Your job contains 1 sequence.
>009383
MSLYFRSNPPLFLPFLVIFLSLFLFTRQTSASPPHSHFHTVVPIPEREYGGVSLWKLKRY
LAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWF
VVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSS
TLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATT
LSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILV
AGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVT
NQLVSVVDRIIINVVNRNFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSN
ATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRD
TFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHRVYTKNLMD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009383
(536 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2046079 - symbol:AT2G12400 "AT2G12400" species... 1734 1.3e-178 1
TAIR|locus:2059567 - symbol:AT2G25270 species:3702 "Arabi... 1367 1.0e-139 1
TAIR|locus:2198923 - symbol:AT1G80540 "AT1G80540" species... 1142 7.1e-116 1
TAIR|locus:2026276 - symbol:AT1G71110 "AT1G71110" species... 1073 1.5e-108 1
TAIR|locus:2158581 - symbol:AT5G67550 "AT5G67550" species... 280 7.5e-22 1
>TAIR|locus:2046079 [details] [associations]
symbol:AT2G12400 "AT2G12400" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002685 GenomeReviews:CT485783_GR
eggNOG:NOG277729 EMBL:BT002043 IPI:IPI00530884 RefSeq:NP_178935.2
UniGene:At.14383 PaxDb:Q8H0U2 PRIDE:Q8H0U2
EnsemblPlants:AT2G12400.1 GeneID:815712 KEGG:ath:AT2G12400
TAIR:At2g12400 HOGENOM:HOG000239584 InParanoid:Q8H0U2 OMA:MPLLCNP
PhylomeDB:Q8H0U2 ProtClustDB:CLSN2690686 Genevestigator:Q8H0U2
Uniprot:Q8H0U2
Length = 541
Score = 1734 (615.5 bits), Expect = 1.3e-178, P = 1.3e-178
Identities = 327/491 (66%), Positives = 389/491 (79%)
Query: 46 EREYGGVSLWK---LKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWNISNKHYW 102
E E G W+ ++R +AEE +NS+LILA KRT+RKDP DNF Y GGWNISN HY
Sbjct: 37 EEERGVEEEWRTSVIERVIAEESGENSSLILAAKRTRRKDPADNFKLYTGGWNISNSHYL 96
Query: 103 ASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTIS 162
SVG+TAAPF IIA +WFV FGLSL +CL YCCC R+ YGYSR YALSLILL+ FTI+
Sbjct: 97 TSVGYTAAPFIIIALVWFVFFGLSLSLICLCYCCCARQSYGYSRVAYALSLILLISFTIA 156
Query: 163 AIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPD 222
AI+GC+ LYTGQGKFH+ST DTL+YVV QA++TSE+L+NVSDYL AAK + V S L D
Sbjct: 157 AIIGCVFLYTGQGKFHASTTDTLDYVVSQANLTSENLRNVSDYLNAAKKVDVQSSILPQD 216
Query: 223 VQSNIDKIDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSV 282
V S+ID I KINSSATTLS +T +N I++ LD + LAL+I+AAVMLFLAF+GFL S+
Sbjct: 217 VLSSIDNIQGKINSSATTLSVKTMENQDKIQNVLDIMRLALVIIAAVMLFLAFIGFLLSI 276
Query: 283 FGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILP 342
FGLQCLVY LVILGWILV TF+LCG FLLLHNVV DTCV+MD+WV+NPTAHTALDDILP
Sbjct: 277 FGLQCLVYTLVILGWILVTVTFVLCGGFLLLHNVVGDTCVAMDQWVQNPTAHTALDDILP 336
Query: 343 CVDNATAQETLKQTKTVTNQLXXXXXXXXXXXXXXXFLPQAGIVYYNQSGPLLPVLCNPF 402
CVDNATA+ETL +TK VT QL F PQ +YYNQSGPL+P+LCNPF
Sbjct: 337 CVDNATARETLTRTKLVTYQLVNLLDNAISNMTNRNFPPQFRPLYYNQSGPLMPLLCNPF 396
Query: 403 NSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYAL 462
N+DL++RQC +V +NATEVWKN+ CQ + G C TPGRLTP L++QMA+AVNVSY L
Sbjct: 397 NADLSDRQCQPGQVHLNNATEVWKNFTCQIVTPGTCSTPGRLTPKLYSQMAAAVNVSYGL 456
Query: 463 YRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYA 522
Y+YGPFL +LQ C FVR TFTDI RDHCPGL+R+++WIY+GL +VSA+VM SL+FWVIYA
Sbjct: 457 YKYGPFLADLQGCDFVRSTFTDIERDHCPGLKRYTQWIYVGLVVVSASVMSSLVFWVIYA 516
Query: 523 RERRHRVYTKN 533
RERRHRVYTK+
Sbjct: 517 RERRHRVYTKD 527
>TAIR|locus:2059567 [details] [associations]
symbol:AT2G25270 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0031507 "heterochromatin assembly" evidence=RCA]
[GO:0045787 "positive regulation of cell cycle" evidence=RCA]
GO:GO:0005886 GO:GO:0009506 EMBL:CP002685 EMBL:DQ446565
IPI:IPI00542589 RefSeq:NP_180099.2 UniGene:At.14341
UniGene:At.68422 ProteinModelPortal:Q1PF01 PRIDE:Q1PF01
EnsemblPlants:AT2G25270.1 GeneID:817065 KEGG:ath:AT2G25270
TAIR:At2g25270 InParanoid:Q1PF01 OMA:ETLEYVM PhylomeDB:Q1PF01
ProtClustDB:CLSN2918673 Genevestigator:Q1PF01 Uniprot:Q1PF01
Length = 545
Score = 1367 (486.3 bits), Expect = 1.0e-139, P = 1.0e-139
Identities = 247/460 (53%), Positives = 334/460 (72%)
Query: 69 STLILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLC 128
+++ LA +RT RKDP++ F KY GGWNISN+HYWASV +TA P F++A +WF+ FG+ L
Sbjct: 68 ASVALAAQRTYRKDPLNGFEKYTGGWNISNQHYWASVSYTAVPLFVLAAVWFLGFGICLL 127
Query: 129 FMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYV 188
+C+ + C R GYS+ Y +SLI L+ FT+ AI+GC++LY+GQ +++ ST +TL YV
Sbjct: 128 VICMCHICHRTNSVGYSKVAYVVSLIFLLIFTVIAIIGCVLLYSGQIRYNKSTTETLEYV 187
Query: 189 VKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATTLSYQTKKN 248
+ QA T L+ +SDYLA+AK V V L +VQ+ ID+I K++SS T++ ++ +
Sbjct: 188 MSQADSTISQLRAISDYLASAKQAAVLQVLLPANVQTEIDQIGVKLDSSVATITEKSTNS 247
Query: 249 SKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCG 308
S I+ LDSV +ALI+V+ VML + FLG + S+FG+Q +VY LVILGWILV GTFIL G
Sbjct: 248 SNHIRHFLDSVRVALIVVSIVMLVVTFLGLVSSIFGMQVIVYTLVILGWILVTGTFILSG 307
Query: 309 IFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKTVTNQLXXXXX 368
FL+LHN ADTCV+M EWV+ P+++TALD+ILPC DNATAQETL +++ VT QL
Sbjct: 308 TFLVLHNATADTCVAMSEWVERPSSNTALDEILPCTDNATAQETLMRSREVTGQLVELIN 367
Query: 369 XXXXXXXXXXFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNY 428
F P +YYNQSGPLLP+LCNPFN DLT+R C ++D +NATE W ++
Sbjct: 368 TVITNVSNINFSPVFVPMYYNQSGPLLPLLCNPFNHDLTDRSCSPGDLDLNNATEAWTSF 427
Query: 429 ICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRD 488
+CQ S +G C T GRLTP L++QMAS VN+S L R PFLV LQDC++ + TF DI+ D
Sbjct: 428 VCQVSQNGTCTTTGRLTPALYSQMASGVNISTGLIRDAPFLVQLQDCSYAKQTFRDITND 487
Query: 489 HCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYARERRHR 528
HCPGLQR+ W+Y+GL +++ AVMLSL+FW+IY+RERRHR
Sbjct: 488 HCPGLQRYGYWVYVGLAILATAVMLSLMFWIIYSRERRHR 527
>TAIR|locus:2198923 [details] [associations]
symbol:AT1G80540 "AT1G80540" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 IPI:IPI00539808 RefSeq:NP_178169.4
UniGene:At.52580 PRIDE:F4HTY4 EnsemblPlants:AT1G80540.1
GeneID:844393 KEGG:ath:AT1G80540 OMA:ASIADCT Uniprot:F4HTY4
Length = 538
Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
Identities = 234/505 (46%), Positives = 313/505 (61%)
Query: 36 SHFHTVVPIPEREYGGVSLWKLKRYLAEEPTDNSTLILAEKRTQRKDPIDNFHKYKGGWN 95
S H V S ++R + E + + L+LA +RTQR DP+++F+ Y GWN
Sbjct: 30 SFSHAVSSSCHHRPSSTSFQGVRRQILEGG-NGTRLVLAAERTQRPDPLNHFNIYVDGWN 88
Query: 96 ISNKHYWASVGFTAAPFFIIAGIWFVVFGLSLCFMCLHYCCCR--REPYGYSRTCYALSL 153
++N HY ASVGF+A PF +IA WFV+ GL L CL CCC R YGYSR CY LSL
Sbjct: 89 VTNSHYIASVGFSAVPFIVIAIAWFVLLGLFLICSCLCCCCCGCGRRNYGYSRVCYTLSL 148
Query: 154 ILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIG 213
+ L+ FTI+A++G +LYTGQ +F+ S T Y+VKQA L ++ D + +AK I
Sbjct: 149 VFLLLFTIAAVIGSAMLYTGQNEFYGSVERTFMYIVKQATGVLTKLTSLWDSIQSAKDIQ 208
Query: 214 VNSVTL-APDVQSNIDKIDRKINSSATTLSYQTKKNS-KDIKDALDSVGLALIIVAAVML 271
++ L P+ + NID + I S T + + + + AL+ V L ++A VML
Sbjct: 209 LDGHNLFPPEFRGNIDHFNNMIKMSNITYPDRVANQTIRYLTGALNPVRYVLNVIAGVML 268
Query: 272 FLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNP 331
+AFLG LFS GL+ LVY LVILGWILV T +L +FL+ HNVVADTC++MD+WV +P
Sbjct: 269 AVAFLGLLFSFCGLRVLVYLLVILGWILVTATILLSAVFLVFHNVVADTCMAMDQWVHDP 328
Query: 332 TAHTALDDILPCVDNATAQETLKQTKTVT-NQLXXXXXXXXXXXXXXXFLPQAGIVYYNQ 390
A +AL +LPC+D T ETL TKT+T + F P A Y+NQ
Sbjct: 329 AADSALSQLLPCLDPKTIGETLDITKTMTATAVDMTNAYTVNVSNHDQFPPNAPF-YHNQ 387
Query: 391 SGPLLPVLCNPFNSDLTNRQCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHN 450
SGPL+P+LCNP + + R C EV +NA++V+K YICQ ++ GIC T GRLT ++
Sbjct: 388 SGPLVPLLCNPLDQNHKPRPCAPDEVLLANASQVYKGYICQVNAEGICTTQGRLTQGSYD 447
Query: 451 QMASAVNVSYALYRYGPFLVNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAA 510
QM A+NV++ L YGPFL ++ DCTFVRDTF DI+ +CPGL S+WIY GL +S A
Sbjct: 448 QMMGAINVAFTLDHYGPFLASIADCTFVRDTFRDITTKNCPGLSITSQWIYAGLASLSGA 507
Query: 511 VMLSLIFWVIYARERRHRVYTKNLM 535
VM SLIFW+I+ RERRHR TK M
Sbjct: 508 VMFSLIFWLIFVRERRHRSQTKKSM 532
>TAIR|locus:2026276 [details] [associations]
symbol:AT1G71110 "AT1G71110" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 IPI:IPI00521585
RefSeq:NP_177267.2 UniGene:At.52472 EnsemblPlants:AT1G71110.1
GeneID:843451 KEGG:ath:AT1G71110 OMA:SILPCVD Uniprot:F4I8E9
Length = 557
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 220/482 (45%), Positives = 293/482 (60%)
Query: 55 WKLKRYLAEEPTDNST----LILAEKRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAA 110
WK LA P + L+LA RT+R D + F Y GGWNI+N HYWASVGFT A
Sbjct: 46 WKGGISLAPGPESDDVVSDYLLLAAHRTKRPDILRAFKPYHGGWNITNNHYWASVGFTGA 105
Query: 111 PFFIIAGIWFVVFG-LSLCFMCLHYCCCRREPYGYSRTCYALSLILLVFFTISAIVGCIV 169
P FI+A IW + FG L + + C + C + G S + ILL+ FT A VGCI+
Sbjct: 106 PGFILAVIWLLSFGSLLVVYHCFKWRICDKAK-GSSFDTRRICFILLIVFTCVAAVGCIL 164
Query: 170 LYTGQGKFHSSTLDTLNYVVKQAHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDK 229
L GQ KFH+ + TL YVV Q+ T E LQNV+ YL+ AKTI V + + DV IDK
Sbjct: 165 LSVGQDKFHTEAMHTLKYVVNQSDYTVEILQNVTQYLSLAKTINVTQIVIPSDVMGEIDK 224
Query: 230 IDRKINSSATTLSYQTKKNSKDIKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLV 289
++ +N++A TL T N+ IK +V ALI VA VML L+F+G L SV Q +V
Sbjct: 225 LNVNLNTAAVTLGETTTDNAAKIKRVFYAVRSALITVATVMLILSFVGLLLSVLRHQHVV 284
Query: 290 YFLVILGWILVAGTFILCGIFLLLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATA 349
+ V+ GWILVA TF+LCG+FL+L+N ++DTCV+M EWV NP A TAL ILPCVD T
Sbjct: 285 HIFVVSGWILVAVTFVLCGVFLILNNAISDTCVAMKEWVDNPHAETALSSILPCVDQQTT 344
Query: 350 QETLKQTKTVTNQLXXXXXXXXXXXXXXXFLPQAGIVYYNQSGPLLPVLCNPFNSDLTNR 409
+TL Q+K V N + P YYNQSGP +P LC PF++++ +R
Sbjct: 345 NQTLSQSKVVINSIVTVVNTFVYAVANTNPAPGQDR-YYNQSGPPMPPLCIPFDANMEDR 403
Query: 410 QCVASEVDFSNATEVWKNYICQPSSSGICKTPGRLTPTLHNQMASAVNVSYALYRYGPFL 469
QC E+ NA+ VW+NY C+ + SGIC T GR+TP Q+ +AVN SYAL Y P L
Sbjct: 404 QCSPWELSIENASSVWENYKCEVTPSGICTTVGRVTPDTFGQLVAAVNESYALEHYTPPL 463
Query: 470 VNLQDCTFVRDTFTDISRDHCPGLQRHSKWIYIGLFMVSAAVMLSLIFWVIYA-RERRHR 528
++ +DC FVR+TF I+ D+CP L R+ + + GL ++S V+L L+ W+ YA R +R
Sbjct: 464 LSFRDCNFVRETFMSITSDYCPPLVRNLRIVNAGLGLISVGVLLCLVLWIFYANRPQREE 523
Query: 529 VY 530
V+
Sbjct: 524 VF 525
>TAIR|locus:2158581 [details] [associations]
symbol:AT5G67550 "AT5G67550" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:DQ447116 IPI:IPI00546342
RefSeq:NP_201556.2 UniGene:At.50566 EnsemblPlants:AT5G67550.1
GeneID:836891 KEGG:ath:AT5G67550 TAIR:At5g67550 eggNOG:NOG237747
HOGENOM:HOG000124784 InParanoid:Q1PDF2 OMA:RNKHYWA PhylomeDB:Q1PDF2
ProtClustDB:CLSN2918892 Genevestigator:Q1PDF2 Uniprot:Q1PDF2
Length = 509
Score = 280 (103.6 bits), Expect = 7.5e-22, P = 7.5e-22
Identities = 94/455 (20%), Positives = 186/455 (40%)
Query: 76 KRTQRKDPIDNFHKYKGGWNISNKHYWASVGFTAAPFFIIAGIWFVV---FGLSLCFMCL 132
+R +R+DP+++F Y GG+N+ NKHYWA+ FT + +AG+ +V GL + F
Sbjct: 35 ERFKRRDPLNSFRYYDGGFNVRNKHYWAATAFTGIHGYAVAGVLIIVGICLGLYVAFSDK 94
Query: 133 HY-CCCRREPYGYSRTCYALSLILLVFFTISAIVGCIVLYTGQGKFHSSTLDTLNYVVKQ 191
R Y R L L+LL+F +S + IV+ Q + + + + +
Sbjct: 95 RRRVSSTRRRY-LDRYYLPLFLLLLLFMFLSVVTTGIVIAANQRS--KNRTEEMKETIDK 151
Query: 192 AHITSESLQNVSDYLAAAKTIGVNSVTLAPDVQSNIDKIDRKINSSATTLSYQTKKNSKD 251
A + QN+ + + I + + ++ ++ + + +
Sbjct: 152 AG--EDVNQNIRTVIVSLTKIQYLLLPYDQNTTHLLNVTTHRLGKGSRLIQSFLHHKGRS 209
Query: 252 IKDALDSVGLALIIVAAVMLFLAFLGFLFSVFGLQCLVYFLVILGWILVAGTFILCGIFL 311
I A+ ++ +++ + LFL L FL + ++ L WI+ ++L G
Sbjct: 210 IDLAIKISYVSHLMITSTNLFLLLLAFLPLLLHWHPGFIMVIFLCWIITTLCWVLTGFDF 269
Query: 312 LLHNVVADTCVSMDEWVKNPTAHTALDDILPCVDNATAQETLKQTKT-VTNQLXXXXXXX 370
+H D C + + +V+NP T L ++ PC+D + +TL + + N +
Sbjct: 270 FIHTFAEDLCSAFNGFVQNPRNST-LTNLFPCMDPLHSDKTLIEISLMIHNFITQLNSKV 328
Query: 371 XXXXXXXXFLPQAGIVYYNQSGPLLPVLCNPF-----NSDLTNRQCVASEVDFSNATEVW 425
++ V + P ++C+PF NS T + C + +
Sbjct: 329 AESMRSNALTDRSNTVSW---APESGIICDPFVGQQINS-YTPQSCSNGAIPIGEFPNIL 384
Query: 426 KNYICQPSSSG-ICKTPGRLTP-TLHNQMASAVNVSYALYRYGPFLVNLQDCTFVRDTFT 483
+ C C+ G+ P + ++ + N + + P NL +C V+DT +
Sbjct: 385 SRFTCHDKDPPETCRITGKFIPEAAYLKVYAYSNSAQGMLDILPSFQNLTECLAVKDTLS 444
Query: 484 DISRDHCPGLQRHSKWIYIGLFMVSAA-VMLSLIF 517
I + C + ++ + +S V+L L+F
Sbjct: 445 SIVSNQCDPFRASMYRLWASILALSLIMVVLVLLF 479
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.137 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 536 504 0.00085 119 3 11 22 0.46 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 627 (67 KB)
Total size of DFA: 322 KB (2163 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.59u 0.14s 43.73t Elapsed: 00:00:01
Total cpu time: 43.59u 0.14s 43.73t Elapsed: 00:00:01
Start: Thu May 9 18:26:50 2013 End: Thu May 9 18:26:51 2013