Query 009385
Match_columns 536
No_of_seqs 249 out of 1526
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 04:01:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009385.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009385hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.7 4.7E-17 1.6E-21 140.0 14.3 99 414-514 27-125 (126)
2 4ga2_A E3 SUMO-protein ligase 99.7 2.1E-16 7.1E-21 138.8 9.3 104 414-519 45-149 (150)
3 4ga2_A E3 SUMO-protein ligase 99.7 1.9E-15 6.5E-20 132.7 14.9 107 414-522 11-117 (150)
4 2pl2_A Hypothetical conserved 99.6 2.9E-15 9.8E-20 138.2 13.9 109 413-524 52-171 (217)
5 2pl2_A Hypothetical conserved 99.6 7.8E-15 2.7E-19 135.3 15.1 112 414-528 98-209 (217)
6 3urz_A Uncharacterized protein 99.6 4.7E-15 1.6E-19 135.9 13.1 104 414-519 18-137 (208)
7 2vyi_A SGTA protein; chaperone 99.6 3.2E-14 1.1E-18 114.5 16.2 106 414-521 26-131 (131)
8 4gyw_A UDP-N-acetylglucosamine 99.6 1.3E-14 4.3E-19 161.0 18.6 109 413-523 56-164 (723)
9 2h6f_A Protein farnesyltransfe 99.6 2.2E-14 7.6E-19 147.1 18.5 107 414-522 145-253 (382)
10 4gyw_A UDP-N-acetylglucosamine 99.6 6.1E-15 2.1E-19 163.6 15.0 108 414-523 23-130 (723)
11 3gyz_A Chaperone protein IPGC; 99.6 1.3E-15 4.3E-20 137.2 7.4 111 389-504 28-138 (151)
12 3upv_A Heat shock protein STI1 99.6 2.4E-14 8.4E-19 119.1 14.7 101 414-516 18-124 (126)
13 2lni_A Stress-induced-phosphop 99.6 2.4E-14 8.1E-19 116.7 12.3 104 414-519 30-133 (133)
14 3sz7_A HSC70 cochaperone (SGT) 99.6 2.9E-14 9.9E-19 124.4 13.6 98 414-513 25-122 (164)
15 2vgx_A Chaperone SYCD; alterna 99.6 5.1E-15 1.7E-19 130.2 7.6 94 413-508 34-127 (148)
16 3gyz_A Chaperone protein IPGC; 99.5 5.8E-14 2E-18 126.3 14.1 106 416-523 18-123 (151)
17 1na0_A Designed protein CTPR3; 99.5 2.3E-13 7.8E-18 108.6 15.9 103 414-518 23-125 (125)
18 3k9i_A BH0479 protein; putativ 99.5 1.9E-14 6.4E-19 119.9 9.4 107 414-522 4-113 (117)
19 3vtx_A MAMA; tetratricopeptide 99.5 1.2E-13 4.3E-18 120.9 15.1 109 414-524 53-161 (184)
20 4gco_A Protein STI-1; structur 99.5 2E-14 6.8E-19 123.5 9.6 97 425-523 4-100 (126)
21 2e2e_A Formate-dependent nitri 99.5 2.6E-14 9E-19 125.2 10.2 109 413-522 23-133 (177)
22 2h6f_A Protein farnesyltransfe 99.5 4.4E-14 1.5E-18 144.9 13.3 109 414-524 111-220 (382)
23 1elw_A TPR1-domain of HOP; HOP 99.5 2.9E-13 9.9E-18 107.3 15.1 99 414-514 18-116 (118)
24 2xcb_A PCRH, regulatory protei 99.5 8.2E-14 2.8E-18 119.7 12.6 98 414-513 32-129 (142)
25 4i17_A Hypothetical protein; T 99.5 1.3E-13 4.4E-18 125.2 14.5 108 414-523 21-136 (228)
26 2vgx_A Chaperone SYCD; alterna 99.5 1E-13 3.5E-18 121.9 13.2 104 418-523 5-108 (148)
27 1zu2_A Mitochondrial import re 99.5 6.4E-14 2.2E-18 130.3 11.7 100 412-512 14-133 (158)
28 2xcb_A PCRH, regulatory protei 99.5 2.5E-14 8.4E-19 123.0 8.1 101 421-523 5-105 (142)
29 1a17_A Serine/threonine protei 99.5 1.7E-13 5.8E-18 116.1 13.1 108 414-523 27-136 (166)
30 3rkv_A Putative peptidylprolyl 99.5 7.6E-14 2.6E-18 121.5 11.2 103 414-518 25-146 (162)
31 1hxi_A PEX5, peroxisome target 99.5 1.1E-13 3.7E-18 117.9 11.6 90 414-505 31-120 (121)
32 3vtx_A MAMA; tetratricopeptide 99.5 3.5E-13 1.2E-17 118.0 15.1 90 414-505 87-176 (184)
33 2fo7_A Synthetic consensus TPR 99.5 5.2E-13 1.8E-17 106.9 14.4 108 414-523 15-122 (136)
34 2dba_A Smooth muscle cell asso 99.5 4.7E-13 1.6E-17 111.2 14.1 101 414-516 42-145 (148)
35 2fbn_A 70 kDa peptidylprolyl i 99.5 2.9E-13 9.8E-18 121.6 13.5 106 414-521 52-173 (198)
36 3as5_A MAMA; tetratricopeptide 99.5 6.7E-13 2.3E-17 112.6 15.0 109 413-523 55-163 (186)
37 1p5q_A FKBP52, FK506-binding p 99.5 1.9E-13 6.5E-18 135.6 13.4 106 414-521 161-281 (336)
38 4gcn_A Protein STI-1; structur 99.5 5E-13 1.7E-17 114.4 13.2 95 414-511 22-123 (127)
39 4i17_A Hypothetical protein; T 99.5 2.4E-13 8.3E-18 123.3 11.8 105 414-520 56-169 (228)
40 3q49_B STIP1 homology and U bo 99.5 7.8E-13 2.7E-17 109.9 13.4 101 414-516 23-128 (137)
41 4eqf_A PEX5-related protein; a 99.5 5.5E-13 1.9E-17 128.3 13.7 109 413-523 190-300 (365)
42 2xev_A YBGF; tetratricopeptide 99.4 3.2E-12 1.1E-16 105.1 15.4 103 414-518 16-124 (129)
43 1wao_1 Serine/threonine protei 99.4 1E-12 3.4E-17 137.5 15.2 114 413-528 19-134 (477)
44 3as5_A MAMA; tetratricopeptide 99.4 8.9E-13 3.1E-17 111.8 12.0 108 414-523 22-129 (186)
45 2q7f_A YRRB protein; TPR, prot 99.4 2.4E-12 8.1E-17 115.2 15.1 110 413-524 104-213 (243)
46 2q7f_A YRRB protein; TPR, prot 99.4 2.5E-12 8.5E-17 115.1 15.1 109 414-524 71-179 (243)
47 2ho1_A Type 4 fimbrial biogene 99.4 2.9E-12 1E-16 116.3 15.4 109 413-523 84-194 (252)
48 3uq3_A Heat shock protein STI1 99.4 1.4E-12 4.6E-17 117.1 12.8 108 414-523 119-226 (258)
49 1elr_A TPR2A-domain of HOP; HO 99.4 1.9E-12 6.6E-17 104.3 12.4 103 414-519 18-127 (131)
50 1xnf_A Lipoprotein NLPI; TPR, 99.4 5.2E-13 1.8E-17 121.7 9.8 107 413-522 56-162 (275)
51 1fch_A Peroxisomal targeting s 99.4 2.3E-12 7.9E-17 122.7 14.6 110 414-525 231-351 (368)
52 2vsy_A XCC0866; transferase, g 99.4 2.1E-12 7.2E-17 134.8 14.4 107 414-522 37-146 (568)
53 1w3b_A UDP-N-acetylglucosamine 99.4 2.1E-12 7.1E-17 125.7 13.4 107 414-522 251-357 (388)
54 2pzi_A Probable serine/threoni 99.4 5.2E-13 1.8E-17 145.1 10.1 107 414-523 447-553 (681)
55 2vsy_A XCC0866; transferase, g 99.4 1.1E-12 3.7E-17 136.9 11.9 108 414-523 3-110 (568)
56 1fch_A Peroxisomal targeting s 99.4 2.5E-12 8.5E-17 122.5 13.3 108 414-523 195-304 (368)
57 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 8.6E-13 3E-17 136.6 10.8 105 414-520 282-401 (457)
58 3upv_A Heat shock protein STI1 99.4 2.1E-12 7.3E-17 107.3 11.2 91 431-523 1-91 (126)
59 2kat_A Uncharacterized protein 99.4 4E-12 1.4E-16 104.6 12.6 100 418-519 3-104 (115)
60 1hh8_A P67PHOX, NCF-2, neutrop 99.4 2.4E-12 8.2E-17 114.6 12.0 104 414-522 20-139 (213)
61 2r5s_A Uncharacterized protein 99.4 3.4E-13 1.2E-17 119.6 6.3 108 414-523 54-163 (176)
62 1w3b_A UDP-N-acetylglucosamine 99.4 6.1E-12 2.1E-16 122.4 15.6 110 414-525 47-156 (388)
63 3urz_A Uncharacterized protein 99.4 4.3E-12 1.5E-16 116.2 13.7 67 414-481 68-134 (208)
64 2vq2_A PILW, putative fimbrial 99.4 4.5E-12 1.5E-16 111.4 13.3 112 412-525 54-168 (225)
65 2hr2_A Hypothetical protein; a 99.4 1.3E-12 4.6E-17 121.4 10.2 95 414-510 25-142 (159)
66 2vq2_A PILW, putative fimbrial 99.4 4.4E-12 1.5E-16 111.4 12.9 110 412-523 88-201 (225)
67 3q49_B STIP1 homology and U bo 99.4 6.1E-12 2.1E-16 104.4 12.4 94 428-523 3-96 (137)
68 3cv0_A Peroxisome targeting si 99.4 6E-12 2E-16 116.9 13.7 109 414-524 152-260 (327)
69 4abn_A Tetratricopeptide repea 99.4 1.2E-12 4E-17 135.8 9.8 109 414-524 193-312 (474)
70 3qou_A Protein YBBN; thioredox 99.4 4.6E-12 1.6E-16 122.3 13.2 108 414-523 131-274 (287)
71 2pzi_A Probable serine/threoni 99.4 4E-12 1.4E-16 138.2 14.2 108 413-522 404-519 (681)
72 3cv0_A Peroxisome targeting si 99.4 7.3E-12 2.5E-16 116.3 13.8 110 414-525 186-307 (327)
73 4abn_A Tetratricopeptide repea 99.4 1.6E-12 5.6E-17 134.7 10.4 108 414-523 151-277 (474)
74 3u4t_A TPR repeat-containing p 99.4 5.9E-12 2E-16 115.2 12.9 104 414-519 88-191 (272)
75 2ho1_A Type 4 fimbrial biogene 99.4 3.8E-12 1.3E-16 115.6 11.5 109 414-524 51-161 (252)
76 3hym_B Cell division cycle pro 99.4 6E-12 2E-16 117.0 13.0 108 414-523 104-212 (330)
77 2kck_A TPR repeat; tetratricop 99.3 5.1E-12 1.7E-16 99.5 10.7 89 414-504 20-111 (112)
78 1xnf_A Lipoprotein NLPI; TPR, 99.3 8.9E-12 3E-16 113.6 13.8 88 414-504 91-178 (275)
79 4eqf_A PEX5-related protein; a 99.3 6.9E-12 2.4E-16 120.7 13.7 108 414-523 113-266 (365)
80 3sz7_A HSC70 cochaperone (SGT) 99.3 4E-12 1.4E-16 110.8 11.0 92 430-523 7-98 (164)
81 3qky_A Outer membrane assembly 99.3 5.2E-12 1.8E-16 117.5 12.4 108 414-523 29-167 (261)
82 3u4t_A TPR repeat-containing p 99.3 2.8E-12 9.6E-17 117.4 10.3 105 414-521 17-125 (272)
83 1ihg_A Cyclophilin 40; ppiase 99.3 2.3E-12 7.7E-17 130.9 10.4 106 414-521 237-358 (370)
84 3uq3_A Heat shock protein STI1 99.3 4.2E-12 1.4E-16 113.9 10.6 109 414-524 52-193 (258)
85 2kck_A TPR repeat; tetratricop 99.3 3E-12 1E-16 100.8 8.6 93 429-523 1-96 (112)
86 3hym_B Cell division cycle pro 99.3 9.4E-12 3.2E-16 115.7 13.0 108 414-523 70-178 (330)
87 3ieg_A DNAJ homolog subfamily 99.3 9.8E-12 3.4E-16 116.2 13.1 109 414-524 17-140 (359)
88 1na3_A Designed protein CTPR2; 99.3 1.4E-11 4.9E-16 95.2 11.8 86 431-518 6-91 (91)
89 2e2e_A Formate-dependent nitri 99.3 1.8E-11 6.3E-16 107.0 12.7 93 414-507 58-152 (177)
90 2l6j_A TPR repeat-containing p 99.3 2.1E-11 7.1E-16 97.4 11.7 92 433-526 3-100 (111)
91 3mkr_A Coatomer subunit epsilo 99.3 2.5E-11 8.4E-16 118.1 14.5 105 414-520 144-250 (291)
92 2ond_A Cleavage stimulation fa 99.3 1.1E-11 3.8E-16 119.5 11.3 106 414-520 113-219 (308)
93 3mkr_A Coatomer subunit epsilo 99.3 3.5E-11 1.2E-15 117.1 14.8 94 414-508 180-273 (291)
94 4gcn_A Protein STI-1; structur 99.3 1.3E-11 4.4E-16 105.6 9.7 91 432-524 6-103 (127)
95 1p5q_A FKBP52, FK506-binding p 99.3 1.1E-12 3.8E-17 130.1 3.5 108 414-523 127-249 (336)
96 3ieg_A DNAJ homolog subfamily 99.3 3.2E-11 1.1E-15 112.8 13.0 105 414-520 51-170 (359)
97 2r5s_A Uncharacterized protein 99.3 1.2E-11 4E-16 109.6 9.2 108 414-523 20-127 (176)
98 1hh8_A P67PHOX, NCF-2, neutrop 99.3 8E-11 2.8E-15 104.7 14.5 104 413-518 50-169 (213)
99 2ond_A Cleavage stimulation fa 99.3 1.7E-11 6E-16 118.1 10.8 93 417-511 81-175 (308)
100 3fp2_A TPR repeat-containing p 99.3 3.7E-11 1.3E-15 120.4 13.3 109 413-523 289-397 (537)
101 2c2l_A CHIP, carboxy terminus 99.3 8.1E-12 2.8E-16 120.5 8.2 89 414-504 18-106 (281)
102 2if4_A ATFKBP42; FKBP-like, al 99.3 5.9E-12 2E-16 125.3 7.4 102 414-517 193-311 (338)
103 1hxi_A PEX5, peroxisome target 99.2 2.1E-11 7.3E-16 103.6 9.5 86 436-523 19-104 (121)
104 2lni_A Stress-induced-phosphop 99.2 3.4E-11 1.2E-15 97.9 9.7 92 430-523 12-103 (133)
105 2y4t_A DNAJ homolog subfamily 99.2 7E-11 2.4E-15 116.0 13.4 108 414-523 40-162 (450)
106 4g1t_A Interferon-induced prot 99.2 1.7E-10 5.7E-15 114.6 16.0 109 414-523 65-194 (472)
107 2y4t_A DNAJ homolog subfamily 99.2 1.3E-10 4.6E-15 114.0 15.1 109 414-524 74-197 (450)
108 2xpi_A Anaphase-promoting comp 99.2 9.4E-11 3.2E-15 119.7 14.4 109 414-524 387-495 (597)
109 2vyi_A SGTA protein; chaperone 99.2 5E-11 1.7E-15 95.7 9.5 94 428-523 6-99 (131)
110 1elw_A TPR1-domain of HOP; HOP 99.2 1.6E-10 5.5E-15 91.4 11.9 89 433-523 3-91 (118)
111 3edt_B KLC 2, kinesin light ch 99.2 2.8E-11 9.5E-16 109.4 8.4 108 414-523 57-188 (283)
112 2xpi_A Anaphase-promoting comp 99.2 1.4E-10 4.8E-15 118.4 14.6 108 414-523 455-569 (597)
113 2yhc_A BAMD, UPF0169 lipoprote 99.2 5.6E-11 1.9E-15 109.5 10.6 109 414-523 18-166 (225)
114 2fo7_A Synthetic consensus TPR 99.2 2.3E-10 7.9E-15 91.4 12.7 88 414-503 49-136 (136)
115 1na0_A Designed protein CTPR3; 99.2 1.8E-10 6.2E-15 91.6 12.1 93 429-523 3-96 (125)
116 3qky_A Outer membrane assembly 99.2 5.8E-11 2E-15 110.4 10.2 103 414-518 66-199 (261)
117 3fp2_A TPR repeat-containing p 99.2 8.8E-11 3E-15 117.7 11.3 107 414-523 257-363 (537)
118 2dba_A Smooth muscle cell asso 99.2 1.4E-10 4.6E-15 96.3 10.6 94 428-523 22-118 (148)
119 3ma5_A Tetratricopeptide repea 99.2 1.4E-10 4.9E-15 94.9 10.6 89 429-519 2-92 (100)
120 1kt0_A FKBP51, 51 kDa FK506-bi 99.2 6.2E-12 2.1E-16 130.3 2.8 108 414-523 248-370 (457)
121 1qqe_A Vesicular transport pro 99.2 6.8E-11 2.3E-15 113.6 9.9 106 414-521 91-216 (292)
122 2yhc_A BAMD, UPF0169 lipoprote 99.2 1.5E-10 5E-15 106.7 11.2 109 414-523 55-203 (225)
123 4g1t_A Interferon-induced prot 99.2 8.8E-11 3E-15 116.7 10.3 104 414-518 189-295 (472)
124 2fbn_A 70 kDa peptidylprolyl i 99.2 1.9E-11 6.5E-16 109.7 4.8 108 414-523 18-141 (198)
125 2gw1_A Mitochondrial precursor 99.1 1E-10 3.5E-15 115.8 10.1 109 414-523 352-468 (514)
126 3edt_B KLC 2, kinesin light ch 99.1 1.9E-10 6.4E-15 103.9 10.9 110 413-524 98-272 (283)
127 3rkv_A Putative peptidylprolyl 99.1 2E-10 6.8E-15 99.9 10.1 89 433-523 10-116 (162)
128 1elr_A TPR2A-domain of HOP; HO 99.1 1.8E-10 6.2E-15 92.7 9.1 91 431-523 1-98 (131)
129 1qqe_A Vesicular transport pro 99.1 8.3E-11 2.8E-15 113.0 8.2 110 414-524 51-178 (292)
130 1a17_A Serine/threonine protei 99.1 5.5E-10 1.9E-14 94.3 11.9 89 433-523 12-100 (166)
131 2c2l_A CHIP, carboxy terminus 99.1 2.8E-10 9.6E-15 109.7 11.2 91 431-523 1-91 (281)
132 2xev_A YBGF; tetratricopeptide 99.1 3.7E-10 1.3E-14 92.7 9.8 87 435-523 3-95 (129)
133 2kc7_A BFR218_protein; tetratr 99.1 9.5E-11 3.2E-15 93.3 6.1 81 414-504 14-95 (99)
134 2gw1_A Mitochondrial precursor 99.1 8.3E-11 2.8E-15 116.5 6.8 108 414-523 284-391 (514)
135 2hr2_A Hypothetical protein; a 99.1 3.7E-10 1.3E-14 105.0 10.4 89 434-524 11-122 (159)
136 1ouv_A Conserved hypothetical 99.1 1.4E-09 4.7E-14 101.2 14.1 105 413-524 55-170 (273)
137 2qfc_A PLCR protein; TPR, HTH, 99.0 1.4E-09 4.8E-14 103.8 13.1 108 414-523 129-255 (293)
138 2ooe_A Cleavage stimulation fa 99.0 9.6E-10 3.3E-14 113.5 11.2 108 413-521 334-442 (530)
139 3nf1_A KLC 1, kinesin light ch 99.0 2.9E-10 9.9E-15 104.8 6.5 109 414-524 83-215 (311)
140 3ro3_A PINS homolog, G-protein 99.0 4.6E-10 1.6E-14 92.5 6.9 109 414-524 23-149 (164)
141 3nf1_A KLC 1, kinesin light ch 99.0 4E-10 1.4E-14 103.8 7.0 110 413-524 124-298 (311)
142 1ouv_A Conserved hypothetical 99.0 4.3E-09 1.5E-13 97.9 14.0 105 413-524 91-206 (273)
143 2l6j_A TPR repeat-containing p 99.0 2.3E-10 7.9E-15 91.2 4.7 80 414-495 18-103 (111)
144 4a1s_A PINS, partner of inscut 99.0 4.5E-10 1.5E-14 109.2 7.4 104 414-519 62-181 (411)
145 2kc7_A BFR218_protein; tetratr 99.0 4.7E-09 1.6E-13 83.4 11.6 86 438-525 4-92 (99)
146 3u3w_A Transcriptional activat 99.0 9E-10 3.1E-14 105.1 8.4 107 414-522 129-255 (293)
147 3k9i_A BH0479 protein; putativ 99.0 1.8E-10 6.1E-15 95.7 2.8 76 448-524 3-81 (117)
148 1na3_A Designed protein CTPR2; 99.0 6.3E-09 2.1E-13 80.2 10.9 67 414-481 23-89 (91)
149 3ulq_A Response regulator aspa 98.9 1.2E-09 4E-14 107.2 8.4 108 414-523 157-283 (383)
150 3qou_A Protein YBBN; thioredox 98.9 4.3E-09 1.5E-13 101.5 11.7 94 429-524 112-239 (287)
151 3rjv_A Putative SEL1 repeat pr 98.9 2.9E-09 1E-13 98.0 10.0 100 414-517 67-175 (212)
152 3ro2_A PINS homolog, G-protein 98.9 1E-09 3.5E-14 100.7 6.9 107 414-522 19-141 (338)
153 1dce_A Protein (RAB geranylger 98.9 1.2E-08 4.2E-13 109.9 16.2 149 368-520 21-194 (567)
154 3gw4_A Uncharacterized protein 98.9 1.3E-09 4.3E-14 95.4 6.8 108 414-523 40-166 (203)
155 3rjv_A Putative SEL1 repeat pr 98.9 1.7E-09 5.9E-14 99.6 7.7 97 414-516 32-137 (212)
156 2ooe_A Cleavage stimulation fa 98.9 3.6E-09 1.2E-13 109.2 10.4 92 418-511 304-397 (530)
157 3ulq_A Response regulator aspa 98.9 1.1E-09 3.7E-14 107.4 6.1 109 414-524 117-244 (383)
158 2qfc_A PLCR protein; TPR, HTH, 98.9 1.6E-08 5.4E-13 96.5 13.9 109 414-524 89-216 (293)
159 3sf4_A G-protein-signaling mod 98.9 2E-09 6.8E-14 103.0 7.5 104 414-519 23-142 (406)
160 3sf4_A G-protein-signaling mod 98.9 1.5E-09 5.2E-14 103.8 6.6 108 414-523 201-326 (406)
161 2ifu_A Gamma-SNAP; membrane fu 98.9 1.9E-09 6.6E-14 104.2 6.6 109 414-525 90-216 (307)
162 3gw4_A Uncharacterized protein 98.9 4.6E-09 1.6E-13 91.8 8.3 109 413-524 5-127 (203)
163 2if4_A ATFKBP42; FKBP-like, al 98.9 1.1E-09 3.7E-14 108.9 4.8 92 413-505 243-334 (338)
164 3bee_A Putative YFRE protein; 98.8 8.4E-09 2.9E-13 86.4 9.0 74 430-505 2-78 (93)
165 2ifu_A Gamma-SNAP; membrane fu 98.8 2.5E-09 8.7E-14 103.4 6.5 103 414-520 129-248 (307)
166 3ro2_A PINS homolog, G-protein 98.8 2.7E-09 9.1E-14 97.9 5.4 109 414-524 197-323 (338)
167 3dra_A Protein farnesyltransfe 98.8 4.8E-08 1.6E-12 98.3 14.4 103 415-519 84-195 (306)
168 2kat_A Uncharacterized protein 98.8 6.6E-09 2.3E-13 85.2 6.4 71 452-523 2-72 (115)
169 3u3w_A Transcriptional activat 98.8 8.9E-09 3.1E-13 98.2 8.2 110 414-525 89-217 (293)
170 1dce_A Protein (RAB geranylger 98.8 3.1E-08 1.1E-12 106.8 13.2 102 415-518 44-157 (567)
171 4a1s_A PINS, partner of inscut 98.8 4.3E-09 1.5E-13 102.3 5.6 108 414-523 100-242 (411)
172 1ihg_A Cyclophilin 40; ppiase 98.8 1E-08 3.6E-13 104.0 8.6 88 434-523 223-326 (370)
173 3q15_A PSP28, response regulat 98.8 8.2E-09 2.8E-13 101.5 7.6 108 414-523 155-280 (378)
174 1wao_1 Serine/threonine protei 98.7 2.1E-09 7.3E-14 112.4 2.4 89 433-523 5-93 (477)
175 3dra_A Protein farnesyltransfe 98.7 1E-07 3.6E-12 95.8 14.0 106 414-521 124-237 (306)
176 1klx_A Cysteine rich protein B 98.7 7.8E-08 2.7E-12 83.9 10.9 80 415-499 40-126 (138)
177 1klx_A Cysteine rich protein B 98.7 1.8E-07 6.3E-12 81.5 13.2 100 414-522 9-115 (138)
178 3dss_A Geranylgeranyl transfer 98.7 4E-07 1.4E-11 93.1 17.5 146 369-519 23-194 (331)
179 1zu2_A Mitochondrial import re 98.7 2E-08 7E-13 93.3 7.2 70 448-518 15-94 (158)
180 3u64_A Protein TP_0956; tetrat 98.7 3.7E-08 1.3E-12 100.2 9.7 89 414-503 177-273 (301)
181 1hz4_A MALT regulatory protein 98.7 4E-08 1.4E-12 95.3 8.9 108 414-523 28-154 (373)
182 1pc2_A Mitochondria fission pr 98.7 9.3E-08 3.2E-12 88.5 10.8 96 414-511 12-112 (152)
183 1hz4_A MALT regulatory protein 98.7 4.3E-08 1.5E-12 95.0 8.7 108 414-523 67-193 (373)
184 3q7a_A Farnesyltransferase alp 98.6 1.9E-07 6.4E-12 96.3 12.6 106 415-521 69-176 (349)
185 3e4b_A ALGK; tetratricopeptide 98.6 1.1E-07 3.9E-12 97.9 10.2 95 414-516 231-330 (452)
186 4f3v_A ESX-1 secretion system 98.6 2.5E-08 8.5E-13 100.2 4.6 94 414-510 149-247 (282)
187 3e4b_A ALGK; tetratricopeptide 98.6 1.8E-07 6.2E-12 96.4 11.1 95 413-516 264-366 (452)
188 3qww_A SET and MYND domain-con 98.6 1.9E-07 6.5E-12 98.1 11.4 95 412-508 310-425 (433)
189 2v5f_A Prolyl 4-hydroxylase su 98.6 5.4E-07 1.9E-11 75.2 11.8 81 433-515 4-91 (104)
190 2xm6_A Protein corresponding t 98.6 4.2E-07 1.4E-11 92.9 13.3 102 414-522 310-421 (490)
191 3q15_A PSP28, response regulat 98.6 1.6E-07 5.4E-12 92.4 9.7 105 413-519 195-315 (378)
192 3ro3_A PINS homolog, G-protein 98.6 2.2E-07 7.7E-12 76.3 8.9 87 414-502 63-161 (164)
193 3n71_A Histone lysine methyltr 98.6 1.3E-07 4.5E-12 100.8 9.3 106 412-519 321-450 (490)
194 3dss_A Geranylgeranyl transfer 98.5 7.5E-07 2.6E-11 91.0 13.9 104 416-520 46-160 (331)
195 2xm6_A Protein corresponding t 98.5 7.9E-07 2.7E-11 90.9 14.0 97 413-516 92-195 (490)
196 3ly7_A Transcriptional activat 98.5 9.2E-07 3.1E-11 92.3 12.4 106 413-520 212-326 (372)
197 3q7a_A Farnesyltransferase alp 98.4 8.5E-07 2.9E-11 91.5 11.7 104 415-519 104-216 (349)
198 3qwp_A SET and MYND domain-con 98.4 1.1E-06 3.7E-11 91.9 10.7 103 413-517 300-426 (429)
199 3ma5_A Tetratricopeptide repea 98.4 5.2E-07 1.8E-11 73.6 6.5 59 464-523 2-60 (100)
200 4f3v_A ESX-1 secretion system 98.3 2.3E-06 8E-11 85.9 9.9 109 413-524 115-228 (282)
201 3u64_A Protein TP_0956; tetrat 98.2 2.5E-06 8.4E-11 86.9 9.3 92 430-521 148-257 (301)
202 2v5f_A Prolyl 4-hydroxylase su 98.2 5E-06 1.7E-10 69.3 9.5 63 414-477 19-88 (104)
203 4b4t_Q 26S proteasome regulato 97.9 6.4E-06 2.2E-10 80.8 4.9 109 414-524 18-155 (434)
204 3bee_A Putative YFRE protein; 97.9 2.3E-05 7.9E-10 65.3 6.4 59 465-523 2-62 (93)
205 3n71_A Histone lysine methyltr 97.8 5.7E-05 1.9E-09 80.6 10.1 87 412-500 363-465 (490)
206 1nzn_A CGI-135 protein, fissio 97.8 0.00011 3.8E-09 66.2 9.8 93 414-508 15-112 (126)
207 1pc2_A Mitochondria fission pr 97.8 0.00012 4E-09 67.8 10.2 101 369-477 11-113 (152)
208 3mv2_B Coatomer subunit epsilo 97.7 9.1E-05 3.1E-09 75.3 9.5 105 414-522 114-229 (310)
209 4e6h_A MRNA 3'-END-processing 97.7 0.00012 4.1E-09 81.2 10.6 105 415-521 324-451 (679)
210 3qww_A SET and MYND domain-con 97.7 4.1E-05 1.4E-09 80.5 6.5 78 448-526 311-404 (433)
211 4b4t_Q 26S proteasome regulato 97.6 7.2E-05 2.4E-09 73.3 7.0 108 413-522 108-234 (434)
212 4e6h_A MRNA 3'-END-processing 97.6 0.00012 4.1E-09 81.1 9.6 108 413-521 391-521 (679)
213 1xi4_A Clathrin heavy chain; a 97.6 0.00015 5E-09 86.7 10.4 94 414-520 1090-1183(1630)
214 3ly7_A Transcriptional activat 97.5 0.00043 1.5E-08 72.3 11.0 99 425-523 185-296 (372)
215 3mv2_B Coatomer subunit epsilo 97.5 0.00026 9E-09 72.0 8.7 98 419-518 85-190 (310)
216 3qwp_A SET and MYND domain-con 97.5 0.00021 7.1E-09 74.7 8.0 79 447-526 299-393 (429)
217 2uy1_A Cleavage stimulation fa 97.3 0.0014 4.7E-08 69.3 12.2 107 414-523 227-373 (493)
218 2uy1_A Cleavage stimulation fa 97.1 0.0036 1.2E-07 66.1 12.2 100 416-519 195-334 (493)
219 1b89_A Protein (clathrin heavy 97.0 0.0018 6.2E-08 69.1 8.9 93 414-517 162-254 (449)
220 1xi4_A Clathrin heavy chain; a 96.9 0.0014 4.6E-08 78.7 8.3 110 414-524 1235-1375(1630)
221 1b89_A Protein (clathrin heavy 96.8 0.00068 2.3E-08 72.3 4.1 106 412-522 189-300 (449)
222 4h7y_A Dual specificity protei 96.6 0.0064 2.2E-07 56.9 8.3 88 417-507 36-131 (161)
223 1y8m_A FIS1; mitochondria, unk 96.4 0.0098 3.4E-07 54.8 8.6 93 414-508 20-115 (144)
224 4h7y_A Dual specificity protei 96.2 0.018 6.2E-07 53.9 9.3 59 414-473 74-132 (161)
225 3o48_A Mitochondria fission 1 96.1 0.021 7.1E-07 52.1 9.0 94 414-509 21-117 (134)
226 1nzn_A CGI-135 protein, fissio 96.1 0.0074 2.5E-07 54.3 5.6 65 412-477 50-116 (126)
227 3ffl_A Anaphase-promoting comp 96.0 0.02 6.7E-07 53.9 8.5 99 413-514 33-165 (167)
228 4g26_A Pentatricopeptide repea 95.8 0.29 1E-05 51.8 17.5 148 367-525 41-196 (501)
229 3o48_A Mitochondria fission 1 95.7 0.025 8.7E-07 51.5 7.5 65 412-477 55-120 (134)
230 1zbp_A Hypothetical protein VP 95.7 0.1 3.5E-06 52.6 12.5 63 413-476 10-72 (273)
231 1ya0_A SMG-7 transcript varian 95.6 0.045 1.5E-06 58.9 10.2 65 414-479 166-230 (497)
232 1y8m_A FIS1; mitochondria, unk 95.1 0.068 2.3E-06 49.2 8.2 65 412-477 54-119 (144)
233 3ffl_A Anaphase-promoting comp 94.1 0.095 3.2E-06 49.3 6.9 81 442-524 28-142 (167)
234 4gns_B Protein CSD3, chitin bi 94.0 0.14 4.8E-06 57.8 9.4 106 416-523 265-390 (754)
235 3mkq_A Coatomer beta'-subunit; 93.9 0.3 1E-05 51.8 11.2 107 414-526 666-805 (814)
236 1ya0_A SMG-7 transcript varian 93.5 0.17 5.7E-06 54.5 8.4 80 436-517 154-233 (497)
237 4g26_A Pentatricopeptide repea 91.7 2.9 9.9E-05 44.2 15.0 120 370-505 88-212 (501)
238 2ff4_A Probable regulatory pro 91.2 2.6 8.8E-05 43.1 13.6 61 436-498 173-233 (388)
239 1zbp_A Hypothetical protein VP 90.5 1.1 3.8E-05 45.1 9.8 66 447-513 9-74 (273)
240 4gns_B Protein CSD3, chitin bi 85.9 2 6.7E-05 48.7 9.0 59 436-496 339-397 (754)
241 3mkq_B Coatomer subunit alpha; 80.5 13 0.00045 34.9 10.9 42 414-461 19-60 (177)
242 3mkq_A Coatomer beta'-subunit; 76.0 9 0.00031 40.6 9.3 76 433-518 654-737 (814)
243 2o8p_A 14-3-3 domain containin 74.1 13 0.00044 36.5 9.2 50 414-463 139-196 (227)
244 2ff4_A Probable regulatory pro 71.6 8 0.00027 39.4 7.4 50 413-463 184-233 (388)
245 3kae_A CDC27, possible protein 70.6 35 0.0012 33.0 11.0 86 414-506 47-150 (242)
246 4fhn_B Nucleoporin NUP120; pro 69.3 25 0.00085 40.9 11.7 97 426-524 834-958 (1139)
247 2br9_A 14-3-3E, 14-3-3 protein 67.0 11 0.00038 36.9 7.0 25 438-462 176-200 (234)
248 3mkq_B Coatomer subunit alpha; 66.9 20 0.00069 33.7 8.4 55 432-496 6-60 (177)
249 3iqu_A 14-3-3 protein sigma; s 65.7 12 0.00042 36.8 7.0 46 417-462 150-203 (236)
250 2npm_A 14-3-3 domain containin 65.2 12 0.00043 37.2 7.0 47 417-463 173-226 (260)
251 3uzd_A 14-3-3 protein gamma; s 64.1 14 0.00047 36.7 7.0 19 474-492 178-196 (248)
252 1o9d_A 14-3-3-like protein C; 63.9 14 0.00047 36.9 7.0 46 417-462 152-205 (260)
253 2br9_A 14-3-3E, 14-3-3 protein 61.8 18 0.00063 35.4 7.4 47 452-498 147-201 (234)
254 3txn_A 26S proteasome regulato 61.2 21 0.00071 37.3 8.1 120 369-499 76-210 (394)
255 4b4t_P 26S proteasome regulato 61.0 98 0.0034 32.1 13.3 84 414-499 151-247 (445)
256 3spa_A Mtrpol, DNA-directed RN 60.3 76 0.0026 37.7 13.2 90 414-505 141-238 (1134)
257 3ubw_A 14-3-3E, 14-3-3 protein 60.2 17 0.0006 36.3 7.0 33 464-496 190-225 (261)
258 2npm_A 14-3-3 domain containin 60.2 20 0.00068 35.8 7.4 47 452-498 173-226 (260)
259 2wpv_A GET4, UPF0363 protein Y 60.1 18 0.00063 36.6 7.3 108 389-498 87-216 (312)
260 3iqu_A 14-3-3 protein sigma; s 60.0 20 0.00069 35.2 7.3 48 451-498 149-204 (236)
261 3kae_A CDC27, possible protein 59.3 90 0.0031 30.3 11.4 102 412-523 14-133 (242)
262 4b4t_R RPN7, 26S proteasome re 59.3 42 0.0014 34.6 10.0 85 414-500 145-238 (429)
263 1o9d_A 14-3-3-like protein C; 58.3 22 0.00076 35.4 7.4 47 452-498 152-206 (260)
264 3uzd_A 14-3-3 protein gamma; s 58.3 23 0.00077 35.1 7.4 48 416-463 147-202 (248)
265 1wy6_A Hypothetical protein ST 57.5 46 0.0016 31.2 8.7 80 414-499 75-154 (172)
266 3efz_A 14-3-3 protein; 14-3-3, 55.4 15 0.00051 36.9 5.6 49 451-499 175-226 (268)
267 3ubw_A 14-3-3E, 14-3-3 protein 54.4 28 0.00097 34.7 7.4 48 416-463 172-227 (261)
268 2w2u_A Hypothetical P60 katani 51.6 22 0.00075 29.3 5.2 15 448-462 32-46 (83)
269 2o8p_A 14-3-3 domain containin 51.3 44 0.0015 32.7 8.1 52 448-499 138-197 (227)
270 2v6y_A AAA family ATPase, P60 50.7 23 0.00079 29.0 5.2 11 453-463 10-20 (83)
271 1qsa_A Protein (soluble lytic 48.5 42 0.0014 36.9 8.3 80 416-498 268-347 (618)
272 3efz_A 14-3-3 protein; 14-3-3, 48.4 25 0.00084 35.3 5.9 48 416-463 168-225 (268)
273 4b4t_S RPN3, 26S proteasome re 47.2 14 0.00048 40.2 4.2 72 430-504 226-304 (523)
274 4b4t_R RPN7, 26S proteasome re 43.6 48 0.0016 34.2 7.4 105 415-521 109-225 (429)
275 3lpz_A GET4 (YOR164C homolog); 42.6 1.2E+02 0.004 31.2 10.0 108 389-498 89-215 (336)
276 2ijq_A Hypothetical protein; s 40.8 1E+02 0.0035 28.5 8.4 57 441-498 39-103 (161)
277 3esl_A Checkpoint serine/threo 39.7 65 0.0022 31.0 7.1 84 430-516 76-162 (202)
278 1wfd_A Hypothetical protein 15 39.5 43 0.0015 28.0 5.2 17 447-463 27-43 (93)
279 4a5x_A MITD1, MIT domain-conta 38.6 40 0.0014 27.9 4.8 17 447-463 28-44 (86)
280 2cpt_A SKD1 protein, vacuolar 36.7 46 0.0016 29.1 5.1 17 447-463 30-46 (117)
281 2v6x_A Vacuolar protein sortin 36.6 52 0.0018 26.6 5.2 17 447-463 25-41 (85)
282 3txn_A 26S proteasome regulato 31.7 1.1E+02 0.0039 31.7 8.0 82 439-522 104-199 (394)
283 3re2_A Predicted protein; meni 31.3 85 0.0029 33.3 6.8 43 419-462 276-323 (472)
284 2v6y_A AAA family ATPase, P60 30.2 80 0.0027 25.7 5.3 14 416-429 8-21 (83)
285 2w2u_A Hypothetical P60 katani 29.5 83 0.0028 25.8 5.3 16 453-468 44-59 (83)
286 2cpt_A SKD1 protein, vacuolar 29.0 2.9E+02 0.0097 24.0 9.5 49 416-473 15-63 (117)
287 4gq2_M Nucleoporin NUP120; bet 28.6 3.5E+02 0.012 30.9 12.0 81 424-505 830-933 (950)
288 4b4t_S RPN3, 26S proteasome re 26.1 40 0.0014 36.7 3.5 53 414-469 245-304 (523)
289 1cn3_F Fragment of coat protei 25.5 24 0.00081 23.8 1.0 9 311-319 1-9 (29)
290 4gq4_A Menin; tumor suppressor 25.3 1.5E+02 0.0051 32.0 7.4 45 418-463 282-331 (489)
291 2wpv_A GET4, UPF0363 protein Y 24.8 1.9E+02 0.0066 29.1 8.0 109 414-523 27-153 (312)
292 3spa_A Mtrpol, DNA-directed RN 24.7 5.3E+02 0.018 30.8 12.6 81 437-520 130-216 (1134)
293 2cwy_A Hypothetical protein TT 24.1 1.7E+02 0.0059 24.4 6.4 56 440-498 7-67 (94)
294 3ax2_A Mitochondrial import re 24.1 1.6E+02 0.0054 24.0 5.9 33 440-473 23-55 (73)
295 3u84_A Menin; MLL, JUND, ledgf 23.8 1.3E+02 0.0046 32.5 6.8 65 432-498 275-346 (550)
296 4a5x_A MITD1, MIT domain-conta 23.4 1.1E+02 0.0037 25.2 4.9 44 416-468 13-56 (86)
297 4b4t_O 26S proteasome regulato 23.3 3E+02 0.01 28.0 9.3 85 413-498 89-197 (393)
298 1qsa_A Protein (soluble lytic 23.2 3.3E+02 0.011 29.8 10.1 106 414-521 228-336 (618)
299 3t5x_A PCI domain-containing p 22.6 1.7E+02 0.0057 27.4 6.7 19 414-432 28-46 (203)
300 2i7u_A Four-alpha-helix bundle 22.4 27 0.00093 27.0 1.0 9 311-319 28-36 (62)
301 1wfd_A Hypothetical protein 15 21.6 1.4E+02 0.0047 24.8 5.3 46 415-469 11-56 (93)
302 1wy6_A Hypothetical protein ST 21.4 2E+02 0.0067 27.0 6.6 50 414-464 105-154 (172)
303 2ca5_A MXIH; transport protein 20.8 58 0.002 27.5 2.7 51 466-516 6-56 (85)
304 2dl1_A Spartin; SPG20, MIT, st 20.8 63 0.0022 28.7 3.1 19 507-525 81-99 (116)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.73 E-value=4.7e-17 Score=139.95 Aligned_cols=99 Identities=20% Similarity=0.326 Sum_probs=94.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|+|++|+.+|++||+++|+++.+|+++|.++. ..|++++|+.+|++||+++|+++.+++++|.++... |++++|+++|
T Consensus 27 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~-~~~~~A~~~~ 104 (126)
T 4gco_A 27 GDYPTAMRHYNEAVKRDPENAILYSNRAACLT-KLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAM-REWSKAQRAY 104 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHH-hhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHC-CCHHHHHHHH
Confidence 89999999999999999999999999999888 699999999999999999999999999999998875 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHH
Q 009385 494 LEAISADPTNSYYAANYANFL 514 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L 514 (536)
++|++++|+|++++.+++.+|
T Consensus 105 ~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 105 EDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHCcCCHHHHHHHHHhc
Confidence 999999999999999998875
No 2
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.66 E-value=2.1e-16 Score=138.82 Aligned_cols=104 Identities=15% Similarity=0.128 Sum_probs=90.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHH-H
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEE-T 492 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee-~ 492 (536)
++|++|+.+|+++|+++|+++.+|+++|.++. ..|++++|+.+|+++++++|++++++.++|.++... |++++|.. +
T Consensus 45 ~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~-~~~~~aa~~~ 122 (150)
T 4ga2_A 45 KEYDLAKKYICTYINVQERDPKAHRFLGLLYE-LEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKN-DVTDGRAKYW 122 (150)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-CSSSSHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CChHHHHHHH
Confidence 89999999999999999999999999998877 689999999999999999999999999999888775 47766554 5
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009385 493 FLEAISADPTNSYYAANYANFLWNTGG 519 (536)
Q Consensus 493 feKALeLDPdNpeal~NyA~~L~elGr 519 (536)
+++|++++|+++.++...+.++...|+
T Consensus 123 ~~~al~l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 123 VERAAKLFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHHhCc
Confidence 689999999999998888988888876
No 3
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.65 E-value=1.9e-15 Score=132.66 Aligned_cols=107 Identities=20% Similarity=0.194 Sum_probs=101.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+..|++++..+|+++.+++++|.+++ ..|++++|+++|+++|+++|+++.++.++|.++... |++++|+.+|
T Consensus 11 ~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~-~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~-~~~~~A~~~~ 88 (150)
T 4ga2_A 11 ADVERYIASVQGSTPSPRQKSIKGFYFAKLYY-EAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELE-ENTDKAVECY 88 (150)
T ss_dssp HHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred ChHHHHHHHHHHhcccCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CchHHHHHHH
Confidence 78999999999999999999999999999988 699999999999999999999999999999988775 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDT 522 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~ 522 (536)
++|++++|+++.++.++|.++...|+.++
T Consensus 89 ~~al~~~p~~~~~~~~la~~~~~~~~~~~ 117 (150)
T 4ga2_A 89 RRSVELNPTQKDLVLKIAELLCKNDVTDG 117 (150)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHCSSSS
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCChHH
Confidence 99999999999999999999999998653
No 4
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.63 E-value=2.9e-15 Score=138.20 Aligned_cols=109 Identities=14% Similarity=0.007 Sum_probs=95.8
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVA-----------HDYDRAEEYFKRAIAVEPPDAESFSKYASFLWR 481 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~-----------GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e 481 (536)
.|++++|+.+|+++++++|+++.+++++|.++. .. |++++|+.+|+++++++|+++.++.++|.++..
T Consensus 52 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~-~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~ 130 (217)
T 2pl2_A 52 LGLVNPALENGKTLVARTPRYLGGYMVLSEAYV-ALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYAL 130 (217)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 388999999999999999999999999998877 57 899999999999999999999999999988876
Q ss_pred hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcccc
Q 009385 482 VRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 482 ~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~cl 524 (536)
. |++++|+++|++|++++ +++.++.++|.++..+|+.+++.
T Consensus 131 ~-g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~ 171 (217)
T 2pl2_A 131 L-GERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEAL 171 (217)
T ss_dssp T-TCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHH
T ss_pred c-CChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHH
Confidence 4 68999999999999999 89999999999999999876543
No 5
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.61 E-value=7.8e-15 Score=135.27 Aligned_cols=112 Identities=18% Similarity=0.169 Sum_probs=96.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|++++|+..|++|++++|+++.++.++|.++. ..|++++|+.+|++|++++ +++.++.++|.++... |++++|+.+|
T Consensus 98 g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~-g~~~~A~~~~ 174 (217)
T 2pl2_A 98 GYLEQALSVLKDAERVNPRYAPLHLQRGLVYA-LLGERDKAEASLKQALALE-DTPEIRSALAELYLSM-GRLDEALAQY 174 (217)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHH-TCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHc-CCHHHHHHHH
Confidence 89999999999999999999999999999888 6999999999999999999 9999999999988875 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCccccCCCC
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTCFPLSS 528 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~clpl~~ 528 (536)
+++++++|+++.++.++|.++...|+.+++....+
T Consensus 175 ~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~ 209 (217)
T 2pl2_A 175 AKALEQAPKDLDLRVRYASALLLKGKAEEAARAAA 209 (217)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHTC------------
T ss_pred HHHHHhCCCChHHHHHHHHHHHHccCHHHHHHHHH
Confidence 99999999999999999999999999887765443
No 6
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.61 E-value=4.7e-15 Score=135.88 Aligned_cols=104 Identities=12% Similarity=0.116 Sum_probs=98.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHH----------------HHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLAN----------------YAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYAS 477 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~N----------------LA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~ 477 (536)
|++++|+.+|+++++++|+++.++++ +|.++. ..|++++|+.+|+++++++|+++.++.++|.
T Consensus 18 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 96 (208)
T 3urz_A 18 GQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYK-KNRNYDKAYLFYKELLQKAPNNVDCLEACAE 96 (208)
T ss_dssp TCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 89999999999999999999999999 998887 6999999999999999999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009385 478 FLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGG 519 (536)
Q Consensus 478 ~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr 519 (536)
++... |++++|+.+|+++++++|+++.++.++|.+++..|+
T Consensus 97 ~~~~~-g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~ 137 (208)
T 3urz_A 97 MQVCR-GQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAE 137 (208)
T ss_dssp HHHHH-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHc-CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhH
Confidence 98875 699999999999999999999999999999987764
No 7
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.60 E-value=3.2e-14 Score=114.50 Aligned_cols=106 Identities=18% Similarity=0.263 Sum_probs=100.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|++++..+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++..+|.++... |++++|+.+|
T Consensus 26 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~ 103 (131)
T 2vyi_A 26 ENFEAAVHFYGKAIELNPANAVYFCNRAAAYS-KLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSL-NKHVEAVAYY 103 (131)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHh-CCHHHHHHHH
Confidence 79999999999999999999999999999887 699999999999999999999999999999988774 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGED 521 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E 521 (536)
+++++++|+++.++.+++.++..+|+.+
T Consensus 104 ~~~~~~~p~~~~~~~~l~~~~~~~~~~~ 131 (131)
T 2vyi_A 104 KKALELDPDNETYKSNLKIAELKLREAP 131 (131)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhcCccchHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999998864
No 8
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.60 E-value=1.3e-14 Score=161.03 Aligned_cols=109 Identities=18% Similarity=0.156 Sum_probs=102.8
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
.|++++|+.+|++||+++|+++.+|+|+|.++. ..|++++|+++|++||+++|+++++++++|.++... |++++|+++
T Consensus 56 ~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~-~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~-g~~~eAi~~ 133 (723)
T 4gyw_A 56 QGKLQEALMHYKEAIRISPTFADAYSNMGNTLK-EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDS-GNIPEAIAS 133 (723)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHHHH
Confidence 389999999999999999999999999999888 699999999999999999999999999999988774 699999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 493 FLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 493 feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
|++|++++|+++.++.++|.+|..+|+.+++
T Consensus 134 ~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A 164 (723)
T 4gyw_A 134 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDY 164 (723)
T ss_dssp HHHHHHHCSCCHHHHHHHHHHHHHTTCCTTH
T ss_pred HHHHHHhCCCChHHHhhhhhHHHhcccHHHH
Confidence 9999999999999999999999999987643
No 9
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.60 E-value=2.2e-14 Score=147.07 Aligned_cols=107 Identities=8% Similarity=0.025 Sum_probs=98.6
Q ss_pred CC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 414 AD-YFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 414 gd-yeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
++ +++|+.+|++||+++|+++.+|+++|.++. ..|++++|+.+|++||+++|+|..+|+++|.++... |++++|+++
T Consensus 145 g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~-~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~-g~~~eAl~~ 222 (382)
T 2h6f_A 145 QKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVE-WLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEF-KLWDNELQY 222 (382)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-TCCTTHHHH
T ss_pred ccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHc-CChHHHHHH
Confidence 65 999999999999999999999999999887 689999999999999999999999999999988875 699999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHH-cCCCcc
Q 009385 493 FLEAISADPTNSYYAANYANFLWN-TGGEDT 522 (536)
Q Consensus 493 feKALeLDPdNpeal~NyA~~L~e-lGr~E~ 522 (536)
|++||+++|+++.+++++|.+|.. .|..++
T Consensus 223 ~~~al~l~P~~~~a~~~lg~~l~~l~~~~~e 253 (382)
T 2h6f_A 223 VDQLLKEDVRNNSVWNQRYFVISNTTGYNDR 253 (382)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCSCSH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHhcCcchH
Confidence 999999999999999999999999 444243
No 10
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.59 E-value=6.1e-15 Score=163.58 Aligned_cols=108 Identities=21% Similarity=0.243 Sum_probs=103.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|++++|+.+|++||+++|+++.+|+|+|.++. ..|++++|+++|++||+++|+++++++++|.++... |++++|+++|
T Consensus 23 G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~-~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~-g~~~~A~~~~ 100 (723)
T 4gyw_A 23 GNIEEAVRLYRKALEVFPEFAAAHSNLASVLQ-QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEM-QDVQGALQCY 100 (723)
T ss_dssp TCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHHHHH
Confidence 89999999999999999999999999999888 699999999999999999999999999999998875 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
++|++++|+++.++.++|.+|.++|+.+++
T Consensus 101 ~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eA 130 (723)
T 4gyw_A 101 TRAIQINPAFADAHSNLASIHKDSGNIPEA 130 (723)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999999999999997654
No 11
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.59 E-value=1.3e-15 Score=137.19 Aligned_cols=111 Identities=12% Similarity=0.114 Sum_probs=93.6
Q ss_pred cccccHHHHHHhcCccccccCccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC
Q 009385 389 DESLDHETMERFVSPVTANIEADDYADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD 468 (536)
Q Consensus 389 d~~lD~ea~krlvspV~AeLepDd~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd 468 (536)
...++|+....+.....+.. ..|++++|+.+|++++.++|+++.+|+++|.++. ..|++++|+.+|++|++++|++
T Consensus 28 al~l~p~~~~~~~~lg~~~~---~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~Ai~~~~~al~l~P~~ 103 (151)
T 3gyz_A 28 INAIPDDMMDDIYSYAYDFY---NKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQ-IKEQFQQAADLYAVAFALGKND 103 (151)
T ss_dssp GCCSCHHHHHHHHHHHHHHH---HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSSSC
T ss_pred HhCCCHHHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCCCC
Confidence 34566666654444332222 3389999999999999999999999999998887 6999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 009385 469 AESFSKYASFLWRVRNDLWAAEETFLEAISADPTNS 504 (536)
Q Consensus 469 aeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNp 504 (536)
+.+++++|.++... |++++|+.+|++|++++|+.+
T Consensus 104 ~~~~~~lg~~~~~l-g~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 104 YTPVFHTGQCQLRL-KAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp CHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCCCHH
T ss_pred cHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCHH
Confidence 99999999988874 699999999999999999876
No 12
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.59 E-value=2.4e-14 Score=119.05 Aligned_cols=101 Identities=19% Similarity=0.145 Sum_probs=95.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++... |++++|+.+|
T Consensus 18 ~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-~~~~~A~~~~ 95 (126)
T 3upv_A 18 SDWPNAVKAYTEMIKRAPEDARGYSNRAAALA-KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAV-KEYASALETL 95 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH-hCHHHHHHHH
Confidence 89999999999999999999999999999888 699999999999999999999999999999988875 6999999999
Q ss_pred HHHHHhC------CCCHHHHHHHHHHHHH
Q 009385 494 LEAISAD------PTNSYYAANYANFLWN 516 (536)
Q Consensus 494 eKALeLD------PdNpeal~NyA~~L~e 516 (536)
+++++++ |+++.++..++.+...
T Consensus 96 ~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 96 DAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 9999999 9999999888887654
No 13
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.57 E-value=2.4e-14 Score=116.67 Aligned_cols=104 Identities=19% Similarity=0.261 Sum_probs=98.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|+++++.+|++..++.++|.++. ..|++++|+++|+++++++|+++.++.++|.++... |++++|+.+|
T Consensus 30 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~-~~~~~A~~~~ 107 (133)
T 2lni_A 30 GDYPQAMKHYTEAIKRNPKDAKLYSNRAACYT-KLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAM-KDYTKAMDVY 107 (133)
T ss_dssp TCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHT-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH-hhHHHHHHHH
Confidence 79999999999999999999999999999887 689999999999999999999999999999988774 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGG 519 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr 519 (536)
+++++++|+++.++.+++.++...|+
T Consensus 108 ~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 108 QKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 99999999999999999999988774
No 14
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.57 E-value=2.9e-14 Score=124.42 Aligned_cols=98 Identities=21% Similarity=0.284 Sum_probs=90.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
++|++|+.+|+++++++|+++.+++++|.+++ ..|++++|+.+|+++++++|+++.+++++|.++... |++++|+.+|
T Consensus 25 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-g~~~~A~~~~ 102 (164)
T 3sz7_A 25 KEYSKAIDLYTQALSIAPANPIYLSNRAAAYS-ASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDM-ADYKGAKEAY 102 (164)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-cCHHHHHHHH
Confidence 89999999999999999999999999999888 699999999999999999999999999999998875 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHH
Q 009385 494 LEAISADPTNSYYAANYANF 513 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~ 513 (536)
+++++++|+++.++.+.+..
T Consensus 103 ~~al~~~p~~~~~~~~~~l~ 122 (164)
T 3sz7_A 103 EKGIEAEGNGGSDAMKRGLE 122 (164)
T ss_dssp HHHHHHHSSSCCHHHHHHHH
T ss_pred HHHHHhCCCchHHHHHHHHH
Confidence 99999999998855554444
No 15
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.55 E-value=5.1e-15 Score=130.25 Aligned_cols=94 Identities=13% Similarity=0.104 Sum_probs=86.5
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
.|++++|+.+|++++.++|+++.+|+++|.++. ..|++++|+.+|+++++++|+++.+++++|.++... |++++|+.+
T Consensus 34 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~-g~~~~A~~~ 111 (148)
T 2vgx_A 34 SGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQ-AMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQX-GELAEAESG 111 (148)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHT-TCHHHHHHH
T ss_pred cCChHHHHHHHHHHHHcCcccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHc-CCHHHHHHH
Confidence 389999999999999999999999999998887 699999999999999999999999999999988774 699999999
Q ss_pred HHHHHHhCCCCHHHHH
Q 009385 493 FLEAISADPTNSYYAA 508 (536)
Q Consensus 493 feKALeLDPdNpeal~ 508 (536)
|++|++++|+++....
T Consensus 112 ~~~al~~~p~~~~~~~ 127 (148)
T 2vgx_A 112 LFLAQELIANXPEFXE 127 (148)
T ss_dssp HHHHHHHHTTCGGGHH
T ss_pred HHHHHHHCcCCCcchH
Confidence 9999999999886543
No 16
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.55 E-value=5.8e-14 Score=126.34 Aligned_cols=106 Identities=9% Similarity=-0.015 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 009385 416 YFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLE 495 (536)
Q Consensus 416 yeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feK 495 (536)
+-.+-..|+++++++|+++.+++++|..++ ..|++++|+.+|+++++++|+|+.+|+++|.++... |++++|+.+|++
T Consensus 18 ~~~~~~~l~~al~l~p~~~~~~~~lg~~~~-~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~-g~~~~Ai~~~~~ 95 (151)
T 3gyz_A 18 AINSGATLKDINAIPDDMMDDIYSYAYDFY-NKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIK-EQFQQAADLYAV 95 (151)
T ss_dssp HHHTSCCTGGGCCSCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHH
T ss_pred HHHCCCCHHHHhCCCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-ccHHHHHHHHHH
Confidence 333445678999999999999999999888 699999999999999999999999999999988875 699999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 496 AISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 496 ALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
|++++|+++.+++++|.+|..+|+.+++
T Consensus 96 al~l~P~~~~~~~~lg~~~~~lg~~~eA 123 (151)
T 3gyz_A 96 AFALGKNDYTPVFHTGQCQLRLKAPLKA 123 (151)
T ss_dssp HHHHSSSCCHHHHHHHHHHHHTTCHHHH
T ss_pred HHhhCCCCcHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999999999999997654
No 17
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.54 E-value=2.3e-13 Score=108.60 Aligned_cols=103 Identities=28% Similarity=0.441 Sum_probs=97.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|++++..+|++..++.++|.++. ..|++++|+.+|+++++.+|+++.++..+|.++... |++++|+.+|
T Consensus 23 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~~~A~~~~ 100 (125)
T 1na0_A 23 GDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQ-GDYDEAIEYY 100 (125)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh-cCHHHHHHHH
Confidence 89999999999999999999999999999887 689999999999999999999999999999988874 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcC
Q 009385 494 LEAISADPTNSYYAANYANFLWNTG 518 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elG 518 (536)
+++++++|+++.++.+++.++...|
T Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 101 QKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 9999999999999999999988765
No 18
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.54 E-value=1.9e-14 Score=119.89 Aligned_cols=107 Identities=13% Similarity=0.129 Sum_probs=94.2
Q ss_pred CCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHH
Q 009385 414 ADYFRTELLYQTGLAQ---EPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAE 490 (536)
Q Consensus 414 gdyeeAee~YqKALeL---dPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAe 490 (536)
|++++|+.+|++|+++ +|+++.+++++|.+++ ..|++++|+.+|+++++++|+++.+++++|.++... |++++|+
T Consensus 4 g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~-g~~~~A~ 81 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFR-TLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNL-GRYEQGV 81 (117)
T ss_dssp ---CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-TCHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHc-CCHHHHH
Confidence 7899999999999999 6999999999999888 699999999999999999999999999999998875 6999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009385 491 ETFLEAISADPTNSYYAANYANFLWNTGGEDT 522 (536)
Q Consensus 491 e~feKALeLDPdNpeal~NyA~~L~elGr~E~ 522 (536)
.+|+++++++|+++.+......+....+..++
T Consensus 82 ~~~~~al~~~p~~~~~~~~~~ai~~~~~~l~~ 113 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQSYKQAILFYADKLDE 113 (117)
T ss_dssp HHHHHHHHHHCCCHHHHHTHHHHHHHTTCTTC
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987666666666665554
No 19
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.54 E-value=1.2e-13 Score=120.92 Aligned_cols=109 Identities=13% Similarity=0.015 Sum_probs=94.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+..+++++..+|+++.++.++|.++. ..++++.|...++++++++|++..++..+|.++... |++++|+++|
T Consensus 53 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~-g~~~~A~~~~ 130 (184)
T 3vtx_A 53 GLPNDAIESLKKFVVLDTTSAEAYYILGSANF-MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSM-GEHDKAIEAY 130 (184)
T ss_dssp TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHh-CCchhHHHHH
Confidence 78888888888888888888888888887766 578888899999999999999999999999888764 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCcccc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~cl 524 (536)
+++++++|+++.++.++|.++..+|+.+++.
T Consensus 131 ~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~ 161 (184)
T 3vtx_A 131 EKTISIKPGFIRAYQSIGLAYEGKGLRDEAV 161 (184)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHhcchhhhHHHHHHHHHHHCCCHHHHH
Confidence 9999999999999999999999999887654
No 20
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.53 E-value=2e-14 Score=123.51 Aligned_cols=97 Identities=16% Similarity=0.064 Sum_probs=88.6
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 009385 425 TGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNS 504 (536)
Q Consensus 425 KALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNp 504 (536)
++..+||+.++++.++|..++ ..|++++|+++|++||+++|+++.++.++|.++... |++++|+..|++|++++|+++
T Consensus 4 r~a~inP~~a~~~~~~G~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~~~p~~~ 81 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYF-KKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKL-MEFQRALDDCDTCIRLDSKFI 81 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhh-ccHHHHHHHHHHHHHhhhhhh
Confidence 455689999999999999988 699999999999999999999999999999998875 699999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCccc
Q 009385 505 YYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 505 eal~NyA~~L~elGr~E~c 523 (536)
.++.++|.++..+|+.+++
T Consensus 82 ~a~~~lg~~~~~~~~~~~A 100 (126)
T 4gco_A 82 KGYIRKAACLVAMREWSKA 100 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHCCCHHHH
Confidence 9999999999999987543
No 21
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.53 E-value=2.6e-14 Score=125.18 Aligned_cols=109 Identities=12% Similarity=0.112 Sum_probs=95.6
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCH--HHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDL--WAAE 490 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~--eEAe 490 (536)
.+++++|+..|+++++.+|+++.+++++|.++. ..|++++|+.+|+++++++|+++.++.++|.+++...|++ ++|+
T Consensus 23 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~ 101 (177)
T 2e2e_A 23 QQNPEAQLQALQDKIRANPQNSEQWALLGEYYL-WQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTR 101 (177)
T ss_dssp ----CCCCHHHHHHHHHCCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHH
Confidence 478999999999999999999999999998887 6899999999999999999999999999999844445788 9999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009385 491 ETFLEAISADPTNSYYAANYANFLWNTGGEDT 522 (536)
Q Consensus 491 e~feKALeLDPdNpeal~NyA~~L~elGr~E~ 522 (536)
.+|+++++++|+++.++.++|.++...|+.++
T Consensus 102 ~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~ 133 (177)
T 2e2e_A 102 AMIDKALALDSNEITALMLLASDAFMQANYAQ 133 (177)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHcccHHH
Confidence 99999999999999999999999999998653
No 22
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.53 E-value=4.4e-14 Score=144.87 Aligned_cols=109 Identities=10% Similarity=0.014 Sum_probs=103.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHD-YDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD-~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
+++++|+.+|++||+++|++..+|+++|.++. ..|+ +++|+.+|++||+++|+++.+|+++|.++... |++++|+.+
T Consensus 111 g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~-~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~-g~~~eAl~~ 188 (382)
T 2h6f_A 111 ERSERAFKLTRDAIELNAANYTVWHFRRVLLK-SLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWL-RDPSQELEF 188 (382)
T ss_dssp CCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-TCCTTHHHH
T ss_pred CChHHHHHHHHHHHHhCccCHHHHHHHHHHHH-HcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-cCHHHHHHH
Confidence 78999999999999999999999999999888 5886 99999999999999999999999999988875 699999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCcccc
Q 009385 493 FLEAISADPTNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 493 feKALeLDPdNpeal~NyA~~L~elGr~E~cl 524 (536)
|++||+++|+|+.+++++|.++..+|+.++++
T Consensus 189 ~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl 220 (382)
T 2h6f_A 189 IADILNQDAKNYHAWQHRQWVIQEFKLWDNEL 220 (382)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHH
T ss_pred HHHHHHhCccCHHHHHHHHHHHHHcCChHHHH
Confidence 99999999999999999999999999987654
No 23
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.53 E-value=2.9e-13 Score=107.29 Aligned_cols=99 Identities=18% Similarity=0.234 Sum_probs=93.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|++++..+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++... |++++|+.+|
T Consensus 18 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~~ 95 (118)
T 1elw_A 18 GNIDDALQCYSEAIKLDPHNHVLYSNRSAAYA-KKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFL-NRFEEAKRTY 95 (118)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH-hhHHHHHHHH
Confidence 89999999999999999999999999999887 689999999999999999999999999999988764 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHH
Q 009385 494 LEAISADPTNSYYAANYANFL 514 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L 514 (536)
+++++++|+++.++..++.+.
T Consensus 96 ~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 96 EEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHhh
Confidence 999999999999999888765
No 24
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.52 E-value=8.2e-14 Score=119.74 Aligned_cols=98 Identities=13% Similarity=0.057 Sum_probs=89.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|++++|+.+|++++.++|+++.+|+++|.++. ..|++++|+.+|+++++++|+++.+++++|.++... |++++|+.+|
T Consensus 32 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-g~~~~A~~~~ 109 (142)
T 2xcb_A 32 GKWDDAQKIFQALCMLDHYDARYFLGLGACRQ-SLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQL-GDLDGAESGF 109 (142)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc-CCHHHHHHHH
Confidence 89999999999999999999999999999888 699999999999999999999999999999988875 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHH
Q 009385 494 LEAISADPTNSYYAANYANF 513 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~ 513 (536)
+++++++|+++.+......+
T Consensus 110 ~~al~~~p~~~~~~~~~~~~ 129 (142)
T 2xcb_A 110 YSARALAAAQPAHEALAARA 129 (142)
T ss_dssp HHHHHHHHTCGGGHHHHHHH
T ss_pred HHHHHhCCCCcchHHHHHHH
Confidence 99999999998765444333
No 25
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.52 E-value=1.3e-13 Score=125.18 Aligned_cols=108 Identities=19% Similarity=0.160 Sum_probs=101.2
Q ss_pred CCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEP-NDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 414 gdyeeAee~YqKALeLdP-dn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
+++++|+.+|+++++++| .+..+++++|.++. ..|++++|+++|+++++++|+++.++.++|.++... |++++|+.+
T Consensus 21 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~-~~~~~A~~~ 98 (228)
T 4i17_A 21 KNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCAD-NIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDM-KNNQEYIAT 98 (228)
T ss_dssp TCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHT-TCHHHHHHH
T ss_pred cCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH-HhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHc-ccHHHHHHH
Confidence 899999999999999999 99999999998887 699999999999999999999999999999998875 699999999
Q ss_pred HHHHHHhCCCCH-------HHHHHHHHHHHHcCCCccc
Q 009385 493 FLEAISADPTNS-------YYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 493 feKALeLDPdNp-------eal~NyA~~L~elGr~E~c 523 (536)
|+++++++|+++ .++.++|.++...|+.+++
T Consensus 99 ~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A 136 (228)
T 4i17_A 99 LTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKA 136 (228)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHH
Confidence 999999999999 6689999999999987654
No 26
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.52 E-value=1e-13 Score=121.92 Aligned_cols=104 Identities=13% Similarity=0.019 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 009385 418 RTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAI 497 (536)
Q Consensus 418 eAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKAL 497 (536)
.+...|++++.++|++..+++++|.+++ ..|++++|+.+|++++.++|+++.+++++|.++... |++++|+.+|++|+
T Consensus 5 ~~~~~~~~al~~~p~~~~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-g~~~~A~~~~~~al 82 (148)
T 2vgx_A 5 SGGGTIAMLNEISSDTLEQLYSLAFNQY-QSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAM-GQYDLAIHSYSYGA 82 (148)
T ss_dssp -CCCSHHHHTTCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH
T ss_pred chhhhHHHHHcCCHhhHHHHHHHHHHHH-HcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHH-hhHHHHHHHHHHHH
Confidence 3445789999999999999999999888 699999999999999999999999999999988764 69999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 498 SADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 498 eLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+++|+++.+++++|.++..+|+.+++
T Consensus 83 ~l~p~~~~~~~~lg~~~~~~g~~~~A 108 (148)
T 2vgx_A 83 VMDIXEPRFPFHAAECLLQXGELAEA 108 (148)
T ss_dssp HHSTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred hcCCCCchHHHHHHHHHHHcCCHHHH
Confidence 99999999999999999999987543
No 27
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.51 E-value=6.4e-14 Score=130.27 Aligned_cols=100 Identities=15% Similarity=0.169 Sum_probs=89.3
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009385 412 DYADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHD----------YDRAEEYFKRAIAVEPPDAESFSKYASFLWR 481 (536)
Q Consensus 412 d~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD----------~deAEe~FeKALeLDPddaeAL~nLG~~L~e 481 (536)
..+.|++|++.|++|++++|+++++|+++|.++. ..++ +++|+.+|++||+++|+++++|+++|.+|..
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~-~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLL-ELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 3478999999999999999999999999999877 4555 5699999999999999999999999999987
Q ss_pred hc----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009385 482 VR----------NDLWAAEETFLEAISADPTNSYYAANYAN 512 (536)
Q Consensus 482 ~~----------GD~eEAee~feKALeLDPdNpeal~NyA~ 512 (536)
.+ |++++|+++|++|++++|++..+..++..
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~ 133 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEM 133 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 53 58999999999999999999988766554
No 28
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.51 E-value=2.5e-14 Score=123.00 Aligned_cols=101 Identities=14% Similarity=0.042 Sum_probs=91.8
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 009385 421 LLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISAD 500 (536)
Q Consensus 421 e~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLD 500 (536)
..|++++.++|++..+++++|..++ ..|++++|+.+|++++.++|+++.++.++|.++... |++++|+.+|++|++++
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQY-QAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSL-GLYEQALQSYSYGALMD 82 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHH-hhHHHHHHHHHHHHhcC
Confidence 5788999999999999999999888 699999999999999999999999999999988764 69999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCccc
Q 009385 501 PTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 501 PdNpeal~NyA~~L~elGr~E~c 523 (536)
|+++.+++++|.++..+|+.+++
T Consensus 83 p~~~~~~~~lg~~~~~~g~~~~A 105 (142)
T 2xcb_A 83 INEPRFPFHAAECHLQLGDLDGA 105 (142)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999999997644
No 29
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.51 E-value=1.7e-13 Score=116.06 Aligned_cols=108 Identities=14% Similarity=0.193 Sum_probs=97.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++... |++++|+.+|
T Consensus 27 ~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~~ 104 (166)
T 1a17_A 27 KDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMAL-GKFRAALRDY 104 (166)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHh-ccHHHHHHHH
Confidence 89999999999999999999999999999887 699999999999999999999999999999988764 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHH--HHHcCCCccc
Q 009385 494 LEAISADPTNSYYAANYANF--LWNTGGEDTC 523 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~--L~elGr~E~c 523 (536)
+++++++|+++.++..++.+ +...|+.+++
T Consensus 105 ~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A 136 (166)
T 1a17_A 105 ETVVKVKPHDKDAKMKYQECNKIVKQKAFERA 136 (166)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988555554 7677765543
No 30
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.51 E-value=7.6e-14 Score=121.53 Aligned_cols=103 Identities=19% Similarity=0.152 Sum_probs=93.8
Q ss_pred CCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQ------------------EPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKY 475 (536)
Q Consensus 414 gdyeeAee~YqKALeL------------------dPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nL 475 (536)
|+|++|+.+|.+||.+ +|.+..+++|+|.++. ..|++++|+.+|++||+++|+++.+++++
T Consensus 25 ~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 103 (162)
T 3rkv_A 25 KDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYL-NIGDLHEAEETSSEVLKREETNEKALFRR 103 (162)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHhcCCcchHHHHHH
Confidence 8999999999999999 7888899999999887 69999999999999999999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHcC
Q 009385 476 ASFLWRVRNDLWAAEETFLEAISADPTNS-YYAANYANFLWNTG 518 (536)
Q Consensus 476 G~~L~e~~GD~eEAee~feKALeLDPdNp-eal~NyA~~L~elG 518 (536)
|.++... |++++|+.+|++|++++|+++ .+...++.+....+
T Consensus 104 g~~~~~~-g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~ 146 (162)
T 3rkv_A 104 AKARIAA-WKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRA 146 (162)
T ss_dssp HHHHHHT-TCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-hcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 9998875 699999999999999999999 66667777665544
No 31
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.50 E-value=1.1e-13 Score=117.89 Aligned_cols=90 Identities=13% Similarity=0.052 Sum_probs=79.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|++++|+..|+++++++|+++.+|+++|.++. ..|++++|+.+|++|++++|+++.++.++|.++... |++++|+.+|
T Consensus 31 g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~-g~~~~A~~~~ 108 (121)
T 1hxi_A 31 ANLAEAALAFEAVCQKEPEREEAWRSLGLTQA-ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE-HNANAALASL 108 (121)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHHHHH
Confidence 89999999999999999999999999999887 699999999999999999999999999999988875 5999999999
Q ss_pred HHHHHhCCCCHH
Q 009385 494 LEAISADPTNSY 505 (536)
Q Consensus 494 eKALeLDPdNpe 505 (536)
+++++++|+++.
T Consensus 109 ~~al~~~P~~~~ 120 (121)
T 1hxi_A 109 RAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHC-------
T ss_pred HHHHHhCcCCCC
Confidence 999999998764
No 32
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.50 E-value=3.5e-13 Score=118.03 Aligned_cols=90 Identities=11% Similarity=0.022 Sum_probs=61.5
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
++++.|...+.+++.++|++..++..+|.++. ..|++++|+++|+++++++|+++.++.++|.++... |++++|+.+|
T Consensus 87 ~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~-g~~~~A~~~~ 164 (184)
T 3vtx_A 87 DEKQAAIDALQRAIALNTVYADAYYKLGLVYD-SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGK-GLRDEAVKYF 164 (184)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHC-CCHHHHHHHH
Confidence 56667777777777777777777777776655 467777777777777777777777777777666553 5677777777
Q ss_pred HHHHHhCCCCHH
Q 009385 494 LEAISADPTNSY 505 (536)
Q Consensus 494 eKALeLDPdNpe 505 (536)
++|++++|+++.
T Consensus 165 ~~al~~~p~~a~ 176 (184)
T 3vtx_A 165 KKALEKEEKKAK 176 (184)
T ss_dssp HHHHHTTHHHHH
T ss_pred HHHHhCCccCHH
Confidence 777777766543
No 33
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.50 E-value=5.2e-13 Score=106.90 Aligned_cols=108 Identities=26% Similarity=0.416 Sum_probs=101.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|+++++.+|++..++.++|.++. ..|++++|+.+|++++..+|+++.++..+|.++.. .|++++|+.+|
T Consensus 15 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 92 (136)
T 2fo7_A 15 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYDEAIEYY 92 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCcchhHHHHHHHHHH-HhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH-hcCHHHHHHHH
Confidence 79999999999999999999999999998887 58999999999999999999999999999998876 47999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+++++.+|+++.++..+|.++...|+.+++
T Consensus 93 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 122 (136)
T 2fo7_A 93 QKALELDPRSAEAWYNLGNAYYKQGDYDEA 122 (136)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHhCCCChHHHHHHHHHHHHHccHHHH
Confidence 999999999999999999999999987654
No 34
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=4.7e-13 Score=111.24 Aligned_cols=101 Identities=22% Similarity=0.248 Sum_probs=94.2
Q ss_pred CCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPND---PLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAE 490 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn---~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAe 490 (536)
+++++|+.+|+++++++|++ ..++.++|.++. ..|++++|+.+|+++++++|+++.+++++|.++... |++++|+
T Consensus 42 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~A~ 119 (148)
T 2dba_A 42 GDYGGALAAYTQALGLDATPQDQAVLHRNRAACHL-KLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKL-GRLDQAV 119 (148)
T ss_dssp TCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH-TCHHHHH
T ss_pred CCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHc-CCHHHHH
Confidence 79999999999999999998 899999999887 699999999999999999999999999999988875 6999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009385 491 ETFLEAISADPTNSYYAANYANFLWN 516 (536)
Q Consensus 491 e~feKALeLDPdNpeal~NyA~~L~e 516 (536)
.+|+++++++|+++.++..++.+...
T Consensus 120 ~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 120 LDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 99999999999999999888877543
No 35
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.49 E-value=2.9e-13 Score=121.58 Aligned_cols=106 Identities=15% Similarity=0.112 Sum_probs=99.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDP----------------LLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYAS 477 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~----------------eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~ 477 (536)
++|++|+.+|++|+++.|+++ .++.++|.++. ..|++++|+.+|+++++++|+++.+++++|.
T Consensus 52 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 130 (198)
T 2fbn_A 52 NEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYN-KNKDYPKAIDHASKVLKIDKNNVKALYKLGV 130 (198)
T ss_dssp TCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 899999999999999999998 89999999887 6999999999999999999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009385 478 FLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGED 521 (536)
Q Consensus 478 ~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E 521 (536)
++... |++++|+.+|++|++++|+++.++.+++.++...|+.+
T Consensus 131 ~~~~~-~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~ 173 (198)
T 2fbn_A 131 ANMYF-GFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEAR 173 (198)
T ss_dssp HHHHH-TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHc-ccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHH
Confidence 98875 69999999999999999999999999999998887553
No 36
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.48 E-value=6.7e-13 Score=112.57 Aligned_cols=109 Identities=15% Similarity=0.108 Sum_probs=102.7
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
.+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++.+|+++.++..+|.++... |++++|+.+
T Consensus 55 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~ 132 (186)
T 3as5_A 55 TGAVDRGTELLERSLADAPDNVKVATVLGLTYV-QVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNL-GRFDEAIDS 132 (186)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHc-CcHHHHHHH
Confidence 389999999999999999999999999999887 689999999999999999999999999999988774 699999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 493 FLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 493 feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
|+++++.+|+++.++.++|.++...|+.+++
T Consensus 133 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 163 (186)
T 3as5_A 133 FKIALGLRPNEGKVHRAIAFSYEQMGRHEEA 163 (186)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhcCccchHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999999999999999987654
No 37
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.48 E-value=1.9e-13 Score=135.64 Aligned_cols=106 Identities=16% Similarity=0.129 Sum_probs=100.5
Q ss_pred CCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPND---------------PLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASF 478 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn---------------~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~ 478 (536)
+++++|+.+|++|++++|++ ..+++|+|.++. ..|++++|+.+|++||+++|+++.+++++|.+
T Consensus 161 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 239 (336)
T 1p5q_A 161 GKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHL-KLQAFSAAIESCNKALELDSNNEKGLSRRGEA 239 (336)
T ss_dssp TCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 89999999999999999999 699999999887 69999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009385 479 LWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGED 521 (536)
Q Consensus 479 L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E 521 (536)
+... |++++|+.+|++|++++|+++.++.+++.++..+|+.+
T Consensus 240 ~~~~-g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~ 281 (336)
T 1p5q_A 240 HLAV-NDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQL 281 (336)
T ss_dssp HHHT-TCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHC-CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 8875 69999999999999999999999999999999988754
No 38
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.47 E-value=5e-13 Score=114.42 Aligned_cols=95 Identities=15% Similarity=0.274 Sum_probs=84.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHHHhcCCH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDA-------ESFSKYASFLWRVRNDL 486 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdda-------eAL~nLG~~L~e~~GD~ 486 (536)
|+|++|+.+|++||+++|+++.+|.|+|.++. ..|++++|+++|++||+++|++. .++.++|.++.. .|++
T Consensus 22 ~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~-~~~~ 99 (127)
T 4gcn_A 22 KDFEKAHVHYDKAIELDPSNITFYNNKAAVYF-EEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQK-QNDL 99 (127)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TTCH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHH-HhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHH-cCCH
Confidence 89999999999999999999999999999888 69999999999999999999874 588899988776 4699
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHH
Q 009385 487 WAAEETFLEAISADPTNSYYAANYA 511 (536)
Q Consensus 487 eEAee~feKALeLDPdNpeal~NyA 511 (536)
++|+++|++|++.+|+ ++....+.
T Consensus 100 ~~A~~~~~kal~~~~~-~~~~~~l~ 123 (127)
T 4gcn_A 100 SLAVQWFHRSLSEFRD-PELVKKVK 123 (127)
T ss_dssp HHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred HHHHHHHHHHHhhCcC-HHHHHHHH
Confidence 9999999999999885 55544443
No 39
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.47 E-value=2.4e-13 Score=123.35 Aligned_cols=105 Identities=11% Similarity=0.119 Sum_probs=99.5
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHHHhcCCH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDA-------ESFSKYASFLWRVRNDL 486 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdda-------eAL~nLG~~L~e~~GD~ 486 (536)
+++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++ .++.++|.++... |++
T Consensus 56 ~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~-~~~ 133 (228)
T 4i17_A 56 KKYKEAADYFDIAIKKNYNLANAYIGKSAAYR-DMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQA-GNI 133 (228)
T ss_dssp TCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHT-TCH
T ss_pred hcHHHHHHHHHHHHHhCcchHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHh-ccH
Confidence 89999999999999999999999999999888 69999999999999999999999 6799999988764 699
Q ss_pred HHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCC
Q 009385 487 WAAEETFLEAISADPT--NSYYAANYANFLWNTGGE 520 (536)
Q Consensus 487 eEAee~feKALeLDPd--Npeal~NyA~~L~elGr~ 520 (536)
++|+.+|++|++++|+ ++.++.++|.++...|+.
T Consensus 134 ~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 134 EKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999998875
No 40
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.46 E-value=7.8e-13 Score=109.87 Aligned_cols=101 Identities=11% Similarity=0.058 Sum_probs=92.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|++++.++|+++.+++++|.++. ..|++++|+.+|+++++++|+++.+++++|.++... |++++|+.+|
T Consensus 23 ~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~-~~~~~A~~~~ 100 (137)
T 3q49_B 23 RKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEM-ESYDEAIANL 100 (137)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH-hhHHHHHHHH
Confidence 89999999999999999999999999999888 699999999999999999999999999999988875 6999999999
Q ss_pred HHHHHhCCC-----CHHHHHHHHHHHHH
Q 009385 494 LEAISADPT-----NSYYAANYANFLWN 516 (536)
Q Consensus 494 eKALeLDPd-----Npeal~NyA~~L~e 516 (536)
++|++++|+ +..+...+..+...
T Consensus 101 ~~a~~~~p~~~~~~~~~~~~~l~~~~~~ 128 (137)
T 3q49_B 101 QRAYSLAKEQRLNFGDDIPSALRIAKKK 128 (137)
T ss_dssp HHHHHHHHHTTCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHChhHHHHHHHHHHHHHHHHHHH
Confidence 999999998 67776666655443
No 41
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.45 E-value=5.5e-13 Score=128.35 Aligned_cols=109 Identities=19% Similarity=0.208 Sum_probs=103.0
Q ss_pred cCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPN--DPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAE 490 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPd--n~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAe 490 (536)
.|++++|+.+|+++++++|+ ++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++... |++++|+
T Consensus 190 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~-g~~~~A~ 267 (365)
T 4eqf_A 190 SSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFH-LSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANG-DRSEEAV 267 (365)
T ss_dssp CHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHH
Confidence 38999999999999999999 9999999999887 689999999999999999999999999999988874 6999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 491 ETFLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 491 e~feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
.+|+++++++|+++.++.++|.++..+|+.+++
T Consensus 268 ~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 300 (365)
T 4eqf_A 268 EAYTRALEIQPGFIRSRYNLGISCINLGAYREA 300 (365)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHH
T ss_pred HHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHH
Confidence 999999999999999999999999999997654
No 42
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.44 E-value=3.2e-12 Score=105.12 Aligned_cols=103 Identities=16% Similarity=0.128 Sum_probs=92.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHhcCCHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDP---LLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD---AESFSKYASFLWRVRNDLW 487 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~---eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd---aeAL~nLG~~L~e~~GD~e 487 (536)
+++++|+..|+++++.+|+++ .+++++|.+++ ..|++++|+.+|+++++.+|++ +.+++++|.++... |+++
T Consensus 16 ~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~-g~~~ 93 (129)
T 2xev_A 16 GKYDDASQLFLSFLELYPNGVYTPNALYWLGESYY-ATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGE-GKNT 93 (129)
T ss_dssp TCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHT-TCHH
T ss_pred CCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHc-CCHH
Confidence 899999999999999999999 89999999888 6999999999999999999999 99999999988874 6999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 009385 488 AAEETFLEAISADPTNSYYAANYANFLWNTG 518 (536)
Q Consensus 488 EAee~feKALeLDPdNpeal~NyA~~L~elG 518 (536)
+|+.+|+++++..|+++.+......+-...+
T Consensus 94 ~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~ 124 (129)
T 2xev_A 94 EAQQTLQQVATQYPGSDAARVAQERLQSIRL 124 (129)
T ss_dssp HHHHHHHHHHHHSTTSHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHCCCChHHHHHHHHHHHHHh
Confidence 9999999999999999987666655544333
No 43
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.43 E-value=1e-12 Score=137.50 Aligned_cols=114 Identities=13% Similarity=0.169 Sum_probs=102.7
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
.+++++|+.+|++|++++|+++.+++++|.++. ..|++++|+++|++|++++|+++.+++++|.++... |++++|+++
T Consensus 19 ~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~-g~~~eA~~~ 96 (477)
T 1wao_1 19 AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMAL-GKFRAALRD 96 (477)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHH-TCHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHHHH
Confidence 489999999999999999999999999999888 699999999999999999999999999999988875 699999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHH--HHHcCCCccccCCCC
Q 009385 493 FLEAISADPTNSYYAANYANF--LWNTGGEDTCFPLSS 528 (536)
Q Consensus 493 feKALeLDPdNpeal~NyA~~--L~elGr~E~clpl~~ 528 (536)
|++|++++|+++.++.+++.+ +...|+.+++....+
T Consensus 97 ~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 97 YETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999988 888888777766655
No 44
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.43 E-value=8.9e-13 Score=111.79 Aligned_cols=108 Identities=17% Similarity=0.130 Sum_probs=102.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++.+|+++.++..+|.++... |++++|+++|
T Consensus 22 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~~ 99 (186)
T 3as5_A 22 GRYSQAVMLLEQVYDADAFDVDVALHLGIAYV-KTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQV-QKYDLAVPLL 99 (186)
T ss_dssp TCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-TCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCccChHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh-cCHHHHHHHH
Confidence 89999999999999999999999999999887 699999999999999999999999999999988775 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+++++++|+++.++.++|.++...|+.+++
T Consensus 100 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A 129 (186)
T 3as5_A 100 IKVAEANPINFNVRFRLGVALDNLGRFDEA 129 (186)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhcCcHhHHHHHHHHHHHHHcCcHHHH
Confidence 999999999999999999999999987654
No 45
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.43 E-value=2.4e-12 Score=115.22 Aligned_cols=110 Identities=15% Similarity=0.114 Sum_probs=100.2
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
.+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++..+|.++... |++++|+.+
T Consensus 104 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~ 181 (243)
T 2q7f_A 104 KEMYKEAKDMFEKALRAGMENGDLFYMLGTVLV-KLEQPKLALPYLQRAVELNENDTEARFQFGMCLANE-GMLDEALSQ 181 (243)
T ss_dssp TTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH-HTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-TCCHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHc-CCHHHHHHH
Confidence 389999999999999999999999999998877 689999999999999999999999999999988775 699999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCcccc
Q 009385 493 FLEAISADPTNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 493 feKALeLDPdNpeal~NyA~~L~elGr~E~cl 524 (536)
|+++++.+|+++.++.++|.++...|+.+++.
T Consensus 182 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 213 (243)
T 2q7f_A 182 FAAVTEQDPGHADAFYNAGVTYAYKENREKAL 213 (243)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHccCHHHHH
Confidence 99999999999999999999999999876543
No 46
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.43 E-value=2.5e-12 Score=115.09 Aligned_cols=109 Identities=15% Similarity=0.196 Sum_probs=103.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|+++++.+|++..++.++|.++. ..|++++|+++|+++++.+|+++.++..+|.++... |++++|+.+|
T Consensus 71 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~~ 148 (243)
T 2q7f_A 71 NELERALAFYDKALELDSSAATAYYGAGNVYV-VKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKL-EQPKLALPYL 148 (243)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHT-SCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcchHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh-ccHHHHHHHH
Confidence 89999999999999999999999999999887 699999999999999999999999999999988764 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCcccc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~cl 524 (536)
+++++++|+++.++.++|.++...|+.+++.
T Consensus 149 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 179 (243)
T 2q7f_A 149 QRAVELNENDTEARFQFGMCLANEGMLDEAL 179 (243)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHTCCHHHH
T ss_pred HHHHHhCCccHHHHHHHHHHHHHcCCHHHHH
Confidence 9999999999999999999999999986543
No 47
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.42 E-value=2.9e-12 Score=116.28 Aligned_cols=109 Identities=18% Similarity=0.263 Sum_probs=100.4
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHhcCCHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIA--VEPPDAESFSKYASFLWRVRNDLWAAE 490 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALe--LDPddaeAL~nLG~~L~e~~GD~eEAe 490 (536)
.+++++|+.+|+++++.+|++..++.++|.++. ..|++++|+++|+++++ .+|.++.++..+|.++... |++++|+
T Consensus 84 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-g~~~~A~ 161 (252)
T 2ho1_A 84 EMEPKLADEEYRKALASDSRNARVLNNYGGFLY-EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQM-KKPAQAK 161 (252)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHT-TCHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHc-CCHHHHH
Confidence 389999999999999999999999999998887 68999999999999999 8899999999999988764 6999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 491 ETFLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 491 e~feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
.+|+++++++|+++.++..+|.++...|+.+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 194 (252)
T 2ho1_A 162 EYFEKSLRLNRNQPSVALEMADLLYKEREYVPA 194 (252)
T ss_dssp HHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999999999999999987544
No 48
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.42 E-value=1.4e-12 Score=117.12 Aligned_cols=108 Identities=15% Similarity=0.063 Sum_probs=96.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+..|++++..+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++... |++++|+.+|
T Consensus 119 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~ 196 (258)
T 3uq3_A 119 RNAEKELKKAEAEAYVNPEKAEEARLEGKEYF-TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKL-MSFPEAIADC 196 (258)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCcchHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHh-CCHHHHHHHH
Confidence 55666666666666689999999999999887 689999999999999999999999999999988764 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+++++++|+++.++.++|.++...|+.+++
T Consensus 197 ~~al~~~~~~~~~~~~l~~~~~~~g~~~~A 226 (258)
T 3uq3_A 197 NKAIEKDPNFVRAYIRKATAQIAVKEYASA 226 (258)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhhHHHH
Confidence 999999999999999999999999987544
No 49
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.42 E-value=1.9e-12 Score=104.33 Aligned_cols=103 Identities=13% Similarity=0.190 Sum_probs=94.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHhcCCH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD-------AESFSKYASFLWRVRNDL 486 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd-------aeAL~nLG~~L~e~~GD~ 486 (536)
+++++|+.+|++++..+|+++.++.++|.++. ..|++++|+.+|++++.++|++ +.++.++|.++... |++
T Consensus 18 ~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~ 95 (131)
T 1elr_A 18 KDFDTALKHYDKAKELDPTNMTYITNQAAVYF-EKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKE-EKY 95 (131)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHT-TCH
T ss_pred cCHHHHHHHHHHHHhcCCccHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHh-ccH
Confidence 89999999999999999999999999999887 6899999999999999999988 99999999988874 699
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009385 487 WAAEETFLEAISADPTNSYYAANYANFLWNTGG 519 (536)
Q Consensus 487 eEAee~feKALeLDPdNpeal~NyA~~L~elGr 519 (536)
++|+.+|+++++++| ++.....++.++...++
T Consensus 96 ~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 96 KDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 999999999999999 68888888888766554
No 50
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.41 E-value=5.2e-13 Score=121.70 Aligned_cols=107 Identities=16% Similarity=0.143 Sum_probs=85.4
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
.|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+++|+++++++|+++.++.++|.++... |++++|+.+
T Consensus 56 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~-g~~~~A~~~ 133 (275)
T 1xnf_A 56 LGLRALARNDFSQALAIRPDMPEVFNYLGIYLT-QAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYG-GRDKLAQDD 133 (275)
T ss_dssp TTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHT-TCHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHh-ccHHHHHHH
Confidence 378888888888888888888888888888777 588888888888888888888888888888877764 688888888
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009385 493 FLEAISADPTNSYYAANYANFLWNTGGEDT 522 (536)
Q Consensus 493 feKALeLDPdNpeal~NyA~~L~elGr~E~ 522 (536)
|+++++++|+++.....++.. ...|+.++
T Consensus 134 ~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~ 162 (275)
T 1xnf_A 134 LLAFYQDDPNDPFRSLWLYLA-EQKLDEKQ 162 (275)
T ss_dssp HHHHHHHCTTCHHHHHHHHHH-HHHHCHHH
T ss_pred HHHHHHhCCCChHHHHHHHHH-HHhcCHHH
Confidence 888888888888665555443 44566543
No 51
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.41 E-value=2.3e-12 Score=122.75 Aligned_cols=110 Identities=20% Similarity=0.197 Sum_probs=103.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++... |++++|+.+|
T Consensus 231 g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~ 308 (368)
T 1fch_A 231 GEYDKAVDCFTAALSVRPNDYLLWNKLGATLA-NGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINL-GAHREAVEHF 308 (368)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-TCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC-CCHHHHHHHH
Confidence 89999999999999999999999999999887 699999999999999999999999999999988875 6999999999
Q ss_pred HHHHHhCCCC-----------HHHHHHHHHHHHHcCCCccccC
Q 009385 494 LEAISADPTN-----------SYYAANYANFLWNTGGEDTCFP 525 (536)
Q Consensus 494 eKALeLDPdN-----------peal~NyA~~L~elGr~E~clp 525 (536)
+++++++|++ +.++.++|.++..+|+.+.+..
T Consensus 309 ~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 351 (368)
T 1fch_A 309 LEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGA 351 (368)
T ss_dssp HHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHH
T ss_pred HHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHH
Confidence 9999999998 8999999999999999876543
No 52
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.39 E-value=2.1e-12 Score=134.79 Aligned_cols=107 Identities=20% Similarity=0.191 Sum_probs=101.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|++|++++|+++.++.++|.++. ..|++++|+++|+++++++|+++.+++++|.++... |++++|+++|
T Consensus 37 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~-g~~~~A~~~~ 114 (568)
T 2vsy_A 37 GDTTAGEMAVQRGLALHPGHPEAVARLGRVRW-TQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDA-GQAEAAAAAY 114 (568)
T ss_dssp TCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc-CCHHHHHHHH
Confidence 89999999999999999999999999999888 699999999999999999999999999999988774 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHc---CCCcc
Q 009385 494 LEAISADPTNSYYAANYANFLWNT---GGEDT 522 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~el---Gr~E~ 522 (536)
++|++++|+++.++.++|.++..+ |+.++
T Consensus 115 ~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~ 146 (568)
T 2vsy_A 115 TRAHQLLPEEPYITAQLLNWRRRLCDWRALDV 146 (568)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHhhccccHHH
Confidence 999999999999999999999999 87653
No 53
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.39 E-value=2.1e-12 Score=125.73 Aligned_cols=107 Identities=19% Similarity=0.197 Sum_probs=82.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+++|+++++++|+++.++.++|.++.. .|++++|+.+|
T Consensus 251 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~ 328 (388)
T 1w3b_A 251 GLIDLAIDTYRRAIELQPHFPDAYCNLANALK-EKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE-QGNIEEAVRLY 328 (388)
T ss_dssp TCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 67777888888888888887877777777766 57788888888888888888888887777776654 45788888888
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDT 522 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~ 522 (536)
+++++++|+++.++.++|.++...|+.++
T Consensus 329 ~~al~~~p~~~~~~~~l~~~~~~~g~~~~ 357 (388)
T 1w3b_A 329 RKALEVFPEFAAAHSNLASVLQQQGKLQE 357 (388)
T ss_dssp HHHTTSCTTCHHHHHHHHHHHHTTTCCHH
T ss_pred HHHHhcCCCcHHHHHHHHHHHHHcCCHHH
Confidence 88888778777777778888777777644
No 54
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.39 E-value=5.2e-13 Score=145.10 Aligned_cols=107 Identities=13% Similarity=-0.029 Sum_probs=101.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|++++|+..|+++++++|+++.+|+++|.++. ..|++++|+++|++|++++|+++.+++++|.++... |++++ +++|
T Consensus 447 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~-g~~~~-~~~~ 523 (681)
T 2pzi_A 447 GDVAKATRKLDDLAERVGWRWRLVWYRAVAEL-LTGDYDSATKHFTEVLDTFPGELAPKLALAATAELA-GNTDE-HKFY 523 (681)
T ss_dssp TCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHH-TCCCT-TCHH
T ss_pred CCHHHHHHHHHHHhccCcchHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHc-CChHH-HHHH
Confidence 89999999999999999999999999999888 689999999999999999999999999999988775 69999 9999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
++|++++|+++.+++++|.++..+|+.+++
T Consensus 524 ~~al~~~P~~~~a~~~lg~~~~~~g~~~~A 553 (681)
T 2pzi_A 524 QTVWSTNDGVISAAFGLARARSAEGDRVGA 553 (681)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhCCchHHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999999999999987543
No 55
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.39 E-value=1.1e-12 Score=136.94 Aligned_cols=108 Identities=19% Similarity=0.195 Sum_probs=85.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|+++++++|++..+++++|.++. ..|++++|+++|+++++++|+++.++.++|.++... |++++|+++|
T Consensus 3 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-g~~~~A~~~~ 80 (568)
T 2vsy_A 3 ADGPRELLQLRAAVRHRPQDFVAWLMLADAEL-GMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQ-QRHAEAAVLL 80 (568)
T ss_dssp ------------------CCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHC-CCHHHHHHHH
Confidence 68999999999999999999999999999888 689999999999999999999999999999988775 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
++|++++|+++.++.++|.++...|+.+++
T Consensus 81 ~~al~~~p~~~~~~~~la~~~~~~g~~~~A 110 (568)
T 2vsy_A 81 QQASDAAPEHPGIALWLGHALEDAGQAEAA 110 (568)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999999999999987654
No 56
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.39 E-value=2.5e-12 Score=122.55 Aligned_cols=108 Identities=19% Similarity=0.281 Sum_probs=102.3
Q ss_pred CCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPN--DPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEE 491 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPd--n~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee 491 (536)
+++++|+.+|+++++++|+ ++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++... |++++|+.
T Consensus 195 ~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~-g~~~~A~~ 272 (368)
T 1fch_A 195 SLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFN-LSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANG-NQSEEAVA 272 (368)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHc-CCHHHHHH
Confidence 7999999999999999999 8999999999888 699999999999999999999999999999988874 69999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 492 TFLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 492 ~feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+|+++++++|+++.++.++|.++...|+.+++
T Consensus 273 ~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A 304 (368)
T 1fch_A 273 AYRRALELQPGYIRSRYNLGISCINLGAHREA 304 (368)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHH
Confidence 99999999999999999999999999987654
No 57
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.39 E-value=8.6e-13 Score=136.64 Aligned_cols=105 Identities=12% Similarity=0.184 Sum_probs=95.5
Q ss_pred CCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPND---------------PLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASF 478 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn---------------~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~ 478 (536)
++|++|+.+|++||+++|++ ..+|+|+|.+++ ..|++++|+.+|++||+++|+++.+++++|.+
T Consensus 282 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a 360 (457)
T 1kt0_A 282 GKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYL-KLREYTKAVECCDKALGLDSANEKGLYRRGEA 360 (457)
T ss_dssp TCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHH
Confidence 89999999999999999999 799999999888 69999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q 009385 479 LWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGE 520 (536)
Q Consensus 479 L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~ 520 (536)
+... |++++|+.+|++|++++|+++.++.+++.++..+|+.
T Consensus 361 ~~~~-g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 401 (457)
T 1kt0_A 361 QLLM-NEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEH 401 (457)
T ss_dssp HHHT-TCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHH
T ss_pred HHHc-cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 8875 6999999999999999999999999999999888854
No 58
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.39 E-value=2.1e-12 Score=107.27 Aligned_cols=91 Identities=16% Similarity=0.086 Sum_probs=84.3
Q ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 009385 431 PNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANY 510 (536)
Q Consensus 431 Pdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~Ny 510 (536)
|.++..+.++|..++ ..|++++|+.+|+++++++|+++.++.++|.++... |++++|+.+|++|++++|+++.++.++
T Consensus 1 p~~a~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~~~p~~~~~~~~l 78 (126)
T 3upv_A 1 SMKAEEARLEGKEYF-TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKL-MSFPEAIADCNKAIEKDPNFVRAYIRK 78 (126)
T ss_dssp CHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CchHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHh-cCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 456788999999888 699999999999999999999999999999998875 699999999999999999999999999
Q ss_pred HHHHHHcCCCccc
Q 009385 511 ANFLWNTGGEDTC 523 (536)
Q Consensus 511 A~~L~elGr~E~c 523 (536)
|.++..+|+.+++
T Consensus 79 g~~~~~~~~~~~A 91 (126)
T 3upv_A 79 ATAQIAVKEYASA 91 (126)
T ss_dssp HHHHHHTTCHHHH
T ss_pred HHHHHHHhCHHHH
Confidence 9999999997654
No 59
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.38 E-value=4e-12 Score=104.57 Aligned_cols=100 Identities=15% Similarity=0.145 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 009385 418 RTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAI 497 (536)
Q Consensus 418 eAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKAL 497 (536)
+|+..|+++++.+|+++.+++++|.+++ ..|++++|+.+|+++++++|+++.+++++|.++... |++++|+.+|++|+
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~-g~~~~A~~~~~~al 80 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYA-EHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQ-GDRAGARQAWESGL 80 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHc-CCHHHHHHHHHHHH
Confidence 5889999999999999999999999887 699999999999999999999999999999988875 69999999999999
Q ss_pred HhCCC--CHHHHHHHHHHHHHcCC
Q 009385 498 SADPT--NSYYAANYANFLWNTGG 519 (536)
Q Consensus 498 eLDPd--Npeal~NyA~~L~elGr 519 (536)
+++|+ +......+...+..+|+
T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 81 AAAQSRGDQQVVKELQVFLRRLAR 104 (115)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HhccccccHHHHHHHHHHHHHhcc
Confidence 99984 55666777777766654
No 60
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.38 E-value=2.4e-12 Score=114.64 Aligned_cols=104 Identities=14% Similarity=0.091 Sum_probs=96.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|++++ +| ++.+++++|.++. ..|++++|+++|+++++++|+++.+++++|.++... |++++|+.+|
T Consensus 20 ~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~-~~~~~A~~~~ 94 (213)
T 1hh8_A 20 KDWKGALDAFSAVQ--DP-HSRICFNIGCMYT-ILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQT-EKYDLAIKDL 94 (213)
T ss_dssp TCHHHHHHHHHTSS--SC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred CCHHHHHHHHHHHc--CC-ChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHc-ccHHHHHHHH
Confidence 89999999999996 45 7899999999887 699999999999999999999999999999988875 6999999999
Q ss_pred HHHHHhCCCCH----------------HHHHHHHHHHHHcCCCcc
Q 009385 494 LEAISADPTNS----------------YYAANYANFLWNTGGEDT 522 (536)
Q Consensus 494 eKALeLDPdNp----------------eal~NyA~~L~elGr~E~ 522 (536)
++++++.|++. .++.++|.++..+|+.++
T Consensus 95 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 139 (213)
T 1hh8_A 95 KEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKK 139 (213)
T ss_dssp HHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHH
Confidence 99999998877 899999999999998653
No 61
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.38 E-value=3.4e-13 Score=119.55 Aligned_cols=108 Identities=12% Similarity=0.031 Sum_probs=79.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|++++|+.+|++++..+| ++..+..++.+.....++..+|+.+|+++++++|+++.+++++|.++... |++++|+.+|
T Consensus 54 g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~-g~~~~A~~~~ 131 (176)
T 2r5s_A 54 KQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQV-GRDEEALELL 131 (176)
T ss_dssp TCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-ccHHHHHHHH
Confidence 778888888888888888 77666555544332223344578888888888888888888888877664 6888888888
Q ss_pred HHHHHhCCCC--HHHHHHHHHHHHHcCCCccc
Q 009385 494 LEAISADPTN--SYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 494 eKALeLDPdN--peal~NyA~~L~elGr~E~c 523 (536)
+++++++|++ +.++.+++.++..+|+.+++
T Consensus 132 ~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A 163 (176)
T 2r5s_A 132 WNILKVNLGAQDGEVKKTFMDILSALGQGNAI 163 (176)
T ss_dssp HHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHH
T ss_pred HHHHHhCcccChHHHHHHHHHHHHHhCCCCcH
Confidence 8888888875 55788888888888877654
No 62
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.38 E-value=6.1e-12 Score=122.38 Aligned_cols=110 Identities=15% Similarity=0.192 Sum_probs=90.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+++++++.+|+++.+++++|.++. ..|++++|+++|+++++++|+++.++.++|.++... |++++|+.+|
T Consensus 47 ~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~-g~~~~A~~~~ 124 (388)
T 1w3b_A 47 RRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYK-ERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAA-GDMEGAVQAY 124 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-SCSSHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCchHHHHHHHHHHH-HCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHc-CCHHHHHHHH
Confidence 78888888888888888888888888888777 578888888888888888888888888888877764 5888888888
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCccccC
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTCFP 525 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~clp 525 (536)
+++++++|+++.++.++|.++...|+.+++..
T Consensus 125 ~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 156 (388)
T 1w3b_A 125 VSALQYNPDLYCVRSDLGNLLKALGRLEEAKA 156 (388)
T ss_dssp HHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHccCHHHHHH
Confidence 88888888888888888888888888766543
No 63
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.38 E-value=4.3e-12 Score=116.21 Aligned_cols=67 Identities=15% Similarity=0.242 Sum_probs=64.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWR 481 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e 481 (536)
|++++|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|+++++++|+++.+++++|.+++.
T Consensus 68 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~ 134 (208)
T 3urz_A 68 RNYDKAYLFYKELLQKAPNNVDCLEACAEMQV-CRGQEKDALRMYEKILQLEADNLAANIFLGNYYYL 134 (208)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 89999999999999999999999999999888 69999999999999999999999999999987754
No 64
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.38 E-value=4.5e-12 Score=111.39 Aligned_cols=112 Identities=15% Similarity=0.098 Sum_probs=100.9
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHhcCCHHH
Q 009385 412 DYADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVA-HDYDRAEEYFKRAIA--VEPPDAESFSKYASFLWRVRNDLWA 488 (536)
Q Consensus 412 d~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~-GD~deAEe~FeKALe--LDPddaeAL~nLG~~L~e~~GD~eE 488 (536)
..+++++|+.+|+++++.+|++..++.++|.++. .. |++++|+.+|+++++ .+|++..++.++|.++... |++++
T Consensus 54 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~ 131 (225)
T 2vq2_A 54 YLKVNDKAQESFRQALSIKPDSAEINNNYGWFLC-GRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQ-GQFGL 131 (225)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHT-TCHHH
T ss_pred HcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHc-CCHHH
Confidence 3489999999999999999999999999998887 68 999999999999999 7778889999999988764 69999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccccC
Q 009385 489 AEETFLEAISADPTNSYYAANYANFLWNTGGEDTCFP 525 (536)
Q Consensus 489 Aee~feKALeLDPdNpeal~NyA~~L~elGr~E~clp 525 (536)
|+.+|+++++.+|+++.++.++|.++...|+.+++..
T Consensus 132 A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 168 (225)
T 2vq2_A 132 AEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADY 168 (225)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHH
Confidence 9999999999999999999999999999999876543
No 65
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.37 E-value=1.3e-12 Score=121.44 Aligned_cols=95 Identities=13% Similarity=0.033 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHHhCCHHHHHHHHHHHHHh-------CCCCHHHH--
Q 009385 414 ADYFRTELLYQTGLAQEPN-------DPL-----LLANYAQFLYIVAHDYDRAEEYFKRAIAV-------EPPDAESF-- 472 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPd-------n~e-----AL~NLA~lL~e~~GD~deAEe~FeKALeL-------DPddaeAL-- 472 (536)
|+|++|+..|++||+++|+ +.. +|.|+|.++. ..|++++|+.+|++||++ +|+++.+|
T Consensus 25 g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~-~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~ 103 (159)
T 2hr2_A 25 GEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALA-GLRSFDEALHSADKALHYFNRRGELNQDEGKLWIS 103 (159)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHH
Confidence 8999999999999999999 544 9999999888 699999999999999999 99999999
Q ss_pred --HHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 009385 473 --SKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANY 510 (536)
Q Consensus 473 --~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~Ny 510 (536)
++.|.+|... |++++|+.+|++|++++|++..+...+
T Consensus 104 ~~~~rG~aL~~l-gr~eEAl~~y~kAlel~p~d~~~~~~~ 142 (159)
T 2hr2_A 104 AVYSRALALDGL-GRGAEAMPEFKKVVEMIEERKGETPGK 142 (159)
T ss_dssp HHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHCCSCCTTH
T ss_pred HHHhHHHHHHHC-CCHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 9999998875 699999999999999999987654333
No 66
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.37 E-value=4.4e-12 Score=111.44 Aligned_cols=110 Identities=16% Similarity=0.080 Sum_probs=97.4
Q ss_pred cc-CCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHH
Q 009385 412 DY-ADYFRTELLYQTGLA--QEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWA 488 (536)
Q Consensus 412 d~-gdyeeAee~YqKALe--LdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eE 488 (536)
.. +++++|+.+|+++++ .+|++..++.++|.++. ..|++++|+.+|+++++.+|+++.++..+|.++... |++++
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~~~ 165 (225)
T 2vq2_A 88 GRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSA-KQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLA-GQLGD 165 (225)
T ss_dssp TTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH-TCHHH
T ss_pred HhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHc-CCHHH
Confidence 55 899999999999999 77777899999998877 689999999999999999999999999999988775 69999
Q ss_pred HHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCCccc
Q 009385 489 AEETFLEAISADP-TNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 489 Aee~feKALeLDP-dNpeal~NyA~~L~elGr~E~c 523 (536)
|+.+|+++++++| +++.++..++.++...|+.+.+
T Consensus 166 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 201 (225)
T 2vq2_A 166 ADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAA 201 (225)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHH
Confidence 9999999999999 9999988888888888887654
No 67
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.36 E-value=6.1e-12 Score=104.44 Aligned_cols=94 Identities=16% Similarity=0.118 Sum_probs=85.9
Q ss_pred HhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHH
Q 009385 428 AQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYA 507 (536)
Q Consensus 428 eLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal 507 (536)
..+|.++..++++|..++ ..|++++|+.+|+++++++|+++.++.++|.++... |++++|+.+|++|++++|+++.++
T Consensus 3 ~~~~~~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~al~~~p~~~~~~ 80 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKM-QQPEQALADCRRALELDGQSVKAH 80 (137)
T ss_dssp ---CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCccccHHHHHHHHHHHH-HhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHhCchhHHHH
Confidence 467889999999999888 699999999999999999999999999999988875 699999999999999999999999
Q ss_pred HHHHHHHHHcCCCccc
Q 009385 508 ANYANFLWNTGGEDTC 523 (536)
Q Consensus 508 ~NyA~~L~elGr~E~c 523 (536)
+++|.++..+|+.+++
T Consensus 81 ~~l~~~~~~~~~~~~A 96 (137)
T 3q49_B 81 FFLGQCQLEMESYDEA 96 (137)
T ss_dssp HHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHhhHHHH
Confidence 9999999999987654
No 68
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.36 E-value=6e-12 Score=116.88 Aligned_cols=109 Identities=24% Similarity=0.312 Sum_probs=102.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++.+|+++.++..+|.++.. .|++++|+.+|
T Consensus 152 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 229 (327)
T 3cv0_A 152 NEYRECRTLLHAALEMNPNDAQLHASLGVLYN-LSNNYDSAAANLRRAVELRPDDAQLWNKLGATLAN-GNRPQEALDAY 229 (327)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 79999999999999999999999999999887 69999999999999999999999999999998887 46999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCcccc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~cl 524 (536)
+++++++|+++.++.++|.++...|+.+++.
T Consensus 230 ~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 260 (327)
T 3cv0_A 230 NRALDINPGYVRVMYNMAVSYSNMSQYDLAA 260 (327)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHhccHHHHH
Confidence 9999999999999999999999999876543
No 69
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.36 E-value=1.2e-12 Score=135.80 Aligned_cols=109 Identities=11% Similarity=-0.027 Sum_probs=102.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh--------CCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHh
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVA--------HDYDRAEEYFKRAIAVEP---PDAESFSKYASFLWRV 482 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~--------GD~deAEe~FeKALeLDP---ddaeAL~nLG~~L~e~ 482 (536)
+++++|+.+|++|++++|+++.+|+++|.++. .. |++++|+.+|++|++++| +++.+++++|.++...
T Consensus 193 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~ 271 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLDGRSWYILGNAYL-SLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYE 271 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHc
Confidence 79999999999999999999999999999887 57 999999999999999999 9999999999988875
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcccc
Q 009385 483 RNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 483 ~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~cl 524 (536)
|++++|+++|++|++++|+++.++.+++.++..+|+.++++
T Consensus 272 -g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi 312 (474)
T 4abn_A 272 -ESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLL 312 (474)
T ss_dssp -TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999776544
No 70
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.36 E-value=4.6e-12 Score=122.29 Aligned_cols=108 Identities=18% Similarity=0.141 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHH----------------------------------HH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEY----------------------------------FK 459 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~----------------------------------Fe 459 (536)
|++++|+..|+++++++|+++.+++++|.++. ..|++++|+.+ |+
T Consensus 131 g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~ 209 (287)
T 3qou_A 131 SNYTDALPLLXDAWQLSNQNGEIGLLLAETLI-ALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQ 209 (287)
T ss_dssp TCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH-HTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcchhHHHHHHHHHH-HCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHH
Confidence 89999999999999999999999999998877 57888876644 55
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCCCccc
Q 009385 460 RAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTN--SYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 460 KALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdN--peal~NyA~~L~elGr~E~c 523 (536)
++++.+|+++++++++|.++.. .|++++|++.|+++++.+|++ +.++.+++.++..+|+.+.+
T Consensus 210 ~al~~~P~~~~~~~~la~~l~~-~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a 274 (287)
T 3qou_A 210 QQVAENPEDAALATQLALQLHQ-VGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDAL 274 (287)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHH
T ss_pred HHHhcCCccHHHHHHHHHHHHH-cccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcH
Confidence 5577788888888888887765 468888888888888888887 77788888888888876543
No 71
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.36 E-value=4e-12 Score=138.20 Aligned_cols=108 Identities=13% Similarity=-0.078 Sum_probs=102.3
Q ss_pred cCCHHHHHHHHHHHH--------HhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcC
Q 009385 413 YADYFRTELLYQTGL--------AQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRN 484 (536)
Q Consensus 413 ~gdyeeAee~YqKAL--------eLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~G 484 (536)
.+++++|++.|++++ +.+|++..+++++|.++. ..|++++|+..|+++++++|+++.+++++|.++... |
T Consensus 404 ~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~-g 481 (681)
T 2pzi_A 404 LSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALL-DLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLT-G 481 (681)
T ss_dssp TCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-T
T ss_pred ccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHH-hcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHc-C
Confidence 389999999999999 999999999999999888 689999999999999999999999999999988875 6
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009385 485 DLWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDT 522 (536)
Q Consensus 485 D~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~ 522 (536)
++++|+++|++|++++|+++.++.++|.++..+|++++
T Consensus 482 ~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~ 519 (681)
T 2pzi_A 482 DYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE 519 (681)
T ss_dssp CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH
Confidence 99999999999999999999999999999999999876
No 72
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.36 E-value=7.3e-12 Score=116.29 Aligned_cols=110 Identities=14% Similarity=0.099 Sum_probs=103.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++..+|.++... |++++|+.+|
T Consensus 186 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~ 263 (327)
T 3cv0_A 186 NNYDSAAANLRRAVELRPDDAQLWNKLGATLA-NGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNM-SQYDLAAKQL 263 (327)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh-ccHHHHHHHH
Confidence 89999999999999999999999999999888 699999999999999999999999999999988764 7999999999
Q ss_pred HHHHHhCCC------------CHHHHHHHHHHHHHcCCCccccC
Q 009385 494 LEAISADPT------------NSYYAANYANFLWNTGGEDTCFP 525 (536)
Q Consensus 494 eKALeLDPd------------Npeal~NyA~~L~elGr~E~clp 525 (536)
+++++++|+ ++.++.+++.++..+|+.+.+..
T Consensus 264 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 307 (327)
T 3cv0_A 264 VRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVEL 307 (327)
T ss_dssp HHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHH
Confidence 999999999 79999999999999998765443
No 73
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.35 E-value=1.6e-12 Score=134.72 Aligned_cols=108 Identities=15% Similarity=0.078 Sum_probs=77.5
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh---------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh--
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVA---------HDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRV-- 482 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~---------GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~-- 482 (536)
|++++|+.+|++|++++|+ ..++.++|.++. .. |++++|+++|++|++++|+++.+++++|.++...
T Consensus 151 g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~-~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~ 228 (474)
T 4abn_A 151 GDVTSAHTCFSGALTHCKN-KVSLQNLSMVLR-QLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYF 228 (474)
T ss_dssp TCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHT-TCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHH-HhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 6777777777777777776 577777776665 46 7777777777777777777777777777766653
Q ss_pred ---c--CCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHcCCCccc
Q 009385 483 ---R--NDLWAAEETFLEAISADP---TNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 483 ---~--GD~eEAee~feKALeLDP---dNpeal~NyA~~L~elGr~E~c 523 (536)
. |++++|+.+|++|++++| +++.++.++|.++...|+++++
T Consensus 229 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A 277 (474)
T 4abn_A 229 NTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEA 277 (474)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHH
T ss_pred hhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHH
Confidence 0 367777777777777777 7777777777777777776543
No 74
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.35 E-value=5.9e-12 Score=115.25 Aligned_cols=104 Identities=12% Similarity=0.152 Sum_probs=97.5
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|..++.. +++++|+.+|
T Consensus 88 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~ 165 (272)
T 3u4t_A 88 GQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFY-NKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYN-KEYVKADSSF 165 (272)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH-HTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 89999999999999999999999999999888 699999999999999999999999999999434443 5999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGG 519 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr 519 (536)
+++++++|+++.++.++|.++..+|+
T Consensus 166 ~~a~~~~p~~~~~~~~~~~~~~~~~~ 191 (272)
T 3u4t_A 166 VKVLELKPNIYIGYLWRARANAAQDP 191 (272)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHhCccchHHHHHHHHHHHHcCc
Confidence 99999999999999999999999987
No 75
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.35 E-value=3.8e-12 Score=115.57 Aligned_cols=109 Identities=17% Similarity=0.213 Sum_probs=101.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++++|+++.++..+|.++.. .|++++|+++|
T Consensus 51 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~ 128 (252)
T 2ho1_A 51 GNTEQAKVPLRKALEIDPSSADAHAALAVVFQ-TEMEPKLADEEYRKALASDSRNARVLNNYGGFLYE-QKRYEEAYQRL 128 (252)
T ss_dssp TCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CChHHHHHHHHHHHhcCCChHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH-HhHHHHHHHHH
Confidence 78999999999999999999999999999887 69999999999999999999999999999998876 46999999999
Q ss_pred HHHHH--hCCCCHHHHHHHHHHHHHcCCCcccc
Q 009385 494 LEAIS--ADPTNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 494 eKALe--LDPdNpeal~NyA~~L~elGr~E~cl 524 (536)
+++++ .+|.++.++.++|.++...|+.+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 161 (252)
T 2ho1_A 129 LEASQDTLYPERSRVFENLGLVSLQMKKPAQAK 161 (252)
T ss_dssp HHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHhCccCcccHHHHHHHHHHHHHcCCHHHHH
Confidence 99999 88999999999999999999876543
No 76
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.35 E-value=6e-12 Score=117.04 Aligned_cols=108 Identities=14% Similarity=0.055 Sum_probs=95.1
Q ss_pred C-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 414 A-DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 414 g-dyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
+ ++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|++..++..+|.++... |++++|+.+
T Consensus 104 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~ 181 (330)
T 3hym_B 104 GHKNEHARRYLSKATTLEKTYGPAWIAYGHSFA-VESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLT-NNSKLAERF 181 (330)
T ss_dssp CSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHT-TCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-hhHHHHHHH
Confidence 6 8899999999999999999999999998877 589999999999999999999999999999887764 689999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 493 FLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 493 feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
|+++++++|+++.++.++|.++...|+.+++
T Consensus 182 ~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A 212 (330)
T 3hym_B 182 FSQALSIAPEDPFVMHEVGVVAFQNGEWKTA 212 (330)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhCCCChHHHHHHHHHHHHcccHHHH
Confidence 9999999999999999999999999986543
No 77
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.35 E-value=5.1e-12 Score=99.49 Aligned_cols=89 Identities=16% Similarity=0.184 Sum_probs=78.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHhc-CCHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPP--DAESFSKYASFLWRVR-NDLWAAE 490 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPd--daeAL~nLG~~L~e~~-GD~eEAe 490 (536)
+++++|+.+|+++++++|++..++.++|.++. ..|++++|+.+|+++++++|+ +..++.++|.++.. . |++++|+
T Consensus 20 ~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~A~ 97 (112)
T 2kck_A 20 GNYTESIDLFEKAIQLDPEESKYWLMKGKALY-NLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRY-IEGKEVEAE 97 (112)
T ss_dssp CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTT-CSSCSHHHH
T ss_pred hhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH-HhCCHHHHH
Confidence 78999999999999999999999999998877 589999999999999999999 99999999987765 5 6899999
Q ss_pred HHHHHHHHhCCCCH
Q 009385 491 ETFLEAISADPTNS 504 (536)
Q Consensus 491 e~feKALeLDPdNp 504 (536)
++|++++..+|.++
T Consensus 98 ~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 98 IAEARAKLEHHHHH 111 (112)
T ss_dssp HHHHHHGGGCCCCC
T ss_pred HHHHHHhhcccCCC
Confidence 99999999988763
No 78
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.35 E-value=8.9e-12 Score=113.56 Aligned_cols=88 Identities=13% Similarity=0.028 Sum_probs=41.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|++...+..++.. .. .|++++|+.+|
T Consensus 91 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~-~~~~~~A~~~~ 167 (275)
T 1xnf_A 91 GNFDAAYEAFDSVLELDPTYNYAHLNRGIALY-YGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQ-KLDEKQAKEVL 167 (275)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HH-HHCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCccccHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HH-hcCHHHHHHHH
Confidence 45555555555555555555555555554444 34555555555555555555554444433322 11 13455555555
Q ss_pred HHHHHhCCCCH
Q 009385 494 LEAISADPTNS 504 (536)
Q Consensus 494 eKALeLDPdNp 504 (536)
++++...|++.
T Consensus 168 ~~~~~~~~~~~ 178 (275)
T 1xnf_A 168 KQHFEKSDKEQ 178 (275)
T ss_dssp HHHHHHSCCCS
T ss_pred HHHHhcCCcch
Confidence 55555544443
No 79
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.35 E-value=6.9e-12 Score=120.70 Aligned_cols=108 Identities=17% Similarity=0.125 Sum_probs=90.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC---------------------------
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEP--------------------------- 466 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDP--------------------------- 466 (536)
|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|
T Consensus 113 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g 191 (365)
T 4eqf_A 113 ENEQAAIVALQRCLELQPNNLKALMALAVSYT-NTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSS 191 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCH
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-ccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhh
Confidence 78888999999999999988888888888776 57887777777777666554
Q ss_pred -----------------C--CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 467 -----------------P--DAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 467 -----------------d--daeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+ ++.++.++|.++... |++++|+.+|+++++++|+++.++.++|.++...|+.+++
T Consensus 192 ~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 266 (365)
T 4eqf_A 192 VLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLS-GEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEA 266 (365)
T ss_dssp HHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred hHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 4 788899999888764 6999999999999999999999999999999999987554
No 80
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.35 E-value=4e-12 Score=110.81 Aligned_cols=92 Identities=14% Similarity=0.107 Sum_probs=85.5
Q ss_pred CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 009385 430 EPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAAN 509 (536)
Q Consensus 430 dPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~N 509 (536)
++.++..++++|.+++ ..|++++|+.+|+++++++|+++.+++++|.++... |++++|+.+|++|++++|+++.++++
T Consensus 7 ~~~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~p~~~~~~~~ 84 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAM-ARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSAS-GQHEKAAEDAELATVVDPKYSKAWSR 84 (164)
T ss_dssp CCHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhhhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHc-cCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 5667889999999888 699999999999999999999999999999998875 69999999999999999999999999
Q ss_pred HHHHHHHcCCCccc
Q 009385 510 YANFLWNTGGEDTC 523 (536)
Q Consensus 510 yA~~L~elGr~E~c 523 (536)
+|.++..+|+++++
T Consensus 85 lg~~~~~~g~~~~A 98 (164)
T 3sz7_A 85 LGLARFDMADYKGA 98 (164)
T ss_dssp HHHHHHHTTCHHHH
T ss_pred HHHHHHHccCHHHH
Confidence 99999999987644
No 81
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.35 E-value=5.2e-12 Score=117.49 Aligned_cols=108 Identities=16% Similarity=0.112 Sum_probs=98.7
Q ss_pred CCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH------
Q 009385 414 ADYFRTELLYQTGLAQEPND---PLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD---AESFSKYASFLWR------ 481 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn---~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd---aeAL~nLG~~L~e------ 481 (536)
|++++|+..|+++++.+|++ +.+++++|.+++ ..|++++|+.+|+++++++|++ +.+++.+|.++..
T Consensus 29 g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~ 107 (261)
T 3qky_A 29 GKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYY-QNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYE 107 (261)
T ss_dssp TCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTT
T ss_pred CCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhccccc
Confidence 89999999999999999999 999999999988 6999999999999999998865 6789999998876
Q ss_pred --hcCCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCCccc
Q 009385 482 --VRNDLWAAEETFLEAISADPTNSYYA-----------------ANYANFLWNTGGEDTC 523 (536)
Q Consensus 482 --~~GD~eEAee~feKALeLDPdNpeal-----------------~NyA~~L~elGr~E~c 523 (536)
. |++++|+.+|+++++.+|+++.+. +++|.++...|+++++
T Consensus 108 ~~~-~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 167 (261)
T 3qky_A 108 LDQ-TDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAA 167 (261)
T ss_dssp SCC-HHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred ccc-hhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHH
Confidence 5 599999999999999999997765 8889999999997654
No 82
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.35 E-value=2.8e-12 Score=117.38 Aligned_cols=105 Identities=17% Similarity=0.250 Sum_probs=64.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHhcCCHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDA----ESFSKYASFLWRVRNDLWAA 489 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdda----eAL~nLG~~L~e~~GD~eEA 489 (536)
+++++|+.+|+++++.+|+++.++.++|.+++ ..|++++|+.+|+++++ .|+++ .++..+|.++... |++++|
T Consensus 17 ~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~-~~~~~A 93 (272)
T 3u4t_A 17 NNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYY-ELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKK-GQDSLA 93 (272)
T ss_dssp TCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHH-HTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHT-TCHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHc-ccHHHH
Confidence 56666666666666666666666666666555 46666666666666666 33332 2366666655543 466666
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009385 490 EETFLEAISADPTNSYYAANYANFLWNTGGED 521 (536)
Q Consensus 490 ee~feKALeLDPdNpeal~NyA~~L~elGr~E 521 (536)
+.+|+++++++|+++.++.++|.++...|+.+
T Consensus 94 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~ 125 (272)
T 3u4t_A 94 IQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFP 125 (272)
T ss_dssp HHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHccCHH
Confidence 66666666666666666666666666666543
No 83
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.34 E-value=2.3e-12 Score=130.88 Aligned_cols=106 Identities=12% Similarity=0.104 Sum_probs=99.8
Q ss_pred CCHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLA----------------QEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYAS 477 (536)
Q Consensus 414 gdyeeAee~YqKALe----------------LdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~ 477 (536)
++|++|+.+|++||+ ++|.+..+|+|+|.+++ ..|++++|+++|++||+++|+++.+++++|.
T Consensus 237 g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 315 (370)
T 1ihg_A 237 QNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKL-KMSDWQGAVDSCLEALEIDPSNTKALYRRAQ 315 (370)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 899999999999999 88999999999999888 6999999999999999999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009385 478 FLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGED 521 (536)
Q Consensus 478 ~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E 521 (536)
++... |++++|+.+|++|++++|+++.++..++.++..+++.+
T Consensus 316 ~~~~~-g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~ 358 (370)
T 1ihg_A 316 GWQGL-KEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQK 358 (370)
T ss_dssp HHHHT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHc-cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 88875 69999999999999999999999999999998887654
No 84
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.34 E-value=4.2e-12 Score=113.91 Aligned_cols=109 Identities=17% Similarity=0.146 Sum_probs=100.9
Q ss_pred CCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-----------------------
Q 009385 414 ADYFRTELLYQTGLAQEPND-------PLLLANYAQFLYIVAHDYDRAEEYFKRAIA----------------------- 463 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn-------~eAL~NLA~lL~e~~GD~deAEe~FeKALe----------------------- 463 (536)
+++++|+.+|+++++++|++ +.++.++|.++. ..|++++|+.+|+++++
T Consensus 52 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~ 130 (258)
T 3uq3_A 52 GEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYH-KLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEA 130 (258)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHH-HcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHH
Confidence 89999999999999999988 799999999887 69999999999999999
Q ss_pred ---hCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcccc
Q 009385 464 ---VEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 464 ---LDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~cl 524 (536)
.+|+++.++..+|.++... |++++|+.+|+++++++|+++.++.++|.++...|+.+++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 193 (258)
T 3uq3_A 131 EAYVNPEKAEEARLEGKEYFTK-SDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAI 193 (258)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHcCcchHHHHHHHHHHHHHh-cCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHH
Confidence 7788889999999988875 69999999999999999999999999999999999876543
No 85
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.33 E-value=3e-12 Score=100.79 Aligned_cols=93 Identities=18% Similarity=0.193 Sum_probs=86.5
Q ss_pred hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC--CHHH
Q 009385 429 QEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPT--NSYY 506 (536)
Q Consensus 429 LdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPd--Npea 506 (536)
++|+++.++.++|.+++ ..|++++|+.+|+++++++|+++.++.++|.++... |++++|+.+|+++++++|+ ++.+
T Consensus 1 l~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~a~~~~~~~~~~~~ 78 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQY-DAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNL-ERYEEAVDCYNYVINVIEDEYNKDV 78 (112)
T ss_dssp CCCSSTTGGGGHHHHHH-SSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTSCCTTCHHH
T ss_pred CCCCcHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHc-cCHHHHHHHHHHHHHhCcccchHHH
Confidence 47999999999999887 689999999999999999999999999999988875 6999999999999999999 9999
Q ss_pred HHHHHHHHHHc-CCCccc
Q 009385 507 AANYANFLWNT-GGEDTC 523 (536)
Q Consensus 507 l~NyA~~L~el-Gr~E~c 523 (536)
+.++|.++... |+.+++
T Consensus 79 ~~~l~~~~~~~~~~~~~A 96 (112)
T 2kck_A 79 WAAKADALRYIEGKEVEA 96 (112)
T ss_dssp HHHHHHHHTTCSSCSHHH
T ss_pred HHHHHHHHHHHhCCHHHH
Confidence 99999999999 987644
No 86
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.33 E-value=9.4e-12 Score=115.69 Aligned_cols=108 Identities=10% Similarity=0.031 Sum_probs=101.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAH-DYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~G-D~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
+++++|+.+|+++++.+|+++.++..+|.++. ..| ++++|+.+|+++++++|+++.++..+|.++... |++++|+.+
T Consensus 70 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~ 147 (330)
T 3hym_B 70 NKANELFYLSHKLVDLYPSNPVSWFAVGCYYL-MVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVE-SEHDQAMAA 147 (330)
T ss_dssp TCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHH-HSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHH-TCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHc-cCHHHHHHH
Confidence 89999999999999999999999999998887 688 999999999999999999999999999988875 699999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 493 FLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 493 feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
|+++++++|++...+.++|.++...|+.+++
T Consensus 148 ~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A 178 (330)
T 3hym_B 148 YFTAAQLMKGCHLPMLYIGLEYGLTNNSKLA 178 (330)
T ss_dssp HHHHHHHTTTCSHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhccccHHHHHHHHHHHHHHhhHHHH
Confidence 9999999999999999999999999987543
No 87
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.33 E-value=9.8e-12 Score=116.23 Aligned_cols=109 Identities=11% Similarity=0.130 Sum_probs=101.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++..+|.++... |++++|+.+|
T Consensus 17 g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~ 94 (359)
T 3ieg_A 17 GQLADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQ-GKLDEAEDDF 94 (359)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-TCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHc-CChHHHHHHH
Confidence 89999999999999999999999999999888 689999999999999999999999999999988875 6999999999
Q ss_pred HHHHHhCC---CCHHHHHHH------------HHHHHHcCCCcccc
Q 009385 494 LEAISADP---TNSYYAANY------------ANFLWNTGGEDTCF 524 (536)
Q Consensus 494 eKALeLDP---dNpeal~Ny------------A~~L~elGr~E~cl 524 (536)
+++++++| +++.++..+ |.++...|+.+++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~ 140 (359)
T 3ieg_A 95 KKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAI 140 (359)
T ss_dssp HHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence 99999999 999888877 68889999876543
No 88
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.33 E-value=1.4e-11 Score=95.25 Aligned_cols=86 Identities=27% Similarity=0.407 Sum_probs=79.2
Q ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 009385 431 PNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANY 510 (536)
Q Consensus 431 Pdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~Ny 510 (536)
|+++.+++++|.++. ..|++++|+.+|+++++++|+++.++.++|.++... |++++|+.+|+++++++|+++.++.++
T Consensus 6 ~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~~~~p~~~~~~~~l 83 (91)
T 1na3_A 6 GNSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQ-GDYDEAIEYYQKALELDPNNAEAKQNL 83 (91)
T ss_dssp CHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cccHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH-hhHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 346789999998887 699999999999999999999999999999988874 699999999999999999999999999
Q ss_pred HHHHHHcC
Q 009385 511 ANFLWNTG 518 (536)
Q Consensus 511 A~~L~elG 518 (536)
|.++...|
T Consensus 84 ~~~~~~~g 91 (91)
T 1na3_A 84 GNAKQKQG 91 (91)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcC
Confidence 99998765
No 89
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.31 E-value=1.8e-11 Score=107.02 Aligned_cols=93 Identities=18% Similarity=0.231 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCH--HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDY--DRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEE 491 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~--deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee 491 (536)
+++++|+.+|+++++++|+++.++.++|.+++...|++ ++|+.+|+++++++|+++.++.++|.++... |++++|+.
T Consensus 58 ~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~-g~~~~A~~ 136 (177)
T 2e2e_A 58 NDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQ-ANYAQAIE 136 (177)
T ss_dssp TCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-ccHHHHHH
Confidence 89999999999999999999999999999844368998 9999999999999999999999999988875 79999999
Q ss_pred HHHHHHHhCCCCHHHH
Q 009385 492 TFLEAISADPTNSYYA 507 (536)
Q Consensus 492 ~feKALeLDPdNpeal 507 (536)
+|+++++++|+++...
T Consensus 137 ~~~~al~~~p~~~~~~ 152 (177)
T 2e2e_A 137 LWQKVMDLNSPRINRT 152 (177)
T ss_dssp HHHHHHHTCCTTSCHH
T ss_pred HHHHHHhhCCCCccHH
Confidence 9999999999987543
No 90
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.30 E-value=2.1e-11 Score=97.38 Aligned_cols=92 Identities=13% Similarity=0.066 Sum_probs=83.7
Q ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHH
Q 009385 433 DPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTN------SYY 506 (536)
Q Consensus 433 n~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdN------pea 506 (536)
++.++.++|..++ ..|++++|+++|+++++++|+++.++.++|.++... |++++|+++|++|++++|++ +.+
T Consensus 3 ~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 80 (111)
T 2l6j_A 3 QFEKQKEQGNSLF-KQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKL-GEYTQAIQMCQQGLRYTSTAEHVAIRSKL 80 (111)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHTSCSSTTSHHHHHHH
T ss_pred hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHhCCCccHHHHHHHH
Confidence 4678999999888 689999999999999999999999999999988875 69999999999999999999 889
Q ss_pred HHHHHHHHHHcCCCccccCC
Q 009385 507 AANYANFLWNTGGEDTCFPL 526 (536)
Q Consensus 507 l~NyA~~L~elGr~E~clpl 526 (536)
+.++|.++..+|+.+.+...
T Consensus 81 ~~~~~~~~~~~~~~~~a~~~ 100 (111)
T 2l6j_A 81 QYRLELAQGAVGSVQIPVVE 100 (111)
T ss_dssp HHHHHHHHHHHHCCCCCSSS
T ss_pred HHHHHHHHHHHHhHhhhHhH
Confidence 99999999999987665543
No 91
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.30 E-value=2.5e-11 Score=118.15 Aligned_cols=105 Identities=14% Similarity=0.002 Sum_probs=49.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHH--HHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQ--FLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEE 491 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~--lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee 491 (536)
|++++|+..|+++++.+|++.......+. ++. ..|++++|+.+|+++++.+|+++.+++++|.++... |++++|+.
T Consensus 144 g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~-~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~-g~~~eA~~ 221 (291)
T 3mkr_A 144 DRLDLARKELKKMQDQDEDATLTQLATAWVSLAA-GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQ-GRWEAAEG 221 (291)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-CTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHT-TCHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-CCHHHHHH
Confidence 45555555555555555554432222111 111 124455555555555555555555555555444432 35555555
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q 009385 492 TFLEAISADPTNSYYAANYANFLWNTGGE 520 (536)
Q Consensus 492 ~feKALeLDPdNpeal~NyA~~L~elGr~ 520 (536)
+|++|++++|+++.++.|+|.++...|+.
T Consensus 222 ~l~~al~~~p~~~~~l~~l~~~~~~~g~~ 250 (291)
T 3mkr_A 222 VLQEALDKDSGHPETLINLVVLSQHLGKP 250 (291)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Confidence 55555555555555555555555555543
No 92
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.29 E-value=1.1e-11 Score=119.49 Aligned_cols=106 Identities=19% Similarity=0.217 Sum_probs=58.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPL-LLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~e-AL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
|++++|...|+++|+++|+++. +|.+||.++. ..|++++|..+|++|++.+|.+..++..++.+.+...|++++|+.+
T Consensus 113 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~ 191 (308)
T 2ond_A 113 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKI 191 (308)
T ss_dssp TCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHH-HHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccccCccHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 4555555555555555555554 5555555544 3555555555555555555555555554443332223455555555
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q 009385 493 FLEAISADPTNSYYAANYANFLWNTGGE 520 (536)
Q Consensus 493 feKALeLDPdNpeal~NyA~~L~elGr~ 520 (536)
|++|++++|+++.++.+|+.++...|+.
T Consensus 192 ~~~al~~~p~~~~~~~~~~~~~~~~g~~ 219 (308)
T 2ond_A 192 FELGLKKYGDIPEYVLAYIDYLSHLNED 219 (308)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHCCCH
Confidence 5555555555555555555555555554
No 93
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.29 E-value=3.5e-11 Score=117.09 Aligned_cols=94 Identities=11% Similarity=0.106 Sum_probs=86.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|+++++.+|+++.+++++|.++. ..|++++|+++|+++|+++|+|+++++++|.++...++..++|.+++
T Consensus 180 ~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~-~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~ 258 (291)
T 3mkr_A 180 EKLQDAYYIFQEMADKCSPTLLLLNGQAACHM-AQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYL 258 (291)
T ss_dssp THHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 79999999999999999999999999998877 69999999999999999999999999999998887653334578999
Q ss_pred HHHHHhCCCCHHHHH
Q 009385 494 LEAISADPTNSYYAA 508 (536)
Q Consensus 494 eKALeLDPdNpeal~ 508 (536)
+++++++|+++.+..
T Consensus 259 ~~~~~~~P~~~~~~d 273 (291)
T 3mkr_A 259 SQLKDAHRSHPFIKE 273 (291)
T ss_dssp HHHHHHCTTCHHHHH
T ss_pred HHHHHhCCCChHHHH
Confidence 999999999998754
No 94
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.27 E-value=1.3e-11 Score=105.57 Aligned_cols=91 Identities=10% Similarity=0.190 Sum_probs=80.6
Q ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH-------
Q 009385 432 NDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNS------- 504 (536)
Q Consensus 432 dn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNp------- 504 (536)
+.+.++.++|..++ ..|++++|+.+|++||+++|+++.++.++|.++... |++++|+++|++|++++|++.
T Consensus 6 d~A~a~~~lG~~~~-~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~-~~~~~A~~~~~~al~~~~~~~~~~~~~a 83 (127)
T 4gcn_A 6 DAAIAEKDLGNAAY-KQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEE-KKFAECVQFCEKAVEVGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHh-hhHHHHHHHHHHHHHhCcccchhhHHHH
Confidence 34567889999998 699999999999999999999999999999998875 699999999999999999874
Q ss_pred HHHHHHHHHHHHcCCCcccc
Q 009385 505 YYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 505 eal~NyA~~L~elGr~E~cl 524 (536)
.++.++|.++..+|+++++.
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~ 103 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAV 103 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHH
Confidence 46888999999999876543
No 95
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.27 E-value=1.1e-12 Score=130.11 Aligned_cols=108 Identities=10% Similarity=0.099 Sum_probs=101.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD---------------AESFSKYASF 478 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd---------------aeAL~nLG~~ 478 (536)
.++++|+.+|++++..+|+++.++.++|.+++ ..|++++|+.+|++|++++|++ +.+++++|.+
T Consensus 127 ~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~-~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~ 205 (336)
T 1p5q_A 127 KSFEKAKESWEMNSEEKLEQSTIVKERGTVYF-KEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMC 205 (336)
T ss_dssp EEEECCCCGGGCCHHHHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred eecccccchhcCCHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 57788999999999999999999999999988 6999999999999999999999 7999999998
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 479 LWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 479 L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+... |++++|+.+|++|++++|+++.+++++|.+|..+|+++++
T Consensus 206 ~~~~-g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A 249 (336)
T 1p5q_A 206 HLKL-QAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELA 249 (336)
T ss_dssp HHHT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHc-CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHH
Confidence 8875 6999999999999999999999999999999999997654
No 96
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.27 E-value=3.2e-11 Score=112.75 Aligned_cols=105 Identities=15% Similarity=0.054 Sum_probs=52.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC---CCHHHHHHH------------HHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEP---PDAESFSKY------------ASF 478 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDP---ddaeAL~nL------------G~~ 478 (536)
|++++|+.+|+++++++|++..++..+|.++. ..|++++|+.+|+++++++| ++..++..+ |.+
T Consensus 51 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ 129 (359)
T 3ieg_A 51 GKSKAALPDLTKVIALKMDFTAARLQRGHLLL-KQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALD 129 (359)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcchHHHHHHHHHH-HcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555555555555555554444 34555555555555555555 444444444 233
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q 009385 479 LWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGE 520 (536)
Q Consensus 479 L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~ 520 (536)
+.. .|++++|+.+|+++++.+|+++.++.++|.++...|+.
T Consensus 130 ~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3ieg_A 130 AFD-GADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEP 170 (359)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHH-ccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCH
Confidence 332 23455555555555555555555555555555555543
No 97
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.26 E-value=1.2e-11 Score=109.63 Aligned_cols=108 Identities=14% Similarity=0.045 Sum_probs=95.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|++++|+..|+++++++|+++.+++++|.++. ..|++++|+.+|+++++.+| ++..+..++.+.....++..+|+.+|
T Consensus 20 g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~ 97 (176)
T 2r5s_A 20 GEHAQALNVIQTLSDELQSRGDVKLAKADCLL-ETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRL 97 (176)
T ss_dssp TCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHH-HTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-HCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHH
Confidence 89999999999999999999999999999887 69999999999999999999 98887777755433222445689999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
++|++++|+++.+++++|.++...|+.+++
T Consensus 98 ~~al~~~P~~~~~~~~la~~~~~~g~~~~A 127 (176)
T 2r5s_A 98 EQELAANPDNFELACELAVQYNQVGRDEEA 127 (176)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcccHHHH
Confidence 999999999999999999999999987643
No 98
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.26 E-value=8e-11 Score=104.74 Aligned_cols=104 Identities=14% Similarity=0.077 Sum_probs=91.5
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDA----------------ESFSKYA 476 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdda----------------eAL~nLG 476 (536)
.|++++|+.+|+++++++|+++.+++++|.++. ..|++++|+++|++++++.|++. .+++++|
T Consensus 50 ~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (213)
T 1hh8_A 50 LKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYY-QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIA 128 (213)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHH
Confidence 389999999999999999999999999999888 69999999999999999888877 9999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 009385 477 SFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTG 518 (536)
Q Consensus 477 ~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elG 518 (536)
.++... |++++|+.+|++|++++|++.......+.......
T Consensus 129 ~~~~~~-g~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~ 169 (213)
T 1hh8_A 129 FMYAKK-EEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQ 169 (213)
T ss_dssp HHHHHT-TCHHHHHHHHHHHHTTCCSGGGGHHHHHHHHHHTT
T ss_pred HHHHHc-cCHHHHHHHHHHHHHcCcccccchHHHHHHHHHhc
Confidence 988875 69999999999999999987665555554444433
No 99
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.26 E-value=1.7e-11 Score=118.09 Aligned_cols=93 Identities=18% Similarity=0.280 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHhcCCHHHHHHHHH
Q 009385 417 FRTELLYQTGLA-QEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAE-SFSKYASFLWRVRNDLWAAEETFL 494 (536)
Q Consensus 417 eeAee~YqKALe-LdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddae-AL~nLG~~L~e~~GD~eEAee~fe 494 (536)
++|...|++|++ ++|++..+|.+||.++. ..|++++|.+.|+++++++|+++. +|.++|.++... |++++|+.+|+
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-~~~~~A~~~~~ 158 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNMLLYFAYADYEE-SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRA-EGIKSGRMIFK 158 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHH-HCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHH-hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHh-cCHHHHHHHHH
Confidence 444444555554 34444444444444433 344444555555555544444443 444444444332 24445555555
Q ss_pred HHHHhCCCCHHHHHHHH
Q 009385 495 EAISADPTNSYYAANYA 511 (536)
Q Consensus 495 KALeLDPdNpeal~NyA 511 (536)
+|++++|.+..++..++
T Consensus 159 ~a~~~~p~~~~~~~~~a 175 (308)
T 2ond_A 159 KAREDARTRHHVYVTAA 175 (308)
T ss_dssp HHHTSTTCCTHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHH
Confidence 55544444444433333
No 100
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.25 E-value=3.7e-11 Score=120.40 Aligned_cols=109 Identities=21% Similarity=0.316 Sum_probs=101.8
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
.+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++..+|.++... |++++|+.+
T Consensus 289 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~-g~~~~A~~~ 366 (537)
T 3fp2_A 289 KENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYF-ILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQ-GKFTESEAF 366 (537)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHT-TCHHHHHHH
T ss_pred hcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHHHH
Confidence 389999999999999999999999999999887 699999999999999999999999999999988764 699999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 493 FLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 493 feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
|+++++++|+++.++.++|.++...|+.+++
T Consensus 367 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 397 (537)
T 3fp2_A 367 FNETKLKFPTLPEVPTFFAEILTDRGDFDTA 397 (537)
T ss_dssp HHHHHHHCTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhCCCChHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999999999987654
No 101
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.25 E-value=8.1e-12 Score=120.46 Aligned_cols=89 Identities=12% Similarity=0.112 Sum_probs=84.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|++++|+.+|++|++++|+++.+++++|.++. ..|++++|+.+|++|++++|+++.+++++|.++... |++++|+.+|
T Consensus 18 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-g~~~~A~~~~ 95 (281)
T 2c2l_A 18 RKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEM-ESYDEAIANL 95 (281)
T ss_dssp TCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHHHHH
Confidence 89999999999999999999999999999888 699999999999999999999999999999988875 6999999999
Q ss_pred HHHHHhCCCCH
Q 009385 494 LEAISADPTNS 504 (536)
Q Consensus 494 eKALeLDPdNp 504 (536)
++|++++|+++
T Consensus 96 ~~al~l~p~~~ 106 (281)
T 2c2l_A 96 QRAYSLAKEQR 106 (281)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHhCccch
Confidence 99999999763
No 102
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.25 E-value=5.9e-12 Score=125.25 Aligned_cols=102 Identities=14% Similarity=0.076 Sum_probs=78.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDP-----------------LLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYA 476 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~-----------------eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG 476 (536)
++|++|+.+|++|+.++|++. .+++|+|.++. ..|++++|+.+|++||+++|+++.+++++|
T Consensus 193 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 271 (338)
T 2if4_A 193 EKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLI-KLKRYDEAIGHCNIVLTEEEKNPKALFRRG 271 (338)
T ss_dssp SCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHH-TTTCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 899999999999999999988 48999998887 699999999999999999999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 009385 477 SFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNT 517 (536)
Q Consensus 477 ~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~el 517 (536)
.++.. .|++++|+.+|++|++++|+++.++.+++.+....
T Consensus 272 ~a~~~-~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~ 311 (338)
T 2if4_A 272 KAKAE-LGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQE 311 (338)
T ss_dssp HHHHT-TTCHHHHHHHHHHTTC-------------------
T ss_pred HHHHH-cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 98876 47999999999999999999999999999885443
No 103
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.25 E-value=2.1e-11 Score=103.64 Aligned_cols=86 Identities=14% Similarity=-0.017 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 009385 436 LLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLW 515 (536)
Q Consensus 436 AL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~ 515 (536)
.++++|..+. ..|++++|+.+|+++++++|+++.+++.+|.++... |++++|+.+|++|++++|+++.++.++|.++.
T Consensus 19 ~~~~~g~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~-g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 19 NPMEEGLSML-KLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAEN-EKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp CHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 4677888877 689999999999999999999999999999988864 79999999999999999999999999999999
Q ss_pred HcCCCccc
Q 009385 516 NTGGEDTC 523 (536)
Q Consensus 516 elGr~E~c 523 (536)
..|+.+++
T Consensus 97 ~~g~~~~A 104 (121)
T 1hxi_A 97 NEHNANAA 104 (121)
T ss_dssp HHHHHHHH
T ss_pred HcCCHHHH
Confidence 99987543
No 104
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.23 E-value=3.4e-11 Score=97.88 Aligned_cols=92 Identities=22% Similarity=0.194 Sum_probs=85.4
Q ss_pred CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 009385 430 EPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAAN 509 (536)
Q Consensus 430 dPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~N 509 (536)
.|.+..+++++|..++ ..|++++|+++|+++++.+|+++.++.++|.++.. .|++++|+.+|+++++++|+++.++.+
T Consensus 12 ~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~ 89 (133)
T 2lni_A 12 NPDLALMVKNKGNECF-QKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTK-LLEFQLALKDCEECIQLEPTFIKGYTR 89 (133)
T ss_dssp SSCHHHHHHHHHHHHH-HTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTT-TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCCchHHHHH
Confidence 5778899999999888 69999999999999999999999999999998876 479999999999999999999999999
Q ss_pred HHHHHHHcCCCccc
Q 009385 510 YANFLWNTGGEDTC 523 (536)
Q Consensus 510 yA~~L~elGr~E~c 523 (536)
+|.++...|+.+++
T Consensus 90 la~~~~~~~~~~~A 103 (133)
T 2lni_A 90 KAAALEAMKDYTKA 103 (133)
T ss_dssp HHHHHHHTTCHHHH
T ss_pred HHHHHHHHhhHHHH
Confidence 99999999987654
No 105
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.23 E-value=7e-11 Score=116.00 Aligned_cols=108 Identities=11% Similarity=0.152 Sum_probs=98.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|++++|+.+|+++++.+|+++.+++++|.++. ..|++++|+.+|+++++++|+++.++..+|.++... |++++|+.+|
T Consensus 40 g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~-g~~~~A~~~~ 117 (450)
T 2y4t_A 40 GQLADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQ-GKLDEAEDDF 117 (450)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHc-CCHHHHHHHH
Confidence 89999999999999999999999999999888 699999999999999999999999999999988874 6999999999
Q ss_pred HHHHHhCCCCH---HHHHHH------------HHHHHHcCCCccc
Q 009385 494 LEAISADPTNS---YYAANY------------ANFLWNTGGEDTC 523 (536)
Q Consensus 494 eKALeLDPdNp---eal~Ny------------A~~L~elGr~E~c 523 (536)
+++++++|+++ .++..+ |.++...|+.+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A 162 (450)
T 2y4t_A 118 KKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAA 162 (450)
T ss_dssp HHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 99999999998 776555 6668888876554
No 106
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.22 E-value=1.7e-10 Score=114.63 Aligned_cols=109 Identities=14% Similarity=0.064 Sum_probs=83.1
Q ss_pred CCHHHHHHHHHHHHHh---------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQ---------EPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAV--------EPPDAESFSKYA 476 (536)
Q Consensus 414 gdyeeAee~YqKALeL---------dPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeL--------DPddaeAL~nLG 476 (536)
|++++|+++|++|+++ +|+...+|.|+|.+++ .+|++++|+.+|++++++ +++.+.++.++|
T Consensus 65 G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~-~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g 143 (472)
T 4g1t_A 65 GQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYY-HMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEG 143 (472)
T ss_dssp TCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHH
Confidence 7888888888888876 6777788888888777 588888888888888876 345678888888
Q ss_pred HHHHHhc-CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---cCCCccc
Q 009385 477 SFLWRVR-NDLWAAEETFLEAISADPTNSYYAANYANFLWN---TGGEDTC 523 (536)
Q Consensus 477 ~~L~e~~-GD~eEAee~feKALeLDPdNpeal~NyA~~L~e---lGr~E~c 523 (536)
..+...+ +++++|+++|++|++++|+++.++.+++.++.. .|+.+++
T Consensus 144 ~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~a 194 (472)
T 4g1t_A 144 WTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNA 194 (472)
T ss_dssp HHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCT
T ss_pred HHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHH
Confidence 7665433 468888888888888888888888888877544 4444443
No 107
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.22 E-value=1.3e-10 Score=113.98 Aligned_cols=109 Identities=14% Similarity=0.063 Sum_probs=91.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH---HHHHHH------------HHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDA---ESFSKY------------ASF 478 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdda---eAL~nL------------G~~ 478 (536)
|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|++. .++..+ |.+
T Consensus 74 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ 152 (450)
T 2y4t_A 74 GKSKAALPDLTKVIQLKMDFTAARLQRGHLLL-KQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALN 152 (450)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999998877 68999999999999999999888 776665 444
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcccc
Q 009385 479 LWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 479 L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~cl 524 (536)
+.. .|++++|+.+|+++++++|+++.++.++|.++...|+.+++.
T Consensus 153 ~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 197 (450)
T 2y4t_A 153 AFG-SGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAI 197 (450)
T ss_dssp HHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGGGGH
T ss_pred HHH-cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHHHHH
Confidence 655 468999999999999999998888888999998888877654
No 108
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.22 E-value=9.4e-11 Score=119.70 Aligned_cols=109 Identities=8% Similarity=0.063 Sum_probs=101.5
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|++++|+.+|+++++++|++..+|++++.++. ..|++++|+++|+++++.+|+++.++..+|.++... |++++|+++|
T Consensus 387 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~ 464 (597)
T 2xpi_A 387 NKISEARRYFSKSSTMDPQFGPAWIGFAHSFA-IEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQL-GNILLANEYL 464 (597)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHH-TCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHc-CCHHHHHHHH
Confidence 89999999999999999999999999998887 689999999999999999999999999999988775 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCcccc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~cl 524 (536)
+++++++|+++.++.+++.++...|+.+++.
T Consensus 465 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 495 (597)
T 2xpi_A 465 QSSYALFQYDPLLLNELGVVAFNKSDMQTAI 495 (597)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHhCCCChHHHHHHHHHHHHhCCHHHHH
Confidence 9999999999999999999999999876554
No 109
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.21 E-value=5e-11 Score=95.68 Aligned_cols=94 Identities=16% Similarity=0.184 Sum_probs=85.8
Q ss_pred HhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHH
Q 009385 428 AQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYA 507 (536)
Q Consensus 428 eLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal 507 (536)
+.+|+++.++..+|..++ ..|++++|+.+|+++++.+|+++.++..+|.++... |++++|+.+|+++++++|+++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~~~~~~~~~~~~~ 83 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQM-KVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKL-GNYAGAVQDCERAICIDPAYSKAY 83 (131)
T ss_dssp -CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hcchhhhHHHHHHHHHHH-HccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh-hchHHHHHHHHHHHhcCccCHHHH
Confidence 456778899999999888 699999999999999999999999999999988764 699999999999999999999999
Q ss_pred HHHHHHHHHcCCCccc
Q 009385 508 ANYANFLWNTGGEDTC 523 (536)
Q Consensus 508 ~NyA~~L~elGr~E~c 523 (536)
.++|.++...|+.+++
T Consensus 84 ~~~~~~~~~~~~~~~A 99 (131)
T 2vyi_A 84 GRMGLALSSLNKHVEA 99 (131)
T ss_dssp HHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhCCHHHH
Confidence 9999999999987543
No 110
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.20 E-value=1.6e-10 Score=91.36 Aligned_cols=89 Identities=15% Similarity=0.050 Sum_probs=81.9
Q ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009385 433 DPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYAN 512 (536)
Q Consensus 433 n~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~ 512 (536)
.+..++++|..+. ..|++++|+.+|++++..+|+++.++.++|.++... |++++|+.+|+++++++|+++.++.++|.
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 80 (118)
T 1elw_A 3 QVNELKEKGNKAL-SVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKK-GDYQKAYEDGCKTVDLKPDWGKGYSRKAA 80 (118)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 4678889998887 699999999999999999999999999999988875 69999999999999999999999999999
Q ss_pred HHHHcCCCccc
Q 009385 513 FLWNTGGEDTC 523 (536)
Q Consensus 513 ~L~elGr~E~c 523 (536)
++...|+.+++
T Consensus 81 ~~~~~~~~~~A 91 (118)
T 1elw_A 81 ALEFLNRFEEA 91 (118)
T ss_dssp HHHHTTCHHHH
T ss_pred HHHHHhhHHHH
Confidence 99999987543
No 111
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.20 E-value=2.8e-11 Score=109.35 Aligned_cols=108 Identities=22% Similarity=0.251 Sum_probs=97.5
Q ss_pred CCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQ--------EPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAV--------EPPDAESFSKYAS 477 (536)
Q Consensus 414 gdyeeAee~YqKALeL--------dPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeL--------DPddaeAL~nLG~ 477 (536)
+++++|+.+|++++++ +|....++.++|.++. ..|++++|+++|++++++ +|....++.++|.
T Consensus 57 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 135 (283)
T 3edt_B 57 NKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLAL 135 (283)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 8999999999999988 4667789999999887 699999999999999999 5788899999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCCccc
Q 009385 478 FLWRVRNDLWAAEETFLEAISA--------DPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 478 ~L~e~~GD~eEAee~feKALeL--------DPdNpeal~NyA~~L~elGr~E~c 523 (536)
++.. .|++++|+.+|++++++ +|....++.++|.++...|+.+++
T Consensus 136 ~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 188 (283)
T 3edt_B 136 LCQN-QGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDA 188 (283)
T ss_dssp HHHT-TTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHH-cCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHH
Confidence 8876 47999999999999999 777788899999999999987644
No 112
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.20 E-value=1.4e-10 Score=118.38 Aligned_cols=108 Identities=14% Similarity=0.143 Sum_probs=89.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCCC-HHHHHHHHHHHHHhcCCH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAV------EPPD-AESFSKYASFLWRVRNDL 486 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeL------DPdd-aeAL~nLG~~L~e~~GD~ 486 (536)
|++++|+++|+++++.+|+++.++.++|.++. ..|++++|+++|++++++ +|++ +.++..+|.++... |++
T Consensus 455 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~-g~~ 532 (597)
T 2xpi_A 455 GNILLANEYLQSSYALFQYDPLLLNELGVVAF-NKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKL-KMY 532 (597)
T ss_dssp TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHT-TCH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHh-cCH
Confidence 78888888888888888888888888888777 588888888888888888 6665 78888888887764 688
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 487 WAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 487 eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
++|+++|+++++++|+++.++..++.++...|+.+++
T Consensus 533 ~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A 569 (597)
T 2xpi_A 533 DAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLA 569 (597)
T ss_dssp HHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHH
Confidence 8888888888888888888888888888888876543
No 113
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.20 E-value=5.6e-11 Score=109.50 Aligned_cols=109 Identities=14% Similarity=0.125 Sum_probs=95.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHHh-----
Q 009385 414 ADYFRTELLYQTGLAQEPNDP---LLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAE---SFSKYASFLWRV----- 482 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~---eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddae---AL~nLG~~L~e~----- 482 (536)
|++++|+..|+++++.+|+++ .+++++|.+++ ..|++++|+..|+++++.+|+++. +++.+|.++...
T Consensus 18 g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~ 96 (225)
T 2yhc_A 18 GNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYY-KNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSAL 96 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhh
Confidence 899999999999999999874 78999999988 699999999999999999999975 889999887652
Q ss_pred ------------cCCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCCccc
Q 009385 483 ------------RNDLWAAEETFLEAISADPTNSYYA-----------------ANYANFLWNTGGEDTC 523 (536)
Q Consensus 483 ------------~GD~eEAee~feKALeLDPdNpeal-----------------~NyA~~L~elGr~E~c 523 (536)
.|++++|+..|+++++.+|+++.+. ..+|.++...|+++++
T Consensus 97 ~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A 166 (225)
T 2yhc_A 97 QGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAV 166 (225)
T ss_dssp -----------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred hhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 3589999999999999999998654 5778889999987544
No 114
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.20 E-value=2.3e-10 Score=91.40 Aligned_cols=88 Identities=27% Similarity=0.472 Sum_probs=83.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|++++..+|+++.++.++|.++. ..|++++|+.+|+++++.+|++..++..+|.++.. .|++++|+.+|
T Consensus 49 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~ 126 (136)
T 2fo7_A 49 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYDEAIEYY 126 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-HccHHHHHHHH
Confidence 79999999999999999999999999999887 68999999999999999999999999999998876 57999999999
Q ss_pred HHHHHhCCCC
Q 009385 494 LEAISADPTN 503 (536)
Q Consensus 494 eKALeLDPdN 503 (536)
+++++++|++
T Consensus 127 ~~~~~~~~~~ 136 (136)
T 2fo7_A 127 QKALELDPRS 136 (136)
T ss_dssp HHHHHHSTTC
T ss_pred HHHHccCCCC
Confidence 9999999974
No 115
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.20 E-value=1.8e-10 Score=91.63 Aligned_cols=93 Identities=26% Similarity=0.432 Sum_probs=82.5
Q ss_pred hCCCC-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHH
Q 009385 429 QEPND-PLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYA 507 (536)
Q Consensus 429 LdPdn-~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal 507 (536)
.+|.+ ..+++++|.++. ..|++++|+++|+++++.+|++..++..+|.++... |++++|+.+|+++++++|+++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~~~A~~~~~~~~~~~~~~~~~~ 80 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQ-GDYDEAIEYYQKALELDPNNAEAW 80 (125)
T ss_dssp ----CHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCccccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHhCCccHHHH
Confidence 46766 788999998877 699999999999999999999999999999988774 699999999999999999999999
Q ss_pred HHHHHHHHHcCCCccc
Q 009385 508 ANYANFLWNTGGEDTC 523 (536)
Q Consensus 508 ~NyA~~L~elGr~E~c 523 (536)
.++|.++...|+.+++
T Consensus 81 ~~la~~~~~~~~~~~A 96 (125)
T 1na0_A 81 YNLGNAYYKQGDYDEA 96 (125)
T ss_dssp HHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhcCHHHH
Confidence 9999999999987544
No 116
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.19 E-value=5.8e-11 Score=110.42 Aligned_cols=103 Identities=18% Similarity=0.059 Sum_probs=92.6
Q ss_pred CCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHH--------hCCHHHHHHHHHHHHHhCCCCHHHH----------
Q 009385 414 ADYFRTELLYQTGLAQEPND---PLLLANYAQFLYIV--------AHDYDRAEEYFKRAIAVEPPDAESF---------- 472 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn---~eAL~NLA~lL~e~--------~GD~deAEe~FeKALeLDPddaeAL---------- 472 (536)
|++++|+..|+++++++|++ +.+++++|.+++ . .|++++|+.+|+++++.+|++..+.
T Consensus 66 ~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~ 144 (261)
T 3qky_A 66 KEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYY-KLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELR 144 (261)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH-HHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHH-HhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHH
Confidence 89999999999999998865 678999998877 6 8999999999999999999997766
Q ss_pred -------HHHHHHHHHhcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHcC
Q 009385 473 -------SKYASFLWRVRNDLWAAEETFLEAISADPT---NSYYAANYANFLWNTG 518 (536)
Q Consensus 473 -------~nLG~~L~e~~GD~eEAee~feKALeLDPd---Npeal~NyA~~L~elG 518 (536)
+.+|.++... |++++|+.+|+++++..|+ .+.+++++|.++..+|
T Consensus 145 ~~~~~~~~~la~~~~~~-g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g 199 (261)
T 3qky_A 145 AKLARKQYEAARLYERR-ELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYA 199 (261)
T ss_dssp HHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc-cCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhc
Confidence 7889988764 7999999999999999999 4568999999999873
No 117
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.17 E-value=8.8e-11 Score=117.66 Aligned_cols=107 Identities=20% Similarity=0.309 Sum_probs=101.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|+++++++|+ ..++.++|.++. ..|++++|+++|+++++.+|+++.++..+|.++... |++++|+.+|
T Consensus 257 ~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~ 333 (537)
T 3fp2_A 257 NNLLDAQVLLQESINLHPT-PNSYIFLALTLA-DKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFIL-QDYKNAKEDF 333 (537)
T ss_dssp TCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTC-CSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCC-chHHHHHHHHHH-HhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhc-CCHHHHHHHH
Confidence 8999999999999999999 999999999877 689999999999999999999999999999988864 6999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+++++++|+++.++.++|.++...|+.+++
T Consensus 334 ~~a~~~~~~~~~~~~~la~~~~~~g~~~~A 363 (537)
T 3fp2_A 334 QKAQSLNPENVYPYIQLACLLYKQGKFTES 363 (537)
T ss_dssp HHHHHHCTTCSHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999999999999997654
No 118
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=1.4e-10 Score=96.29 Aligned_cols=94 Identities=18% Similarity=0.134 Sum_probs=86.5
Q ss_pred HhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 009385 428 AQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD---AESFSKYASFLWRVRNDLWAAEETFLEAISADPTNS 504 (536)
Q Consensus 428 eLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd---aeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNp 504 (536)
..+|.+...++.+|..++ ..|++++|+++|+++++++|++ ..++.++|.++... |++++|+.+|+++++++|+++
T Consensus 22 ~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~~~~~~~~~~ 99 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELF-KCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKL-EDYDKAETEASKAIEKDGGDV 99 (148)
T ss_dssp CTTCCCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHTSCCH
T ss_pred ccchHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHH-ccHHHHHHHHHHHHhhCccCH
Confidence 457889999999999888 6899999999999999999998 89999999988775 699999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCccc
Q 009385 505 YYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 505 eal~NyA~~L~elGr~E~c 523 (536)
.+++++|.++...|+.+++
T Consensus 100 ~~~~~~a~~~~~~~~~~~A 118 (148)
T 2dba_A 100 KALYRRSQALEKLGRLDQA 118 (148)
T ss_dssp HHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHH
Confidence 9999999999999987544
No 119
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.17 E-value=1.4e-10 Score=94.93 Aligned_cols=89 Identities=16% Similarity=0.225 Sum_probs=75.8
Q ss_pred hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC--CHHH
Q 009385 429 QEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPT--NSYY 506 (536)
Q Consensus 429 LdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPd--Npea 506 (536)
.+|+++.+++++|.+++ ..|++++|+++|+++++++|+++.+++++|.++... |++++|+++|++|++++|+ +...
T Consensus 2 ~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~-g~~~~A~~~~~~al~l~~~~~~~~~ 79 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHL-KHDNASRALALFEELVETDPDYVGTYYHLGKLYERL-DRTDDAIDTYAQGIEVAREEGTQKD 79 (100)
T ss_dssp ---CCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred CCccCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhhhcCCchhH
Confidence 58999999999999888 699999999999999999999999999999988774 7999999999999999874 4566
Q ss_pred HHHHHHHHHHcCC
Q 009385 507 AANYANFLWNTGG 519 (536)
Q Consensus 507 l~NyA~~L~elGr 519 (536)
...+..+|...+.
T Consensus 80 ~~~l~~~l~~~~~ 92 (100)
T 3ma5_A 80 LSELQDAKLKAEG 92 (100)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccc
Confidence 6677777765543
No 120
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.17 E-value=6.2e-12 Score=130.25 Aligned_cols=108 Identities=8% Similarity=0.079 Sum_probs=101.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD---------------AESFSKYASF 478 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd---------------aeAL~nLG~~ 478 (536)
+++++|+..|+++++.+|+++.++.++|..++ ..|+|++|+.+|++||+++|++ ..+++++|.+
T Consensus 248 ~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~-~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~ 326 (457)
T 1kt0_A 248 KSFEKAKESWEMDTKEKLEQAAIVKEKGTVYF-KGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMC 326 (457)
T ss_dssp EEEECCCCGGGSCHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccCcchhhcCHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 57778999999999999999999999999988 6999999999999999999999 7999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 479 LWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 479 L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+... |++++|+.+|++|++++|+++.+++++|.+|..+|+++++
T Consensus 327 ~~~~-g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A 370 (457)
T 1kt0_A 327 YLKL-REYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESA 370 (457)
T ss_dssp HHHT-TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHh-cCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHH
Confidence 8875 6999999999999999999999999999999999987543
No 121
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.17 E-value=6.8e-11 Score=113.63 Aligned_cols=106 Identities=13% Similarity=0.085 Sum_probs=93.8
Q ss_pred CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPND------PLLLANYAQFLYIVA-HDYDRAEEYFKRAIAVEPPD------AESFSKYASFLW 480 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn------~eAL~NLA~lL~e~~-GD~deAEe~FeKALeLDPdd------aeAL~nLG~~L~ 480 (536)
|++++|+.+|++|+++.|.. ..++.++|.++. .. |++++|+.+|++|+++.|++ ..++.++|.++.
T Consensus 91 g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~ 169 (292)
T 1qqe_A 91 GNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILE-NDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKA 169 (292)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Confidence 89999999999999998764 568999998877 65 99999999999999999876 578999999888
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCCHH-------HHHHHHHHHHHcCCCc
Q 009385 481 RVRNDLWAAEETFLEAISADPTNSY-------YAANYANFLWNTGGED 521 (536)
Q Consensus 481 e~~GD~eEAee~feKALeLDPdNpe-------al~NyA~~L~elGr~E 521 (536)
.. |++++|+.+|+++++++|++.. ++.++|.++..+|+.+
T Consensus 170 ~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 216 (292)
T 1qqe_A 170 LD-GQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAV 216 (292)
T ss_dssp HT-TCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHH
T ss_pred Hh-CCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHH
Confidence 75 6999999999999999998764 5789999999999863
No 122
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.16 E-value=1.5e-10 Score=106.73 Aligned_cols=109 Identities=11% Similarity=0.011 Sum_probs=95.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHHH-----------------hCCHHHHHHHHHHHHHhCCCCHHHH-
Q 009385 414 ADYFRTELLYQTGLAQEPNDPL---LLANYAQFLYIV-----------------AHDYDRAEEYFKRAIAVEPPDAESF- 472 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~e---AL~NLA~lL~e~-----------------~GD~deAEe~FeKALeLDPddaeAL- 472 (536)
+++++|+..|+++++.+|+++. +++.+|.+++.. .|++++|+..|+++++.+|+++.+.
T Consensus 55 ~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~ 134 (225)
T 2yhc_A 55 ADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTD 134 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHH
T ss_pred CCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHH
Confidence 8999999999999999999975 788899877631 4789999999999999999998665
Q ss_pred ----------------HHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCCCccc
Q 009385 473 ----------------SKYASFLWRVRNDLWAAEETFLEAISADPTNS---YYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 473 ----------------~nLG~~L~e~~GD~eEAee~feKALeLDPdNp---eal~NyA~~L~elGr~E~c 523 (536)
..+|.++.. .|++++|+..|+++++..|+++ .++..+|.++.++|+.+.+
T Consensus 135 a~~~l~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A 203 (225)
T 2yhc_A 135 ATKRLVFLKDRLAKYEYSVAEYYTE-RGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQA 203 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHH
Confidence 567777776 4699999999999999999997 5699999999999987654
No 123
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.16 E-value=8.8e-11 Score=116.66 Aligned_cols=104 Identities=15% Similarity=0.136 Sum_probs=62.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYI---VAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAE 490 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e---~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAe 490 (536)
+++++|+..|++|++++|+++.++.++|..+.. ..+++++|+++|++++.++|+++.++.++|.++.. .|++++|+
T Consensus 189 ~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~-~~~~~~A~ 267 (472)
T 4g1t_A 189 PPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRR-KDEPDKAI 267 (472)
T ss_dssp CCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred hHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHH-cCchHHHH
Confidence 455556666666666666666666666644331 23456666666666666666666666666666554 34666666
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 009385 491 ETFLEAISADPTNSYYAANYANFLWNTG 518 (536)
Q Consensus 491 e~feKALeLDPdNpeal~NyA~~L~elG 518 (536)
.+|++|++++|+++.++.++|.++...+
T Consensus 268 ~~~~~al~~~p~~~~~~~~lg~~y~~~~ 295 (472)
T 4g1t_A 268 ELLKKALEYIPNNAYLHCQIGCCYRAKV 295 (472)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHH
Confidence 6666666666666666666666665443
No 124
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.15 E-value=1.9e-11 Score=109.70 Aligned_cols=108 Identities=9% Similarity=-0.033 Sum_probs=94.5
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDA----------------ESFSKYAS 477 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdda----------------eAL~nLG~ 477 (536)
+++++|.+.|.......+.....+.++|..++ ..|++++|+.+|++++++.|+++ .++.++|.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~ 96 (198)
T 2fbn_A 18 YFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFF-KKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLAT 96 (198)
T ss_dssp ----CCCSGGGCCHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccCchhhCCHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHH
Confidence 67777777777777777888889999999888 69999999999999999999998 89999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 478 FLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 478 ~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
++... |++++|+.+|++|++++|+++.+++++|.++..+|+++++
T Consensus 97 ~~~~~-~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A 141 (198)
T 2fbn_A 97 CYNKN-KDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEA 141 (198)
T ss_dssp HHHHT-TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHh-cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHH
Confidence 88774 6999999999999999999999999999999999987644
No 125
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.14 E-value=1e-10 Score=115.82 Aligned_cols=109 Identities=19% Similarity=0.228 Sum_probs=95.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHh--cCC
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAE------SFSKYASFLWRV--RND 485 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddae------AL~nLG~~L~e~--~GD 485 (536)
|++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++++|+++. ++..+|.++... .|+
T Consensus 352 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 430 (514)
T 2gw1_A 352 NKFDDCETLFSEAKRKFPEAPEVPNFFAEILT-DKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVEN 430 (514)
T ss_dssp TCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTH
T ss_pred CCHHHHHHHHHHHHHHcccCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCC
Confidence 78999999999999999999999999998877 689999999999999999998865 889999877651 468
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 486 LWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 486 ~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+++|+.+|+++++++|+++.++.++|.++...|+.+++
T Consensus 431 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A 468 (514)
T 2gw1_A 431 FIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEA 468 (514)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999999999999999999999987544
No 126
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.14 E-value=1.9e-10 Score=103.93 Aligned_cols=110 Identities=20% Similarity=0.274 Sum_probs=97.4
Q ss_pred cCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCCCHHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQ--------EPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAV--------EPPDAESFSKYA 476 (536)
Q Consensus 413 ~gdyeeAee~YqKALeL--------dPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeL--------DPddaeAL~nLG 476 (536)
.+++++|+.+|++++.+ +|....++.++|.+++ ..|++++|+.+|++++++ +|....++.++|
T Consensus 98 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la 176 (283)
T 3edt_B 98 RGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQ-NQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLA 176 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 38999999999999999 5778899999999888 699999999999999999 888889999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHh-------------------------------------------------CCCCHHHH
Q 009385 477 SFLWRVRNDLWAAEETFLEAISA-------------------------------------------------DPTNSYYA 507 (536)
Q Consensus 477 ~~L~e~~GD~eEAee~feKALeL-------------------------------------------------DPdNpeal 507 (536)
.++... |++++|+.+|++++++ .|..+.++
T Consensus 177 ~~~~~~-g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (283)
T 3edt_B 177 SCYLKQ-GKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTL 255 (283)
T ss_dssp HHHHHH-TCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHH
T ss_pred HHHHHc-CCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 988875 6999999999999997 24556678
Q ss_pred HHHHHHHHHcCCCcccc
Q 009385 508 ANYANFLWNTGGEDTCF 524 (536)
Q Consensus 508 ~NyA~~L~elGr~E~cl 524 (536)
.++|.++...|+.+++.
T Consensus 256 ~~la~~~~~~g~~~~A~ 272 (283)
T 3edt_B 256 RSLGALYRRQGKLEAAH 272 (283)
T ss_dssp HHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHcCCHHHHH
Confidence 89999999999887654
No 127
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.13 E-value=2e-10 Score=99.87 Aligned_cols=89 Identities=20% Similarity=0.216 Sum_probs=81.4
Q ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 009385 433 DPLLLANYAQFLYIVAHDYDRAEEYFKRAIAV------------------EPPDAESFSKYASFLWRVRNDLWAAEETFL 494 (536)
Q Consensus 433 n~eAL~NLA~lL~e~~GD~deAEe~FeKALeL------------------DPddaeAL~nLG~~L~e~~GD~eEAee~fe 494 (536)
.+..+.+.|..++ ..|++++|+.+|++||++ +|.++.++.++|.++... |++++|+.+|+
T Consensus 10 ~a~~~~~~G~~~~-~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~-~~~~~A~~~~~ 87 (162)
T 3rkv_A 10 SVEALRQKGNELF-VQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNI-GDLHEAEETSS 87 (162)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHH-TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHH
Confidence 3567889999888 699999999999999999 788889999999998875 69999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 495 EAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 495 KALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+|++++|+++.+++++|.++..+|+++.+
T Consensus 88 ~al~~~p~~~~a~~~~g~~~~~~g~~~~A 116 (162)
T 3rkv_A 88 EVLKREETNEKALFRRAKARIAAWKLDEA 116 (162)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHhcCCcchHHHHHHHHHHHHHhcHHHH
Confidence 99999999999999999999999987644
No 128
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.13 E-value=1.8e-10 Score=92.71 Aligned_cols=91 Identities=16% Similarity=0.195 Sum_probs=82.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC-------
Q 009385 431 PNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTN------- 503 (536)
Q Consensus 431 Pdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdN------- 503 (536)
|..+..++++|..++ ..|++++|+.+|+++++.+|+++.++.++|.++... |++++|+.+|+++++++|++
T Consensus 1 ~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~-~~~~~A~~~~~~~~~~~~~~~~~~~~~ 78 (131)
T 1elr_A 1 GKQALKEKELGNDAY-KKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEK-GDYNKCRELCEKAIEVGRENREDYRQI 78 (131)
T ss_dssp CHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred ChHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHh-ccHHHHHHHHHHHHhhccccchhHHHH
Confidence 345678899998887 699999999999999999999999999999988775 69999999999999999988
Q ss_pred HHHHHHHHHHHHHcCCCccc
Q 009385 504 SYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 504 peal~NyA~~L~elGr~E~c 523 (536)
+.++.++|.++...|+.+++
T Consensus 79 ~~~~~~la~~~~~~~~~~~A 98 (131)
T 1elr_A 79 AKAYARIGNSYFKEEKYKDA 98 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhccHHHH
Confidence 89999999999999987544
No 129
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.12 E-value=8.3e-11 Score=113.04 Aligned_cols=110 Identities=9% Similarity=-0.091 Sum_probs=94.8
Q ss_pred CCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPN------DPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD------AESFSKYASFLWR 481 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPd------n~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd------aeAL~nLG~~L~e 481 (536)
|++++|+.+|++|+++.+. .+.++.++|.++. ..|++++|+.+|++|+++.|.. +.++.++|.++..
T Consensus 51 g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~-~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~ 129 (292)
T 1qqe_A 51 KELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFK-SGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILEN 129 (292)
T ss_dssp TCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999542 2678999998877 6999999999999999998865 5689999998876
Q ss_pred hcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCCcccc
Q 009385 482 VRNDLWAAEETFLEAISADPTN------SYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 482 ~~GD~eEAee~feKALeLDPdN------peal~NyA~~L~elGr~E~cl 524 (536)
..|++++|+.+|++|+++.|++ ..++.++|.++..+|+++++.
T Consensus 130 ~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~ 178 (292)
T 1qqe_A 130 DLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEAS 178 (292)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 3269999999999999998865 567889999999999986554
No 130
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.11 E-value=5.5e-10 Score=94.34 Aligned_cols=89 Identities=19% Similarity=0.114 Sum_probs=81.8
Q ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009385 433 DPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYAN 512 (536)
Q Consensus 433 n~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~ 512 (536)
.+..+.++|..++ ..|++++|+.+|+++++++|+++.++.++|.++... |++++|+.+|+++++++|+++.++.++|.
T Consensus 12 ~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~a~~~~~~~~~~~~~~a~ 89 (166)
T 1a17_A 12 RAEELKTQANDYF-KAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRT-ECYGYALGDATRAIELDKKYIKGYYRRAA 89 (166)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 3577888998887 699999999999999999999999999999988764 69999999999999999999999999999
Q ss_pred HHHHcCCCccc
Q 009385 513 FLWNTGGEDTC 523 (536)
Q Consensus 513 ~L~elGr~E~c 523 (536)
++...|+.+++
T Consensus 90 ~~~~~~~~~~A 100 (166)
T 1a17_A 90 SNMALGKFRAA 100 (166)
T ss_dssp HHHHTTCHHHH
T ss_pred HHHHhccHHHH
Confidence 99999987654
No 131
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.11 E-value=2.8e-10 Score=109.70 Aligned_cols=91 Identities=16% Similarity=0.125 Sum_probs=85.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 009385 431 PNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANY 510 (536)
Q Consensus 431 Pdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~Ny 510 (536)
|+++.++.++|..++ ..|++++|+.+|++|++++|+++.+++++|.++... |++++|+.+|++|++++|+++.+++++
T Consensus 1 p~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~-~~~~~A~~~~~~al~~~p~~~~~~~~l 78 (281)
T 2c2l_A 1 SPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKM-QQPEQALADCRRALELDGQSVKAHFFL 78 (281)
T ss_dssp CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHTTSCTTCHHHHHHH
T ss_pred ChhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 678899999999888 699999999999999999999999999999988875 699999999999999999999999999
Q ss_pred HHHHHHcCCCccc
Q 009385 511 ANFLWNTGGEDTC 523 (536)
Q Consensus 511 A~~L~elGr~E~c 523 (536)
|.++..+|+.+++
T Consensus 79 g~~~~~~g~~~~A 91 (281)
T 2c2l_A 79 GQCQLEMESYDEA 91 (281)
T ss_dssp HHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHH
Confidence 9999999987654
No 132
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.10 E-value=3.7e-10 Score=92.69 Aligned_cols=87 Identities=16% Similarity=0.142 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC---HHHHH
Q 009385 435 LLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDA---ESFSKYASFLWRVRNDLWAAEETFLEAISADPTN---SYYAA 508 (536)
Q Consensus 435 eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdda---eAL~nLG~~L~e~~GD~eEAee~feKALeLDPdN---peal~ 508 (536)
.+++++|..++ ..|++++|+.+|+++++.+|+++ .+++.+|.++... |++++|+.+|+++++.+|++ +.+++
T Consensus 3 ~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~-~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (129)
T 2xev_A 3 RTAYNVAFDAL-KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYAT-RNFQLAEAQFRDLVSRYPTHDKAAGGLL 80 (129)
T ss_dssp CCHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTSTTHHHHHH
T ss_pred HHHHHHHHHHH-HhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHCCCCcccHHHHH
Confidence 35778898887 69999999999999999999999 8999999988875 69999999999999999999 88999
Q ss_pred HHHHHHHHcCCCccc
Q 009385 509 NYANFLWNTGGEDTC 523 (536)
Q Consensus 509 NyA~~L~elGr~E~c 523 (536)
++|.++..+|+.+++
T Consensus 81 ~la~~~~~~g~~~~A 95 (129)
T 2xev_A 81 KLGLSQYGEGKNTEA 95 (129)
T ss_dssp HHHHHHHHTTCHHHH
T ss_pred HHHHHHHHcCCHHHH
Confidence 999999999987644
No 133
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.10 E-value=9.5e-11 Score=93.34 Aligned_cols=81 Identities=11% Similarity=0.071 Sum_probs=49.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPL-LLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~e-AL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
+++++|+.+|+++++.+|+++. +++++|.+++ ..|++++|+++|+++++++|+++.++.+ +.+.+|+.+
T Consensus 14 ~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~---------~~~~~a~~~ 83 (99)
T 2kc7_A 14 GDIENALQALEEFLQTEPVGKDEAYYLMGNAYR-KLGDWQKALNNYQSAIELNPDSPALQAR---------KMVMDILNF 83 (99)
T ss_dssp TCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTSTHHHHH---------HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCcHHHHHH---------HHHHHHHHH
Confidence 5666666666666666666666 6666666555 4566666666666666666666665432 135566666
Q ss_pred HHHHHHhCCCCH
Q 009385 493 FLEAISADPTNS 504 (536)
Q Consensus 493 feKALeLDPdNp 504 (536)
|++++..+|+++
T Consensus 84 ~~~~~~~~p~~~ 95 (99)
T 2kc7_A 84 YNKDMYNQLEHH 95 (99)
T ss_dssp HCCTTHHHHCCS
T ss_pred HHHHhccCcccc
Confidence 666666666543
No 134
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.09 E-value=8.3e-11 Score=116.52 Aligned_cols=108 Identities=19% Similarity=0.290 Sum_probs=90.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|+.+|++++..+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .|++++|+.+|
T Consensus 284 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 361 (514)
T 2gw1_A 284 NDSTEYYNYFDKALKLDSNNSSVYYHRGQMNF-ILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYR-ENKFDDCETLF 361 (514)
T ss_dssp SCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHH-HTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTT-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 77888888888888888888888888888777 58888888888888888888888888888887765 46888888888
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+++++.+|+++.++.++|.++...|+.+++
T Consensus 362 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 391 (514)
T 2gw1_A 362 SEAKRKFPEAPEVPNFFAEILTDKNDFDKA 391 (514)
T ss_dssp HHHHHHSTTCSHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHcccCHHHHHHHHHHHHHCCCHHHH
Confidence 888888888888888888888888876544
No 135
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.08 E-value=3.7e-10 Score=105.00 Aligned_cols=89 Identities=20% Similarity=0.127 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHhcCCHHHHHHHHHHHHHh--
Q 009385 434 PLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPP-------DAE-----SFSKYASFLWRVRNDLWAAEETFLEAISA-- 499 (536)
Q Consensus 434 ~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPd-------dae-----AL~nLG~~L~e~~GD~eEAee~feKALeL-- 499 (536)
...+.+.|..++ ..|+|++|+.+|++||+++|+ +.. +|.++|.++... |++++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~-~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~L-gr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 11 AYLALSDAQRQL-VAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGL-RSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHhhh
Confidence 567888999888 689999999999999999999 544 999999999876 6999999999999999
Q ss_pred -----CCCCHHHH----HHHHHHHHHcCCCcccc
Q 009385 500 -----DPTNSYYA----ANYANFLWNTGGEDTCF 524 (536)
Q Consensus 500 -----DPdNpeal----~NyA~~L~elGr~E~cl 524 (536)
+|+++.++ ++.|.+|..+|++++++
T Consensus 89 ~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl 122 (159)
T 2hr2_A 89 RRGELNQDEGKLWISAVYSRALALDGLGRGAEAM 122 (159)
T ss_dssp HHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred ccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHH
Confidence 99999999 99999999999986543
No 136
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.08 E-value=1.4e-09 Score=101.25 Aligned_cols=105 Identities=11% Similarity=0.110 Sum_probs=84.2
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh---cCC
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIV----AHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRV---RND 485 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~----~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~---~GD 485 (536)
.+++++|+.+|++|++++ ++.+++++|.++. . .+++++|+++|++|++. +++.+++++|.++... .++
T Consensus 55 ~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~-~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~ 129 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN--YSNGCHLLGNLYY-SGQGVSQNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRD 129 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCC
T ss_pred CCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHh-CCCCcccCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccC
Confidence 578888888888888875 7888888887766 6 78888888888888887 4888888888877650 358
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCCcccc
Q 009385 486 LWAAEETFLEAISADPTNSYYAANYANFLWN----TGGEDTCF 524 (536)
Q Consensus 486 ~eEAee~feKALeLDPdNpeal~NyA~~L~e----lGr~E~cl 524 (536)
+++|+.+|++|++++ ++.++.++|.++.. .++.++++
T Consensus 130 ~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~ 170 (273)
T 1ouv_A 130 FKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKAL 170 (273)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHH
T ss_pred HHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHH
Confidence 888998998888876 57788888888887 66665544
No 137
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.05 E-value=1.4e-09 Score=103.79 Aligned_cols=108 Identities=12% Similarity=-0.011 Sum_probs=93.7
Q ss_pred CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhCCHHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPND------PLLLANYAQFLYIVAHDYDRAEEYFKRAI---AVEPPDA----ESFSKYASFLW 480 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn------~eAL~NLA~lL~e~~GD~deAEe~FeKAL---eLDPdda----eAL~nLG~~L~ 480 (536)
+++++|+.+|++|+++.+.. ..+++++|.++. ..|++++|+.+|++|+ +..|++. .+++++|.++.
T Consensus 129 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~ 207 (293)
T 2qfc_A 129 VDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY 207 (293)
T ss_dssp SCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHH
Confidence 79999999999999876654 668999998887 6999999999999999 5677754 68999999888
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCCccc
Q 009385 481 RVRNDLWAAEETFLEAISADPTN------SYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 481 e~~GD~eEAee~feKALeLDPdN------peal~NyA~~L~elGr~E~c 523 (536)
.. |++++|+.+|++|+++.++. +.++.++|.++..+|+.+++
T Consensus 208 ~~-~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 255 (293)
T 2qfc_A 208 LD-SRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HT-TCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHH
T ss_pred HH-hhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 75 69999999999999986541 67899999999999998765
No 138
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.01 E-value=9.6e-10 Score=113.55 Aligned_cols=108 Identities=19% Similarity=0.231 Sum_probs=95.9
Q ss_pred cCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDP-LLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEE 491 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~-eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee 491 (536)
.|++++|...|+++++++|+++ .+|.+++.++. ..|++++|.++|++|++..|.+...+...+.+.+...|++++|..
T Consensus 334 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~ 412 (530)
T 2ooe_A 334 RMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFK 412 (530)
T ss_dssp TTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHH
T ss_pred cCCHHHHHHHHHHHhCccccCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHH
Confidence 4899999999999999999996 69999998877 589999999999999999999888887777665545679999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009385 492 TFLEAISADPTNSYYAANYANFLWNTGGED 521 (536)
Q Consensus 492 ~feKALeLDPdNpeal~NyA~~L~elGr~E 521 (536)
+|++|++.+|+++.++.+|+.++...|+.+
T Consensus 413 ~~e~al~~~p~~~~~~~~~~~~~~~~g~~~ 442 (530)
T 2ooe_A 413 IFELGLKKYGDIPEYVLAYIDYLSHLNEDN 442 (530)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHhCCCHh
Confidence 999999999999999999999999999764
No 139
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.01 E-value=2.9e-10 Score=104.75 Aligned_cols=109 Identities=22% Similarity=0.232 Sum_probs=96.9
Q ss_pred CCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQ--------EPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVE--------PPDAESFSKYAS 477 (536)
Q Consensus 414 gdyeeAee~YqKALeL--------dPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLD--------PddaeAL~nLG~ 477 (536)
+++++|+.+|++++.+ +|....++.++|.++. ..|++++|+.+|++++++. |....++.++|.
T Consensus 83 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~ 161 (311)
T 3nf1_A 83 NKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLAL 161 (311)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-HcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Confidence 8999999999999998 4667789999999887 6999999999999999984 667788999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCCcccc
Q 009385 478 FLWRVRNDLWAAEETFLEAISA--------DPTNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 478 ~L~e~~GD~eEAee~feKALeL--------DPdNpeal~NyA~~L~elGr~E~cl 524 (536)
++.. .|++++|+.+|++++++ +|..+.++.++|.++...|+.+++.
T Consensus 162 ~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 215 (311)
T 3nf1_A 162 LCQN-QGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAE 215 (311)
T ss_dssp HHHT-TTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHH-cCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 8876 47999999999999999 7777888999999999999876543
No 140
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.01 E-value=4.6e-10 Score=92.49 Aligned_cols=109 Identities=13% Similarity=0.136 Sum_probs=91.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDP------LLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD------AESFSKYASFLWR 481 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~------eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd------aeAL~nLG~~L~e 481 (536)
+++++|+.+|++++++.+... .++.++|.++. ..|++++|+++|++++++.+.. ..++.++|.++..
T Consensus 23 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~ 101 (164)
T 3ro3_A 23 GNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL 101 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 799999999999999876433 48889998887 6999999999999999987654 6789999998877
Q ss_pred hcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCCcccc
Q 009385 482 VRNDLWAAEETFLEAISADPTN------SYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 482 ~~GD~eEAee~feKALeLDPdN------peal~NyA~~L~elGr~E~cl 524 (536)
. |++++|+.+|++++++.+.. +.++.++|.++...|+.+++.
T Consensus 102 ~-~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 149 (164)
T 3ro3_A 102 L-QDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAM 149 (164)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred H-hhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHH
Confidence 4 69999999999999874322 456889999999999876543
No 141
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.00 E-value=4e-10 Score=103.81 Aligned_cols=110 Identities=22% Similarity=0.301 Sum_probs=97.2
Q ss_pred cCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCCCHHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQE--------PNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAV--------EPPDAESFSKYA 476 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLd--------Pdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeL--------DPddaeAL~nLG 476 (536)
.+++++|+.+|++++++. |....++.++|.++. ..|++++|+++|++++++ +|....++..+|
T Consensus 124 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la 202 (311)
T 3nf1_A 124 RGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQ-NQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLA 202 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 389999999999999984 667788999999887 689999999999999999 888889999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHh-------------------------------------------------CCCCHHHH
Q 009385 477 SFLWRVRNDLWAAEETFLEAISA-------------------------------------------------DPTNSYYA 507 (536)
Q Consensus 477 ~~L~e~~GD~eEAee~feKALeL-------------------------------------------------DPdNpeal 507 (536)
.++... |++++|+.+|++++++ +|.++.++
T Consensus 203 ~~~~~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 281 (311)
T 3nf1_A 203 SCYLKQ-GKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTL 281 (311)
T ss_dssp HHHHHH-TCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHH
T ss_pred HHHHHc-CCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHH
Confidence 988875 6999999999999985 46677789
Q ss_pred HHHHHHHHHcCCCcccc
Q 009385 508 ANYANFLWNTGGEDTCF 524 (536)
Q Consensus 508 ~NyA~~L~elGr~E~cl 524 (536)
.++|.++...|+.+++.
T Consensus 282 ~~la~~~~~~g~~~~A~ 298 (311)
T 3nf1_A 282 KNLGALYRRQGKFEAAE 298 (311)
T ss_dssp HHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHCCCHHHHH
Confidence 99999999999876654
No 142
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.00 E-value=4.3e-09 Score=97.88 Aligned_cols=105 Identities=17% Similarity=0.139 Sum_probs=92.1
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh---cCC
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIV----AHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRV---RND 485 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~----~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~---~GD 485 (536)
.+++++|+.+|++|++.+ ++.+++++|.++. . .+++++|+++|++|++.+ ++.++.++|.++... .++
T Consensus 91 ~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~-~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~ 165 (273)
T 1ouv_A 91 SQNTNKALQYYSKACDLK--YAEGCASLGGIYH-DGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKD 165 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCC
T ss_pred ccCHHHHHHHHHHHHHcC--CccHHHHHHHHHH-cCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCC
Confidence 689999999999999984 8999999998877 6 899999999999999976 789999999987751 469
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCCcccc
Q 009385 486 LWAAEETFLEAISADPTNSYYAANYANFLWN----TGGEDTCF 524 (536)
Q Consensus 486 ~eEAee~feKALeLDPdNpeal~NyA~~L~e----lGr~E~cl 524 (536)
+++|+.+|++|++. +++.++.++|.++.. .++.++++
T Consensus 166 ~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~g~~~~~~~~~A~ 206 (273)
T 1ouv_A 166 LKKALASYDKACDL--KDSPGCFNAGNMYHHGEGATKNFKEAL 206 (273)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTCSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 99999999999987 468899999999999 88776654
No 143
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.00 E-value=2.3e-10 Score=91.24 Aligned_cols=80 Identities=14% Similarity=0.110 Sum_probs=71.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHhcCCHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD------AESFSKYASFLWRVRNDLW 487 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd------aeAL~nLG~~L~e~~GD~e 487 (536)
+++++|+.+|++|++++|+++.+++++|.++. ..|++++|+++|+++++++|++ ..++..+|.++... |+++
T Consensus 18 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~ 95 (111)
T 2l6j_A 18 GLYREAVHCYDQLITAQPQNPVGYSNKAMALI-KLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAV-GSVQ 95 (111)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHH-HCCC
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHH-HhHh
Confidence 89999999999999999999999999999888 6999999999999999999999 89999999887765 4777
Q ss_pred HHHHHHHH
Q 009385 488 AAEETFLE 495 (536)
Q Consensus 488 EAee~feK 495 (536)
+|+..|++
T Consensus 96 ~a~~~~~~ 103 (111)
T 2l6j_A 96 IPVVEVDE 103 (111)
T ss_dssp CCSSSSSS
T ss_pred hhHhHHHH
Confidence 77665544
No 144
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.00 E-value=4.5e-10 Score=109.19 Aligned_cols=104 Identities=14% Similarity=0.180 Sum_probs=95.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhc
Q 009385 414 ADYFRTELLYQTGLAQEPNDP----LLLANYAQFLYIVAHDYDRAEEYFKRAIAV------EPPDAESFSKYASFLWRVR 483 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~----eAL~NLA~lL~e~~GD~deAEe~FeKALeL------DPddaeAL~nLG~~L~e~~ 483 (536)
|++++|+.+|+++++++|+++ .++.++|.+++ ..|++++|+.+|++++++ +|..+.++.++|.++...
T Consensus 62 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~- 139 (411)
T 4a1s_A 62 GDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVM- 139 (411)
T ss_dssp TCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-
T ss_pred CcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHC-
Confidence 899999999999999999998 58889998888 689999999999999999 788899999999988764
Q ss_pred CCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCC
Q 009385 484 NDLWAAEETFLEAISA------DPTNSYYAANYANFLWNTGG 519 (536)
Q Consensus 484 GD~eEAee~feKALeL------DPdNpeal~NyA~~L~elGr 519 (536)
|++++|+.+|++|+++ .|....++.++|.++...|+
T Consensus 140 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 140 GRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 7999999999999999 67777789999999999998
No 145
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.98 E-value=4.7e-09 Score=83.44 Aligned_cols=86 Identities=13% Similarity=0.097 Sum_probs=72.9
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHH--HHHHHHH
Q 009385 438 ANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAE-SFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYA--ANYANFL 514 (536)
Q Consensus 438 ~NLA~lL~e~~GD~deAEe~FeKALeLDPddae-AL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal--~NyA~~L 514 (536)
++.|..+. ..|++++|+++|+++++.+|+++. +++++|.++... |++++|+++|++|++++|+++.++ ..++.++
T Consensus 4 ~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~-~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~ 81 (99)
T 2kc7_A 4 LKTIKELI-NQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKL-GDWQKALNNYQSAIELNPDSPALQARKMVMDIL 81 (99)
T ss_dssp HHHHHHHH-HHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHH
T ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 56787777 689999999999999999999999 999999988875 699999999999999999999987 6677766
Q ss_pred HHcCCCccccC
Q 009385 515 WNTGGEDTCFP 525 (536)
Q Consensus 515 ~elGr~E~clp 525 (536)
....+....-|
T Consensus 82 ~~~~~~~~~~p 92 (99)
T 2kc7_A 82 NFYNKDMYNQL 92 (99)
T ss_dssp HHHCCTTHHHH
T ss_pred HHHHHHhccCc
Confidence 66555444333
No 146
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.97 E-value=9e-10 Score=105.14 Aligned_cols=107 Identities=14% Similarity=0.001 Sum_probs=90.0
Q ss_pred CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPND------PLLLANYAQFLYIVAHDYDRAEEYFKRAIAV-------EPPDAESFSKYASFLW 480 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn------~eAL~NLA~lL~e~~GD~deAEe~FeKALeL-------DPddaeAL~nLG~~L~ 480 (536)
+++++|+.+|++|+.+.+.. ..++.++|.++. ..|++++|+.+|++|++. .+..+.+++++|.++.
T Consensus 129 ~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~ 207 (293)
T 3u3w_A 129 VDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY 207 (293)
T ss_dssp SCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 79999999999999975443 347999998887 699999999999999952 2333568999999988
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCC-cc
Q 009385 481 RVRNDLWAAEETFLEAISADPTN------SYYAANYANFLWNTGGE-DT 522 (536)
Q Consensus 481 e~~GD~eEAee~feKALeLDPdN------peal~NyA~~L~elGr~-E~ 522 (536)
.. |++++|+.+|++|+++.+.. +.++.++|.++..+|+. ++
T Consensus 208 ~~-~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~ 255 (293)
T 3u3w_A 208 LD-SRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HT-TCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred HH-hHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 75 69999999999999987655 77899999999999953 44
No 147
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.97 E-value=1.8e-10 Score=95.70 Aligned_cols=76 Identities=21% Similarity=0.242 Sum_probs=67.2
Q ss_pred hCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcccc
Q 009385 448 AHDYDRAEEYFKRAIAV---EPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 448 ~GD~deAEe~FeKALeL---DPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~cl 524 (536)
.|++++|+.+|++++++ +|+++.++.++|.++... |++++|+.+|++|++++|+++.++.++|.++..+|+.+++.
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~-~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTL-GEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 68999999999999999 699999999999988875 69999999999999999999999999999999999976543
No 148
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.95 E-value=6.3e-09 Score=80.24 Aligned_cols=67 Identities=28% Similarity=0.463 Sum_probs=63.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWR 481 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e 481 (536)
+++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++..
T Consensus 23 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 89 (91)
T 1na3_A 23 GDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 89 (91)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 79999999999999999999999999999888 69999999999999999999999999999987764
No 149
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.95 E-value=1.2e-09 Score=107.21 Aligned_cols=108 Identities=11% Similarity=0.046 Sum_probs=74.8
Q ss_pred CCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPND-------PLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDA------ESFSKYASFLW 480 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn-------~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdda------eAL~nLG~~L~ 480 (536)
|++++|+.+|++|+++.+.. ..++.++|.++. ..|++++|+++|++|+++.|... .++.++|.++.
T Consensus 157 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 235 (383)
T 3ulq_A 157 KQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFL-DLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKN 235 (383)
T ss_dssp TCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 67777777777777774333 346777776666 57777777777777777754332 46777777666
Q ss_pred HhcCCHHHHHHHHHHHHH-----hC-CCCHHHHHHHHHHHHHcCCCccc
Q 009385 481 RVRNDLWAAEETFLEAIS-----AD-PTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 481 e~~GD~eEAee~feKALe-----LD-PdNpeal~NyA~~L~elGr~E~c 523 (536)
.. |++++|+.+|++|++ .+ |..+.++.++|.++..+|+.+++
T Consensus 236 ~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 283 (383)
T 3ulq_A 236 SQ-SQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKA 283 (383)
T ss_dssp HT-TCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHH
T ss_pred HC-CCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHH
Confidence 53 577777777777777 45 66677777777777777776543
No 150
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.94 E-value=4.3e-09 Score=101.48 Aligned_cols=94 Identities=20% Similarity=0.202 Sum_probs=81.9
Q ss_pred hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHH------------------
Q 009385 429 QEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAE------------------ 490 (536)
Q Consensus 429 LdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAe------------------ 490 (536)
.-|++...++.+|..+. ..|++++|+..|+++++++|+++.+++++|.++... |++++|+
T Consensus 112 ~lp~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~-g~~~~A~~~l~~~~~~~p~~~~~~~ 189 (287)
T 3qou_A 112 VLPREEELXAQQAMQLM-QESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIAL-NRSEDAEAVLXTIPLQDQDTRYQGL 189 (287)
T ss_dssp HSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHT-TCHHHHHHHHTTSCGGGCSHHHHHH
T ss_pred HcCCchhhHHHHHHHHH-hCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHC-CCHHHHHHHHHhCchhhcchHHHHH
Confidence 34999999999999887 699999999999999999999999999999988764 5777765
Q ss_pred ----------------HHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcccc
Q 009385 491 ----------------ETFLEAISADPTNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 491 ----------------e~feKALeLDPdNpeal~NyA~~L~elGr~E~cl 524 (536)
+.|++|++++|+++.+++++|.+|...|+.+++.
T Consensus 190 ~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~ 239 (287)
T 3qou_A 190 VAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEAL 239 (287)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHH
Confidence 4566668889999999999999999999876543
No 151
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.93 E-value=2.9e-09 Score=98.04 Aligned_cols=100 Identities=16% Similarity=0.041 Sum_probs=87.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHh---cC
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIV----AHDYDRAEEYFKRAIAVEP--PDAESFSKYASFLWRV---RN 484 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~----~GD~deAEe~FeKALeLDP--ddaeAL~nLG~~L~e~---~G 484 (536)
.++++|+.+|++|++ ++++.+++++|.++. . .+|+++|+++|++|++.+| +++.++++||.++... .+
T Consensus 67 ~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~-~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~ 143 (212)
T 3rjv_A 67 ADYPQARQLAEKAVE--AGSKSGEIVLARVLV-NRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPE 143 (212)
T ss_dssp CCHHHHHHHHHHHHH--TTCHHHHHHHHHHHT-CGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSC
T ss_pred CCHHHHHHHHHHHHH--CCCHHHHHHHHHHHH-cCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCC
Confidence 489999999999964 689999999998765 4 6799999999999999998 4699999999988761 35
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 009385 485 DLWAAEETFLEAISADPTNSYYAANYANFLWNT 517 (536)
Q Consensus 485 D~eEAee~feKALeLDPdNpeal~NyA~~L~el 517 (536)
++++|+.+|++|+++ |+++.+++++|.+|..-
T Consensus 144 d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g 175 (212)
T 3rjv_A 144 DDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQG 175 (212)
T ss_dssp CHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcC
Confidence 899999999999998 78888999999988764
No 152
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.93 E-value=1e-09 Score=100.70 Aligned_cols=107 Identities=13% Similarity=0.140 Sum_probs=93.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhc
Q 009385 414 ADYFRTELLYQTGLAQEPNDP----LLLANYAQFLYIVAHDYDRAEEYFKRAIAV------EPPDAESFSKYASFLWRVR 483 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~----eAL~NLA~lL~e~~GD~deAEe~FeKALeL------DPddaeAL~nLG~~L~e~~ 483 (536)
|++++|+.+|+++++.+|+++ .++.++|.+++ ..|++++|+.+|++++++ .|..+.++..+|.++.. .
T Consensus 19 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~ 96 (338)
T 3ro2_A 19 GDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKV-L 96 (338)
T ss_dssp TCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-T
T ss_pred ccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHH-c
Confidence 899999999999999999994 67889998887 699999999999999998 66778899999998876 4
Q ss_pred CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCCcc
Q 009385 484 NDLWAAEETFLEAISADPTN------SYYAANYANFLWNTGGEDT 522 (536)
Q Consensus 484 GD~eEAee~feKALeLDPdN------peal~NyA~~L~elGr~E~ 522 (536)
|++++|+.+|++|+++.|.. ..++.++|.++...|+.+.
T Consensus 97 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 141 (338)
T 3ro2_A 97 GNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFG 141 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred cCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccc
Confidence 79999999999999987654 3378899999999998433
No 153
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.93 E-value=1.2e-08 Score=109.86 Aligned_cols=149 Identities=13% Similarity=0.016 Sum_probs=116.5
Q ss_pred hHHHHHHHHHHHHHHhccccccccccHHHHHHhcCccccccCcccc-------------CC----------HHHHHHHHH
Q 009385 368 REEELNLWNSIVDEASQMQVTDESLDHETMERFVSPVTANIEADDY-------------AD----------YFRTELLYQ 424 (536)
Q Consensus 368 ~e~EvaLwnsmvaEA~~mQ~~d~~lD~ea~krlvspV~AeLepDd~-------------gd----------yeeAee~Yq 424 (536)
.+..+..|...++..-...+ ....+.++++-+...+ ++.|++| ++ +++|+.+|.
T Consensus 21 ~~~k~~~y~~~~~~~~~~~~-~~~~~eeal~~~~~~l--~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~ 97 (567)
T 1dce_A 21 REQKLKLYQSATQAVFQKRQ-AGELDESVLELTSQIL--GANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLE 97 (567)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-TTCCSHHHHHHHHHHH--HHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCCCCHHHHHHHHHHH--HHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHH
Confidence 45566667665544333222 3356667666544444 4455433 34 899999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 009385 425 TGLAQEPNDPLLLANYAQFLYIVAH--DYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPT 502 (536)
Q Consensus 425 KALeLdPdn~eAL~NLA~lL~e~~G--D~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPd 502 (536)
++|+.+|++..+|++.+.++. ..+ ++++|.+++++++++||.|..+|+..+.++...+..+++|+++++++++.+|.
T Consensus 98 ~~l~~~pK~y~aW~hR~w~l~-~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~ 176 (567)
T 1dce_A 98 SCLRVNPKSYGTWHHRCWLLS-RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS 176 (567)
T ss_dssp HHHHHCTTCHHHHHHHHHHHH-TCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCC
T ss_pred HHHHhCCCCHHHHHHHHHHHH-HcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCC
Confidence 999999999999999998877 578 77999999999999999999999999988877543899999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCC
Q 009385 503 NSYYAANYANFLWNTGGE 520 (536)
Q Consensus 503 Npeal~NyA~~L~elGr~ 520 (536)
|..++++.+.++..+++.
T Consensus 177 n~saW~~r~~ll~~l~~~ 194 (567)
T 1dce_A 177 NYSSWHYRSCLLPQLHPQ 194 (567)
T ss_dssp CHHHHHHHHHHHHHHSCC
T ss_pred CccHHHHHHHHHHhhccc
Confidence 999999999999887543
No 154
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.93 E-value=1.3e-09 Score=95.43 Aligned_cols=108 Identities=11% Similarity=0.103 Sum_probs=90.5
Q ss_pred CCHHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh---CCCC----HHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLA------QEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAV---EPPD----AESFSKYASFLW 480 (536)
Q Consensus 414 gdyeeAee~YqKALe------LdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeL---DPdd----aeAL~nLG~~L~ 480 (536)
|++++|+.+|++++. ..|....++.++|.++. ..|++++|+++|++++++ .+++ +.++.++|.++.
T Consensus 40 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 118 (203)
T 3gw4_A 40 DRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVER-MAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVAL 118 (203)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence 899999999999999 56667789999998887 699999999999999999 4533 567899999888
Q ss_pred HhcCCHHHHHHHHHHHHHhCC--CCHH----HHHHHHHHHHHcCCCccc
Q 009385 481 RVRNDLWAAEETFLEAISADP--TNSY----YAANYANFLWNTGGEDTC 523 (536)
Q Consensus 481 e~~GD~eEAee~feKALeLDP--dNpe----al~NyA~~L~elGr~E~c 523 (536)
.. |++++|+.+|++|+++.+ +++. ++.++|.++...|+.+++
T Consensus 119 ~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 166 (203)
T 3gw4_A 119 HF-GDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEA 166 (203)
T ss_dssp HH-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred Hh-CCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHH
Confidence 75 699999999999998643 3332 368999999999987654
No 155
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.92 E-value=1.7e-09 Score=99.60 Aligned_cols=97 Identities=22% Similarity=0.135 Sum_probs=86.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---hcCCH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAH----DYDRAEEYFKRAIAVEPPDAESFSKYASFLWR---VRNDL 486 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~G----D~deAEe~FeKALeLDPddaeAL~nLG~~L~e---~~GD~ 486 (536)
+++++|+.+|++|++. +++.+++++|.++. . + |+++|+++|++|+ +++++.++++||.++.. ..+++
T Consensus 32 ~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~-~-~g~~~~~~~A~~~~~~A~--~~g~~~a~~~Lg~~y~~g~g~~~d~ 105 (212)
T 3rjv_A 32 GDYQKAEYWAQKAAAQ--GDGDALALLAQLKI-R-NPQQADYPQARQLAEKAV--EAGSKSGEIVLARVLVNRQAGATDV 105 (212)
T ss_dssp TCHHHHHHHHHHHHHT--TCHHHHHHHHHHTT-S-STTSCCHHHHHHHHHHHH--HTTCHHHHHHHHHHHTCGGGSSCCH
T ss_pred CCHHHHHHHHHHHHHc--CCHHHHHHHHHHHH-c-CCCCCCHHHHHHHHHHHH--HCCCHHHHHHHHHHHHcCCCCccCH
Confidence 7999999999999875 68999999998876 3 6 9999999999995 57899999999987764 13599
Q ss_pred HHHHHHHHHHHHhCC--CCHHHHHHHHHHHHH
Q 009385 487 WAAEETFLEAISADP--TNSYYAANYANFLWN 516 (536)
Q Consensus 487 eEAee~feKALeLDP--dNpeal~NyA~~L~e 516 (536)
++|+.+|++|++..| +++.+++++|.+|..
T Consensus 106 ~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 106 AHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 999999999999988 468999999999988
No 156
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.90 E-value=3.6e-09 Score=109.24 Aligned_cols=92 Identities=18% Similarity=0.290 Sum_probs=46.6
Q ss_pred HHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHhcCCHHHHHHHHHH
Q 009385 418 RTELLYQTGLA-QEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDA-ESFSKYASFLWRVRNDLWAAEETFLE 495 (536)
Q Consensus 418 eAee~YqKALe-LdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdda-eAL~nLG~~L~e~~GD~eEAee~feK 495 (536)
+|...|++|++ ++|++..+|.+||.++. ..|++++|...|+++++++|+++ .+|.++|.++... |++++|+++|++
T Consensus 304 ~A~~~~~~Al~~~~p~~~~l~~~~~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~ 381 (530)
T 2ooe_A 304 EAANIYERAISTLLKKNMLLYFAYADYEE-SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRA-EGIKSGRMIFKK 381 (530)
T ss_dssp HHHHHHHHHTTTTCSSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHH-hcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHh-cCHHHHHHHHHH
Confidence 45555555554 45555555555554443 34555555555555555555553 3555555544432 345555555555
Q ss_pred HHHhCCCCHHHHHHHH
Q 009385 496 AISADPTNSYYAANYA 511 (536)
Q Consensus 496 ALeLDPdNpeal~NyA 511 (536)
|++..|.+...+...+
T Consensus 382 Al~~~~~~~~~~~~~a 397 (530)
T 2ooe_A 382 AREDARTRHHVYVTAA 397 (530)
T ss_dssp HHTCTTCCTHHHHHHH
T ss_pred HHhccCCchHHHHHHH
Confidence 5555554444433333
No 157
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.90 E-value=1.1e-09 Score=107.44 Aligned_cols=109 Identities=10% Similarity=0.104 Sum_probs=92.9
Q ss_pred CCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQ------EPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD-------AESFSKYASFLW 480 (536)
Q Consensus 414 gdyeeAee~YqKALeL------dPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd-------aeAL~nLG~~L~ 480 (536)
|++++|+.+|++|+++ ++..+.+++++|.+++ ..|++++|+.+|++|+++.+.. +.++.++|.++.
T Consensus 117 g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 195 (383)
T 3ulq_A 117 REYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYY-YMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFL 195 (383)
T ss_dssp TCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHH
Confidence 8999999999999998 3335689999999888 6999999999999999995443 568999999888
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCCCcccc
Q 009385 481 RVRNDLWAAEETFLEAISADPTNS------YYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 481 e~~GD~eEAee~feKALeLDPdNp------eal~NyA~~L~elGr~E~cl 524 (536)
.. |++++|+++|++|+++.|... .++.++|.++..+|+.+++.
T Consensus 196 ~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~ 244 (383)
T 3ulq_A 196 DL-KQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAI 244 (383)
T ss_dssp HT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred Hh-cCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 75 699999999999999866443 47899999999999976543
No 158
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.90 E-value=1.6e-08 Score=96.51 Aligned_cols=109 Identities=15% Similarity=0.042 Sum_probs=91.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPL------LLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD------AESFSKYASFLWR 481 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~e------AL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd------aeAL~nLG~~L~e 481 (536)
++|++|+..|+++++..|.... .++++|.++. ..|++++|+.+|++|+++.+.. ..+++++|.++..
T Consensus 89 ~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 167 (293)
T 2qfc_A 89 KRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVL-KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE 167 (293)
T ss_dssp TCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH-TSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 8999999999999999887663 3556676655 5789999999999999876655 6799999998887
Q ss_pred hcCCHHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHHHcCCCcccc
Q 009385 482 VRNDLWAAEETFLEAI---SADPTNS----YYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 482 ~~GD~eEAee~feKAL---eLDPdNp----eal~NyA~~L~elGr~E~cl 524 (536)
. |++++|+.+|++|+ +..|++. .++.|+|.++..+|++++++
T Consensus 168 ~-~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al 216 (293)
T 2qfc_A 168 N-GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESL 216 (293)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred c-CCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHH
Confidence 4 69999999999999 5577754 57899999999999987654
No 159
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.89 E-value=2e-09 Score=103.00 Aligned_cols=104 Identities=13% Similarity=0.162 Sum_probs=93.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhc
Q 009385 414 ADYFRTELLYQTGLAQEPNDP----LLLANYAQFLYIVAHDYDRAEEYFKRAIAV------EPPDAESFSKYASFLWRVR 483 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~----eAL~NLA~lL~e~~GD~deAEe~FeKALeL------DPddaeAL~nLG~~L~e~~ 483 (536)
|++++|+.+|+++++++|+++ .++.++|.+++ ..|++++|+.+|++++.+ .|..+.++..+|.++.. .
T Consensus 23 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-~ 100 (406)
T 3sf4_A 23 GDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKV-L 100 (406)
T ss_dssp TCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-T
T ss_pred ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH-c
Confidence 899999999999999999995 67889998887 699999999999999998 56668899999998876 4
Q ss_pred CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCC
Q 009385 484 NDLWAAEETFLEAISADPTN------SYYAANYANFLWNTGG 519 (536)
Q Consensus 484 GD~eEAee~feKALeLDPdN------peal~NyA~~L~elGr 519 (536)
|++++|+.+|++|+++.|.. +.++.++|.++...|+
T Consensus 101 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 101 GNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 79999999999999997754 4478899999999998
No 160
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.89 E-value=1.5e-09 Score=103.81 Aligned_cols=108 Identities=13% Similarity=0.099 Sum_probs=80.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPL------LLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD------AESFSKYASFLWR 481 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~e------AL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd------aeAL~nLG~~L~e 481 (536)
|++++|+.+|++++++.|+... ++.++|.++. ..|++++|+.+|++++++.|.. +.++.++|.++..
T Consensus 201 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 279 (406)
T 3sf4_A 201 GNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL 279 (406)
T ss_dssp TBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHH
Confidence 7888888888888877665543 7777887766 5788888888888888877766 6777888877765
Q ss_pred hcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCCccc
Q 009385 482 VRNDLWAAEETFLEAISADPTN------SYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 482 ~~GD~eEAee~feKALeLDPdN------peal~NyA~~L~elGr~E~c 523 (536)
.|++++|+.+|++|+++.+.. +.++.++|.++...|+.+++
T Consensus 280 -~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 326 (406)
T 3sf4_A 280 -LQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQA 326 (406)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred -hCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 458888888888888875544 55677888888888876544
No 161
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.87 E-value=1.9e-09 Score=104.25 Aligned_cols=109 Identities=12% Similarity=0.025 Sum_probs=82.9
Q ss_pred CCHHHHHHHHHHHHHhCCC--C----HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPN--D----PLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD------AESFSKYASFLWR 481 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPd--n----~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd------aeAL~nLG~~L~e 481 (536)
+++++|+.+|++|+++.+. + ..++.++|.++. . |++++|+++|++|+++.|.+ ..++.++|.++..
T Consensus 90 g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~ 167 (307)
T 2ifu_A 90 QRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLME-P-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVR 167 (307)
T ss_dssp TCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT-T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-c-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHH
Confidence 7888888888888887432 2 356778887765 4 88888888888888887754 5678888887776
Q ss_pred hcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCCCccccC
Q 009385 482 VRNDLWAAEETFLEAISADPTNS------YYAANYANFLWNTGGEDTCFP 525 (536)
Q Consensus 482 ~~GD~eEAee~feKALeLDPdNp------eal~NyA~~L~elGr~E~clp 525 (536)
. |++++|+.+|++|+++.|++. .++.+++.++..+|+.+.+..
T Consensus 168 ~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~ 216 (307)
T 2ifu_A 168 Q-QKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQK 216 (307)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred c-CCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 4 688888888888888888885 356777778888888776654
No 162
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.87 E-value=4.6e-09 Score=91.80 Aligned_cols=109 Identities=18% Similarity=0.096 Sum_probs=89.9
Q ss_pred cCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHHhcCC
Q 009385 413 YADYFRTELLYQTGLAQEP-NDPLLLANYAQFLYIVAHDYDRAEEYFKRAIA------VEPPDAESFSKYASFLWRVRND 485 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdP-dn~eAL~NLA~lL~e~~GD~deAEe~FeKALe------LDPddaeAL~nLG~~L~e~~GD 485 (536)
.|++++|++.++.... +| ....++.++|.++. ..|++++|+.+|+++++ ..|..+.++.++|.++... |+
T Consensus 5 ~g~~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~-g~ 81 (203)
T 3gw4_A 5 AHDYALAERQAQALLA-HPATASGARFMLGYVYA-FMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMA-GN 81 (203)
T ss_dssp --CHHHHHHHHHHHHT-STTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT-TC
T ss_pred cccHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHc-CC
Confidence 3899999996655544 55 77899999998887 69999999999999999 5667788999999988764 79
Q ss_pred HHHHHHHHHHHHHh---CCCC----HHHHHHHHHHHHHcCCCcccc
Q 009385 486 LWAAEETFLEAISA---DPTN----SYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 486 ~eEAee~feKALeL---DPdN----peal~NyA~~L~elGr~E~cl 524 (536)
+++|+.+|++|+++ .+++ ..++.++|.++...|+.+++.
T Consensus 82 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~ 127 (203)
T 3gw4_A 82 WDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGAR 127 (203)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999998 4543 456889999999999976543
No 163
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.87 E-value=1.1e-09 Score=108.92 Aligned_cols=92 Identities=13% Similarity=0.083 Sum_probs=48.0
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~ 492 (536)
.++|++|+.+|++||+++|++..+|+++|.++. ..|++++|+.+|+++++++|++..++.+++.+.....++.++|..+
T Consensus 243 ~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~-~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~ 321 (338)
T 2if4_A 243 LKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKA-ELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEM 321 (338)
T ss_dssp TTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHTTC-----------------------------
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999999999999999999999888 6999999999999999999999999999998866666788999999
Q ss_pred HHHHHHhCCCCHH
Q 009385 493 FLEAISADPTNSY 505 (536)
Q Consensus 493 feKALeLDPdNpe 505 (536)
|.+++..+|+++.
T Consensus 322 ~~~~l~~~p~~~~ 334 (338)
T 2if4_A 322 YKGIFKGKDEGGA 334 (338)
T ss_dssp -------------
T ss_pred HHHhhCCCCCCCC
Confidence 9999999998875
No 164
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.85 E-value=8.4e-09 Score=86.36 Aligned_cols=74 Identities=20% Similarity=0.212 Sum_probs=67.4
Q ss_pred CCCCHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH
Q 009385 430 EPNDPLLLANYAQFLYIVAHD---YDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSY 505 (536)
Q Consensus 430 dPdn~eAL~NLA~lL~e~~GD---~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpe 505 (536)
+|+|+.++..||.+++ ..++ .++|...|++||++||+++.++..+|..+++ .|+|++|+.+|+++++.+|.++.
T Consensus 2 ~p~~~~~~~~~a~al~-~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 2 NAVTATQLAAKATTLY-YLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-SFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CCCCHHHHHHHHHHHH-HTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CCCCHHHHHHHHHHHH-HhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCCcc
Confidence 7999999999999987 4555 7999999999999999999999999998887 57999999999999999998544
No 165
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.85 E-value=2.5e-09 Score=103.41 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=83.8
Q ss_pred CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPND------PLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDA------ESFSKYASFLWR 481 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn------~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdda------eAL~nLG~~L~e 481 (536)
+++++|+.+|++|+++.|.. ..++.++|.++. ..|++++|+.+|++++++.|++. .++.++|.++..
T Consensus 129 g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~ 207 (307)
T 2ifu_A 129 LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLV-RQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLH 207 (307)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHH
Confidence 89999999999999998765 578999999887 69999999999999999977653 477788877765
Q ss_pred hcCCHHHHHHHHHHHHHhCCCCHHH-----HHHHHHHHHHcCCC
Q 009385 482 VRNDLWAAEETFLEAISADPTNSYY-----AANYANFLWNTGGE 520 (536)
Q Consensus 482 ~~GD~eEAee~feKALeLDPdNpea-----l~NyA~~L~elGr~ 520 (536)
.|++++|+.+|++++ ++|+.... +..++..+ ..|+.
T Consensus 208 -~g~~~~A~~~~~~al-~~p~~~~~~e~~~l~~l~~~~-~~~d~ 248 (307)
T 2ifu_A 208 -RADYVAAQKCVRESY-SIPGFSGSEDCAALEDLLQAY-DEQDE 248 (307)
T ss_dssp -TTCHHHHHHHHHHHT-TSTTSTTSHHHHHHHHHHHHH-HTTCH
T ss_pred -cCCHHHHHHHHHHHh-CCCCCCCCHHHHHHHHHHHHH-HhcCH
Confidence 469999999999999 99999743 33444433 45554
No 166
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.82 E-value=2.7e-09 Score=97.93 Aligned_cols=109 Identities=13% Similarity=0.121 Sum_probs=93.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDP------LLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD------AESFSKYASFLWR 481 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~------eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd------aeAL~nLG~~L~e 481 (536)
+++++|+.+|++++++.+... .++.++|.++. ..|++++|+++|++++++.|.. ..++..+|.++..
T Consensus 197 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 275 (338)
T 3ro2_A 197 GNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL 275 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Confidence 899999999999999866543 38899998887 6899999999999999998776 7889999998876
Q ss_pred hcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCCcccc
Q 009385 482 VRNDLWAAEETFLEAISADPTN------SYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 482 ~~GD~eEAee~feKALeLDPdN------peal~NyA~~L~elGr~E~cl 524 (536)
. |++++|+.+|++|+++.|.. ..++.++|.++...|+.+++.
T Consensus 276 ~-g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 323 (338)
T 3ro2_A 276 L-QDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAM 323 (338)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred h-cCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHH
Confidence 4 79999999999999986643 447889999999999876543
No 167
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.80 E-value=4.8e-08 Score=98.32 Aligned_cols=103 Identities=8% Similarity=-0.001 Sum_probs=75.3
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH----HHHh---CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHH
Q 009385 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFL----YIVA---HDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLW 487 (536)
Q Consensus 415 dyeeAee~YqKALeLdPdn~eAL~NLA~lL----~e~~---GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~e 487 (536)
++++++.++.++|..+|++..+|+..+.++ . .. ++++++.+++.++++.+|.|..+|+..+.++... ++++
T Consensus 84 ~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~-~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l-~~~~ 161 (306)
T 3dra_A 84 NLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIME-LNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTF-DLHN 161 (306)
T ss_dssp CHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHH-HTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCTT
T ss_pred cHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHH-hccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh-cccC
Confidence 777777777777777777777777777666 3 23 5677777777777777777777777777766554 4666
Q ss_pred --HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009385 488 --AAEETFLEAISADPTNSYYAANYANFLWNTGG 519 (536)
Q Consensus 488 --EAee~feKALeLDPdNpeal~NyA~~L~elGr 519 (536)
+++++++++++.||.|..++++.+.++...|+
T Consensus 162 ~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~ 195 (306)
T 3dra_A 162 DAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKH 195 (306)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGG
T ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 77777777777777777777777777766654
No 168
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.79 E-value=6.6e-09 Score=85.24 Aligned_cols=71 Identities=15% Similarity=0.021 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 452 DRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 452 deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
++|+.+|+++++.+|+++.+++++|.++... |++++|+.+|++|++++|+++.++.++|.++...|+.+++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A 72 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEH-EQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGA 72 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-cCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHH
Confidence 3688999999999999999999999988774 6999999999999999999999999999999999987654
No 169
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.79 E-value=8.9e-09 Score=98.22 Aligned_cols=110 Identities=13% Similarity=0.040 Sum_probs=88.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHH------HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLL------LANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD------AESFSKYASFLWR 481 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eA------L~NLA~lL~e~~GD~deAEe~FeKALeLDPdd------aeAL~nLG~~L~e 481 (536)
+++++|+.+|+++++..+.++.. +.++|.++. ..+++++|+.+|++|+.+.+.. ..+++++|.++..
T Consensus 89 ~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 167 (293)
T 3u3w_A 89 KRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVL-KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE 167 (293)
T ss_dssp TCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHT-TSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHH-cccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHH
Confidence 89999999999999998887762 334666555 5679999999999999976543 3479999998887
Q ss_pred hcCCHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHcCCCccccC
Q 009385 482 VRNDLWAAEETFLEAISA-------DPTNSYYAANYANFLWNTGGEDTCFP 525 (536)
Q Consensus 482 ~~GD~eEAee~feKALeL-------DPdNpeal~NyA~~L~elGr~E~clp 525 (536)
. |++++|+.+|++|++. .+..+.+++|+|.++..+|+++++..
T Consensus 168 ~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~ 217 (293)
T 3u3w_A 168 N-GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLY 217 (293)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred c-CCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 5 6999999999999953 12234578999999999999876643
No 170
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.79 E-value=3.1e-08 Score=106.79 Aligned_cols=102 Identities=13% Similarity=-0.005 Sum_probs=94.7
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcC
Q 009385 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHD----------YDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRN 484 (536)
Q Consensus 415 dyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD----------~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~G 484 (536)
..++|+++|.++|+++|++..+|++.+.++. ..++ +++|.++++++++.+|.+..+|+..+.++.. .+
T Consensus 44 ~~eeal~~~~~~l~~nP~~~taW~~R~~~l~-~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~-l~ 121 (567)
T 1dce_A 44 LDESVLELTSQILGANPDFATLWNCRREVLQ-HLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSR-LP 121 (567)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-CS
T ss_pred CCHHHHHHHHHHHHHCchhHHHHHHHHHHHH-hcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cc
Confidence 4468999999999999999999999999887 4666 9999999999999999999999999998876 46
Q ss_pred --CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 009385 485 --DLWAAEETFLEAISADPTNSYYAANYANFLWNTG 518 (536)
Q Consensus 485 --D~eEAee~feKALeLDPdNpeal~NyA~~L~elG 518 (536)
++++|++++++++++||.|..++.+.++++..+|
T Consensus 122 ~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~ 157 (567)
T 1dce_A 122 EPNWARELELCARFLEADERNFHCWDYRRFVAAQAA 157 (567)
T ss_dssp SCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcC
Confidence 6799999999999999999999999999999999
No 171
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.78 E-value=4.3e-09 Score=102.30 Aligned_cols=108 Identities=15% Similarity=0.157 Sum_probs=78.2
Q ss_pred CCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQ------EPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAV------EPPDAESFSKYASFLWR 481 (536)
Q Consensus 414 gdyeeAee~YqKALeL------dPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeL------DPddaeAL~nLG~~L~e 481 (536)
|++++|+.+|++++++ +|....++.++|.++. ..|++++|+.+|++++++ .|..+.++.++|.++..
T Consensus 100 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 178 (411)
T 4a1s_A 100 GDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHA 178 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Confidence 7788888888888777 5666777777887766 578888888888888877 56667777777777766
Q ss_pred hcCC-----------------HHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCCCccc
Q 009385 482 VRND-----------------LWAAEETFLEAISAD------PTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 482 ~~GD-----------------~eEAee~feKALeLD------PdNpeal~NyA~~L~elGr~E~c 523 (536)
. |+ +++|+.+|++++++. |..+.++.++|.++...|+.+++
T Consensus 179 ~-g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 242 (411)
T 4a1s_A 179 K-GKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAA 242 (411)
T ss_dssp H-HHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred c-CcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHH
Confidence 4 47 777888877777763 23344677777777777776544
No 172
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.78 E-value=1e-08 Score=103.98 Aligned_cols=88 Identities=16% Similarity=0.209 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 009385 434 PLLLANYAQFLYIVAHDYDRAEEYFKRAIA----------------VEPPDAESFSKYASFLWRVRNDLWAAEETFLEAI 497 (536)
Q Consensus 434 ~eAL~NLA~lL~e~~GD~deAEe~FeKALe----------------LDPddaeAL~nLG~~L~e~~GD~eEAee~feKAL 497 (536)
...+.++|..++ ..|++++|+++|++||+ ++|.++.+++++|.++... |++++|+++|++|+
T Consensus 223 a~~~~~~g~~~~-~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~-g~~~~A~~~~~~al 300 (370)
T 1ihg_A 223 SEDLKNIGNTFF-KSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKM-SDWQGAVDSCLEAL 300 (370)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhc-cCHHHHHHHHHHHH
Confidence 466888998888 69999999999999999 8899999999999988875 69999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 498 SADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 498 eLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+++|+++.+++++|.+|..+|+++++
T Consensus 301 ~~~p~~~~a~~~lg~~~~~~g~~~eA 326 (370)
T 1ihg_A 301 EIDPSNTKALYRRAQGWQGLKEYDQA 326 (370)
T ss_dssp TTCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HhCchhHHHHHHHHHHHHHccCHHHH
Confidence 99999999999999999999997654
No 173
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.78 E-value=8.2e-09 Score=101.55 Aligned_cols=108 Identities=18% Similarity=-0.009 Sum_probs=84.3
Q ss_pred CCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPN-------DPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEP------PDAESFSKYASFLW 480 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPd-------n~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDP------ddaeAL~nLG~~L~ 480 (536)
+++++|+.+|++|+++.+. ...++.++|.++. ..|++++|+++|++|+++.+ ..+.++.++|.++.
T Consensus 155 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 233 (378)
T 3q15_A 155 KQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYD-DFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYD 233 (378)
T ss_dssp TCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 7888888888888887543 2456778887776 68888899999988888743 12457888888777
Q ss_pred HhcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 481 RVRNDLWAAEETFLEAIS-----ADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 481 e~~GD~eEAee~feKALe-----LDPdNpeal~NyA~~L~elGr~E~c 523 (536)
.. |++++|+.+|++|++ .+|..+.++.++|.++...|+.+++
T Consensus 234 ~~-~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 280 (378)
T 3q15_A 234 RS-GDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKA 280 (378)
T ss_dssp HH-TCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHH
T ss_pred HC-CCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHH
Confidence 64 688899999998888 7787788888888888888886543
No 174
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.74 E-value=2.1e-09 Score=112.41 Aligned_cols=89 Identities=19% Similarity=0.114 Sum_probs=80.3
Q ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009385 433 DPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYAN 512 (536)
Q Consensus 433 n~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~ 512 (536)
.+.++.++|..++ ..|++++|+++|++|++++|+++.+++++|.++... |++++|+++|++|++++|+++.+++++|.
T Consensus 5 ~a~~~~~lg~~~~-~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~-g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 5 RAEELKTQANDYF-KAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRT-ECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHTTSSSSSSSTT-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 3455667787777 589999999999999999999999999999988875 69999999999999999999999999999
Q ss_pred HHHHcCCCccc
Q 009385 513 FLWNTGGEDTC 523 (536)
Q Consensus 513 ~L~elGr~E~c 523 (536)
++..+|+.+++
T Consensus 83 ~~~~~g~~~eA 93 (477)
T 1wao_1 83 SNMALGKFRAA 93 (477)
T ss_dssp HHHHHTCHHHH
T ss_pred HHHHcCCHHHH
Confidence 99999987654
No 175
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.73 E-value=1e-07 Score=95.83 Aligned_cols=106 Identities=9% Similarity=0.055 Sum_probs=98.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCC------
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYD--RAEEYFKRAIAVEPPDAESFSKYASFLWRVRND------ 485 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~d--eAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD------ 485 (536)
+++.+++.++.++|+.+|+|..+|.+.+.++. ..++++ ++.++++++|+.||.|..||++.+.++... ++
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~-~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l-~~~~~~~~ 201 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHVWSYRKWLVD-TFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSK-KHLATDNT 201 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSS-GGGCCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc-cccchhhh
Confidence 57899999999999999999999999998877 589888 999999999999999999999999888764 45
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009385 486 LWAAEETFLEAISADPTNSYYAANYANFLWNTGGED 521 (536)
Q Consensus 486 ~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E 521 (536)
+++++++++++|.++|+|..++++++.++...|+..
T Consensus 202 ~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~ 237 (306)
T 3dra_A 202 IDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSI 237 (306)
T ss_dssp HHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCCh
Confidence 999999999999999999999999999999999753
No 176
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.71 E-value=7.8e-08 Score=83.88 Aligned_cols=80 Identities=14% Similarity=0.065 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh---cCCHH
Q 009385 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIV----AHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRV---RNDLW 487 (536)
Q Consensus 415 dyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~----~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~---~GD~e 487 (536)
..++|+.+|++|.+. +++.+++++|.++. . .+|+++|.++|++|.+. +++.++++||.++..- .+|++
T Consensus 40 ~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~ 114 (138)
T 1klx_A 40 NKQKLFQYLSKACEL--NSGNGCRFLGDFYE-NGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEK 114 (138)
T ss_dssp CHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHH
T ss_pred CHHHHHHHHHHHHcC--CCHHHHHHHHHHHH-cCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHH
Confidence 444455555555554 44555555554443 2 34555555555555544 4555555555544430 23555
Q ss_pred HHHHHHHHHHHh
Q 009385 488 AAEETFLEAISA 499 (536)
Q Consensus 488 EAee~feKALeL 499 (536)
+|+.+|++|.+.
T Consensus 115 ~A~~~~~~Aa~~ 126 (138)
T 1klx_A 115 QAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHC
Confidence 555555555554
No 177
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.71 E-value=1.8e-07 Score=81.51 Aligned_cols=100 Identities=10% Similarity=0.042 Sum_probs=84.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh---cCCHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRV---RNDLWAAE 490 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~---~GD~eEAe 490 (536)
+++++|+.+|++|.+....... +|.++. ..+..++|.++|++|.+. +++.++++||.++..- .+|+++|+
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~a~----lg~~y~-~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMFGC----LSLVSN-SQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHH----HHHHTC-TTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHhhh----HHHHHH-cCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 5899999999999998754444 887766 567899999999999987 8999999999988761 36999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHH----cCCCcc
Q 009385 491 ETFLEAISADPTNSYYAANYANFLWN----TGGEDT 522 (536)
Q Consensus 491 e~feKALeLDPdNpeal~NyA~~L~e----lGr~E~ 522 (536)
.+|++|.+. .++.+.+++|.+|.. .++.++
T Consensus 82 ~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~ 115 (138)
T 1klx_A 82 QYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQ 115 (138)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHH
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHH
Confidence 999999987 789999999999988 555543
No 178
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.70 E-value=4e-07 Score=93.08 Aligned_cols=146 Identities=12% Similarity=0.002 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHhccccccccccHHHHHHhcCccccccCcccc-------------CC----------HHHHHHHHHH
Q 009385 369 EEELNLWNSIVDEASQMQVTDESLDHETMERFVSPVTANIEADDY-------------AD----------YFRTELLYQT 425 (536)
Q Consensus 369 e~EvaLwnsmvaEA~~mQ~~d~~lD~ea~krlvspV~AeLepDd~-------------gd----------yeeAee~YqK 425 (536)
+.++..|...++..-..-+ ....++++++-....+ .+.|++| +. +.+++.++.+
T Consensus 23 ~~ki~~y~~~~~~~~~~~~-~~e~s~eaL~~t~~~L--~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~ 99 (331)
T 3dss_A 23 EQKLKLYQSATQAVFQKRQ-AGELDESVLELTSQIL--GANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLES 99 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTCCSHHHHHHHHHHH--TTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCCHHHHHHHHHHH--HHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHH
Confidence 4556666665555433222 3356667766444444 5556533 12 6889999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHhCCC
Q 009385 426 GLAQEPNDPLLLANYAQFLYIVAH--DYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRND-LWAAEETFLEAISADPT 502 (536)
Q Consensus 426 ALeLdPdn~eAL~NLA~lL~e~~G--D~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD-~eEAee~feKALeLDPd 502 (536)
+|..+|++..+|++.+.++. ..+ +++++..++.++++.||.|..+|+..+.++... ++ +++++++++++++.+|.
T Consensus 100 ~L~~~PKny~aW~hR~wlL~-~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l-~~~~~eel~~~~~~I~~~p~ 177 (331)
T 3dss_A 100 CLRVNPKSYGTWHHRCWLLS-RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQA-AVAPAEELAFTDSLITRNFS 177 (331)
T ss_dssp HHHHCTTCHHHHHHHHHHHH-HCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHCSC
T ss_pred HHHhCCCCHHHHHHHHHHHh-ccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh-CcCHHHHHHHHHHHHHHCCC
Confidence 99999999999999998877 567 599999999999999999999999999988765 46 69999999999999999
Q ss_pred CHHHHHHHHHHHHHcCC
Q 009385 503 NSYYAANYANFLWNTGG 519 (536)
Q Consensus 503 Npeal~NyA~~L~elGr 519 (536)
|..++++.+.++..++.
T Consensus 178 N~SAW~~R~~ll~~l~~ 194 (331)
T 3dss_A 178 NYSSWHYRSCLLPQLHP 194 (331)
T ss_dssp CHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHhhh
Confidence 99999999999988743
No 179
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.70 E-value=2e-08 Score=93.30 Aligned_cols=70 Identities=16% Similarity=0.209 Sum_probs=64.6
Q ss_pred hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 009385 448 AHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRND----------LWAAEETFLEAISADPTNSYYAANYANFLWNT 517 (536)
Q Consensus 448 ~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD----------~eEAee~feKALeLDPdNpeal~NyA~~L~el 517 (536)
.+.+++|++.|++|++++|+++++|+++|.++.... + +++|+..|++||+++|+++.+++++|.+|..+
T Consensus 15 ~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~-~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 15 ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELS-QFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhc-ccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999888754 4 56999999999999999999999999999987
Q ss_pred C
Q 009385 518 G 518 (536)
Q Consensus 518 G 518 (536)
|
T Consensus 94 g 94 (158)
T 1zu2_A 94 A 94 (158)
T ss_dssp H
T ss_pred c
Confidence 6
No 180
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.70 E-value=3.7e-08 Score=100.15 Aligned_cols=89 Identities=13% Similarity=0.178 Sum_probs=80.5
Q ss_pred CCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHhcCC
Q 009385 414 ADYFRTELLYQTGLAQEPN--DPLLLANYAQFLYIV-----AHDYDRAEEYFKRAIAVEPPD-AESFSKYASFLWRVRND 485 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPd--n~eAL~NLA~lL~e~-----~GD~deAEe~FeKALeLDPdd-aeAL~nLG~~L~e~~GD 485 (536)
+...+|...+++||++||+ +..+|.-+|.+|+ . -|+.++|+++|+|||+++|+. .++++.||.++....+|
T Consensus 177 ~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~-~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd 255 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYA-AAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNN 255 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH-HSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTC
T ss_pred HhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHH-hCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCC
Confidence 4677899999999999999 7789999998776 4 399999999999999999985 99999999999876679
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 009385 486 LWAAEETFLEAISADPTN 503 (536)
Q Consensus 486 ~eEAee~feKALeLDPdN 503 (536)
+++|++++++|++++|..
T Consensus 256 ~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 256 RAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHHHcCCCCC
Confidence 999999999999998873
No 181
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.68 E-value=4e-08 Score=95.25 Aligned_cols=108 Identities=17% Similarity=0.153 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHH-----HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHh
Q 009385 414 ADYFRTELLYQTGLAQEPNDPL-----LLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDA------ESFSKYASFLWRV 482 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~e-----AL~NLA~lL~e~~GD~deAEe~FeKALeLDPdda------eAL~nLG~~L~e~ 482 (536)
|++++|+.++++++...|.+.. ++.++|.++. ..|++++|+.+|++++++.|... .++.++|.++..
T Consensus 28 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~- 105 (373)
T 1hz4_A 28 GNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLH-CKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA- 105 (373)
T ss_dssp TCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH-
Confidence 8999999999999999886632 6778888777 68999999999999999876543 347789988876
Q ss_pred cCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHcCCCccc
Q 009385 483 RNDLWAAEETFLEAISAD--------PTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 483 ~GD~eEAee~feKALeLD--------PdNpeal~NyA~~L~elGr~E~c 523 (536)
.|++++|+.+|++++++. |....++.++|.+++..|+.+++
T Consensus 106 ~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 154 (373)
T 1hz4_A 106 QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEA 154 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHH
Confidence 479999999999999985 33456788899999999987644
No 182
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.67 E-value=9.3e-08 Score=88.55 Aligned_cols=96 Identities=14% Similarity=0.076 Sum_probs=86.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHhcCCHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAH---DYDRAEEYFKRAIAVE-P-PDAESFSKYASFLWRVRNDLWA 488 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~G---D~deAEe~FeKALeLD-P-ddaeAL~nLG~~L~e~~GD~eE 488 (536)
+....+++.|.+++..+|.+.++.++||..|. ..+ +.++++.+|+..++.+ | ++.+.++++|..+++. ++|++
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv-~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl-~~Y~~ 89 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLV-RSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRL-KEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH-TCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT-SCHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHc-cCHHH
Confidence 57889999999999999999999999998887 455 7889999999999999 8 6799999999999875 69999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHH
Q 009385 489 AEETFLEAISADPTNSYYAANYA 511 (536)
Q Consensus 489 Aee~feKALeLDPdNpeal~NyA 511 (536)
|+.+++++++++|+|.++..-.-
T Consensus 90 A~~y~~~lL~ieP~n~QA~~Lk~ 112 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQNNQAKELER 112 (152)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHH
Confidence 99999999999999998865433
No 183
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.66 E-value=4.3e-08 Score=95.04 Aligned_cols=108 Identities=18% Similarity=0.103 Sum_probs=89.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDP------LLLANYAQFLYIVAHDYDRAEEYFKRAIAVE--------PPDAESFSKYASFL 479 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~------eAL~NLA~lL~e~~GD~deAEe~FeKALeLD--------PddaeAL~nLG~~L 479 (536)
|++++|+.+|++++.+.|... .++.++|.++. ..|++++|+.+|++++++. |....++.++|.++
T Consensus 67 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 145 (373)
T 1hz4_A 67 GELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILF-AQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLL 145 (373)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHH
Confidence 899999999999999866543 34678898877 6999999999999999976 44567788899988
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCCccc
Q 009385 480 WRVRNDLWAAEETFLEAISADPTN-----SYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 480 ~e~~GD~eEAee~feKALeLDPdN-----peal~NyA~~L~elGr~E~c 523 (536)
+.. |++++|+.+|++++++.|.. ...+.++|.++...|+.+++
T Consensus 146 ~~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 193 (373)
T 1hz4_A 146 WAW-ARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNA 193 (373)
T ss_dssp HHT-TCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHH
T ss_pred HHh-cCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 875 79999999999999998753 45688899999999987654
No 184
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.62 E-value=1.9e-07 Score=96.33 Aligned_cols=106 Identities=11% Similarity=-0.009 Sum_probs=97.3
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcC-CHHHHHHH
Q 009385 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAH-DYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRN-DLWAAEET 492 (536)
Q Consensus 415 dyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~G-D~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~G-D~eEAee~ 492 (536)
..++|++++.++|.++|++..+|+..+.++. ..+ ++++++++++++|..+|.+..+|+..+.++....+ ++++++++
T Consensus 69 ~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~-~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~ 147 (349)
T 3q7a_A 69 KSERALELTEIIVRMNPAHYTVWQYRFSLLT-SLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEY 147 (349)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHH
T ss_pred CCHHHHHHHHHHHHhCchhHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHH
Confidence 4568999999999999999999999999887 577 69999999999999999999999999999887635 89999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009385 493 FLEAISADPTNSYYAANYANFLWNTGGED 521 (536)
Q Consensus 493 feKALeLDPdNpeal~NyA~~L~elGr~E 521 (536)
+.++++++|.|..++.+.++++...|+.+
T Consensus 148 ~~k~L~~dpkNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 148 IHGSLLPDPKNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp HHHHTSSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999998888655
No 185
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.60 E-value=1.1e-07 Score=97.87 Aligned_cols=95 Identities=18% Similarity=0.162 Sum_probs=69.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh---cCCHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLY--IVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRV---RNDLWA 488 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~--e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~---~GD~eE 488 (536)
+++++|+.+|++|+ |+++.+++++|.+++ ...+|+++|+.+|++|++ ++++.++++||.++... ..|+++
T Consensus 231 ~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~--~g~~~A~~~Lg~~y~~G~g~~~d~~~ 305 (452)
T 3e4b_A 231 PDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRA--ADQPRAELLLGKLYYEGKWVPADAKA 305 (452)
T ss_dssp CCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHCSSSCCCHHH
T ss_pred CCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCCCCHHH
Confidence 57778888888877 778888888887644 346788888888888774 44778888888766531 027888
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009385 489 AEETFLEAISADPTNSYYAANYANFLWN 516 (536)
Q Consensus 489 Aee~feKALeLDPdNpeal~NyA~~L~e 516 (536)
|+.+|++|+ |+++.+++++|.+|..
T Consensus 306 A~~~~~~Aa---~g~~~A~~~Lg~~y~~ 330 (452)
T 3e4b_A 306 AEAHFEKAV---GREVAADYYLGQIYRR 330 (452)
T ss_dssp HHHHHHTTT---TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHh---CCCHHHHHHHHHHHHC
Confidence 888888887 7788888888876655
No 186
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.59 E-value=2.5e-08 Score=100.19 Aligned_cols=94 Identities=10% Similarity=-0.167 Sum_probs=69.0
Q ss_pred CCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHhcCCHHH
Q 009385 414 ADYFRTELLYQTGLAQEPND--PLLLANYAQFLYIVAHDYDRAEEYFKRAIAVE--PP-DAESFSKYASFLWRVRNDLWA 488 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn--~eAL~NLA~lL~e~~GD~deAEe~FeKALeLD--Pd-daeAL~nLG~~L~e~~GD~eE 488 (536)
+++++|+.+|++++...+.. ..+++++|.++. ..|++++|+.+|++++.-. |. .+++++++|.+|..+ |+.++
T Consensus 149 ~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~-~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~l-Gr~de 226 (282)
T 4f3v_A 149 ERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAA-NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQ-GNESA 226 (282)
T ss_dssp TCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHH-TCHHH
T ss_pred CCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHH-HCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHc-CCHHH
Confidence 78888888888776643221 347788887776 5888888888888887544 55 567888888877765 58888
Q ss_pred HHHHHHHHHHhCCCCHHHHHHH
Q 009385 489 AEETFLEAISADPTNSYYAANY 510 (536)
Q Consensus 489 Aee~feKALeLDPdNpeal~Ny 510 (536)
|...|+++++.+|+ +.+...+
T Consensus 227 A~~~l~~a~a~~P~-~~~~~aL 247 (282)
T 4f3v_A 227 AVALLEWLQTTHPE-PKVAAAL 247 (282)
T ss_dssp HHHHHHHHHHHSCC-HHHHHHH
T ss_pred HHHHHHHHHhcCCc-HHHHHHH
Confidence 88888888888888 6654443
No 187
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.58 E-value=1.8e-07 Score=96.38 Aligned_cols=95 Identities=16% Similarity=0.110 Sum_probs=79.1
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC-----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh---cC
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAH-----DYDRAEEYFKRAIAVEPPDAESFSKYASFLWRV---RN 484 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~G-----D~deAEe~FeKALeLDPddaeAL~nLG~~L~e~---~G 484 (536)
.+++++|+.+|++|++. +++.+++++|.++. .| |+++|+++|++|+ |+++.++++||.++... ..
T Consensus 264 ~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~--~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~ 336 (452)
T 3e4b_A 264 LGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY--EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKV 336 (452)
T ss_dssp GCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH--HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSC
T ss_pred CCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH--cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCc
Confidence 47999999999999865 48999999997765 46 9999999999998 99999999999876542 23
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009385 485 DLWAAEETFLEAISADPTNSYYAANYANFLWN 516 (536)
Q Consensus 485 D~eEAee~feKALeLDPdNpeal~NyA~~L~e 516 (536)
|+++|+.+|++|.+ ++++.+.+++|.+|..
T Consensus 337 d~~~A~~~~~~Aa~--~g~~~A~~~Lg~~y~~ 366 (452)
T 3e4b_A 337 YPQKALDHLLTAAR--NGQNSADFAIAQLFSQ 366 (452)
T ss_dssp CHHHHHHHHHHHHT--TTCTTHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHh--hChHHHHHHHHHHHHh
Confidence 89999999999976 5677888899997754
No 188
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.58 E-value=1.9e-07 Score=98.14 Aligned_cols=95 Identities=13% Similarity=0.152 Sum_probs=80.7
Q ss_pred ccCCHHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHh-----CCCCH---HHHHHH
Q 009385 412 DYADYFRTELLYQTGLAQ-----EPNDPL---LLANYAQFLYIVAHDYDRAEEYFKRAIAV-----EPPDA---ESFSKY 475 (536)
Q Consensus 412 d~gdyeeAee~YqKALeL-----dPdn~e---AL~NLA~lL~e~~GD~deAEe~FeKALeL-----DPdda---eAL~nL 475 (536)
.+|+|++|+.+|+++|++ .|+|+. .+.|+|.+|. .+|+|++|+.+|+++|++ .|+|+ ..+++|
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~-~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nL 388 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCL-YMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKL 388 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 568999999999999996 577764 5788998887 699999999999999986 46666 468999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHh-----CCCCHHHHH
Q 009385 476 ASFLWRVRNDLWAAEETFLEAISA-----DPTNSYYAA 508 (536)
Q Consensus 476 G~~L~e~~GD~eEAee~feKALeL-----DPdNpeal~ 508 (536)
|.+++.+ |++++|+.+|++|+++ -|++|....
T Consensus 389 a~~~~~q-g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 425 (433)
T 3qww_A 389 GRLYMGL-ENKAAGEKALKKAIAIMEVAHGKDHPYISE 425 (433)
T ss_dssp HHHHHHT-TCHHHHHHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred HHHHHhc-cCHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 9988875 6999999999999985 688887644
No 189
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.57 E-value=5.4e-07 Score=75.18 Aligned_cols=81 Identities=15% Similarity=0.147 Sum_probs=68.9
Q ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH
Q 009385 433 DPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVE-------PPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSY 505 (536)
Q Consensus 433 n~eAL~NLA~lL~e~~GD~deAEe~FeKALeLD-------PddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpe 505 (536)
.+.-.+.+|..++ ..++|+.|+..|++|++.. +..++++.+||.+++.. |++++|+.++++|++++|+++.
T Consensus 4 sa~dc~~lG~~~~-~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~-g~~~~A~~~~~~al~l~P~~~~ 81 (104)
T 2v5f_A 4 TAEDCFELGKVAY-TEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQ-GDLDKALLLTKKLLELDPEHQR 81 (104)
T ss_dssp CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHH-HccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHc-cCHHHHHHHHHHHHhcCCCCHH
Confidence 3456678999888 6899999999999999974 45688999999998875 6999999999999999999999
Q ss_pred HHHHHHHHHH
Q 009385 506 YAANYANFLW 515 (536)
Q Consensus 506 al~NyA~~L~ 515 (536)
++.|++.+-.
T Consensus 82 ~~~n~~~~~~ 91 (104)
T 2v5f_A 82 ANGNLKYFEY 91 (104)
T ss_dssp HHHHHHHHHH
T ss_pred HHhhHHHHHH
Confidence 9998885443
No 190
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.57 E-value=4.2e-07 Score=92.87 Aligned_cols=102 Identities=15% Similarity=0.100 Sum_probs=84.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh---cCCHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAH---DYDRAEEYFKRAIAVEPPDAESFSKYASFLWRV---RNDLW 487 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~G---D~deAEe~FeKALeLDPddaeAL~nLG~~L~e~---~GD~e 487 (536)
+++++|+.+|++|++. +++.+++++|.++. ..| ++++|+++|++|++. +++.++++||.++... .++++
T Consensus 310 ~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~-~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~ 384 (490)
T 2xm6_A 310 KNREQAISWYTKSAEQ--GDATAQANLGAIYF-RLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQ 384 (490)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHH
T ss_pred CCHHHHHHHHHHHHhc--CCHHHHHHHHHHHH-hCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHH
Confidence 7899999999999886 56889999998776 335 889999999999987 7899999999887651 35899
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCCcc
Q 009385 488 AAEETFLEAISADPTNSYYAANYANFLWN----TGGEDT 522 (536)
Q Consensus 488 EAee~feKALeLDPdNpeal~NyA~~L~e----lGr~E~ 522 (536)
+|+.+|++|++. +++.+++++|.++.. .++.++
T Consensus 385 ~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~ 421 (490)
T 2xm6_A 385 QAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDYVQ 421 (490)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHH
T ss_pred HHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCHHH
Confidence 999999999886 468899999999987 565543
No 191
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.57 E-value=1.6e-07 Score=92.35 Aligned_cols=105 Identities=14% Similarity=0.008 Sum_probs=84.2
Q ss_pred cCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPN------DPLLLANYAQFLYIVAHDYDRAEEYFKRAIA-----VEPPDAESFSKYASFLWR 481 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPd------n~eAL~NLA~lL~e~~GD~deAEe~FeKALe-----LDPddaeAL~nLG~~L~e 481 (536)
.|++++|+.+|++|+++.+. ...++.++|.++. ..|++++|+.+|++|++ .+|..+.++.++|.++..
T Consensus 195 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~ 273 (378)
T 3q15_A 195 FKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYD-RSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCK 273 (378)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHH
Confidence 38999999999999997431 2467889998887 69999999999999999 889999999999999887
Q ss_pred hcCCHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHHcCC
Q 009385 482 VRNDLWAAEETFLEAISADPT-----NSYYAANYANFLWNTGG 519 (536)
Q Consensus 482 ~~GD~eEAee~feKALeLDPd-----Npeal~NyA~~L~elGr 519 (536)
. |++++|+.+|++|+++.+. ....+..++.++...|+
T Consensus 274 ~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~ly~~~~~ 315 (378)
T 3q15_A 274 A-GQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVD 315 (378)
T ss_dssp T-TCHHHHHHHHHHHHHHCCTTCCSCHHHHHHHHHHHHSSSCC
T ss_pred C-CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCc
Confidence 5 6999999999999998443 23333444444444443
No 192
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.56 E-value=2.2e-07 Score=76.26 Aligned_cols=87 Identities=9% Similarity=0.094 Sum_probs=74.4
Q ss_pred CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPND------PLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPP------DAESFSKYASFLWR 481 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn------~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPd------daeAL~nLG~~L~e 481 (536)
+++++|+.+|++++++.+.. ..++.++|.++. ..|++++|+++|++++++.+. .+.++.++|.++..
T Consensus 63 g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~ 141 (164)
T 3ro3_A 63 GEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT-LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTA 141 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHH
Confidence 89999999999999987654 678889998887 699999999999999988432 25688899998877
Q ss_pred hcCCHHHHHHHHHHHHHhCCC
Q 009385 482 VRNDLWAAEETFLEAISADPT 502 (536)
Q Consensus 482 ~~GD~eEAee~feKALeLDPd 502 (536)
. |++++|+++|++|+++...
T Consensus 142 ~-g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 142 L-GNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp H-TCHHHHHHHHHHHHHHHTT
T ss_pred c-cCHHHHHHHHHHHHHHHHH
Confidence 5 6999999999999997554
No 193
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.55 E-value=1.3e-07 Score=100.78 Aligned_cols=106 Identities=14% Similarity=0.141 Sum_probs=87.3
Q ss_pred ccCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-----CCCCH---HHHHHH
Q 009385 412 DYADYFRTELLYQTGLAQ-----EPNDP---LLLANYAQFLYIVAHDYDRAEEYFKRAIAV-----EPPDA---ESFSKY 475 (536)
Q Consensus 412 d~gdyeeAee~YqKALeL-----dPdn~---eAL~NLA~lL~e~~GD~deAEe~FeKALeL-----DPdda---eAL~nL 475 (536)
..|+|++|+.+|+++|++ .|+|+ .++.|+|.+|. .+|+|++|+.+|+++|++ .|+|+ ..+++|
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~-~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nL 399 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLS-YLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRA 399 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 348999999999999987 46665 56888998877 699999999999999986 47776 468899
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHh-----CCCCHHH---HHHHHHHHHHcCC
Q 009385 476 ASFLWRVRNDLWAAEETFLEAISA-----DPTNSYY---AANYANFLWNTGG 519 (536)
Q Consensus 476 G~~L~e~~GD~eEAee~feKALeL-----DPdNpea---l~NyA~~L~elGr 519 (536)
|.+++.+ |++++|+.+|++|+++ -|++|.. +.+++.++.++|.
T Consensus 400 a~~~~~~-G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~ 450 (490)
T 3n71_A 400 GLTNWHA-GHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRM 450 (490)
T ss_dssp HHHHHHT-TCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHC-CCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHH
Confidence 9988875 7999999999999985 7888865 4567777766654
No 194
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.53 E-value=7.5e-07 Score=91.05 Aligned_cols=104 Identities=13% Similarity=0.013 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcC-
Q 009385 416 YFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHD----------YDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRN- 484 (536)
Q Consensus 416 yeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD----------~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~G- 484 (536)
.++|+.++.++|.++|++..+|+..+.++. ..++ ++++..++.++|..+|.+..+|+..+.++...+.
T Consensus 46 s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~-~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~ 124 (331)
T 3dss_A 46 DESVLELTSQILGANPDFATLWNCRREVLQ-HLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEP 124 (331)
T ss_dssp SHHHHHHHHHHHTTCTTCHHHHHHHHHHHH-HHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSC
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHH-HhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcc
Confidence 347999999999999999999999998876 3444 7899999999999999999999999998876542
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q 009385 485 DLWAAEETFLEAISADPTNSYYAANYANFLWNTGGE 520 (536)
Q Consensus 485 D~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~ 520 (536)
+++++++++.+++++||.|..++.+.++++...|..
T Consensus 125 ~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~ 160 (331)
T 3dss_A 125 NWARELELCARFLEADERNFHCWDYRRFVAAQAAVA 160 (331)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcC
Confidence 589999999999999999999999999999999873
No 195
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.53 E-value=7.9e-07 Score=90.89 Aligned_cols=97 Identities=13% Similarity=0.134 Sum_probs=66.7
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh---cCC
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIV----AHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRV---RND 485 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~----~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~---~GD 485 (536)
.+++++|+.+|++|++. +++.+++++|.++. . .+++++|+++|++|++. +++.++++||.++... .++
T Consensus 92 ~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~-~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~d 166 (490)
T 2xm6_A 92 PQDYAQAVIWYKKAALK--GLPQAQQNLGVMYH-EGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYFEGDGVTRD 166 (490)
T ss_dssp CCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCC
T ss_pred CCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCC
Confidence 46777777777777664 46777777776655 4 46777777777777654 5677777777766541 347
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009385 486 LWAAEETFLEAISADPTNSYYAANYANFLWN 516 (536)
Q Consensus 486 ~eEAee~feKALeLDPdNpeal~NyA~~L~e 516 (536)
+++|+++|++|++. +++.++.++|.++..
T Consensus 167 ~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~ 195 (490)
T 2xm6_A 167 YVMAREWYSKAAEQ--GNVWSCNQLGYMYSR 195 (490)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHhc
Confidence 77777777777765 467777777777766
No 196
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.46 E-value=9.2e-07 Score=92.28 Aligned_cols=106 Identities=9% Similarity=-0.061 Sum_probs=57.9
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--HhC--C---HHHHHHHHH--HHHHhCCCCHHHHHHHHHHHHHhc
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYI--VAH--D---YDRAEEYFK--RAIAVEPPDAESFSKYASFLWRVR 483 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e--~~G--D---~deAEe~Fe--KALeLDPddaeAL~nLG~~L~e~~ 483 (536)
..++.+|+.+|++|++++|+++.++..++..+.. ..+ . .......++ .++..+|.++.++..++..++. .
T Consensus 212 ~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~-~ 290 (372)
T 3ly7_A 212 DKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALV-K 290 (372)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHh-C
Confidence 3678999999999999999999999876654321 011 0 000001111 1223445555555555544432 2
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q 009385 484 NDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGE 520 (536)
Q Consensus 484 GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~ 520 (536)
|++++|+.++++|++++|+ ..++..+|.++...|+.
T Consensus 291 gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~ 326 (372)
T 3ly7_A 291 GKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMN 326 (372)
T ss_dssp TCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCH
Confidence 4555555555555555543 34444555555555543
No 197
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.44 E-value=8.5e-07 Score=91.47 Aligned_cols=104 Identities=12% Similarity=-0.003 Sum_probs=95.5
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHH------
Q 009385 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAH-DYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLW------ 487 (536)
Q Consensus 415 dyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~G-D~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~e------ 487 (536)
.+++++.++.++|..+|++..+|++.+.++....+ +++++++++.++|+.+|.|..+|+..+.++...+ +++
T Consensus 104 ~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~-~~~~~~~~~ 182 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFS-TLGRISEAQ 182 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHH-HTTCCCHHH
T ss_pred hHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc-cccccchhh
Confidence 69999999999999999999999999988874327 8999999999999999999999999999887654 565
Q ss_pred --HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009385 488 --AAEETFLEAISADPTNSYYAANYANFLWNTGG 519 (536)
Q Consensus 488 --EAee~feKALeLDPdNpeal~NyA~~L~elGr 519 (536)
+++++++++++.+|.|..++++.+.++..+|+
T Consensus 183 ~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~ 216 (349)
T 3q7a_A 183 WGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPG 216 (349)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999886
No 198
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.38 E-value=1.1e-06 Score=91.92 Aligned_cols=103 Identities=10% Similarity=-0.083 Sum_probs=84.6
Q ss_pred cCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-----CCCCHH---HHHHHH
Q 009385 413 YADYFRTELLYQTGLAQ-----EPNDP---LLLANYAQFLYIVAHDYDRAEEYFKRAIAV-----EPPDAE---SFSKYA 476 (536)
Q Consensus 413 ~gdyeeAee~YqKALeL-----dPdn~---eAL~NLA~lL~e~~GD~deAEe~FeKALeL-----DPddae---AL~nLG 476 (536)
.++|++|+..|+++|++ .|+|+ .++.|+|.+|. .+|+|++|+.+++++|++ .|+|+. .+++||
T Consensus 300 ~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~-~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa 378 (429)
T 3qwp_A 300 HWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACI-NLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVG 378 (429)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHH
Confidence 37999999999999976 46776 56788888877 699999999999999986 477764 688999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHh-----CCCCHHH---HHHHHHHHHHc
Q 009385 477 SFLWRVRNDLWAAEETFLEAISA-----DPTNSYY---AANYANFLWNT 517 (536)
Q Consensus 477 ~~L~e~~GD~eEAee~feKALeL-----DPdNpea---l~NyA~~L~el 517 (536)
.+++.+ |++++|+.+|++|+++ -|++|.. +.+++.++.++
T Consensus 379 ~~~~~~-g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 379 KLQLHQ-GMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHT-TCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhc-CCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 988875 6999999999999985 7888875 45676666543
No 199
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.37 E-value=5.2e-07 Score=73.58 Aligned_cols=59 Identities=15% Similarity=0.075 Sum_probs=52.4
Q ss_pred hCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 464 VEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 464 LDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
.+|+++.+++++|.+++.. |++++|+.+|++|++++|+++.++.++|.++..+|+.+++
T Consensus 2 ~~p~~~~~~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A 60 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKH-DNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDA 60 (100)
T ss_dssp ---CCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred CCccCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHH
Confidence 4899999999999988874 6999999999999999999999999999999999997654
No 200
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.27 E-value=2.3e-06 Score=85.91 Aligned_cols=109 Identities=12% Similarity=-0.057 Sum_probs=93.8
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-C-HHHHHHHHHHHHHhcCCHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPP-D-AESFSKYASFLWRVRNDLWAAE 490 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPd-d-aeAL~nLG~~L~e~~GD~eEAe 490 (536)
.|+|++|.+.|..++..+|++. +++.+|.+++ ..+++++|+.+|++++...++ . ..+++++|.++... |++++|+
T Consensus 115 ~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~-~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~L-G~~~eAl 191 (282)
T 4f3v_A 115 QGNYADAMEALEAAPVAGSEHL-VAWMKAVVYG-AAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANL-ALFTEAE 191 (282)
T ss_dssp HTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHH-HTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHT-TCHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHH-HcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHC-CCHHHHH
Confidence 3899999999999999999999 9999998877 699999999999999875322 2 45899999988765 6999999
Q ss_pred HHHHHHHHhC--CC-CHHHHHHHHHHHHHcCCCcccc
Q 009385 491 ETFLEAISAD--PT-NSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 491 e~feKALeLD--Pd-Npeal~NyA~~L~elGr~E~cl 524 (536)
.+|++++... |. .+.+++++|.+|.++|+.+++.
T Consensus 192 ~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~ 228 (282)
T 4f3v_A 192 RRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAV 228 (282)
T ss_dssp HHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHH
Confidence 9999999654 65 6679999999999999986543
No 201
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.24 E-value=2.5e-06 Score=86.86 Aligned_cols=92 Identities=13% Similarity=0.035 Sum_probs=76.2
Q ss_pred CCCCHHHHHHHHHHHHHH----hC------CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHh----cCCHHHHHHHH
Q 009385 430 EPNDPLLLANYAQFLYIV----AH------DYDRAEEYFKRAIAVEPP--DAESFSKYASFLWRV----RNDLWAAEETF 493 (536)
Q Consensus 430 dPdn~eAL~NLA~lL~e~----~G------D~deAEe~FeKALeLDPd--daeAL~nLG~~L~e~----~GD~eEAee~f 493 (536)
+|+++++++..|...... .+ ...+|+..++||+++||+ +..+|..||.+++.. .|+.++|+++|
T Consensus 148 ~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~f 227 (301)
T 3u64_A 148 TRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAF 227 (301)
T ss_dssp CGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHH
Confidence 577788888877754321 12 468999999999999999 777999999887763 58999999999
Q ss_pred HHHHHhCCCC-HHHHHHHHHHHHHc-CCCc
Q 009385 494 LEAISADPTN-SYYAANYANFLWNT-GGED 521 (536)
Q Consensus 494 eKALeLDPdN-peal~NyA~~L~el-Gr~E 521 (536)
++|++++|+. ...++.||.+|... |+.+
T Consensus 228 erAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 228 EHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred HHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 9999999975 99999999999885 7654
No 202
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.23 E-value=5e-06 Score=69.29 Aligned_cols=63 Identities=24% Similarity=0.332 Sum_probs=57.8
Q ss_pred CCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQE-------PNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYAS 477 (536)
Q Consensus 414 gdyeeAee~YqKALeLd-------Pdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~ 477 (536)
++|.+|+.+|++|++.. +..+.++.+||.+++ ..|++++|..++++|++++|+|..++.+++.
T Consensus 19 ~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~n~~~ 88 (104)
T 2v5f_A 19 ADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLELDPEHQRANGNLKY 88 (104)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHhhHHH
Confidence 89999999999999974 456889999999988 6999999999999999999999999999984
No 203
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.93 E-value=6.4e-06 Score=80.78 Aligned_cols=109 Identities=12% Similarity=0.090 Sum_probs=82.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHH------
Q 009385 414 ADYFRTELLYQTGLAQEPNDPL-----------------LLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAE------ 470 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~e-----------------AL~NLA~lL~e~~GD~deAEe~FeKALeLDPddae------ 470 (536)
|+|++|++.|+++++.+|+... ++.++|.++. ..|++++|.++|++++.+.+....
T Consensus 18 ~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 96 (434)
T 4b4t_Q 18 KQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYV-TMGAKDKLREFIPHSTEYMMQFAKSKTVKV 96 (434)
T ss_dssp TCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHTHHHHHTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 7899999999999999887643 5788898877 689999999999999887766533
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCCcccc
Q 009385 471 SFSKYASFLWRVRNDLWAAEETFLEAISADPT------NSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 471 AL~nLG~~L~e~~GD~eEAee~feKALeLDPd------Npeal~NyA~~L~elGr~E~cl 524 (536)
+...+|.++. ..|++++|+.++++++...+. -...+.++|.++...|+++++.
T Consensus 97 ~~~~l~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 155 (434)
T 4b4t_Q 97 LKTLIEKFEQ-VPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSL 155 (434)
T ss_dssp HHHHHHHHCS-CCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHH
Confidence 3445565443 356899999999998876432 2456788899999998876554
No 204
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.85 E-value=2.3e-05 Score=65.35 Aligned_cols=59 Identities=14% Similarity=0.041 Sum_probs=53.2
Q ss_pred CCCCHHHHHHHHHHHHHhcCC--HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 465 EPPDAESFSKYASFLWRVRND--LWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 465 DPddaeAL~nLG~~L~e~~GD--~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+|+|++++..+|.+++...+. .++|+.++++|+++||+++.++..+|..+++.|+++++
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~A 62 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEA 62 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHH
Confidence 799999999999999765432 79999999999999999999999999999999998644
No 205
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.80 E-value=5.7e-05 Score=80.58 Aligned_cols=87 Identities=10% Similarity=0.034 Sum_probs=72.1
Q ss_pred ccCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-----CCCCHHH---HHHH
Q 009385 412 DYADYFRTELLYQTGLAQ-----EPNDP---LLLANYAQFLYIVAHDYDRAEEYFKRAIAV-----EPPDAES---FSKY 475 (536)
Q Consensus 412 d~gdyeeAee~YqKALeL-----dPdn~---eAL~NLA~lL~e~~GD~deAEe~FeKALeL-----DPddaeA---L~nL 475 (536)
+.|+|++|+.+|+++|++ .|+++ ..++|+|.+|. .+|++++|+.+|++|+++ .|+|+.. +.++
T Consensus 363 ~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~-~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l 441 (490)
T 3n71_A 363 YLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNW-HAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMR 441 (490)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 349999999999999987 46666 46889998887 699999999999999985 5888654 5677
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhC
Q 009385 476 ASFLWRVRNDLWAAEETFLEAISAD 500 (536)
Q Consensus 476 G~~L~e~~GD~eEAee~feKALeLD 500 (536)
+.++.+++ .+++|+..|++|.+..
T Consensus 442 ~~~~~e~~-~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 442 MQTEMELR-MFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 77776654 8999999999998754
No 206
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.77 E-value=0.00011 Score=66.17 Aligned_cols=93 Identities=14% Similarity=0.099 Sum_probs=80.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHhcCCHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAH---DYDRAEEYFKRAIAVE-P-PDAESFSKYASFLWRVRNDLWA 488 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~G---D~deAEe~FeKALeLD-P-ddaeAL~nLG~~L~e~~GD~eE 488 (536)
.....+++.|.+++..++....+.++||..|. ... +..+++..++..++.+ | ..-+.++.||..+++. |+|++
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv-~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~ykl-g~Y~~ 92 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLV-RTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRL-KEYEK 92 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHT-TSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHT-TCHHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHh-hhHHH
Confidence 46778889999999999999999999998776 344 3455999999999987 6 5678999999999886 69999
Q ss_pred HHHHHHHHHHhCCCCHHHHH
Q 009385 489 AEETFLEAISADPTNSYYAA 508 (536)
Q Consensus 489 Aee~feKALeLDPdNpeal~ 508 (536)
|..+++..|+++|+|.++..
T Consensus 93 A~~~~~~lL~~eP~n~QA~~ 112 (126)
T 1nzn_A 93 ALKYVRGLLQTEPQNNQAKE 112 (126)
T ss_dssp HHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHH
Confidence 99999999999999998754
No 207
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.77 E-value=0.00012 Score=67.82 Aligned_cols=101 Identities=14% Similarity=0.149 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHhccccccccccHHHHHHhcCccccccCccccCCHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHH
Q 009385 369 EEELNLWNSIVDEASQMQVTDESLDHETMERFVSPVTANIEADDYADYFRTELLYQTGLAQE-P-NDPLLLANYAQFLYI 446 (536)
Q Consensus 369 e~EvaLwnsmvaEA~~mQ~~d~~lD~ea~krlvspV~AeLepDd~gdyeeAee~YqKALeLd-P-dn~eAL~NLA~lL~e 446 (536)
.+++.-+..-..++.. . + ..+.++.=++.--+ +...+..++.+++.+++..++.+ | ++.++++++|..++
T Consensus 11 ~~~l~~~~~~y~~e~~--~-~-~~~~~~~F~ya~~L---v~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~- 82 (152)
T 1pc2_A 11 VEDLLKFEKKFQSEKA--A-G-SVSKSTQFEYAWCL---VRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY- 82 (152)
T ss_dssp HHHHHHHHHHHHHHHH--T-T-CCCHHHHHHHHHHH---HTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHc--c-C-CCcHHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHH-
Confidence 3455555555555432 1 2 24555544443322 22233468899999999999999 8 67999999999988
Q ss_pred HhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009385 447 VAHDYDRAEEYFKRAIAVEPPDAESFSKYAS 477 (536)
Q Consensus 447 ~~GD~deAEe~FeKALeLDPddaeAL~nLG~ 477 (536)
..++|++|.++++++|+++|+|..+....-.
T Consensus 83 kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ 113 (152)
T 1pc2_A 83 RLKEYEKALKYVRGLLQTEPQNNQAKELERL 113 (152)
T ss_dssp HTSCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 6999999999999999999999999776554
No 208
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.72 E-value=9.1e-05 Score=75.34 Aligned_cols=105 Identities=11% Similarity=0.054 Sum_probs=83.4
Q ss_pred CCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC----CHHHHHHH--HHHHHHh-cC
Q 009385 414 ADYFRTELLYQTGLAQEP--NDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPP----DAESFSKY--ASFLWRV-RN 484 (536)
Q Consensus 414 gdyeeAee~YqKALeLdP--dn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPd----daeAL~nL--G~~L~e~-~G 484 (536)
|++++|++++.++|..+| ++.+++.-+++++. ..|+.+.|.+.+++..+.+|+ +-.++.+| |++.... ++
T Consensus 114 g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L-~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~ 192 (310)
T 3mv2_B 114 GDLDKSLETCVEGIDNDEAEGTTELLLLAIEVAL-LNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKE 192 (310)
T ss_dssp TCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCc
Confidence 899999999999999997 88999998998877 699999999999999999994 23333444 4334333 23
Q ss_pred CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCCcc
Q 009385 485 DLWAAEETFLEAISADPT--NSYYAANYANFLWNTGGEDT 522 (536)
Q Consensus 485 D~eEAee~feKALeLDPd--Npeal~NyA~~L~elGr~E~ 522 (536)
++.+|..+|+++....|+ .+..++| ++..+|+.++
T Consensus 193 ~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~e 229 (310)
T 3mv2_B 193 TATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAE 229 (310)
T ss_dssp TTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHH
T ss_pred cHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHH
Confidence 899999999999888887 4556666 6888888654
No 209
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.68 E-value=0.00012 Score=81.17 Aligned_cols=105 Identities=19% Similarity=0.147 Sum_probs=89.6
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAE-EYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 415 dyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAE-e~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
..++....|++||...|.++.+|+.||.++. ..|+.++|. ..|++|+...|.+...+..++.+... .|++++|.+.|
T Consensus 324 ~~~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~-~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~-~~~~e~aR~iy 401 (679)
T 4e6h_A 324 HKARMTYVYMQAAQHVCFAPEIWFNMANYQG-EKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYEL-NTKIPEIETTI 401 (679)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH-HHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCCHHHHHHHH
Confidence 3557788999999999999999999999887 578989996 99999999999999999999987665 57999999999
Q ss_pred HHHHHh-----------CCC-----------CHHHHHHHHHHHHHcCCCc
Q 009385 494 LEAISA-----------DPT-----------NSYYAANYANFLWNTGGED 521 (536)
Q Consensus 494 eKALeL-----------DPd-----------Npeal~NyA~~L~elGr~E 521 (536)
++++.. .|. .+.++..|+.+..+.|+.+
T Consensus 402 ek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~ 451 (679)
T 4e6h_A 402 LSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLA 451 (679)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHH
Confidence 999985 253 3457888888888877654
No 210
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.68 E-value=4.1e-05 Score=80.47 Aligned_cols=78 Identities=6% Similarity=-0.115 Sum_probs=66.6
Q ss_pred hCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh-----CCCCHHH---HHHHH
Q 009385 448 AHDYDRAEEYFKRAIAV-----EPPDA---ESFSKYASFLWRVRNDLWAAEETFLEAISA-----DPTNSYY---AANYA 511 (536)
Q Consensus 448 ~GD~deAEe~FeKALeL-----DPdda---eAL~nLG~~L~e~~GD~eEAee~feKALeL-----DPdNpea---l~NyA 511 (536)
.|+|++|+..|+++|++ .|+|+ ..++++|.++..+ |+|++|+.+|++++++ -|++|.. +.|+|
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~-g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYM-QDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 57999999999999995 57876 4578999988775 7999999999999975 6777764 88999
Q ss_pred HHHHHcCCCccccCC
Q 009385 512 NFLWNTGGEDTCFPL 526 (536)
Q Consensus 512 ~~L~elGr~E~clpl 526 (536)
.+|+.+|+++++.++
T Consensus 390 ~~~~~qg~~~eA~~~ 404 (433)
T 3qww_A 390 RLYMGLENKAAGEKA 404 (433)
T ss_dssp HHHHHTTCHHHHHHH
T ss_pred HHHHhccCHHHHHHH
Confidence 999999999877654
No 211
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.63 E-value=7.2e-05 Score=73.32 Aligned_cols=108 Identities=8% Similarity=0.037 Sum_probs=85.4
Q ss_pred cCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEP------NDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAV------EPPDAESFSKYASFLW 480 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdP------dn~eAL~NLA~lL~e~~GD~deAEe~FeKALeL------DPddaeAL~nLG~~L~ 480 (536)
.+++++|+.+|++++...+ .-..++.++|.++. ..|++++|..++++++.. .|...+++..+|.++.
T Consensus 108 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (434)
T 4b4t_Q 108 PDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHY-QKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYH 186 (434)
T ss_dssp CSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHH-HccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Confidence 3899999999999998743 23678899999887 689999999999999986 4555789999999887
Q ss_pred HhcCCHHHHHHHHHHHHHhCC---CCH----HHHHHHHHHHHHcCCCcc
Q 009385 481 RVRNDLWAAEETFLEAISADP---TNS----YYAANYANFLWNTGGEDT 522 (536)
Q Consensus 481 e~~GD~eEAee~feKALeLDP---dNp----eal~NyA~~L~elGr~E~ 522 (536)
.. |++++|+.+|++|+.+.+ +.+ .++.++|.++...|++++
T Consensus 187 ~~-~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~ 234 (434)
T 4b4t_Q 187 KL-RNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKT 234 (434)
T ss_dssp HT-TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHH
T ss_pred Hh-CcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHH
Confidence 65 699999999999998754 332 235566666666666544
No 212
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.63 E-value=0.00012 Score=81.14 Aligned_cols=108 Identities=12% Similarity=0.159 Sum_probs=84.9
Q ss_pred cCCHHHHHHHHHHHHHh-----------CCC-----------CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-CCCCH
Q 009385 413 YADYFRTELLYQTGLAQ-----------EPN-----------DPLLLANYAQFLYIVAHDYDRAEEYFKRAIAV-EPPDA 469 (536)
Q Consensus 413 ~gdyeeAee~YqKALeL-----------dPd-----------n~eAL~NLA~lL~e~~GD~deAEe~FeKALeL-DPdda 469 (536)
.+++++|...|++++.. .|. ...+|..|+.+.. ..++.+.|...|.+|++. .+...
T Consensus 391 ~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~er-R~~~l~~AR~vf~~A~~~~~~~~~ 469 (679)
T 4e6h_A 391 NTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMK-RIQGLAASRKIFGKCRRLKKLVTP 469 (679)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHH-HHHCHHHHHHHHHHHHHTGGGSCT
T ss_pred hCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhcCCCCh
Confidence 37889999999999875 253 3557888887766 578889999999999887 44556
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009385 470 ESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGED 521 (536)
Q Consensus 470 eAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E 521 (536)
.++...|.+-+..+++++.|...|+++++..|+++.++..|+.+++..|+.+
T Consensus 470 ~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~ 521 (679)
T 4e6h_A 470 DIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEES 521 (679)
T ss_dssp HHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHH
Confidence 7777777666555556899999999999999999988888999888888754
No 213
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.61 E-value=0.00015 Score=86.74 Aligned_cols=94 Identities=13% Similarity=0.046 Sum_probs=71.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
+++++|.++++++ +.+.+|++||.++. ..|++++|+.+|.+| +|+.++.+.|.++.+ .|++++|+++|
T Consensus 1090 ~nldrAiE~Aerv-----n~p~vWsqLAKAql-~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~-lGkyEEAIeyL 1157 (1630)
T 1xi4_A 1090 GNLDRAYEFAERC-----NEPAVWSQLAKAQL-QKGMVKEAIDSYIKA-----DDPSSYMEVVQAANT-SGNWEELVKYL 1157 (1630)
T ss_pred hhHHHHHHHHHhc-----CCHHHHHHHHHHHH-hCCCHHHHHHHHHhc-----CChHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 5677777776654 77999999998877 689999999999886 889999999988766 46999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCC
Q 009385 494 LEAISADPTNSYYAANYANFLWNTGGE 520 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~elGr~ 520 (536)
++|++.+++. .+-..+|..|.++++.
T Consensus 1158 ~mArk~~~e~-~Idt~LafaYAKl~rl 1183 (1630)
T 1xi4_A 1158 QMARKKARES-YVETELIFALAKTNRL 1183 (1630)
T ss_pred HHHHhhcccc-cccHHHHHHHHhhcCH
Confidence 9999887543 2222355555555443
No 214
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.50 E-value=0.00043 Score=72.31 Aligned_cols=99 Identities=17% Similarity=0.038 Sum_probs=64.8
Q ss_pred HHHHhCCCCHHHHHHHHH--HHHHH--hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc--C-----CHHHHHHHH
Q 009385 425 TGLAQEPNDPLLLANYAQ--FLYIV--AHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVR--N-----DLWAAEETF 493 (536)
Q Consensus 425 KALeLdPdn~eAL~NLA~--lL~e~--~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~--G-----D~eEAee~f 493 (536)
++...-|.++.+|-.|-+ -+... ..++.+|..+|++|+++||+++.++..++.++.... + ..+.....+
T Consensus 185 r~~~~~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~ 264 (372)
T 3ly7_A 185 TLQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEI 264 (372)
T ss_dssp HHHHHSCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHhccCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHH
Confidence 455566777666554332 22211 234689999999999999999999998776554211 1 111111222
Q ss_pred H--HHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 494 L--EAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 494 e--KALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+ .++.++|.++.++..++..++..|+.+.+
T Consensus 265 ~a~~a~~~~~~~a~~~~alal~~l~~gd~d~A 296 (372)
T 3ly7_A 265 DNIVTLPELNNLSIIYQIKAVSALVKGKTDES 296 (372)
T ss_dssp HHHHTCGGGTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHhcccCCcCHHHHHHHHHHHHhCCCHHHH
Confidence 2 23467899999999999999988987654
No 215
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.46 E-value=0.00026 Score=71.97 Aligned_cols=98 Identities=16% Similarity=0.071 Sum_probs=79.9
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 009385 419 TELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEP--PDAESFSKYASFLWRVRNDLWAAEETFLEA 496 (536)
Q Consensus 419 Aee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDP--ddaeAL~nLG~~L~e~~GD~eEAee~feKA 496 (536)
|+..+++.++..+.+..++..+|.++. ..|++++|++.+.+.|..+| ++.+++..++.++.. .|+.+.|++.+++.
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~-~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~-~~r~d~A~k~l~~~ 162 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQA-ILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALL-NNNVSTASTIFDNY 162 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHH-HcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHH-CCCHHHHHHHHHHH
Confidence 678888888877677777788898887 68999999999999999997 889999999988876 47999999999999
Q ss_pred HHhCCC----CHHHHHHH--HHHHHHcC
Q 009385 497 ISADPT----NSYYAANY--ANFLWNTG 518 (536)
Q Consensus 497 LeLDPd----Npeal~Ny--A~~L~elG 518 (536)
.+.+|+ +-.++.++ +++....|
T Consensus 163 ~~~~~d~~~~~d~~l~~Laea~v~l~~g 190 (310)
T 3mv2_B 163 TNAIEDTVSGDNEMILNLAESYIKFATN 190 (310)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCccccccchHHHHHHHHHHHHHHhC
Confidence 999993 22234444 44466666
No 216
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.45 E-value=0.00021 Score=74.71 Aligned_cols=79 Identities=5% Similarity=-0.069 Sum_probs=66.9
Q ss_pred HhCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh-----CCCCHHH---HHHH
Q 009385 447 VAHDYDRAEEYFKRAIAV-----EPPDA---ESFSKYASFLWRVRNDLWAAEETFLEAISA-----DPTNSYY---AANY 510 (536)
Q Consensus 447 ~~GD~deAEe~FeKALeL-----DPdda---eAL~nLG~~L~e~~GD~eEAee~feKALeL-----DPdNpea---l~Ny 510 (536)
.+|++++|++.|+++|++ .|+|+ ..++++|.++..+ |++++|+.++++++++ -|++|.. ++|+
T Consensus 299 ~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~-g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nL 377 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINL-GLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKV 377 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHH
Confidence 479999999999999985 57776 5688899888775 6999999999999975 5778764 8899
Q ss_pred HHHHHHcCCCccccCC
Q 009385 511 ANFLWNTGGEDTCFPL 526 (536)
Q Consensus 511 A~~L~elGr~E~clpl 526 (536)
|.+|+.+|+++++.++
T Consensus 378 a~~~~~~g~~~eA~~~ 393 (429)
T 3qwp_A 378 GKLQLHQGMFPQAMKN 393 (429)
T ss_dssp HHHHHHTTCHHHHHHH
T ss_pred HHHHHhcCCHHHHHHH
Confidence 9999999998876654
No 217
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.31 E-value=0.0014 Score=69.27 Aligned_cols=107 Identities=12% Similarity=0.177 Sum_probs=82.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHH----------------------------------------HHHHhCCHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQF----------------------------------------LYIVAHDYDR 453 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~l----------------------------------------L~e~~GD~de 453 (536)
++.++|...|++|+.. |.+..++..|+.+ +. ..++.++
T Consensus 227 ~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~-r~~~~~~ 304 (493)
T 2uy1_A 227 GQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVL-KKRGLEL 304 (493)
T ss_dssp TCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHH-HHHCHHH
T ss_pred CCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHH-HcCCHHH
Confidence 6778888888888888 8776666555543 22 2567899
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 454 AEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 454 AEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
|...|++| +..+.....+...|.+-+..+++++.|...|++|++.-|+++..+..|+.++...|+.+.+
T Consensus 305 AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~a 373 (493)
T 2uy1_A 305 FRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENA 373 (493)
T ss_dssp HHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 99999999 4444466777777877776666899999999999999999999888899988888876544
No 218
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.05 E-value=0.0036 Score=66.06 Aligned_cols=100 Identities=13% Similarity=0.073 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-----------------
Q 009385 416 YFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASF----------------- 478 (536)
Q Consensus 416 yeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~----------------- 478 (536)
.++....|+++|...|.++.+|.+|+.++. ..|+.++|...|++|+.. |.+...+..++.+
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~-~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~ 272 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLI-GIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMG 272 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhh
Confidence 567888999999999999999999999877 689999999999999999 9997766666543
Q ss_pred -----------------------HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009385 479 -----------------------LWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGG 519 (536)
Q Consensus 479 -----------------------L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr 519 (536)
+... ++.++|...|++| +..+.....+..+|.+.+..|+
T Consensus 273 ~~~~~~~~~~~~~~~lw~~y~~~~~r~-~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~ 334 (493)
T 2uy1_A 273 EAESAEKVFSKELDLLRINHLNYVLKK-RGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATG 334 (493)
T ss_dssp --------CHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHC
T ss_pred ccchhhhhcccccHHHHHHHHHHHHHc-CCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCC
Confidence 1122 3688899999999 4333355566666766666553
No 219
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.95 E-value=0.0018 Score=69.10 Aligned_cols=93 Identities=10% Similarity=0.001 Sum_probs=65.5
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
|+|.+|++.|++| +++..|.....++. ..|+++.|..+..+ |..+|++.. .+..++ +..|++++|+.++
T Consensus 162 g~yq~AVea~~KA-----~~~~~Wk~v~~aCv-~~~ef~lA~~~~l~-L~~~ad~l~---~lv~~Y-ek~G~~eEai~lL 230 (449)
T 1b89_A 162 GEYQAAVDGARKA-----NSTRTWKEVCFACV-DGKEFRLAQMCGLH-IVVHADELE---ELINYY-QDRGYFEELITML 230 (449)
T ss_dssp TCHHHHHHHHHHH-----TCHHHHHHHHHHHH-HTTCHHHHHHTTTT-TTTCHHHHH---HHHHHH-HHTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHc-----CCchhHHHHHHHHH-HcCcHHHHHHHHHH-HHhCHhhHH---HHHHHH-HHCCCHHHHHHHH
Confidence 6677777777777 46666666665555 46777777666665 334554433 344444 4567999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHc
Q 009385 494 LEAISADPTNSYYAANYANFLWNT 517 (536)
Q Consensus 494 eKALeLDPdNpeal~NyA~~L~el 517 (536)
++++.+++.+..++..+|.++.+-
T Consensus 231 e~aL~le~ah~~~ftel~il~~ky 254 (449)
T 1b89_A 231 EAALGLERAHMGMFTELAILYSKF 254 (449)
T ss_dssp HHHTTSTTCCHHHHHHHHHHHHTT
T ss_pred HHHhCCcHHHHHHHHHHHHHHHhc
Confidence 999999999999888888877653
No 220
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.92 E-value=0.0014 Score=78.69 Aligned_cols=110 Identities=9% Similarity=0.066 Sum_probs=81.8
Q ss_pred CCHHHHHHHHHHHHHhCC-------------------------CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC
Q 009385 414 ADYFRTELLYQTGLAQEP-------------------------NDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD 468 (536)
Q Consensus 414 gdyeeAee~YqKALeLdP-------------------------dn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd 468 (536)
|++++|+++|++|...++ .+++-+..++..| +..|.+++|+.+|+++|.++|.|
T Consensus 1235 ge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yY-e~~G~feEAI~LlE~aL~LeraH 1313 (1630)
T 1xi4_A 1235 GEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYY-QDRGYFEELITMLEAALGLERAH 1313 (1630)
T ss_pred CCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHH-HHcCCHHHHHHHHHHHhccChhH
Confidence 678888888888744333 1333444444444 36899999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHhCC-----CCHHHHHHHHHHHHHcCCCcccc
Q 009385 469 AESFSKYASFLWRVR-NDLWAAEETFLEAISADP-----TNSYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 469 aeAL~nLG~~L~e~~-GD~eEAee~feKALeLDP-----dNpeal~NyA~~L~elGr~E~cl 524 (536)
...+..||.++.+.+ +++.++.++|...+.+.| .++..+..+..+|.+.|+++.+.
T Consensus 1314 ~gmftELaiLyaKy~peklmEhlk~f~~rini~k~~r~~e~~~lW~elv~LY~~~~e~dnA~ 1375 (1630)
T 1xi4_A 1314 MGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAI 1375 (1630)
T ss_pred hHHHHHHHHHHHhCCHHHHHHHHHHHHHhcccchHhHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 999988888776543 467888889998888877 77777888888888888776554
No 221
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.80 E-value=0.00068 Score=72.33 Aligned_cols=106 Identities=8% Similarity=0.095 Sum_probs=87.4
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc-CCHHHHH
Q 009385 412 DYADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVR-NDLWAAE 490 (536)
Q Consensus 412 d~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~-GD~eEAe 490 (536)
+.++++.|..+..+ |..+|++.. .+..+|. ..|.+++|..+|+++|.+++.|..++..||.++.+.+ +++.+++
T Consensus 189 ~~~ef~lA~~~~l~-L~~~ad~l~---~lv~~Ye-k~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl 263 (449)
T 1b89_A 189 DGKEFRLAQMCGLH-IVVHADELE---ELINYYQ-DRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHL 263 (449)
T ss_dssp HTTCHHHHHHTTTT-TTTCHHHHH---HHHHHHH-HTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcCcHHHHHHHHHH-HHhCHhhHH---HHHHHHH-HCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 34899999988886 446666544 4554444 7999999999999999999999999999998877543 4678889
Q ss_pred HHHHHHHHhCC-----CCHHHHHHHHHHHHHcCCCcc
Q 009385 491 ETFLEAISADP-----TNSYYAANYANFLWNTGGEDT 522 (536)
Q Consensus 491 e~feKALeLDP-----dNpeal~NyA~~L~elGr~E~ 522 (536)
+.|...+.+.| .++..+..+..+|.+.++.|.
T Consensus 264 ~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~~e~d~ 300 (449)
T 1b89_A 264 ELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDN 300 (449)
T ss_dssp HHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHTTCHHH
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhchHHH
Confidence 99999999988 888889999999999998764
No 222
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.55 E-value=0.0064 Score=56.95 Aligned_cols=88 Identities=15% Similarity=0.126 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHH
Q 009385 417 FRTELLYQTGLAQEPN--------DPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWA 488 (536)
Q Consensus 417 eeAee~YqKALeLdPd--------n~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eE 488 (536)
++-.+.|++|+..-|- ...+|..||.+ . ..+|.++|...|+.++.++...+.+|..+|.|-..+ |++.+
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~-ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRq-gnl~k 112 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-K-AIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQ-GNVKK 112 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-H-HHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHT-TCHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-H-HhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-ccHHH
Confidence 7888999999999875 35678888865 3 469999999999999999999999999999988764 69999
Q ss_pred HHHHHHHHHHhCCCCHHHH
Q 009385 489 AEETFLEAISADPTNSYYA 507 (536)
Q Consensus 489 Aee~feKALeLDPdNpeal 507 (536)
|.+.+.+|+.+.|...+.+
T Consensus 113 ARkILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 113 SKQLLQKAVERGAVPLEML 131 (161)
T ss_dssp HHHHHHHHHHTTCBCHHHH
T ss_pred HHHHHHHHhccCCCcHHHH
Confidence 9999999999999987753
No 223
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.43 E-value=0.0098 Score=54.81 Aligned_cols=93 Identities=10% Similarity=-0.064 Sum_probs=72.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIV--AHDYDRAEEYFKRAIAVEPP-DAESFSKYASFLWRVRNDLWAAE 490 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~--~GD~deAEe~FeKALeLDPd-daeAL~nLG~~L~e~~GD~eEAe 490 (536)
.+.....+-|.+-+. +.-.+.+.++||..|... ..+..+++..++..++.+|. .-+-++.+|..+++. |+|++|.
T Consensus 20 eeL~~lr~qY~~E~~-~~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl-~~Y~~Ar 97 (144)
T 1y8m_A 20 QQLEILRQQVVSEGG-PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKL-GEYSMAK 97 (144)
T ss_dssp HHHHHHHHHHHHTTS-TTSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTT-TCHHHHH
T ss_pred HHHHHHHHHHHHhcc-CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHh-hhHHHHH
Confidence 355556666655422 355789999999877631 23567899999999999995 567889999888875 6999999
Q ss_pred HHHHHHHHhCCCCHHHHH
Q 009385 491 ETFLEAISADPTNSYYAA 508 (536)
Q Consensus 491 e~feKALeLDPdNpeal~ 508 (536)
.+.+..|+++|+|.++..
T Consensus 98 ~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 98 RYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp HHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHhcCCCcHHHHH
Confidence 999999999999998754
No 224
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.22 E-value=0.018 Score=53.89 Aligned_cols=59 Identities=12% Similarity=0.144 Sum_probs=53.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFS 473 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~ 473 (536)
+|.++|.+.|+.++.+....+.+|..+|++-. .+|+.++|.+.+.+|+.+.|...+.+.
T Consensus 74 ~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEi-Rqgnl~kARkILg~AiG~~~k~~~~le 132 (161)
T 4h7y_A 74 QEPDDARDYFQMARANCKKFAFVHISFAQFEL-SQGNVKKSKQLLQKAVERGAVPLEMLE 132 (161)
T ss_dssp HCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCBCHHHHH
T ss_pred cCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcccHHHHHHHHHHHhccCCCcHHHHH
Confidence 58889999999999998889999999999877 699999999999999999999887654
No 225
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.14 E-value=0.021 Score=52.07 Aligned_cols=94 Identities=10% Similarity=-0.072 Sum_probs=72.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIV--AHDYDRAEEYFKRAIAVEPP-DAESFSKYASFLWRVRNDLWAAE 490 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~--~GD~deAEe~FeKALeLDPd-daeAL~nLG~~L~e~~GD~eEAe 490 (536)
.+....++-|++=+.-.| .+.+.++||..|... ..+..+++..++..++.+|. .-+-++.+|..+++. |+|++|.
T Consensus 21 eeL~~l~~qy~~E~~~~v-s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~ykl-gdY~~Ar 98 (134)
T 3o48_A 21 QQLEILRQQVVSEGGPTA-TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKL-GEYSMAK 98 (134)
T ss_dssp HHHHHHHHHHHHTTGGGS-CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH-TCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCC-ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHh-hhHHHHH
Confidence 455666666666442223 578999999877632 22566899999999999995 478899999888886 5999999
Q ss_pred HHHHHHHHhCCCCHHHHHH
Q 009385 491 ETFLEAISADPTNSYYAAN 509 (536)
Q Consensus 491 e~feKALeLDPdNpeal~N 509 (536)
.+.+..++++|+|.++..-
T Consensus 99 ~y~d~lL~~eP~N~QA~~L 117 (134)
T 3o48_A 99 RYVDTLFEHERNNKQVGAL 117 (134)
T ss_dssp HHHHHHHTTCTTCHHHHHH
T ss_pred HHHHHHHhhCCCCHHHHHH
Confidence 9999999999999987543
No 226
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.06 E-value=0.0074 Score=54.31 Aligned_cols=65 Identities=15% Similarity=0.147 Sum_probs=56.8
Q ss_pred ccCCHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009385 412 DYADYFRTELLYQTGLAQE-P-NDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYAS 477 (536)
Q Consensus 412 d~gdyeeAee~YqKALeLd-P-dn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~ 477 (536)
...+..+++.+++..+..+ | ...+.++.+|..++ ..|+|++|..+++..|+++|+|..|......
T Consensus 50 ~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~y-klg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~ 116 (126)
T 1nzn_A 50 YNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY-RLKEYEKALKYVRGLLQTEPQNNQAKELERL 116 (126)
T ss_dssp SHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 3467778999999999987 6 67899999999888 6999999999999999999999999776543
No 227
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.01 E-value=0.02 Score=53.94 Aligned_cols=99 Identities=18% Similarity=0.094 Sum_probs=70.8
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHH---------HHHHHHHHHHHHhCCHHHHHHHHHHHHHhC---C--------------
Q 009385 413 YADYFRTELLYQTGLAQEPNDPL---------LLANYAQFLYIVAHDYDRAEEYFKRAIAVE---P-------------- 466 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~e---------AL~NLA~lL~e~~GD~deAEe~FeKALeLD---P-------------- 466 (536)
.+.|+-|+..+..++.+..++++ ++..+|.+++ ..++|.+|+.+|++||++. |
T Consensus 33 ~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf-~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss 111 (167)
T 3ffl_A 33 AGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLF-HDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSAS 111 (167)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHCC---------------
T ss_pred hhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCC
Confidence 37899999999887777544444 7888999999 6999999999999997642 1
Q ss_pred --------CCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 009385 467 --------PDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFL 514 (536)
Q Consensus 467 --------ddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L 514 (536)
.+.+..+.++.++.+. +++++|+..++.. -..-..+.+...+|.+|
T Consensus 112 ~p~s~~~~~e~Elkykia~C~~~l-~~~~~Ai~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 112 TPQSQCLPSEIEVKYKLAECYTVL-KQDKDAIAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp -----CCCCHHHHHHHHHHHHHHT-TCHHHHHHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred CcccccccchHHHHHHHHHHHHHH-CCHHHHHHHHhcC-CchhcCHHHHHHHHHHh
Confidence 1236778888888776 4889988876543 11234455555555543
No 228
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.81 E-value=0.29 Score=51.84 Aligned_cols=148 Identities=17% Similarity=0.148 Sum_probs=101.9
Q ss_pred ChHHHHHHHHHHHHHHhccccccccccHHHHHHhcCcc-ccc-c-CccccCCHHHHHHHHHHHHHhC--CCCHHHHHHHH
Q 009385 367 DREEELNLWNSIVDEASQMQVTDESLDHETMERFVSPV-TAN-I-EADDYADYFRTELLYQTGLAQE--PNDPLLLANYA 441 (536)
Q Consensus 367 ~~e~EvaLwnsmvaEA~~mQ~~d~~lD~ea~krlvspV-~Ae-L-epDd~gdyeeAee~YqKALeLd--Pdn~eAL~NLA 441 (536)
+.++-+.+|..|.++ +...|..++.-++... .+. . +....++.++|.+.|++..+.. | |...|+.+-
T Consensus 41 ~~~~A~~lf~~M~~~-------Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~P-d~~tyn~lI 112 (501)
T 4g26_A 41 DVLEALRLYDEARRN-------GVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVP-NEATFTNGA 112 (501)
T ss_dssp CHHHHHHHHHHHHHH-------TCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCC-CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-------CCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCC-CHHHHHHHH
Confidence 455667778777654 3456666666665432 111 0 1112356889999999887763 4 667777777
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcC
Q 009385 442 QFLYIVAHDYDRAEEYFKRAIAVE-PPDAESFSKYASFLWRVRNDLWAAEETFLEAISA--DPTNSYYAANYANFLWNTG 518 (536)
Q Consensus 442 ~lL~e~~GD~deAEe~FeKALeLD-PddaeAL~nLG~~L~e~~GD~eEAee~feKALeL--DPdNpeal~NyA~~L~elG 518 (536)
..+. ..|++++|++.|++..+.. ..|...|+.+=..+.. .|++++|.++|++..+. .|+ ...+..+-..+.+.|
T Consensus 113 ~~~~-~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~-~g~~~~A~~l~~~M~~~G~~Pd-~~ty~~Li~~~~~~g 189 (501)
T 4g26_A 113 RLAV-AKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCR-KGDADKAYEVDAHMVESEVVPE-EPELAALLKVSMDTK 189 (501)
T ss_dssp HHHH-HHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHTT
T ss_pred HHHH-hcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHH-CCCHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHHhhCC
Confidence 6777 5899999999999988753 3366677766666665 47999999999998875 454 445677888888999
Q ss_pred CCccccC
Q 009385 519 GEDTCFP 525 (536)
Q Consensus 519 r~E~clp 525 (536)
+.++++-
T Consensus 190 ~~d~A~~ 196 (501)
T 4g26_A 190 NADKVYK 196 (501)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 8776543
No 229
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=95.68 E-value=0.025 Score=51.50 Aligned_cols=65 Identities=12% Similarity=0.004 Sum_probs=57.3
Q ss_pred ccCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009385 412 DYADYFRTELLYQTGLAQEPN-DPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYAS 477 (536)
Q Consensus 412 d~gdyeeAee~YqKALeLdPd-n~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~ 477 (536)
+..+..+++.+++..++.+|. ..+.++.+|..++ ..|+|++|.++.+++|+++|+|..|......
T Consensus 55 ~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~y-klgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 55 DVNDERLGVKILTDIYKEAESRRRECLYYLTIGCY-KLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp CHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHH-HhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 446888999999999999994 5789999998888 6999999999999999999999999776554
No 230
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.65 E-value=0.1 Score=52.55 Aligned_cols=63 Identities=19% Similarity=0.309 Sum_probs=57.5
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYA 476 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG 476 (536)
.++.++|+...+..|+.+|.|......|.++|+ ..|++++|.+.++-+.+++|+.......|-
T Consensus 10 ~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLc-v~G~w~RA~~QL~~~a~l~p~~~~~a~~yr 72 (273)
T 1zbp_A 10 EGQLQQALELLIEAIKASPKDASLRSSFIELLC-IDGDFERADEQLMQSIKLFPEYLPGASQLR 72 (273)
T ss_dssp TTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCchhhHHHHHHH
Confidence 389999999999999999999999999999999 699999999999999999999987655543
No 231
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.57 E-value=0.045 Score=58.90 Aligned_cols=65 Identities=18% Similarity=0.142 Sum_probs=41.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFL 479 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L 479 (536)
..+..|..+|.+|+.++|++...++.+|.+.. ..|+.-+|.-+|-|+|.....++.+..|+..++
T Consensus 166 ~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~-~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f 230 (497)
T 1ya0_A 166 NQTSQAESYYRHAAQLVPSNGQPYNQLAILAS-SKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp TCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHH-HTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCchHHHHHHHHh-cccccHHHHHHHHHHHhcCCCChhHHHHHHHHH
Confidence 34556666666666666666666666665444 456666666666666666666666666666544
No 232
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.05 E-value=0.068 Score=49.23 Aligned_cols=65 Identities=12% Similarity=0.000 Sum_probs=56.8
Q ss_pred ccCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009385 412 DYADYFRTELLYQTGLAQEP-NDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYAS 477 (536)
Q Consensus 412 d~gdyeeAee~YqKALeLdP-dn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~ 477 (536)
...+..+++.+++..+..+| +..+.++.+|..++ ..|+|++|.++.+..|+++|+|..|......
T Consensus 54 ~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~y-kl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 54 DVNDERLGVKILTDIYKEAESRRRECLYYLTIGCY-KLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp SHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHH-HhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 34688899999999999999 46788999998888 6999999999999999999999998765543
No 233
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=94.06 E-value=0.095 Score=49.33 Aligned_cols=81 Identities=9% Similarity=-0.013 Sum_probs=63.4
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHhCCCCHH---------HHHHHHHHHHHhcCCHHHHHHHHHHHHHhC---CCC------
Q 009385 442 QFLYIVAHDYDRAEEYFKRAIAVEPPDAE---------SFSKYASFLWRVRNDLWAAEETFLEAISAD---PTN------ 503 (536)
Q Consensus 442 ~lL~e~~GD~deAEe~FeKALeLDPddae---------AL~nLG~~L~e~~GD~eEAee~feKALeLD---PdN------ 503 (536)
..++ ..+.|+.|+.....++.+..++++ ++..+|..++.. ++|.+|+.+|++||++. |.+
T Consensus 28 k~L~-d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~-~eyrrA~~~y~qALq~~k~l~k~~s~~~~ 105 (167)
T 3ffl_A 28 RDMA-AAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHD-KEYRNAVSKYTMALQQKKALSKTSKVRPS 105 (167)
T ss_dssp HHHH-HTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHCC---------
T ss_pred HHHH-HhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 3455 479999999999998887655554 889999999985 59999999999997642 222
Q ss_pred ----------------HHHHHHHHHHHHHcCCCcccc
Q 009385 504 ----------------SYYAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 504 ----------------peal~NyA~~L~elGr~E~cl 524 (536)
.+..+..|.++.++|+.+.++
T Consensus 106 ~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai 142 (167)
T 3ffl_A 106 TGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAI 142 (167)
T ss_dssp -----------CCCCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred ccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHH
Confidence 267899999999999876554
No 234
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.01 E-value=0.14 Score=57.84 Aligned_cols=106 Identities=12% Similarity=-0.018 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HH-hCCHHHHHHHHHHHHH--------hCCCCH----------HHHHHH
Q 009385 416 YFRTELLYQTGLAQEPNDPLLLANYAQFLY-IV-AHDYDRAEEYFKRAIA--------VEPPDA----------ESFSKY 475 (536)
Q Consensus 416 yeeAee~YqKALeLdPdn~eAL~NLA~lL~-e~-~GD~deAEe~FeKALe--------LDPdda----------eAL~nL 475 (536)
++.|+.++++..+.+|.+...+.. +.+.. .. ..+--+|.....++++ +.+.+. ..+..=
T Consensus 265 ~~~a~~~le~L~~~~p~~~~~~~~-~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Q 343 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDPIHDIYYKT-AMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQ 343 (754)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHH-HHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCchhHHHHH-HHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHH
Confidence 678999999999999977544432 22211 11 1234467777777764 234443 234444
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009385 476 ASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 476 G~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~elGr~E~c 523 (536)
+.||.. +|+++-|+++.++|+.+.|.....++.|+.+|..+|++|.+
T Consensus 344 a~FLl~-K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~A 390 (754)
T 4gns_B 344 TNFLLN-RGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKA 390 (754)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhc-cCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHH
Confidence 666665 67999999999999999999999999999999999998754
No 235
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.90 E-value=0.3 Score=51.85 Aligned_cols=107 Identities=11% Similarity=0.101 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHH--------HHhCCCCHHHHHHHHHH-------
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRA--------IAVEPPDAESFSKYASF------- 478 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKA--------LeLDPddaeAL~nLG~~------- 478 (536)
+++++|.+.+ ...+++..|.++|..+. ..++++.|+++|.++ |....++.+.+..++..
T Consensus 666 ~~~~~A~~~~-----~~~~~~~~W~~la~~al-~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~ 739 (814)
T 3mkq_A 666 GQLTLARDLL-----TDESAEMKWRALGDASL-QRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKF 739 (814)
T ss_dssp TCHHHHHHHH-----TTCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHH-----HhhCcHhHHHHHHHHHH-HcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCch
Confidence 5666665553 34578999999998877 699999999999986 22234555544444322
Q ss_pred -----HHHhcCCHHHHHHHHHH------HHH----hCCCC---HHHHHHHHHHHHHcCCCccccCC
Q 009385 479 -----LWRVRNDLWAAEETFLE------AIS----ADPTN---SYYAANYANFLWNTGGEDTCFPL 526 (536)
Q Consensus 479 -----L~e~~GD~eEAee~feK------ALe----LDPdN---peal~NyA~~L~elGr~E~clpl 526 (536)
++...|++++|+++|.+ |+. ..|.. +.+...|+.-|...|+.+.+--+
T Consensus 740 ~~A~~~~~~~g~~~~a~~~~~~~~~~~~A~~lA~~~~~~~~~i~~~~~~~~~~L~~~~~~~~a~~l 805 (814)
T 3mkq_A 740 NLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGDNEVNDIVTKWKENLILNGKNTVSERV 805 (814)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTCHHHHTTB
T ss_pred HHHHHHHHHcCCHHHHHHHHHHcCChHHHHHHHHHhCCChHHHHHHHHHHHHHHHhccchhHHHhh
Confidence 22224678888877755 333 34544 35677888888888865433333
No 236
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.49 E-value=0.17 Score=54.53 Aligned_cols=80 Identities=14% Similarity=0.208 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 009385 436 LLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLW 515 (536)
Q Consensus 436 AL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~ 515 (536)
.+..+|.+.. ....++.|..+|++|+.+.|++...++.||.+... .|+.-+|.-+|-|++....-.+.+..|+..++-
T Consensus 154 ~l~~LGDL~R-Y~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~-~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 154 CLVHLGDIAR-YRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS-KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHH-TTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHcccHHH-HHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhc-ccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 6778898766 68899999999999999999999999999986655 578999999999999988888999999998876
Q ss_pred Hc
Q 009385 516 NT 517 (536)
Q Consensus 516 el 517 (536)
..
T Consensus 232 ~~ 233 (497)
T 1ya0_A 232 KA 233 (497)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 237
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=91.75 E-value=2.9 Score=44.21 Aligned_cols=120 Identities=10% Similarity=-0.003 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHhccccccccccHHHHHHhcCccccccCccccCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHH
Q 009385 370 EELNLWNSIVDEASQMQVTDESLDHETMERFVSPVTANIEADDYADYFRTELLYQTGLAQ--EPNDPLLLANYAQFLYIV 447 (536)
Q Consensus 370 ~EvaLwnsmvaEA~~mQ~~d~~lD~ea~krlvspV~AeLepDd~gdyeeAee~YqKALeL--dPdn~eAL~NLA~lL~e~ 447 (536)
.-..+|+.|.++ +...|..++.-++.... ..|++++|.++|++..+. .| |...|+.+-..+. .
T Consensus 88 ~A~~lf~~M~~~-------G~~Pd~~tyn~lI~~~~------~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~-~ 152 (501)
T 4g26_A 88 RGFDIFKQMIVD-------KVVPNEATFTNGARLAV------AKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFC-R 152 (501)
T ss_dssp HHHHHHHHHHHT-------TCCCCHHHHHHHHHHHH------HHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHh-------CCCCCHHHHHHHHHHHH------hcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHH-H
Confidence 445577776653 33456666665554331 228999999999998876 45 5666666655666 6
Q ss_pred hCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--CCCCHH
Q 009385 448 AHDYDRAEEYFKRAIAVE-PPDAESFSKYASFLWRVRNDLWAAEETFLEAISA--DPTNSY 505 (536)
Q Consensus 448 ~GD~deAEe~FeKALeLD-PddaeAL~nLG~~L~e~~GD~eEAee~feKALeL--DPdNpe 505 (536)
.|+.++|.+.|++..+.. ..|...|+.+-..+... |+.++|.++|++..+. .|+...
T Consensus 153 ~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~-g~~d~A~~ll~~Mr~~g~~ps~~T 212 (501)
T 4g26_A 153 KGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDT-KNADKVYKTLQRLRDLVRQVSKST 212 (501)
T ss_dssp TTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHTSSBCHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhC-CCHHHHHHHHHHHHHhCCCcCHHH
Confidence 899999999999998864 33566777777777764 7999999999998774 565443
No 238
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=91.21 E-value=2.6 Score=43.09 Aligned_cols=61 Identities=5% Similarity=-0.058 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009385 436 LLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAIS 498 (536)
Q Consensus 436 AL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALe 498 (536)
++..++..+. ..|++++|+..+++++..+|-+-.++..+-.+|+. .|+..+|++.|++..+
T Consensus 173 a~~~~~~~~l-~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~-~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 173 AHTAKAEAEI-ACGRASAVIAELEALTFEHPYREPLWTQLITAYYL-SDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHT-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 3444555555 58999999999999999999999999888887776 4799999999988755
No 239
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=90.50 E-value=1.1 Score=45.07 Aligned_cols=66 Identities=23% Similarity=0.251 Sum_probs=58.3
Q ss_pred HhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 009385 447 VAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANF 513 (536)
Q Consensus 447 ~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~ 513 (536)
..|++++|++.....|+.+|.|++....|-.+|+. .|++++|.+-++-+.+++|+.......|-.+
T Consensus 9 ~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv-~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~l 74 (273)
T 1zbp_A 9 SEGQLQQALELLIEAIKASPKDASLRSSFIELLCI-DGDFERADEQLMQSIKLFPEYLPGASQLRHL 74 (273)
T ss_dssp TTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhCchhhHHHHHHHHH
Confidence 47999999999999999999999999999998886 4799999999999999999987765555443
No 240
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=85.87 E-value=2 Score=48.67 Aligned_cols=59 Identities=19% Similarity=0.098 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 009385 436 LLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEA 496 (536)
Q Consensus 436 AL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKA 496 (536)
++.--+.+|. .+|+++-|+++.++|+.+.|.+-..|+.|+.+|... ||++.|+-.+.-+
T Consensus 339 LL~~Qa~FLl-~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l-~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLL-NRGDYELALGVSNTSTELALDSFESWYNLARCHIKK-EEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHT-TCHHHHHHHHHHS
T ss_pred HHHHHHHHHh-ccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHh-ccHHHHHHHHhcC
Confidence 4444566776 589999999999999999999999999999999875 6999999665543
No 241
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=80.52 E-value=13 Score=34.93 Aligned_cols=42 Identities=12% Similarity=-0.024 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRA 461 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKA 461 (536)
|+++.|.+..+.. ++..-|..+|.... ..|+++-|+++|.++
T Consensus 19 g~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL-~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 19 GNLDAALDEAKKL-----NDSITWERLIQEAL-AQGNASLAEMIYQTQ 60 (177)
T ss_dssp TCHHHHHHHHHHH-----CCHHHHHHHHHHHH-HTTCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHh-----CCHHHHHHHHHHHH-HcCChHHHHHHHHHh
Confidence 7888888776554 67888999998766 589999999998876
No 242
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=75.97 E-value=9 Score=40.56 Aligned_cols=76 Identities=16% Similarity=0.073 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHH--------HHhCCCCH
Q 009385 433 DPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEA--------ISADPTNS 504 (536)
Q Consensus 433 n~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKA--------LeLDPdNp 504 (536)
++...+.++ . ..|++++|.++.+ ..++...|..+|..+.. .++++.|+.+|.++ |....++.
T Consensus 654 ~~~~~f~~~---l-~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~-~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~ 723 (814)
T 3mkq_A 654 DQDQKFELA---L-KVGQLTLARDLLT-----DESAEMKWRALGDASLQ-RFNFKLAIEAFTNAHDLESLFLLHSSFNNK 723 (814)
T ss_dssp CHHHHHHHH---H-HHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHTCHHHHHHHHHHTTCH
T ss_pred Ccchheehh---h-hcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHH-cCCHHHHHHHHHHccChhhhHHHHHHcCCH
Confidence 444444444 2 3699999988864 44788999999997766 57999999999986 22234455
Q ss_pred HHHHHHHHHHHHcC
Q 009385 505 YYAANYANFLWNTG 518 (536)
Q Consensus 505 eal~NyA~~L~elG 518 (536)
+.+..++......|
T Consensus 724 ~~~~~~~~~a~~~~ 737 (814)
T 3mkq_A 724 EGLVTLAKDAETTG 737 (814)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC
Confidence 54444444443333
No 243
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=74.09 E-value=13 Score=36.46 Aligned_cols=50 Identities=8% Similarity=-0.013 Sum_probs=33.0
Q ss_pred CCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQ-----EPND---PLLLANYAQFLYIVAHDYDRAEEYFKRAIA 463 (536)
Q Consensus 414 gdyeeAee~YqKALeL-----dPdn---~eAL~NLA~lL~e~~GD~deAEe~FeKALe 463 (536)
|+.+.|...|+.|..+ .|.| ..+..|++.++|+..++.++|....++|+.
T Consensus 139 g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 139 CSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp SCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3466777777777653 3333 356667777777767777777777777765
No 244
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=71.59 E-value=8 Score=39.43 Aligned_cols=50 Identities=10% Similarity=0.038 Sum_probs=45.6
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009385 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIA 463 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALe 463 (536)
.|++.+|+..+.+++..+|-+-.++..+-.+|+ ..|+..+|++.|++.-+
T Consensus 184 ~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~-~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 184 CGRASAVIAELEALTFEHPYREPLWTQLITAYY-LSDRQSDALGAYRRVKT 233 (388)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 389999999999999999999999999888888 68999999999998754
No 245
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=70.59 E-value=35 Score=33.03 Aligned_cols=86 Identities=15% Similarity=0.140 Sum_probs=57.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-----------------hCCCCHHHHH-HH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIA-----------------VEPPDAESFS-KY 475 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALe-----------------LDPddaeAL~-nL 475 (536)
|+|.+++-++. +-+-..+.+--+ +++...+||.+|..+++..|+ +||.|-+-+. .+
T Consensus 47 gEY~R~Lf~L~-----~lNT~Ts~YYk~-LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~ 120 (242)
T 3kae_A 47 GEYTRALFHLH-----KLNTCTSKYYES-LCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLL 120 (242)
T ss_dssp TCHHHHHHHHH-----TCCBHHHHHHHH-HHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHH
T ss_pred chHhHHHHHHH-----hcchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHH
Confidence 56666554332 222333333333 344478999999999999992 3466766544 55
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHH
Q 009385 476 ASFLWRVRNDLWAAEETFLEAISADPTNSYY 506 (536)
Q Consensus 476 G~~L~e~~GD~eEAee~feKALeLDPdNpea 506 (536)
|.++- +.|+.+||+.+|.+....+|-.+.+
T Consensus 121 a~llt-q~g~r~EaI~y~~~Sf~~~~lf~~v 150 (242)
T 3kae_A 121 GDLCT-LSGYREEGIGHYVRSFGKSFLFSPV 150 (242)
T ss_dssp HHHHH-HTTCHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHHH-HhcCHHHhhhHhhhhcCCccccchH
Confidence 66554 5689999999999999998866543
No 246
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=69.32 E-value=25 Score=40.86 Aligned_cols=97 Identities=12% Similarity=-0.014 Sum_probs=66.7
Q ss_pred HHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH---hC-----------------C-C--CHHHHHHHHHHHHHh
Q 009385 426 GLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIA---VE-----------------P-P--DAESFSKYASFLWRV 482 (536)
Q Consensus 426 ALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALe---LD-----------------P-d--daeAL~nLG~~L~e~ 482 (536)
.+..-|.++..-+-+|+++. ..|++++|..+|++|-. .+ + . -+..|.... .+++.
T Consensus 834 l~~~~~~~~~~~yl~g~~~L-~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~-~LFe~ 911 (1139)
T 4fhn_B 834 LIGWLNSDPIAVYLKALIYL-KSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLS-KKLFE 911 (1139)
T ss_dssp HHHHSCCCHHHHHHHHHHHH-HTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHH-HHHHH
T ss_pred HhhhccCCcHHHHHHHHHHH-hcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHH-HHHHH
Confidence 44556778877788898877 69999999999988732 11 0 0 112233333 35555
Q ss_pred cCCHHHHHHHHHHHHHhCC-CCHH----HHHHHHHHHHHcCCCcccc
Q 009385 483 RNDLWAAEETFLEAISADP-TNSY----YAANYANFLWNTGGEDTCF 524 (536)
Q Consensus 483 ~GD~eEAee~feKALeLDP-dNpe----al~NyA~~L~elGr~E~cl 524 (536)
.+-++.++++.+.|++..+ ++.. .+.++=.....+|++|.++
T Consensus 912 ~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay 958 (1139)
T 4fhn_B 912 ESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAH 958 (1139)
T ss_dssp TSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGG
T ss_pred cCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHH
Confidence 6789999999999999764 4443 4566667778889988764
No 247
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=67.04 E-value=11 Score=36.88 Aligned_cols=25 Identities=32% Similarity=0.438 Sum_probs=11.4
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHH
Q 009385 438 ANYAQFLYIVAHDYDRAEEYFKRAI 462 (536)
Q Consensus 438 ~NLA~lL~e~~GD~deAEe~FeKAL 462 (536)
.|++.++|+..++.++|....++|+
T Consensus 176 LN~SVF~yEil~~~~~A~~lAk~af 200 (234)
T 2br9_A 176 LNFSVFYYEILNSPDRACRLAKAAF 200 (234)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3444444444444444444444443
No 248
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=66.87 E-value=20 Score=33.68 Aligned_cols=55 Identities=16% Similarity=0.144 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 009385 432 NDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLEA 496 (536)
Q Consensus 432 dn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feKA 496 (536)
.|+..-+.+|. ..|+++.|.+..+.. ++..-|..||..... .|+++-|+.+|+++
T Consensus 6 ~D~~~rF~LAL----~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~-~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 6 QDPHIRFDLAL----EYGNLDAALDEAKKL-----NDSITWERLIQEALA-QGNASLAEMIYQTQ 60 (177)
T ss_dssp SCHHHHHHHHH----HTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHH-TTCHHHHHHHHHHT
T ss_pred CChHHHHHHHH----hcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHH-cCChHHHHHHHHHh
Confidence 47778888772 479999999998776 788999999997766 57999999999875
No 249
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=65.71 E-value=12 Score=36.79 Aligned_cols=46 Identities=24% Similarity=0.350 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHH-----hCCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 009385 417 FRTELLYQTGLA-----QEPNDP---LLLANYAQFLYIVAHDYDRAEEYFKRAI 462 (536)
Q Consensus 417 eeAee~YqKALe-----LdPdn~---eAL~NLA~lL~e~~GD~deAEe~FeKAL 462 (536)
+.|.+.|++|+. +.|.|| .+..|++.++|+..++.++|....++|+
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345555655543 345554 3344555555555566666555555544
No 250
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=65.23 E-value=12 Score=37.21 Aligned_cols=47 Identities=23% Similarity=0.297 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHH----hCCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009385 417 FRTELLYQTGLA----QEPNDP---LLLANYAQFLYIVAHDYDRAEEYFKRAIA 463 (536)
Q Consensus 417 eeAee~YqKALe----LdPdn~---eAL~NLA~lL~e~~GD~deAEe~FeKALe 463 (536)
++|..+|++|+. +.|.|| .+..|++.+||+..++.++|....++|+.
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 356666666664 355555 34456666666656666666666666654
No 251
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=64.12 E-value=14 Score=36.71 Aligned_cols=19 Identities=21% Similarity=0.352 Sum_probs=8.8
Q ss_pred HHHHHHHHhcCCHHHHHHH
Q 009385 474 KYASFLWRVRNDLWAAEET 492 (536)
Q Consensus 474 nLG~~L~e~~GD~eEAee~ 492 (536)
|+++|+++..++.++|..+
T Consensus 178 NfSVFyYEIln~~~~Ac~l 196 (248)
T 3uzd_A 178 NYSVFYYEIQNAPEQACHL 196 (248)
T ss_dssp HHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHH
Confidence 4444555444444444443
No 252
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=63.89 E-value=14 Score=36.90 Aligned_cols=46 Identities=28% Similarity=0.363 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHH-----hCCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 009385 417 FRTELLYQTGLA-----QEPNDP---LLLANYAQFLYIVAHDYDRAEEYFKRAI 462 (536)
Q Consensus 417 eeAee~YqKALe-----LdPdn~---eAL~NLA~lL~e~~GD~deAEe~FeKAL 462 (536)
++|...|+.|+. +.|.|| .+..|++.|||+..++.++|....++|+
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 356666666663 356665 3455666666666677777766666665
No 253
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=61.80 E-value=18 Score=35.38 Aligned_cols=47 Identities=15% Similarity=0.132 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009385 452 DRAEEYFKRAIA-----VEPPDAE---SFSKYASFLWRVRNDLWAAEETFLEAIS 498 (536)
Q Consensus 452 deAEe~FeKALe-----LDPddae---AL~nLG~~L~e~~GD~eEAee~feKALe 498 (536)
++|...|++|++ +.|.||- ...|+++|+++..++.++|..+-++|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 568888888885 5788884 4568899999988999999887777665
No 254
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=61.22 E-value=21 Score=37.28 Aligned_cols=120 Identities=16% Similarity=0.090 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHhcccccccccc--HHHHHHhcCccccccCccccCCHHHHHHHHHHHHHh--CCCCH----HHHHHH
Q 009385 369 EEELNLWNSIVDEASQMQVTDESLD--HETMERFVSPVTANIEADDYADYFRTELLYQTGLAQ--EPNDP----LLLANY 440 (536)
Q Consensus 369 e~EvaLwnsmvaEA~~mQ~~d~~lD--~ea~krlvspV~AeLepDd~gdyeeAee~YqKALeL--dPdn~----eAL~NL 440 (536)
+..+.+-..+++.|.. ..... ...--++.... + +.|+|.+|...+.+.++. .-++. +++..-
T Consensus 76 ~~~~~~~~~~~~~a~~----~~r~flr~~l~~kL~~l~---~---~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle 145 (394)
T 3txn_A 76 GIEVQLCKDCIEWAKQ----EKRTFLRQSLEARLIALY---F---DTALYTEALALGAQLLRELKKLDDKNLLVEVQLLE 145 (394)
T ss_dssp HHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHH---H---HTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH---H---HhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHH
Confidence 4556677777777664 11111 11111222221 1 338999999999988884 22233 233334
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHhC---CCCHHH---HHHHHHHHHH-hcCCHHHHHHHHHHHHHh
Q 009385 441 AQFLYIVAHDYDRAEEYFKRAIAVE---PPDAES---FSKYASFLWR-VRNDLWAAEETFLEAISA 499 (536)
Q Consensus 441 A~lL~e~~GD~deAEe~FeKALeLD---PddaeA---L~nLG~~L~e-~~GD~eEAee~feKALeL 499 (536)
.+++. ..+++.++..+|.+|.... +.++.. +..++.+++. ..++|.+|-.+|-+|.+-
T Consensus 146 ~~~~~-~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 146 SKTYH-ALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHHHH-HhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 44555 6899999999999997764 344433 2333334444 457999999999999853
No 255
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=60.98 E-value=98 Score=32.11 Aligned_cols=84 Identities=6% Similarity=0.072 Sum_probs=50.1
Q ss_pred CCHHHHHHHHHHHHHhC--CCC----HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH---hCCCCHHH----HHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQE--PND----PLLLANYAQFLYIVAHDYDRAEEYFKRAIA---VEPPDAES----FSKYASFLW 480 (536)
Q Consensus 414 gdyeeAee~YqKALeLd--Pdn----~eAL~NLA~lL~e~~GD~deAEe~FeKALe---LDPddaeA----L~nLG~~L~ 480 (536)
|++.+|...++.....- ..+ .+.+.--.+++. ..+|+.+|..+++++.. -.+.++.. +..+|.++.
T Consensus 151 g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l-~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~ 229 (445)
T 4b4t_P 151 GKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSI-LKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISL 229 (445)
T ss_dssp TCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHH
Confidence 66666666666554321 111 234444455555 57899999999888732 34445432 233344444
Q ss_pred HhcCCHHHHHHHHHHHHHh
Q 009385 481 RVRNDLWAAEETFLEAISA 499 (536)
Q Consensus 481 e~~GD~eEAee~feKALeL 499 (536)
..++|.+|-.+|..+...
T Consensus 230 -~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 230 -HKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp -HHCCHHHHHHHHHHHHHH
T ss_pred -HhhhHHHHHHHHHHHHhc
Confidence 456899998888888764
No 256
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=60.31 E-value=76 Score=37.71 Aligned_cols=90 Identities=8% Similarity=-0.069 Sum_probs=67.2
Q ss_pred CCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhcCCHH
Q 009385 414 ADYFRTELLYQTGLA-----QEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVE-PPDAESFSKYASFLWRVRNDLW 487 (536)
Q Consensus 414 gdyeeAee~YqKALe-----LdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLD-PddaeAL~nLG~~L~e~~GD~e 487 (536)
|+.++|..+|.+.-+ ..| |...|+-+-.-++ ..|+.++|.+.|++..+.. ..|...|+.+=..+.+.++..+
T Consensus 141 G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glc-k~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~glcK~G~~~e 218 (1134)
T 3spa_A 141 DQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWA-RQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGRQDQDAG 218 (1134)
T ss_dssp TCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCCHH
T ss_pred CCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHH-hCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHhCCCcHH
Confidence 899999999976443 356 5777777766677 5899999999999988754 3366677777666776543468
Q ss_pred HHHHHHHHHHHh--CCCCHH
Q 009385 488 AAEETFLEAISA--DPTNSY 505 (536)
Q Consensus 488 EAee~feKALeL--DPdNpe 505 (536)
+|.++|++..+. .||...
T Consensus 219 ~A~~Ll~EM~~kG~~PD~vt 238 (1134)
T 3spa_A 219 TIERCLEQMSQEGLKLQALF 238 (1134)
T ss_dssp HHHHHHHHHHHHTCCSHHHH
T ss_pred HHHHHHHHHHHcCCCCChhh
Confidence 999999998885 465443
No 257
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=60.22 E-value=17 Score=36.25 Aligned_cols=33 Identities=15% Similarity=0.119 Sum_probs=15.6
Q ss_pred hCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHH
Q 009385 464 VEPPDAE---SFSKYASFLWRVRNDLWAAEETFLEA 496 (536)
Q Consensus 464 LDPddae---AL~nLG~~L~e~~GD~eEAee~feKA 496 (536)
+.|.||- ...|+++|+++..++.++|..+.++|
T Consensus 190 L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~A 225 (261)
T 3ubw_A 190 LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAA 225 (261)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4455542 22345555555555555554443333
No 258
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=60.17 E-value=20 Score=35.77 Aligned_cols=47 Identities=23% Similarity=0.297 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHH----hCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009385 452 DRAEEYFKRAIA----VEPPDAE---SFSKYASFLWRVRNDLWAAEETFLEAIS 498 (536)
Q Consensus 452 deAEe~FeKALe----LDPddae---AL~nLG~~L~e~~GD~eEAee~feKALe 498 (536)
++|...|++|++ +.|.||- ...|+++|+++..++.++|..+.++|+.
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 578889999986 5788874 4568899999998999999888887775
No 259
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=60.08 E-value=18 Score=36.63 Aligned_cols=108 Identities=15% Similarity=0.095 Sum_probs=68.7
Q ss_pred cccccHHHHHHhcCccccccCc---cccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHH---
Q 009385 389 DESLDHETMERFVSPVTANIEA---DDYADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAI--- 462 (536)
Q Consensus 389 d~~lD~ea~krlvspV~AeLep---Dd~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKAL--- 462 (536)
....+.+.+.|+...+. .+.+ +...-..+|+.|-.+.=...-.|+++|..+|..++ ..+++.+|+.+|-..-
T Consensus 87 ~~~~~~~~~~rl~~l~~-~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~-~e~~~~~A~~H~i~~~~~s 164 (312)
T 2wpv_A 87 EVKVDDISVARLVRLIA-ELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLL-EGDFVYEAERYFMLGTHDS 164 (312)
T ss_dssp TCCCSHHHHHHHHHHHT-TCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHH-HTTCHHHHHHHHHTSCHHH
T ss_pred CCCCCHHHHHHHHHHHH-HCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHh-hcCCHHHHHHHHHhCCCcc
Confidence 44667888888887653 2222 22223344555544432324469999999999988 5899999999885321
Q ss_pred -------------H---hCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009385 463 -------------A---VEPPDAESFSKYASFLWRVRNDLWAAEETFLEAIS 498 (536)
Q Consensus 463 -------------e---LDPddaeAL~nLG~~L~e~~GD~eEAee~feKALe 498 (536)
+ -.|...+.+..-+++.+...++..-|...|+.-.+
T Consensus 165 ~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~~~f~~ 216 (312)
T 2wpv_A 165 MIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHESKDIFLE 216 (312)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 1 23444566666666555555788888888776553
No 260
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=60.00 E-value=20 Score=35.23 Aligned_cols=48 Identities=15% Similarity=0.212 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009385 451 YDRAEEYFKRAIA-----VEPPDAE---SFSKYASFLWRVRNDLWAAEETFLEAIS 498 (536)
Q Consensus 451 ~deAEe~FeKALe-----LDPddae---AL~nLG~~L~e~~GD~eEAee~feKALe 498 (536)
.+.|...|++|++ +.|.||- ...|+++|+++..++.++|....++|+.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3678888888875 6788985 3467899999999999998887666643
No 261
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=59.28 E-value=90 Score=30.26 Aligned_cols=102 Identities=17% Similarity=0.154 Sum_probs=65.3
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHH
Q 009385 412 DYADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEE 491 (536)
Q Consensus 412 d~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee 491 (536)
.|.+|+-+.=+-.=. -|.+++.-.-++..++ ..|+|.+|.-.+. .-+-..+.+.-+.++.. .+|+..|+.
T Consensus 14 kY~dYdt~~fLsa~L---~~~~~eY~lL~~I~Ly-yngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~k-lKdYkkA~~ 83 (242)
T 3kae_A 14 RYRDYETAIFLAACL---LPCKPEYRMLMSIVLY-LNGEYTRALFHLH-----KLNTCTSKYYESLCYKK-KKDYKKAIK 83 (242)
T ss_dssp HTTCHHHHHHHHHHH---C----CTHHHHHHHHH-HTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred hcccccHHHHHHHHH---ccCChHHHhhhhhhhh-hcchHhHHHHHHH-----hcchHHHHHHHHHHHHH-HHHHHHHHH
Confidence 346777665333333 3334444444677777 5899999887653 34556666666656655 469999999
Q ss_pred HHHHHH--Hh---------------CCCCHHHH-HHHHHHHHHcCCCccc
Q 009385 492 TFLEAI--SA---------------DPTNSYYA-ANYANFLWNTGGEDTC 523 (536)
Q Consensus 492 ~feKAL--eL---------------DPdNpeal-~NyA~~L~elGr~E~c 523 (536)
++++.+ +. ||.+-+.. .-+|.++...|..+++
T Consensus 84 ~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~Ea 133 (242)
T 3kae_A 84 SLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEG 133 (242)
T ss_dssp HHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHh
Confidence 999999 22 35566654 4588889999876543
No 262
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=59.27 E-value=42 Score=34.61 Aligned_cols=85 Identities=12% Similarity=0.063 Sum_probs=60.6
Q ss_pred CCHHHHHHHHHHHHHhCCC--C-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--CCCHHHHH----HHHHHHHHhcC
Q 009385 414 ADYFRTELLYQTGLAQEPN--D-PLLLANYAQFLYIVAHDYDRAEEYFKRAIAVE--PPDAESFS----KYASFLWRVRN 484 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPd--n-~eAL~NLA~lL~e~~GD~deAEe~FeKALeLD--PddaeAL~----nLG~~L~e~~G 484 (536)
|++.+|.++|.++...-.. + .+.+.+.-++.. ..+|+..+..++.+|-.+- ..|+.... ..|.+++. .+
T Consensus 145 Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l-~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~-~r 222 (429)
T 4b4t_R 145 GDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGF-FYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLA-VR 222 (429)
T ss_dssp CCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGG-TS
T ss_pred CCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHH-hC
Confidence 8999999999998886433 2 356666666655 5899999999999997652 33444332 23433443 46
Q ss_pred CHHHHHHHHHHHHHhC
Q 009385 485 DLWAAEETFLEAISAD 500 (536)
Q Consensus 485 D~eEAee~feKALeLD 500 (536)
+|.+|-.+|..++.-.
T Consensus 223 ~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 223 NFKEAAKLLVDSLATF 238 (429)
T ss_dssp CHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHhccC
Confidence 9999999999988753
No 263
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=58.30 E-value=22 Score=35.38 Aligned_cols=47 Identities=15% Similarity=0.156 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009385 452 DRAEEYFKRAIA-----VEPPDAE---SFSKYASFLWRVRNDLWAAEETFLEAIS 498 (536)
Q Consensus 452 deAEe~FeKALe-----LDPddae---AL~nLG~~L~e~~GD~eEAee~feKALe 498 (536)
+.|...|++|+. +.|.||- ...|+++|+++..++.++|..+.++|+.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 568888998885 5788884 4568899999998999998887776663
No 264
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=58.26 E-value=23 Score=35.14 Aligned_cols=48 Identities=25% Similarity=0.341 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHH-----hCCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009385 416 YFRTELLYQTGLA-----QEPNDP---LLLANYAQFLYIVAHDYDRAEEYFKRAIA 463 (536)
Q Consensus 416 yeeAee~YqKALe-----LdPdn~---eAL~NLA~lL~e~~GD~deAEe~FeKALe 463 (536)
.+.|...|++|+. +.|.|| .+..|++.|+|+..++.++|....++|+.
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4678899998875 568887 45678888999888999999999999875
No 265
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=57.49 E-value=46 Score=31.17 Aligned_cols=80 Identities=18% Similarity=0.088 Sum_probs=60.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETF 493 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~f 493 (536)
++..+-+.+|.+. +-++- +.++|.-+.-.+|..|+-++.+...+.-+|-+++.+..+|..|... |+..+|.++.
T Consensus 75 ~NlKrVi~C~~~~---n~~se--~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Kl-g~~r~a~eLl 148 (172)
T 1wy6_A 75 QNLKSVVECGVIN---NTLNE--HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRV-GDERDATTLL 148 (172)
T ss_dssp SCTHHHHHHHHHT---TCCCH--HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred hcHHHHHHHHHHh---cchHH--HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHh-cchhhHHHHH
Confidence 7888888888664 22222 3345543333589999999999998888888899999999988775 6999999999
Q ss_pred HHHHHh
Q 009385 494 LEAISA 499 (536)
Q Consensus 494 eKALeL 499 (536)
.+|.+-
T Consensus 149 ~~AC~k 154 (172)
T 1wy6_A 149 IEACKK 154 (172)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 999874
No 266
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=55.38 E-value=15 Score=36.92 Aligned_cols=49 Identities=18% Similarity=0.177 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 009385 451 YDRAEEYFKRAIAVEPPDAE---SFSKYASFLWRVRNDLWAAEETFLEAISA 499 (536)
Q Consensus 451 ~deAEe~FeKALeLDPddae---AL~nLG~~L~e~~GD~eEAee~feKALeL 499 (536)
|++|....++-|+..|.||- ...|+++|+++..++.++|..+.++|+.-
T Consensus 175 Yq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 175 YEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 44555555443333666663 33466677777667777777776666554
No 267
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=54.37 E-value=28 Score=34.75 Aligned_cols=48 Identities=25% Similarity=0.324 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHH-----hCCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009385 416 YFRTELLYQTGLA-----QEPNDP---LLLANYAQFLYIVAHDYDRAEEYFKRAIA 463 (536)
Q Consensus 416 yeeAee~YqKALe-----LdPdn~---eAL~NLA~lL~e~~GD~deAEe~FeKALe 463 (536)
.+.|.+.|++|+. +.|.|| .+..|++.++|+..++.++|....++|+.
T Consensus 172 ~e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3567888888875 467776 45667888888778999999988888875
No 268
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=51.58 E-value=22 Score=29.33 Aligned_cols=15 Identities=27% Similarity=0.386 Sum_probs=6.9
Q ss_pred hCCHHHHHHHHHHHH
Q 009385 448 AHDYDRAEEYFKRAI 462 (536)
Q Consensus 448 ~GD~deAEe~FeKAL 462 (536)
.|++++|..+|.+|+
T Consensus 32 ~g~y~eAl~lY~~ai 46 (83)
T 2w2u_A 32 EGNAEEAITNYKKAI 46 (83)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHH
Confidence 444444444444444
No 269
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=51.25 E-value=44 Score=32.69 Aligned_cols=52 Identities=6% Similarity=-0.022 Sum_probs=43.4
Q ss_pred hCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 009385 448 AHDYDRAEEYFKRAIAV-----EPPDA---ESFSKYASFLWRVRNDLWAAEETFLEAISA 499 (536)
Q Consensus 448 ~GD~deAEe~FeKALeL-----DPdda---eAL~nLG~~L~e~~GD~eEAee~feKALeL 499 (536)
.|+.+.|...|+.|+++ .|.|| ....|+++|+++..++.++|..+.++|+.+
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 46678999999999874 45555 567789999999999999999999999764
No 270
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=50.73 E-value=23 Score=29.01 Aligned_cols=11 Identities=27% Similarity=0.262 Sum_probs=5.6
Q ss_pred HHHHHHHHHHH
Q 009385 453 RAEEYFKRAIA 463 (536)
Q Consensus 453 eAEe~FeKALe 463 (536)
+|..+.++|++
T Consensus 10 ~Ai~lv~~Ave 20 (83)
T 2v6y_A 10 MARKYAILAVK 20 (83)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45555555544
No 271
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=48.48 E-value=42 Score=36.86 Aligned_cols=80 Identities=11% Similarity=0.034 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 009385 416 YFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAEETFLE 495 (536)
Q Consensus 416 yeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAee~feK 495 (536)
..++..++.++....+++ ...--++.... ..||++.|..+|++.-.-....+.+.+.+|..+.. .|+.++|..+|++
T Consensus 268 ~~~~~~~~~~~~~~~~~~-~~~e~~~r~Al-r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~-~g~~~~a~~~~~~ 344 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRSQST-SLIERRVRMAL-GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLE-RGREAEAKEILHQ 344 (618)
T ss_dssp CHHHHHHHHHHHHTCCCH-HHHHHHHHHHH-HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred ChHHHHHHHhccccCCCh-HHHHHHHHHHH-HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 567788888877655444 33444444444 46999999999987765445678889999997765 5799999999999
Q ss_pred HHH
Q 009385 496 AIS 498 (536)
Q Consensus 496 ALe 498 (536)
+..
T Consensus 345 ~a~ 347 (618)
T 1qsa_A 345 LMQ 347 (618)
T ss_dssp HHT
T ss_pred Hhc
Confidence 975
No 272
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=48.37 E-value=25 Score=35.33 Aligned_cols=48 Identities=25% Similarity=0.384 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHH-----h--CCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009385 416 YFRTELLYQTGLA-----Q--EPNDP---LLLANYAQFLYIVAHDYDRAEEYFKRAIA 463 (536)
Q Consensus 416 yeeAee~YqKALe-----L--dPdn~---eAL~NLA~lL~e~~GD~deAEe~FeKALe 463 (536)
.+.|.+.|++|++ + .|.|| .+..|++.++|+..++.++|....++|+.
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFd 225 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQ 225 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3567778877764 3 56666 34566777777777888888887777764
No 273
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=47.18 E-value=14 Score=40.22 Aligned_cols=72 Identities=21% Similarity=0.231 Sum_probs=49.3
Q ss_pred CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 009385 430 EPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD-------AESFSKYASFLWRVRNDLWAAEETFLEAISADPT 502 (536)
Q Consensus 430 dPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd-------aeAL~nLG~~L~e~~GD~eEAee~feKALeLDPd 502 (536)
|+.--..+.|+=.=.|...+.++.|+++..++. -|.+ +..++.+|.++.. .++|.+|.+++..|++..|.
T Consensus 226 D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~-q~~Y~eA~~~L~~A~rkap~ 302 (523)
T 4b4t_S 226 DNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAI-QLDYSTANEYIIAAIRKAPH 302 (523)
T ss_dssp SSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHTSSCSC
T ss_pred CcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCc
Confidence 443334444433333435788999999999995 4433 3445667887775 46999999999999998876
Q ss_pred CH
Q 009385 503 NS 504 (536)
Q Consensus 503 Np 504 (536)
+.
T Consensus 303 ~~ 304 (523)
T 4b4t_S 303 NS 304 (523)
T ss_dssp SS
T ss_pred ch
Confidence 53
No 274
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=43.61 E-value=48 Score=34.15 Aligned_cols=105 Identities=11% Similarity=-0.001 Sum_probs=65.4
Q ss_pred CHHHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC--C-HHHHHHHHHHHHHhcCCHHH
Q 009385 415 DYFRTELLYQTGLAQE---PNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPP--D-AESFSKYASFLWRVRNDLWA 488 (536)
Q Consensus 415 dyeeAee~YqKALeLd---Pdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPd--d-aeAL~nLG~~L~e~~GD~eE 488 (536)
..++-......+.+.+ ..-..++..+|.+++ ..||+++|.++|.++...-.. + .+.+...-.+... .+|+..
T Consensus 109 ~l~~l~~~~~~~~~~~~~e~e~~~~~~~la~~~~-~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~-~~d~~~ 186 (429)
T 4b4t_R 109 KIKELNEKIQKLEEDDEGELEQAQAWINLGEYYA-QIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFF-YNDQLY 186 (429)
T ss_dssp CHHHHHHHHHHHHHCCSCCCCCSSCCHHHHHHHH-HHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHH-HTCHHH
T ss_pred HHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-hccHHH
Confidence 4443333444444422 223457888999988 689999999999999876433 3 3444444444444 369999
Q ss_pred HHHHHHHHHHhC--CCCHHH----HHHHHHHHHHcCCCc
Q 009385 489 AEETFLEAISAD--PTNSYY----AANYANFLWNTGGED 521 (536)
Q Consensus 489 Aee~feKALeLD--PdNpea----l~NyA~~L~elGr~E 521 (536)
|..++.+|..+- ..++.. ....|.+++..+++.
T Consensus 187 ~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r~f~ 225 (429)
T 4b4t_R 187 VKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVRNFK 225 (429)
T ss_dssp HHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTSCHH
T ss_pred HHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhChHH
Confidence 999999997752 233332 233444555555543
No 275
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=42.64 E-value=1.2e+02 Score=31.21 Aligned_cols=108 Identities=11% Similarity=0.038 Sum_probs=69.0
Q ss_pred cccccHHHHHHhcCccccccCc---cccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHH-----
Q 009385 389 DESLDHETMERFVSPVTANIEA---DDYADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKR----- 460 (536)
Q Consensus 389 d~~lD~ea~krlvspV~AeLep---Dd~gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeK----- 460 (536)
....|.+...|+...+. .+.+ +...-..+|+.|-.+.=...-.|++++..+|..++ ..+++.+|+.+|-.
T Consensus 89 ~~~~~~~~~~rL~~L~~-~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~-~e~~~~~Ae~H~ilg~~~s 166 (336)
T 3lpz_A 89 GQRVDGASRGKLLGCLR-LFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYV-EEGEFEAAEKHLVLGTKES 166 (336)
T ss_dssp TCCCCHHHHHHHHHHHT-TSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHH-HTTCHHHHHHHHTTSCTTH
T ss_pred CCCCCHHHHHHHHHHHH-hCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHH-ccCCHHHHHHHHHhcCCch
Confidence 34567788888887663 2322 22233345555555422234578999999999988 58999999998731
Q ss_pred --HH---------HhCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009385 461 --AI---------AVEPPDAESFSKYASFLWRVRNDLWAAEETFLEAIS 498 (536)
Q Consensus 461 --AL---------eLDPddaeAL~nLG~~L~e~~GD~eEAee~feKALe 498 (536)
.+ +.+|..++.+..-|++.+...++...|.+.|+.-++
T Consensus 167 ~~~~a~mL~ew~~~~~~~e~dlfiaRaVL~yL~l~n~~~A~~~~~~f~~ 215 (336)
T 3lpz_A 167 PEVLARMEYEWYKQDESHTAPLYCARAVLPYLLVANVRAANTAYRIFTS 215 (336)
T ss_dssp HHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 11 123555666666677666666788888886655443
No 276
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=40.78 E-value=1e+02 Score=28.50 Aligned_cols=57 Identities=11% Similarity=0.074 Sum_probs=41.9
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHH-HHHHHHHh-cCCHHHHHHHHHHHHH
Q 009385 441 AQFLYIVAHDYDRAEEYFKRAIAVEPPD------AESFSK-YASFLWRV-RNDLWAAEETFLEAIS 498 (536)
Q Consensus 441 A~lL~e~~GD~deAEe~FeKALeLDPdd------aeAL~n-LG~~L~e~-~GD~eEAee~feKALe 498 (536)
|..++ ..|+|=+|-+.++.+-...+.. -.++.. ++..+++. +|+...|...+.+|+.
T Consensus 39 ~i~lF-n~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 39 GVRLY-NSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHH-HTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHH-hCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 44456 4689999999999988877665 345555 55544443 4799999999999988
No 277
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=39.73 E-value=65 Score=30.99 Aligned_cols=84 Identities=10% Similarity=0.097 Sum_probs=52.3
Q ss_pred CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH-H
Q 009385 430 EPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVE--PPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSY-Y 506 (536)
Q Consensus 430 dPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLD--PddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpe-a 506 (536)
||....+|..|+..+. .++..++...|....... -..+.-|..+|.++- ..|++.+|.+.|+++++..-.-.+ .
T Consensus 76 D~RYLklWl~Ya~~~~--~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE-~~g~~~~A~~Vy~~GI~~~A~P~~rL 152 (202)
T 3esl_A 76 DPRFLKIWIWYINLFL--SNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLE-NAQFFLEAKVLLELGAENNCRPYNRL 152 (202)
T ss_dssp CHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCBSHHHH
T ss_pred CHHHHHHHHHHHHhhc--ccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCccHHHH
Confidence 4555566777765431 344667777777666654 555666777776554 457888888888888886543332 2
Q ss_pred HHHHHHHHHH
Q 009385 507 AANYANFLWN 516 (536)
Q Consensus 507 l~NyA~~L~e 516 (536)
...+..+..+
T Consensus 153 ~~~~~~F~~R 162 (202)
T 3esl_A 153 LRSLSNYEDR 162 (202)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3345555544
No 278
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=39.49 E-value=43 Score=27.98 Aligned_cols=17 Identities=18% Similarity=0.358 Sum_probs=11.3
Q ss_pred HhCCHHHHHHHHHHHHH
Q 009385 447 VAHDYDRAEEYFKRAIA 463 (536)
Q Consensus 447 ~~GD~deAEe~FeKALe 463 (536)
..|+|++|..+|..|++
T Consensus 27 ~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 27 AESRYQQALVCYQEGID 43 (93)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHH
Confidence 46777777776666664
No 279
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=38.62 E-value=40 Score=27.88 Aligned_cols=17 Identities=18% Similarity=0.305 Sum_probs=12.0
Q ss_pred HhCCHHHHHHHHHHHHH
Q 009385 447 VAHDYDRAEEYFKRAIA 463 (536)
Q Consensus 447 ~~GD~deAEe~FeKALe 463 (536)
..|++++|..+|..|++
T Consensus 28 ~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 28 SESRYPQALVCYQEGID 44 (86)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHH
Confidence 46777777777777664
No 280
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=36.69 E-value=46 Score=29.08 Aligned_cols=17 Identities=24% Similarity=0.514 Sum_probs=11.9
Q ss_pred HhCCHHHHHHHHHHHHH
Q 009385 447 VAHDYDRAEEYFKRAIA 463 (536)
Q Consensus 447 ~~GD~deAEe~FeKALe 463 (536)
..++|++|+.+|..|++
T Consensus 30 ~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 30 KAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHTCHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHH
Confidence 46777777777777765
No 281
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=36.62 E-value=52 Score=26.63 Aligned_cols=17 Identities=18% Similarity=0.346 Sum_probs=12.7
Q ss_pred HhCCHHHHHHHHHHHHH
Q 009385 447 VAHDYDRAEEYFKRAIA 463 (536)
Q Consensus 447 ~~GD~deAEe~FeKALe 463 (536)
..|++++|..+|..|++
T Consensus 25 ~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 25 TATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHH
Confidence 56788888877777775
No 282
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=31.73 E-value=1.1e+02 Score=31.69 Aligned_cols=82 Identities=10% Similarity=-0.040 Sum_probs=53.7
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHh--CCCCH----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC---CCCHHH---
Q 009385 439 NYAQFLYIVAHDYDRAEEYFKRAIAV--EPPDA----ESFSKYASFLWRVRNDLWAAEETFLEAISAD---PTNSYY--- 506 (536)
Q Consensus 439 NLA~lL~e~~GD~deAEe~FeKALeL--DPdda----eAL~nLG~~L~e~~GD~eEAee~feKALeLD---PdNpea--- 506 (536)
.+|.+++ ..|+|.+|.+.+.+.++- .-++. +++..-..++... +++.++.++|.+|.... +-+|..
T Consensus 104 kL~~l~~-~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~-~n~~k~k~~l~~a~~~~~ai~~~p~i~a~ 181 (394)
T 3txn_A 104 RLIALYF-DTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHAL-SNLPKARAALTSARTTANAIYCPPKVQGA 181 (394)
T ss_dssp HHHHHHH-HTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHH-HhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHhhhccCCCCHHHHHH
Confidence 6888888 699999999999998873 22232 3333334455554 69999999999998764 233432
Q ss_pred -HHHHHHHHH-HcCCCcc
Q 009385 507 -AANYANFLW-NTGGEDT 522 (536)
Q Consensus 507 -l~NyA~~L~-elGr~E~ 522 (536)
...-|.++. ..+++.+
T Consensus 182 i~~~~Gi~~l~~~rdyk~ 199 (394)
T 3txn_A 182 LDLQSGILHAADERDFKT 199 (394)
T ss_dssp HHHHHHHHHHHTTSCHHH
T ss_pred HHHHhhHHHHHhccCHHH
Confidence 334455555 5565543
No 283
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=31.33 E-value=85 Score=33.35 Aligned_cols=43 Identities=14% Similarity=0.184 Sum_probs=22.1
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 009385 419 TELLYQTGLAQ-----EPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAI 462 (536)
Q Consensus 419 Aee~YqKALeL-----dPdn~eAL~NLA~lL~e~~GD~deAEe~FeKAL 462 (536)
++.+|.+||.. +-.+..-|.-+|..+| ..+++.+|.+++-.|-
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~y-R~~~~reAl~~WA~Aa 323 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYY-RKKKYYEAIASWVDAG 323 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhh-hcchHHHHHHHHHHHH
Confidence 55566666554 2333444444555555 3566666665555443
No 284
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=30.17 E-value=80 Score=25.74 Aligned_cols=14 Identities=0% Similarity=-0.323 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHh
Q 009385 416 YFRTELLYQTGLAQ 429 (536)
Q Consensus 416 yeeAee~YqKALeL 429 (536)
..+|+.+.++|++.
T Consensus 8 ~~~Ai~lv~~Ave~ 21 (83)
T 2v6y_A 8 EDMARKYAILAVKA 21 (83)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34666666666554
No 285
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=29.46 E-value=83 Score=25.81 Aligned_cols=16 Identities=13% Similarity=0.181 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHhCCCC
Q 009385 453 RAEEYFKRAIAVEPPD 468 (536)
Q Consensus 453 eAEe~FeKALeLDPdd 468 (536)
+|+++|.+++...|+.
T Consensus 44 ~aie~l~~alk~e~d~ 59 (83)
T 2w2u_A 44 KAIEVLAQLVSLYRDG 59 (83)
T ss_dssp HHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHHCCCH
Confidence 5666666666655443
No 286
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=28.96 E-value=2.9e+02 Score=23.98 Aligned_cols=49 Identities=18% Similarity=0.298 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 009385 416 YFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFS 473 (536)
Q Consensus 416 yeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~ 473 (536)
..+|+.+..+|++.|- --+|..++.. |..|+++|.++++..|.+.....
T Consensus 15 l~kAi~lv~~Ave~D~-----ag~y~eAl~l----Y~~Aie~l~~alk~e~~~~~~k~ 63 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDK-----AGNYEEALQL----YQHAVQYFLHVVKYEAQGDKAKQ 63 (117)
T ss_dssp HHHHHHHHHHHHHHHH-----HTCHHHHHHH----HHHHHHHHHHHHHTSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHH-----ccCHHHHHHH----HHHHHHHHHHHHHhccCCHHHHH
Confidence 6678888888876532 1222322221 55888888888888877765433
No 287
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=28.61 E-value=3.5e+02 Score=30.93 Aligned_cols=81 Identities=14% Similarity=-0.015 Sum_probs=55.2
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-hC--------------------CCCHH-HHHHHHHHHHH
Q 009385 424 QTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIA-VE--------------------PPDAE-SFSKYASFLWR 481 (536)
Q Consensus 424 qKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALe-LD--------------------Pddae-AL~nLG~~L~e 481 (536)
+..+.--|.++..-+-+|+++. ..|++++|..+|+||-. +. ++... .|+..-.-+++
T Consensus 830 ~eL~~~~~~t~~~~yv~gr~~L-~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE 908 (950)
T 4gq2_M 830 MQLIGWLNSDPIAVYLKALIYL-KSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLF 908 (950)
T ss_dssp HHHGGGCCSSHHHHHHHHHHHH-HTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHH
Confidence 3455667888877788998877 69999999999998752 11 11111 12222233455
Q ss_pred hcCCHHHHHHHHHHHHH-hCCCCHH
Q 009385 482 VRNDLWAAEETFLEAIS-ADPTNSY 505 (536)
Q Consensus 482 ~~GD~eEAee~feKALe-LDPdNpe 505 (536)
..+-++-++...+.||+ ++++++.
T Consensus 909 ~~~a~~~vi~fA~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 909 EESAYIDALEFSLLADASKETDDED 933 (950)
T ss_dssp HTTCHHHHHHHHHHHHHTCCSCCHH
T ss_pred hcCCHHHHHHHHHHHHhhcccCCcc
Confidence 66789999999999997 4566665
No 288
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=26.14 E-value=40 Score=36.71 Aligned_cols=53 Identities=17% Similarity=0.192 Sum_probs=41.3
Q ss_pred CCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH
Q 009385 414 ADYFRTELLYQTGLAQEPND-------PLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDA 469 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn-------~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdda 469 (536)
+.|++|+.+..++. .|.+ ...++.+|.++. .+++|.+|.++|..|++.-|.+.
T Consensus 245 ~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a-~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 245 GEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINA-IQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp SCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHTSSCSCSS
T ss_pred CcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCcch
Confidence 68889999999885 4432 234455687776 68999999999999999888764
No 289
>1cn3_F Fragment of coat protein VP2; viral coat protein VP1, viral coat protein VP2, viral entry, viral protein; 2.20A {Polyomavirus}
Probab=25.54 E-value=24 Score=23.83 Aligned_cols=9 Identities=67% Similarity=1.479 Sum_probs=4.1
Q ss_pred cCCCCCCCC
Q 009385 311 GGNNGGGGK 319 (536)
Q Consensus 311 g~~~gggg~ 319 (536)
|||+||||.
T Consensus 1 gggggggga 9 (29)
T 1cn3_F 1 GGGGGGGGA 9 (29)
T ss_dssp CCCCCCSTT
T ss_pred CCCCCCCcc
Confidence 344445543
No 290
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=25.27 E-value=1.5e+02 Score=31.98 Aligned_cols=45 Identities=13% Similarity=0.156 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009385 418 RTELLYQTGLAQ-----EPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIA 463 (536)
Q Consensus 418 eAee~YqKALeL-----dPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALe 463 (536)
.++.+|++||.. +-.+..-|.-+|-.++ ..++|.+|..++-.|-.
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~-R~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHC-RNRNVREALQAWADTAT 331 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccCcccceeecchHHH-HhhhHHHHHHHhhhhhh
Confidence 456677777764 3334444544566666 46777777777776654
No 291
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=24.78 E-value=1.9e+02 Score=29.14 Aligned_cols=109 Identities=10% Similarity=0.021 Sum_probs=62.7
Q ss_pred CCHHHHHHHHHHHHHhC----C--CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHh
Q 009385 414 ADYFRTELLYQTGLAQE----P--NDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAV-----EPPDAESFSKYASFLWRV 482 (536)
Q Consensus 414 gdyeeAee~YqKALeLd----P--dn~eAL~NLA~lL~e~~GD~deAEe~FeKALeL-----DPddaeAL~nLG~~L~e~ 482 (536)
|+|=+|.+.|+...... - +-.++++.-+..+. ..|++.-|-....-.|+. .|-+.+....+..++...
T Consensus 27 G~yYEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll-~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~ 105 (312)
T 2wpv_A 27 GDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFL-KAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAEL 105 (312)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTC
T ss_pred cChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH-HCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHC
Confidence 78888888877665542 1 12245555555555 467776666653333332 355566677777655331
Q ss_pred cCCHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHcCCCccc
Q 009385 483 RNDLWAAEETFLEAISA-------DPTNSYYAANYANFLWNTGGEDTC 523 (536)
Q Consensus 483 ~GD~eEAee~feKALeL-------DPdNpeal~NyA~~L~elGr~E~c 523 (536)
-..-.+=.++.++|++- .-.+|+.+..+|..||+.|+..++
T Consensus 106 p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A 153 (312)
T 2wpv_A 106 DPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEA 153 (312)
T ss_dssp CTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHH
Confidence 11111123445555542 225889999999999998876443
No 292
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=24.69 E-value=5.3e+02 Score=30.76 Aligned_cols=81 Identities=7% Similarity=-0.036 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--CCCCHHHHHHH
Q 009385 437 LANYAQFLYIVAHDYDRAEEYFKRAIAV----EPPDAESFSKYASFLWRVRNDLWAAEETFLEAISA--DPTNSYYAANY 510 (536)
Q Consensus 437 L~NLA~lL~e~~GD~deAEe~FeKALeL----DPddaeAL~nLG~~L~e~~GD~eEAee~feKALeL--DPdNpeal~Ny 510 (536)
|+.+-..|+ ..|+.++|.+.|++.-+. -.-|...|+.+-..+... |++++|.++|++-.+. .||. ..+..+
T Consensus 130 ynaLIdglc-K~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~-G~~~eA~~Lf~eM~~~G~~PDv-vTYntL 206 (1134)
T 3spa_A 130 LLAFFKCCL-LTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQ-GAFKELVYVLFMVKDAGLTPDL-LSYAAA 206 (1134)
T ss_dssp HHHHHHHHH-HHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHTTCCCCH-HHHHHH
T ss_pred HHHHHHHHH-hCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhC-CCHHHHHHHHHHHHHcCCCCcH-HHHHHH
Confidence 444444566 589999999999765432 244677888887777764 6999999999999884 5754 445556
Q ss_pred HHHHHHcCCC
Q 009385 511 ANFLWNTGGE 520 (536)
Q Consensus 511 A~~L~elGr~ 520 (536)
-..|.+.|+.
T Consensus 207 I~glcK~G~~ 216 (1134)
T 3spa_A 207 LQCMGRQDQD 216 (1134)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHhCCCc
Confidence 6667777764
No 293
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=24.09 E-value=1.7e+02 Score=24.38 Aligned_cols=56 Identities=13% Similarity=0.006 Sum_probs=39.5
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 009385 440 YAQFLYIVAHDYDRAEEYFKRAIAVEPPDA----ESFSKYASFLWR-VRNDLWAAEETFLEAIS 498 (536)
Q Consensus 440 LA~lL~e~~GD~deAEe~FeKALeLDPdda----eAL~nLG~~L~e-~~GD~eEAee~feKALe 498 (536)
.|..++ ..|+|=+|-+.++.+-...|+.. ..+..++..+++ .+|+. |...+.+|+.
T Consensus 7 ~~~~lf-n~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 7 EVLGLW-RAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHH-HTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHH-hCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 344556 46999999999998888886531 355566665555 34666 8889999887
No 294
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=24.08 E-value=1.6e+02 Score=23.98 Aligned_cols=33 Identities=21% Similarity=0.289 Sum_probs=19.3
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 009385 440 YAQFLYIVAHDYDRAEEYFKRAIAVEPPDAESFS 473 (536)
Q Consensus 440 LA~lL~e~~GD~deAEe~FeKALeLDPddaeAL~ 473 (536)
+|..+. ..|++++|..+|-+||.+-|+-.+.+.
T Consensus 23 ~GE~L~-~~g~~~~~~~hf~nAl~Vc~qP~~LL~ 55 (73)
T 3ax2_A 23 LGEELL-AQGDYEKGVDHLTNAIAVCGQPQQLLQ 55 (73)
T ss_dssp HHHHHH-HTTCHHHHHHHHHHHHHTCSSCHHHHH
T ss_pred HHHHHH-HCCCHHHHHHHHHHHHHHcCCHHHHHH
Confidence 444444 356666666666666666666555544
No 295
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=23.83 E-value=1.3e+02 Score=32.45 Aligned_cols=65 Identities=14% Similarity=0.213 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009385 432 NDPLLLANYAQFLYIVAH--DYDRAEEYFKRAIAV-----EPPDAESFSKYASFLWRVRNDLWAAEETFLEAIS 498 (536)
Q Consensus 432 dn~eAL~NLA~lL~e~~G--D~deAEe~FeKALeL-----DPddaeAL~nLG~~L~e~~GD~eEAee~feKALe 498 (536)
..|.++-|||.+-. ..- ....++..|.+|+.. .-.|...|..+|.++++. +++.+|..++..|-.
T Consensus 275 rYPmALgnLgDLEe-~~pt~gr~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~-~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 275 RYPMALGNLADLEE-LEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRN-RNVREALQAWADTAT 346 (550)
T ss_dssp TCHHHHHHHHHHHH-HSCCTTCCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHT-TCHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHhh-cCCCCCCCCHHHHHHHHHHHHHHHhccCCccceeecchhhhhc-chHHHHHHHHHHHHH
Confidence 45667777775422 111 112467777777764 355666677777766663 578888777777654
No 296
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=23.38 E-value=1.1e+02 Score=25.22 Aligned_cols=44 Identities=9% Similarity=0.187 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC
Q 009385 416 YFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPD 468 (536)
Q Consensus 416 yeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdd 468 (536)
-..|+.+..+|++.|-.. +|...+.. |..|+++|..++...|+.
T Consensus 13 ~~~A~~lv~~Ave~D~~g-----~y~eAl~l----Y~~Aie~ll~alk~e~d~ 56 (86)
T 4a5x_A 13 STAAATVLKRAVELDSES-----RYPQALVC----YQEGIDLLLQVLKGTKDN 56 (86)
T ss_dssp HHHHHHHHHHHHHHHHTT-----CHHHHHHH----HHHHHHHHHHHHHTCCCH
T ss_pred HHHHHHHHHHHHHHHHcC-----CHHHHHHH----HHHHHHHHHHHHhhCCCH
Confidence 345666666666653211 11211111 346667777777666553
No 297
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=23.31 E-value=3e+02 Score=28.00 Aligned_cols=85 Identities=18% Similarity=0.100 Sum_probs=52.6
Q ss_pred cCCHHHHHHHHHHHHHhC---------------CCCHH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHh-------CCCC
Q 009385 413 YADYFRTELLYQTGLAQE---------------PNDPL--LLANYAQFLYIVAHDYDRAEEYFKRAIAV-------EPPD 468 (536)
Q Consensus 413 ~gdyeeAee~YqKALeLd---------------Pdn~e--AL~NLA~lL~e~~GD~deAEe~FeKALeL-------DPdd 468 (536)
..+..+|.+++++....- -..+. +...++..+. ..+|.++|+.+++++-.. +|..
T Consensus 89 ~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl-~~~d~~~a~~~l~~~~~~l~~~~~~~~~v 167 (393)
T 4b4t_O 89 SKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYL-LKNDLVKARDLLDDLEKTLDKKDSIPLRI 167 (393)
T ss_dssp TTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHSCCSSSHH
T ss_pred cCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhhhccCCccHHH
Confidence 367888888777653221 01223 3334555555 579999999999988643 2322
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009385 469 AESFSKYASFLWRVRNDLWAAEETFLEAIS 498 (536)
Q Consensus 469 aeAL~nLG~~L~e~~GD~eEAee~feKALe 498 (536)
...++.....+++..+++.++-.++-.++.
T Consensus 168 ~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 168 TNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 333444444556667788888877777775
No 298
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=23.24 E-value=3.3e+02 Score=29.83 Aligned_cols=106 Identities=10% Similarity=0.004 Sum_probs=63.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHH--HhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCHHHHH
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANY-AQFLYI--VAHDYDRAEEYFKRAIAVEPPDAESFSKYASFLWRVRNDLWAAE 490 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NL-A~lL~e--~~GD~deAEe~FeKALeLDPddaeAL~nLG~~L~e~~GD~eEAe 490 (536)
.+.+.|...|.+.....+-+......+ ..+... ..+...++...+.++....+++.......+..+ . .+|++.|.
T Consensus 228 ~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~Al-r-~~d~~~a~ 305 (618)
T 1qsa_A 228 QDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMAL-G-TGDRRGLN 305 (618)
T ss_dssp HCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHHH-H-HTCHHHHH
T ss_pred cCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHHHH-H-CCCHHHHH
Confidence 366778888877655443333332222 222111 123256788888887765544444333344333 3 37999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009385 491 ETFLEAISADPTNSYYAANYANFLWNTGGED 521 (536)
Q Consensus 491 e~feKALeLDPdNpeal~NyA~~L~elGr~E 521 (536)
.+|++.-.-....+...+-+|..+..+|+.+
T Consensus 306 ~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~ 336 (618)
T 1qsa_A 306 TWLARLPMEAKEKDEWRYWQADLLLERGREA 336 (618)
T ss_dssp HHHHHSCTTGGGSHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHccccccccHhHHHHHHHHHHHcCCHH
Confidence 9998765533456777888888888888754
No 299
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=22.56 E-value=1.7e+02 Score=27.37 Aligned_cols=19 Identities=11% Similarity=0.149 Sum_probs=9.4
Q ss_pred CCHHHHHHHHHHHHHhCCC
Q 009385 414 ADYFRTELLYQTGLAQEPN 432 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPd 432 (536)
++|.+|.+.+..|+..-|.
T Consensus 28 ~~y~~A~~~L~~A~~~~~~ 46 (203)
T 3t5x_A 28 SDFKQAEEYLSFAFEHCHR 46 (203)
T ss_dssp TCHHHHHHHHHHHHHHSCT
T ss_pred hCHHHHHHHHHHHHHHCCH
Confidence 3455555555555554443
No 300
>2i7u_A Four-alpha-helix bundle; HOMO dimer, anesthetic binding, de novo protein/ligand binding protein complex; NMR {Synthetic} PDB: 2jst_A
Probab=22.43 E-value=27 Score=27.05 Aligned_cols=9 Identities=67% Similarity=1.538 Sum_probs=4.9
Q ss_pred cCCCCCCCC
Q 009385 311 GGNNGGGGK 319 (536)
Q Consensus 311 g~~~gggg~ 319 (536)
|||+||||.
T Consensus 28 gggggggge 36 (62)
T 2i7u_A 28 GGGGGGGGE 36 (62)
T ss_dssp CSSCSSSCH
T ss_pred cCCCCchHH
Confidence 455555554
No 301
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=21.60 E-value=1.4e+02 Score=24.81 Aligned_cols=46 Identities=11% Similarity=0.196 Sum_probs=27.8
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH
Q 009385 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAVEPPDA 469 (536)
Q Consensus 415 dyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeLDPdda 469 (536)
-..+|+.+..+|++.|-. -+|..++.. |..|+++|.++++..|+..
T Consensus 11 ~l~~Ai~lv~~Ave~D~~-----g~y~eAl~~----Y~~Aie~l~~alk~e~~~~ 56 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAE-----SRYQQALVC----YQEGIDMLLQVLKGTKESS 56 (93)
T ss_dssp HHHHHHHHHHHHHHHHHT-----TCHHHHHHH----HHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHHHHHh-----CCHHHHHHH----HHHHHHHHHHHHHHCCCHH
Confidence 456777788888776432 112222221 4578888888888776644
No 302
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=21.41 E-value=2e+02 Score=26.98 Aligned_cols=50 Identities=16% Similarity=0.019 Sum_probs=40.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Q 009385 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRAEEYFKRAIAV 464 (536)
Q Consensus 414 gdyeeAee~YqKALeLdPdn~eAL~NLA~lL~e~~GD~deAEe~FeKALeL 464 (536)
+..++-.+.+...+..++-+++++..+|.+|. ..|+..+|.+.+++|-+.
T Consensus 105 ~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~-Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 105 GKRDKLEEIGREILKNNEVSASILVAIANALR-RVGDERDATTLLIEACKK 154 (172)
T ss_dssp TCHHHHHHHHHHHC--CCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHT
T ss_pred ccHhHHHHHHHHHhccCCCChHHHHHHHHHHH-HhcchhhHHHHHHHHHHh
Confidence 56777777777777777778999999998877 799999999999998653
No 303
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=20.84 E-value=58 Score=27.55 Aligned_cols=51 Identities=20% Similarity=0.219 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009385 466 PPDAESFSKYASFLWRVRNDLWAAEETFLEAISADPTNSYYAANYANFLWN 516 (536)
Q Consensus 466 PddaeAL~nLG~~L~e~~GD~eEAee~feKALeLDPdNpeal~NyA~~L~e 516 (536)
|+++..+...+..+-..-++.-+++.--.++|+.+|+||..+..|-..+.+
T Consensus 6 ~~~~~sLd~v~~~f~~ga~~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~e 56 (85)
T 2ca5_A 6 PNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSE 56 (85)
T ss_dssp --------------CCHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
No 304
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.76 E-value=63 Score=28.69 Aligned_cols=19 Identities=5% Similarity=-0.135 Sum_probs=10.6
Q ss_pred HHHHHHHHHHcCCCccccC
Q 009385 507 AANYANFLWNTGGEDTCFP 525 (536)
Q Consensus 507 l~NyA~~L~elGr~E~clp 525 (536)
.-|+..+.-+++..+...+
T Consensus 81 ~~nL~~v~~RL~~Le~~~~ 99 (116)
T 2dl1_A 81 KETLQNVRTRLEILEKGLA 99 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhcCC
Confidence 3466666666665544443
Done!