDLDPEIVKSFLFQLLK 112
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVA 238
+ CH++ V+HRDLKP+N L N E +K+ DFG + F + Y V + +Y
Sbjct: 113 GLGFCHSRNVLHRDLKPQNLLINRNGE---LKLADFGLARAFGIPVRCYSAEVVTLWYRP 169
Query: 239 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-----KGIFDAI---------- 281
P+VL + Y ID+WSAG I L + P + + K IF +
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPS 229
Query: 282 LQGNIDFDSAPW-----------PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ D+ P P +++ +DL++ +L +P +RI+A E L+HP+ +
Sbjct: 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 118/244 (48%), Gaps = 35/244 (14%)
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERA------- 169
E++++ PN++ + + RF++I +ELC + L D + +K E
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYN 134
Query: 170 AASVFRDIMHVVNVCHTKGVVHRDLKPENFL------FTSND----ENAIMKVTDFGFSF 219
S+ R I V H+ ++HRDLKP+N L FT++ EN + ++DFG
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 220 FFEEGKV-----YRDIVGSAYYVAPEVL----RRRYGKEIDIWSAGVILYILLS-GVPPF 269
+ G+ + G++ + APE+L +RR + IDI+S G + Y +LS G PF
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 270 WAETEKGIFDAILQGNIDFDSAPW---PTISSGAKDLVRRMLTQDPKKRITAAEVLEHP- 325
+ + I++G D ++ + A DL+ +M+ DP KR TA +VL HP
Sbjct: 255 GDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 312
Query: 326 -WLK 328
W K
Sbjct: 313 FWPK 316
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 89.4 bits (220), Expect = 5e-18, Method: Composition-based stats.
Identities = 51/142 (35%), Positives = 81/142 (57%), Gaps = 3/142 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +GT++ EL LG TE++++ + D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNG 61
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TI++ EF+T + K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 62 TINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHV--XTNLGEKLTDE 119
Query: 484 TIKEIMSEVDRDKDGRISYDEF 505
+ E + E D D DG+++Y+EF
Sbjct: 120 EVDEXIREADIDGDGQVNYEEF 141
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 369 TEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDY 428
T+ ++++E F D D NG +S EL+ LG LT+ ++ + ++ ADIDG+G ++Y
Sbjct: 79 TDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNY 138
Query: 429 IEFI 432
EF+
Sbjct: 139 EEFV 142
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G +G +Y T A K + + S+ + +D E+ I+ PNIV+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKL 99
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKGVVH 191
A+ + I++E CA G + D ++ + +E V + + +N H ++H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 192 RDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVLR------R 244
RDLK N LFT + + +K+ DFG S RD +G+ Y++APEV+ R
Sbjct: 159 RDLKAGNILFTLDGD---IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 245 RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAP--WPTISSGAKD 302
Y + D+WS G+ L + PP + I + + P W SS KD
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKD 272
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPI 338
+++ L ++ R T +++L+HP++ S+KPI
Sbjct: 273 FLKKCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 85/148 (57%), Gaps = 3/148 (2%)
Query: 363 IVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDG 422
+ + L ++I + KE F+ D D +G ++ EL + LG TE++++ + D DG
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDAT 481
NGTID+ EF+ ++ K + E L +AF+ FDKD +G+I+ EL N+G+ T
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM--TNLGEKLT 118
Query: 482 IATIKEIMSEVDRDKDGRISYDEFRAMM 509
+ E++ E D D DG+I+Y+EF +M
Sbjct: 119 DEEVDEMIREADVDGDGQINYEEFVKVM 146
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 369 TEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDY 428
T+ ++LKE F D D NG +S EL+ + LG LT+ ++ + ++ AD+DG+G I+Y
Sbjct: 80 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 139
Query: 429 IEFITATMQR 438
EF+ M +
Sbjct: 140 EEFVKVMMAK 149
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G +G +Y T A K + + S+ + +D E+ I+ PNIV+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKL 99
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKGVVH 191
A+ + I++E CA G + D ++ + +E V + + +N H ++H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 192 RDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVLR------R 244
RDLK N LFT + + +K+ DFG S RD +G+ Y++APEV+ R
Sbjct: 159 RDLKAGNILFTLDGD---IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 245 RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAP--WPTISSGAKD 302
Y + D+WS G+ L + PP + I + + P W SS KD
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKD 272
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPI 338
+++ L ++ R T +++L+HP++ S+KPI
Sbjct: 273 FLKKCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G +G +Y T A K + + S+ + +D E+ I+ PNIV+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKL 99
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKGVVH 191
A+ + I++E CA G + D ++ + +E V + + +N H ++H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 192 RDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVLR------R 244
RDLK N LFT + + +K+ DFG S RD +G+ Y++APEV+ R
Sbjct: 159 RDLKAGNILFTLDGD---IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 245 RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAP--WPTISSGAKD 302
Y + D+WS G+ L + PP + I + + P W SS KD
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKD 272
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPI 338
+++ L ++ R T +++L+HP++ S+KPI
Sbjct: 273 FLKKCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 66
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKPEN L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 127 LHRDLKPENLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 65
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKPEN L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 126 LHRDLKPENLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 40/306 (13%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIK 115
LG P + ++ +++G G YG++Y TG A K + +L ++T+
Sbjct: 3 LGSP--EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAI 57
Query: 116 REVQIMQHLSGQPNIVEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVF 174
RE+ +++ L+ PNIV+ +++V E L D + F A S
Sbjct: 58 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGS 233
++ + CH+ V+HRDLKP+N L N E AI K+ DFG + F + Y V +
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYTHEVVT 173
Query: 234 AYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSA 291
+Y APE+L + Y +DIWS G I +++ F ++E I + D
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 233
Query: 292 PWPTISS-------------------------GAKDLVRRMLTQDPKKRITAAEVLEHPW 326
WP ++S + L+ +ML DP KRI+A L HP+
Sbjct: 234 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
Query: 327 LKESGK 332
++ K
Sbjct: 294 FQDVTK 299
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 22/265 (8%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G +G +Y TG A K + + S+ + +D E++I+ P IV+
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILA-TCDHPYIVKL 73
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKGVVH 191
GAY + I++E C G + D I+ + +E V R ++ +N H+K ++H
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 192 RDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVLRRR----- 245
RDLK N L T + +++ DFG S + RD +G+ Y++APEV+
Sbjct: 133 RDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 246 -YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAP--WPTISSGAKD 302
Y + DIWS G+ L + PP + I + + P W S +D
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW---SVEFRD 246
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWL 327
++ L ++P+ R +AA++LEHP++
Sbjct: 247 FLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 22/265 (8%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G +G +Y TG A K + + S+ + +D E++I+ P IV+
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILA-TCDHPYIVKL 81
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKGVVH 191
GAY + I++E C G + D I+ + +E V R ++ +N H+K ++H
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 192 RDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD-IVGSAYYVAPEVLRRR----- 245
RDLK N L T + +++ DFG S + RD +G+ Y++APEV+
Sbjct: 141 RDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 246 -YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAP--WPTISSGAKD 302
Y + DIWS G+ L + PP + I + + P W S +D
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW---SVEFRD 254
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWL 327
++ L ++P+ R +AA++LEHP++
Sbjct: 255 FLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 131/307 (42%), Gaps = 61/307 (19%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK----REVQIMQH 123
Y E+G G YG ++ + G +F VA +++ +T + + REV +++H
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRF----VALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 124 LSG--QPNIVEFKGAYEDMR----------FVHIVMELCADGELFDRIIAKGHYSERAAA 171
L PN+V R F H+ +L D++ G +E
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT---YLDKVPEPGVPTETIKD 124
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+F+ ++ ++ H+ VVHRDLKP+N L TS+ + +K+ DFG + + +V
Sbjct: 125 MMFQ-LLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVV 180
Query: 232 GSAYYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETE----KGIFDAI-LQGN 285
+ +Y APEV L+ Y +D+WS G I + P F ++ I D I L G
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
Query: 286 IDFDSAPWPT-----------------------ISSGAKDLVRRMLTQDPKKRITAAEVL 322
D WP I KDL+ + LT +P KRI+A L
Sbjct: 241 ED-----WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 323 EHPWLKE 329
HP+ ++
Sbjct: 296 SHPYFQD 302
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 64
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ ++ CH+ V
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRV 124
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 125 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 64
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKPEN L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 125 LHRDLKPENLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 67
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 128 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 82/143 (57%), Gaps = 3/143 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL LG TE++++ + D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GTID+ EF+T ++ K + E + +AF+ FDKD +GYI+ EL N+G+ T
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHV--XTNLGEKLTD 119
Query: 483 ATIKEIMSEVDRDKDGRISYDEF 505
+ + + E D D DG+++Y+EF
Sbjct: 120 EEVDQXIREADIDGDGQVNYEEF 142
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 369 TEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDY 428
T+ ++++E F D D NG +S EL+ LG LT+ ++ Q ++ ADIDG+G ++Y
Sbjct: 80 TDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNY 139
Query: 429 IEFI 432
EF+
Sbjct: 140 EEFV 143
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 64
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVL--RRRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 125 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 181
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 40/306 (13%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIK 115
LG P + ++ +++G G YG++Y TG A K + +L ++T+
Sbjct: 3 LGSP--EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAI 57
Query: 116 REVQIMQHLSGQPNIVEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVF 174
RE+ +++ L+ PNIV+ +++V E L D + F A S
Sbjct: 58 REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGS 233
++ + CH+ V+HRDLKP+N L N E AI K+ DFG + F + Y V +
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYTHEVVT 173
Query: 234 AYYVAPEVLR--RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSA 291
+Y APE+L + Y +DIWS G I +++ F ++E I + D
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 233
Query: 292 PWPTISS-------------------------GAKDLVRRMLTQDPKKRITAAEVLEHPW 326
WP ++S + L+ +ML DP KRI+A L HP+
Sbjct: 234 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
Query: 327 LKESGK 332
++ K
Sbjct: 294 FQDVTK 299
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 66
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 67 VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 127 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 48/303 (15%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK-REVQIM 121
+ +K+ K LG G G + F + VA ++++ D DI E++++
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVF------QGSFQGRPVAVKRML--IDFCDIALMEIKLL 62
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERA-------AASVF 174
PN++ + + RF++I +ELC + L D + +K E S+
Sbjct: 63 TESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLL 121
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFL------FTSND----ENAIMKVTDFGFSFFFEEG 224
R I V H+ ++HRDLKP+N L FT++ EN + ++DFG + G
Sbjct: 122 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 225 KV-----YRDIVGSAYYVAPEVL--------RRRYGKEIDIWSAGVILYILLS-GVPPFW 270
+ + G++ + APE+L +RR + IDI+S G + Y +LS G PF
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
Query: 271 AETEKGIFDAILQGNIDFDSAPW---PTISSGAKDLVRRMLTQDPKKRITAAEVLEHP-- 325
+ + I++G D ++ + A DL+ +M+ DP KR TA +VL HP
Sbjct: 242 DKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
Query: 326 WLK 328
W K
Sbjct: 300 WPK 302
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 48/303 (15%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK-REVQIM 121
+ +K+ K LG G G + F + VA ++++ D DI E++++
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVF------QGSFQGRPVAVKRML--IDFCDIALMEIKLL 62
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERA-------AASVF 174
PN++ + + RF++I +ELC + L D + +K E S+
Sbjct: 63 TESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLL 121
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFL------FTSND----ENAIMKVTDFGFSFFFEEG 224
R I V H+ ++HRDLKP+N L FT++ EN + ++DFG + G
Sbjct: 122 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 225 KV-----YRDIVGSAYYVAPEVL--------RRRYGKEIDIWSAGVILYILLS-GVPPFW 270
+ + G++ + APE+L +RR + IDI+S G + Y +LS G PF
Sbjct: 182 QXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
Query: 271 AETEKGIFDAILQGNIDFDSAPW---PTISSGAKDLVRRMLTQDPKKRITAAEVLEHP-- 325
+ + I++G D ++ + A DL+ +M+ DP KR TA +VL HP
Sbjct: 242 DKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
Query: 326 WLK 328
W K
Sbjct: 300 WPK 302
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 67
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 128 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 64
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 125 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 67
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 128 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 63
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 124 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 64
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 125 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 131/307 (42%), Gaps = 61/307 (19%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK----REVQIMQH 123
Y E+G G YG ++ + G +F VA +++ +T + + REV +++H
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRF----VALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 124 LSG--QPNIVEFKGAYEDMR----------FVHIVMELCADGELFDRIIAKGHYSERAAA 171
L PN+V R F H+ +L D++ G +E
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT---YLDKVPEPGVPTETIKD 124
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+F+ ++ ++ H+ VVHRDLKP+N L TS+ + +K+ DFG + + +V
Sbjct: 125 MMFQ-LLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVV 180
Query: 232 GSAYYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETE----KGIFDAI-LQGN 285
+ +Y APEV L+ Y +D+WS G I + P F ++ I D I L G
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
Query: 286 IDFDSAPWPT-----------------------ISSGAKDLVRRMLTQDPKKRITAAEVL 322
D WP I KDL+ + LT +P KRI+A L
Sbjct: 241 ED-----WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 323 EHPWLKE 329
HP+ ++
Sbjct: 296 SHPYFQD 302
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 66
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 127 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 68
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 129 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 185
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 245
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 246 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 63
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 124 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 64
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 125 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 63
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 124 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 64
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 125 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 65
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 126 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 68
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 129 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 185
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 245
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 246 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 64
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 125 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 67
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 128 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 66
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 127 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 65
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 126 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 182
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 65
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 126 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 63
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 124 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 130/306 (42%), Gaps = 61/306 (19%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK----REVQIMQH 123
Y E+G G YG ++ + G +F VA +++ +T + + REV +++H
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRF----VALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 124 LSG--QPNIVEFKGAYEDMR----------FVHIVMELCADGELFDRIIAKGHYSERAAA 171
L PN+V R F H+ +L D++ G +E
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT---YLDKVPEPGVPTETIKD 124
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+F+ ++ ++ H+ VVHRDLKP+N L TS+ + +K+ DFG + + +V
Sbjct: 125 MMFQ-LLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVV 180
Query: 232 GSAYYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETE----KGIFDAI-LQGN 285
+ +Y APEV L+ Y +D+WS G I + P F ++ I D I L G
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
Query: 286 IDFDSAPWPT-----------------------ISSGAKDLVRRMLTQDPKKRITAAEVL 322
D WP I KDL+ + LT +P KRI+A L
Sbjct: 241 ED-----WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 323 EHPWLK 328
HP+ +
Sbjct: 296 SHPYFQ 301
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 63
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E + D + F A S ++ + CH+ V
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 124 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 17/258 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
+E+G G +G +Y + A K ++ S DI +EV+ +Q L PN ++
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 118
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIMHVVNVCHTKGVVH 191
++G Y +VME C G D + + K E A+V + + H+ ++H
Sbjct: 119 YRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 177
Query: 192 RDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL----RRRYG 247
RD+K N L + E ++K+ DFG + + VG+ Y++APEV+ +Y
Sbjct: 178 RDVKAGNILLS---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYD 231
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG-NIDFDSAPWPTISSGAKDLVRR 306
++D+WS G+ L PP + I Q + S W S ++ V
Sbjct: 232 GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDS 288
Query: 307 MLTQDPKKRITAAEVLEH 324
L + P+ R T+ +L+H
Sbjct: 289 CLQKIPQDRPTSEVLLKH 306
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 124/298 (41%), Gaps = 43/298 (14%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK--REVQIMQHL 124
S Y E+G G YG +Y + +G A KSV I REV +++ L
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 125 SG--QPNIVEFKGAYEDMRF-----VHIVMELCADGEL---FDRIIAKGHYSERAAASVF 174
PN+V R V +V E D +L D+ G +E +
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAE-TIKDLM 126
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA 234
R + ++ H +VHRDLKPEN L TS +K+ DFG + + +V +
Sbjct: 127 RQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALTPVVVTL 183
Query: 235 YYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKG----IFDAI-LQGNIDF 288
+Y APEV L+ Y +D+WS G I + P F +E IFD I L D+
Sbjct: 184 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 243
Query: 289 ------------DSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
P P S SGA+ L+ MLT +P KRI+A L+H +L
Sbjct: 244 PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQ-LLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 127/288 (44%), Gaps = 38/288 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 64
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E L D + F A S ++ + CH+ V
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 125 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ L+ +ML DP KRI+A L HP+ ++
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 130/330 (39%), Gaps = 69/330 (20%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQI 120
P++ V Y + K +G+G +G + ++ + A K V K + + E++I
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE----EIRI 146
Query: 121 MQHLSGQP--NIVEFKGAYEDMRFV-HIVMELCADGELFDRIIAKGHYSERAAASVFR-- 175
++HL Q N + E+ F HI M +I K + + V +
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206
Query: 176 -DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA 234
I+ ++ H ++H DLKPEN L + I KV DFG S + E +VY I S
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGI-KVIDFGSSCY-EHQRVYTXI-QSR 263
Query: 235 YYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETE---------------KGIF 278
+Y APEV L RYG ID+WS G IL LL+G P E E + +
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLL 323
Query: 279 DA---------------------------ILQGNIDF--------DSAPWPTISSGAKD- 302
DA +L G +S W G D
Sbjct: 324 DASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDP 383
Query: 303 ----LVRRMLTQDPKKRITAAEVLEHPWLK 328
+++ L DP R+T + L HPWL+
Sbjct: 384 LFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 17/258 (6%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
+E+G G +G +Y + A K ++ S DI +EV+ +Q L PN ++
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 79
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIMHVVNVCHTKGVVH 191
++G Y +VME C G D + + K E A+V + + H+ ++H
Sbjct: 80 YRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 138
Query: 192 RDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL----RRRYG 247
RD+K N L + E ++K+ DFG + + VG+ Y++APEV+ +Y
Sbjct: 139 RDVKAGNILLS---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYD 192
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQG-NIDFDSAPWPTISSGAKDLVRR 306
++D+WS G+ L PP + I Q + S W S ++ V
Sbjct: 193 GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDS 249
Query: 307 MLTQDPKKRITAAEVLEH 324
L + P+ R T+ +L+H
Sbjct: 250 CLQKIPQDRPTSEVLLKH 267
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 56/77 (72%)
Query: 361 KVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADI 420
K + E L EEI LKE F +DTDN+GT+++DELK GL ++GS L ES+IK M AADI
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 421 DGNGTIDYIEFITATMQ 437
D +GTIDY EFI AT+
Sbjct: 71 DKSGTIDYGEFIAATVH 87
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 437 QRHKLERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDK 496
+R E L + F+ D DNSG IT DEL+ K +G + + IK++M D DK
Sbjct: 15 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK--RVGSELMESEIKDLMDAADIDK 72
Query: 497 DGRISYDEFRA 507
G I Y EF A
Sbjct: 73 SGTIDYGEFIA 83
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 128/293 (43%), Gaps = 42/293 (14%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK----REVQIMQHLSGQP 128
+++G G YG++Y TG + VA K+ T+ + + RE+ +++ L+ P
Sbjct: 9 EKIGEGTYGVVYKARNKLTG-----EVVALXKIRLDTETEGVPSTAIREISLLKELN-HP 62
Query: 129 NIVEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
NIV+ +++V E L D + F A S ++ + CH+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVLR--R 244
V+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L +
Sbjct: 123 RVLHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 245 RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS------ 298
Y +DIWS G I +++ F ++E I + D WP ++S
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 299 -------------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 128/293 (43%), Gaps = 42/293 (14%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK----REVQIMQHLSGQP 128
+++G G YG++Y TG + VA K+ T+ + + RE+ +++ L+ P
Sbjct: 8 EKIGEGTYGVVYKARNKLTG-----EVVALXKIRLDTETEGVPSTAIREISLLKELN-HP 61
Query: 129 NIVEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
NIV+ +++V E L D + F A S ++ + CH+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF-EEGKVYRDIVGSAYYVAPEVLR--R 244
V+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L +
Sbjct: 122 RVLHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 245 RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS------ 298
Y +DIWS G I +++ F ++E I + D WP ++S
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 299 -------------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 130/330 (39%), Gaps = 69/330 (20%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQI 120
P++ V Y + K +G+G +G + ++ + A K V K + + E++I
Sbjct: 91 PHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE----EIRI 146
Query: 121 MQHLSGQP--NIVEFKGAYEDMRFV-HIVMELCADGELFDRIIAKGHYSERAAASVFR-- 175
++HL Q N + E+ F HI M +I K + + V +
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206
Query: 176 -DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA 234
I+ ++ H ++H DLKPEN L + I KV DFG S + E +VY I S
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGI-KVIDFGSSCY-EHQRVYXXI-QSR 263
Query: 235 YYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETE---------------KGIF 278
+Y APEV L RYG ID+WS G IL LL+G P E E + +
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLL 323
Query: 279 DA---------------------------ILQGNIDF--------DSAPWPTISSGAKD- 302
DA +L G +S W G D
Sbjct: 324 DASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDP 383
Query: 303 ----LVRRMLTQDPKKRITAAEVLEHPWLK 328
+++ L DP R+T + L HPWL+
Sbjct: 384 LFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 3/144 (2%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E+I KE F D D +G ++ +EL + L TE +++ + D DGNGTI
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 427 DYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATI 485
++ EF++ ++ K + E L +AF+ FDKD +GYI+ EL N+G+ T +
Sbjct: 64 EFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVM--INLGEKLTDEEV 121
Query: 486 KEIMSEVDRDKDGRISYDEFRAMM 509
++++ E D D DG+++Y+EF MM
Sbjct: 122 EQMIKEADLDGDGQVNYEEFVKMM 145
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 373 QKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFI 432
++LKE F D D NG +S EL+ + LG LT+ +++Q ++ AD+DG+G ++Y EF+
Sbjct: 83 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 142
Query: 433 TATM 436
M
Sbjct: 143 KMMM 146
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 130/330 (39%), Gaps = 69/330 (20%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQI 120
P++ V Y + K +G+G +G + ++ + A K V K + + E++I
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE----EIRI 146
Query: 121 MQHLSGQP--NIVEFKGAYEDMRFV-HIVMELCADGELFDRIIAKGHYSERAAASVFR-- 175
++HL Q N + E+ F HI M +I K + + V +
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206
Query: 176 -DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA 234
I+ ++ H ++H DLKPEN L + I KV DFG S + E +VY I S
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGI-KVIDFGSSCY-EHQRVYTXI-QSR 263
Query: 235 YYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETE---------------KGIF 278
+Y APEV L RYG ID+WS G IL LL+G P E E + +
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLL 323
Query: 279 DA---------------------------ILQGNIDF--------DSAPWPTISSGAKD- 302
DA +L G +S W G D
Sbjct: 324 DASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDP 383
Query: 303 ----LVRRMLTQDPKKRITAAEVLEHPWLK 328
+++ L DP R+T + L HPWL+
Sbjct: 384 LFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 30/279 (10%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y++ K++G G ++ + N + +A K V + ++T D + E+ + L
Sbjct: 58 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 129 NIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
+ + YE +++++VME C + +L + K S +++++ V+ H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG--KVYRDI-VGSAYYVAPEVLR- 243
G+VH DLKP NFL + ++K+ DFG + + V +D VG+ Y+ PE ++
Sbjct: 175 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 244 ----RRYG-------KEIDIWSAGVILYILLSGVPPFWAETEK-GIFDAILQGN--IDFD 289
R G + D+WS G ILY + G PF + AI+ N I+F
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290
Query: 290 SAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 291 DIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 128/299 (42%), Gaps = 52/299 (17%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD------IKREVQIMQ 122
Y +++G G YG ++ T A K V + D DD RE+ +++
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREICLLK 56
Query: 123 HLSGQPNIVEFKGAYEDMRFVHIVMELCADGEL---FDRIIAKGHYSERAAASVFRDIMH 179
L + NIV + + +V E C D +L FD G S ++
Sbjct: 57 ELKHK-NIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDS--CNGDLDPEIVKSFLFQLLK 112
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVA 238
+ CH++ V+HRDLKP+N L N E +K+ +FG + F + Y V + +Y
Sbjct: 113 GLGFCHSRNVLHRDLKPQNLLINRNGE---LKLANFGLARAFGIPVRCYSAEVVTLWYRP 169
Query: 239 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-----KGIFDAI---------- 281
P+VL + Y ID+WSAG I L + P + + K IF +
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS 229
Query: 282 LQGNIDFDSAPW-----------PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+ D+ P P +++ +DL++ +L +P +RI+A E L+HP+ +
Sbjct: 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 30/279 (10%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y++ K++G G ++ + N + +A K V + ++T D + E+ + L
Sbjct: 58 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 129 NIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
+ + YE +++++VME C + +L + K S +++++ V+ H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG--KVYRDI-VGSAYYVAPEVLR- 243
G+VH DLKP NFL + ++K+ DFG + + V +D VG+ Y+ PE ++
Sbjct: 175 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 244 ----RRYG-------KEIDIWSAGVILYILLSGVPPFWAETEK-GIFDAILQGN--IDFD 289
R G + D+WS G ILY + G PF + AI+ N I+F
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290
Query: 290 SAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 291 DIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 30/279 (10%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y++ K++G G ++ + N + +A K V + ++T D + E+ + L
Sbjct: 58 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 129 NIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
+ + YE +++++VME C + +L + K S +++++ V+ H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG--KVYRDI-VGSAYYVAPEVLR- 243
G+VH DLKP NFL + ++K+ DFG + + V +D VG+ Y+ PE ++
Sbjct: 175 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230
Query: 244 ----RRYG-------KEIDIWSAGVILYILLSGVPPFWAETEK-GIFDAILQGN--IDFD 289
R G + D+WS G ILY + G PF + AI+ N I+F
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290
Query: 290 SAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 291 DIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 30/279 (10%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y++ K++G G ++ + N + +A K V + ++T D + E+ + L
Sbjct: 11 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 68
Query: 129 NIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
+ + YE +++++VME C + +L + K S +++++ V+ H
Sbjct: 69 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE--EGKVYRDI-VGSAYYVAPEVLR- 243
G+VH DLKP NFL + ++K+ DFG + + V +D VG+ Y+ PE ++
Sbjct: 128 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 244 ----RRYG-------KEIDIWSAGVILYILLSGVPPFWAETEK-GIFDAILQGN--IDFD 289
R G + D+WS G ILY + G PF + AI+ N I+F
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 243
Query: 290 SAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 244 DIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--RDDIKREVQIMQHLSGQPNI 130
+++G G YG++Y TG A K + +L ++T+ RE+ +++ L+ PNI
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKELN-HPNI 67
Query: 131 VEFKGAYEDMRFVHIVME-LCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGV 189
V+ +++V E + D + F A S ++ + CH+ V
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVLR--RRY 246
+HRDLKP+N L N E AI K+ DFG + F + Y V + +Y APE+L + Y
Sbjct: 128 LHRDLKPQNLLI--NTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 247 GKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISS-------- 298
+DIWS G I +++ F ++E I + D WP ++S
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 299 -----------------GAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+ L+ +ML DP KRI+A L HP+ ++ K
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 30/279 (10%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y++ K++G G ++ + N + +A K V + ++T D + E+ + L
Sbjct: 30 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 87
Query: 129 NIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
+ + YE +++++VME C + +L + K S +++++ V+ H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE--EGKVYRDI-VGSAYYVAPEVLR- 243
G+VH DLKP NFL + ++K+ DFG + + V +D VG+ Y+ PE ++
Sbjct: 147 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 244 ----RRYG-------KEIDIWSAGVILYILLSGVPPFWAETEK-GIFDAILQGN--IDFD 289
R G + D+WS G ILY + G PF + AI+ N I+F
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 262
Query: 290 SAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 263 DIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 30/279 (10%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y++ K++G G ++ + N + +A K V + ++T D + E+ + L
Sbjct: 30 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 87
Query: 129 NIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
+ + YE +++++VME C + +L + K S +++++ V+ H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE--EGKVYRDI-VGSAYYVAPEVLR- 243
G+VH DLKP NFL + ++K+ DFG + + V +D VG+ Y+ PE ++
Sbjct: 147 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKD 202
Query: 244 ----RRYG-------KEIDIWSAGVILYILLSGVPPFWAETEK-GIFDAILQGN--IDFD 289
R G + D+WS G ILY + G PF + AI+ N I+F
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 262
Query: 290 SAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 263 DIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 30/279 (10%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y++ K++G G ++ + N + +A K V + ++T D + E+ + L
Sbjct: 14 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 71
Query: 129 NIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
+ + YE +++++VME C + +L + K S +++++ V+ H
Sbjct: 72 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 130
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEE--GKVYRDI-VGSAYYVAPEVLR- 243
G+VH DLKP NFL + ++K+ DFG + + V +D VG+ Y+ PE ++
Sbjct: 131 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 244 ----RRYG-------KEIDIWSAGVILYILLSGVPPFWAETEK-GIFDAILQGN--IDFD 289
R G + D+WS G ILY + G PF + AI+ N I+F
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 246
Query: 290 SAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 247 DIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 129/307 (42%), Gaps = 71/307 (23%)
Query: 76 GRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLS--GQPNIVEF 133
G+G +G + L E STG A K V + D RE+QIMQ L+ PNIV+
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQ-------DPRFRNRELQIMQDLAVLHHPNIVQL 84
Query: 134 KGAY-----EDMR--FVHIVMELCADGELFDRIIAKGHYSERAAA----------SVFRD 176
+ + D R ++++VME D R + +Y + A + R
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVPDT--LHRC-CRNYYRRQVAPPPILIKVFLFQLIRS 141
Query: 177 I--MHV--VNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
I +H+ VNVCH RD+KP N L N+ + +K+ DFG + + +
Sbjct: 142 IGCLHLPSVNVCH------RDIKPHNVLV--NEADGTLKLCDFGSAKKLSPSEPNVAYIC 193
Query: 233 SAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ------- 283
S YY APE++ + Y +DIWS G I ++ G P F + G I++
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR 253
Query: 284 --------GNIDFD-----SAPWPTISSG--------AKDLVRRMLTQDPKKRITAAEVL 322
+ D D PW + S A DL+ +L P++R+ E L
Sbjct: 254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEAL 313
Query: 323 EHPWLKE 329
HP+ E
Sbjct: 314 CHPYFDE 320
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 107
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYS-RAKQTLPVIYVKLYM 162
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 163 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 216
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 217 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 276
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 277 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336
Query: 324 HPWLKE 329
H + E
Sbjct: 337 HSFFDE 342
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 107
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 162
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 163 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSY 216
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 217 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 276
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 277 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336
Query: 324 HPWLKE 329
H + E
Sbjct: 337 HSFFDE 342
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 152
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYS-RAKQTLPVIYVKLYM 207
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 208 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSY 261
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 262 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 321
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 322 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 381
Query: 324 HPWLKE 329
H + E
Sbjct: 382 HSFFDE 387
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 109
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYS-RAKQTLPVIYVKLYM 164
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 165 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSY 218
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 219 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 278
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 279 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 338
Query: 324 HPWLKE 329
H + E
Sbjct: 339 HSFFDE 344
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 125/313 (39%), Gaps = 68/313 (21%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK-REVQIMQHLS 125
S + ++LG G Y +Y + +TG A K V KL S+ RE+ +M+ L
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV---KLDSEEGTPSTAIREISLMKELK 61
Query: 126 GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFR---------- 175
+ NIV +H +L E D + K + R + R
Sbjct: 62 HE-NIVRLYDV------IHTENKLTLVFEFMDNDLKK-YMDSRTVGNTPRGLELNLVKYF 113
Query: 176 --DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVG 232
++ + CH ++HRDLKP+N L + +K+ DFG + F + V
Sbjct: 114 QWQLLQGLAFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVV 170
Query: 233 SAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWA----ETEKGIFDAILQGNI 286
+ +Y AP+VL R Y IDIWS G IL +++G P F E K IFD + N
Sbjct: 171 TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPN- 229
Query: 287 DFDSAPWPTISSGAK------------------------------DLVRRMLTQDPKKRI 316
+ WP+++ K D + +L +P R+
Sbjct: 230 ---ESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRL 286
Query: 317 TAAEVLEHPWLKE 329
+A + L HPW E
Sbjct: 287 SAKQALHHPWFAE 299
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 111
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYS-RAKQTLPVIYVKLYM 166
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 167 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSY 220
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 221 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 280
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 281 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 340
Query: 324 HPWLKE 329
H + E
Sbjct: 341 HSFFDE 346
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 137/308 (44%), Gaps = 53/308 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + G A K ++ R ++T RE+ +++ +
Sbjct: 22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQTHAKRAYRELVLLKCV 80
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 81 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLC-QVIHMELDHERMSYLLYQMLC 137
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 138 GIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFMMTPYVVTRYYRA 193
Query: 239 PEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ----GNIDFDSAPW 293
PEV L Y +DIWS G I+ L+ G F ++ +++ + +F +A
Sbjct: 194 PEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ 253
Query: 294 PTI----------------------------------SSGAKDLVRRMLTQDPKKRITAA 319
PT+ +S A+DL+ +ML DP KRI+
Sbjct: 254 PTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVD 313
Query: 320 EVLEHPWL 327
E L HP++
Sbjct: 314 EALRHPYI 321
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 101
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 156
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 157 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSY 210
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 211 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 270
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 271 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 330
Query: 324 HPWLKE 329
H + E
Sbjct: 331 HSFFDE 336
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 132/306 (43%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 73
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D+ ++++V++ E R+ HYS RA ++
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 128
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 129 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 324 HPWLKE 329
H + E
Sbjct: 303 HSFFDE 308
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 138/308 (44%), Gaps = 53/308 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + G A K ++ R ++T RE+ +++ +
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQTHAKRAYRELVLLKCV 78
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 79 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLC-QVIHMELDHERMSYLLYQMLC 135
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 136 GIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTASTNFMMTPYVVTRYYRA 191
Query: 239 PEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ----GNIDFDSAPW 293
PEV L Y + +DIWS G I+ L+ G F ++ +++ + +F +A
Sbjct: 192 PEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ 251
Query: 294 PTI----------------------------------SSGAKDLVRRMLTQDPKKRITAA 319
PT+ +S A+DL+ +ML DP KRI+
Sbjct: 252 PTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVD 311
Query: 320 EVLEHPWL 327
E L HP++
Sbjct: 312 EALRHPYI 319
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 30/279 (10%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y++ K++G G ++ + N + +A K V + ++T D + E+ + L
Sbjct: 10 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 67
Query: 129 NIVEFKGAYEDM-RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
+ + YE +++++VME C + +L + K S +++++ V+ H
Sbjct: 68 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 126
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEE--GKVYRDI-VGSAYYVAPEVLR- 243
G+VH DLKP NFL + ++K+ DFG + + V +D VG+ Y+ PE ++
Sbjct: 127 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 244 ----RRYG-------KEIDIWSAGVILYILLSGVPPFWAETEK-GIFDAILQGN--IDFD 289
R G + D+WS G ILY + G PF + AI+ N I+F
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 242
Query: 290 SAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
P +D+++ L +DPK+RI+ E+L HP+++
Sbjct: 243 DIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 128/298 (42%), Gaps = 46/298 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK--REVQIMQHL 124
S Y E+G G YG +Y + +G A KSV ++ + + I REV +++ L
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRL 60
Query: 125 SG--QPNIVEFKGAYEDMRF-----VHIVMELCADGEL---FDRIIAKGHYSERAAASVF 174
PN+V R V +V E D +L D+ G +E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAE-TIKDLM 118
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA 234
R + ++ H +VHRDLKPEN L TS +K+ DFG + + +V +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALAPVVVTL 175
Query: 235 YYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKG----IFDAI-LQGNIDF 288
+Y APEV L+ Y +D+WS G I + P F +E IFD I L D+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 289 ------------DSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
P P S SGA+ L+ MLT +P KRI+A L+H +L
Sbjct: 236 PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQ-LLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 78
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 133
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 134 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSY 187
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 188 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 247
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 248 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 307
Query: 324 HPWLKE 329
H + E
Sbjct: 308 HSFFDE 313
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 128/298 (42%), Gaps = 46/298 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK--REVQIMQHL 124
S Y E+G G YG +Y + +G A KSV ++ + + I REV +++ L
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRL 60
Query: 125 SG--QPNIVEFKGAYEDMRF-----VHIVMELCADGEL---FDRIIAKGHYSERAAASVF 174
PN+V R V +V E D +L D+ G +E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAE-TIKDLM 118
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA 234
R + ++ H +VHRDLKPEN L TS +K+ DFG + + +V +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALDPVVVTL 175
Query: 235 YYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKG----IFDAI-LQGNIDF 288
+Y APEV L+ Y +D+WS G I + P F +E IFD I L D+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 289 ------------DSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
P P S SGA+ L+ MLT +P KRI+A L+H +L
Sbjct: 236 PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQ-LLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 85
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 140
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 141 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 194
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 195 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 254
Query: 277 IFDAILQGNIDF--------DSAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 255 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 314
Query: 324 HPWLKE 329
H + E
Sbjct: 315 HSFFDE 320
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 92
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 147
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 148 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 201
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 202 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 261
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 262 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 321
Query: 324 HPWLKE 329
H + E
Sbjct: 322 HSFFDE 327
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 81
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 136
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 137 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 190
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 191 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 250
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 251 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 310
Query: 324 HPWLKE 329
H + E
Sbjct: 311 HSFFDE 316
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 86
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 141
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 142 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSY 195
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 196 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 255
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 256 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 315
Query: 324 HPWLKE 329
H + E
Sbjct: 316 HSFFDE 321
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 85
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 140
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 141 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 194
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 195 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 254
Query: 277 IFDAILQGNIDF--------DSAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 255 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 314
Query: 324 HPWLKE 329
H + E
Sbjct: 315 HSFFDE 320
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 128/298 (42%), Gaps = 46/298 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK--REVQIMQHL 124
S Y E+G G YG +Y + +G A KSV ++ + + I REV +++ L
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRL 60
Query: 125 SG--QPNIVEFKGAYEDMRF-----VHIVMELCADGEL---FDRIIAKGHYSERAAASVF 174
PN+V R V +V E D +L D+ G +E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAE-TIKDLM 118
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA 234
R + ++ H +VHRDLKPEN L TS +K+ DFG + + +V +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALFPVVVTL 175
Query: 235 YYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKG----IFDAI-LQGNIDF 288
+Y APEV L+ Y +D+WS G I + P F +E IFD I L D+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 289 ------------DSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
P P S SGA+ L+ MLT +P KRI+A L+H +L
Sbjct: 236 PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQ-LLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 138/307 (44%), Gaps = 51/307 (16%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVV 80
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ ++
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-SQVIQMELDHERMSYLLYQMLVG 138
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ ++ H+ G++HRDLKP N + S +A +K+ DFG + + V + YY AP
Sbjct: 139 IKHL-HSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 240 EV-LRRRYGKEIDIWSAGVILYILLSGVPPF--------WAE------TEKGIFDAILQG 284
EV L Y + +DIWS GVI+ ++ G F W + T F LQ
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 285 NID-----------------FDSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAE 320
+ F +P S S A+DL+ +ML D KRI+ E
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 321 VLEHPWL 327
L+HP++
Sbjct: 315 ALQHPYI 321
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 73
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 128
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 129 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 324 HPWLKE 329
H + E
Sbjct: 303 HSFFDE 308
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 74
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 129
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 130 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 183
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 184 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 243
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 244 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 303
Query: 324 HPWLKE 329
H + E
Sbjct: 304 HSFFDE 309
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 138/307 (44%), Gaps = 51/307 (16%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVV 80
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ ++
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-SQVIQMELDHERMSYLLYQMLVG 138
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ ++ H+ G++HRDLKP N + S +A +K+ DFG + + V + YY AP
Sbjct: 139 IKHL-HSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 240 EV-LRRRYGKEIDIWSAGVILYILLSGVPPF--------WAE------TEKGIFDAILQG 284
EV L Y + +DIWS GVI+ ++ G F W + T F LQ
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 285 NID-----------------FDSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAE 320
+ F +P S S A+DL+ +ML D KRI+ E
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 321 VLEHPWL 327
L+HP++
Sbjct: 315 ALQHPYI 321
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 77
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 132
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 133 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 186
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 187 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 246
Query: 277 IFDAILQGNIDF--------DSAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 247 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 306
Query: 324 HPWLKE 329
H + E
Sbjct: 307 HSFFDE 312
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 73
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 128
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 129 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 324 HPWLKE 329
H + E
Sbjct: 303 HSFFDE 308
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 85/145 (58%), Gaps = 3/145 (2%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E+ Q+++E F DTD +GT+ ELK + LG + +IK+ + D DG+GTI
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 427 DYIEFIT-ATMQRHKLERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATI 485
D+ EF+ T + + + E + KAF+ FD D +G I+ L+ KE +G++ T +
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKE--LGENMTDEEL 119
Query: 486 KEIMSEVDRDKDGRISYDEFRAMMK 510
+E++ E DRD DG ++ +EF +MK
Sbjct: 120 QEMIDEADRDGDGEVNEEEFFRIMK 144
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + D+ RE+QIM+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLD-HC 73
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 128
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 129 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 324 HPWLKE 329
H + E
Sbjct: 303 HSFFDE 308
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 26/273 (9%)
Query: 78 GQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAY 137
G +G +Y T A K + + S+ + +D E+ I+ PNIV+ A+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKLLDAF 76
Query: 138 EDMRFVHIVMELCADGELFDRIIAKGH--YSERAAASVFRDIMHVVNVCHTKGVVHRDLK 195
+ I++E CA G + D ++ + +E V + + +N H ++HRDLK
Sbjct: 77 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 135
Query: 196 PENFLFTSNDENAIMKVTDFGFSFFFEEGKVYR--DIVGSAYYVAPEVLR------RRYG 247
N LFT + + +K+ DFG S + R +G+ Y++APEV+ R Y
Sbjct: 136 AGNILFTLDGD---IKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 192
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAP--WPTISSGAKDLVR 305
+ D+WS G+ L + PP + I + + P W SS KD ++
Sbjct: 193 YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDFLK 249
Query: 306 RMLTQDPKKRITAAEVLEHPWLKESGKASDKPI 338
+ L ++ R T +++L+HP++ S+KPI
Sbjct: 250 KCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 279
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 109/226 (48%), Gaps = 18/226 (7%)
Query: 116 REVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERA--AASV 173
REVQ+++ PN++ + +D +F +I +ELCA + + ++ ++
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA--ATLQEYVEQKDFAHLGLEPITL 123
Query: 174 FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMK--VTDFGFSFFFEEGK----VY 227
+ + H+ +VHRDLKP N L + + + +K ++DFG G+
Sbjct: 124 LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 228 RDIVGSAYYVAPEVLRRRYGKE----IDIWSAGVILYILLS-GVPPFWAETEKGIFDAIL 282
+ G+ ++APE+L + +DI+SAG + Y ++S G PF ++ IL
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--NIL 241
Query: 283 QGNIDFDSA-PWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
G D P A++L+ +M+ DP+KR +A VL+HP+
Sbjct: 242 LGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+ L E+I + KE F+ D D +G ++ +L + LG TE++++ + DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNG 362
Query: 425 TIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
TID+ +F+T ++ K + E + +AF+ F KD +GYI+ +L N+G+ T
Sbjct: 363 TIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMT--NLGEKLTDE 420
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMMKS 511
+ E++ E D DG+++Y++F MM +
Sbjct: 421 EVDEMIREAGIDGDGQVNYEQFVQMMTA 448
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 9 LAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 68 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQ 124
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 179
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 240 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 293
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 294 TAAQALAHAYFAQYHDPDDEPV 315
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 130/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + K RE+QIM+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKLD-HC 73
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 128
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 129 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 324 HPWLKE 329
H + E
Sbjct: 303 HSFFDE 308
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 130/306 (42%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + K RE+QIM+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKLD-HC 73
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ E R+ HYS RA ++
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLYM 128
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 129 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 243 TREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 324 HPWLKE 329
H + E
Sbjct: 303 HSFFDE 308
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQF 129
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E++ +K+ DFG ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLCRHTDDEMT--GYVA 184
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 298
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 299 AAQALAHAYFAQYHDPDDEPV 319
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMA--GFV 183
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 297
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPV 319
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 78 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 134
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 189
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 250 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 303
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 304 TAAQALAHAYFAQYHDPDDEPV 325
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMA--GFV 183
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 244 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 297
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPV 319
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQ 128
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 183
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 297
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPV 319
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 132/322 (40%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQ 128
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + E +K+ DFG + ++ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLARHTDDEMT--GYV 183
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 297
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPV 319
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 33/275 (12%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G G+++ +G A K + + R+ I RE+Q++ H P IV F
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 69
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG----- 188
GA+ + I ME DG D+++ K A + I+ V++ KG
Sbjct: 70 YGAFYSDGEISICMEH-MDGGSLDQVLKK-------AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 189 ----VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR- 243
++HRD+KP N L S E +K+ DFG S + + VG+ Y++PE L+
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQG 177
Query: 244 RRYGKEIDIWSAGVILYILLSG---VPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGA 300
Y + DIWS G+ L + G +PP A+ + AI + + P P + SG
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGV 237
Query: 301 -----KDLVRRMLTQDPKKRITAAEVLEHPWLKES 330
+D V + L ++P +R +++ H ++K S
Sbjct: 238 FSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 272
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 135
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E++ +K+ DFG + ++ V
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLARHTDDEMT--GYVA 190
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 251 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 304
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 305 AAQALAHAYFAQYHDPDDEPV 325
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 68 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 124
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMA--GFV 179
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 240 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 293
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 294 TAAQALAHAYFAQYHDPDDEPV 315
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 131
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E++ +K+ DFG + ++ V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLARHTDDEMT--GYVA 186
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 300
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 301 AAQALAHAYFAQYHDPDDEPV 321
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 149
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 204
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 265 ELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 318
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 319 AAQALAHAYFAQYHDPDDEPV 339
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 129
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 184
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 298
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 299 AAQALAHAYFAQYHDPDDEPV 319
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 23 LNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 81
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 82 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 138
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 139 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 193
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 194 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 253
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 254 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 307
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 308 TAAQALAHAYFAQYHDPDDEPV 329
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 183
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 244 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 297
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPV 319
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 78 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 134
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 189
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 250 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 303
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 304 TAAQALAHAYFAQYHDPDDEPV 325
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 146/332 (43%), Gaps = 59/332 (17%)
Query: 60 KPYEDVKSH---------YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD 110
+ Y D +SH Y + ++LGRG+Y ++ I N T + + K K
Sbjct: 21 REYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAI-NITNNEKVVVKILKPVKKKKI- 78
Query: 111 RDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFVHIVMELCADGELFDRIIAKGHYSER 168
KRE++I+++L G PNI+ +D R +V E + + Y R
Sbjct: 79 ----KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR 134
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYR 228
+I+ ++ CH+ G++HRD+KP N + + E+ +++ D+G + F+ G+ Y
Sbjct: 135 F---YMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYN 189
Query: 229 DIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE------------ 274
V S Y+ PE+L + Y +D+WS G +L ++ PF+ +
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 275 --KGIFDAILQGNIDFD--------------------SAPWPTISSGAKDLVRRMLTQDP 312
+ ++D I + NI+ D S +S A D + ++L D
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 313 KKRITAAEVLEHPWLKESGKASDKPI-DTAVI 343
+ R+TA E +EHP+ K +P D AV+
Sbjct: 310 QSRLTAREAMEHPYFYPVVKEQSQPCADNAVL 341
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 129/285 (45%), Gaps = 52/285 (18%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSV--AKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
LGRG +G+++ +A K + R+L R+ + REV+ + L P IV
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELA----REKVMREVKALAKLE-HPGIVR 67
Query: 133 FKGAYEDMR------------FVHIVMELCADGELFDRIIAKGHYSER---AAASVFRDI 177
+ A+ + +++I M+LC L D + + ER +F I
Sbjct: 68 YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQI 127
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI------- 230
V H+KG++HRDLKP N FT +D ++KV DFG ++ + + +
Sbjct: 128 AEAVEFLHSKGLMHRDLKPSNIFFTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 231 ------VGSAYYVAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ 283
VG+ Y++PE + Y ++DI+S G+IL+ LL PF + E+ ++
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER------VR 235
Query: 284 GNIDFDSAPWPTISSGAKD----LVRRMLTQDPKKRITAAEVLEH 324
D + +P + + +V+ ML+ P +R A ++E+
Sbjct: 236 TLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 32 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 90
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 91 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 148
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 203
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 263
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 264 ELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 317
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 318 AAQALAHAYFAQYHDPDDEPV 338
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 136
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 191
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 305
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 306 AAQALAHAYFAQYHDPDDEPV 326
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 68 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 124
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 179
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 240 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 293
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 294 TAAQALAHAYFAQYHDPDDEPV 315
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 183
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 297
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPV 319
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 137/307 (44%), Gaps = 51/307 (16%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVV 80
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ ++
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-SQVIQMELDHERMSYLLYQMLVG 138
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ ++ H+ G++HRDLKP N + S +A +K+ DFG + + V + YY AP
Sbjct: 139 IKHL-HSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 240 EV-LRRRYGKEIDIWSAGVILYILLSGVPPF--------WAE------TEKGIFDAILQG 284
EV L Y + +DIWS G I+ ++ G F W + T F LQ
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 285 NID-----------------FDSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAE 320
+ F +P S S A+DL+ +ML D KRI+ E
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 321 VLEHPWL 327
L+HP++
Sbjct: 315 ALQHPYI 321
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 131
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 186
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 300
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 301 AAQALAHAYFAQYHDPDDEPV 321
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 129
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 184
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 298
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 299 AAQALAHAYFAQYHDPDDEPV 319
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 135
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 190
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 251 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 304
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 305 AAQALAHAYFAQYHDPDDEPV 325
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 129
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GXVA 184
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 298
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 299 AAQALAHAYFAQYHDPDDEPV 319
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 77 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 133
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 188
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 302
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 303 TAAQALAHAYFAQYHDPDDEPV 324
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 83
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 84 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 141
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 196
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 257 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 310
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 311 AAQALAHAYFAQYHDPDDEPV 331
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 83
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 84 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 141
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 196
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 257 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 310
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 311 AAQALAHAYFAQYHDPDDEPV 331
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 131
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 186
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 300
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 301 AAQALAHAYFAQYHDPDDEPV 321
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 183
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 297
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPV 319
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 24 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 82
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 83 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 140
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 195
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 255
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 256 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 309
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 310 AAQALAHAYFAQYHDPDDEPV 330
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 92 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 148
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDE--MXGXV 203
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 264 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 317
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 318 TAAQALAHAYFAQYHDPDDEPV 339
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 129
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 184
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 298
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 299 AAQALAHAYFAQYHDPDDEPV 319
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 44/293 (15%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSG--QPNIVE 132
LGRG +G ++ + TG Q A K V R ++ R ++M +G P IV
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV----------RLEVFRAEELMA-CAGLTSPRIVP 130
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
GA + +V+I MEL G L + +G E A + + H++ ++H
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHG 190
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV------GSAYYVAPE-VLRRR 245
D+K +N L +S+ +A + DFG + + + +D++ G+ ++APE VL R
Sbjct: 191 DVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 246 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPW----PTISSGAK 301
++D+WS+ ++ +L+G P W + F L I + P P+ +
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHP-WTQ----FFRGPLCLKIASEPPPVREIPPSCAPLTA 303
Query: 302 DLVRRMLTQDPKKRITAAEV-------------LEHPWLKESGKASDKPIDTA 341
++ L ++P R++AAE+ L+ PW E + P + A
Sbjct: 304 QAIQEGLRKEPIHRVSAAELGGKVNRALQQVGGLKSPWRGEYKEPRHPPPNQA 356
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 36 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 94
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 95 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 152
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 207
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 267
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 268 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 321
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 322 AAQALAHAYFAQYHDPDDEPV 342
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 36 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 94
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 95 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 152
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEM--XGYVA 207
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 267
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 268 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 321
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 322 AAQALAHAYFAQYHDPDDEPV 342
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 183
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 297
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPV 319
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 132/322 (40%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 18 LNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 77 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 133
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + E +K+ DFG + ++ V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLARHTDDEMT--GYV 188
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 302
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 303 TAAQALAHAYFAQYHDPDDEPV 324
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 32 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 90
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 91 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 148
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 203
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 263
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 264 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 317
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 318 AAQALAHAYFAQYHDPDDEPV 338
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 149
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 204
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 265 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 318
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 319 AAQALAHAYFAQYHDPDDEPV 339
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 183
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 297
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPV 319
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 129
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 184
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 298
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 299 AAQALAHAYFAQYHDPDDEPV 319
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 132/306 (43%), Gaps = 64/306 (20%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
YT K +G G +G++Y +G A K V + K RE+QIM+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKLD-HC 73
Query: 129 NIVEFK------GAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASV--------- 173
NIV + G +D ++++V++ ++ +A+ HYS RA ++
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDY-VPATVYR--VAR-HYS-RAKQTLPVIYVKLYM 128
Query: 174 ---FRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
FR + ++ H+ G+ HRD+KP+N L + + A++K+ DFG + G+
Sbjct: 129 YQLFRSLAYI----HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 231 VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET------------EKG 276
+ S YY APE++ Y ID+WSAG +L LL G P F ++
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 277 IFDAILQGNIDFD--------SAPW-----PTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ I + N ++ + PW P A L R+L P R+T E
Sbjct: 243 TREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 324 HPWLKE 329
H + E
Sbjct: 303 HSFFDE 308
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 74 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 130
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 185
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 246 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 299
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 300 TAAQALAHAYFAQYHDPDDEPV 321
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 10 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 68
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 69 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 126
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 181
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 241
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 242 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 295
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 296 AAQALAHAYFAQYHDPDDEPV 316
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 130/273 (47%), Gaps = 22/273 (8%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ- 127
+++ + +GRG +G +Y C + TG+ +A K + K+++ K + + +IM L
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 248
Query: 128 --PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCH 185
P IV A+ + +++L G+L + G +SE +I+ + H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 186 TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRR- 244
+ VV+RDLKP N L DE+ ++++D G + F + K + VG+ Y+APEVL++
Sbjct: 309 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 364
Query: 245 -RYGKEIDIWSAGVILYILLSGVPPFWAETEKG---IFDAILQGNIDFDSAPWPTISSGA 300
Y D +S G +L+ LL G PF K I L ++ + P + S
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS-- 422
Query: 301 KDLVRRMLTQDPKKRI-----TAAEVLEHPWLK 328
L+ +L +D +R+ A EV E P+ +
Sbjct: 423 --LLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 453
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 130/273 (47%), Gaps = 22/273 (8%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ- 127
+++ + +GRG +G +Y C + TG+ +A K + K+++ K + + +IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 128 --PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCH 185
P IV A+ + +++L G+L + G +SE +I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 186 TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRR- 244
+ VV+RDLKP N L DE+ ++++D G + F + K + VG+ Y+APEVL++
Sbjct: 310 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 245 -RYGKEIDIWSAGVILYILLSGVPPFWAETEKG---IFDAILQGNIDFDSAPWPTISSGA 300
Y D +S G +L+ LL G PF K I L ++ + P + S
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS-- 423
Query: 301 KDLVRRMLTQDPKKRI-----TAAEVLEHPWLK 328
L+ +L +D +R+ A EV E P+ +
Sbjct: 424 --LLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 131/321 (40%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 24 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 82
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 83 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 140
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + E +K+ DFG + ++ V
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLARHTDDEMT--GYVA 195
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 255
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 256 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 309
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 310 AAQALAHAYFAQYHDPDDEPV 330
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 136
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + +E Y V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTADEMTGY---V 190
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 304
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 305 TAAQALAHAYFAQYHDPDDEPV 326
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 77 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 133
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 188
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 302
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 303 TAAQALAHAYFAQYHDPDDEPV 324
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 12 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 70
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 71 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 127
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 128 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYV 182
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 183 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 242
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 243 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 296
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 297 TAAQALAHAYFAQYHDPDDEPV 318
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 366 NLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGT 425
NL E+I + KE F D DNNG++S EL + LG +E+++ M D+DGN
Sbjct: 4 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 63
Query: 426 IDYIEFITATMQRHKLERFEH-LYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIAT 484
I++ EF+ ++ K E L +AF+ FDK+ G I+ EL+ ++G+ T A
Sbjct: 64 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL--TSIGEKLTDAE 121
Query: 485 IKEIMSEVDRDKDGRISYDEFRAMM----KSGTHLRAVSSRSLA 524
+ +++ EV D G I+ +F A++ +GT +A+ ++ LA
Sbjct: 122 VDDMLREV-SDGSGEINIQQFAALLSKGSSTGTRRKALRNKILA 164
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 10 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 68
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 69 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 126
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 181
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 241
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 242 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 295
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 296 AAQALAHAYFAQYHDPDDEPV 316
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 125
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 180
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 241 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 294
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 295 AAQALAHAYFAQYHDPDDEPV 315
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 145/334 (43%), Gaps = 62/334 (18%)
Query: 45 SGPEP----LPHSPDTILGKPYEDVKSH---------YTMGKELGRGQYGIIYLCIENST 91
SGP P + +T + Y D +SH Y + ++LGRG+Y ++ I +
Sbjct: 2 SGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITN 61
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFVHIVMEL 149
+ A K + K RE++I+++L G PNI+ +D R +V E
Sbjct: 62 NEKVAVKILKPVKKKKIK------REIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 115
Query: 150 CADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAI 209
+ + Y R +I+ ++ CH+ G++HRD+KP N L + E+
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMY---EILKALDYCHSMGIMHRDVKPHNVLI--DHEHRK 170
Query: 210 MKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVP 267
+++ D+G + F+ G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
Query: 268 PFWAETE--------------KGIFDAILQGNIDFD--------------------SAPW 293
PF+ + + ++D I + NI+ D S
Sbjct: 231 PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQ 290
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+S A D + ++L D + R+TA E +EHP+
Sbjct: 291 HLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 11 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 69
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 70 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 127
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 128 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 182
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 242
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 243 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 296
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 297 AAQALAHAYFAQYHDPDDEPV 317
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 136
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + +E Y V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTADEMTGY---V 190
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 304
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 305 TAAQALAHAYFAQYHDPDDEPV 326
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 136/307 (44%), Gaps = 51/307 (16%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVV 80
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-SQVIQMELDHERMSYLLYQMLCG 138
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ ++ H+ G++HRDLKP N + S +A +K+ DFG + + V + YY AP
Sbjct: 139 IKHL-HSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 240 EV-LRRRYGKEIDIWSAGVILYILLSGVPPF--------WAE------TEKGIFDAILQG 284
EV L Y + +DIWS G I+ ++ G F W + T F LQ
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 285 NID-----------------FDSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAE 320
+ F +P S S A+DL+ +ML D KRI+ E
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 321 VLEHPWL 327
L+HP++
Sbjct: 315 ALQHPYI 321
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 130/273 (47%), Gaps = 22/273 (8%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ- 127
+++ + +GRG +G +Y C + TG+ +A K + K+++ K + + +IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 128 --PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCH 185
P IV A+ + +++L G+L + G +SE +I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 186 TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRR- 244
+ VV+RDLKP N L DE+ ++++D G + F + K + VG+ Y+APEVL++
Sbjct: 310 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 245 -RYGKEIDIWSAGVILYILLSGVPPFWAETEKG---IFDAILQGNIDFDSAPWPTISSGA 300
Y D +S G +L+ LL G PF K I L ++ + P + S
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS-- 423
Query: 301 KDLVRRMLTQDPKKRI-----TAAEVLEHPWLK 328
L+ +L +D +R+ A EV E P+ +
Sbjct: 424 --LLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 130/273 (47%), Gaps = 22/273 (8%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ- 127
+++ + +GRG +G +Y C + TG+ +A K + K+++ K + + +IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 128 --PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCH 185
P IV A+ + +++L G+L + G +SE +I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 186 TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRR- 244
+ VV+RDLKP N L DE+ ++++D G + F + K + VG+ Y+APEVL++
Sbjct: 310 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 245 -RYGKEIDIWSAGVILYILLSGVPPFWAETEKG---IFDAILQGNIDFDSAPWPTISSGA 300
Y D +S G +L+ LL G PF K I L ++ + P + S
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS-- 423
Query: 301 KDLVRRMLTQDPKKRI-----TAAEVLEHPWLK 328
L+ +L +D +R+ A EV E P+ +
Sbjct: 424 --LLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 136
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + +E Y V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTADEMTGY---V 190
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 304
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 305 TAAQALAHAYFAQYHDPDDEPV 326
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 132/322 (40%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 77 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 133
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + E +K+ DFG + ++ V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXE---LKILDFGLARHTDDEMT--GYV 188
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 302
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 303 TAAQALAHAYFAQYHDPDDEPV 324
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++K S RE
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSK-PFQSIIHAKRTYRE 83
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 84 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 141
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 196
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 257 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 310
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 311 AAQALAHAYFAQYHDPDDEPV 331
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 111/260 (42%), Gaps = 18/260 (6%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
+ Y + +LG G +YL + + A K++ + +REV L
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVC 184
S Q NIV E+ ++VME L + I + G S A + I+ +
Sbjct: 69 SHQ-NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 185 HTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD--IVGSAYYVAPEVL 242
H +VHRD+KP+N L D N +K+ DFG + E + + ++G+ Y +PE
Sbjct: 128 HDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 243 RRRYGKEI-DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPT------ 295
+ E DI+S G++LY +L G PPF ET I +Q DS P T
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQ-----DSVPNVTTDVRKD 239
Query: 296 ISSGAKDLVRRMLTQDPKKR 315
I +++ R +D R
Sbjct: 240 IPQSLSNVILRATEKDKANR 259
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 51/289 (17%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G +G + R +A K + ++ I EV ++ L+ Q + +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 135 GAYEDMRFVH------------IVMELCADGELFDRIIAKGHYSER-AAASVFRDIMHVV 181
E FV I ME C +G L+D I ++ +R +FR I+ +
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 182 NVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI----------- 230
+ H++G++HRDLKP N DE+ +K+ DFG + V+R +
Sbjct: 130 SYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLA-----KNVHRSLDILKLDSQNLP 181
Query: 231 ---------VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK-GIF 278
+G+A YVA EVL Y ++ID++S G+I + + + PF E+ I
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNIL 238
Query: 279 DAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+ +I+F K ++R ++ DP KR A +L WL
Sbjct: 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 136/307 (44%), Gaps = 51/307 (16%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 80
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANL-SQVIQMELDHERMSYLLYQMLCG 138
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ ++ H+ G++HRDLKP N + S +A +K+ DFG + + V + YY AP
Sbjct: 139 IKHL-HSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 240 EV-LRRRYGKEIDIWSAGVILYILLSGVPPF--------WAE------TEKGIFDAILQG 284
EV L Y + +DIWS G I+ ++ G F W + T F LQ
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 285 NID-----------------FDSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAE 320
+ F +P S S A+DL+ +ML D KRI+ E
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 321 VLEHPWL 327
L+HP++
Sbjct: 315 ALQHPYI 321
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 137/305 (44%), Gaps = 49/305 (16%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD--------------RDDI 114
Y + + L +G++ I LC + +A K K L K D DD
Sbjct: 33 YRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGEL--FDR--IIAKGHYSE--- 167
K E+QI+ + + + +G + V+I+ E + + FD + +Y+
Sbjct: 91 KNELQIITDIKNEY-CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 168 -RAAASVFRDIMHVVNVCHT-KGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGK 225
+ + + +++ + H K + HRD+KP N L D+N +K++DFG S + + K
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYMVDKK 206
Query: 226 VYRDIVGSAYYVAPEVLRRR---YGKEIDIWSAGVILYILLSGVPPFWAETEK-GIFDAI 281
+ + G+ ++ PE G ++DIWS G+ LY++ V PF + +F+ I
Sbjct: 207 I-KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265
Query: 282 LQGNIDF----DSAPWPT-----------ISSGAKDLVRRMLTQDPKKRITAAEVLEHPW 326
NI++ + +P +S+ D ++ L ++P +RIT+ + L+H W
Sbjct: 266 RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW 325
Query: 327 LKESG 331
L ++
Sbjct: 326 LADTN 330
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 118
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 119 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLC-QVIQMELDHERMSYLLYQMLC 175
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 176 GIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 231
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 292 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 350
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 351 DDALQHPYI 359
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 133/330 (40%), Gaps = 76/330 (23%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTG-RQFACKSVAKRKLVSKTDR--DDIKREVQIM 121
+ + Y + LG G +G + CI++ G R A K +V DR + + E+Q++
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVK------IVKNVDRYCEAARSEIQVL 65
Query: 122 QHL-SGQPN----IVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERA--AASVF 174
+HL + PN V+ +E + IV EL +D I G R +
Sbjct: 66 EHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLST-YDFIKENGFLPFRLDHIRKMA 124
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDE----------------NAIMKVTDFGFS 218
I VN H+ + H DLKPEN LF +D N +KV DFG +
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 219 FFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWSAGVIL---YILLSGVPPFWAETE 274
+ +E + +V + +Y APEV L + + D+WS G IL Y+ + P ++
Sbjct: 185 TYDDEH--HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
Query: 275 KGIFDAIL-------------QGNIDFDSAPWPTISSGAK-------------------- 301
+ + IL + D W SS +
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEH 302
Query: 302 ----DLVRRMLTQDPKKRITAAEVLEHPWL 327
DL+++ML DP KRIT E L+HP+
Sbjct: 303 ERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 80/143 (55%), Gaps = 3/143 (2%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E++ + KE F+ D D +G ++ EL + LG TE++++ M D DGN
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
GT+D+ EF+ ++ K + E + +AF+ FDKD +G+++ EL +G+ +
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVM--TRLGEKLSD 118
Query: 483 ATIKEIMSEVDRDKDGRISYDEF 505
+ E++ D D DG+++Y+EF
Sbjct: 119 EEVDEMIRAADTDGDGQVNYEEF 141
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 42/64 (65%)
Query: 369 TEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDY 428
T+ ++++E F D D NG +S EL+ + +LG L++ ++ + ++AAD DG+G ++Y
Sbjct: 79 TDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNY 138
Query: 429 IEFI 432
EF+
Sbjct: 139 EEFV 142
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 118
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 119 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLC-QVIQMELDHERMSYLLYQMLC 175
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 176 GIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 231
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 292 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 350
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 351 DDALQHPYI 359
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 134/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ D+G + ++ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDYGLARHTDDEMT--GYV 183
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 297
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPV 319
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 37/274 (13%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G G+++ +G A K + + R+ I RE+Q++ H P IV F
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 88
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG----- 188
GA+ + I ME DG D+++ K A + I+ V++ KG
Sbjct: 89 YGAFYSDGEISICMEH-MDGGSLDQVLKK-------AGRIPEQILGKVSIAVIKGLTYLR 140
Query: 189 ----VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR- 243
++HRD+KP N L S E +K+ DFG S + + VG+ Y++PE L+
Sbjct: 141 EKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQG 196
Query: 244 RRYGKEIDIWSAGVILYILLSGVPPFWAET-EKGIFDAILQGNIDF-DSAPWPTISSGA- 300
Y + DIWS G+ L + G P + + IF+ +D+ + P P + SG
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFEL-----LDYIVNEPPPKLPSGVF 251
Query: 301 ----KDLVRRMLTQDPKKRITAAEVLEHPWLKES 330
+D V + L ++P +R +++ H ++K S
Sbjct: 252 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 285
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 138/313 (44%), Gaps = 63/313 (20%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 80
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLC-QVIQMELDHERMSYLLYQMLCG 138
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGF------SFFFEEGKVYRDIVGS 233
+ ++ H+ G++HRDLKP N + S + +K+ DFG SF E V R
Sbjct: 139 IKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVVTR----- 189
Query: 234 AYYVAPEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPF 269
YY APEV L Y + +DIWS G I+ IL G P F
Sbjct: 190 -YYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAF 248
Query: 270 WAETEKGIFDAI-------------LQGNIDF--DSAPWPTISSGAKDLVRRMLTQDPKK 314
+ + + + + L ++ F DS +S A+DL+ +ML D K
Sbjct: 249 MKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 315 RITAAEVLEHPWL 327
RI+ E L+HP++
Sbjct: 309 RISVDEALQHPYI 321
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 80
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 81 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLC-QVIQMELDHERMSYLLYQMLC 137
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 138 GIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 254 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 313 DDALQHPYI 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 81
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 82 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLC-QVIQMELDHERMSYLLYQMLC 138
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 139 GIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 194
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 254
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 255 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 313
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 314 DDALQHPYI 322
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 21 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 79
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 80 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLC-QVIQMELDHERMSYLLYQMLC 136
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 137 GIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 192
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 193 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 252
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 253 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 311
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 312 DDALQHPYI 320
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 81
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 82 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLC-QVIQMELDHERMSYLLYQMLC 138
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 139 GIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 194
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 254
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 255 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 313
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 314 DDALQHPYI 322
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 80
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 81 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLC-QVIQMELDHERMSYLLYQMLC 137
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 138 GIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 254 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 313 DDALQHPYI 321
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 74
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 75 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLC-QVIQMELDHERMSYLLYQMLC 131
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 132 GIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 187
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 247
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 248 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 306
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 307 DDALQHPYI 315
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 74
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 75 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLC-QVIQMELDHERMSYLLYQMLC 131
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 132 GIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 187
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 247
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 248 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 306
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 307 DDALQHPYI 315
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 147/340 (43%), Gaps = 62/340 (18%)
Query: 39 APEAQFSGPEP----LPHSPDTILGKPYEDVKSH---------YTMGKELGRGQYGIIYL 85
P SGP P + +T + Y D +SH Y + ++LGRG+Y ++
Sbjct: 1 GPLGSMSGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFE 60
Query: 86 CIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFV 143
I N T + + K K KRE++I+++L G PNI+ +D R
Sbjct: 61 AI-NITNNEKVVVKILKPVKKKKI-----KREIKILENLRGGPNIITLADIVKDPVSRTP 114
Query: 144 HIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTS 203
+V E + + Y R +I+ ++ CH+ G++HRD+KP N +
Sbjct: 115 ALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMGIMHRDVKPHNVMI-- 169
Query: 204 NDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYI 261
+ E+ +++ D+G + F+ G+ Y V S Y+ PE+L + Y +D+WS G +L
Sbjct: 170 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 229
Query: 262 LLSGVPPFWAETE--------------KGIFDAILQGNIDFD------------------ 289
++ PF+ + + ++D I + NI+ D
Sbjct: 230 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 289
Query: 290 --SAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
S +S A D + ++L D + R+TA E +EHP+
Sbjct: 290 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 135/307 (43%), Gaps = 51/307 (16%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 80
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANL-SQVIQMELDHERMSYLLYQMLCG 138
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY AP
Sbjct: 139 IKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 240 EV-LRRRYGKEIDIWSAGVILYILLSGVPPF--------WAE------TEKGIFDAILQG 284
EV L Y + +DIWS G I+ ++ G F W + T F LQ
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 285 NID-----------------FDSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAE 320
+ F +P S S A+DL+ +ML D KRI+ E
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 321 VLEHPWL 327
L+HP++
Sbjct: 315 ALQHPYI 321
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 73
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 74 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLC-QVIQMELDHERMSYLLYQMLC 130
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 131 GIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 186
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 246
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 247 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 306 DDALQHPYI 314
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 128/300 (42%), Gaps = 52/300 (17%)
Query: 64 DVKSH---YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD-RDDIKR--- 116
DVKS Y LG GQ+ +Y + +T + A K + KL +++ +D I R
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTAL 60
Query: 117 -EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELC-ADGELFDR----IIAKGHYSERAA 170
E++++Q LS PNI+ A+ + +V + D E+ + ++ H
Sbjct: 61 REIKLLQELS-HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYML 119
Query: 171 ASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRD 229
+ + + H ++HRDLKP N L DEN ++K+ DFG + F + Y
Sbjct: 120 MT-----LQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXH 171
Query: 230 IVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNID 287
V + +Y APE+L R YG +D+W+ G IL LL VP +++ I +
Sbjct: 172 QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGT 231
Query: 288 FDSAPWPTISSGAK------------------------DLVRRMLTQDPKKRITAAEVLE 323
WP + S DL++ + +P RITA + L+
Sbjct: 232 PTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 136/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXV 80
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ ++
Sbjct: 81 NHK-NIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-XQVIQMELDHERMSYLLYQ-ML 136
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 254 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 313 DDALQHPYI 321
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXV 80
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 81 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLC-QVIQMELDHERMSYLLYQMLC 137
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 138 GIKHL-HSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 254 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 313 DDALQHPYI 321
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 135/307 (43%), Gaps = 51/307 (16%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 80
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLC-QVIQMELDHERMSYLLYQMLCG 138
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY AP
Sbjct: 139 IKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 240 EV-LRRRYGKEIDIWSAGVILYILLSGVPPF--------WAE------TEKGIFDAILQG 284
EV L Y + +DIWS G I+ ++ G F W + T F LQ
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 285 NID-----------------FDSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAE 320
+ F +P S S A+DL+ +ML D KRI+ E
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 321 VLEHPWL 327
L+HP++
Sbjct: 315 ALQHPYI 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXV 80
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 81 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANL-XQVIQMELDHERMSYLLYQMLC 137
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 138 GIKHL-HSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 254 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 313 DDALQHPYI 321
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 130/314 (41%), Gaps = 42/314 (13%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + +G + A K ++ R S RE
Sbjct: 42 LNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS-RPFQSIIHAKRTYRE 100
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 101 LRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 158
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ DFG + ++ V
Sbjct: 159 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 213
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAIL-------- 282
+ +Y APE++ Y +DIWS G I+ LL+G F I+
Sbjct: 214 TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPA 273
Query: 283 ---------QGNIDFDSAP------WPTISSGAK----DLVRRMLTQDPKKRITAAEVLE 323
+ +S P + + GA DL+ +ML D KRITA+E L
Sbjct: 274 SVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALA 333
Query: 324 HPWLKESGKASDKP 337
HP+ + D+P
Sbjct: 334 HPYFSQYHDPDDEP 347
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 136/307 (44%), Gaps = 51/307 (16%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 81
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ +
Sbjct: 82 NHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLC-QVIQMELDHERMSYLLYQMLCG 139
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY AP
Sbjct: 140 IKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 240 EV-LRRRYGKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQG 284
EV L Y + +DIWS G I+ ++ G F W + + + F LQ
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 285 NID-----------------FDSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAE 320
+ F +P S S A+DL+ +ML D KRI+ E
Sbjct: 256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 315
Query: 321 VLEHPWL 327
L+HP++
Sbjct: 316 ALQHPYI 322
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 133/283 (46%), Gaps = 32/283 (11%)
Query: 66 KSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLS 125
+ + + K +GRG + + + TG+ +A K + K ++ + + + E ++ +
Sbjct: 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-G 118
Query: 126 GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFR----DIMHVV 181
+ I + A++D ++++VME G+L +++K + ER A + R +I+ +
Sbjct: 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLL-TLLSK--FGERIPAEMARFYLAEIVMAI 175
Query: 182 NVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV--GSAYYVAP 239
+ H G VHRD+KP+N L D +++ DFG R +V G+ Y++P
Sbjct: 176 DSVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSP 232
Query: 240 EVLR--------RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSA 291
E+L+ YG E D W+ GV Y + G PF+A++ + I+ +
Sbjct: 233 EILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK---EHL 289
Query: 292 PWPTISSG----AKDLVRRMLTQDPKKRI---TAAEVLEHPWL 327
P + G A+D ++R+L P+ R+ A + HP+
Sbjct: 290 SLPLVDEGVPEEARDFIQRLLCP-PETRLGRGGAGDFRTHPFF 331
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 136/307 (44%), Gaps = 51/307 (16%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 24 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 82
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ +
Sbjct: 83 NHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLC-QVIQMELDHERMSYLLYQMLCG 140
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY AP
Sbjct: 141 IKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMVPFVVTRYYRAP 196
Query: 240 EV-LRRRYGKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQG 284
EV L Y + +DIWS G I+ ++ G F W + + + F LQ
Sbjct: 197 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 256
Query: 285 NID-----------------FDSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAE 320
+ F +P S S A+DL+ +ML D KRI+ E
Sbjct: 257 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 316
Query: 321 VLEHPWL 327
L+HP++
Sbjct: 317 ALQHPYI 323
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 80
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 81 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANL-XQVIQMELDHERMSYLLYQMLX 137
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 138 GIKHL-HSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 254 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 313 DDALQHPYI 321
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 132/299 (44%), Gaps = 42/299 (14%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLS-----GQ 127
+ +G G YG + + ++ A K ++ R S RE+++++HL G
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
++ + ED V++V L G + I+ S+ + ++ + H+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRR--R 245
G++HRDLKP N + +E++ +++ DFG + +E V + +Y APE++
Sbjct: 151 GIIHRDLKPSN---VAVNEDSELRILDFGLARQADEEMT--GYVATRWYRAPEIMLNWMH 205
Query: 246 YGKEIDIWSAGVILYILLSGVPPF----WAETEKGIFDAI------LQGNIDFDSA---- 291
Y + +DIWS G I+ LL G F + + K I + + + I + A
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 265
Query: 292 ----PWP-----TISSGAK----DLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKP 337
P P +I GA DL+ RML D +R++AAE L H + + D+P
Sbjct: 266 QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 136/307 (44%), Gaps = 51/307 (16%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 80
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLC-QVIQMELDHERMSYLLYQMLCG 138
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY AP
Sbjct: 139 IKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 240 EV-LRRRYGKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQG 284
EV L Y + +DIWS G I+ ++ G F W + + + F LQ
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 285 NID-----------------FDSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAE 320
+ F +P S S A+DL+ +ML D KRI+ E
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 321 VLEHPWL 327
L+HP++
Sbjct: 315 ALQHPYI 321
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 79.7 bits (195), Expect = 4e-15, Method: Composition-based stats.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 4/146 (2%)
Query: 365 ENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNG 424
+NL E+I + KE F D DN+G++S EL + LG +E+++ M D+DGN
Sbjct: 3 QNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNH 62
Query: 425 TIDYIEFITATMQRHKLERFEH-LYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIA 483
I++ EF+ ++ K E L +AF+ FDK+ G I+ EL+ ++G+ T A
Sbjct: 63 AIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLT--SIGEKLTDA 120
Query: 484 TIKEIMSEVDRDKDGRISYDEFRAMM 509
+ E++ EV D G I+ +F A++
Sbjct: 121 EVDEMLREVS-DGSGEINIKQFAALL 145
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 62 YEDVKSHYTMGKELGRGQYGI----IYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
YE + +G+ +G GQ+G IY+ EN A + S + R+ +E
Sbjct: 7 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPA---LAVAIKTCKNCTSDSVREKFLQE 63
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFR-D 176
M+ P+IV+ G + V I+MELC GEL + + + + A+ ++
Sbjct: 64 ALTMRQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 121
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA-- 234
+ + +K VHRD+ N L +SND +K+ DFG S + E+ Y+ G
Sbjct: 122 LSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPI 178
Query: 235 YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGN-IDFDSA 291
++APE + RR+ D+W GV ++ IL+ GV PF + I G +
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 238
Query: 292 PWPTISSGAKDLVRRMLTQDPKKR 315
PT+ S L+ + DP +R
Sbjct: 239 CPPTLYS----LMTKCWAYDPSRR 258
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 62 YEDVKSHYTMGKELGRGQYGI----IYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
YE + +G+ +G GQ+G IY+ EN A + S + R+ +E
Sbjct: 8 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPA---LAVAIKTCKNCTSDSVREKFLQE 64
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFR-D 176
M+ P+IV+ G + V I+MELC GEL + + + + A+ ++
Sbjct: 65 ALTMRQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 122
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA-- 234
+ + +K VHRD+ N L +SND +K+ DFG S + E+ Y+ G
Sbjct: 123 LSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPI 179
Query: 235 YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGN-IDFDSA 291
++APE + RR+ D+W GV ++ IL+ GV PF + I G +
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 239
Query: 292 PWPTISSGAKDLVRRMLTQDPKKR 315
PT+ S L+ + DP +R
Sbjct: 240 CPPTLYS----LMTKCWAYDPSRR 259
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 62 YEDVKSHYTMGKELGRGQYGI----IYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
YE + +G+ +G GQ+G IY+ EN A + S + R+ +E
Sbjct: 10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPA---LAVAIKTCKNCTSDSVREKFLQE 66
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFR-D 176
M+ P+IV+ G + V I+MELC GEL + + + + A+ ++
Sbjct: 67 ALTMRQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 124
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA-- 234
+ + +K VHRD+ N L +SND +K+ DFG S + E+ Y+ G
Sbjct: 125 LSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPI 181
Query: 235 YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQG-NIDFDSA 291
++APE + RR+ D+W GV ++ IL+ GV PF + I G +
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 241
Query: 292 PWPTISSGAKDLVRRMLTQDPKKR 315
PT+ S L+ + DP +R
Sbjct: 242 CPPTLYS----LMTKCWAYDPSRR 261
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 132/330 (40%), Gaps = 76/330 (23%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTG-RQFACKSVAKRKLVSKTDR--DDIKREVQIM 121
+ + Y + LG G +G + CI++ G R A K +V DR + + E+Q++
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVK------IVKNVDRYCEAARSEIQVL 65
Query: 122 QHL-SGQPN----IVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERA--AASVF 174
+HL + PN V+ +E + IV EL +D I G R +
Sbjct: 66 EHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLST-YDFIKENGFLPFRLDHIRKMA 124
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDE----------------NAIMKVTDFGFS 218
I VN H+ + H DLKPEN LF +D N +KV DFG +
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 219 FFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWSAGVIL---YILLSGVPPFWAETE 274
+ +E + +V +Y APEV L + + D+WS G IL Y+ + P ++
Sbjct: 185 TYDDEH--HSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
Query: 275 KGIFDAIL-------------QGNIDFDSAPWPTISSGAK-------------------- 301
+ + IL + D W SS +
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEH 302
Query: 302 ----DLVRRMLTQDPKKRITAAEVLEHPWL 327
DL+++ML DP KRIT E L+HP+
Sbjct: 303 ERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 55/309 (17%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+ +
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 73
Query: 125 SGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+ + NI+ + E+ + V++VMEL D L ++I ER + +++ +
Sbjct: 74 NHK-NIISLLNVFTPQKTLEEFQDVYLVMEL-MDANL-XQVIQMELDHERMSYLLYQMLX 130
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY A
Sbjct: 131 GIKHL-HSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 186
Query: 239 PEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETE 274
PEV L Y + +DIWS G I+ IL G P F + +
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 246
Query: 275 KGIFDAILQGNIDFDSAPWPTI----------------SSGAKDLVRRMLTQDPKKRITA 318
+ + + + + +P + +S A+DL+ +ML DP KRI+
Sbjct: 247 PTVRNYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305
Query: 319 AEVLEHPWL 327
+ L+HP++
Sbjct: 306 DDALQHPYI 314
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 62 YEDVKSHYTMGKELGRGQYGI----IYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
YE + +G+ +G GQ+G IY+ EN A + S + R+ +E
Sbjct: 33 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPA---LAVAIKTCKNCTSDSVREKFLQE 89
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFR-D 176
M+ P+IV+ G + V I+MELC GEL + + + + A+ ++
Sbjct: 90 ALTMRQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 147
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA-- 234
+ + +K VHRD+ N L +SND +K+ DFG S + E+ Y+ G
Sbjct: 148 LSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPI 204
Query: 235 YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGN-IDFDSA 291
++APE + RR+ D+W GV ++ IL+ GV PF + I G +
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 264
Query: 292 PWPTISSGAKDLVRRMLTQDPKKR 315
PT+ S L+ + DP +R
Sbjct: 265 CPPTLYS----LMTKCWAYDPSRR 284
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 62 YEDVKSHYTMGKELGRGQYGI----IYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
YE + +G+ +G GQ+G IY+ EN A + S + R+ +E
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPA---LAVAIKTCKNCTSDSVREKFLQE 58
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFR-D 176
M+ P+IV+ G + V I+MELC GEL + + + + A+ ++
Sbjct: 59 ALTMRQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 116
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA-- 234
+ + +K VHRD+ N L +SND +K+ DFG S + E+ Y+ G
Sbjct: 117 LSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPI 173
Query: 235 YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGN-IDFDSA 291
++APE + RR+ D+W GV ++ IL+ GV PF + I G +
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 233
Query: 292 PWPTISSGAKDLVRRMLTQDPKKR 315
PT+ S L+ + DP +R
Sbjct: 234 CPPTLYS----LMTKCWAYDPSRR 253
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 62 YEDVKSHYTMGKELGRGQYGI----IYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
YE + +G+ +G GQ+G IY+ EN A + S + R+ +E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPA---LAVAIKTCKNCTSDSVREKFLQE 61
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFR-D 176
M+ P+IV+ G + V I+MELC GEL + + + + A+ ++
Sbjct: 62 ALTMRQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 119
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA-- 234
+ + +K VHRD+ N L +SND +K+ DFG S + E+ Y+ G
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 235 YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGN-IDFDSA 291
++APE + RR+ D+W GV ++ IL+ GV PF + I G +
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 292 PWPTISSGAKDLVRRMLTQDPKKR 315
PT+ S L+ + DP +R
Sbjct: 237 CPPTLYS----LMTKCWAYDPSRR 256
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 133/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ DF + ++ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFYLARHTDDEMT--GYV 183
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 297
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPV 319
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 31/260 (11%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSG--QPNIVE 132
LGRG +G ++ + TG Q A K V R ++ R ++M +G P IV
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV----------RLEVFRAEELMA-CAGLTSPRIVP 149
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
GA + +V+I MEL G L + +G E A + + H++ ++H
Sbjct: 150 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHG 209
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV------GSAYYVAPE-VLRRR 245
D+K +N L +S+ +A + DFG + + + + ++ G+ ++APE VL R
Sbjct: 210 DVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 246 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPW----PTISSGAK 301
++D+WS+ ++ +L+G P W + F L I + P P+ +
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHP-WTQ----FFRGPLCLKIASEPPPVREIPPSCAPLTA 322
Query: 302 DLVRRMLTQDPKKRITAAEV 321
++ L ++P R++AAE+
Sbjct: 323 QAIQEGLRKEPIHRVSAAEL 342
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 129
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ FG + ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILGFGLARHTDDEMT--GYVA 184
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 298
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 299 AAQALAHAYFAQYHDPDDEPV 319
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 22/264 (8%)
Query: 62 YEDVKSHYTMGKELGRGQYGI----IYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
YE + +G+ +G GQ+G IY+ EN A K+ + S + R+ +E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKTC--KNCTSDSVREKFLQE 61
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFR-D 176
M+ P+IV+ G + V I+MELC GEL + + + + A+ ++
Sbjct: 62 ALTMRQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 119
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA-- 234
+ + +K VHRD+ N L +SND +K+ DFG S + E+ Y+ G
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 235 YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQG-NIDFDSA 291
++APE + RR+ D+W GV ++ IL+ GV PF + I G +
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 292 PWPTISSGAKDLVRRMLTQDPKKR 315
PT+ S L+ + DP +R
Sbjct: 237 CPPTLYS----LMTKCWAYDPSRR 256
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 121/267 (45%), Gaps = 27/267 (10%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G G+++ +G A K + + R+ I RE+Q++ H P IV F
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 72
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG----- 188
GA+ + I ME DG D+++ K A + I+ V++ KG
Sbjct: 73 YGAFYSDGEISICMEH-MDGGSLDQVLKK-------AGRIPEQILGKVSIAVIKGLTYLR 124
Query: 189 ----VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR- 243
++HRD+KP N L S E +K+ DFG S + ++ + VG+ Y++PE L+
Sbjct: 125 EKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID-EMANEFVGTRSYMSPERLQG 180
Query: 244 RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDL 303
Y + DIWS G+ L + G P + D I+ N P S +D
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIV--NEPPPKLPSAVFSLEFQDF 238
Query: 304 VRRMLTQDPKKRITAAEVLEHPWLKES 330
V + L ++P +R +++ H ++K S
Sbjct: 239 VNKCLIKNPAERADLKQLMVHAFIKRS 265
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 136/307 (44%), Gaps = 51/307 (16%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 80
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLC-QVIQMELDHERMSYLLYQMLCG 138
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY AP
Sbjct: 139 IKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPEVVTRYYRAP 194
Query: 240 EV-LRRRYGKEIDIWSAGVILYILLSGVPPF--------WAETEKGI------FDAILQG 284
EV L Y + +DIWS G I+ ++ G F W + + + F LQ
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 285 NID-----------------FDSAPWPTIS-------SGAKDLVRRMLTQDPKKRITAAE 320
+ F +P S S A+DL+ +ML D KRI+ E
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDE 314
Query: 321 VLEHPWL 327
L+HP++
Sbjct: 315 ALQHPYI 321
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 62/334 (18%)
Query: 45 SGPEP----LPHSPDTILGKPYEDVKSH---------YTMGKELGRGQYGIIYLCIENST 91
SGP P + +T + Y D +SH Y + ++LGRG+Y ++ I N T
Sbjct: 2 SGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAI-NIT 60
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFVHIVMEL 149
+ + K K KRE++I+++L G PNI+ +D R +V E
Sbjct: 61 NNEKVVVKILKPVKKKKI-----KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 115
Query: 150 CADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAI 209
+ + Y R +I+ ++ CH+ G++HRD+KP N + + E+
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMY---EILKALDYCHSMGIMHRDVKPHNVMI--DHEHRK 170
Query: 210 MKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVP 267
+++ D+G + F+ G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
Query: 268 PFWAETE--------------KGIFDAILQGNIDFD--------------------SAPW 293
PF+ + + ++D I + NI+ D S
Sbjct: 231 PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQ 290
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+S A D + ++L D + R+TA E +EHP+
Sbjct: 291 HLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 78.6 bits (192), Expect = 8e-15, Method: Composition-based stats.
Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Query: 366 NLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGT 425
NL E+I + KE F D DNNG++S EL + LG +E+++ M D+DGN
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 426 IDYIEFITATMQRHKLERFEH-LYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIAT 484
I++ EF+ ++ K E L +AF+ FDK+ G I+ EL+ ++G+ T A
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLT--SIGEKLTDAE 120
Query: 485 IKEIMSEVDRDKDGRISYDEFRAMM 509
+ +++ EV D G I+ +F A++
Sbjct: 121 VDDMLREVS-DGSGEINIQQFAALL 144
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 22/264 (8%)
Query: 62 YEDVKSHYTMGKELGRGQYGI----IYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
YE + +G+ +G GQ+G IY+ EN A K+ + S + R+ +E
Sbjct: 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKTC--KNCTSDSVREKFLQE 441
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFR-D 176
M+ P+IV+ G + V I+MELC GEL + + + A+ ++
Sbjct: 442 ALTMRQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 499
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA-- 234
+ + +K VHRD+ N L +SND +K+ DFG S + E+ Y+ G
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 235 YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGN-IDFDSA 291
++APE + RR+ D+W GV ++ IL+ GV PF + I G +
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 616
Query: 292 PWPTISSGAKDLVRRMLTQDPKKR 315
PT+ S L+ + DP +R
Sbjct: 617 CPPTLYS----LMTKCWAYDPSRR 636
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 54/321 (16%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++H+ G ++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 129
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ I+ + H+ ++HRDLKP N + +E+ +K+ D G + ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDAGLARHTDDEMT--GYVA 184
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF--------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 270 ------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRIT 317
+E+ + ++ Q N+ + P A DL+ +ML D KRIT
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRIT 298
Query: 318 AAEVLEHPWLKESGKASDKPI 338
AA+ L H + + D+P+
Sbjct: 299 AAQALAHAYFAQYHDPDDEPV 319
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 62/334 (18%)
Query: 45 SGPEP----LPHSPDTILGKPYEDVKSH---------YTMGKELGRGQYGIIYLCIENST 91
SGP P + +T + Y D +SH Y + ++LGRG+Y ++ I N T
Sbjct: 2 SGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAI-NIT 60
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFVHIVMEL 149
+ + K K KRE++I+++L G PNI+ +D R +V E
Sbjct: 61 NNEKVVVKILKPVKKKKI-----KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 115
Query: 150 CADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAI 209
+ + Y R +I+ ++ CH+ G++HRD+KP N + + E+
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMY---EILKALDYCHSMGIMHRDVKPHNVMI--DHEHRK 170
Query: 210 MKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVP 267
+++ D+G + F+ G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
Query: 268 PFWAETE--------------KGIFDAILQGNIDFD--------------------SAPW 293
PF+ + + ++D I + NI+ D S
Sbjct: 231 PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQ 290
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+S A D + ++L D + R+TA E +EHP+
Sbjct: 291 HLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 62/334 (18%)
Query: 45 SGPEP----LPHSPDTILGKPYEDVKSH---------YTMGKELGRGQYGIIYLCIENST 91
SGP P + +T + Y D +SH Y + ++LGRG+Y ++ I N T
Sbjct: 2 SGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAI-NIT 60
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFVHIVMEL 149
+ + K K KRE++I+++L G PNI+ +D R +V E
Sbjct: 61 NNEKVVVKILKPVKKKKI-----KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 115
Query: 150 CADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAI 209
+ + Y R +I+ ++ CH+ G++HRD+KP N + + E+
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMY---EILKALDYCHSMGIMHRDVKPHNVMI--DHEHRK 170
Query: 210 MKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVP 267
+++ D+G + F+ G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
Query: 268 PFWAETE--------------KGIFDAILQGNIDFD--------------------SAPW 293
PF+ + + ++D I + NI+ D S
Sbjct: 231 PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQ 290
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+S A D + ++L D + R+TA E +EHP+
Sbjct: 291 HLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 62/334 (18%)
Query: 45 SGPEP----LPHSPDTILGKPYEDVKSH---------YTMGKELGRGQYGIIYLCIENST 91
SGP P + +T + Y D +SH Y + ++LGRG+Y ++ I N T
Sbjct: 2 SGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAI-NIT 60
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFVHIVMEL 149
+ + K K KRE++I+++L G PNI+ +D R +V E
Sbjct: 61 NNEKVVVKILKPVKKKKI-----KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 115
Query: 150 CADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAI 209
+ + Y R +I+ ++ CH+ G++HRD+KP N + + E+
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMY---EILKALDYCHSMGIMHRDVKPHNVMI--DHEHRK 170
Query: 210 MKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVP 267
+++ D+G + F+ G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
Query: 268 PFWAETE--------------KGIFDAILQGNIDFD--------------------SAPW 293
PF+ + + ++D I + NI+ D S
Sbjct: 231 PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQ 290
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+S A D + ++L D + R+TA E +EHP+
Sbjct: 291 HLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 62/334 (18%)
Query: 45 SGPEP----LPHSPDTILGKPYEDVKSH---------YTMGKELGRGQYGIIYLCIENST 91
SGP P + +T + Y D +SH Y + ++LGRG+Y ++ I N T
Sbjct: 2 SGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAI-NIT 60
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFVHIVMEL 149
+ + K K KRE++I+++L G PNI+ +D R +V E
Sbjct: 61 NNEKVVVKILKPVKKKKI-----KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 115
Query: 150 CADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAI 209
+ + Y R +I+ ++ CH+ G++HRD+KP N + + E+
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMY---EILKALDYCHSMGIMHRDVKPHNVMI--DHEHRK 170
Query: 210 MKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVP 267
+++ D+G + F+ G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
Query: 268 PFWAETE--------------KGIFDAILQGNIDFD--------------------SAPW 293
PF+ + + ++D I + NI+ D S
Sbjct: 231 PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQ 290
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+S A D + ++L D + R+TA E +EHP+
Sbjct: 291 HLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 58/323 (17%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK----R 116
P+ D S Y ++G+G +G ++ TG++ VA +K++ + +++ R
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQK-----VALKKVLMENEKEGFPITALR 66
Query: 117 EVQIMQHLSGQP--NIVEF----KGAYEDMR-FVHIVMELCAD--GELFDRIIAKGHYSE 167
E++I+Q L + N++E Y + +++V + C L ++ K SE
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 126
Query: 168 RAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGK-- 225
V + +++ + H ++HRD+K N L T + ++K+ DFG + F K
Sbjct: 127 --IKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNS 181
Query: 226 ---VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDA 280
Y + V + +Y PE+L R YG ID+W AG I+ + + P TE+
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
Query: 281 ILQGNIDFDSAPWPTISS----------------------------GAKDLVRRMLTQDP 312
I Q WP + + A DL+ ++L DP
Sbjct: 242 ISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP 301
Query: 313 KKRITAAEVLEHPWLKESGKASD 335
+RI + + L H + SD
Sbjct: 302 AQRIDSDDALNHDFFWSDPMPSD 324
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 132/299 (44%), Gaps = 42/299 (14%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLS-----GQ 127
+ +G G YG + + ++ A K ++ R S RE+++++HL G
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTK 187
++ + ED V++V L G + I+ S+ + ++ + H+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRR--R 245
G++HRDLKP N + +E++ +++ DFG + +E V + +Y APE++
Sbjct: 151 GIIHRDLKPSN---VAVNEDSELRILDFGLARQADEEMT--GYVATRWYRAPEIMLNWMH 205
Query: 246 YGKEIDIWSAGVILYILLSGVPPF----WAETEKGIFDAI------LQGNIDFDSA---- 291
Y + +DIWS G I+ LL G F + + K I + + + I + A
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 265
Query: 292 ----PWP-----TISSGAK----DLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKP 337
P P +I GA DL+ RML D +R++AAE L H + + D+P
Sbjct: 266 QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 126/319 (39%), Gaps = 62/319 (19%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK--REVQIMQ---- 122
Y++GK LG G +GI+ + +G++FA K V + + D +K V I++
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDY 68
Query: 123 -------------------HLSGQPNIVEFKGAY-----EDMRFVHIVMELCADG--ELF 156
L G+ N V ++++++ME D ++
Sbjct: 69 FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128
Query: 157 DRIIAKGHYSERAAASVF-RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDF 215
I G S++ + V H+ G+ HRD+KP+N L S D +K+ DF
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT--LKLCDF 186
Query: 216 GFSFFFEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAET 273
G + + + S +Y APE++ Y ID+WS G + L+ G P F ET
Sbjct: 187 GSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGET 246
Query: 274 EKGIFDAILQ------------GNIDFDSAPWPTI-------------SSGAKDLVRRML 308
I+Q N + +PT+ S A DL+ ++L
Sbjct: 247 SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQIL 306
Query: 309 TQDPKKRITAAEVLEHPWL 327
+P RI E + HP+
Sbjct: 307 RYEPDLRINPYEAMAHPFF 325
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 133/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ D G + ++ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDRGLARHTDDEMT--GYV 183
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 297
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPV 319
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 135/309 (43%), Gaps = 44/309 (14%)
Query: 64 DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
+V++ Y + +G G YG + ++ TG + A K + R S+ RE+++++H
Sbjct: 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLY-RPFQSELFAKRAYRELRLLKH 80
Query: 124 LSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDI 177
+ + N++ + +D ++VM G +++ E + +
Sbjct: 81 MRHE-NVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQM 137
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYV 237
+ + H G++HRDLKP N + +E+ +K+ DFG + + V + +Y
Sbjct: 138 LKGLRYIHAAGIIHRDLKPGNL---AVNEDCELKILDFGLAR--QADSEMXGXVVTRWYR 192
Query: 238 APEVLRR--RYGKEIDIWSAGVILYILLSG---------------------VPP--FWAE 272
APEV+ RY + +DIWS G I+ +++G PP F
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252
Query: 273 TEKGIFDAILQGNIDFDSAPWPTISSGAK----DLVRRMLTQDPKKRITAAEVLEHPWLK 328
+ ++G + + + +I + A +L+ +ML D ++R+TA E L HP+ +
Sbjct: 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
Query: 329 ESGKASDKP 337
D+P
Sbjct: 313 SLHDTEDEP 321
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 62/334 (18%)
Query: 45 SGPEP----LPHSPDTILGKPYEDVKSH---------YTMGKELGRGQYGIIYLCIENST 91
SGP P + +T + Y D +SH Y + ++LGRG+Y ++ I N T
Sbjct: 1 SGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAI-NIT 59
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFVHIVMEL 149
+ + K K KRE++I+++L G PNI+ +D R +V E
Sbjct: 60 NNEKVVVKILKPVKKKKI-----KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 114
Query: 150 CADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAI 209
+ + Y R +I+ ++ CH+ G++HRD+KP N + + E+
Sbjct: 115 VNNTDFKQLYQTLTDYDIRFYMY---EILKALDYCHSMGIMHRDVKPHNVMI--DHEHRK 169
Query: 210 MKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVP 267
+++ D+G + F+ G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 170 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 229
Query: 268 PFWAETE--------------KGIFDAILQGNIDFD--------------------SAPW 293
PF+ + + ++D I + NI+ D S
Sbjct: 230 PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQ 289
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+S A D + ++L D + R+TA E +EHP+
Sbjct: 290 HLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 62/334 (18%)
Query: 45 SGPEP----LPHSPDTILGKPYEDVKSH---------YTMGKELGRGQYGIIYLCIENST 91
SGP P + +T + Y D +SH Y + ++LGRG+Y ++ I N T
Sbjct: 2 SGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAI-NIT 60
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFVHIVMEL 149
+ + K K KRE++I+++L G PNI+ +D R +V E
Sbjct: 61 NNEKVVVKILKPVKKKKI-----KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 115
Query: 150 CADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAI 209
+ + Y R +I+ ++ CH+ G++HRD+KP N + + E+
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMY---EILKALDYCHSMGIMHRDVKPHNVMI--DHEHRK 170
Query: 210 MKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVP 267
+++ D+G + F+ G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
Query: 268 PFWAETE--------------KGIFDAILQGNIDFD--------------------SAPW 293
PF+ + + ++D I + NI+ D S
Sbjct: 231 PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQ 290
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+S A D + ++L D + R+TA E +EHP+
Sbjct: 291 HLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 137/313 (43%), Gaps = 63/313 (20%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 80
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLC-QVIQMELDHERMSYLLYQMLCG 138
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGF------SFFFEEGKVYRDIVGS 233
+ ++ H+ G++HRDLKP N + S + +K+ DFG SF E V R
Sbjct: 139 IKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVVTR----- 189
Query: 234 AYYVAPEV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPF 269
YY APEV L Y + +D+WS G I+ IL G P F
Sbjct: 190 -YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEF 248
Query: 270 WAETEKGIFDAI-------------LQGNIDF--DSAPWPTISSGAKDLVRRMLTQDPKK 314
+ + + + L ++ F DS +S A+DL+ +ML D K
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 315 RITAAEVLEHPWL 327
RI+ E L+HP++
Sbjct: 309 RISVDEALQHPYI 321
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 62/334 (18%)
Query: 45 SGPEP----LPHSPDTILGKPYEDVKSH---------YTMGKELGRGQYGIIYLCIENST 91
SGP P + +T + Y D +SH Y + ++LGRG+Y ++ I N T
Sbjct: 2 SGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAI-NIT 60
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFVHIVMEL 149
+ + K K KRE++I+++L G PNI+ +D R +V E
Sbjct: 61 NNEKVVVKILKPVKKKKI-----KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 115
Query: 150 CADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAI 209
+ + Y R +I+ ++ CH+ G++HRD+KP N + + E+
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMY---EILKALDYCHSMGIMHRDVKPHNVMI--DHEHRK 170
Query: 210 MKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVP 267
+++ D+G + F+ G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
Query: 268 PFWAETE--------------KGIFDAILQGNIDFD--------------------SAPW 293
PF+ + + ++D I + NI+ D S
Sbjct: 231 PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQ 290
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+S A D + ++L D + R+TA E +EHP+
Sbjct: 291 HLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 51/289 (17%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G +G + R +A K + ++ I EV ++ L+ Q + +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 135 GAYEDMRFVH------------IVMELCADGELFDRIIAKGHYSER-AAASVFRDIMHVV 181
E FV I ME C + L+D I ++ +R +FR I+ +
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 182 NVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI----------- 230
+ H++G++HRDLKP N DE+ +K+ DFG + V+R +
Sbjct: 130 SYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLA-----KNVHRSLDILKLDSQNLP 181
Query: 231 ---------VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK-GIF 278
+G+A YVA EVL Y ++ID++S G+I + + + PF E+ I
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNIL 238
Query: 279 DAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+ +I+F K ++R ++ DP KR A +L WL
Sbjct: 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 62/334 (18%)
Query: 45 SGPEP----LPHSPDTILGKPYEDVKSH---------YTMGKELGRGQYGIIYLCIENST 91
SGP P + +T + Y D +SH Y + ++LGRG+Y ++ I N T
Sbjct: 1 SGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAI-NIT 59
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFVHIVMEL 149
+ + K K KRE++I+++L G PNI+ +D R +V E
Sbjct: 60 NNEKVVVKILKPVKKKKI-----KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 114
Query: 150 CADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAI 209
+ + Y R +I+ ++ CH+ G++HRD+KP N + + E+
Sbjct: 115 VNNTDFKQLYQTLTDYDIRFYMY---EILKALDYCHSMGIMHRDVKPHNVMI--DHEHRK 169
Query: 210 MKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVP 267
+++ D+G + F+ G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 170 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 229
Query: 268 PFWAETE--------------KGIFDAILQGNIDFD--------------------SAPW 293
PF+ + + ++D I + NI+ D S
Sbjct: 230 PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQ 289
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+S A D + ++L D + R+TA E +EHP+
Sbjct: 290 HLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 133/322 (41%), Gaps = 56/322 (17%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V Y +G G YG + + TG + A K ++ R S RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMQHLSGQPNIVEFKGAY------EDMRFVHIVMELCADGELFDRIIAKGHYSERAAA 171
+++++H+ + N++ + E+ V++V L G + I+ ++
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 172 SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
+ I+ + H+ ++HRDLKP N + +E+ +K+ D G + ++ V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDGGLARHTDDEMT--GYV 183
Query: 232 GSAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF-------------------- 269
+ +Y APE++ Y + +DIWS G I+ LL+G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 270 -------WAETEKGIFDAILQ------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRI 316
+E+ + ++ Q N+ + P A DL+ +ML D KRI
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL------AVDLLEKMLVLDSDKRI 297
Query: 317 TAAEVLEHPWLKESGKASDKPI 338
TAA+ L H + + D+P+
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPV 319
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 139/315 (44%), Gaps = 58/315 (18%)
Query: 60 KPYEDVKSH---------YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD 110
+ Y D +SH Y + ++LGRG+Y ++ I N T + + K K
Sbjct: 19 REYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAI-NITNNEKVVVKILKPVKKKKI- 76
Query: 111 RDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFVHIVMELCADGELFDRIIAKGHYSER 168
KRE++I+++L G PNI+ +D R +V E + + Y R
Sbjct: 77 ----KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR 132
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYR 228
+I+ ++ CH+ G++HRD+KP N + + E+ +++ D+G + F+ G+ Y
Sbjct: 133 FYMY---EILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYN 187
Query: 229 DIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE------------ 274
V S Y+ PE+L + Y +D+WS G +L ++ PF+ +
Sbjct: 188 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 247
Query: 275 --KGIFDAILQGNIDFD--------------------SAPWPTISSGAKDLVRRMLTQDP 312
+ ++D I + NI+ D S +S A D + ++L D
Sbjct: 248 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 307
Query: 313 KKRITAAEVLEHPWL 327
+ R+TA E +EHP+
Sbjct: 308 QSRLTAREAMEHPYF 322
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 135/314 (42%), Gaps = 42/314 (13%)
Query: 58 LGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
L K +V + +G G YG + + ++ A K ++ R S RE
Sbjct: 11 LNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRE 69
Query: 118 VQIMQHLS-----GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+++++HL G ++ + ED V++V L G + I+ S+
Sbjct: 70 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQF 127
Query: 173 VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG 232
+ ++ + H+ G++HRDLKP N + +E+ +++ DFG + +E V
Sbjct: 128 LVYQLLRGLKYIHSAGIIHRDLKPSN---VAVNEDCELRILDFGLARQADEEMT--GYVA 182
Query: 233 SAYYVAPEVLRR--RYGKEIDIWSAGVILYILLSGVPPF----WAETEKGIFDAI----- 281
+ +Y APE++ Y + +DIWS G I+ LL G F + + K I + +
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSP 242
Query: 282 -LQGNIDFDSA--------PWP-----TISSGAK----DLVRRMLTQDPKKRITAAEVLE 323
+ I + A P P +I GA DL+ RML D +R++AAE L
Sbjct: 243 EVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALA 302
Query: 324 HPWLKESGKASDKP 337
H + + D+P
Sbjct: 303 HAYFSQYHDPEDEP 316
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 136/307 (44%), Gaps = 51/307 (16%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 27 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 85
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ +
Sbjct: 86 NHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLC-QVIQMELDHERMSYLLYQMLCG 143
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY AP
Sbjct: 144 IKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 199
Query: 240 EV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEK 275
EV L Y + +D+WS G I+ IL G P F + +
Sbjct: 200 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 259
Query: 276 GIFDAI-------------LQGNIDF--DSAPWPTISSGAKDLVRRMLTQDPKKRITAAE 320
+ + L ++ F DS +S A+DL+ +ML D KRI+ E
Sbjct: 260 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 319
Query: 321 VLEHPWL 327
L+HP++
Sbjct: 320 ALQHPYI 326
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 58/323 (17%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK----R 116
P+ D S Y ++G+G +G ++ TG++ VA +K++ + +++ R
Sbjct: 11 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQK-----VALKKVLMENEKEGFPITALR 65
Query: 117 EVQIMQHLSGQP--NIVEF----KGAYEDMR-FVHIVMELCAD--GELFDRIIAKGHYSE 167
E++I+Q L + N++E Y + +++V + C L ++ K SE
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 125
Query: 168 RAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGK-- 225
V + +++ + H ++HRD+K N L T + ++K+ DFG + F K
Sbjct: 126 --IKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNS 180
Query: 226 ---VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDA 280
Y + V + +Y PE+L R YG ID+W AG I+ + + P TE+
Sbjct: 181 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 240
Query: 281 ILQGNIDFDSAPWPTISS----------------------------GAKDLVRRMLTQDP 312
I Q WP + + A DL+ ++L DP
Sbjct: 241 ISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP 300
Query: 313 KKRITAAEVLEHPWLKESGKASD 335
+RI + + L H + SD
Sbjct: 301 AQRIDSDDALNHDFFWSDPMPSD 323
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 58/323 (17%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK----R 116
P+ D S Y ++G+G +G ++ TG++ VA +K++ + +++ R
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQK-----VALKKVLMENEKEGFPITALR 66
Query: 117 EVQIMQHLSGQP--NIVEF----KGAYEDMRF-VHIVMELCAD--GELFDRIIAKGHYSE 167
E++I+Q L + N++E Y + +++V + C L ++ K SE
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE 126
Query: 168 RAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGK-- 225
V + +++ + H ++HRD+K N L T + ++K+ DFG + F K
Sbjct: 127 --IKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNS 181
Query: 226 ---VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDA 280
Y + V + +Y PE+L R YG ID+W AG I+ + + P TE+
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
Query: 281 ILQGNIDFDSAPWPTISS----------------------------GAKDLVRRMLTQDP 312
I Q WP + + A DL+ ++L DP
Sbjct: 242 ISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP 301
Query: 313 KKRITAAEVLEHPWLKESGKASD 335
+RI + + L H + SD
Sbjct: 302 AQRIDSDDALNHDFFWSDPMPSD 324
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 136/307 (44%), Gaps = 51/307 (16%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQ-- 122
V Y K +G G GI+ + R A K ++ R ++T RE+ +M+
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 74
Query: 123 ---HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
++ G N+ + + E+ + V+IVMEL D L ++I ER + +++ +
Sbjct: 75 NHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLC-QVIQMELDHERMSYLLYQMLCG 132
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAP 239
+ ++ H+ G++HRDLKP N + S + +K+ DFG + + V + YY AP
Sbjct: 133 IKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
Query: 240 EV-LRRRYGKEIDIWSAGVIL------YILLSG-----------------VPPFWAETEK 275
EV L Y + +D+WS G I+ IL G P F + +
Sbjct: 189 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 248
Query: 276 GIFDAI-------------LQGNIDF--DSAPWPTISSGAKDLVRRMLTQDPKKRITAAE 320
+ + L ++ F DS +S A+DL+ +ML D KRI+ E
Sbjct: 249 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 308
Query: 321 VLEHPWL 327
L+HP++
Sbjct: 309 ALQHPYI 315
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 34/229 (14%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V +Y + +GRG YG +YL + +T + A K V R D I RE+ I+ L
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV-NRMFEDLIDCKRILREITILNRL 82
Query: 125 SGQPNIVEFKGAYED--MRF--VHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHV 180
I + D ++F ++IV+E+ AD +L +E ++ +++
Sbjct: 83 KSDYIIRLYDLIIPDDLLKFDELYIVLEI-ADSDLKKLFKTPIFLTEEHIKTILYNLLLG 141
Query: 181 VNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGK---VYRDI------- 230
N H G++HRDLKP N L +++ +KV DFG + K + D+
Sbjct: 142 ENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 231 -------------VGSAYYVAPE--VLRRRYGKEIDIWSAGVILYILLS 264
V + +Y APE +L+ Y K IDIWS G I LL+
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 293 WPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE---------SGKASDKPIDTAVI 343
+P+IS +L+ ML +P KRIT + L+HP+LK+ S K P D ++
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKKIILPFDDWMV 390
Query: 344 FRMKQFRAM 352
Q R +
Sbjct: 391 LSETQLRYI 399
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 58/323 (17%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK----R 116
P+ D S Y ++G+G +G ++ TG++ VA +K++ + +++ R
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQK-----VALKKVLMENEKEGFPITALR 66
Query: 117 EVQIMQHLSGQP--NIVEF----KGAYEDMR-FVHIVMELCAD--GELFDRIIAKGHYSE 167
E++I+Q L + N++E Y + +++V + C L ++ K SE
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 126
Query: 168 RAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGK-- 225
V + +++ + H ++HRD+K N L T + ++K+ DFG + F K
Sbjct: 127 --IKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNS 181
Query: 226 ---VYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDA 280
Y + V + +Y PE+L R YG ID+W AG I+ + + P TE+
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
Query: 281 ILQGNIDFDSAPWPTISS----------------------------GAKDLVRRMLTQDP 312
I Q WP + + A DL+ ++L DP
Sbjct: 242 ISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP 301
Query: 313 KKRITAAEVLEHPWLKESGKASD 335
+RI + + L H + SD
Sbjct: 302 AQRIDSDDALNHDFFWSDPMPSD 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 62/334 (18%)
Query: 45 SGPEP----LPHSPDTILGKPYEDVKSH---------YTMGKELGRGQYGIIYLCIENST 91
SGP P + +T + Y D +SH Y + ++LGRG+Y ++ I N T
Sbjct: 2 SGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAI-NIT 60
Query: 92 GRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYED--MRFVHIVMEL 149
+ + K K KRE++I+++L G PNI+ +D R +V E
Sbjct: 61 NNEKVVVKILKPVKKKKI-----KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 115
Query: 150 CADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAI 209
+ + Y R +I+ ++ CH+ G++HRD+KP N + + E+
Sbjct: 116 VNNTDFKQLRQTLTDYDIRFYMY---EILKALDYCHSMGIMHRDVKPHNVMI--DHEHRK 170
Query: 210 MKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVP 267
+++ D+G + F+ G+ Y V S Y+ PE+L + Y +D+WS G +L ++
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
Query: 268 PFWAETE--------------KGIFDAILQGNIDFD--------------------SAPW 293
PF+ + + ++D I + NI+ D S
Sbjct: 231 PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQ 290
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+S A D + ++L D + R+TA E +EHP+
Sbjct: 291 HLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 125/253 (49%), Gaps = 20/253 (7%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LGRG +G ++ C +TG+ +ACK + K++L + E +I+ + + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 135 GAYEDMRFVHIVMELCADGELFDRII-----AKGHYSERA---AASVFRDIMHVVNVCHT 186
A+E + +VM + G++ I G RA A + + H+ H
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL----HQ 307
Query: 187 KGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV-YRDIVGSAYYVAPEVLR-R 244
+ +++RDLKPEN L D++ ++++D G + + G+ + G+ ++APE+L
Sbjct: 308 RNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 245 RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWP-TISSGAKDL 303
Y +D ++ GV LY +++ PF A EK + + L+ + + +P S +KD
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDF 423
Query: 304 VRRMLTQDPKKRI 316
+L +DP+KR+
Sbjct: 424 CEALLQKDPEKRL 436
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 30/271 (11%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD-----IKREVQIMQH 123
Y +G+ LG G ++L + R A K L + RD +RE Q
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKV-----LRADLARDPSFYLRFRREAQNAAA 68
Query: 124 LSGQPNIVEFKGAYEDMR----FVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
L+ P IV E +IVME L D + +G + + A V D
Sbjct: 69 LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRD---IVGSAY 235
+N H G++HRD+KP N L ++ NA+ KV DFG + + G ++G+A
Sbjct: 128 ALNFSHQNGIIHRDVKPANILISAT--NAV-KVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 236 YVAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSA 291
Y++PE R G + D++S G +LY +L+G PPF ++ + ++ + SA
Sbjct: 185 YLSPEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 241
Query: 292 PWPTISSGAKDLVRRMLTQDPKKRI-TAAEV 321
+S+ +V + L ++P+ R TAAE+
Sbjct: 242 RHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 125/253 (49%), Gaps = 20/253 (7%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LGRG +G ++ C +TG+ +ACK + K++L + E +I+ + + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 135 GAYEDMRFVHIVMELCADGELFDRII-----AKGHYSERA---AASVFRDIMHVVNVCHT 186
A+E + +VM + G++ I G RA A + + H+ H
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL----HQ 307
Query: 187 KGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV-YRDIVGSAYYVAPEVLR-R 244
+ +++RDLKPEN L D++ ++++D G + + G+ + G+ ++APE+L
Sbjct: 308 RNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 245 RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWP-TISSGAKDL 303
Y +D ++ GV LY +++ PF A EK + + L+ + + +P S +KD
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDF 423
Query: 304 VRRMLTQDPKKRI 316
+L +DP+KR+
Sbjct: 424 CEALLQKDPEKRL 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 125/253 (49%), Gaps = 20/253 (7%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LGRG +G ++ C +TG+ +ACK + K++L + E +I+ + + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 135 GAYEDMRFVHIVMELCADGELFDRII-----AKGHYSERA---AASVFRDIMHVVNVCHT 186
A+E + +VM + G++ I G RA A + + H+ H
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL----HQ 307
Query: 187 KGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV-YRDIVGSAYYVAPEVLR-R 244
+ +++RDLKPEN L D++ ++++D G + + G+ + G+ ++APE+L
Sbjct: 308 RNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 245 RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWP-TISSGAKDL 303
Y +D ++ GV LY +++ PF A EK + + L+ + + +P S +KD
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDF 423
Query: 304 VRRMLTQDPKKRI 316
+L +DP+KR+
Sbjct: 424 CEALLQKDPEKRL 436
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 51/272 (18%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD----------DIKREVQIMQ 122
K++G+G +G+++ GR KSV K + D + + +REV IM
Sbjct: 25 KQIGKGGFGLVH------KGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 123 HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH-----YSERAAASVFRDI 177
+L+ PNIV+ G + +VME G+L+ R++ K H R + I
Sbjct: 79 NLN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENA--IMKVTDFGFSFFFEEGKVYRDIVGSAY 235
++ N +VHRDL+ N S DENA KV DFG S + ++G+
Sbjct: 136 EYMQN--QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS--QQSVHSVSGLLGNFQ 191
Query: 236 YVAPEVL---RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDF---- 288
++APE + Y ++ D +S +ILY +L+G +G FD G I F
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTG---------EGPFDEYSYGKIKFINMI 242
Query: 289 -DSAPWPTISSGAKDLVRRML----TQDPKKR 315
+ PTI +R ++ + DPKKR
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 123/271 (45%), Gaps = 30/271 (11%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD-----IKREVQIMQH 123
Y +G+ LG G ++L + R A K L + RD +RE Q
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKV-----LRADLARDPSFYLRFRREAQNAAA 68
Query: 124 LSGQPNIVEFKGAYEDMR----FVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
L+ P IV E +IVME L D + +G + + A V D
Sbjct: 69 LN-HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRD---IVGSAY 235
+N H G++HRD+KP N + ++ NA+ KV DFG + + G ++G+A
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISAT--NAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 236 YVAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSA 291
Y++PE R G + D++S G +LY +L+G PPF ++ + ++ + SA
Sbjct: 185 YLSPEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 241
Query: 292 PWPTISSGAKDLVRRMLTQDPKKRI-TAAEV 321
+S+ +V + L ++P+ R TAAE+
Sbjct: 242 RHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 125/253 (49%), Gaps = 20/253 (7%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LGRG +G ++ C +TG+ +ACK + K++L + E +I+ + + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 135 GAYEDMRFVHIVMELCADGELFDRII-----AKGHYSERA---AASVFRDIMHVVNVCHT 186
A+E + +VM + G++ I G RA A + + H+ H
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL----HQ 307
Query: 187 KGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV-YRDIVGSAYYVAPEVLR-R 244
+ +++RDLKPEN L D++ ++++D G + + G+ + G+ ++APE+L
Sbjct: 308 RNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 245 RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWP-TISSGAKDL 303
Y +D ++ GV LY +++ PF A EK + + L+ + + +P S +KD
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDF 423
Query: 304 VRRMLTQDPKKRI 316
+L +DP+KR+
Sbjct: 424 CEALLQKDPEKRL 436
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 123/271 (45%), Gaps = 30/271 (11%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD-----IKREVQIMQH 123
Y +G+ LG G ++L + R A K L + RD +RE Q
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKV-----LRADLARDPSFYLRFRREAQNAAA 68
Query: 124 LSGQPNIVEFKGAYEDMR----FVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
L+ P IV E +IVME L D + +G + + A V D
Sbjct: 69 LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRD---IVGSAY 235
+N H G++HRD+KP N + ++ NA+ KV DFG + + G ++G+A
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISAT--NAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 236 YVAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSA 291
Y++PE R G + D++S G +LY +L+G PPF ++ + ++ + SA
Sbjct: 185 YLSPEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSA 241
Query: 292 PWPTISSGAKDLVRRMLTQDPKKRI-TAAEV 321
+S+ +V + L ++P+ R TAAE+
Sbjct: 242 RHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E I + K F D D G +S EL + LG T+ ++ ++ D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 427 DYIEFITATMQRHKLE----RFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
D+ EF+ +++ K + E L + F+ FD++ GYI +EL F+ G+ T
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRAS--GEHVTD 128
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMK 510
I+ +M + D++ DGRI +DEF MM+
Sbjct: 129 EEIESLMKDGDKNNDGRIDFDEFLKMME 156
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 288 FDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMK 347
FD+ IS V RML Q P K A + E + E G + ID +
Sbjct: 26 FDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEE---VDEDGSGT---ID------FE 73
Query: 348 QFRAMNKLKKLALKVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLT 407
+F M ++ + E+ + ++L E F D + +G + +EL G +T
Sbjct: 74 EFLVM------MVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVT 127
Query: 408 ESDIKQYMQAADIDGNGTIDYIEFI 432
+ +I+ M+ D + +G ID+ EF+
Sbjct: 128 DEEIESLMKDGDKNNDGRIDFDEFL 152
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 127/282 (45%), Gaps = 51/282 (18%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD--IKREVQIMQHLSGQPNIVE 132
L G + +Y + +GR++A K +L+S + + I +EV M+ LSG PNIV+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALK-----RLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ 90
Query: 133 FKGAYE---------DMRFVHIVMELCADG--ELFDRIIAKGHYSERAAASVFRDIMHVV 181
F A F+ ++ ELC E ++ ++G S +F V
Sbjct: 91 FCSAASIGKEESDTGQAEFL-LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 182 NVCHTK--GVVHRDLKPENFLFTSNDENAIMKVTDFG----------FSFFFE-----EG 224
H + ++HRDLK EN L ++ +K+ DFG +S+ + E
Sbjct: 150 QHMHRQKPPIIHRDLKVENLLLSN---QGTIKLCDFGSATTISHYPDYSWSAQRRALVEE 206
Query: 225 KVYRDIVGSAYYVAPEVL----RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDA 280
++ R+ + Y PE++ G++ DIW+ G ILY+L PF E G
Sbjct: 207 EITRNT--TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLR 260
Query: 281 ILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVL 322
I+ G + P T + L+R ML +P++R++ AEV+
Sbjct: 261 IVNGK--YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 128/312 (41%), Gaps = 37/312 (11%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y +LG G Y +Y T A K + R + REV +++ L
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEI--RLEHEEGAPCTAIREVSLLKDLK-HA 60
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFR-DIMHVVNVCHTK 187
NIV + + +V E D +L + G+ +F ++ + CH +
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE-EGKVYRDIVGSAYYVAPEVL--RR 244
V+HRDLKP+N L E +K+ DFG + K Y + V + +Y P++L
Sbjct: 120 KVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGST 176
Query: 245 RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ--------------GNIDFDS 290
Y +ID+W G I Y + +G P F T + I + N +F +
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236
Query: 291 APWPT------------ISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPI 338
+P + S DL+ ++L + + RI+A + ++HP+ G+ K
Sbjct: 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLP 296
Query: 339 DTAVIFRMKQFR 350
DT IF +K+ +
Sbjct: 297 DTTSIFALKEIQ 308
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 123/271 (45%), Gaps = 30/271 (11%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD-----IKREVQIMQH 123
Y +G+ LG G ++L + R A K L + RD +RE Q
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKV-----LRADLARDPSFYLRFRREAQNAAA 68
Query: 124 LSGQPNIVEFKGAYEDMR----FVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
L+ P IV E +IVME L D + +G + + A V D
Sbjct: 69 LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRD---IVGSAY 235
+N H G++HRD+KP N + ++ NA+ KV DFG + + G ++G+A
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISAT--NAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 236 YVAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSA 291
Y++PE R G + D++S G +LY +L+G PPF ++ + ++ + SA
Sbjct: 185 YLSPEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 241
Query: 292 PWPTISSGAKDLVRRMLTQDPKKRI-TAAEV 321
+S+ +V + L ++P+ R TAAE+
Sbjct: 242 RHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G ++ TG FA K + D RE ++++ L+ NIV+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLN-HKNIVKLF 73
Query: 135 GAYEDMRFVH--IVMELCADGELFDRIIAKGH---YSERAAASVFRDIMHVVNVCHTKGV 189
E+ H ++ME C G L+ + + E V RD++ +N G+
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 190 VHRDLKPENFL-FTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-----VLR 243
VHR++KP N + D ++ K+TDFG + E+ + + + G+ Y+ P+ VLR
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLR 193
Query: 244 R----RYGKEIDIWSAGVILYILLSGVPPF 269
+ +YG +D+WS GV Y +G PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 123/271 (45%), Gaps = 30/271 (11%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD-----IKREVQIMQH 123
Y +G+ LG G ++L + R A K L + RD +RE Q
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKV-----LRADLARDPSFYLRFRREAQNAAA 68
Query: 124 LSGQPNIVEFKGAYEDMR----FVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
L+ P IV E +IVME L D + +G + + A V D
Sbjct: 69 LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRD---IVGSAY 235
+N H G++HRD+KP N + ++ NA+ KV DFG + + G ++G+A
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISAT--NAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 236 YVAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSA 291
Y++PE R G + D++S G +LY +L+G PPF ++ + ++ + SA
Sbjct: 185 YLSPEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 241
Query: 292 PWPTISSGAKDLVRRMLTQDPKKRI-TAAEV 321
+S+ +V + L ++P+ R TAAE+
Sbjct: 242 RHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Query: 370 EEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYI 429
E+ Q+++E F D D GT+ ELK + LG + +IK+ + D +G G +++
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62
Query: 430 EFITATMQR-HKLERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEI 488
+F+T Q+ + + E + KAF+ FD D +G I+ L+ KE +G++ T ++E+
Sbjct: 63 DFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKE--LGENLTDEELQEM 120
Query: 489 MSEVDRDKDGRISYDEFRAMMK 510
+ E DRD DG +S EF +MK
Sbjct: 121 IDEADRDGDGEVSEQEFLRIMK 142
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G ++ TG FA K + D RE ++++ L+ NIV+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLN-HKNIVKLF 73
Query: 135 GAYEDMRFVH--IVMELCADGELFDRIIAKGH---YSERAAASVFRDIMHVVNVCHTKGV 189
E+ H ++ME C G L+ + + E V RD++ +N G+
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 190 VHRDLKPENFL-FTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPE-----VLR 243
VHR++KP N + D ++ K+TDFG + E+ + + + G+ Y+ P+ VLR
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLR 193
Query: 244 R----RYGKEIDIWSAGVILYILLSGVPPF 269
+ +YG +D+WS GV Y +G PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E I + K F D D G +S EL + LG T+ ++ ++ D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 427 DYIEFITATMQRHKLE----RFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
D+ EF+ +++ K + E L + F+ FD++ GYI +EL F+ G+ T
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRAS--GEHVTD 128
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMK 510
I+ +M + D++ DGRI +DEF MM+
Sbjct: 129 EEIESLMKDGDKNNDGRIDFDEFLKMME 156
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 288 FDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMK 347
FD+ IS V RML Q P K A + E + E G + ID +
Sbjct: 26 FDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEE---VDEDGSGT---ID------FE 73
Query: 348 QFRAMNKLKKLALKVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLT 407
+F M ++ + E+ + ++L E F D + +G + +EL G +T
Sbjct: 74 EFLVM------MVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVT 127
Query: 408 ESDIKQYMQAADIDGNGTIDYIEFI 432
+ +I+ M+ D + +G ID+ EF+
Sbjct: 128 DEEIESLMKDGDKNNDGRIDFDEFL 152
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 132/313 (42%), Gaps = 48/313 (15%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLS--- 125
Y +G G YG + I+ +G + A K ++ R S+ RE+ +++H+
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 126 --GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
G ++ + + ++VM +I+ +SE + ++ +
Sbjct: 103 VIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGM-EFSEEKIQYLVYQMLKGLKY 159
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR 243
H+ GVVHRDLKP N + +E+ +K+ DFG + + V + +Y APEV+
Sbjct: 160 IHSAGVVHRDLKPGNL---AVNEDCELKILDFGLARHADAEMT--GYVVTRWYRAPEVIL 214
Query: 244 R--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ----GNIDF--------- 288
Y + +DIWS G I+ +L+G F + IL+ +F
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 274
Query: 289 ----DSAP----------WPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLK-----E 329
S P +P S A DL+ +ML D KR+TAA+ L HP+ + E
Sbjct: 275 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE 334
Query: 330 SGKASDKPIDTAV 342
+ +P D ++
Sbjct: 335 EETEAQQPFDDSL 347
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 51/272 (18%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD----------DIKREVQIMQ 122
K++G+G +G+++ GR KSV K + D + + +REV IM
Sbjct: 25 KQIGKGGFGLVH------KGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 123 HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH-----YSERAAASVFRDI 177
+L+ PNIV+ G + +VME G+L+ R++ K H R + I
Sbjct: 79 NLN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENA--IMKVTDFGFSFFFEEGKVYRDIVGSAY 235
++ N +VHRDL+ N S DENA KV DFG S + ++G+
Sbjct: 136 EYMQN--QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS--QQSVHSVSGLLGNFQ 191
Query: 236 YVAPEVL---RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDF---- 288
++APE + Y ++ D +S +ILY +L+G +G FD G I F
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTG---------EGPFDEYSYGKIKFINMI 242
Query: 289 -DSAPWPTISSGAKDLVRRML----TQDPKKR 315
+ PTI +R ++ + DPKKR
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 72 GKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD------RDDIKREVQIMQHLS 125
G ++G G +G++Y N+T +VA +KL + D + +E+++M
Sbjct: 36 GNKMGEGGFGVVYKGYVNNT-------TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88
Query: 126 GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIA---KGHYSERAAASVFRDIMHVVN 182
+ N+VE G D + +V +G L DR+ S + + + +N
Sbjct: 89 HE-NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 183 VCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGF---SFFFEEGKVYRDIVGSAYYVAP 239
H +HRD+K N L DE K++DFG S F + + IVG+ Y+AP
Sbjct: 148 FLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAP 204
Query: 240 EVLRRRYGKEIDIWSAGVILYILLSGVP 267
E LR + DI+S GV+L +++G+P
Sbjct: 205 EALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 33/274 (12%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
E+GRG YG + + +G+ A K + R V + ++ + ++ ++ S P IV+F
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 134 KGAYEDMRFVHIVMELCADG---------ELFDRIIAKGHYSERAAASVFRDIMHVVNVC 184
GA I MEL + + D +I + + A+V + + H+
Sbjct: 87 YGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATV-KALNHLK--- 142
Query: 185 HTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL-- 242
++HRD+KP N L D + +K+ DFG S + G Y+APE +
Sbjct: 143 ENLKIIHRDIKPSNILL---DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDP 199
Query: 243 ---RRRYGKEIDIWSAGVILYILLSGVPPF--WAETEKGIFDAILQ----GNIDFDSAPW 293
R+ Y D+WS G+ LY L +G P+ W +FD + Q ++
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATGRFPYPKW----NSVFDQLTQVVKGDPPQLSNSEE 255
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
S + V LT+D KR E+L+HP++
Sbjct: 256 REFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 121/266 (45%), Gaps = 20/266 (7%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQP 128
Y +G+ LG G ++L + R A K + + +RE Q L+ P
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HP 89
Query: 129 NIVEFKGAYEDMR----FVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVC 184
IV E +IVME L D + +G + + A V D +N
Sbjct: 90 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 149
Query: 185 HTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS-FFFEEGKVYRD---IVGSAYYVAPE 240
H G++HRD+KP N + ++ NA+ KV DFG + + G ++G+A Y++PE
Sbjct: 150 HQNGIIHRDVKPANIMISAT--NAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
Query: 241 VLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTI 296
R G + D++S G +LY +L+G PPF ++ + ++ + SA +
Sbjct: 207 QAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 263
Query: 297 SSGAKDLVRRMLTQDPKKRI-TAAEV 321
S+ +V + L ++P+ R TAAE+
Sbjct: 264 SADLDAVVLKALAKNPENRYQTAAEM 289
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 72 GKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD------RDDIKREVQIMQHLS 125
G ++G G +G++Y N+T +VA +KL + D + +E+++M
Sbjct: 36 GNKMGEGGFGVVYKGYVNNT-------TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88
Query: 126 GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIA---KGHYSERAAASVFRDIMHVVN 182
+ N+VE G D + +V +G L DR+ S + + + +N
Sbjct: 89 HE-NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 183 VCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGF---SFFFEEGKVYRDIVGSAYYVAP 239
H +HRD+K N L DE K++DFG S F + + IVG+ Y+AP
Sbjct: 148 FLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAP 204
Query: 240 EVLRRRYGKEIDIWSAGVILYILLSGVP 267
E LR + DI+S GV+L +++G+P
Sbjct: 205 EALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 39/205 (19%)
Query: 176 DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY 235
+++ ++ CH+KG++HRD+KP N + + + +++ D+G + F+ + Y V S Y
Sbjct: 140 ELLKALDYCHSKGIMHRDVKPHNVMI--DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRY 197
Query: 236 YVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE--------------KGIFD 279
+ PE+L + Y +D+WS G +L ++ PF+ + + ++
Sbjct: 198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYG 257
Query: 280 AILQGNIDFDS-----------APWPT---------ISSGAKDLVRRMLTQDPKKRITAA 319
+ + +ID D W +S A DL+ ++L D ++R+TA
Sbjct: 258 YLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK 317
Query: 320 EVLEHPWLKESGKASDKP-IDTAVI 343
E +EHP+ K +P D AV+
Sbjct: 318 EAMEHPYFYPVVKEQSQPSADNAVL 342
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 131/313 (41%), Gaps = 48/313 (15%)
Query: 69 YTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLS--- 125
Y +G G YG + I+ +G + A K ++ R S+ RE+ +++H+
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 126 --GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV 183
G ++ + + ++VM +I+ E+ V++ ++ +
Sbjct: 85 VIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKFSEEKIQYLVYQ-MLKGLKY 141
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR 243
H+ GVVHRDLKP N + +E+ +K+ DFG + + V + +Y APEV+
Sbjct: 142 IHSAGVVHRDLKPGNL---AVNEDCELKILDFGLARHADAEMT--GYVVTRWYRAPEVIL 196
Query: 244 R--RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ-----------------G 284
Y + +DIWS G I+ +L+G F + IL+
Sbjct: 197 SWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 256
Query: 285 NIDFDSAP----------WPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLK-----E 329
S P +P S A DL+ +ML D KR+TAA+ L HP+ + E
Sbjct: 257 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE 316
Query: 330 SGKASDKPIDTAV 342
+ +P D ++
Sbjct: 317 EETEAQQPFDDSL 329
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 72 GKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD------RDDIKREVQIMQHLS 125
G ++G G +G++Y N+T +VA +KL + D + +E+++M
Sbjct: 30 GNKMGEGGFGVVYKGYVNNT-------TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 82
Query: 126 GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIA---KGHYSERAAASVFRDIMHVVN 182
+ N+VE G D + +V +G L DR+ S + + + +N
Sbjct: 83 HE-NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 141
Query: 183 VCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGF---SFFFEEGKVYRDIVGSAYYVAP 239
H +HRD+K N L DE K++DFG S F + + IVG+ Y+AP
Sbjct: 142 FLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAP 198
Query: 240 EVLRRRYGKEIDIWSAGVILYILLSGVP 267
E LR + DI+S GV+L +++G+P
Sbjct: 199 EALRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 133/292 (45%), Gaps = 36/292 (12%)
Query: 56 TILGKPYE-DVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDI 114
TI G+ Y+ ++ +G E+G G G ++ TG A K + R+ +K + I
Sbjct: 14 TIGGQRYQAEINDLENLG-EMGSGTCGQVWKMRFRKTGHVIAVKQM--RRSGNKEENKRI 70
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMEL---CADGELFDRIIAKGHYSERAAA 171
++ ++ P IV+ G + V I MEL CA+ +L R+ +G ER
Sbjct: 71 LMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAE-KLKKRM--QGPIPERILG 127
Query: 172 SVFRDIMHVVNVCHTK-GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
+ I+ + K GV+HRD+KP N L DE +K+ DFG S + K
Sbjct: 128 KMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLCDFGISGRLVDDKAKDRS 184
Query: 231 VGSAYYVAPEVL------RRRYGKEIDIWSAGVILYILLSGVPPFW-AETEKGIFDAILQ 283
G A Y+APE + + Y D+WS G+ L L +G P+ +T+ + +LQ
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
Query: 284 -------GNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
G++ F S + V+ LT+D +KR ++LEH ++K
Sbjct: 245 EEPPLLPGHMGF--------SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 62 YEDVKSHYTMGKELGRGQYGI----IYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
YE + +G+ +G GQ+G IY+ EN A K+ + S + R+ +E
Sbjct: 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKTC--KNCTSDSVREKFLQE 441
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFR-D 176
M+ P+IV+ G + V I+MELC GEL + + + A+ ++
Sbjct: 442 ALTMRQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 499
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA-- 234
+ + +K VHRD+ N L ++ D +K+ DFG S + E+ Y+ G
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 235 YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQGN-IDFDSA 291
++APE + RR+ D+W GV ++ IL+ GV PF + I G +
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 616
Query: 292 PWPTISSGAKDLVRRMLTQDPKKR 315
PT+ S L+ + DP +R
Sbjct: 617 CPPTLYS----LMTKCWAYDPSRR 636
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 62 YEDVKSHYTMGKELGRGQYGI----IYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
YE + +G+ +G GQ+G IY+ EN A K+ + S + R+ +E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKTC--KNCTSDSVREKFLQE 61
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFR-D 176
M+ P+IV+ G + V I+MELC GEL + + + A+ ++
Sbjct: 62 ALTMRQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 119
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA-- 234
+ + +K VHRD+ N L +SND +K+ DFG S + E+ + G
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTXXKASKGKLPI 176
Query: 235 YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQG-NIDFDSA 291
++APE + RR+ D+W GV ++ IL+ GV PF + I G +
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 292 PWPTISSGAKDLVRRMLTQDPKKR 315
PT+ S L+ + DP +R
Sbjct: 237 CPPTLYS----LMTKCWAYDPSRR 256
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E I + K F D D G +S EL + LG T+ ++ ++ D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 427 DYIEFITATMQRHKLE----RFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
D+ EF+ +++ K + E L F+ FDK+ G+I ++EL + G+ T
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT--GEHVTE 131
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMK 510
I+++M + D++ DGRI +DEF MM+
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 288 FDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMK 347
FD+ IS+ V RML Q+P K A + E + E G + ID +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE---VDEDGSGT---ID------FE 76
Query: 348 QFRAMNKLKKLALKVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLT 407
+F M ++ + E+ + ++L F D + +G + +EL L G +T
Sbjct: 77 EFLVM------MVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 408 ESDIKQYMQAADIDGNGTIDYIEFI 432
E DI+ M+ +D + +G ID+ EF+
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 132/307 (42%), Gaps = 65/307 (21%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G G+++ +G A K + + R+ I RE+Q++ H P IV F
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 69
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG----- 188
GA+ + I ME DG D+++ K A + I+ V++ KG
Sbjct: 70 YGAFYSDGEISICMEH-MDGGSLDQVLKK-------AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 189 ----VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR- 243
++HRD+KP N L S E +K+ DFG S + + VG+ Y++PE L+
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQG 177
Query: 244 RRYGKEIDIWSAGVILYILLSG---VPPFWAETEKGIFDAILQGN--------------- 285
Y + DIWS G+ L + G +PP A+ + +F ++G+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 286 ----------------IDF-DSAPWPTISSGA-----KDLVRRMLTQDPKKRITAAEVLE 323
+D+ + P P + SG +D V + L ++P +R +++
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
Query: 324 HPWLKES 330
H ++K S
Sbjct: 298 HAFIKRS 304
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E I + K F D D G +S EL + LG T+ ++ ++ D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 427 DYIEFITATMQRHKLE----RFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
D+ EF+ +++ K + E L F+ FDK+ G+I ++EL + G+ T
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILR--ATGEHVTE 128
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMKS 511
I+++M + D++ DGRI +DEF MM+
Sbjct: 129 EDIEDLMKDSDKNNDGRIDFDEFLKMMEG 157
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 288 FDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMK 347
FD+ IS+ V RML Q+P K A + E + E G + ID +
Sbjct: 26 FDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE---VDEDGSGT---ID------FE 73
Query: 348 QFRAMNKLKKLALKVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLT 407
+F M ++ + E+ + ++L F D + +G + +EL L G +T
Sbjct: 74 EFLVM------MVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT 127
Query: 408 ESDIKQYMQAADIDGNGTIDYIEFI 432
E DI+ M+ +D + +G ID+ EF+
Sbjct: 128 EEDIEDLMKDSDKNNDGRIDFDEFL 152
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 130/307 (42%), Gaps = 65/307 (21%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G G+++ +G A K + + R+ I RE+Q++ H P IV F
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 96
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG----- 188
GA+ + I ME DG D+++ K A + I+ V++ KG
Sbjct: 97 YGAFYSDGEISICMEH-MDGGSLDQVLKK-------AGRIPEQILGKVSIAVIKGLTYLR 148
Query: 189 ----VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR- 243
++HRD+KP N L S E +K+ DFG S + + VG+ Y++PE L+
Sbjct: 149 EKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQG 204
Query: 244 RRYGKEIDIWSAGVILYILLSG---VPPFWAETEKGIFDAILQGN--------------- 285
Y + DIWS G+ L + G +PP A+ + +F ++G+
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264
Query: 286 --IDFDS---------------APWPTISSGA-----KDLVRRMLTQDPKKRITAAEVLE 323
DS P P + SG +D V + L ++P +R +++
Sbjct: 265 NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324
Query: 324 HPWLKES 330
H ++K S
Sbjct: 325 HAFIKRS 331
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 117/267 (43%), Gaps = 19/267 (7%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL-VSKTDRDDIKREVQIMQHLS 125
S+ + + +G G++G + + G++ +C ++ K ++ R + E IM
Sbjct: 14 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE 73
Query: 126 GQPNIVEFKGAYEDMRFVHIVMELCADGEL--FDRIIAKGHYSERAAASVFRDIMHVVNV 183
PNI+ +G + V I+ E +G L F R+ G ++ + R I +
Sbjct: 74 -HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRY 131
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGK---VYRDIVGSAY---YV 237
VHRDL N L SN + KV+DFG S F EE Y +G +
Sbjct: 132 LAEMSYVHRDLAARNILVNSN---LVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 238 APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGNIDFDSAPWPT 295
APE + R++ D WS G++++ ++S G P+W + + + +AI Q D+ P P
Sbjct: 189 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ---DYRLPPPPD 245
Query: 296 ISSGAKDLVRRMLTQDPKKRITAAEVL 322
+ L+ +D R +V+
Sbjct: 246 CPTSLHQLMLDCWQKDRNARPRFPQVV 272
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 132/307 (42%), Gaps = 65/307 (21%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G G+++ +G A K + + R+ I RE+Q++ H P IV F
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 69
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG----- 188
GA+ + I ME DG D+++ K A + I+ V++ KG
Sbjct: 70 YGAFYSDGEISICMEH-MDGGSLDQVLKK-------AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 189 ----VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR- 243
++HRD+KP N L S E +K+ DFG S + + VG+ Y++PE L+
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQG 177
Query: 244 RRYGKEIDIWSAGVILYILLSG---VPPFWAETEKGIFDAILQGN--------------- 285
Y + DIWS G+ L + G +PP A+ + +F ++G+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 286 ----------------IDF-DSAPWPTISSGA-----KDLVRRMLTQDPKKRITAAEVLE 323
+D+ + P P + SG +D V + L ++P +R +++
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
Query: 324 HPWLKES 330
H ++K S
Sbjct: 298 HAFIKRS 304
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E I + K F D D G +S EL + LG T+ ++ ++ D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 427 DYIEFITATMQRHKLE----RFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
D+ EF+ +++ K + E L F+ FDK+ G+I ++EL + G+ T
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILR--ATGEHVTE 131
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMK 510
I+++M + D++ DGRI +DEF MM+
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 288 FDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMK 347
FD+ IS+ V RML Q+P K A + E + E G + ID +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE---VDEDGSGT---ID------FE 76
Query: 348 QFRAMNKLKKLALKVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLT 407
+F M ++ + E+ + ++L + F D + +G + +EL L G +T
Sbjct: 77 EFLVM------MVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 408 ESDIKQYMQAADIDGNGTIDYIEFI 432
E DI+ M+ +D + +G ID+ EF+
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 51/272 (18%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD----------DIKREVQIMQ 122
K++G+G +G+++ GR KSV K + D + + +REV IM
Sbjct: 25 KQIGKGGFGLVH------KGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 123 HLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH-----YSERAAASVFRDI 177
+L+ PNIV+ G + +VME G+L+ R++ K H R + I
Sbjct: 79 NLN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENA--IMKVTDFGFSFFFEEGKVYRDIVGSAY 235
++ N +VHRDL+ N S DENA KV DF S + ++G+
Sbjct: 136 EYMQN--QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS--QQSVHSVSGLLGNFQ 191
Query: 236 YVAPEVL---RRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDF---- 288
++APE + Y ++ D +S +ILY +L+G +G FD G I F
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTG---------EGPFDEYSYGKIKFINMI 242
Query: 289 -DSAPWPTISSGAKDLVRRML----TQDPKKR 315
+ PTI +R ++ + DPKKR
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E I + K F D D G +S EL + LG T+ ++ ++ D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 427 DYIEFITATMQRHKLE----RFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
D+ EF+ +++ K + E L F+ FDK+ G+I ++EL + G+ T
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILR--ATGEHVTE 131
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMK 510
I+++M + D++ DGRI +DEF MM+
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 18/145 (12%)
Query: 288 FDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMK 347
FD+ IS+ V RML Q+P K A + E + E G + ID +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE---VDEDGSGT---ID------FE 76
Query: 348 QFRAMNKLKKLALKVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLT 407
+F M ++ + E+ + ++L++ F D + +G + +EL L G +T
Sbjct: 77 EFLVM------MVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 408 ESDIKQYMQAADIDGNGTIDYIEFI 432
E DI+ M+ +D + +G ID+ EF+
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 62 YEDVKSHYTMGKELGRGQYGI----IYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
YE + +G+ +G GQ+G IY+ EN A K+ + S + R+ +E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENP-AMAVAIKTC--KNCTSDSVREKFLQE 61
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFR-D 176
M+ P+IV+ G + V I+MELC GEL + + + A+ ++
Sbjct: 62 ALTMRQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 119
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA-- 234
+ + +K VHRD+ N L ++ D +K+ DFG S + E+ Y+ G
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 235 YYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQG-NIDFDSA 291
++APE + RR+ D+W GV ++ IL+ GV PF + I G +
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 292 PWPTISSGAKDLVRRMLTQDPKKR 315
PT+ S L+ + DP +R
Sbjct: 237 CPPTLYS----LMTKCWAYDPSRR 256
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 132/307 (42%), Gaps = 65/307 (21%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G G+++ +G A K + + R+ I RE+Q++ H P IV F
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 69
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG----- 188
GA+ + I ME DG D+++ K A + I+ V++ KG
Sbjct: 70 YGAFYSDGEISICMEH-MDGGSLDQVLKK-------AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 189 ----VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR- 243
++HRD+KP N L S E +K+ DFG S + + VG+ Y++PE L+
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQG 177
Query: 244 RRYGKEIDIWSAGVILYILLSG---VPPFWAETEKGIFDAILQGN--------------- 285
Y + DIWS G+ L + G +PP A+ + +F ++G+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 286 ----------------IDF-DSAPWPTISSGA-----KDLVRRMLTQDPKKRITAAEVLE 323
+D+ + P P + SG +D V + L ++P +R +++
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
Query: 324 HPWLKES 330
H ++K S
Sbjct: 298 HAFIKRS 304
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 132/307 (42%), Gaps = 65/307 (21%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G G+++ +G A K + + R+ I RE+Q++ H P IV F
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 69
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG----- 188
GA+ + I ME DG D+++ K A + I+ V++ KG
Sbjct: 70 YGAFYSDGEISICMEH-MDGGSLDQVLKK-------AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 189 ----VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR- 243
++HRD+KP N L S E +K+ DFG S + + VG+ Y++PE L+
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQG 177
Query: 244 RRYGKEIDIWSAGVILYILLSG---VPPFWAETEKGIFDAILQGN--------------- 285
Y + DIWS G+ L + G +PP A+ + +F ++G+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 286 ----------------IDF-DSAPWPTISSGA-----KDLVRRMLTQDPKKRITAAEVLE 323
+D+ + P P + SG +D V + L ++P +R +++
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
Query: 324 HPWLKES 330
H ++K S
Sbjct: 298 HAFIKRS 304
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 114/282 (40%), Gaps = 17/282 (6%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
SP +P + + LG G YG ++ GR +A K + DR
Sbjct: 42 QSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDR 100
Query: 112 DDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKG-HYSERAA 170
EV + + P V + A+E+ +++ ELC L A G E
Sbjct: 101 ARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGP-SLQQHCEAWGASLPEAQV 159
Query: 171 ASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
RD + + H++G+VH D+KP N K+ DFG
Sbjct: 160 WGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGR---CKLGDFGLLVELGTAGAGEVQ 216
Query: 231 VGSAYYVAPEVLRRRYGKEIDIWSAGV-ILYILLSGVPPFWAETEKGIFDAILQGNI--D 287
G Y+APE+L+ YG D++S G+ IL + + P E + + QG + +
Sbjct: 217 EGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG----WQQLRQGYLPPE 272
Query: 288 FDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
F + +SS + ++ ML DPK R TA +L P L++
Sbjct: 273 FTAG----LSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 51/289 (17%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
LG+G +G + R +A K + ++ I EV ++ L+ Q + +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVXLLASLNHQYVVRYYA 69
Query: 135 GAYEDMRFVH------------IVMELCADGELFDRIIAKGHYSER-AAASVFRDIMHVV 181
E FV I E C + L+D I ++ +R +FR I+ +
Sbjct: 70 AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 182 NVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI----------- 230
+ H++G++HR+LKP N DE+ +K+ DFG + V+R +
Sbjct: 130 SYIHSQGIIHRNLKPXNIFI---DESRNVKIGDFGLA-----KNVHRSLDILKLDSQNLP 181
Query: 231 ---------VGSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK-GIF 278
+G+A YVA EVL Y ++ID +S G+I + + PF E+ I
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF---EXIYPFSTGXERVNIL 238
Query: 279 DAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWL 327
+ +I+F K ++R ++ DP KR A +L WL
Sbjct: 239 KKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 131/307 (42%), Gaps = 65/307 (21%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G G+++ +G A K + + R+ I RE+Q++ H P IV F
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 131
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG----- 188
GA+ + I ME DG D+++ K A + I+ V++ KG
Sbjct: 132 YGAFYSDGEISICMEH-MDGGSLDQVLKK-------AGRIPEQILGKVSIAVIKGLTYLR 183
Query: 189 ----VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR- 243
++HRD+KP N L S E +K+ DFG S + + VG+ Y++PE L+
Sbjct: 184 EKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQG 239
Query: 244 RRYGKEIDIWSAGVILYILLSG---VPPFWAETEKGIFDAILQGN--------------- 285
Y + DIWS G+ L + G +PP A+ + +F ++G+
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 299
Query: 286 ----------------IDF-DSAPWPTISSGA-----KDLVRRMLTQDPKKRITAAEVLE 323
+D+ + P P + S +D V + L ++P +R +++
Sbjct: 300 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMV 359
Query: 324 HPWLKES 330
H ++K S
Sbjct: 360 HAFIKRS 366
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 18/265 (6%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
E+GRG + +Y ++ T + A + RKL +K++R K E + ++ L PNIV F
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEXLKGLQ-HPNIVRF 90
Query: 134 KGAYEDM----RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG- 188
++E + + +V EL G L + + S R I+ + HT+
Sbjct: 91 YDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTP 150
Query: 189 -VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRYG 247
++HRDLK +N T +K+ D G + + + ++G+ + APE +Y
Sbjct: 151 PIIHRDLKCDNIFITG--PTGSVKIGDLGLATL-KRASFAKAVIGTPEFXAPEXYEEKYD 207
Query: 248 KEIDIWSAG-VILYILLSGVPPFWAETEKGIFDAILQG--NIDFDSAPWPTISSGAKDLV 304
+ +D+++ G L S P + I+ + G FD P + K+++
Sbjct: 208 ESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV----KEII 263
Query: 305 RRMLTQDPKKRITAAEVLEHPWLKE 329
+ Q+ +R + ++L H + +E
Sbjct: 264 EGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 124/259 (47%), Gaps = 28/259 (10%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
+GRG +G++ ++ K VA +++ S+++R E++ + ++ PNIV+
Sbjct: 17 VGRGAFGVV-------CKAKWRAKDVAIKQIESESERKAFIVELRQLSRVN-HPNIVKLY 68
Query: 135 GAYEDMRFVHIVMELCADGELFDRIIAK---GHYSERAAASVFRDIMHVVNVCHT---KG 188
GA + V +VME G L++ + +Y+ A S V H+ K
Sbjct: 69 GAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
++HRDLKP N L + ++K+ DFG + + GSA ++APEV Y
Sbjct: 127 LIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYS 182
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK---DLV 304
++ D++S G+IL+ +++ PF E G + + + P P I + K L+
Sbjct: 183 EKCDVFSWGIILWEVITRRKPF---DEIGGPAFRIMWAVHNGTRP-PLIKNLPKPIESLM 238
Query: 305 RRMLTQDPKKRITAAEVLE 323
R ++DP +R + E+++
Sbjct: 239 TRCWSKDPSQRPSMEEIVK 257
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 124/259 (47%), Gaps = 28/259 (10%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
+GRG +G++ ++ K VA +++ S+++R E++ + ++ PNIV+
Sbjct: 16 VGRGAFGVV-------CKAKWRAKDVAIKQIESESERKAFIVELRQLSRVN-HPNIVKLY 67
Query: 135 GAYEDMRFVHIVMELCADGELFDRIIAK---GHYSERAAASVFRDIMHVVNVCHT---KG 188
GA + V +VME G L++ + +Y+ A S V H+ K
Sbjct: 68 GAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 189 VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR-RRYG 247
++HRDLKP N L + ++K+ DFG + + GSA ++APEV Y
Sbjct: 126 LIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYS 181
Query: 248 KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAK---DLV 304
++ D++S G+IL+ +++ PF E G + + + P P I + K L+
Sbjct: 182 EKCDVFSWGIILWEVITRRKPF---DEIGGPAFRIMWAVHNGTRP-PLIKNLPKPIESLM 237
Query: 305 RRMLTQDPKKRITAAEVLE 323
R ++DP +R + E+++
Sbjct: 238 TRCWSKDPSQRPSMEEIVK 256
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 49/257 (19%)
Query: 44 FSGPEPLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKR 103
F P LP++ + +E +++ GK LG G +G + G++ A VA +
Sbjct: 29 FIDPTQLPYN------EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 104 KLVSKTDRDD---IKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRII 160
L S D+ + E++IM HL NIV GA V ++ E C G+L + +
Sbjct: 83 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 161 AKGHYSERAAASVF-------RDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDE 206
K E A RD++H + +K +HRD+ N L T+
Sbjct: 143 RKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH- 201
Query: 207 NAIMKVTDFGFSFFFEEGKVYRDIVGSAYYV------------APE-VLRRRYGKEIDIW 253
+ K+ DFG + RDI+ + Y+ APE + Y + D+W
Sbjct: 202 --VAKIGDFGLA---------RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVW 250
Query: 254 SAGVILYILLS-GVPPF 269
S G++L+ + S G+ P+
Sbjct: 251 SYGILLWEIFSLGLNPY 267
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 49/257 (19%)
Query: 44 FSGPEPLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKR 103
F P LP++ + +E +++ GK LG G +G + G++ A VA +
Sbjct: 29 FIDPTQLPYN------EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 104 KLVSKTDRDD---IKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRII 160
L S D+ + E++IM HL NIV GA V ++ E C G+L + +
Sbjct: 83 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 161 AKGHYSERAAASVF-------RDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDE 206
K E A RD++H + +K +HRD+ N L T+
Sbjct: 143 RKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH- 201
Query: 207 NAIMKVTDFGFSFFFEEGKVYRDIVGSAYYV------------APE-VLRRRYGKEIDIW 253
+ K+ DFG + RDI+ + Y+ APE + Y + D+W
Sbjct: 202 --VAKIGDFGLA---------RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVW 250
Query: 254 SAGVILYILLS-GVPPF 269
S G++L+ + S G+ P+
Sbjct: 251 SYGILLWEIFSLGLNPY 267
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E I + K F D D G +S EL + LG T+ ++ ++ D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 427 DYIEFITATMQRHKLE----RFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATI 482
D+ EF+ +++ K + E L F+ FDK+ G+I ++EL + G+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT--GEHVIE 131
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMMK 510
I+++M + D++ DGRI +DEF MM+
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 288 FDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIFRMK 347
FD+ IS+ V RML Q+P K A + E + E G + ID +
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE---VDEDGSGT---ID------FE 76
Query: 348 QFRAMNKLKKLALKVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLT 407
+F M ++ + E+ + ++L F D + +G + +EL L G +
Sbjct: 77 EFLVM------MVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVI 130
Query: 408 ESDIKQYMQAADIDGNGTIDYIEFI 432
E DI+ M+ +D + +G ID+ EF+
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 70 TMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK----REVQIMQHLS 125
+G+++GRG +G ++ +GR A ++ K +T D+K +E +I++ S
Sbjct: 117 VLGEQIGRGNFGEVF------SGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS 170
Query: 126 GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKG-HYSERAAASVFRDIMHVVNVC 184
PNIV G + ++IVMEL G+ + +G + + D +
Sbjct: 171 -HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 185 HTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVG----SAYYVAPE 240
+K +HRDL N L T E ++K++DFG S +G VY G + APE
Sbjct: 230 ESKCCIHRDLAARNCLVT---EKNVLKISDFGMSREEADG-VYAASGGLRQVPVKWTAPE 285
Query: 241 VLRR-RYGKEIDIWSAGVILYILLS-GVPPF 269
L RY E D+WS G++L+ S G P+
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 45/253 (17%)
Query: 44 FSGPEPLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKR 103
F P LP++ + +E +++ GK LG G +G + G++ A VA +
Sbjct: 29 FIDPTQLPYN------EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 104 KLVSKTDRDD---IKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRII 160
L S D+ + E++IM HL NIV GA V ++ E C G+L + +
Sbjct: 83 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 161 AKGHY---SERAAASVFRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENAIM 210
K E RD++H + +K +HRD+ N L T+ +
Sbjct: 143 RKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VA 199
Query: 211 KVTDFGFSFFFEEGKVYRDIVGSAYYV------------APE-VLRRRYGKEIDIWSAGV 257
K+ DFG + RDI+ + Y+ APE + Y + D+WS G+
Sbjct: 200 KIGDFGLA---------RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 250
Query: 258 ILYILLS-GVPPF 269
+L+ + S G+ P+
Sbjct: 251 LLWEIFSLGLNPY 263
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E+I + K+ F + D + G ++ EL + LG TE++++ + A+ + NG +
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 427 DYIEFI-TATMQRHKLERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATI 485
++ EF Q + + E + +AF+ FD+D G+I+ EL F N+G+ T I
Sbjct: 64 NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAEL--RFVMINLGEKVTDEEI 121
Query: 486 KEIMSEVDRDKDGRISYDEFRAMM 509
E++ E D D DG I+Y+EF M+
Sbjct: 122 DEMIREADFDGDGMINYEEFVWMI 145
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 373 QKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFI 432
++++E F D D +G +S EL+ + LG +T+ +I + ++ AD DG+G I+Y EF+
Sbjct: 83 EEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFV 142
Query: 433 TATMQR 438
Q+
Sbjct: 143 WMISQK 148
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 45/253 (17%)
Query: 44 FSGPEPLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKR 103
F P LP++ + +E +++ GK LG G +G + G++ A VA +
Sbjct: 21 FIDPTQLPYN------EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 74
Query: 104 KLVSKTDRDD---IKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRII 160
L S D+ + E++IM HL NIV GA V ++ E C G+L + +
Sbjct: 75 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 134
Query: 161 AKGHY---SERAAASVFRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENAIM 210
K E RD++H + +K +HRD+ N L T+ +
Sbjct: 135 RKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VA 191
Query: 211 KVTDFGFSFFFEEGKVYRDIVGSAYYV------------APE-VLRRRYGKEIDIWSAGV 257
K+ DFG + RDI+ + Y+ APE + Y + D+WS G+
Sbjct: 192 KIGDFGLA---------RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 242
Query: 258 ILYILLS-GVPPF 269
+L+ + S G+ P+
Sbjct: 243 LLWEIFSLGLNPY 255
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 19/267 (7%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL-VSKTDRDDIKREVQIMQHLS 125
S+ + + +G G++G + + G++ +C ++ K ++ R + E IM
Sbjct: 16 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE 75
Query: 126 GQPNIVEFKGAYEDMRFVHIVMELCADGEL--FDRIIAKGHYSERAAASVFRDIMHVVNV 183
PNI+ +G + V I+ E +G L F R+ G ++ + R I +
Sbjct: 76 -HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRY 133
Query: 184 CHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA------YYV 237
VHRDL N L SN + KV+DFG S F EE S +
Sbjct: 134 LAEMSYVHRDLAARNILVNSN---LVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 238 APEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGNIDFDSAPWPT 295
APE + R++ D WS G++++ ++S G P+W + + + +AI Q D+ P P
Sbjct: 191 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ---DYRLPPPPD 247
Query: 296 ISSGAKDLVRRMLTQDPKKRITAAEVL 322
+ L+ +D R +V+
Sbjct: 248 CPTSLHQLMLDCWQKDRNARPRFPQVV 274
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 89/188 (47%), Gaps = 38/188 (20%)
Query: 176 DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY 235
+++ ++ CH+KG++HRD+KP N + + + +++ D+G + F+ + Y V S Y
Sbjct: 145 ELLKALDYCHSKGIMHRDVKPHNVMI--DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRY 202
Query: 236 YVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE--------------KGIFD 279
+ PE+L + Y +D+WS G +L ++ PF+ + + ++
Sbjct: 203 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYG 262
Query: 280 AILQGNIDFDS-----------APWPT---------ISSGAKDLVRRMLTQDPKKRITAA 319
+ + +ID D W +S A DL+ ++L D ++R+TA
Sbjct: 263 YLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK 322
Query: 320 EVLEHPWL 327
E +EHP+
Sbjct: 323 EAMEHPYF 330
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 23/256 (8%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKR--EVQIMQHLSGQPNIVE 132
LGRG +G ++ + TG Q A K V R ++ R E+ LS P IV
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV----------RLEVFRVEELVACAGLS-SPRIVP 128
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
GA + +V+I MEL G L I G E A + + HT+ ++H
Sbjct: 129 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 188
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV------GSAYYVAPE-VLRRR 245
D+K +N L +S+ A + DFG + + + + ++ G+ ++APE V+ +
Sbjct: 189 DVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 246 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
++DIWS+ ++ +L+G P W + +G + P+ + ++
Sbjct: 247 CDAKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQ 305
Query: 306 RMLTQDPKKRITAAEV 321
L ++P R +A E+
Sbjct: 306 EGLRKEPVHRASAMEL 321
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 363 IVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDG 422
+ + +EI++L ++F ++D DN+G+LS +E + L + +++ + D DG
Sbjct: 10 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDG 65
Query: 423 NGTIDYIEFITATMQRH-KLERFEHLYKAFQYFDKDNSGYITVDELETAFKEY---NMGD 478
NG +D+ EFI Q K ++ + L AF+ +D D GYI+ EL K N+ D
Sbjct: 66 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 125
Query: 479 DATIATIKEIMSEVDRDKDGRISYDEFRAMM 509
+ + + D+D DGRIS++EF A++
Sbjct: 126 TQLQQIVDKTIINADKDGDGRISFEEFCAVV 156
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 70 TMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIK----REVQIMQHLS 125
+G+++GRG +G ++ +GR A ++ K +T D+K +E +I++ S
Sbjct: 117 VLGEQIGRGNFGEVF------SGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS 170
Query: 126 GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKG-HYSERAAASVFRDIMHVVNVC 184
PNIV G + ++IVMEL G+ + +G + + D +
Sbjct: 171 -HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 185 HTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGS-----AYYVAP 239
+K +HRDL N L T E ++K++DFG S EE G + AP
Sbjct: 230 ESKCCIHRDLAARNCLVT---EKNVLKISDFGMSR--EEADGVXAASGGLRQVPVKWTAP 284
Query: 240 EVLRR-RYGKEIDIWSAGVILYILLS-GVPPF 269
E L RY E D+WS G++L+ S G P+
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 363 IVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDG 422
+ + +EI++L ++F ++D DN+G+LS +E + L + +++ + D DG
Sbjct: 11 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDG 66
Query: 423 NGTIDYIEFITATMQRH-KLERFEHLYKAFQYFDKDNSGYITVDELETAFKEY---NMGD 478
NG +D+ EFI Q K ++ + L AF+ +D D GYI+ EL K N+ D
Sbjct: 67 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 126
Query: 479 DATIATIKEIMSEVDRDKDGRISYDEFRAMM 509
+ + + D+D DGRIS++EF A++
Sbjct: 127 TQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
+ +EI++L ++F ++D DN+G+LS +E + L + +++ + D DGNG +
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDGNGEV 56
Query: 427 DYIEFITATMQRH-KLERFEHLYKAFQYFDKDNSGYITVDELETAFKEY---NMGDDATI 482
D+ EFI Q K ++ + L AF+ +D D GYI+ EL K N+ D
Sbjct: 57 DFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQ 116
Query: 483 ATIKEIMSEVDRDKDGRISYDEFRAMM 509
+ + + D+D DGRIS++EF A++
Sbjct: 117 QIVDKTIINADKDGDGRISFEEFCAVV 143
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 111/261 (42%), Gaps = 55/261 (21%)
Query: 44 FSGPEPLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKR 103
F P LP++ + +E +++ GK LG G +G + G++ A VA +
Sbjct: 29 FIDPTQLPYN------EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 104 KLVSKTDRDD---IKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRII 160
L S D+ + E++IM HL NIV GA V ++ E C G+L + +
Sbjct: 83 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 161 AK-----------GHYSERAAASVFRDIMHV-------VNVCHTKGVVHRDLKPENFLFT 202
K H E +S RD++H + +K +HRD+ N L T
Sbjct: 143 RKRPPGLEYSYNPSHNPEEQLSS--RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 200
Query: 203 SNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYV------------APE-VLRRRYGKE 249
+ + K+ DFG + RDI+ + Y+ APE + Y +
Sbjct: 201 NGH---VAKIGDFGLA---------RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 248
Query: 250 IDIWSAGVILYILLS-GVPPF 269
D+WS G++L+ + S G+ P+
Sbjct: 249 SDVWSYGILLWEIFSLGLNPY 269
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 14/219 (6%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKL-VSKTDRDDIKREVQIMQHLSGQPNIVEF 133
+G G++G + G++ ++ K+ ++ R D E IM PN+V
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFD-HPNVVHL 109
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDIMHVVNVCHTKGVVH 191
+G + V IV+E +G L D + K G ++ + R I + G VH
Sbjct: 110 EGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVH 168
Query: 192 RDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG--KVYRDIVG--SAYYVAPEVLR-RRY 246
RDL N L S N + KV+DFG S E+ VY G + APE ++ R++
Sbjct: 169 RDLAARNILVNS---NLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
Query: 247 GKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
D+WS G++++ ++S G P+W + + + AI +G
Sbjct: 226 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 264
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 105/242 (43%), Gaps = 44/242 (18%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL----------VSKTDRDDIKR 116
S T+ + +G G++G E +GR K KR+L ++ R D
Sbjct: 22 SCITIERVIGAGEFG------EVCSGR---LKLPGKRELPVAIKTLKVGYTEKQRRDFLG 72
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVF 174
E IM PNI+ +G + V IV E +G L D + K G ++ +
Sbjct: 73 EASIMGQFD-HPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGML 130
Query: 175 RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA 234
R I + G VHRDL N L S N + KV+DFG S +V D +A
Sbjct: 131 RGISAGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLS------RVLEDDPEAA 181
Query: 235 Y----------YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAIL 282
Y + APE + R++ D+WS G++++ ++S G P+W T + + A+
Sbjct: 182 YTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVE 241
Query: 283 QG 284
+G
Sbjct: 242 EG 243
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 21/266 (7%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELGRG YG++ +G+ A K + R V+ ++ + ++ I P V F
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 134 KGAYEDMRFVHIVMEL--CADGELFDRIIAKGH-YSERAAASVFRDIMHVVNVCHTK-GV 189
GA V I MEL + + + ++I KG E + I+ + H+K V
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI-VGSAYYVAPEVL-----R 243
+HRD+KP N L + + +K+ DFG S + + V +DI G Y+APE + +
Sbjct: 132 IHRDVKPSNVLINALGQ---VKMCDFGISGYLVD-DVAKDIDAGCKPYMAPERINPELNQ 187
Query: 244 RRYGKEIDIWSAGVILYILLSGVPPF--WAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
+ Y + DIWS G+ + L P+ W + + + + + P S+
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL---PADKFSAEFV 244
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWL 327
D + L ++ K+R T E+++HP+
Sbjct: 245 DFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 19/265 (7%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELGRG YG++ +G+ A K + R V+ ++ + ++ I P V F
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 115
Query: 134 KGAYEDMRFVHIVMEL--CADGELFDRIIAKGH-YSERAAASVFRDIMHVVNVCHTK-GV 189
GA V I MEL + + + ++I KG E + I+ + H+K V
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 175
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVL-----RR 244
+HRD+KP N L + + +K+ DFG S + + G Y+APE + ++
Sbjct: 176 IHRDVKPSNVLINALGQ---VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 232
Query: 245 RYGKEIDIWSAGVILYILLSGVPPF--WAETEKGIFDAILQGNIDFDSAPWPTISSGAKD 302
Y + DIWS G+ + L P+ W + + + + + P S+ D
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL---PADKFSAEFVD 289
Query: 303 LVRRMLTQDPKKRITAAEVLEHPWL 327
+ L ++ K+R T E+++HP+
Sbjct: 290 FTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT-DRDDIKREVQIMQHLS 125
S T +E+G GQ+G+++L G VA + + + DD E ++M LS
Sbjct: 27 SELTFVQEIGSGQFGLVHL------GYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLS 80
Query: 126 GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIMHVVNVC 184
P +V+ G + + +V E G L D + +G ++ + D+ +
Sbjct: 81 -HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 139
Query: 185 HTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---YVAPEV 241
V+HRDL N L EN ++KV+DFG + F + + Y G+ + + +PEV
Sbjct: 140 EEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEV 195
Query: 242 LR-RRYGKEIDIWSAGVILYILLS 264
RY + D+WS GV+++ + S
Sbjct: 196 FSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 369 TEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDY 428
+EI++L ++F ++D DN+G+LS +E + L + +++ + D DGNG +D+
Sbjct: 2 ADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDGNGEVDF 57
Query: 429 IEFITATMQRH-KLERFEHLYKAFQYFDKDNSGYITVDELETAFKEY---NMGDDATIAT 484
EFI Q K ++ + L AF+ +D D GYI+ EL K N+ D
Sbjct: 58 KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQI 117
Query: 485 IKEIMSEVDRDKDGRISYDEFRAMM 509
+ + + D+D DGRIS++EF A++
Sbjct: 118 VDKTIINADKDGDGRISFEEFCAVV 142
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 129/297 (43%), Gaps = 59/297 (19%)
Query: 52 HSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDR 111
H+ D G +++++ +G G +G ++ G+ + K V K +
Sbjct: 3 HTVDKRFGMDFKEIEL-------IGSGGFGQVFKAKHRIDGKTYVIKRV-------KYNN 48
Query: 112 DDIKREVQIMQHLSGQPNIVEFKGAYEDMRF----------------VHIVMELCADGEL 155
+ +REV+ + L NIV + G ++ + + I ME C G L
Sbjct: 49 EKAEREVKALAKLD-HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTL 107
Query: 156 FDRIIAK-GHYSERAAA-SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVT 213
I + G ++ A +F I V+ H+K +++RDLKP N + +K+
Sbjct: 108 EQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ---VKIG 164
Query: 214 DFGF-SFFFEEGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLS------G 265
DFG + +GK R G+ Y++PE + + YGKE+D+++ G+IL LL
Sbjct: 165 DFGLVTSLKNDGKRXRS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE 223
Query: 266 VPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVL 322
F+ + GI I FD K L++++L++ P+ R +E+L
Sbjct: 224 TSKFFTDLRDGIISDI------FDKKE--------KTLLQKLLSKKPEDRPNTSEIL 266
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 107 SKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GH 164
++ R D E IM PN++ +G V I+ E +G L D + + G
Sbjct: 74 TEKQRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQ 131
Query: 165 YSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEE- 223
++ + R I + VHRDL N L SN + KV+DFG S F E+
Sbjct: 132 FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSN---LVCKVSDFGLSRFLEDD 188
Query: 224 --GKVYRDIVGSAY---YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKG 276
Y +G + APE ++ R++ D+WS G++++ ++S G P+W T +
Sbjct: 189 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD 248
Query: 277 IFDAILQ 283
+ +AI Q
Sbjct: 249 VINAIEQ 255
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 72 GKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD------RDDIKREVQIMQHLS 125
G + G G +G++Y N+T +VA +KL + D + +E+++
Sbjct: 27 GNKXGEGGFGVVYKGYVNNT-------TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQ 79
Query: 126 GQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIA---KGHYSERAAASVFRDIMHVVN 182
+ N+VE G D + +V +G L DR+ S + + + +N
Sbjct: 80 HE-NLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGIN 138
Query: 183 VCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGF---SFFFEEGKVYRDIVGSAYYVAP 239
H +HRD+K N L DE K++DFG S F + IVG+ Y AP
Sbjct: 139 FLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
Query: 240 EVLRRRYGKEIDIWSAGVILYILLSGVP 267
E LR + DI+S GV+L +++G+P
Sbjct: 196 EALRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 27/273 (9%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVA--KRKLVSKTDRDDIKREVQIMQHL 124
+ T+ + +G G +G +Y G + A K+ + +S+T +++++E ++ L
Sbjct: 7 AELTLEEIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQT-IENVRQEAKLFAML 63
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVC 184
PNI+ +G + +VME G L +R+++ + I +N
Sbjct: 64 K-HPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYL 121
Query: 185 HTKGVV---HRDLKPENFLFTSNDENA-----IMKVTDFGFSFFFEEGKVYRDIVGSAY- 235
H + +V HRDLK N L EN I+K+TDFG + E + + AY
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTKMSAAGAYA 179
Query: 236 YVAPEVLR-RRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWP 294
++APEV+R + K D+WS GV+L+ LL+G PF +GI + + + P
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF-----RGIDGLAVAYGVAMNKLALP 234
Query: 295 TISSGAKDLVRRM---LTQDPKKRITAAEVLEH 324
S+ + + M DP R + +L+
Sbjct: 235 IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 23/256 (8%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKR--EVQIMQHLSGQPNIVE 132
+GRG +G ++ + TG Q A K V R ++ R E+ LS P IV
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV----------RLEVFRVEELVACAGLS-SPRIVP 130
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
GA + +V+I MEL G L I G E A + + HT+ ++H
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 190
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV------GSAYYVAPE-VLRRR 245
D+K +N L +S+ A + DFG + + + + ++ G+ ++APE V+ +
Sbjct: 191 DVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 248
Query: 246 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
++DIWS+ ++ +L+G P W + +G + P+ + ++
Sbjct: 249 CDAKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQ 307
Query: 306 RMLTQDPKKRITAAEV 321
L ++P R +A E+
Sbjct: 308 EGLRKEPVHRASAMEL 323
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 23/256 (8%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKR--EVQIMQHLSGQPNIVE 132
+GRG +G ++ + TG Q A K V R ++ R E+ LS P IV
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV----------RLEVFRVEELVACAGLS-SPRIVP 114
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
GA + +V+I MEL G L I G E A + + HT+ ++H
Sbjct: 115 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 174
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV------GSAYYVAPE-VLRRR 245
D+K +N L +S+ A + DFG + + + + ++ G+ ++APE V+ +
Sbjct: 175 DVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 246 YGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVR 305
++DIWS+ ++ +L+G P W + +G + P+ + ++
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQ 291
Query: 306 RMLTQDPKKRITAAEV 321
L ++P R +A E+
Sbjct: 292 EGLRKEPVHRASAMEL 307
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 43/253 (16%)
Query: 121 MQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+Q+L G PNIV+ D + ++ E + + Y R +++
Sbjct: 100 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIR---YYIYELL 156
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
++ CH++G++HRD+KP N + + E +++ D+G + F+ GK Y V S Y+
Sbjct: 157 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 214
Query: 239 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 282
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 215 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLN 274
Query: 283 QGNIDFDSA-----------PW---------PTISSGAKDLVRRMLTQDPKKRITAAEVL 322
+ I+ D PW +S A D + ++L D ++R+TA E +
Sbjct: 275 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 334
Query: 323 EHPWLKESGKASD 335
HP+ ++ A +
Sbjct: 335 THPYFQQVRAAEN 347
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 83/166 (50%), Gaps = 13/166 (7%)
Query: 112 DDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRII----AKGHYSE 167
++ REV IM+ L PNIV F GA + IV E + G L+ R++ A+ E
Sbjct: 79 NEFLREVAIMKRLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDE 136
Query: 168 RAAASVFRDIMHVVNVCHTKG--VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGK 225
R S+ D+ +N H + +VHRDLK N L D+ +KV DFG S
Sbjct: 137 RRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLV---DKKYTVKVCDFGLSRLKASXF 193
Query: 226 VY-RDIVGSAYYVAPEVLRRRYGKE-IDIWSAGVILYILLSGVPPF 269
+ + G+ ++APEVLR E D++S GVIL+ L + P+
Sbjct: 194 LXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 28/218 (12%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G G++ +G A K + + R+ I RE+Q++ H P IV F
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHLE--IKPAIRNQIIRELQVL-HECNSPYIVGF 79
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKG----- 188
GA+ + I ME DG D+++ + A + +I+ V++ +G
Sbjct: 80 YGAFYSDGEISICME-HMDGGSLDQVL-------KEAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 189 ----VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVAPEVLR- 243
++HRD+KP N L S E +K+ DFG S + + VG+ Y+APE L+
Sbjct: 132 EKHQIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMAPERLQG 187
Query: 244 RRYGKEIDIWSAGVILYILLSG---VPPFWAETEKGIF 278
Y + DIWS G+ L L G +PP A+ + IF
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIF 225
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 43/253 (16%)
Query: 121 MQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+Q+L G PNIV+ D + ++ E + D + ++ +++
Sbjct: 81 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 137
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
++ CH++G++HRD+KP N + + E +++ D+G + F+ GK Y V S Y+
Sbjct: 138 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 195
Query: 239 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 282
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 196 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 255
Query: 283 QGNIDFDSA-----------PW---------PTISSGAKDLVRRMLTQDPKKRITAAEVL 322
+ I+ D PW +S A D + ++L D ++R+TA E +
Sbjct: 256 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 315
Query: 323 EHPWLKESGKASD 335
HP+ ++ A +
Sbjct: 316 THPYFQQVRAAEN 328
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 43/253 (16%)
Query: 121 MQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+Q+L G PNIV+ D + ++ E + D + ++ +++
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 135
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
++ CH++G++HRD+KP N + + E +++ D+G + F+ GK Y V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 239 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 282
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 283 QGNIDFDSA-----------PW---------PTISSGAKDLVRRMLTQDPKKRITAAEVL 322
+ I+ D PW +S A D + ++L D ++R+TA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 323 EHPWLKESGKASD 335
HP+ ++ A +
Sbjct: 314 THPYFQQVRAAEN 326
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 43/253 (16%)
Query: 121 MQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+Q+L G PNIV+ D + ++ E + D + ++ +++
Sbjct: 80 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 136
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
++ CH++G++HRD+KP N + + E +++ D+G + F+ GK Y V S Y+
Sbjct: 137 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 194
Query: 239 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 282
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 254
Query: 283 QGNIDFDSA-----------PW---------PTISSGAKDLVRRMLTQDPKKRITAAEVL 322
+ I+ D PW +S A D + ++L D ++R+TA E +
Sbjct: 255 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 323 EHPWLKESGKASD 335
HP+ ++ A +
Sbjct: 315 THPYFQQVRAAEN 327
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 43/253 (16%)
Query: 121 MQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+Q+L G PNIV+ D + ++ E + D + ++ +++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 135
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
++ CH++G++HRD+KP N + + E +++ D+G + F+ GK Y V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 239 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 282
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 283 QGNIDFDSA-----------PW---------PTISSGAKDLVRRMLTQDPKKRITAAEVL 322
+ I+ D PW +S A D + ++L D ++R+TA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 323 EHPWLKESGKASD 335
HP+ ++ A +
Sbjct: 314 THPYFQQVRAAEN 326
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 43/253 (16%)
Query: 121 MQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+Q+L G PNIV+ D + ++ E + D + ++ +++
Sbjct: 80 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 136
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
++ CH++G++HRD+KP N + + E +++ D+G + F+ GK Y V S Y+
Sbjct: 137 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 194
Query: 239 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 282
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 254
Query: 283 QGNIDFDSA-----------PW---------PTISSGAKDLVRRMLTQDPKKRITAAEVL 322
+ I+ D PW +S A D + ++L D ++R+TA E +
Sbjct: 255 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 323 EHPWLKESGKASD 335
HP+ ++ A +
Sbjct: 315 THPYFQQVRAAEN 327
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 43/253 (16%)
Query: 121 MQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+Q+L G PNIV+ D + ++ E + D + ++ +++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 135
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
++ CH++G++HRD+KP N + + E +++ D+G + F+ GK Y V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 239 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 282
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 283 QGNIDFDSA-----------PW---------PTISSGAKDLVRRMLTQDPKKRITAAEVL 322
+ I+ D PW +S A D + ++L D ++R+TA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 323 EHPWLKESGKASD 335
HP+ ++ A +
Sbjct: 314 THPYFQQVRAAEN 326
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD------DIKREVQI 120
S T +E+G GQ+G+++L + K K+ KT R+ D E ++
Sbjct: 7 SELTFVQEIGSGQFGLVHLGY-----------WLNKDKVAIKTIREGAMSEEDFIEEAEV 55
Query: 121 MQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIMH 179
M LS P +V+ G + + +V E G L D + +G ++ + D+
Sbjct: 56 MMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 114
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ V+HRDL N L EN ++KV+DFG + F + + Y G+ + +
Sbjct: 115 GMAYLEEASVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKW 170
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILYILLS 264
+PEV RY + D+WS GV+++ + S
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 43/253 (16%)
Query: 121 MQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+Q+L G PNIV+ D + ++ E + D + ++ +++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 135
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
++ CH++G++HRD+KP N + + E +++ D+G + F+ GK Y V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 239 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 282
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 283 QGNIDFDSA-----------PW---------PTISSGAKDLVRRMLTQDPKKRITAAEVL 322
+ I+ D PW +S A D + ++L D ++R+TA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 323 EHPWLKESGKASD 335
HP+ ++ A +
Sbjct: 314 THPYFQQVRAAEN 326
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 39/233 (16%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V +Y + +GRG YG +YL + + + A K V R D I RE+ I+ L
Sbjct: 26 VPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKV-NRMFEDLIDCKRILREITILNRL 84
Query: 125 SGQPNIVEFKGAY--EDM-RF--VHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
I+ ED+ +F ++IV+E+ AD +L +E+ ++ +++
Sbjct: 85 KSD-YIIRLHDLIIPEDLLKFDELYIVLEI-ADSDLKKLFKTPIFLTEQHVKTILYNLLL 142
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGK---VYRDI------ 230
H G++HRDLKP N L +++ +K+ DFG + K + D+
Sbjct: 143 GEKFIHESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDKDIHIVNDLEEKEEN 199
Query: 231 -----------------VGSAYYVAPEV--LRRRYGKEIDIWSAGVILYILLS 264
V + +Y APE+ L+ Y IDIWS G I LL+
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 290 SAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKAS 334
S + +IS DL+ ML + +KRIT + L HP+LK+ K +
Sbjct: 333 SKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKEN 377
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 38/239 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGR-QFACK---SVAKRKL---VSKTDRDDIKREVQ 119
++ ++ K +G G++G E +GR + K SVA + L ++ R D E
Sbjct: 45 TNISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDI 177
IM PNI+ +G + V IV E +G L D + K ++ + R I
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY-- 235
+ G VHRDL N L S N + KV+DFG S +V D +AY
Sbjct: 157 ASGMKYLSDMGAVHRDLAARNILINS---NLVCKVSDFGLS------RVLEDDPEAAYTT 207
Query: 236 --------YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 38/239 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGR-QFACK---SVAKRKL---VSKTDRDDIKREVQ 119
++ ++ K +G G++G E +GR + K SVA + L ++ R D E
Sbjct: 45 TNISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDI 177
IM PNI+ +G + V IV E +G L D + K ++ + R I
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY-- 235
+ G VHRDL N L S N + KV+DFG G+V D +AY
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGL------GRVLEDDPEAAYTT 207
Query: 236 --------YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 109/251 (43%), Gaps = 43/251 (17%)
Query: 121 MQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+Q+L G PNIV+ D + ++ E + D + ++ +++
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 135
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
++ CH++G++HRD+KP N + + E +++ D+G + F+ GK Y V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 239 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 282
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 283 QGNIDFDSA-----------PW---------PTISSGAKDLVRRMLTQDPKKRITAAEVL 322
+ I+ D PW +S A D + ++L D ++R+TA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 323 EHPWLKESGKA 333
HP+ ++ A
Sbjct: 314 THPYFQQVRAA 324
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 43/253 (16%)
Query: 121 MQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIM 178
+Q+L G PNIV+ D + ++ E + D + ++ +++
Sbjct: 79 LQNLMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 135
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYVA 238
++ CH++G++HRD+KP N + + E +++ D+G + F+ GK Y V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 239 PEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETEK--------------GIFDAIL 282
PE+L + Y +D+WS G + ++ PF+ + G+ +
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 283 QGNIDFDSA-----------PW---------PTISSGAKDLVRRMLTQDPKKRITAAEVL 322
+ I+ D PW +S A D + ++L D ++R+TA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 323 EHPWLKESGKASD 335
HP+ ++ A +
Sbjct: 314 THPYFQQVRAAEN 326
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 137/338 (40%), Gaps = 80/338 (23%)
Query: 72 GKELGRGQYGIIYLCIENSTGRQ--FACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPN 129
G ++GRG YG +Y +A K + + RE+ +++ L PN
Sbjct: 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA-----CREIALLRELK-HPN 79
Query: 130 IVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERA-----------AASVFRD 176
++ + + R V ++ + A+ +L+ I K H + +A S+
Sbjct: 80 VISLQKVFLSHADRKVWLLFDY-AEHDLWH--IIKFHRASKANKKPVQLPRGMVKSLLYQ 136
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTS-NDENAIMKVTDFGFSFFFEEG-KVYRD---IV 231
I+ ++ H V+HRDLKP N L E +K+ D GF+ F K D +V
Sbjct: 137 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVV 196
Query: 232 GSAYYVAPEVL--RRRYGKEIDIWSAGVILYILLSGVPPFWAETE-------------KG 276
+ +Y APE+L R Y K IDIW+ G I LL+ P F E
Sbjct: 197 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256
Query: 277 IFDAI-LQGNIDF-DSAPWPTISSGAKD----------------------------LVRR 306
IF+ + + D+ D P S+ KD L+++
Sbjct: 257 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQK 316
Query: 307 MLTQDPKKRITAAEVLEHPWLKESGKASDKPIDTAVIF 344
+LT DP KRIT+ + ++ P+ E P+ T+ +F
Sbjct: 317 LLTMDPIKRITSEQAMQDPYFLED------PLPTSDVF 348
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 26/227 (11%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKL-VSKTDRDDIKREVQIMQHLSGQPNIV 131
K +G G++G + G++ C ++ K + R D E IM PNI+
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 93
Query: 132 EFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDIMHVVNVCHTKGV 189
+G + V I+ E +G L D + K G ++ + R I +
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA 152
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY----------YVAP 239
VHRDL N L SN + KV+DFG S +V D +AY + AP
Sbjct: 153 VHRDLAARNILVNSN---LVCKVSDFGMS------RVLEDDPEAAYTTRGGKIPIRWTAP 203
Query: 240 EVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
E + R++ D+WS G++++ ++S G P+W + + + AI +G
Sbjct: 204 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 250
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD------DIKREVQI 120
S T +E+G GQ+G+++L + K K+ KT R+ D E ++
Sbjct: 5 SELTFVQEIGSGQFGLVHLGY-----------WLNKDKVAIKTIREGAMSEEDFIEEAEV 53
Query: 121 MQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIMH 179
M LS P +V+ G + + +V E G L D + +G ++ + D+
Sbjct: 54 MMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 112
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ V+HRDL N L EN ++KV+DFG + F + + Y G+ + +
Sbjct: 113 GMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKW 168
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILYILLS 264
+PEV RY + D+WS GV+++ + S
Sbjct: 169 ASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD------DIKREVQI 120
S T +E+G GQ+G+++L + K K+ KT R+ D E ++
Sbjct: 10 SELTFVQEIGSGQFGLVHLGY-----------WLNKDKVAIKTIREGAMSEEDFIEEAEV 58
Query: 121 MQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIMH 179
M LS P +V+ G + + +V E G L D + +G ++ + D+
Sbjct: 59 MMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 117
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ V+HRDL N L EN ++KV+DFG + F + + Y G+ + +
Sbjct: 118 GMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKW 173
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILYILLS 264
+PEV RY + D+WS GV+++ + S
Sbjct: 174 ASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 104/256 (40%), Gaps = 17/256 (6%)
Query: 40 PEAQFSGPEPLPHSPDTILGKPY--EDVKSHYTMGKELGRGQYG-IIYLCIENSTGRQFA 96
PE QF EP + G+ + E S + K +G G G + Y + R
Sbjct: 21 PEPQFYA-EPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVP 79
Query: 97 CKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGEL- 155
A + ++ R D E IM PNI+ +G R IV E +G L
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 156 -FDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTD 214
F R G ++ + R + + G VHRDL N L D N + KV+D
Sbjct: 139 TFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSD 194
Query: 215 FGFSFFFEE--GKVYRDIVG--SAYYVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPP 268
FG S E+ Y G + APE + R + D+WS GV+++ +L G P
Sbjct: 195 FGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
Query: 269 FWAETEKGIFDAILQG 284
+W T + + ++ +G
Sbjct: 255 YWNMTNRDVISSVEEG 270
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD------DIKREVQI 120
S T +E+G GQ+G+++L + K K+ KT R+ D E ++
Sbjct: 7 SELTFVQEIGSGQFGLVHLGY-----------WLNKDKVAIKTIREGAMSEEDFIEEAEV 55
Query: 121 MQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIMH 179
M LS P +V+ G + + +V E G L D + +G ++ + D+
Sbjct: 56 MMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 114
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ V+HRDL N L EN ++KV+DFG + F + + Y G+ + +
Sbjct: 115 GMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKW 170
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILYILLS 264
+PEV RY + D+WS GV+++ + S
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 18/222 (8%)
Query: 70 TMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT-DRDDIKREVQIMQHLSGQP 128
T KELG GQ+G++ G+ VA + + + D+ E ++M +LS +
Sbjct: 27 TFLKELGTGQFGVV------KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE- 79
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH-YSERAAASVFRDIMHVVNVCHTK 187
+V+ G R + I+ E A+G L + + H + + + +D+ + +K
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---YVAPEVLR- 243
+HRDL N L ND+ ++KV+DFG S + + + Y VGS + + PEVL
Sbjct: 140 QFLHRDLAARNCLV--NDQ-GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMY 195
Query: 244 RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
++ + DIW+ GV+++ + S G P+ T + I QG
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 109/266 (40%), Gaps = 58/266 (21%)
Query: 44 FSGPEPLPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKR 103
F P LP++ + +E +++ GK LG G +G + G++ A VA +
Sbjct: 14 FIDPTQLPYN------EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 67
Query: 104 KLVSKTDRDD---IKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRII 160
L S D+ + E++IM HL NIV GA V ++ E C G+L + +
Sbjct: 68 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 127
Query: 161 AK----------------GHYSERAAASVFRDIMHV-------VNVCHTKGVVHRDLKPE 197
K G E RD++H + +K +HRD+
Sbjct: 128 RKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 187
Query: 198 NFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAYYV------------APE-VLRR 244
N L T+ + K+ DFG + RDI+ + Y+ APE +
Sbjct: 188 NVLLTNGH---VAKIGDFGLA---------RDIMNDSNYIVKGNARLPVKWMAPESIFDC 235
Query: 245 RYGKEIDIWSAGVILYILLS-GVPPF 269
Y + D+WS G++L+ + S G+ P+
Sbjct: 236 VYTVQSDVWSYGILLWEIFSLGLNPY 261
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 38/239 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGR-QFACK---SVAKRKL---VSKTDRDDIKREVQ 119
++ ++ K +G G++G E +GR + K SVA + L ++ R D E
Sbjct: 45 TNISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDI 177
IM PNI+ +G + V IV E +G L D + K ++ + R I
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY-- 235
+ G VHRDL N L S N + KV+DFG S +V D +AY
Sbjct: 157 ASGMKYLSDMGFVHRDLAARNILINS---NLVCKVSDFGLS------RVLEDDPEAAYTT 207
Query: 236 --------YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD------DIKREVQI 120
S T +E+G GQ+G+++L + K K+ KT R+ D E ++
Sbjct: 8 SELTFVQEIGSGQFGLVHLGY-----------WLNKDKVAIKTIREGAMSEEDFIEEAEV 56
Query: 121 MQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIMH 179
M LS P +V+ G + + +V E G L D + +G ++ + D+
Sbjct: 57 MMKLS-HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 115
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ V+HRDL N L EN ++KV+DFG + F + + Y G+ + +
Sbjct: 116 GMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKW 171
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILYILLS 264
+PEV RY + D+WS GV+++ + S
Sbjct: 172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 366 NLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGT 425
NL E+I + KE F D DNNG++S EL + LG +E+++ M D+DGN
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 426 IDYIEFITATMQRHKLERFEH-LYKAFQYFDKDNSGYITVDELE 468
I++ EF+ ++ K E L +AF+ FDK+ G I+ EL+
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELK 106
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 442 ERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRIS 501
E+ +AF FDKDN+G I+ EL T + ++G + A + ++M+E+D D + +I
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMR--SLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 502 YDEFRAMM 509
+ EF A+M
Sbjct: 65 FSEFLALM 72
Score = 28.5 bits (62), Expect = 8.6, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 373 QKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIK 412
Q+L E F D + +G +S ELK L +G LT+++++
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 38/239 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGR-QFACK---SVAKRKL---VSKTDRDDIKREVQ 119
++ ++ K +G G++G E +GR + K SVA + L ++ R D E
Sbjct: 45 TNISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDI 177
IM PNI+ +G + V IV E +G L D + K ++ + R I
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY-- 235
+ G VHRDL N L S N + KV+DFG S +V D +AY
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLS------RVLEDDPEAAYTT 207
Query: 236 --------YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 13/166 (7%)
Query: 112 DDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRII----AKGHYSE 167
++ REV IM+ L PNIV F GA + IV E + G L+ R++ A+ E
Sbjct: 79 NEFLREVAIMKRLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDE 136
Query: 168 RAAASVFRDIMHVVNVCHTKG--VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGK 225
R S+ D+ +N H + +VHR+LK N L D+ +KV DFG S
Sbjct: 137 RRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGLSRLKASTF 193
Query: 226 V-YRDIVGSAYYVAPEVLRRRYGKE-IDIWSAGVILYILLSGVPPF 269
+ + G+ ++APEVLR E D++S GVIL+ L + P+
Sbjct: 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 38/239 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGR-QFACK---SVAKRKL---VSKTDRDDIKREVQ 119
++ ++ K +G G++G E +GR + K SVA + L ++ R D E
Sbjct: 16 TNISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDI 177
IM PNI+ +G + V IV E +G L D + K ++ + R I
Sbjct: 70 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 127
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY-- 235
+ G VHRDL N L S N + KV+DFG S +V D +AY
Sbjct: 128 ASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLS------RVLEDDPEAAYTT 178
Query: 236 --------YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 110/229 (48%), Gaps = 32/229 (13%)
Query: 59 GKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREV 118
G+PY+D + Y + ++LG G + ++L + A K V K+ ++ D+IK
Sbjct: 13 GEPYKDAR--YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIK--- 67
Query: 119 QIMQHLSGQPNIVE-FKGAYEDMRF-----------VHIVMELCADGELFDRIIAKGHYS 166
++Q ++ N E GA ++ VH+VM GE +I K Y
Sbjct: 68 -LLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK--YE 124
Query: 167 ERAAASVF-----RDIMHVVNVCHTK-GVVHRDLKPENFLFTSND--ENAI-MKVTDFGF 217
R ++ + ++ ++ H + G++H D+KPEN L D EN I +K+ D G
Sbjct: 125 HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGN 184
Query: 218 SFFFEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIWSAGVILYILLSG 265
+ +++E Y + + + Y +PEVL +G DIWS +++ L++G
Sbjct: 185 ACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWLKES 330
D + ML DP+KR A ++ HPWLK++
Sbjct: 312 DFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 110/229 (48%), Gaps = 32/229 (13%)
Query: 59 GKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREV 118
G+PY+D + Y + ++LG G + ++L + A K V K+ ++ D+IK
Sbjct: 13 GEPYKDAR--YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIK--- 67
Query: 119 QIMQHLSGQPNIVE-FKGAYEDMRF-----------VHIVMELCADGELFDRIIAKGHYS 166
++Q ++ N E GA ++ VH+VM GE +I K Y
Sbjct: 68 -LLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK--YE 124
Query: 167 ERAAASVF-----RDIMHVVNVCHTK-GVVHRDLKPENFLFTSND--ENAI-MKVTDFGF 217
R ++ + ++ ++ H + G++H D+KPEN L D EN I +K+ D G
Sbjct: 125 HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGN 184
Query: 218 SFFFEEGKVYRDIVGSAYYVAPEVLR-RRYGKEIDIWSAGVILYILLSG 265
+ +++E Y + + + Y +PEVL +G DIWS +++ L++G
Sbjct: 185 ACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWLKES 330
D + ML DP+KR A ++ HPWLK++
Sbjct: 312 DFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 18/222 (8%)
Query: 70 TMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT-DRDDIKREVQIMQHLSGQP 128
T KELG GQ+G++ G+ VA + + + D+ E ++M +LS +
Sbjct: 7 TFLKELGTGQFGVV------KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE- 59
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH-YSERAAASVFRDIMHVVNVCHTK 187
+V+ G R + I+ E A+G L + + H + + + +D+ + +K
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---YVAPEVLR- 243
+HRDL N L ND+ ++KV+DFG S + + + Y VGS + + PEVL
Sbjct: 120 QFLHRDLAARNCLV--NDQ-GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMY 175
Query: 244 RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
++ + DIW+ GV+++ + S G P+ T + I QG
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 217
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 18/222 (8%)
Query: 70 TMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT-DRDDIKREVQIMQHLSGQP 128
T KELG GQ+G++ G+ VA + + + D+ E ++M +LS +
Sbjct: 11 TFLKELGTGQFGVV------KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE- 63
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH-YSERAAASVFRDIMHVVNVCHTK 187
+V+ G R + I+ E A+G L + + H + + + +D+ + +K
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 123
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---YVAPEVLR- 243
+HRDL N L ND+ ++KV+DFG S + + + Y VGS + + PEVL
Sbjct: 124 QFLHRDLAARNCLV--NDQ-GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMY 179
Query: 244 RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
++ + DIW+ GV+++ + S G P+ T + I QG
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 221
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 38/239 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGR-QFACK---SVAKRKL---VSKTDRDDIKREVQ 119
++ ++ K +G G++G E +GR + K SVA + L ++ R D E
Sbjct: 45 TNISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDI 177
IM PNI+ +G + V IV E +G L D + K ++ + R I
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY-- 235
+ G VHRDL N L S N + KV+DFG S +V D +AY
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLS------RVLEDDPEAAYTT 207
Query: 236 --------YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 38/239 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGR-QFACK---SVAKRKL---VSKTDRDDIKREVQ 119
++ ++ K +G G++G E +GR + K SVA + L ++ R D E
Sbjct: 45 TNISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDI 177
IM PNI+ +G + V IV E +G L D + K ++ + R I
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY-- 235
+ G VHRDL N L S N + KV+DFG S +V D +AY
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLS------RVLEDDPEAAYTT 207
Query: 236 --------YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 38/239 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGR-QFACK---SVAKRKL---VSKTDRDDIKREVQ 119
++ ++ K +G G++G E +GR + K SVA + L ++ R D E
Sbjct: 45 TNISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDI 177
IM PNI+ +G + V IV E +G L D + K ++ + R I
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY-- 235
+ G VHRDL N L S N + KV+DFG S +V D +AY
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLS------RVLEDDPEAAYTT 207
Query: 236 --------YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 38/239 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGR-QFACK---SVAKRKL---VSKTDRDDIKREVQ 119
++ ++ K +G G++G E +GR + K SVA + L ++ R D E
Sbjct: 45 TNISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDI 177
IM PNI+ +G + V IV E +G L D + K ++ + R I
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY-- 235
+ G VHRDL N L S N + KV+DFG S +V D +AY
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLS------RVLEDDPEAAYTT 207
Query: 236 --------YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 38/239 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGR-QFACK---SVAKRKL---VSKTDRDDIKREVQ 119
++ ++ K +G G++G E +GR + K SVA + L ++ R D E
Sbjct: 16 TNISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDI 177
IM PNI+ +G + V IV E +G L D + K ++ + R I
Sbjct: 70 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 127
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY-- 235
+ G VHRDL N L S N + KV+DFG S +V D +AY
Sbjct: 128 ASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLS------RVLEDDPEAAYTT 178
Query: 236 --------YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 38/239 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGR-QFACK---SVAKRKL---VSKTDRDDIKREVQ 119
++ ++ K +G G++G E +GR + K SVA + L ++ R D E
Sbjct: 33 TNISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 86
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDI 177
IM PNI+ +G + V IV E +G L D + K ++ + R I
Sbjct: 87 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 144
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY-- 235
+ G VHRDL N L S N + KV+DFG S +V D +AY
Sbjct: 145 ASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLS------RVLEDDPEAAYTT 195
Query: 236 --------YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 196 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 254
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 18/222 (8%)
Query: 70 TMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT-DRDDIKREVQIMQHLSGQP 128
T KELG GQ+G++ G+ VA + + + D+ E ++M +LS +
Sbjct: 12 TFLKELGTGQFGVV------KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE- 64
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH-YSERAAASVFRDIMHVVNVCHTK 187
+V+ G R + I+ E A+G L + + H + + + +D+ + +K
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---YVAPEVLR- 243
+HRDL N L ND+ ++KV+DFG S + + + Y VGS + + PEVL
Sbjct: 125 QFLHRDLAARNCLV--NDQ-GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMY 180
Query: 244 RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
++ + DIW+ GV+++ + S G P+ T + I QG
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 18/222 (8%)
Query: 70 TMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT-DRDDIKREVQIMQHLSGQP 128
T KELG GQ+G++ G+ VA + + + D+ E ++M +LS +
Sbjct: 18 TFLKELGTGQFGVV------KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE- 70
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH-YSERAAASVFRDIMHVVNVCHTK 187
+V+ G R + I+ E A+G L + + H + + + +D+ + +K
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 130
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---YVAPEVLR- 243
+HRDL N L ND+ ++KV+DFG S + + + Y VGS + + PEVL
Sbjct: 131 QFLHRDLAARNCLV--NDQ-GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMY 186
Query: 244 RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
++ + DIW+ GV+++ + S G P+ T + I QG
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 228
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 366 NLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGT 425
+L EEI++L+E F E D D +G ++ +L + +G M TE ++ + Q +++ G
Sbjct: 18 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 77
Query: 426 IDYIEFITATMQRHKLER-----FEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDA 480
+D+ +F+ + E + L AF+ FD + G I+ EL A ++ +G
Sbjct: 78 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKL-LGHQV 136
Query: 481 TIATIKEIMSEVDRDKDGRISYDEFRAMM 509
I+EI+ +VD + DGR+ ++EF MM
Sbjct: 137 GHRDIEEIIRDVDLNGDGRVDFEEFVRMM 165
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 361 KVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAK-LGSMLTESDIKQYMQAAD 419
K++ E +++L++ F E DT+ +G +S EL+ + K LG + DI++ ++ D
Sbjct: 90 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD 149
Query: 420 IDGNGTIDYIEFI 432
++G+G +D+ EF+
Sbjct: 150 LNGDGRVDFEEFV 162
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 6/128 (4%)
Query: 387 NGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFITATMQRHKLER--- 443
+G++S EL + LG T ++++ + D DG+GT+D+ EF+ ++ K +
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 444 -FEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISY 502
E L F+ FDK+ GYI ++EL+ + G+ T I+E+M + D++ DGRI Y
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQ--ATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 503 DEFRAMMK 510
DEF MK
Sbjct: 151 DEFLEFMK 158
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 373 QKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFI 432
++L + F D + +G + +ELK L G +TE DI++ M+ D + +G IDY EF+
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 38/239 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGR-QFACK---SVAKRKL---VSKTDRDDIKREVQ 119
++ ++ K +G G++G E +GR + K SVA + L ++ R D E
Sbjct: 43 TNISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 96
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDI 177
IM PNI+ +G + V IV E +G L D + K ++ + R I
Sbjct: 97 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 154
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY-- 235
+ G VHRDL N L S N + KV+DFG S +V D +AY
Sbjct: 155 ASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLS------RVLEDDPEAAYTT 205
Query: 236 --------YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 206 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 26/227 (11%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKL-VSKTDRDDIKREVQIMQHLSGQPNIV 131
K +G G++G + G++ C ++ K + R D E IM PNI+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 78
Query: 132 EFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDIMHVVNVCHTKGV 189
+G + V I+ E +G L D + K G ++ + R I +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 137
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY----------YVAP 239
VHRDL N L SN + KV+DFG S +V D +AY + AP
Sbjct: 138 VHRDLAARNILVNSN---LVCKVSDFGMS------RVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 240 EVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
E + R++ D+WS G++++ ++S G P+W + + + AI +G
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 235
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 15/187 (8%)
Query: 107 SKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GH 164
++ R D E IM PN++ +G V I+ E +G L D + + G
Sbjct: 48 TEKQRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQ 105
Query: 165 YSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG 224
++ + R I + VHR L N L SN + KV+DFG S F E+
Sbjct: 106 FTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSN---LVCKVSDFGLSRFLEDD 162
Query: 225 K---VYRDIVGSAY---YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKG 276
Y +G + APE ++ R++ D+WS G++++ ++S G P+W T +
Sbjct: 163 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD 222
Query: 277 IFDAILQ 283
+ +AI Q
Sbjct: 223 VINAIEQ 229
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 6/128 (4%)
Query: 387 NGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFITATMQRHKLER--- 443
+G++S EL + LG T ++++ + D DG+GT+D+ EF+ ++ K +
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 444 -FEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISY 502
E L F+ +DK+ GYI +DEL+ + G+ T I+E+M + D++ DGRI Y
Sbjct: 93 SEEELSDLFRMWDKNADGYIDLDELKIMLQ--ATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 503 DEFRAMMK 510
DEF MK
Sbjct: 151 DEFLEFMK 158
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 373 QKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFI 432
++L + F D + +G + DELK L G +TE DI++ M+ D + +G IDY EF+
Sbjct: 95 EELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 6/128 (4%)
Query: 387 NGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFITATMQRHKLE---- 442
+G++S EL + LG T ++++ + D DG+GT+D+ EF+ ++ K +
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 443 RFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISY 502
E L F+ FDK+ GYI +DEL+ + G+ T I+E+M + D++ DGRI Y
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQ--ATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 503 DEFRAMMK 510
DE+ MK
Sbjct: 151 DEWLEFMK 158
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 373 QKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFI 432
++L + F D + +G + DELK L G +TE DI++ M+ D + +G IDY E++
Sbjct: 95 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWL 154
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 26/227 (11%)
Query: 73 KELGRGQYGIIYLCIENSTGRQFACKSVAKRKL-VSKTDRDDIKREVQIMQHLSGQPNIV 131
K +G G++G + G++ C ++ K + R D E IM PNI+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 72
Query: 132 EFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDIMHVVNVCHTKGV 189
+G + V I+ E +G L D + K G ++ + R I +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 131
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY----------YVAP 239
VHRDL N L SN + KV+DFG S +V D +AY + AP
Sbjct: 132 VHRDLAARNILVNSN---LVCKVSDFGMS------RVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 240 EVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
E + R++ D+WS G++++ ++S G P+W + + + AI +G
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 229
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 6/128 (4%)
Query: 387 NGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFITATMQRHKLER--- 443
+G++S EL + LG T ++++ + D DG+GT+D+ EF+ ++ K +
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 444 -FEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISY 502
E L F+ FDK+ GYI ++EL+ + G+ T I+E+M + D++ DGRI Y
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQ--ATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 503 DEFRAMMK 510
DEF MK
Sbjct: 151 DEFLEFMK 158
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 373 QKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFI 432
++L + F D + +G + +ELK L G +TE DI++ M+ D + +G IDY EF+
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 105/262 (40%), Gaps = 29/262 (11%)
Query: 40 PEAQFSGPEPLPHSPDTILGKPY--EDVKSHYTMGKELGRGQYG-IIYLCIENSTGRQFA 96
PE QF EP + G+ + E S + K +G G G + Y + R
Sbjct: 21 PEPQFYA-EPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVP 79
Query: 97 CKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGEL- 155
A + ++ R D E IM PNI+ +G R IV E +G L
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 156 -FDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTD 214
F R G ++ + R + + G VHRDL N L D N + KV+D
Sbjct: 139 TFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSD 194
Query: 215 FGFSFFFEE----------GKVYRDIVGSAYYVAPEVLR-RRYGKEIDIWSAGVILY-IL 262
FG S E+ GK+ + APE + R + D+WS GV+++ +L
Sbjct: 195 FGLSRVLEDDPDAAXTTTGGKI------PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
Query: 263 LSGVPPFWAETEKGIFDAILQG 284
G P+W T + + ++ +G
Sbjct: 249 AYGERPYWNMTNRDVISSVEEG 270
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E+ Q+++E F D D GT+ ELK LG + +IK+ + D +G G
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKX 84
Query: 427 DYIEFITATMQR-HKLERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATI 485
++ +F+T Q+ + + E + KAF+ FD D +G I+ L+ KE +G++ T +
Sbjct: 85 NFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKE--LGENLTDEEL 142
Query: 486 KEIMSEVDRDKDGRISYDEFRAMMK 510
+E + E DRD DG +S EF + K
Sbjct: 143 QEXIDEADRDGDGEVSEQEFLRIXK 167
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 121/265 (45%), Gaps = 25/265 (9%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQ 119
+E T+G+ +G G +G +Y G+ +V + + T + K EV
Sbjct: 7 WEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 60
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIA-KGHYSERAAASVFRDIM 178
+++ + NI+ F G Y + IV + C L+ + A + + + + R
Sbjct: 61 VLRK-TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTA 118
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF---FEEGKVYRDIVGSAY 235
++ H K ++HRDLK N E+ +K+ DFG + + + + GS
Sbjct: 119 RGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 236 YVAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPFWAETEKG-IFDAILQGNIDFDS 290
++APEV+R + Y + D+++ G++LY L++G P+ + I + + +G++ D
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 235
Query: 291 APWPTISSGAKDLVRRMLTQDPKKR 315
+ + S ++R++ + KK+
Sbjct: 236 S---KVRSNCPKRMKRLMAECLKKK 257
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 33/204 (16%)
Query: 142 FVHIVMELCADGELFDRIIAKGHYSER---AAASVFRDIMHVVNVCHTKGVVHRDLKPEN 198
+++I M+LC L D + + +R +F I V H+KG++HRDLKP N
Sbjct: 135 YLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSN 194
Query: 199 FLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI-------------VGSAYYVAPEVLR-R 244
FT +D ++KV DFG ++ + + + VG+ Y++PE +
Sbjct: 195 IFFTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGN 251
Query: 245 RYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKD-- 302
Y ++DI+S G+IL+ LL F + E+ ++ D + +P + +
Sbjct: 252 NYSHKVDIFSLGLILFELLYS---FSTQMER------VRIITDVRNLKFPLLFTQKYPQE 302
Query: 303 --LVRRMLTQDPKKRITAAEVLEH 324
+V+ ML+ P +R A +++E+
Sbjct: 303 HMMVQDMLSPSPTERPEATDIIEN 326
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 366 NLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGT 425
+L EEI++L+E F E D D +G ++ +L + +G M TE ++ + Q +++ G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 426 IDYIEFITATMQRHKLER-----FEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDA 480
+D+ +F+ + E + L AF+ FD + G I+ EL A ++ +G
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKL-LGHQV 122
Query: 481 TIATIKEIMSEVDRDKDGRISYDEFRAMM 509
I+EI+ +VD + DGR+ ++EF MM
Sbjct: 123 GHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 361 KVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAK-LGSMLTESDIKQYMQAAD 419
K++ E +++L++ F E DT+ +G +S EL+ + K LG + DI++ ++ D
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD 135
Query: 420 IDGNGTIDYIEFI 432
++G+G +D+ EF+
Sbjct: 136 LNGDGRVDFEEFV 148
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 38/239 (15%)
Query: 67 SHYTMGKELGRGQYGIIYLCIENSTGR-QFACK---SVAKRKL---VSKTDRDDIKREVQ 119
++ ++ K +G G++G E +GR + K SVA + L ++ R D E
Sbjct: 45 TNISIDKVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDI 177
IM PNI+ +G + V IV E +G L D + K ++ + R I
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 178 MHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY-- 235
+ G VHRDL N L S N + KV+DFG + +V D +AY
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLA------RVLEDDPEAAYTT 207
Query: 236 --------YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
+ +PE + R++ D+WS G++L+ ++S G P+W + + + A+ +G
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 387 NGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFITATMQRHKLER--- 443
+G +S EL + LG T ++++ + D DG+GT+D+ EF+ ++ K +
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGK 92
Query: 444 -FEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISY 502
E L F+ FDK+ GYI ++EL+ + G+ T I+E+M + D++ DGRI Y
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQ--ATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 503 DEFRAMMKS 511
DEF MK
Sbjct: 151 DEFLEFMKG 159
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 373 QKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFI 432
++L + F D + +G + +ELK L G +TE DI++ M+ D + +G IDY EF+
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 120/287 (41%), Gaps = 65/287 (22%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
+G G +G ++ G+ + + V K + + +REV+ + L NIV +
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRV-------KYNNEKAEREVKALAKLD-HVNIVHYN 71
Query: 135 GAYEDMRF-----------------------------VHIVMELCADGELFDRIIAK-GH 164
G ++ + + I ME C G L I + G
Sbjct: 72 GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 165 YSERAAA-SVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGF-SFFFE 222
++ A +F I V+ H+K ++HRDLKP N + +K+ DFG +
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKN 188
Query: 223 EGKVYRDIVGSAYYVAPEVLRRR-YGKEIDIWSAGVILYILLS------GVPPFWAETEK 275
+GK R G+ Y++PE + + YGKE+D+++ G+IL LL F+ +
Sbjct: 189 DGKRTRS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRD 247
Query: 276 GIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVL 322
GI I FD K L++++L++ P+ R +E+L
Sbjct: 248 GIISDI------FDKK--------EKTLLQKLLSKKPEDRPNTSEIL 280
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 121/265 (45%), Gaps = 25/265 (9%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQ 119
+E T+G+ +G G +G +Y G+ +V + + T + K EV
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIA-KGHYSERAAASVFRDIM 178
+++ + NI+ F G Y + IV + C L+ + A + + + + R
Sbjct: 73 VLRK-TRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTA 130
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF---FFEEGKVYRDIVGSAY 235
++ H K ++HRDLK N E+ +K+ DFG + + + + GS
Sbjct: 131 RGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 236 YVAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPFWAETEKG-IFDAILQGNIDFDS 290
++APEV+R + Y + D+++ G++LY L++G P+ + I + + +G++ D
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 247
Query: 291 APWPTISSGAKDLVRRMLTQDPKKR 315
+ + S ++R++ + KK+
Sbjct: 248 S---KVRSNCPKRMKRLMAECLKKK 269
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 19/226 (8%)
Query: 51 PHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD 110
P SP+ +E ++ TM +LG GQYG +Y + A K++ + + +
Sbjct: 5 PSSPNY---DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----E 57
Query: 111 RDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAA 170
++ +E +M+ + PN+V+ G +I++E G L D + A
Sbjct: 58 VEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV 116
Query: 171 ASVF--RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYR 228
++ I + K +HRDL N L EN ++KV DFG S G Y
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYT 172
Query: 229 DIVGSAY---YVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
G+ + + APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 121/265 (45%), Gaps = 25/265 (9%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQ 119
+E T+G+ +G G +G +Y G+ +V + + T + K EV
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIA-KGHYSERAAASVFRDIM 178
+++ + NI+ F G Y + IV + C L+ + A + + + + R
Sbjct: 73 VLRK-TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTA 130
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF---FFEEGKVYRDIVGSAY 235
++ H K ++HRDLK N E+ +K+ DFG + + + + GS
Sbjct: 131 RGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 236 YVAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPFWAETEKG-IFDAILQGNIDFDS 290
++APEV+R + Y + D+++ G++LY L++G P+ + I + + +G++ D
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 247
Query: 291 APWPTISSGAKDLVRRMLTQDPKKR 315
+ + S ++R++ + KK+
Sbjct: 248 S---KVRSNCPKRMKRLMAECLKKK 269
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 6/128 (4%)
Query: 387 NGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFITATMQRHKLER--- 443
+G++S EL + LG T ++++ + D DG+GT+D+ EF+ ++ K +
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 444 -FEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISY 502
E L F+ DK+ GYI +DEL+ + G+ T I+E+M + D++ DGRI Y
Sbjct: 93 SEEELSDLFRMXDKNADGYIDLDELKIMLQ--ATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 503 DEFRAMMK 510
DEF MK
Sbjct: 151 DEFLEFMK 158
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 373 QKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFI 432
++L + F D + +G + DELK L G +TE DI++ M+ D + +G IDY EF+
Sbjct: 95 EELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 6/128 (4%)
Query: 387 NGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFITATMQRHKLE---- 442
+G++S EL + LG T ++++ + D DG+GT+D+ EF+ ++ K +
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 443 RFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISY 502
E L F+ FDK+ GYI +DEL+ + G+ T I+E+M + D++ DGRI Y
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQ--ATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 503 DEFRAMMK 510
DE MK
Sbjct: 151 DEXLEFMK 158
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 373 QKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFI 432
++L + F D + +G + DELK L G +TE DI++ M+ D + +G IDY E +
Sbjct: 95 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXL 154
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQ 119
+E T+G+ +G G +G +Y G+ +V + + T + K EV
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 56
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIM 178
+++ + NI+ F G Y + IV + C L+ + I + + + R
Sbjct: 57 VLRK-TRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 114
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF---FEEGKVYRDIVGSAY 235
++ H K ++HRDLK N E+ +K+ DFG + + + + GS
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 236 YVAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPF 269
++APEV+R + Y + D+++ G++LY L++G P+
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Query: 366 NLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGT 425
+L EEI++L+E F E D D +G ++ +L + +G M TE ++ + Q +++ G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 426 IDYIEFITATMQRHKLER-----FEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDA 480
+D+ +F+ + E + L AF+ FD + G I+ EL A + +G
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRAL-LGHQV 122
Query: 481 TIATIKEIMSEVDRDKDGRISYDEFRAMM 509
I+EI+ +VD + DGR+ ++EF MM
Sbjct: 123 GHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 361 KVIVENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGL-AKLGSMLTESDIKQYMQAAD 419
K++ E +++L++ F E DT+ +G +S EL+ + A LG + DI++ ++ D
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVD 135
Query: 420 IDGNGTIDYIEFI 432
++G+G +D+ EF+
Sbjct: 136 LNGDGRVDFEEFV 148
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 19/226 (8%)
Query: 51 PHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD 110
P SP+ +E ++ TM +LG GQYG +Y + A K++ + + +
Sbjct: 5 PSSPNY---DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----E 57
Query: 111 RDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAA 170
++ +E +M+ + PN+V+ G +I+ E G L D + A
Sbjct: 58 VEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 116
Query: 171 ASVF--RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYR 228
++ I + K +HRDL N L EN ++KV DFG S G Y
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYT 172
Query: 229 DIVGSAY---YVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
G+ + + APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 19/226 (8%)
Query: 51 PHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD 110
P SP+ +E ++ TM +LG GQYG +Y + A K++ + + +
Sbjct: 5 PSSPNY---DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----E 57
Query: 111 RDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFD--RIIAKGHYSER 168
++ +E +M+ + PN+V+ G +I+ E G L D R + S
Sbjct: 58 VEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 116
Query: 169 AAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYR 228
+ I + K +HRDL N L EN ++KV DFG S G Y
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYT 172
Query: 229 DIVGSAY---YVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
G+ + + APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQ 119
+E T+G+ +G G +G +Y G+ +V + + T + K EV
Sbjct: 8 WEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 61
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIM 178
+++ + NI+ F G Y + IV + C L+ + I + + + R
Sbjct: 62 VLRK-TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 119
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF---FEEGKVYRDIVGSAY 235
++ H K ++HRDLK N E+ +K+ DFG + + + + GS
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 236 YVAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPF 269
++APEV+R + Y + D+++ G++LY L++G P+
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQ 119
+E T+G+ +G G +G +Y G+ +V + + T + K EV
Sbjct: 8 WEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 61
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIM 178
+++ + NI+ F G Y + IV + C L+ + I + + + R
Sbjct: 62 VLRK-TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 119
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF---FEEGKVYRDIVGSAY 235
++ H K ++HRDLK N E+ +K+ DFG + + + + GS
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 236 YVAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPF 269
++APEV+R + Y + D+++ G++LY L++G P+
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 15/228 (6%)
Query: 67 SHYTMGKELGRGQYGIIYL-CIENSTGRQFACKSVAKRKL-VSKTDRDDIKREVQIMQHL 124
S T K +G G++G +Y ++ S+G++ ++ K ++ R D E IM
Sbjct: 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFRDIMHVVN 182
S NI+ +G + + I+ E +G L D+ + + G +S + R I +
Sbjct: 104 SHH-NIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGIAAGMK 161
Query: 183 VCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEG--KVYRDIVG--SAYYVA 238
VHRDL N L S N + KV+DFG S E+ Y G + A
Sbjct: 162 YLANMNYVHRDLAARNILVNS---NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 218
Query: 239 PEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQG 284
PE + R++ D+WS G++++ ++ G P+W + + AI G
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG 266
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQ 119
+E T+G+ +G G +G +Y G+ +V + + T + K EV
Sbjct: 30 WEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 83
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIM 178
+++ + NI+ F G Y + IV + C L+ + I + + + R
Sbjct: 84 VLRK-TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 141
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF---FEEGKVYRDIVGSAY 235
++ H K ++HRDLK N E+ +K+ DFG + + + + GS
Sbjct: 142 QGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 198
Query: 236 YVAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPF 269
++APEV+R + Y + D+++ G++LY L++G P+
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQ 119
+E T+G+ +G G +G +Y G+ +V + + T + K EV
Sbjct: 5 WEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 58
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIM 178
+++ + NI+ F G Y + IV + C L+ + I + + + R
Sbjct: 59 VLRK-TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 116
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF---FEEGKVYRDIVGSAY 235
++ H K ++HRDLK N E+ +K+ DFG + + + + GS
Sbjct: 117 QGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 173
Query: 236 YVAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPF 269
++APEV+R + Y + D+++ G++LY L++G P+
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 18/223 (8%)
Query: 70 TMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT-DRDDIKREVQIMQHLSGQP 128
T+ KELG GQ+G++ L G+ VA + + + D+ +E Q M LS P
Sbjct: 11 TLLKELGSGQFGVVKL------GKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS-HP 63
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAA-ASVFRDIMHVVNVCHTK 187
+V+F G ++IV E ++G L + + + G E + + D+ + +
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH 123
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---YVAPEVLRR 244
+HRDL N L D + +KV+DFG + + + + Y VG+ + + APEV
Sbjct: 124 QFIHRDLAARNCLV---DRDLCVKVSDFGMTRYVLDDQ-YVSSVGTKFPVKWSAPEVFHY 179
Query: 245 -RYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGN 285
+Y + D+W+ G++++ + S G P+ T + + QG+
Sbjct: 180 FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH 222
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 38/287 (13%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
HY ++LG G + + L G +A K + + + DR++ +RE M L
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE---QQDREEAQREAD-MHRLFNH 85
Query: 128 PNIVEF-------KGAYEDMRFVHIVMELCADGELFD---RIIAKGHY-SERAAASVFRD 176
PNI+ +GA + +++ G L++ R+ KG++ +E +
Sbjct: 86 PNILRLVAYCLRERGAKHE---AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGK----VYRDIVG 232
I + H KG HRDLKP N L + +M + + EG +D
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
Query: 233 ---SAYYVAPEVLRRRYGKEI----DIWSAGVILYILLSGVPPFWAETEKGIFDAI-LQG 284
+ Y APE+ + I D+WS G +LY ++ G P+ +KG A+ +Q
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN 262
Query: 285 NIDFDSAPWPTISSGAKDLVRRMLTQDPKKR------ITAAEVLEHP 325
+ + P SS L+ M+T DP +R ++ E L+ P
Sbjct: 263 QLSIPQS--PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 19/226 (8%)
Query: 51 PHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD 110
P SP+ +E ++ TM +LG GQYG +Y + A K++ + + +
Sbjct: 5 PSSPNY---DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----E 57
Query: 111 RDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAA 170
++ +E +M+ + PN+V+ G +I+ E G L D + A
Sbjct: 58 VEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 116
Query: 171 ASVF--RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYR 228
++ I + K +HRDL N L EN ++KV DFG S G Y
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYT 172
Query: 229 DIVGSAY---YVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
G+ + + APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQ 119
+E T+G+ +G G +G +Y G+ +V + + T + K EV
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 56
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIM 178
+++ + NI+ F G Y + IV + C L+ + I + + + R
Sbjct: 57 VLRK-TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 114
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF---FEEGKVYRDIVGSAY 235
++ H K ++HRDLK N E+ +K+ DFG + + + + GS
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 236 YVAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPF 269
++APEV+R + Y + D+++ G++LY L++G P+
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 63
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFD--RIIAKGHYSERAAASVFRDIMH 179
+ + PN+V+ G +I++E G L D R + S + I
Sbjct: 64 KEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G Y G+ + +
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 178
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQ 119
+E T+G+ +G G +G +Y G+ +V + + T + K EV
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIM 178
+++ + NI+ F G Y + IV + C L+ + I + + + R
Sbjct: 85 VLRK-TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 142
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF---FEEGKVYRDIVGSAY 235
++ H K ++HRDLK N E+ +K+ DFG + + + + GS
Sbjct: 143 QGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 236 YVAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPF 269
++APEV+R + Y + D+++ G++LY L++G P+
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 9 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 64
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMH 179
+ + PN+V+ G +I+ E G L D + A ++ I
Sbjct: 65 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G Y G+ + +
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKW 179
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 10 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 65
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMH 179
+ + PN+V+ G +I+ E G L D + A ++ I
Sbjct: 66 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G Y G+ + +
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKW 180
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 63
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMH 179
+ + PN+V+ G +I++E G L D + A ++ I
Sbjct: 64 KEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G Y G+ + +
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 178
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DI 114
P + + H ++LG+G +G + +C ++++TG + VA +KL T+ D
Sbjct: 7 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDF 61
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+RE++I++ L NIV++KG R + ++ME G L D + A ++ER
Sbjct: 62 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQA---HAERIDH- 116
Query: 173 VFRDIMHVVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF----E 222
+ + + +C TK +HRDL N L +EN + K+ DFG + E
Sbjct: 117 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKE 172
Query: 223 EGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGV 266
KV ++ APE L ++ D+WS GV+LY L + +
Sbjct: 173 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 58/312 (18%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAK-----RKLVSKTDR---DDIKR 116
++S YT+ + + G YG + ++ S G A K V R + +D + R
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHI----VMELCADGELFDRIIAKGHYSERAAAS 172
E++++ H PNI+ + FVH + +L EL +A+ + +R S
Sbjct: 79 EIRLLNHFH-HPNILGLRDI-----FVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVIS 132
Query: 173 ------VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
I+ ++V H GVVHRDL P N L N++ + + DF +
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND---ITICDFNLAREDTADAN 189
Query: 227 YRDIVGSAYYVAPEVLRRRYG--KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ- 283
V +Y APE++ + G K +D+WSAG ++ + + F T + I++
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV 249
Query: 284 ------GNIDFDSAP-----------------W----PTISSGAKDLVRRMLTQDPKKRI 316
++ S+P W PT A DL+ +ML +P++RI
Sbjct: 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309
Query: 317 TAAEVLEHPWLK 328
+ + L HP+ +
Sbjct: 310 STEQALRHPYFE 321
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 10 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 65
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMH 179
+ + PN+V+ G +I+ E G L D + A ++ I
Sbjct: 66 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G Y G+ + +
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 180
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 58/312 (18%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAK-----RKLVSKTDR---DDIKR 116
++S YT+ + + G YG + ++ S G A K V R + +D + R
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHI----VMELCADGELFDRIIAKGHYSERAAAS 172
E++++ H PNI+ + FVH + +L EL +A+ + +R S
Sbjct: 79 EIRLLNHFH-HPNILGLRDI-----FVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVIS 132
Query: 173 ------VFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
I+ ++V H GVVHRDL P N L N++ + + DF +
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND---ITICDFNLAREDTADAN 189
Query: 227 YRDIVGSAYYVAPEVLRRRYG--KEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILQ- 283
V +Y APE++ + G K +D+WSAG ++ + + F T + I++
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV 249
Query: 284 ------GNIDFDSAP-----------------W----PTISSGAKDLVRRMLTQDPKKRI 316
++ S+P W PT A DL+ +ML +P++RI
Sbjct: 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309
Query: 317 TAAEVLEHPWLK 328
+ + L HP+ +
Sbjct: 310 STEQALRHPYFE 321
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQ 119
+E T+G+ +G G +G +Y G+ +V + + T + K EV
Sbjct: 23 WEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 76
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIM 178
+++ + NI+ F G Y + IV + C L+ + I + + + R
Sbjct: 77 VLRK-TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 134
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF---FFEEGKVYRDIVGSAY 235
++ H K ++HRDLK N E+ +K+ DFG + + + + GS
Sbjct: 135 QGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 191
Query: 236 YVAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPF 269
++APEV+R + Y + D+++ G++LY L++G P+
Sbjct: 192 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 128/297 (43%), Gaps = 50/297 (16%)
Query: 70 TMGKELGRGQYGIIYL--CIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQ 127
+ +ELG G +G ++L C S + +V K + R D +RE +++ +L +
Sbjct: 18 VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHE 77
Query: 128 PNIVEFKGAYEDMRFVHIVMELCADGEL--FDR-------IIAKGHYSERAAASVFRDIM 178
+IV+F G D + +V E G+L F R I+ G + ++
Sbjct: 78 -HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 179 HVVNVCHTKGV-------VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIV 231
H+ + + V VHRDL N L +N ++K+ DFG S RD+
Sbjct: 137 HIASQIASGMVYLASQHFVHRDLATRNCLVGAN---LLVKIGDFGMS---------RDVY 184
Query: 232 GSAYY------------VAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGI 277
+ YY + PE ++ R++ E D+WS GVIL+ I G P++ + +
Sbjct: 185 STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 244
Query: 278 FDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGKAS 334
+ I QG + P D++ ++P++R+ E+ + L GKA+
Sbjct: 245 IECITQGRVLERPRVCP---KEVYDVMLGCWQREPQQRLNIKEI--YKILHALGKAT 296
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 63
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMH 179
+ + PN+V+ G +I+ E G L D + A ++ I
Sbjct: 64 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G Y G+ + +
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 178
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQ 119
+E T+G+ +G G +G +Y G+ +V + + T + K EV
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIM 178
+++ + NI+ F G Y + IV + C L+ + I + + + R
Sbjct: 85 VLRK-TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 142
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF---FFEEGKVYRDIVGSAY 235
++ H K ++HRDLK N E+ +K+ DFG + + + + GS
Sbjct: 143 QGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 199
Query: 236 YVAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPF 269
++APEV+R + Y + D+++ G++LY L++G P+
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 12 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 67
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMH 179
+ + PN+V+ G +I+ E G L D + A ++ I
Sbjct: 68 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G Y G+ + +
Sbjct: 127 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 182
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQ 119
+E T+G+ +G G +G +Y G+ +V + + T + K EV
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 56
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIM 178
+++ + NI+ F G Y + IV + C L+ + I + + + R
Sbjct: 57 VLRK-TRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 114
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF---FFEEGKVYRDIVGSAY 235
++ H K ++HRDLK N E+ +K+ DFG + + + + GS
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 171
Query: 236 YVAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPF 269
++APEV+R + Y + D+++ G++LY L++G P+
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 21 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 76
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMH 179
+ + PN+V+ G +I+ E G L D + A ++ I
Sbjct: 77 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G Y G+ + +
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 191
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 192 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 18/233 (7%)
Query: 59 GKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT-DRDDIKRE 117
G +E T KELG GQ+G++ G+ VA + + + D+ E
Sbjct: 1 GGSWEIDPKDLTFLKELGTGQFGVV------KYGKWRGQYDVAIKMIKEGSMSEDEFIEE 54
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH-YSERAAASVFRD 176
++M +LS + +V+ G R + I+ E A+G L + + H + + + +D
Sbjct: 55 AKVMMNLSHE-KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 113
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY- 235
+ + +K +HRDL N L ND+ ++KV+DFG S + + + Y GS +
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLV--NDQ-GVVKVSDFGLSRYVLDDE-YTSSRGSKFP 169
Query: 236 --YVAPEVLR-RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
+ PEVL ++ + DIW+ GV+++ + S G P+ T + I QG
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 10 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 65
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMH 179
+ + PN+V+ G +I+ E G L D + A ++ I
Sbjct: 66 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G Y G+ + +
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 180
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 70 TMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKT-DRDDIKREVQIMQHLSGQP 128
T KELG GQ+G++ G+ VA + + + D+ E ++M +LS +
Sbjct: 27 TFLKELGTGQFGVV------KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE- 79
Query: 129 NIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH-YSERAAASVFRDIMHVVNVCHTK 187
+V+ G R + I+ E A+G L + + H + + + +D+ + +K
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---YVAPEVLR- 243
+HRDL N L ND+ ++KV+DFG S + + + VGS + + PEVL
Sbjct: 140 QFLHRDLAARNCLV--NDQ-GVVKVSDFGLSRYVLDDEETSS-VGSKFPVRWSPPEVLMY 195
Query: 244 RRYGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQG 284
++ + DIW+ GV+++ + S G P+ T + I QG
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 63
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFD--RIIAKGHYSERAAASVFRDIMH 179
+ + PN+V+ G +I+ E G L D R + S + I
Sbjct: 64 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G Y G+ + +
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 178
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 16/230 (6%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y+ + A K++ + + + ++ +E +M
Sbjct: 27 WEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 82
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMH 179
+ + PN+V+ G +IV E G L D + A ++ I
Sbjct: 83 KEIK-HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISS 141
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G Y G+ + +
Sbjct: 142 AMEYLEKKNFIHRDLAARNCLV---GENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 197
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPFWAETEKGIFDAILQG 284
APE L + + D+W+ GV+L+ I G+ P+ ++D + +G
Sbjct: 198 TAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKG 247
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 63
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMH 179
+ + PN+V+ G +I+ E G L D + A ++ I
Sbjct: 64 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G Y G+ + +
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 178
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 63
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMH 179
+ + PN+V+ G +I+ E G L D + A ++ I
Sbjct: 64 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G Y G+ + +
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 178
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 39/280 (13%)
Query: 72 GKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIV 131
G+ LG+G +G TG K + + +T R +K EV++M+ L PN++
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLK-EVKVMRCLE-HPNVL 70
Query: 132 EFKGA-YEDMRFVHIVMELCADGELFDRIIAKG---HYSERAAASVFRDIMHVVNVCHTK 187
+F G Y+D R ++ + E G L R I K Y S +DI + H+
Sbjct: 71 KFIGVLYKDKR-LNFITEYIKGGTL--RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM 127
Query: 188 GVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRD---------------IVG 232
++HRDL N L EN + V DFG + + K + +VG
Sbjct: 128 NIIHRDLNSHNCLVR---ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 233 SAYYVAPEVLR-RRYGKEIDIWSAGVILYILLSGV---PPFWAETEKGIFDAILQGNIDF 288
+ Y++APE++ R Y +++D++S G++L ++ V P + T F ++G +D
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD--FGLNVRGFLD- 241
Query: 289 DSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLK 328
P P + R DP+KR + + LEH WL+
Sbjct: 242 RYCP-PNCPPSFFPITVRCCDLDPEKRPSFVK-LEH-WLE 278
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 270
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFD--RIIAKGHYSERAAASVFRDIMH 179
+ + PN+V+ G +I+ E G L D R + S + I
Sbjct: 271 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HR+L N L EN ++KV DFG S G Y G+ + +
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 385
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E+ Q++ E F+ D +N+G L Y ELK + LG L + +I + D +G +
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLM 76
Query: 427 DYIEFITATMQR-HKLERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATI 485
Y +F ++ K + + + +AFQ FD D++G I++ L KE +G+ T +
Sbjct: 77 KYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKE--LGETLTDEEL 134
Query: 486 KEIMSEVDRDKDGRISYDEFRAM 508
+ ++ E D D DG I+ +EF A+
Sbjct: 135 RAMIEEFDLDGDGEINENEFIAI 157
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 30/269 (11%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
+G G +G + G + ++ SK D D E++++ L PNI+
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 135 GAYEDMRFVHIVMELCADGELFDRI-------------IAKGHYSERAAASVFR---DIM 178
GA E ++++ +E G L D + IA S ++ + D+
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVY-RDIVG--SAY 235
++ K +HRDL N L EN + K+ DFG S +VY + +G
Sbjct: 153 RGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS---RGQEVYVKKTMGRLPVR 206
Query: 236 YVAPEVLRRR-YGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGNIDFDSAPW 293
++A E L Y D+WS GV+L+ ++S G P+ T +++ + QG +
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLEKP 263
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVL 322
DL+R+ + P +R + A++L
Sbjct: 264 LNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 30/269 (11%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
+G G +G + G + ++ SK D D E++++ L PNI+
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 135 GAYEDMRFVHIVMELCADGELFDRI-------------IAKGHYSERAAASVFR---DIM 178
GA E ++++ +E G L D + IA S ++ + D+
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVY-RDIVG--SAY 235
++ K +HRDL N L EN + K+ DFG S +VY + +G
Sbjct: 143 RGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS---RGQEVYVKKTMGRLPVR 196
Query: 236 YVAPEVLRRR-YGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGNIDFDSAPW 293
++A E L Y D+WS GV+L+ ++S G P+ T +++ + QG +
Sbjct: 197 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLEKP 253
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVL 322
DL+R+ + P +R + A++L
Sbjct: 254 LNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 212 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 267
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMH 179
+ + PN+V+ G +I+ E G L D + A ++ I
Sbjct: 268 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HR+L N L EN ++KV DFG S G Y G+ + +
Sbjct: 327 AMEYLEKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 382
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 383 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 417
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 43/254 (16%)
Query: 63 EDVKSH-YTMGKELGRGQYGIIYL--CIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQ 119
+ +K H + +ELG G +G ++L C + +V K S R D RE +
Sbjct: 8 QHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAE 67
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGEL--FDR-------IIAKGH----YS 166
++ +L + +IV+F G + + +V E G+L F R ++A+G+ +
Sbjct: 68 LLTNLQHE-HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELT 126
Query: 167 ERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
+ + + I + ++ VHRDL N L EN ++K+ DFG S
Sbjct: 127 QSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENLLVKIGDFGMS-------- 175
Query: 227 YRDIVGSAYY------------VAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAE 272
RD+ + YY + PE ++ R++ E D+WS GV+L+ I G P++
Sbjct: 176 -RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 234
Query: 273 TEKGIFDAILQGNI 286
+ + + I QG +
Sbjct: 235 SNNEVIECITQGRV 248
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 254 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 309
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMH 179
+ + PN+V+ G +I+ E G L D + A ++ I
Sbjct: 310 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HR+L N L EN ++KV DFG S G Y G+ + +
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 424
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 425 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 459
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 114/262 (43%), Gaps = 35/262 (13%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRK- 104
LP P +E + T+GK LG G +G + + I+ ++ +V K
Sbjct: 24 LPEDPK------WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 105 LVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH 164
++ D D+ E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 165 YSERAAASV---------FRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENA 208
+ + F+D++ + ++ +HRDL N L T EN
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENN 194
Query: 209 IMKVTDFGFSFFFEEGKVYRDIVGS---AYYVAPEVL-RRRYGKEIDIWSAGVILY-ILL 263
+MK+ DFG + Y++ ++APE L R Y + D+WS GV+++ I
Sbjct: 195 VMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 264 SGVPPFWAETEKGIFDAILQGN 285
G P+ + +F + +G+
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGH 276
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DI 114
P + + H ++LG+G +G + +C ++++TG + VA +KL T+ D
Sbjct: 35 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDF 89
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+RE++I++ L NIV++KG R + ++ME G L D + + ER
Sbjct: 90 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDH- 144
Query: 173 VFRDIMHVVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF----E 222
+ + + +C TK +HRDL N L +EN + K+ DFG + E
Sbjct: 145 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKE 200
Query: 223 EGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGV 266
KV ++ APE L ++ D+WS GV+LY L + +
Sbjct: 201 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 245
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 6 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 61
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFD--RIIAKGHYSERAAASVFRDIMH 179
+ + PN+V+ G +I+ E G L D R + S + I
Sbjct: 62 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G + G+ + +
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKW 176
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD-DIKREVQIMQHLSG 126
H +LG+G +G + LC + G K+ S D+ D +RE+QI++ L
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 70
Query: 127 QPNIVEFKG-AYEDMR-FVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVC 184
IV+++G +Y R + +VME G L D + RA R +++ +C
Sbjct: 71 D-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-----QRHRARLDASRLLLYSSQIC 124
Query: 185 H------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI----VGSA 234
++ VHRDL N L S A +K+ DFG + K Y +
Sbjct: 125 KGMEYLGSRRCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDYYVVREPGQSPI 181
Query: 235 YYVAPEVLRRR-YGKEIDIWSAGVILYILLS 264
++ APE L + ++ D+WS GV+LY L +
Sbjct: 182 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 33/223 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DI 114
P + + H ++LG+G +G + +C ++++TG + VA +KL T+ D
Sbjct: 11 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDF 65
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+RE++I++ L NIV++KG R + ++ME G L D + + ER
Sbjct: 66 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDH- 120
Query: 173 VFRDIMHVVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF----E 222
+ + + +C TK +HRDL N L +EN + K+ DFG + E
Sbjct: 121 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKE 176
Query: 223 EGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLS 264
KV ++ APE L ++ D+WS GV+LY L +
Sbjct: 177 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DI 114
P + + H ++LG+G +G + +C ++++TG + VA +KL T+ D
Sbjct: 3 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDF 57
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+RE++I++ L NIV++KG R + ++ME G L D + + ER
Sbjct: 58 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDH- 112
Query: 173 VFRDIMHVVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF----E 222
+ + + +C TK +HRDL N L +EN + K+ DFG + E
Sbjct: 113 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKE 168
Query: 223 EGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGV 266
KV ++ APE L ++ D+WS GV+LY L + +
Sbjct: 169 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 213
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 116/266 (43%), Gaps = 21/266 (7%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELGRG YG++ +G+ A K + R V+ ++ + ++ I P V F
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRI--RATVNSQEQKRLLXDLDISXRTVDCPFTVTF 98
Query: 134 KGAYEDMRFVHIVMEL--CADGELFDRIIAKGH-YSERAAASVFRDIMHVVNVCHTK-GV 189
GA V I EL + + + ++I KG E + I+ + H+K V
Sbjct: 99 YGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 158
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI-VGSAYYVAPEVL-----R 243
+HRD+KP N L + + +K DFG S + + V +DI G Y APE + +
Sbjct: 159 IHRDVKPSNVLINALGQ---VKXCDFGISGYLVD-DVAKDIDAGCKPYXAPERINPELNQ 214
Query: 244 RRYGKEIDIWSAGVILYILLSGVPPF--WAETEKGIFDAILQGNIDFDSAPWPTISSGAK 301
+ Y + DIWS G+ L P+ W + + + + + P S+
Sbjct: 215 KGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQL---PADKFSAEFV 271
Query: 302 DLVRRMLTQDPKKRITAAEVLEHPWL 327
D + L ++ K+R T E+ +HP+
Sbjct: 272 DFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DI 114
P + + H ++LG+G +G + +C ++++TG + VA +KL T+ D
Sbjct: 2 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDF 56
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+RE++I++ L NIV++KG R + ++ME G L D + + ER
Sbjct: 57 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDH- 111
Query: 173 VFRDIMHVVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF----E 222
+ + + +C TK +HRDL N L +EN + K+ DFG + E
Sbjct: 112 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKE 167
Query: 223 EGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGV 266
KV ++ APE L ++ D+WS GV+LY L + +
Sbjct: 168 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DI 114
P + + H ++LG+G +G + +C ++++TG + VA +KL T+ D
Sbjct: 10 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDF 64
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+RE++I++ L NIV++KG R + ++ME G L D + + ER
Sbjct: 65 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDH- 119
Query: 173 VFRDIMHVVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF----E 222
+ + + +C TK +HRDL N L +EN + K+ DFG + E
Sbjct: 120 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKE 175
Query: 223 EGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGV 266
KV ++ APE L ++ D+WS GV+LY L + +
Sbjct: 176 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 220
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DI 114
P + + H ++LG+G +G + +C ++++TG + VA +KL T+ D
Sbjct: 4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDF 58
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+RE++I++ L NIV++KG R + ++ME G L D + + ER
Sbjct: 59 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDH- 113
Query: 173 VFRDIMHVVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF----E 222
+ + + +C TK +HRDL N L +EN + K+ DFG + E
Sbjct: 114 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKE 169
Query: 223 EGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGV 266
KV ++ APE L ++ D+WS GV+LY L + +
Sbjct: 170 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DI 114
P + + H ++LG+G +G + +C ++++TG + VA +KL T+ D
Sbjct: 9 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDF 63
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+RE++I++ L NIV++KG R + ++ME G L D + + ER
Sbjct: 64 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDH- 118
Query: 173 VFRDIMHVVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF----E 222
+ + + +C TK +HRDL N L +EN + K+ DFG + E
Sbjct: 119 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKE 174
Query: 223 EGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGV 266
KV ++ APE L ++ D+WS GV+LY L + +
Sbjct: 175 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DI 114
P + + H ++LG+G +G + +C ++++TG + VA +KL T+ D
Sbjct: 7 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDF 61
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+RE++I++ L NIV++KG R + ++ME G L D + + ER
Sbjct: 62 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDH- 116
Query: 173 VFRDIMHVVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF----E 222
+ + + +C TK +HRDL N L +EN + K+ DFG + E
Sbjct: 117 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKE 172
Query: 223 EGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGV 266
KV ++ APE L ++ D+WS GV+LY L + +
Sbjct: 173 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD-DIKREVQIMQHLSG 126
H +LG+G +G + LC + G K+ S D+ D +RE+QI++ L
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 71
Query: 127 QPNIVEFKG-AYEDMR-FVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVC 184
IV+++G +Y R + +VME G L D + RA R +++ +C
Sbjct: 72 D-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-----QRHRARLDASRLLLYSSQIC 125
Query: 185 H------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI----VGSA 234
++ VHRDL N L S A +K+ DFG + K Y +
Sbjct: 126 KGMEYLGSRRCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDYYVVREPGQSPI 182
Query: 235 YYVAPEVLRRR-YGKEIDIWSAGVILYILLS 264
++ APE L + ++ D+WS GV+LY L +
Sbjct: 183 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 33/225 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DI 114
P + + H ++LG+G +G + +C ++++TG + VA +KL T+ D
Sbjct: 5 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDF 59
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+RE++I++ L NIV++KG R + ++ME G L D + + ER
Sbjct: 60 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDH- 114
Query: 173 VFRDIMHVVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
+ + + +C TK +HR+L N L +EN + K+ DFG + + K
Sbjct: 115 -IKLLQYTSQICKGMEYLGTKRYIHRNLATRNILV--ENENRV-KIGDFGLTKVLPQDKE 170
Query: 227 YRDIV----GSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGV 266
Y + ++ APE L ++ D+WS GV+LY L + +
Sbjct: 171 YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DI 114
P + + H ++LG+G +G + +C ++++TG + VA +KL T+ D
Sbjct: 8 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDF 62
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+RE++I++ L NIV++KG R + ++ME G L D + + ER
Sbjct: 63 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDH- 117
Query: 173 VFRDIMHVVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF----E 222
+ + + +C TK +HRDL N L +EN + K+ DFG + E
Sbjct: 118 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKE 173
Query: 223 EGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGV 266
KV ++ APE L ++ D+WS GV+LY L + +
Sbjct: 174 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 218
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 134/336 (39%), Gaps = 88/336 (26%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGR-QFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
++ Y + LG G +G + C++++ G+ Q A K + V K R+ + E+ +++
Sbjct: 49 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKY-REAARLEINVLK- 103
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVM--------ELCADGELFDR----IIAKGHYSERAAA 171
+ K ++ +F+ ++M +C EL + + + ++
Sbjct: 104 --------KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLP 155
Query: 172 SVFR---DIMHVVNVCHTKGVVHRDLKPENFLFTSND----------------ENAIMKV 212
V + H + H + H DLKPEN LF +++ +N ++V
Sbjct: 156 HVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 215
Query: 213 TDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWA 271
DFG + F E + IV + +Y PEV L + + D+WS G IL+ G F
Sbjct: 216 ADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 273
Query: 272 ETEKG---IFDAIL------------------QGNIDFD--SAPWPTISSGAK------- 301
+ + + IL +G + +D S+ + K
Sbjct: 274 HENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYML 333
Query: 302 ----------DLVRRMLTQDPKKRITAAEVLEHPWL 327
DL+RRML DP +RIT AE L HP+
Sbjct: 334 QDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD-DIKREVQIMQHLSG 126
H +LG+G +G + LC + G K+ S D+ D +RE+QI++ L
Sbjct: 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 83
Query: 127 QPNIVEFKG-AYEDMR-FVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVC 184
IV+++G +Y R + +VME G L D + RA R +++ +C
Sbjct: 84 D-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-----QRHRARLDASRLLLYSSQIC 137
Query: 185 H------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI----VGSA 234
++ VHRDL N L S A +K+ DFG + K Y +
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDYYVVREPGQSPI 194
Query: 235 YYVAPEVLRRR-YGKEIDIWSAGVILYILLS 264
++ APE L + ++ D+WS GV+LY L +
Sbjct: 195 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 33/223 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DI 114
P + + H ++LG+G +G + +C ++++TG + VA +KL T+ D
Sbjct: 4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDF 58
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+RE++I++ L NIV++KG R + ++ME G L D + + ER
Sbjct: 59 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDH- 113
Query: 173 VFRDIMHVVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF----E 222
+ + + +C TK +HRDL N L +EN + K+ DFG + E
Sbjct: 114 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKE 169
Query: 223 EGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLS 264
KV ++ APE L ++ D+WS GV+LY L +
Sbjct: 170 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 33/225 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DI 114
P + + H ++LG+G +G + +C ++++TG + VA +KL T+ D
Sbjct: 4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDF 58
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+RE++I++ L NIV++KG R + ++ME G L D + + ER
Sbjct: 59 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDH- 113
Query: 173 VFRDIMHVVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKV 226
+ + + +C TK +HRDL N L +EN + K+ DFG + + K
Sbjct: 114 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKE 169
Query: 227 YRDIV----GSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGV 266
+ + ++ APE L ++ D+WS GV+LY L + +
Sbjct: 170 FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 134/336 (39%), Gaps = 88/336 (26%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGR-QFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
++ Y + LG G +G + C++++ G+ Q A K + V K R+ + E+ +++
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKY-REAARLEINVLK- 71
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVM--------ELCADGELFDR----IIAKGHYSERAAA 171
+ K ++ +F+ ++M +C EL + + + ++
Sbjct: 72 --------KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLP 123
Query: 172 SVFR---DIMHVVNVCHTKGVVHRDLKPENFLFTSND----------------ENAIMKV 212
V + H + H + H DLKPEN LF +++ +N ++V
Sbjct: 124 HVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 183
Query: 213 TDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWA 271
DFG + F E + IV + +Y PEV L + + D+WS G IL+ G F
Sbjct: 184 ADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 241
Query: 272 ETEKG---IFDAIL------------------QGNIDFD--SAPWPTISSGAK------- 301
+ + + IL +G + +D S+ + K
Sbjct: 242 HENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYML 301
Query: 302 ----------DLVRRMLTQDPKKRITAAEVLEHPWL 327
DL+RRML DP +RIT AE L HP+
Sbjct: 302 QDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 134/336 (39%), Gaps = 88/336 (26%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGR-QFACKSVAKRKLVSKTDRDDIKREVQIMQH 123
++ Y + LG G +G + C++++ G+ Q A K + V K R+ + E+ +++
Sbjct: 26 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKY-REAARLEINVLK- 80
Query: 124 LSGQPNIVEFKGAYEDMRFVHIVM--------ELCADGELFDR----IIAKGHYSERAAA 171
+ K ++ +F+ ++M +C EL + + + ++
Sbjct: 81 --------KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLP 132
Query: 172 SVFR---DIMHVVNVCHTKGVVHRDLKPENFLFTSND----------------ENAIMKV 212
V + H + H + H DLKPEN LF +++ +N ++V
Sbjct: 133 HVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 192
Query: 213 TDFGFSFFFEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWA 271
DFG + F E + IV + +Y PEV L + + D+WS G IL+ G F
Sbjct: 193 ADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 250
Query: 272 ETEKG---IFDAIL------------------QGNIDFD--SAPWPTISSGAK------- 301
+ + + IL +G + +D S+ + K
Sbjct: 251 HENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYML 310
Query: 302 ----------DLVRRMLTQDPKKRITAAEVLEHPWL 327
DL+RRML DP +RIT AE L HP+
Sbjct: 311 QDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 35/262 (13%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKL 105
LP P +E + T+GK LG G +G + + I+ ++ +V K
Sbjct: 70 LPEDPK------WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 123
Query: 106 -VSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKG- 163
++ D D+ E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 124 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 183
Query: 164 ---HYS---ERAAAS--VFRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENA 208
YS R F+D++ + ++ +HRDL N L T EN
Sbjct: 184 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENN 240
Query: 209 IMKVTDFGFSFFFEEGKVYRDIVGS---AYYVAPEVL-RRRYGKEIDIWSAGVILY-ILL 263
+MK+ DFG + Y+ ++APE L R Y + D+WS GV+++ I
Sbjct: 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
Query: 264 SGVPPFWAETEKGIFDAILQGN 285
G P+ + +F + +G+
Sbjct: 301 LGGSPYPGIPVEELFKLLKEGH 322
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 9 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 64
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVF--RDIMH 179
+ + PN+V+ G +I++E G L D + A ++ I
Sbjct: 65 KEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G G+ + +
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKW 179
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 19/226 (8%)
Query: 51 PHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD 110
P SP+ +E ++ TM +LG GQYG +Y + A K++ + + +
Sbjct: 5 PSSPNY---DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----E 57
Query: 111 RDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAA 170
++ +E +M+ + PN+V+ G +I+ E G L D + A
Sbjct: 58 VEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 116
Query: 171 ASVF--RDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYR 228
++ I + K +HRDL N L EN ++KV DFG S G
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXT 172
Query: 229 DIVGSAY---YVAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
G+ + + APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 29/250 (11%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLC--IENSTGRQFACKSVAKRKLVS---KTDRDDIKR 116
+E + +GK LG G +G + L I + VA + L S + D D+
Sbjct: 15 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 74
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK-------------- 162
E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 75 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 134
Query: 163 --GHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF 220
S + S + + +K +HRDL N L T E+ +MK+ DFG +
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARD 191
Query: 221 FEEGKVYRDIVGS---AYYVAPEVLRRR-YGKEIDIWSAGVILY-ILLSGVPPFWAETEK 275
Y+ ++APE L R Y + D+WS GV+L+ I G P+ +
Sbjct: 192 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 251
Query: 276 GIFDAILQGN 285
+F + +G+
Sbjct: 252 ELFKLLKEGH 261
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 33/216 (15%)
Query: 68 HYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQIM 121
H ++LG+G +G + +C ++++TG + VA +KL T+ D +RE++I+
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 122 QHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
+ L NIV++KG R + ++ME G L D + + ER + + +
Sbjct: 84 KSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDH--IKLLQY 137
Query: 180 VVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF----EEGKVYRD 229
+C TK +HRDL N L +EN + K+ DFG + E KV
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKEXXKVKEP 194
Query: 230 IVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLS 264
++ APE L ++ D+WS GV+LY L +
Sbjct: 195 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 33/216 (15%)
Query: 68 HYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQIM 121
H ++LG+G +G + +C ++++TG + VA +KL T+ D +RE++I+
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 122 QHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMH 179
+ L NIV++KG R + ++ME G L D + + ER + + +
Sbjct: 84 KSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDH--IKLLQY 137
Query: 180 VVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF----EEGKVYRD 229
+C TK +HRDL N L +EN + K+ DFG + E KV
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKEXXKVKEP 194
Query: 230 IVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLS 264
++ APE L ++ D+WS GV+LY L +
Sbjct: 195 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 29/250 (11%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLC--IENSTGRQFACKSVAKRKLVS---KTDRDDIKR 116
+E + +GK LG G +G + L I + VA + L S + D D+
Sbjct: 12 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 71
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK-------------- 162
E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 72 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 131
Query: 163 --GHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF 220
S + S + + +K +HRDL N L T E+ +MK+ DFG +
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARD 188
Query: 221 FEEGKVYRDIVGS---AYYVAPEVLRRR-YGKEIDIWSAGVILY-ILLSGVPPFWAETEK 275
Y+ ++APE L R Y + D+WS GV+L+ I G P+ +
Sbjct: 189 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 248
Query: 276 GIFDAILQGN 285
+F + +G+
Sbjct: 249 ELFKLLKEGH 258
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 29/250 (11%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLC--IENSTGRQFACKSVAKRKLVS---KTDRDDIKR 116
+E + +GK LG G +G + L I + VA + L S + D D+
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 82
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKG------------- 163
E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHN 142
Query: 164 ---HYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF 220
S + S + + +K +HRDL N L T E+ +MK+ DFG +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARD 199
Query: 221 FEEGKVYRDIVGS---AYYVAPEVLRRR-YGKEIDIWSAGVILY-ILLSGVPPFWAETEK 275
Y+ ++APE L R Y + D+WS GV+L+ I G P+ +
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
Query: 276 GIFDAILQGN 285
+F + +G+
Sbjct: 260 ELFKLLKEGH 269
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 35/262 (13%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRK- 104
LP P +E + T+GK LG G +G + + I+ ++ +V K
Sbjct: 24 LPEDPK------WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 105 LVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH 164
++ D D+ E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 165 YSERAAASV---------FRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENA 208
+ + F+D++ + ++ +HRDL N L T EN
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENN 194
Query: 209 IMKVTDFGFSFFFEEGKVYRDIVGS---AYYVAPEVL-RRRYGKEIDIWSAGVILY-ILL 263
+MK+ DFG + Y+ ++APE L R Y + D+WS GV+++ I
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 264 SGVPPFWAETEKGIFDAILQGN 285
G P+ + +F + +G+
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGH 276
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 29/250 (11%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLC--IENSTGRQFACKSVAKRKLVS---KTDRDDIKR 116
+E + +GK LG G +G + L I + VA + L S + D D+
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 82
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK-------------- 162
E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 142
Query: 163 --GHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF 220
S + S + + +K +HRDL N L T E+ +MK+ DFG +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARD 199
Query: 221 FEEGKVYRDIVGS---AYYVAPEVLRRR-YGKEIDIWSAGVILY-ILLSGVPPFWAETEK 275
Y+ ++APE L R Y + D+WS GV+L+ I G P+ +
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
Query: 276 GIFDAILQGN 285
+F + +G+
Sbjct: 260 ELFKLLKEGH 269
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQYG +Y + A K++ + + + ++ +E +M
Sbjct: 6 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 61
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFD--RIIAKGHYSERAAASVFRDIMH 179
+ + PN+V+ G +I++E G L D R + S + I
Sbjct: 62 KEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G G+ + +
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKW 176
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 68 HYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD-DIKREVQIMQHLSG 126
H +LG+G +G + LC + G K+ S D+ D +RE+QI++ L
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 67
Query: 127 QPNIVEFKG-AYEDMRF-VHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVC 184
IV+++G +Y R + +VME G L D + RA R +++ +C
Sbjct: 68 D-FIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL-----QRHRARLDASRLLLYSSQIC 121
Query: 185 H------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGK---VYRDIVGSA- 234
++ VHRDL N L S A +K+ DFG + K V R+ S
Sbjct: 122 KGMEYLGSRRCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDXXVVREPGQSPI 178
Query: 235 YYVAPEVLRRR-YGKEIDIWSAGVILYILLS 264
++ APE L + ++ D+WS GV+LY L +
Sbjct: 179 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 35/262 (13%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRK- 104
LP P +E + T+GK LG G +G + + I+ ++ +V K
Sbjct: 24 LPEDPK------WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 105 LVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH 164
++ D D+ E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 78 DATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 165 YSERAAASV---------FRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENA 208
+ + F+D++ + ++ +HRDL N L T EN
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENN 194
Query: 209 IMKVTDFGFSFFFEEGKVYRDIVGS---AYYVAPEVL-RRRYGKEIDIWSAGVILY-ILL 263
+MK+ DFG + Y+ ++APE L R Y + D+WS GV+++ I
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 264 SGVPPFWAETEKGIFDAILQGN 285
G P+ + +F + +G+
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGH 276
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 113/269 (42%), Gaps = 30/269 (11%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEFK 134
+G G +G + G + ++ SK D D E++++ L PNI+
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 135 GAYEDMRFVHIVMELCADGELFDRI-------------IAKGHYSERAAASVFR---DIM 178
GA E ++++ +E G L D + IA S ++ + D+
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVY-RDIVG--SAY 235
++ K +HR+L N L EN + K+ DFG S +VY + +G
Sbjct: 150 RGMDYLSQKQFIHRNLAARNILV---GENYVAKIADFGLS---RGQEVYVKKTMGRLPVR 203
Query: 236 YVAPEVLRRR-YGKEIDIWSAGVILYILLS-GVPPFWAETEKGIFDAILQGNIDFDSAPW 293
++A E L Y D+WS GV+L+ ++S G P+ T +++ + QG +
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLEKP 260
Query: 294 PTISSGAKDLVRRMLTQDPKKRITAAEVL 322
DL+R+ + P +R + A++L
Sbjct: 261 LNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 29/250 (11%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLC--IENSTGRQFACKSVAKRKLVS---KTDRDDIKR 116
+E + +GK LG G +G + L I + VA + L S + D D+
Sbjct: 8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 67
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK-------------- 162
E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 127
Query: 163 --GHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF 220
S + S + + +K +HRDL N L T E+ +MK+ DFG +
Sbjct: 128 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARD 184
Query: 221 FEEGKVYRDIVGS---AYYVAPEVLRRR-YGKEIDIWSAGVILY-ILLSGVPPFWAETEK 275
Y+ ++APE L R Y + D+WS GV+L+ I G P+ +
Sbjct: 185 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 244
Query: 276 GIFDAILQGN 285
+F + +G+
Sbjct: 245 ELFKLLKEGH 254
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 29/250 (11%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLC--IENSTGRQFACKSVAKRKLVS---KTDRDDIKR 116
+E + +GK LG G +G + L I + VA + L S + D D+
Sbjct: 16 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 75
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK-------------- 162
E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 76 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 135
Query: 163 --GHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF 220
S + S + + +K +HRDL N L T E+ +MK+ DFG +
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARD 192
Query: 221 FEEGKVYRDIVGS---AYYVAPEVLRRR-YGKEIDIWSAGVILY-ILLSGVPPFWAETEK 275
Y+ ++APE L R Y + D+WS GV+L+ I G P+ +
Sbjct: 193 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 252
Query: 276 GIFDAILQGN 285
+F + +G+
Sbjct: 253 ELFKLLKEGH 262
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 29/250 (11%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLC--IENSTGRQFACKSVAKRKL---VSKTDRDDIKR 116
+E + +GK LG G +G + L I + VA + L ++ D D+
Sbjct: 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 123
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK-------------- 162
E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183
Query: 163 --GHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF 220
S + S + + +K +HRDL N L T E+ +MK+ DFG +
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARD 240
Query: 221 FEEGKVYRDIVGS---AYYVAPEVLRRR-YGKEIDIWSAGVILY-ILLSGVPPFWAETEK 275
Y+ ++APE L R Y + D+WS GV+L+ I G P+ +
Sbjct: 241 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 300
Query: 276 GIFDAILQGN 285
+F + +G+
Sbjct: 301 ELFKLLKEGH 310
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 372 IQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEF 431
IQ L F ++D D + +L DE + GLAKLG +L +++ + + D +G+GT+D EF
Sbjct: 36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Query: 432 ITATMQRHKLERFEHLYKAFQYFDKDNSGYITVDELETAFK-----EYNMGDDATIATIK 486
+ A R + AF D+ G +TVD+L + + G+ ++
Sbjct: 96 LRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLR 155
Query: 487 EIMSEVD-RDKDGRISYDEFR 506
+ D +KDG+++ EF+
Sbjct: 156 RFLDNFDSSEKDGQVTLAEFQ 176
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 29/250 (11%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLC--IENSTGRQFACKSVAKRKLVS---KTDRDDIKR 116
+E + +GK LG G +G + L I + VA + L S + D D+
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 82
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK-------------- 162
E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 142
Query: 163 --GHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF 220
S + S + + +K +HRDL N L T E+ +MK+ DFG +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARD 199
Query: 221 FEEGKVYRDIVGS---AYYVAPEVLRRR-YGKEIDIWSAGVILY-ILLSGVPPFWAETEK 275
Y+ ++APE L R Y + D+WS GV+L+ I G P+ +
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
Query: 276 GIFDAILQGN 285
+F + +G+
Sbjct: 260 ELFKLLKEGH 269
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 35/262 (13%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRK- 104
LP P +E + T+GK LG G +G + + I+ ++ +V K
Sbjct: 24 LPEDPK------WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 105 LVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH 164
++ D D+ E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 165 YSERAAASV---------FRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENA 208
+ + F+D++ + ++ +HRDL N L T EN
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENN 194
Query: 209 IMKVTDFGFSFFFEEGKVYRDIVGS---AYYVAPEVL-RRRYGKEIDIWSAGVILY-ILL 263
+MK+ DFG + Y+ ++APE L R Y + D+WS GV+++ I
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 264 SGVPPFWAETEKGIFDAILQGN 285
G P+ + +F + +G+
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGH 276
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKLVSKTDRD--DI 114
P + + H ++LG+G +G + +C ++++TG + VA +KL T+ D
Sbjct: 7 PTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTG-----EVVAVKKLQHSTEEHLRDF 61
Query: 115 KREVQIMQHLSGQPNIVEFKGAYEDM--RFVHIVMELCADGELFDRIIAKGHYSERAAAS 172
+RE++I++ L NIV++KG R + ++ME G L + + + ER
Sbjct: 62 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL---QKHKERIDH- 116
Query: 173 VFRDIMHVVNVCH------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF----E 222
+ + + +C TK +HRDL N L +EN + K+ DFG + E
Sbjct: 117 -IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKE 172
Query: 223 EGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILYILLSGV 266
KV ++ APE L ++ D+WS GV+LY L + +
Sbjct: 173 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 35/262 (13%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKL 105
LP P +E + T+GK LG G +G + + I+ ++ +V K
Sbjct: 16 LPEDPK------WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 69
Query: 106 -VSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH 164
++ D D+ E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 70 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 129
Query: 165 YSERAAASV---------FRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENA 208
+ + F+D++ + ++ +HRDL N L T EN
Sbjct: 130 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENN 186
Query: 209 IMKVTDFGFSFFFEEGKVYRDIVGS---AYYVAPEVL-RRRYGKEIDIWSAGVILY-ILL 263
+MK+ DFG + Y+ ++APE L R Y + D+WS GV+++ I
Sbjct: 187 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
Query: 264 SGVPPFWAETEKGIFDAILQGN 285
G P+ + +F + +G+
Sbjct: 247 LGGSPYPGIPVEELFKLLKEGH 268
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 35/262 (13%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKL 105
LP P +E + T+GK LG G +G + + I+ ++ +V K
Sbjct: 13 LPEDPK------WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 66
Query: 106 -VSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH 164
++ D D+ E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 67 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 126
Query: 165 YSERAAASV---------FRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENA 208
+ + F+D++ + ++ +HRDL N L T EN
Sbjct: 127 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENN 183
Query: 209 IMKVTDFGFSFFFEEGKVYRDIVGS---AYYVAPEVL-RRRYGKEIDIWSAGVILY-ILL 263
+MK+ DFG + Y+ ++APE L R Y + D+WS GV+++ I
Sbjct: 184 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
Query: 264 SGVPPFWAETEKGIFDAILQGN 285
G P+ + +F + +G+
Sbjct: 244 LGGSPYPGIPVEELFKLLKEGH 265
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 35/262 (13%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRKL 105
LP P +E + T+GK LG G +G + + I+ ++ +V K
Sbjct: 11 LPEDPK------WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 64
Query: 106 -VSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH 164
++ D D+ E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 65 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 124
Query: 165 YSERAAASV---------FRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENA 208
+ + F+D++ + ++ +HRDL N L T EN
Sbjct: 125 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVT---ENN 181
Query: 209 IMKVTDFGFSFFFEEGKVYRDIVGS---AYYVAPEVL-RRRYGKEIDIWSAGVILY-ILL 263
+MK+ DFG + Y+ ++APE L R Y + D+WS GV+++ I
Sbjct: 182 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
Query: 264 SGVPPFWAETEKGIFDAILQGN 285
G P+ + +F + +G+
Sbjct: 242 LGGSPYPGIPVEELFKLLKEGH 263
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 125/301 (41%), Gaps = 48/301 (15%)
Query: 64 DVKSHYTMG----KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQ 119
++KS YT +++G G++G ++ C++ G +A K +K+ L D + REV
Sbjct: 2 EMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVY 60
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK----GHYSERAAASVFR 175
L ++V + A+ + + I E C G L D I ++ E +
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
Query: 176 DIMHVVNVCHTKGVVHRDLKPENFLFT----------SNDE-----NAIM-KVTDFGFSF 219
+ + H+ +VH D+KP N + DE N +M K+ D G
Sbjct: 121 QVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 180
Query: 220 FFEEGKVYRDIVGSAYYVAPEVLRRRYGK--EIDIWSAGVILYILLSGVPPF------WA 271
+V G + ++A EVL+ Y + DI++ + + + +G P W
Sbjct: 181 RISSPQVEE---GDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWH 236
Query: 272 ETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESG 331
E +G I Q +S +L++ M+ DP++R +A +++H L +
Sbjct: 237 EIRQGRLPRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 285
Query: 332 K 332
+
Sbjct: 286 R 286
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 48/243 (19%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E + +GK LGRG +G + + C++VA + L + ++ + E+
Sbjct: 24 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 83
Query: 119 QIMQHLSGQPNIVEFKGAY-EDMRFVHIVMELCADGELFDRIIAKGH----YSERAAASV 173
+I+ H+ N+V GA + + +++E C G L + +K + Y E A +
Sbjct: 84 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKE-APEDL 142
Query: 174 FRDIMHVVN-VCH------------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF 220
++D + + + +C+ ++ +HRDL N L + E ++K+ DFG +
Sbjct: 143 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA-- 197
Query: 221 FEEGKVYRDIVGSAYYV------------APE-VLRRRYGKEIDIWSAGVILYILLS-GV 266
RDI YV APE + R Y + D+WS GV+L+ + S G
Sbjct: 198 -------RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 250
Query: 267 PPF 269
P+
Sbjct: 251 SPY 253
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 35/262 (13%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRK- 104
LP P +E + T+GK LG G +G + + I+ ++ +V K
Sbjct: 24 LPEDPK------WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 105 LVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH 164
++ D D+ E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 165 YSERAAASV---------FRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENA 208
+ + F+D++ + ++ +HRDL N L T EN
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENN 194
Query: 209 IMKVTDFGFSFFFEEGKVYRDIVGS---AYYVAPEVL-RRRYGKEIDIWSAGVILY-ILL 263
+M++ DFG + Y+ ++APE L R Y + D+WS GV+++ I
Sbjct: 195 VMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 264 SGVPPFWAETEKGIFDAILQGN 285
G P+ + +F + +G+
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGH 276
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 124/300 (41%), Gaps = 48/300 (16%)
Query: 65 VKSHYTMG----KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQI 120
+KS YT +++G G++G ++ C++ G +A K +K+ L D + REV
Sbjct: 5 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYA 63
Query: 121 MQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK----GHYSERAAASVFRD 176
L ++V + A+ + + I E C G L D I ++ E +
Sbjct: 64 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 123
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFT----------SNDE-----NAIM-KVTDFGFSFF 220
+ + H+ +VH D+KP N + DE N +M K+ D G
Sbjct: 124 VGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 183
Query: 221 FEEGKVYRDIVGSAYYVAPEVLRRRYGK--EIDIWSAGVILYILLSGVPPF------WAE 272
+V G + ++A EVL+ Y + DI++ + + + +G P W E
Sbjct: 184 ISSPQVEE---GDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHE 239
Query: 273 TEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+G I Q +S +L++ M+ DP++R +A +++H L + +
Sbjct: 240 IRQGRLPRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 288
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 367 LPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTI 426
L E+ Q++ E F+ D +N+G L Y ELK LG L + +I + D +G
Sbjct: 17 LLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLX 76
Query: 427 DYIEFITATMQR-HKLERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATI 485
Y +F ++ K + + + +AFQ FD D++G I++ L KE +G+ T +
Sbjct: 77 KYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKE--LGETLTDEEL 134
Query: 486 KEIMSEVDRDKDGRISYDEFRAM 508
+ + E D D DG I+ +EF A+
Sbjct: 135 RAXIEEFDLDGDGEINENEFIAI 157
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 124/300 (41%), Gaps = 48/300 (16%)
Query: 65 VKSHYTMG----KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQI 120
+KS YT +++G G++G ++ C++ G +A K +K+ L D + REV
Sbjct: 3 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYA 61
Query: 121 MQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK----GHYSERAAASVFRD 176
L ++V + A+ + + I E C G L D I ++ E +
Sbjct: 62 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFT----------SNDE-----NAIM-KVTDFGFSFF 220
+ + H+ +VH D+KP N + DE N +M K+ D G
Sbjct: 122 VGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 181
Query: 221 FEEGKVYRDIVGSAYYVAPEVLRRRYGK--EIDIWSAGVILYILLSGVPPF------WAE 272
+V G + ++A EVL+ Y + DI++ + + + +G P W E
Sbjct: 182 ISSPQVEE---GDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHE 237
Query: 273 TEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+G I Q +S +L++ M+ DP++R +A +++H L + +
Sbjct: 238 IRQGRLPRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 286
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 124/300 (41%), Gaps = 48/300 (16%)
Query: 65 VKSHYTMG----KELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQI 120
+KS YT +++G G++G ++ C++ G +A K +K+ L D + REV
Sbjct: 1 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYA 59
Query: 121 MQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK----GHYSERAAASVFRD 176
L ++V + A+ + + I E C G L D I ++ E +
Sbjct: 60 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 119
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFT----------SNDE-----NAIM-KVTDFGFSFF 220
+ + H+ +VH D+KP N + DE N +M K+ D G
Sbjct: 120 VGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 179
Query: 221 FEEGKVYRDIVGSAYYVAPEVLRRRYGK--EIDIWSAGVILYILLSGVPPF------WAE 272
+V G + ++A EVL+ Y + DI++ + + + +G P W E
Sbjct: 180 ISSPQVEE---GDSRFLANEVLQENYTHLPKADIFALALTV-VXAAGAEPLPRNGDQWHE 235
Query: 273 TEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKESGK 332
+G I Q +S +L++ M+ DP++R +A +++H L + +
Sbjct: 236 IRQGRLPRIPQ-----------VLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 284
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 123/289 (42%), Gaps = 67/289 (23%)
Query: 74 ELGRGQYGIIYL--CIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIV 131
ELG G +G ++L C + +V K S++ R D +RE +++ L Q +IV
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQ-HIV 106
Query: 132 EFKGAYEDMRFVHIVMELCADGEL--FDR-------IIAKGH---------------YSE 167
F G + R + +V E G+L F R ++A G S+
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 168 RAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVY 227
AA V+ +H V HRDL N L + ++K+ DFG S
Sbjct: 167 VAAGMVYLAGLHFV---------HRDLATRNCLV---GQGLVVKIGDFGMS--------- 205
Query: 228 RDIVGSAYY------------VAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAET 273
RDI + YY + PE +L R++ E D+WS GV+L+ I G P++ +
Sbjct: 206 RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 265
Query: 274 EKGIFDAILQG-NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEV 321
D I QG ++ A P + + ++R ++P++R + +V
Sbjct: 266 NTEAIDCITQGRELERPRACPPEVYA----IMRGCWQREPQQRHSIKDV 310
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V HY +G+ +G G +G+I+ +Q A K +R + RD+ R +++
Sbjct: 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQL-RDEY-RTYKLLAGC 65
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADGE-LFDRIIAKGHYSERAAASVFRDIMHVVNV 183
+G PN+ F E + V ++ L E L D + +S + A + ++ V
Sbjct: 66 TGIPNVYYF--GQEGLHNVLVIDLLGPSLEDLLD--LCGRKFSVKTVAMAAKQMLARVQS 121
Query: 184 CHTKGVVHRDLKPENFLF-TSNDENAIM-KVTDFGFSFFFEEGKV-----YR---DIVGS 233
H K +V+RD+KP+NFL N +NA M V DFG F+ + YR ++ G+
Sbjct: 122 IHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT 181
Query: 234 AYYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPF 269
A Y++ L R + D+ + G + L G P+
Sbjct: 182 ARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 218
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 114/286 (39%), Gaps = 43/286 (15%)
Query: 19 GSTSQANTGVVHNRRIQEPAAPEAQFSGPEPLPHS--PDTILGKPYED--VKSHYTMGKE 74
GS+ +A HN Q + Q HS P + +P+ D + Y +
Sbjct: 1 GSSHEAAAAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHL 60
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNI---- 130
+G G YG + + R A K + R D I RE+ I+ L+ +
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKIL-RVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 131 VEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVV 190
+ E +++V+E+ AD + + +E ++ +++ V H+ G++
Sbjct: 120 IVIPKDVEKFDELYVVLEI-ADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGIL 178
Query: 191 HRDLKPENFLFTSNDENAIMKVTDFGFS-------------------------FFFEEGK 225
HRDLKP N L +++ +KV DFG + F
Sbjct: 179 HRDLKPANCLV---NQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKN 235
Query: 226 VYRDIVG---SAYYVAPEV--LRRRYGKEIDIWSAGVILYILLSGV 266
+ R + G + +Y APE+ L+ Y + ID+WS G I LL+ +
Sbjct: 236 LKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 293 WPTISSGAKDLVRRMLTQDPKKRITAAEVLEHPWLKE 329
+P S+ A L++RML +P KRIT E L HP+ KE
Sbjct: 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V HY +G+ +G G +G+I+ +Q A K +R + RD+ R +++
Sbjct: 7 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQL-RDEY-RTYKLLAGC 64
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADGE-LFDRIIAKGHYSERAAASVFRDIMHVVNV 183
+G PN+ F E + V ++ L E L D + +S + A + ++ V
Sbjct: 65 TGIPNVYYF--GQEGLHNVLVIDLLGPSLEDLLD--LCGRKFSVKTVAMAAKQMLARVQS 120
Query: 184 CHTKGVVHRDLKPENFLF-TSNDENAIM-KVTDFGFSFFFEEGKV-----YR---DIVGS 233
H K +V+RD+KP+NFL N +NA M V DFG F+ + YR ++ G+
Sbjct: 121 IHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT 180
Query: 234 AYYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPF 269
A Y++ L R + D+ + G + L G P+
Sbjct: 181 ARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 217
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 35/262 (13%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRK- 104
LP P +E + T+GK LG G +G + + I+ ++ +V K
Sbjct: 24 LPEDPK------WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 105 LVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH 164
++ D D+ E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 165 YSERAAASV---------FRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENA 208
+ + F+D++ + ++ +HRDL N L T EN
Sbjct: 138 PGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENN 194
Query: 209 IMKVTDFGFSFFFEEGKVYRDIVGS---AYYVAPEVL-RRRYGKEIDIWSAGVILY-ILL 263
+MK+ DFG + + ++APE L R Y + D+WS GV+++ I
Sbjct: 195 VMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 264 SGVPPFWAETEKGIFDAILQGN 285
G P+ + +F + +G+
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGH 276
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 29/250 (11%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLC--IENSTGRQFACKSVAKRKLVS---KTDRDDIKR 116
+E + +GK LG G +G + L I + VA + L S + D D+
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS 82
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK-------------- 162
E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHN 142
Query: 163 --GHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFS-- 218
S + S + + +K +HRDL N L T E+ +MK+ DFG +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARD 199
Query: 219 -FFFEEGKVYRDIVGSAYYVAPEVL-RRRYGKEIDIWSAGVILY-ILLSGVPPFWAETEK 275
+ K + ++APE L R Y + D+WS GV+L+ I G P+ +
Sbjct: 200 IHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
Query: 276 GIFDAILQGN 285
+F + +G+
Sbjct: 260 ELFKLLKEGH 269
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIM 121
+E ++ TM +LG GQ+G +Y + A K++ + + + ++ +E +M
Sbjct: 6 WEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 61
Query: 122 QHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFD--RIIAKGHYSERAAASVFRDIMH 179
+ + PN+V+ G +I+ E G L D R + S + I
Sbjct: 62 KEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 180 VVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSAY---Y 236
+ K +HRDL N L EN ++KV DFG S G G+ + +
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKW 176
Query: 237 VAPEVLR-RRYGKEIDIWSAGVILY-ILLSGVPPF 269
APE L ++ + D+W+ GV+L+ I G+ P+
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 35/262 (13%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRK- 104
LP P +E + T+GK LG G +G + + I+ ++ +V K
Sbjct: 24 LPEDPK------WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 105 LVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH 164
++ D D+ E+++M+ + NI+ GA +++++ + G L + + A+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRP 137
Query: 165 YSERAAASV---------FRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENA 208
+ + F+D++ + ++ +HRDL N L T EN
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENN 194
Query: 209 IMKVTDFGFSFFFEEGKVYRDIVGS---AYYVAPEVL-RRRYGKEIDIWSAGVILY-ILL 263
+MK+ DFG + Y+ ++APE L R Y + D+WS GV+++ I
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 264 SGVPPFWAETEKGIFDAILQGN 285
G P+ + +F + +G+
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGH 276
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 123/289 (42%), Gaps = 67/289 (23%)
Query: 74 ELGRGQYGIIYL--CIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIV 131
ELG G +G ++L C + +V K S++ R D +RE +++ L Q +IV
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQ-HIV 77
Query: 132 EFKGAYEDMRFVHIVMELCADGEL--FDR-------IIAKGH---------------YSE 167
F G + R + +V E G+L F R ++A G S+
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 168 RAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVY 227
AA V+ +H V HRDL N L + ++K+ DFG S
Sbjct: 138 VAAGMVYLAGLHFV---------HRDLATRNCLV---GQGLVVKIGDFGMS--------- 176
Query: 228 RDIVGSAYY------------VAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAET 273
RDI + YY + PE +L R++ E D+WS GV+L+ I G P++ +
Sbjct: 177 RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 236
Query: 274 EKGIFDAILQG-NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEV 321
D I QG ++ A P + + ++R ++P++R + +V
Sbjct: 237 NTEAIDCITQGRELERPRACPPEVYA----IMRGCWQREPQQRHSIKDV 281
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 123/289 (42%), Gaps = 67/289 (23%)
Query: 74 ELGRGQYGIIYL--CIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIV 131
ELG G +G ++L C + +V K S++ R D +RE +++ L Q +IV
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQ-HIV 83
Query: 132 EFKGAYEDMRFVHIVMELCADGEL--FDR-------IIAKGH---------------YSE 167
F G + R + +V E G+L F R ++A G S+
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 168 RAAASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVY 227
AA V+ +H V HRDL N L + ++K+ DFG S
Sbjct: 144 VAAGMVYLAGLHFV---------HRDLATRNCLV---GQGLVVKIGDFGMS--------- 182
Query: 228 RDIVGSAYY------------VAPE-VLRRRYGKEIDIWSAGVILY-ILLSGVPPFWAET 273
RDI + YY + PE +L R++ E D+WS GV+L+ I G P++ +
Sbjct: 183 RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 242
Query: 274 EKGIFDAILQG-NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEV 321
D I QG ++ A P + + ++R ++P++R + +V
Sbjct: 243 NTEAIDCITQGRELERPRACPPEVYA----IMRGCWQREPQQRHSIKDV 287
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 369 TEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDY 428
I+ + E F ++DT++NG+LS+ E+ LA +G + + DI + +QA DI+ G I Y
Sbjct: 35 NNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDINDRGNITY 92
Query: 429 IEFITATMQRHKLERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGD---DATIATI 485
EF+ + +E L AF DKD GYI+ ++ + + + + D ++
Sbjct: 93 TEFMAGCYRWKNIES-TFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSV 151
Query: 486 KEIMSEVDRDK-DGRISYDEFRAMMKS 511
I + R+ +IS+ EF+ M S
Sbjct: 152 HSIKKGIPREHIINKISFQEFKDYMLS 178
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 104/274 (37%), Gaps = 52/274 (18%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTD---RDDIKREV 118
+E + + GK LG G +G + + VA + L K D R+ + E+
Sbjct: 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSEL 99
Query: 119 QIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHY------------- 165
++M L NIV GA ++++ E C G+L + + +K
Sbjct: 100 KMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKR 159
Query: 166 ---SERAAASVFRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDF 215
E F D++ + K VHRDL N L T ++K+ DF
Sbjct: 160 LEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVT---HGKVVKICDF 216
Query: 216 GFSFFFEEGKVYRDIVGSAYYV------------APEVLRRR-YGKEIDIWSAGVILYIL 262
G + RDI+ + YV APE L Y + D+WS G++L+ +
Sbjct: 217 GLA---------RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
Query: 263 LS-GVPPFWAETEKGIFDAILQGNIDFDSAPWPT 295
S GV P+ F ++Q D + T
Sbjct: 268 FSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYAT 301
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 46/242 (19%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E + +GK LGRG +G + + C++VA + L + ++ + E+
Sbjct: 22 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 81
Query: 119 QIMQHLSGQPNIVEFKGAY-EDMRFVHIVMELCADGELFDRIIAKGHY---SERAAASVF 174
+I+ H+ N+V GA + + +++E C G L + +K + + A ++
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141
Query: 175 RDIMHVVN-VCH------------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF 221
+D + + + +C+ ++ +HRDL N L + E ++K+ DFG +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA--- 195
Query: 222 EEGKVYRDIVGSAYYV------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVP 267
RDI YV APE + R Y + D+WS GV+L+ + S G
Sbjct: 196 ------RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
Query: 268 PF 269
P+
Sbjct: 250 PY 251
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 35/262 (13%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRK- 104
LP P +E + T+GK LG G +G + + I+ ++ +V K
Sbjct: 24 LPEDPK------WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 105 LVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH 164
++ D D+ E+++M+ + NI+ GA +++++ + G L + + A+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRP 137
Query: 165 YSERAAASV---------FRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENA 208
+ + F+D++ + ++ +HRDL N L T EN
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENN 194
Query: 209 IMKVTDFGFSFFFEEGKVYRDIVGS---AYYVAPEVL-RRRYGKEIDIWSAGVILY-ILL 263
+MK+ DFG + Y+ ++APE L R Y + D+WS GV+++ I
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 264 SGVPPFWAETEKGIFDAILQGN 285
G P+ + +F + +G+
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGH 276
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 35/262 (13%)
Query: 50 LPHSPDTILGKPYEDVKSHYTMGKELGRGQYGIIYLC----IENSTGRQFACKSVAKRK- 104
LP P +E + T+GK LG G +G + + I+ ++ +V K
Sbjct: 24 LPEDPK------WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 105 LVSKTDRDDIKREVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGH 164
++ D D+ E+++M+ + NI+ GA +++++E + G L + + A+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 165 YSERAAASV---------FRDIMHV-------VNVCHTKGVVHRDLKPENFLFTSNDENA 208
+ + F+D++ + ++ +HRDL N L T EN
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENN 194
Query: 209 IMKVTDFGFSFFFEEGKVYRDIVGS---AYYVAPEVL-RRRYGKEIDIWSAGVILY-ILL 263
+MK+ DFG + + ++APE L R Y + D+WS GV+++ I
Sbjct: 195 VMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 264 SGVPPFWAETEKGIFDAILQGN 285
G P+ + +F + +G+
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGH 276
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E + +GK LGRG +G + + C++VA + L + ++ + E+
Sbjct: 22 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 81
Query: 119 QIMQHLSGQPNIVEFKGAY-EDMRFVHIVMELCADGELFDRIIAKGHY---SERAAASVF 174
+I+ H+ N+V GA + + +++E C G L + +K + + A ++
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141
Query: 175 RDIMHVVN-VCH------------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSF-F 220
+D + + + +C+ ++ +HRDL N L + E ++K+ DFG +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDI 198
Query: 221 FEEGKVYR--DIVGSAYYVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPF 269
+++ R D ++APE + R Y + D+WS GV+L+ + S G P+
Sbjct: 199 YKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 60.1 bits (144), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 369 TEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDY 428
T +++E F D DN+G +S +EL + L LG T +++ G ++
Sbjct: 1 TASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNA 52
Query: 429 IEFITATMQ-------RHKLERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDAT 481
EF AT + + E+ + + AF+ DK+ +G I EL N+GD T
Sbjct: 53 KEFDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLL--LNLGDALT 110
Query: 482 IATIKEIMSEVDRDKDGRISYDEFRAMMKSGTHL 515
+ ++E+M EV DG I+Y+ F M+ +G L
Sbjct: 111 SSEVEELMKEVSVSGDGAINYESFVDMLVTGYPL 144
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 368 PTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTID 427
PTE+ +++ + F +D + NGT+ EL+ L LG LT S++++ M+ + G+G I+
Sbjct: 71 PTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAIN 130
Query: 428 YIEFI 432
Y F+
Sbjct: 131 YESFV 135
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 46/242 (19%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E + +GK LGRG +G + + C++VA + L + ++ + E+
Sbjct: 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 118
Query: 119 QIMQHLSGQPNIVEFKGAY-EDMRFVHIVMELCADGELFDRIIAKGHY---SERAAASVF 174
+I+ H+ N+V GA + + +++E C G L + +K + + A ++
Sbjct: 119 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 178
Query: 175 RDIMHVVN-VCH------------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF 221
+D + + + +C+ ++ +HRDL N L + E ++K+ DFG +
Sbjct: 179 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA--- 232
Query: 222 EEGKVYRDIVGSAYYV------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVP 267
RDI YV APE + R Y + D+WS GV+L+ + S G
Sbjct: 233 ------RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 286
Query: 268 PF 269
P+
Sbjct: 287 PY 288
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 108/241 (44%), Gaps = 45/241 (18%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E + +GK LGRG +G + + C++VA + L + ++ + E+
Sbjct: 23 WEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 82
Query: 119 QIMQHLSGQPNIVEFKGAY-EDMRFVHIVMELCADGELFDRIIAKGH--YSERAAASVFR 175
+I+ H+ N+V GA + + +++E C G L + +K + + +++
Sbjct: 83 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYK 142
Query: 176 DIMHVVN-VCH------------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFE 222
D + + + +C+ ++ +HRDL N L + E ++K+ DFG +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA---- 195
Query: 223 EGKVYRDIV--------GSAY----YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPP 268
RDI G A ++APE + R Y + D+WS GV+L+ + S G P
Sbjct: 196 -----RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 269 F 269
+
Sbjct: 251 Y 251
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 18/206 (8%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G +G + + +Q ++ K D +++ RE QIM L P IV
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD-NPYIVRL 75
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV----CHTKGV 189
G + + +VME+ G L ++ K E S +++H V++ K
Sbjct: 76 IGVCQ-AEALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA----YYVAPEVLR-R 244
VHRDL N L + K++DFG S Y + + APE + R
Sbjct: 132 VHRDLAARNVLLVNRH---YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 245 RYGKEIDIWSAGVILYILLS-GVPPF 269
++ D+WS GV ++ LS G P+
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 46/242 (19%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E + +GK LGRG +G + + C++VA + L + ++ + E+
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 119 QIMQHLSGQPNIVEFKGAY-EDMRFVHIVMELCADGELFDRIIAKGHY---SERAAASVF 174
+I+ H+ N+V GA + + ++ E C G L + +K + + A ++
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 175 RDIMHVVN-VCH------------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF 221
+D + + + +C+ ++ +HRDL N L + E ++K+ DFG +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA--- 186
Query: 222 EEGKVYRDIVGSAYYV------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVP 267
RDI YV APE + R Y + D+WS GV+L+ + S G
Sbjct: 187 ------RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 240
Query: 268 PF 269
P+
Sbjct: 241 PY 242
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 46/242 (19%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E + +GK LGRG +G + + C++VA + L + ++ + E+
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 119 QIMQHLSGQPNIVEFKGAY-EDMRFVHIVMELCADGELFDRIIAKGHY---SERAAASVF 174
+I+ H+ N+V GA + + ++ E C G L + +K + + A ++
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 175 RDIMHVVN-VCH------------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF 221
+D + + + +C+ ++ +HRDL N L + E ++K+ DFG +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA--- 186
Query: 222 EEGKVYRDIVGSAYYV------------APE-VLRRRYGKEIDIWSAGVILYILLS-GVP 267
RDI YV APE + R Y + D+WS GV+L+ + S G
Sbjct: 187 ------RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 240
Query: 268 PF 269
P+
Sbjct: 241 PY 242
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 21/218 (9%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRD--DIKREVQ 119
+E S + +G G +G +Y G+ +V K+V T + EV
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVY------KGKWHGDVAVKILKVVDPTPEQFQAFRNEVA 84
Query: 120 IMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRI-IAKGHYSERAAASVFRDIM 178
+++ + NI+ F G Y + IV + C L+ + + + + + R
Sbjct: 85 VLRK-TRHVNILLFMG-YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTA 142
Query: 179 HVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF---FEEGKVYRDIVGSAY 235
++ H K ++HRD+K N E +K+ DFG + + + GS
Sbjct: 143 QGMDYLHAKNIIHRDMKSNNIFL---HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL 199
Query: 236 YVAPEVLRRR----YGKEIDIWSAGVILYILLSGVPPF 269
++APEV+R + + + D++S G++LY L++G P+
Sbjct: 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 46/242 (19%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E + +GK LGRG +G + + C++VA + L + ++ + E+
Sbjct: 22 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 81
Query: 119 QIMQHLSGQPNIVEFKGAY-EDMRFVHIVMELCADGELFDRIIAKGHY---SERAAASVF 174
+I+ H+ N+V GA + + +++E C G L + +K + + A ++
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141
Query: 175 RDIMHVVN-VCH------------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF 221
+D + + + +C+ ++ +HRDL N L + E ++K+ DFG +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA--- 195
Query: 222 EEGKVYRDIV--------GSAY----YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVP 267
RDI G A ++APE + R Y + D+WS GV+L+ + S G
Sbjct: 196 ------RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
Query: 268 PF 269
P+
Sbjct: 250 PY 251
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 18/206 (8%)
Query: 74 ELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVEF 133
ELG G +G + + +Q ++ K D +++ RE QIM L P IV
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD-NPYIVRL 401
Query: 134 KGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNV----CHTKGV 189
G + + +VME+ G L ++ K E S +++H V++ K
Sbjct: 402 IGVCQAEALM-LVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEKNF 457
Query: 190 VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDIVGSA----YYVAPEVLR-R 244
VHR+L N L + K++DFG S Y + + APE + R
Sbjct: 458 VHRNLAARNVLLVNRH---YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 245 RYGKEIDIWSAGVILYILLS-GVPPF 269
++ D+WS GV ++ LS G P+
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQKPY 540
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 46/242 (19%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E + +GK LGRG +G + + C++VA + L + ++ + E+
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 119 QIMQHLSGQPNIVEFKGAY-EDMRFVHIVMELCADGELFDRIIAKGHY---SERAAASVF 174
+I+ H+ N+V GA + + +++E C G L + +K + + A ++
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 175 RDIMHVVN-VCH------------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF 221
+D + + + +C+ ++ +HRDL N L + E ++K+ DFG +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA--- 186
Query: 222 EEGKVYRDIV--------GSAY----YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVP 267
RDI G A ++APE + R Y + D+WS GV+L+ + S G
Sbjct: 187 ------RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 240
Query: 268 PF 269
P+
Sbjct: 241 PY 242
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 108/242 (44%), Gaps = 46/242 (19%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E + +GK LGRG +G + + C++VA + L + ++ + E+
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 119 QIMQHLSGQPNIVEFKGAY-EDMRFVHIVMELCADGELFDRIIAKGHY---SERAAASVF 174
+I+ H+ N+V GA + + ++ E C G L + +K + + A ++
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 175 RDIMHVVN-VCH------------TKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFF 221
+D + + + +C+ ++ +HRDL N L + E ++K+ DFG +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA--- 186
Query: 222 EEGKVYRDIV--------GSAY----YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVP 267
RDI G A ++APE + R Y + D+WS GV+L+ + S G
Sbjct: 187 ------RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 240
Query: 268 PF 269
P+
Sbjct: 241 PY 242
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V + Y +G+++G G +G IYL + + G + A K KT + E +I + +
Sbjct: 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC-----VKTKHPQLHIESKIYKMM 61
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADG--ELFDRIIAKGHYSERAAASVFRDIMHVVN 182
G I + + + +VMEL +LF+ K +S + + ++ +
Sbjct: 62 QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIE 119
Query: 183 VCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVY--------RDIVGSA 234
H+K +HRD+KP+NFL + ++ + DFG + + + + + +++ G+A
Sbjct: 120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA 179
Query: 235 YYVAPEV-LRRRYGKEIDIWSAG-VILYILLSGVP 267
Y + L + D+ S G V++Y L +P
Sbjct: 180 RYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLP 214
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V + Y +G+++G G +G IYL + + G + A K KT + E +I + +
Sbjct: 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC-----VKTKHPQLHIESKIYKMM 59
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADG--ELFDRIIAKGHYSERAAASVFRDIMHVVN 182
G I + + + +VMEL +LF+ K +S + + ++ +
Sbjct: 60 QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIE 117
Query: 183 VCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVY--------RDIVGSA 234
H+K +HRD+KP+NFL + ++ + DFG + + + + + +++ G+A
Sbjct: 118 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA 177
Query: 235 YYVAPEV-LRRRYGKEIDIWSAG-VILYILLSGVP 267
Y + L + D+ S G V++Y L +P
Sbjct: 178 RYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLP 212
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 59/208 (28%)
Query: 177 IMHVVNVCHTKGVVHRDLKPENFLFTSND----------------ENAIMKVTDFGFSFF 220
+ V H + H DLKPEN LF ++D ++ ++V DFG + F
Sbjct: 146 LCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF 205
Query: 221 FEEGKVYRDIVGSAYYVAPEV-LRRRYGKEIDIWSAGVILYILLSGVPPFWAETEK---G 276
E + IV + +Y APEV L + + D+WS G I++ G F +
Sbjct: 206 DHEH--HSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLA 263
Query: 277 IFDAIL------------------QGNIDFD--SAPWPTISSGAK--------------- 301
+ + IL +G +D+D ++ + K
Sbjct: 264 MMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQ 323
Query: 302 --DLVRRMLTQDPKKRITAAEVLEHPWL 327
DL+ ML +P KR+T E L+HP+
Sbjct: 324 LFDLIESMLEYEPAKRLTLGEALQHPFF 351
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 12/157 (7%)
Query: 364 VENLPTEEIQKLKEKFTEMDT-DNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDG 422
V L + +++ L+ F + +T + +G +S D++ L LG T+S I+Q + D G
Sbjct: 4 VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFG 63
Query: 423 NGTIDYIEF--ITATMQRHKL---ERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMG 477
NG ID+ F I A ++ + + L +AF+ +DK+ +GYI+ D + E
Sbjct: 64 NGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAEL--- 120
Query: 478 DDATIAT--IKEIMSEVDRDKDGRISYDEFRAMMKSG 512
D T+++ + ++ E+D D G + ++EF +M G
Sbjct: 121 -DETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGG 156
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 94/233 (40%), Gaps = 40/233 (17%)
Query: 74 ELGRGQYGIIYLCIEN-STGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHLSGQPNIVE 132
++G G + +YL G + + +A + L+ + I E+Q + GQ N++
Sbjct: 28 KIGEGTFSSVYLATAQLQVGPE---EKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMG 84
Query: 133 FKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHR 192
K + V I M + E F I+ + E ++ + H G+VHR
Sbjct: 85 VKYCFRKNDHVVIAMPY-LEHESFLDILNSLSFQE--VREYMLNLFKALKRIHQFGIVHR 141
Query: 193 DLKPENFLFTSNDENAIMKVTDFGFS------------FFFEEGKVYR------------ 228
D+KP NFL+ N + DFG + F E + R
Sbjct: 142 DVKPSNFLY--NRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSR 199
Query: 229 -----DIVGSAYYVAPEVLRRRYGK--EIDIWSAGVILYILLSGVPPFWAETE 274
G+ + APEVL + + ID+WSAGVI LLSG PF+ ++
Sbjct: 200 RQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD 252
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 119/289 (41%), Gaps = 48/289 (16%)
Query: 49 PLPHSPDTILGK--PYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLV 106
P SP + L + P + V Y + + G G IYL ++ R + V + LV
Sbjct: 60 PYCGSPYSFLPQLNPGDIVAGQYEVKGCIAHGGLGWIYLALD----RNVNGRPVVLKGLV 115
Query: 107 SKTDRDDIKREVQIMQHLSG--QPNIVEFKGAYEDM-----RFVHIVMELCADGELFDRI 159
D + + Q L+ P+IV+ E +IVME G+ R
Sbjct: 116 HSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVG-GQSLKR- 173
Query: 160 IAKGHYSERA-AASVFRDIMHVVNVCHTKGVVHRDLKPENFLFTSN-----DENAIMKVT 213
+KG A A + +I+ ++ H+ G+V+ DLKPEN + T D A+ ++
Sbjct: 174 -SKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRIN 232
Query: 214 DFGFSFFFEEGKVYRDIVGSAYYVAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAET 273
FG+ + G+ + APE++R DI++ G L L +P
Sbjct: 233 SFGYLY------------GTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRY 280
Query: 274 EKGIF--DAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAE 320
G+ D +L+ +DS L+RR + DP++R T AE
Sbjct: 281 VDGLPEDDPVLK---TYDS---------YGRLLRRAIDPDPRQRFTTAE 317
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 120/292 (41%), Gaps = 39/292 (13%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E ++ + GK LG G +G + + A +VA + L T+R+ + E+
Sbjct: 41 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 100
Query: 119 QIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFR- 175
+++ +L NIV GA ++ E C G+L + + K + + ++
Sbjct: 101 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 160
Query: 176 ---------------DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF 220
+ + +K +HRDL N L T I K+ DFG +
Sbjct: 161 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLARH 217
Query: 221 FEEGKVYRDIVGSAY----YVAPE-VLRRRYGKEIDIWSAGVILYILLS-GVPPFWA-ET 273
+ Y + G+A ++APE + Y E D+WS G+ L+ L S G P+
Sbjct: 218 IKNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 276
Query: 274 EKGIFDAILQG--NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
+ + I +G + + AP + D+++ DP KR T ++++
Sbjct: 277 DSKFYKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 65 VKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQHL 124
V + Y +G+++G G +G IYL ++G + A K KT + E + + +
Sbjct: 7 VGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLEC-----VKTKHPQLHIESKFYKMM 61
Query: 125 SGQPNIVEFKGAYEDMRFVHIVMELCADG--ELFDRIIAKGHYSERAAASVFRDIMHVVN 182
G I K + + +VMEL +LF+ K +S + + ++ +
Sbjct: 62 QGGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIE 119
Query: 183 VCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVY--------RDIVGSA 234
H+K +HRD+KP+NFL + ++ + DFG + + + + + +++ G+A
Sbjct: 120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA 179
Query: 235 YYVAPEV-LRRRYGKEIDIWSAG-VILYILLSGVP 267
Y + L + D+ S G V++Y L +P
Sbjct: 180 RYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLP 214
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 118/300 (39%), Gaps = 55/300 (18%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E ++ + GK LG G +G + + A +VA + L T+R+ + E+
Sbjct: 41 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 100
Query: 119 QIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFR- 175
+++ +L NIV GA ++ E C G+L + + K + + ++
Sbjct: 101 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 160
Query: 176 ---------------DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF 220
+ + +K +HRDL N L T I K+ DFG +
Sbjct: 161 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLA-- 215
Query: 221 FEEGKVYRDIVGSAYYV------------APE-VLRRRYGKEIDIWSAGVILYILLS-GV 266
RDI + YV APE + Y E D+WS G+ L+ L S G
Sbjct: 216 -------RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 268
Query: 267 PPFWA-ETEKGIFDAILQG--NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
P+ + + I +G + + AP + D+++ DP KR T ++++
Sbjct: 269 SPYPGMPVDSKFYKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 118/300 (39%), Gaps = 55/300 (18%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E ++ + GK LG G +G + + A +VA + L T+R+ + E+
Sbjct: 18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 77
Query: 119 QIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFR- 175
+++ +L NIV GA ++ E C G+L + + K + + ++
Sbjct: 78 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 137
Query: 176 ---------------DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF 220
+ + +K +HRDL N L T I K+ DFG +
Sbjct: 138 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLA-- 192
Query: 221 FEEGKVYRDIVGSAYYV------------APE-VLRRRYGKEIDIWSAGVILYILLS-GV 266
RDI + YV APE + Y E D+WS G+ L+ L S G
Sbjct: 193 -------RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 245
Query: 267 PPFWA-ETEKGIFDAILQG--NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
P+ + + I +G + + AP + D+++ DP KR T ++++
Sbjct: 246 SPYPGMPVDSKFYKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 118/300 (39%), Gaps = 55/300 (18%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E ++ + GK LG G +G + + A +VA + L T+R+ + E+
Sbjct: 34 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 93
Query: 119 QIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFR- 175
+++ +L NIV GA ++ E C G+L + + K + + ++
Sbjct: 94 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 153
Query: 176 ---------------DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF 220
+ + +K +HRDL N L T I K+ DFG +
Sbjct: 154 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLA-- 208
Query: 221 FEEGKVYRDIVGSAYYV------------APE-VLRRRYGKEIDIWSAGVILYILLS-GV 266
RDI + YV APE + Y E D+WS G+ L+ L S G
Sbjct: 209 -------RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 261
Query: 267 PPFWA-ETEKGIFDAILQG--NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
P+ + + I +G + + AP + D+++ DP KR T ++++
Sbjct: 262 SPYPGMPVDSKFYKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 118/300 (39%), Gaps = 55/300 (18%)
Query: 62 YEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKL---VSKTDRDDIKREV 118
+E ++ + GK LG G +G + + A +VA + L T+R+ + E+
Sbjct: 36 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 95
Query: 119 QIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAK--GHYSERAAASVFR- 175
+++ +L NIV GA ++ E C G+L + + K + + ++
Sbjct: 96 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 155
Query: 176 ---------------DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGFSFF 220
+ + +K +HRDL N L T I K+ DFG +
Sbjct: 156 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLA-- 210
Query: 221 FEEGKVYRDIVGSAYYV------------APE-VLRRRYGKEIDIWSAGVILYILLS-GV 266
RDI + YV APE + Y E D+WS G+ L+ L S G
Sbjct: 211 -------RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 263
Query: 267 PPFWA-ETEKGIFDAILQG--NIDFDSAPWPTISSGAKDLVRRMLTQDPKKRITAAEVLE 323
P+ + + I +G + + AP + D+++ DP KR T ++++
Sbjct: 264 SPYPGMPVDSKFYKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 366 NLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGT 425
++ T+ ++LKE F D D NG +S EL+ + LG LT+ +++Q ++ AD+DG+G
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 426 IDYIEFITATM 436
++Y EF+ M
Sbjct: 62 VNYEEFVKMMM 72
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 445 EHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISYDE 504
E L +AF+ FDKD +GYI+ EL N+G+ T +++++ E D D DG+++Y+E
Sbjct: 9 EELKEAFKVFDKDQNGYISASELRHVM--INLGEKLTDEEVEQMIKEADLDGDGQVNYEE 66
Query: 505 FRAMM 509
F MM
Sbjct: 67 FVKMM 71
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 56.6 bits (135), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 366 NLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGT 425
++P +E+++++E F D D NG +S EL + LG M E +++ +Q D+DG+G
Sbjct: 29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQ 88
Query: 426 IDYIEFIT 433
+D+ EF+T
Sbjct: 89 VDFEEFVT 96
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 442 ERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRIS 501
+ E + +AF+ FD+D +G+I+ EL TA + ++G ++ I+ +D D DG++
Sbjct: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMR--SLGYMPNEVELEVIIQRLDMDGDGQVD 90
Query: 502 YDEFRAMM 509
++EF ++
Sbjct: 91 FEEFVTLL 98
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 53/289 (18%)
Query: 75 LGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDDIKREVQIMQH-LSGQPNIVEF 133
+G+G+YG ++ + + +SVA K+ S D RE +I L NI+ F
Sbjct: 16 VGKGRYGEVWRGLWHG-------ESVAV-KIFSSRDEQSWFRETEIYNTVLLRHDNILGF 67
Query: 134 KGAYEDMRF----VHIVMELCADGELFD---RIIAKGHYSERAAASVFRDIMHV-VNVCH 185
+ R + ++ G L+D R + H + R A S + H+ V +
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 186 TKG---VVHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI-----VGSAYYV 237
T+G + HRD K N L SN + I D G + +G Y DI VG+ Y+
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCI---ADLGLAVMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 238 APEVLRRRYG-------KEIDIWSAGVILY-----ILLSGV-----PPFW--AETEKGIF 278
APEVL + K DIW+ G++L+ +++G+ PPF+ +
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFE 244
Query: 279 DAILQGNIDFDSAPWPT------ISSGAKDLVRRMLTQDPKKRITAAEV 321
D +D + P + SG ++R +P R+TA +
Sbjct: 245 DMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRI 293
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK-LERFEHLYKAFQ 452
GTID+ EF+T ++ K + E + +AF+
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 442 ERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRIS 501
E+ +AF FDKD G IT EL T + ++G + T A ++++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 502 YDEFRAMM 509
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 4/141 (2%)
Query: 370 EEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYI 429
+++ + KE F D++ G ++ + L+ L + G + + + AD GNG I +
Sbjct: 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62
Query: 430 EFITATMQRHKLERFEH-LYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEI 488
EF++ +R K E L +AF+ FD + +GYI L+ A N+GD E
Sbjct: 63 EFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDAL--LNLGDRLKPHEFAEF 120
Query: 489 MSEVDRDKDGRISYDEFRAMM 509
+ + +K G+I YD F M
Sbjct: 121 LGITETEK-GQIRYDNFINTM 140
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 449 KAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISYDEFRAM 508
+AF+ FD + +G+IT + L+T K++ G A E+ +E D +G+I + EF +M
Sbjct: 10 EAFELFDSERTGFITKEGLQTVLKQF--GVRVEPAAFNEMFNEADATGNGKIQFPEFLSM 67
Query: 509 MKSGTHLRAVSSRSL 523
M G ++ +S +
Sbjct: 68 M--GRRMKQTTSEDI 80
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK 440
GTID+ EF+T ++ K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 442 ERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRIS 501
E+ +AF FDKD G IT EL T + ++G + T A ++++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 502 YDEFRAMM 509
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 38/230 (16%)
Query: 61 PYEDVKSHYTMGKELGRGQYGIIYLCIENSTGRQFACKSVAKRKLVSKTDRDD----IKR 116
P+E ++ +G+ +G+G++G +Y GR VA R + + D +D KR
Sbjct: 31 PFEQLE----IGELIGKGRFGQVY------HGRWHG--EVAIRLIDIERDNEDQLKAFKR 78
Query: 117 EVQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRII-AKGHYSERAAASVFR 175
EV + + N+V F GA + I+ LC L+ + AK + +
Sbjct: 79 EVMAYRQ-TRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQ 137
Query: 176 DIMHVVNVCHTKGVVHRDLKPENFLFTSNDENAIMKVTDFGF---SFFFEEGK---VYRD 229
+I+ + H KG++H+DLK +N + +N + +TDFG S + G+ R
Sbjct: 138 EIVKGMGYLHAKGILHKDLKSKNVFY----DNGKVVITDFGLFSISGVLQAGRREDKLRI 193
Query: 230 IVGSAYYVAPEVLRRR----------YGKEIDIWSAGVILYILLSGVPPF 269
G ++APE++R+ + K D+++ G I Y L + PF
Sbjct: 194 QNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 366 NLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGT 425
NL E+I + KE F D DNNG++S EL + LG +E+++ M D+DGN
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 426 IDYIEFITATMQRH 439
I++ EF+ A M R
Sbjct: 63 IEFSEFL-ALMSRQ 75
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 442 ERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRIS 501
E+ +AF FDKDN+G I+ EL T + ++G + A + ++M+E+D D + +I
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMR--SLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 502 YDEFRAMM 509
+ EF A+M
Sbjct: 65 FSEFLALM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK 440
GTID+ EF+T ++ K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 442 ERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRIS 501
E+ +AF FDKD G IT EL T + ++G + T A ++++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 502 YDEFRAMM 509
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 137 YEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDIMHVVNVCHTKGVVHRDLKP 196
Y D R ++ V +L + +G + A ++ R I ++ H G HRD+KP
Sbjct: 110 YVDXRLINGV-------DLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKP 162
Query: 197 ENFLFTSNDENAIMKVTDFGFSFFFEEGKVYR--DIVGSAYYVAPEVLRRRYGK-EIDIW 253
EN L +++D + DFG + + K+ + + VG+ YY APE + DI+
Sbjct: 163 ENILVSADD---FAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIY 219
Query: 254 SAGVILYILLSGVPPFWAETEKGIFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQDPK 313
+ +LY L+G PP+ + + + A + I S P I ++ R ++P+
Sbjct: 220 ALTCVLYECLTGSPPYQGD-QLSVXGAHINQAIPRPSTVRPGIPVAFDAVIARGXAKNPE 278
Query: 314 KR 315
R
Sbjct: 279 DR 280
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYL-----CIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
E + + T+ + LG G +G +Y + + Q A K++ + + S+ D D E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLME 84
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDI 177
I+ L+ Q NIV G I++EL A G+L + + ++ D+
Sbjct: 85 ALIISKLNHQ-NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 178 MHVVN--VCHTKGV-----VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
+HV C + + +HRD+ N L T + K+ DFG + RDI
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---------RDI 194
Query: 231 VGSAYY------------VAPEV-LRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKG 276
++YY + PE + + + D WS GV+L+ + S G P+ +++ +
Sbjct: 195 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
Query: 277 IFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQ----DPKKRITAAEVLE 323
+ + + G D P G V R++TQ P+ R A +LE
Sbjct: 255 VLEFVTSGG-RMDP---PKNCPGP---VYRIMTQCWQHQPEDRPNFAIILE 298
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMQRHK 440
GTID+ EF+T ++ K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 442 ERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRIS 501
E+ +AF FDKD G IT EL T + ++G + T A ++++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 502 YDEFRAMM 509
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYL-----CIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
E + + T+ + LG G +G +Y + + Q A K++ + + S+ D D E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLME 98
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDI 177
I+ L+ Q NIV G I++EL A G+L + + ++ D+
Sbjct: 99 ALIISKLNHQ-NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 178 MHVVN--VCHTKGV-----VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
+HV C + + +HRD+ N L T + K+ DFG + RDI
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---------RDI 208
Query: 231 VGSAYY------------VAPEV-LRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKG 276
++YY + PE + + + D WS GV+L+ + S G P+ +++ +
Sbjct: 209 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
Query: 277 IFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQ----DPKKRITAAEVLE 323
+ + + G D P G V R++TQ P+ R A +LE
Sbjct: 269 VLEFVTSGG-RMDP---PKNCPGP---VYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 373 QKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGNGTIDYIEFI 432
++LKE F D D NG +S EL+ + LG LT+ +++Q ++ AD+DG+G ++Y EF+
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
Query: 433 TATM 436
M
Sbjct: 64 KMMM 67
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 445 EHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRISYDE 504
E L +AF+ FDKD +GYI+ EL N+G+ T +++++ E D D DG+++Y+E
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVM--INLGEKLTDEEVEQMIKEADLDGDGQVNYEE 61
Query: 505 FRAMM 509
F MM
Sbjct: 62 FVKMM 66
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 49/291 (16%)
Query: 63 EDVKSHYTMGKELGRGQYGIIYL-----CIENSTGRQFACKSVAKRKLVSKTDRDDIKRE 117
E + + T+ + LG G +G +Y + + Q A K++ + + S+ D D E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLME 98
Query: 118 VQIMQHLSGQPNIVEFKGAYEDMRFVHIVMELCADGELFDRIIAKGHYSERAAASVFRDI 177
I+ + Q NIV G I+MEL A G+L + + ++ D+
Sbjct: 99 ALIISKFNHQ-NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 178 MHVVN--VCHTKGV-----VHRDLKPENFLFTSNDENAIMKVTDFGFSFFFEEGKVYRDI 230
+HV C + + +HRD+ N L T + K+ DFG + RDI
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---------RDI 208
Query: 231 VGSAYY------------VAPEV-LRRRYGKEIDIWSAGVILYILLS-GVPPFWAETEKG 276
++YY + PE + + + D WS GV+L+ + S G P+ +++ +
Sbjct: 209 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
Query: 277 IFDAILQGNIDFDSAPWPTISSGAKDLVRRMLTQ----DPKKRITAAEVLE 323
+ + + G D P G V R++TQ P+ R A +LE
Sbjct: 269 VLEFVTSGG-RMDP---PKNCPGP---VYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFIT 433
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 442 ERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRIS 501
E+ +AF FDKD G IT EL T + ++G + T A ++++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 502 YDEFRAMM 509
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 424 GTIDYIEFIT 433
GTID+ EF+T
Sbjct: 62 GTIDFPEFLT 71
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 442 ERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRIS 501
E+ +AF FDKD G IT EL T + ++G + T A ++++++EVD D +G I
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 65
Query: 502 YDEFRAMM 509
+ EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 364 VENLPTEEIQKLKEKFTEMDTDNNGTLSYDELKAGLAKLGSMLTESDIKQYMQAADIDGN 423
+ L E+I + KE F+ D D +GT++ EL + LG TE++++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFIT 433
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 442 ERFEHLYKAFQYFDKDNSGYITVDELETAFKEYNMGDDATIATIKEIMSEVDRDKDGRIS 501
E+ +AF FDKD G IT EL T + ++G + T A ++++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 502 YDEFRAMM 509
+ EF MM
Sbjct: 65 FPEFLTMM 72
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,154,914
Number of Sequences: 62578
Number of extensions: 716193
Number of successful extensions: 6744
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 387
Number of HSP's that attempted gapping in prelim test: 2111
Number of HSP's gapped (non-prelim): 1982
length of query: 536
length of database: 14,973,337
effective HSP length: 103
effective length of query: 433
effective length of database: 8,527,803
effective search space: 3692538699
effective search space used: 3692538699
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)