lac1 protein (Populus trichocarpa)

STRING 9.05

lac1 protein (Populus trichocarpa) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	lac1	SubName- Full=Laccase; EC=1.10.3.2; Flags- Fragment; (557 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XVIII.3152.1	cellulose synthase (EC-2.4.1.12) (1041 aa)	•	0.510
	gw1.XV.2559.1	iron superoxide dismutase (EC-1.15.1.1); Destroys radicals which are normally produced within t [...] (223 aa)	•	0.510
	gw1.V.3253.1	iron superoxide dismutase (EC-1.15.1.1); Destroys radicals which are normally produced within t [...] (223 aa)	•	0.510
	grail3.0095006301	RecName- Full=Superoxide dismutase; EC=1.15.1.1;; Destroys radicals which are normally produced [...] (230 aa)	•	0.510
	fgenesh4_pg.C_LG_VI001789	cellulose synthase (EC-2.4.1.12) (1075 aa)	•	0.510
	eugene3.00040363	cellulose synthase (EC-2.4.1.12) (1015 aa)	•	0.510
	eugene3.00020623	cellulose synthase (EC-2.4.1.12) (1093 aa)	•	0.510
	eugene3.00002636	cellulose synthase (EC-2.4.1.12) (1043 aa)	•	0.510
	estExt_fgenesh4_pm.C_LG_XVIII0125	cellulose synthase (EC-2.4.1.12) (1084 aa)	•	0.510
	estExt_Genewise1_v1.C_LG_XIII3158	manganese superoxide dismutase (EC-1.15.1.1); Destroys radicals which are normally produced wit [...] (226 aa)	•	0.510

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: very high (>100%)

Permalink