Query 009383
Match_columns 536
No_of_seqs 147 out of 189
Neff 5.7
Searched_HMMs 13730
Date Mon Mar 25 03:58:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009383.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009383hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1dx5i2 g.3.11.1 (I:388-422) T 27.4 8.6 0.00063 24.7 0.7 26 387-416 2-27 (35)
2 d1k04a_ a.24.14.1 (A:) FAT dom 24.7 1.1E+02 0.0077 25.5 7.5 54 192-246 40-95 (142)
3 d1r3jc_ f.14.1.1 (C:) Potassiu 14.3 1E+02 0.0073 23.4 4.8 21 510-530 83-103 (103)
4 d1iyca_ g.31.1.2 (A:) Antifung 12.7 31 0.0022 21.7 0.8 17 408-432 15-31 (36)
5 d1rh5b_ f.23.28.1 (B:) Preprot 9.2 2.2E+02 0.016 19.8 4.7 31 95-125 17-47 (56)
6 d1yzma1 a.2.19.1 (A:456-501) F 9.1 2.7E+02 0.02 18.6 5.8 21 192-212 1-21 (46)
7 d2az0a1 a.30.8.1 (A:2-71) B2 { 8.5 3.2E+02 0.023 19.0 5.5 28 217-244 27-54 (70)
8 d2asxa1 a.274.1.1 (A:278-331) 8.3 2.7E+02 0.02 18.1 6.1 47 197-244 5-52 (54)
9 g1o7d.1 a.8.3.1 (B:385-422,C:4 7.8 2.5E+02 0.018 20.7 5.0 38 339-376 55-93 (95)
10 d1gs9a_ a.24.1.1 (A:) Apolipop 6.6 5.3E+02 0.039 20.0 7.1 27 227-253 87-113 (144)
No 1
>d1dx5i2 g.3.11.1 (I:388-422) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.43 E-value=8.6 Score=24.73 Aligned_cols=26 Identities=23% Similarity=0.553 Sum_probs=18.4
Q ss_pred cccCCCCCCccccCCCCCCCCcccCCCCcc
Q 009383 387 YYNQSGPLLPVLCNPFNSDLTNRQCVASEV 416 (536)
Q Consensus 387 y~nqsgp~~p~lCnPf~~~~~~~~C~~gev 416 (536)
|-||+ .-|--|||.+|+ +-+||.|-+
T Consensus 2 FCNqt--~CPAdCdP~~p~--~C~CPeGyI 27 (35)
T d1dx5i2 2 FCNQT--ACPADCDPNTQA--SCECPEGYI 27 (35)
T ss_dssp CCCSS--EEECEECTTSTT--CEECCTTEE
T ss_pred ccccc--cCCCccCCCCCC--cccCCCceE
Confidence 34565 347799999886 678888753
No 2
>d1k04a_ a.24.14.1 (A:) FAT domain of focal adhesion kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.65 E-value=1.1e+02 Score=25.51 Aligned_cols=54 Identities=17% Similarity=0.142 Sum_probs=36.8
Q ss_pred hhHHhHhHHhHHHHHHHhhhcCccc--cccCcchhhhHHHHHHHHHhhHHHHHHHHh
Q 009383 192 AHITSESLQNVSDYLAAAKTIGVNS--VTLAPDVQSNIDKIDRKINSSATTLSYQTK 246 (536)
Q Consensus 192 an~tv~~l~nVt~~l~~ak~~~v~~--~~lp~d~~~~i~~~~~~Lns~a~~i~~k~~ 246 (536)
.++-+.-+++|...|.++-. .+++ ..+|.+.+..++-+.+-|++...++.+++.
T Consensus 40 ~~~Y~~lVK~VG~~Lr~Ll~-svD~~~~~lp~~~~~eIema~klLskDm~eLi~~Mk 95 (142)
T d1k04a_ 40 PEEYVPMVKEVGLALRTLLA-TVDETIPLLPASTHREIEMAQKLLNSDLGELINKMK 95 (142)
T ss_dssp GGGHHHHHHHHHHHHHHHHH-HHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHH-HHHHHhccCcHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445566666666655443 3433 247888888899899999999888887754
No 3
>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}
Probab=14.30 E-value=1e+02 Score=23.41 Aligned_cols=21 Identities=14% Similarity=0.118 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHhhcchhhhc
Q 009383 510 AVMLSLIFWVIYARERRHRVY 530 (536)
Q Consensus 510 ~~~l~~i~Wi~~~r~~~~r~~ 530 (536)
++..+.+.=.+..|+++||.|
T Consensus 83 ~~~~~~i~~~~~~~~~~rr~h 103 (103)
T d1r3jc_ 83 GLVTAALATWFVGREQERRGH 103 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhcCC
Confidence 333333333344455555543
No 4
>d1iyca_ g.31.1.2 (A:) Antifungal peptide scarabaecin {Beetle (Oryctes rhinoceros) [TaxId: 72550]}
Probab=12.72 E-value=31 Score=21.68 Aligned_cols=17 Identities=24% Similarity=0.886 Sum_probs=13.8
Q ss_pred cccCCCCcccccchhhhhccceecC
Q 009383 408 NRQCVASEVDFSNATEVWKNYICQP 432 (536)
Q Consensus 408 ~~~C~~gev~~~~a~~v~~~~~C~~ 432 (536)
..+||.| .||..|.|..
T Consensus 15 rsncpkg--------kvwngfdcks 31 (36)
T d1iyca_ 15 RSNCPKG--------KVWNGFDCKS 31 (36)
T ss_dssp TSCCCSS--------CEEETTEEEC
T ss_pred ccCCCCc--------ceecCccccC
Confidence 5678988 6899999964
No 5
>d1rh5b_ f.23.28.1 (B:) Preprotein translocase SecE subunit {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=9.23 E-value=2.2e+02 Score=19.84 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=22.0
Q ss_pred cCCchhhHHHHhhhhhHHHHHHHHHHHHHHH
Q 009383 95 NISNKHYWASVGFTAAPFFIIAGIWFVVFGL 125 (536)
Q Consensus 95 ni~n~hY~aSv~ftg~pg~via~lwfl~fgl 125 (536)
.|+-++|.+....+|+-.++++.+=|+++.+
T Consensus 17 KP~~~Ef~~ia~v~~iG~~i~G~IGf~I~li 47 (56)
T d1rh5b_ 17 KPTKDEYLAVAKVTALGISLLGIIGYIIHVP 47 (56)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566899999888888777766666554433
No 6
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.12 E-value=2.7e+02 Score=18.63 Aligned_cols=21 Identities=14% Similarity=0.344 Sum_probs=16.8
Q ss_pred hhHHhHhHHhHHHHHHHhhhc
Q 009383 192 AHITSESLQNVSDYLAAAKTI 212 (536)
Q Consensus 192 an~tv~~l~nVt~~l~~ak~~ 212 (536)
+|-.++.|.++.+++..||..
T Consensus 1 ~nPllqQi~~ik~yI~QAk~a 21 (46)
T d1yzma1 1 GSPLLQQIHNITSFIRQAKAA 21 (46)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHHHHHHHHh
Confidence 355678899999999999863
No 7
>d2az0a1 a.30.8.1 (A:2-71) B2 {Flock house virus, FHV [TaxId: 12287]}
Probab=8.53 E-value=3.2e+02 Score=19.03 Aligned_cols=28 Identities=18% Similarity=0.284 Sum_probs=22.0
Q ss_pred cccCcchhhhHHHHHHHHHhhHHHHHHH
Q 009383 217 VTLAPDVQSNIDKIDRKINSSATTLSYQ 244 (536)
Q Consensus 217 ~~lp~d~~~~i~~~~~~Lns~a~~i~~k 244 (536)
...|.+++.++|.+..-||++..++.+-
T Consensus 27 q~apnnvrrdldnl~aclnkak~tv~rm 54 (70)
T d2az0a1 27 QDAPNNVRRDLDNLHACLNKAKLTVSRM 54 (70)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCchhHHhhhHHHHHHHHHHHHHHHHH
Confidence 3468888999999999999887666544
No 8
>d2asxa1 a.274.1.1 (A:278-331) Hypothetical protein AF1503 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=8.33 E-value=2.7e+02 Score=18.08 Aligned_cols=47 Identities=9% Similarity=0.137 Sum_probs=26.5
Q ss_pred HhHHhHHHHHHHhhhcCccccccC-cchhhhHHHHHHHHHhhHHHHHHH
Q 009383 197 ESLQNVSDYLAAAKTIGVNSVTLA-PDVQSNIDKIDRKINSSATTLSYQ 244 (536)
Q Consensus 197 ~~l~nVt~~l~~ak~~~v~~~~lp-~d~~~~i~~~~~~Lns~a~~i~~k 244 (536)
.-|+.+++.++.+..=.++ ...| .+-.+.+.++.+.+|.+++.+.+.
T Consensus 5 ~Pl~~l~~~~~~ia~Gdl~-~~i~~~~~~dEig~L~~~fn~M~~~l~~~ 52 (54)
T d2asxa1 5 RPIIELSNTADKIAEGNLE-AEVPHQNRADEIGILAKSIERLRRSLKVA 52 (54)
T ss_dssp HHHHHHHHHHHHHHTTCTT-CCCTTTTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCC-CccCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 3455555555554432222 1222 233566888888888888777654
No 9
>g1o7d.1 a.8.3.1 (B:385-422,C:431-487) Lysosomal alpha-mannosidase {Cow (Bos taurus) [TaxId: 9913]}
Probab=7.75 E-value=2.5e+02 Score=20.66 Aligned_cols=38 Identities=8% Similarity=0.070 Sum_probs=29.4
Q ss_pred cccc-CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009383 339 DILP-CVDNATAQETLKQTKTVTNQLVSVVDRIIINVVN 376 (536)
Q Consensus 339 ~iLP-Cvd~~ta~~~l~~skev~~~lv~~vN~~is~vsn 376 (536)
|+|| |......++...+.+++..+.-+++|+.+..+++
T Consensus 55 D~i~GTs~~~V~~D~~~~~~~~~~~~~~l~~~al~~L~~ 93 (95)
T g1o7d.1 55 DAVSGTSRQHVANDYARQLSEGWRPCEVLMSNALAHLSG 93 (95)
T ss_dssp TTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccCCcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5666 5667777888888888888888888888776654
No 10
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=6.60 E-value=5.3e+02 Score=20.00 Aligned_cols=27 Identities=0% Similarity=0.212 Sum_probs=10.8
Q ss_pred HHHHHHHHHhhHHHHHHHHhhhHHHHH
Q 009383 227 IDKIDRKINSSATTLSYQTKKNSKDIK 253 (536)
Q Consensus 227 i~~~~~~Lns~a~~i~~k~~~n~~~I~ 253 (536)
++.+..+|...++++..++..|.+.++
T Consensus 87 lee~r~kl~~~~eel~~~~~~~~ee~r 113 (144)
T d1gs9a_ 87 MEDVRGRLVQYRGEVQAMLGQSTEELR 113 (144)
T ss_dssp HHHHHHHHHHHHHHHHTSTTCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444333333333
Done!