BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009392
(535 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 145/519 (27%), Positives = 229/519 (44%), Gaps = 60/519 (11%)
Query: 22 RVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYN-VTIHW 80
++RHYK+ V C+ ++ +N +FPGPT+ A D+V+V++ N + V IHW
Sbjct: 2 QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHW 61
Query: 81 HGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLR-ATVHGAIV 139
HG+ Q T WADG A I+QC I G ++ YNFT+ GT +H H+ R A ++G+++
Sbjct: 62 HGILQRGTPWADGTASISQCAINPGETFFYNFTVDNP-GTFFYHGHLGMQRSAGLYGSLI 120
Query: 140 ILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAP---------------- 183
+ P +G PF E+ ++L++WW +++ Q + P
Sbjct: 121 VDPPQGKKEPF-HYDGEINLLLSDWWH---QSIHKQEVGLSSKPIRWIGEPQTILLNGRG 176
Query: 184 ----NVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKL 239
+++ + N +P + S + V KTY +RI + L F I H+L
Sbjct: 177 QFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236
Query: 240 TVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKT-SGKYLVAASPFMDAPIAVDNVTAT 298
VVE D YV+PF T +I I G++ +VL++ D+ S Y V+ P +T
Sbjct: 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLL 296
Query: 299 ATLHYSGXXXXXXXXXXXXPPKNGTAIANKFIDSLR-------SLNSKKYPAKVPQTVDH 351
L S PP+ T + F S ++ S K P K + +
Sbjct: 297 NYLPNS-----VSKLPTSPPPQ--TPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRI-- 347
Query: 352 NLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNP 411
L +N V +IN+V+ +P L A +N+ F + P
Sbjct: 348 -FLLNTQNVIN----------GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEV 396
Query: 412 -PHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAP---ENHPVHLHGFNFFA 467
P Y+ P N +T G Y+ V +ILQ+ ++ E HP HLHG +F+
Sbjct: 397 FPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWV 456
Query: 468 VGKGLGXXXXXXXXXXXXLVDPVERNTIGVPSGGWVAIR 506
+G G G L +P RNT+ + GW AIR
Sbjct: 457 LGYGDG-KFSAEEESSLNLKNPPLRNTVVIFPYGWTAIR 494
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 197/468 (42%), Gaps = 69/468 (14%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVV----NHVKYNVT-IHWHGVRQLRTGWADGPAYITQ 99
+ VN FP P + ++ D + VV NH T IHWHG Q T WADGPA++ Q
Sbjct: 25 IVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQ 84
Query: 100 CPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT-VHGAIVIL-PKRGVPYPFPKPHKEV 157
CPI SGHS++Y+F + Q GT +H+H+ + G V+ PK + ++
Sbjct: 85 CPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPKDPHASRYDVDNEST 144
Query: 158 VVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTY 217
V+ L +W+ T A + G +D+ ING G +S + + V GK Y
Sbjct: 145 VITLTDWYH--TAARLGPRFPLG-----ADATLINGL-GRSASTPTAALAVINVQHGKRY 196
Query: 218 MLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGK 277
R+++ + + F I GH LTV+EVD +P D+I I Q + +L+A++T G
Sbjct: 197 RFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVGN 256
Query: 278 YLVAASPFMDAPIAVDNVTATATLHYSGXXXXXXXXXXXXPPKNGTAIANKFIDSLRSLN 337
Y + A+P + +A L Y G T++ +L L
Sbjct: 257 YWIRANPNFGT-VGFAGGINSAILRYQGAPVAEPTTTQT------TSVIPLIETNLHPLA 309
Query: 338 SKKYPAK-VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTI-ALLQAH 395
P P VD L NG+ INN +F PT+ LLQ
Sbjct: 310 RMPVPGSPTPGGVDKALNLAFNF-----------NGTNFF--INNASFTPPTVPVLLQI- 355
Query: 396 FFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPEN 455
+SG T ++L + Y L +ST+++ L T +
Sbjct: 356 ---LSGAQTA----------------QDLLPAG--SVYPLPAHSTIEITLPATALAPGAP 394
Query: 456 HPVHLHGFNFFAVGKGLGXXXXXXXXXXXXLVDPVERNTI--GVPSGG 501
HP HLHG + FAV + G DP+ R+ + G P+ G
Sbjct: 395 HPFHLHG-HAFAVVRSAGSTTYNYN-------DPIFRDVVSTGTPAAG 434
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 187/445 (42%), Gaps = 76/445 (17%)
Query: 41 SKPIVTVNRKFPGPTLYAREHDTVLVKVV----NHVKYNVT-IHWHGVRQLRTGWADGPA 95
S+ + VN FP P + + D + V+ NH T IHWHG Q T WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 96 YITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT-VHGAIVILPKRGVPYPFPKPH 154
++ QCPI +GH+++Y+F + Q GT +H+H+ + G IV+ Y PH
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVV-------YDPQDPH 133
Query: 155 KEV--------VVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGG 206
K + V+ LA+W+ + A + G +D+ ING I + ++
Sbjct: 134 KSLYDVDDDSTVITLADWY--------HLAAKVGSPVPTADATLINGLGRSIDTLNADLA 185
Query: 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTN 266
+ V GK Y R+++ + + F I GH LTV+E D+ +KP D+I I Q +
Sbjct: 186 -VITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQRYS 244
Query: 267 VLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGXXXXXXXXXXXXPPKNGTAIA 326
+L+AD+ G Y + A P D +A L Y G P + T
Sbjct: 245 FVLNADQDVGNYWIRALP-NSGTRNFDGGVNSAILRYDG-------AAPVEPTTSQTPST 296
Query: 327 NKFIDS-LRSLNSKKYPAK-VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTF 384
N ++S L +L P P VD L G G + +IN +F
Sbjct: 297 NPLVESALTTLEGTAAPGSPAPGGVDLALNMAFGFA-----------GGKF--TINGASF 343
Query: 385 VMPTI-ALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQL 443
PT+ LLQ +SG + ++L S Y L N+ +++
Sbjct: 344 TPPTVPVLLQI----LSGAQSA----------------QDLLPSG--SVYSLPANADIEI 381
Query: 444 ILQDTGIIAPENHPVHLHGFNFFAV 468
L T HP HLHG F V
Sbjct: 382 SLPATAAAPGFPHPFHLHGHTFAVV 406
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 204/484 (42%), Gaps = 79/484 (16%)
Query: 41 SKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-----YNVTIHWHGVRQLRTGWADGPA 95
++ V N FPGP + + D + V++++ TIHWHG+ Q T WADGPA
Sbjct: 21 TRAAVVANGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWHGLFQHGTNWADGPA 80
Query: 96 YITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT-VHGAIVIL-PKRGVPYPFPKP 153
++ QCPI SG+S++Y+FT+ Q GT +H+H+ + G +V+ P +
Sbjct: 81 FVNQCPIASGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYDPSDPYASMYDVD 140
Query: 154 HKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDS 213
V+ L++W+ + + L PN +DS ING G + ++ + V+
Sbjct: 141 DDTTVITLSDWYHTAAK------LGPAFPPN-ADSVLINGL-GRFAGGNASDLAVITVEQ 192
Query: 214 GKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADK 273
K Y R+++ + + F I GH +T++EVD +P + D+I I Q + +L+A +
Sbjct: 193 NKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFASQRYSFVLNATQ 252
Query: 274 TSGKYLVAASPFMDAPIAVDNVTATATLHYSGXXXXXXXXXXXXPPKNGTAIANKFIDS- 332
+ Y + A P I +A L YSG P N T +++
Sbjct: 253 SVDNYWIRAIPNT-GTIDTTGGLNSAILRYSG-------ADIVDPTANATTSVIPLVETD 304
Query: 333 LRSLNSKKYPAK-VPQTVD--HNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTI 389
L L+S P V VD NL F+ NG+ INN T + PT+
Sbjct: 305 LVPLDSPAAPGDPVVGGVDLAMNLDFSF-------------NGTNFF--INNETLIPPTV 349
Query: 390 -ALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDT 448
LLQ +G Y L NST++L T
Sbjct: 350 PVLLQI----------------------LSGAQSASDLLPTGSVYTLPLNSTIELSFPIT 387
Query: 449 GIIAPEN-----HPVHLHGFNFFAVGKGLGXXXXXXXXXXXXLVDPVERNTIGVPS-GGW 502
+ N HP HLHG + F+V + G V+PV R+T+ + G
Sbjct: 388 TVNGVTNAPGAPHPFHLHG-HAFSVVRSAG-------SSDYNYVNPVRRDTVSTGNPGDN 439
Query: 503 VAIR 506
V IR
Sbjct: 440 VTIR 443
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 189/472 (40%), Gaps = 70/472 (14%)
Query: 41 SKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV-----TIHWHGVRQLRTGWADGPA 95
+ + VN FP P + D + +VN + + +IHWHG Q T WADGPA
Sbjct: 21 ERAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPA 80
Query: 96 YITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT-VHGAIVIL-PKRGVPYPFPKP 153
+I QCPI SG+S++Y+F + GQ GT +H+H+ + G V+ P +
Sbjct: 81 FINQCPIASGNSFLYDFQVPGQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHANLYDVD 140
Query: 154 HKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDS 213
+ V+ LA+W+ A + G +DS ING G +S + + V
Sbjct: 141 DESTVITLADWYH--VAAKLGPRFPKG-----ADSTLINGL-GRSTSTPTADLAVISVTK 192
Query: 214 GKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADK 273
GK Y R+++ + + F I H+LTV+E D +P D+I I Q + +L+A++
Sbjct: 193 GKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSFVLNANQ 252
Query: 274 TSGKYLVAASPFMDAPIAVDNVTATATLHYSGXXXXXXXXXXXXPPKNGTAIANKFIDSL 333
Y + A+P D V +A L Y P N T L
Sbjct: 253 DVDNYWIRANPNFGTTGFADGVN-SAILRYDD-------ADPVEPVTNQTGTTLLLETDL 304
Query: 334 RSLNSKKYPAKVPQ-TVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTI-AL 391
L S P Q D NL +G+ IN +F PT+ L
Sbjct: 305 HPLTSMPVPGNPTQGGADLNLNMAFNF-----------DGTNFF--INGESFTPPTVPVL 351
Query: 392 LQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGII 451
LQ ISG T ++L S Y L NS++++ T
Sbjct: 352 LQI----ISGA----------------NTAQDLLPSG--SVYSLPSNSSIEITFPATTAA 389
Query: 452 APENHPVHLHGFNFFAVGKGLGXXXXXXXXXXXXLVDPVERNTI--GVPSGG 501
HP HLHG + FAV + G DPV R+ + G P G
Sbjct: 390 PGAPHPFHLHG-HVFAVVRSAGSTSYNYD-------DPVWRDVVSTGTPQAG 433
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 129/272 (47%), Gaps = 16/272 (5%)
Query: 41 SKPIVTVNRKFPGPTLYAREHDTVLVKVV----NHVKYNVT-IHWHGVRQLRTGWADGPA 95
S+ V VN PGP + D + V+ NH T IHWHG Q T WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 96 YITQCPIQSGHSYVYNFTITGQRGTLLWHAHI--LWLRATVHGAIVILPKRGVPYPFPKP 153
+I QCPI GHS++Y+F + Q GT +H+H+ + +V P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 154 HKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDS 213
+ + V+ LA+W+ T A + G +D+ ING+ G S S + V
Sbjct: 141 NDDTVITLADWYH--TAAKLGPRFPGG-----ADATLINGK-GRAPSDSVAELSVIKVTK 192
Query: 214 GKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADK 273
GK Y R+++ + N F I GH LT++EVD+ +P + D+I I Q + +L A++
Sbjct: 193 GKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQ 252
Query: 274 TSGKYLVAASPFMDAPIAVDNVTATATLHYSG 305
Y + A+P + D +A L Y G
Sbjct: 253 AVDNYWIRANPNF-GNVGFDGGINSAILRYDG 283
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 131/272 (48%), Gaps = 16/272 (5%)
Query: 41 SKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-----YNVTIHWHGVRQLRTGWADGPA 95
S+ V VN PGP + D + V++++ + +IHWHG Q T WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 96 YITQCPIQSGHSYVYNFTITGQRGTLLWHAHI--LWLRATVHGAIVILPKRGVPYPFPKP 153
+I QCPI GHS++Y+F + Q GT +H+H+ + +V P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 154 HKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDS 213
+ + V+ LA+W+ T A + G +D+ ING+ G S S + V
Sbjct: 141 NDDTVITLADWYH--TAAKLGPRFPGG-----ADATLINGK-GRAPSDSVAELSVIKVTK 192
Query: 214 GKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADK 273
GK Y R+++ + N F I GH LT++EVD+ +P + D+I I Q + +L A++
Sbjct: 193 GKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQ 252
Query: 274 TSGKYLVAASPFMDAPIAVDNVTATATLHYSG 305
Y + A+P + D +A L Y G
Sbjct: 253 AVDNYWIRANPNF-GNVGFDGGINSAILRYDG 283
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 181/443 (40%), Gaps = 63/443 (14%)
Query: 41 SKPIVTVNRKFPGPTLYAREHDTVLVKVV----NHVKYNVT-IHWHGVRQLRTGWADGPA 95
S+ + VN FP P + + D + V+ NH T IHWHG Q T WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 96 YITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT-VHGAIVIL-PKRGVPYPFPKP 153
++ QCPI +GH+++Y+F + Q GT +H+H+ + G IV+ P +
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPNDPHASLYDVD 140
Query: 154 HKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDS 213
V+ LA+W+ + A + G +D+ ING G ++ + + V
Sbjct: 141 DDSTVITLADWY--------HLAAKVGAPVPTADATLINGL-GRSAATLAADLAVITVTK 191
Query: 214 GKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADK 273
GK Y R+++ + + F I GH LTV+E D+ +KP D++ I Q + +L+AD+
Sbjct: 192 GKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQ 251
Query: 274 TSGKYLVAASPFMDAPIAVDNVTATATLHYSGXXXXXXXXXXXXPPKNGTAIANKFIDS- 332
Y + A P T +A L Y G P + T N ++S
Sbjct: 252 DVDNYWIRALP-NSGTQNFAGGTNSAILRYDGAAPVE-------PTTSQTPSTNPLVESA 303
Query: 333 LRSLNSKKYPAK-VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTI-A 390
L +L P P VD L G GN +IN +F PT+
Sbjct: 304 LTTLKGTAAPGSPTPGGVDLALNMAFGFA--------GGN-----FTINGASFTPPTVPV 350
Query: 391 LLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGI 450
LLQ +G Y L N+ +++ L T
Sbjct: 351 LLQI----------------------LSGAQSAADLLPAGSVYSLPANADIEISLPATAA 388
Query: 451 IAPENHPVHLHGFNFFAVGKGLG 473
HP HLHG + FAV + G
Sbjct: 389 APGFPHPFHLHG-HVFAVVRSAG 410
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 181/443 (40%), Gaps = 63/443 (14%)
Query: 41 SKPIVTVNRKFPGPTLYAREHDTVLVKVV----NHVKYNVT-IHWHGVRQLRTGWADGPA 95
S+ + VN FP P + + D + V+ NH T IHWHG Q T WADGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 96 YITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT-VHGAIVIL-PKRGVPYPFPKP 153
++ QCPI +GH+++Y+F + Q GT +H+H+ + G IV+ P +
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPNDPHASLYDVD 140
Query: 154 HKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDS 213
V+ LA+W+ + A + G +D+ ING G ++ + + V
Sbjct: 141 DDSTVITLADWY--------HLAAKVGAPVPTADATLINGL-GRSAATLAADLAVITVTK 191
Query: 214 GKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADK 273
GK Y R+++ + + F I GH LTV+E D+ +KP D++ I Q + +L+AD+
Sbjct: 192 GKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQ 251
Query: 274 TSGKYLVAASPFMDAPIAVDNVTATATLHYSGXXXXXXXXXXXXPPKNGTAIANKFIDS- 332
Y + A P T +A L Y G P + T N ++S
Sbjct: 252 DVDNYWIRALP-NSGTQNFAGGTNSAILRYDGAAPVE-------PTTSQTPSTNPLVESA 303
Query: 333 LRSLNSKKYPAK-VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTI-A 390
L +L P P VD L G GN +IN +F PT+
Sbjct: 304 LTTLKGTAAPGSPTPGGVDLALNMAFGFA--------GGN-----FTINGASFTPPTVPV 350
Query: 391 LLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGI 450
LLQ +G Y L N+ +++ L T
Sbjct: 351 LLQI----------------------LSGAQSAADLLPAGSVYSLPANADIEISLPATAA 388
Query: 451 IAPENHPVHLHGFNFFAVGKGLG 473
HP HLHG + FAV + G
Sbjct: 389 APGFPHPFHLHG-HVFAVVRSAG 410
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 129/272 (47%), Gaps = 16/272 (5%)
Query: 41 SKPIVTVNRKFPGPTLYAREHDTVLVKVV----NHVKYNVT-IHWHGVRQLRTGWADGPA 95
S+ V VN PGP + D + V+ NH T +HWHG Q T WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 96 YITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT-VHGAIVIL-PKRGVPYPFPKP 153
+I QCPI GHS++Y+F + Q GT +H+H+ + G V+ P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 154 HKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDS 213
+ + + LA+W+ T A + A PN +DS ING+ G S SS + V
Sbjct: 141 NDDTTITLADWYH--TAAKLGPAF-----PNGADSTLINGK-GRAPSDSSAQLSVVSVTK 192
Query: 214 GKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADK 273
GK R+++ + + F I GH T++E D+ +P TD+I I Q + L+A++
Sbjct: 193 GKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYSFTLNANQ 252
Query: 274 TSGKYLVAASPFMDAPIAVDNVTATATLHYSG 305
Y + A+P + + +A L Y G
Sbjct: 253 AVDNYWIRANPNF-GNVGFNGGINSAILRYDG 283
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 141/287 (49%), Gaps = 20/287 (6%)
Query: 29 NVVMKNSTKLCS--SKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-----YNVTIHWH 81
N+V+ N+ S+ V VN PGP + + D + V+N++ + ++HWH
Sbjct: 7 NLVVTNAAVAADGHSRDAVVVNGGTPGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWH 66
Query: 82 GVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHI--LWLRATVHGAIV 139
G Q T WADGPA++ QCPI +G S++Y+F+ Q GT +H+H+ + +V
Sbjct: 67 GFFQKGTNWADGPAFVNQCPIAAGSSFLYDFSTPIQAGTFWYHSHLSTQYCDGDRGPFVV 126
Query: 140 ILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLA-PNVSDSHTINGQPGPI 198
P + + V+ L +W+ + A Q+G A P +D+ INGQ G
Sbjct: 127 YDPNDPSANLYDVDNLNTVITLTDWYHT--------AAQNGPAKPGGADATLINGQ-GRG 177
Query: 199 SSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIV 258
S S + V +GK Y R+++ + + F I GH++T+++VD+ V+P I
Sbjct: 178 PSSPSADLAVISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQ 237
Query: 259 IAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSG 305
I Q + +L+A++ Y + A+P + N +A L YSG
Sbjct: 238 IYAAQRYSFILNANQAVNNYWIRANP-NQGNVGFTNGINSAILRYSG 283
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 132/272 (48%), Gaps = 16/272 (5%)
Query: 41 SKPIVTVNRKFPGPTLYAREHDTVLVKVV----NHVKYNVT-IHWHGVRQLRTGWADGPA 95
S+ V VN PGP + D + V+ NH T +HWHG Q T WADGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 96 YITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT-VHGAIVIL-PKRGVPYPFPKP 153
+I QCPI GHS++Y+F + Q GT +H+H+ + G V+ P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVD 140
Query: 154 HKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDS 213
+ + V+ LA+W+ T A + +G +D+ ING+ G S +S + V
Sbjct: 141 NDDTVITLADWYH--TAAKLGPRFPAG-----ADATLINGK-GRAPSDTSAELSVIKVTK 192
Query: 214 GKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADK 273
GK R+++ + + F I GH LT++EVD++ +P D+I I Q + +L+A++
Sbjct: 193 GKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFVLNANQ 252
Query: 274 TSGKYLVAASPFMDAPIAVDNVTATATLHYSG 305
Y + A+P + + +A L Y G
Sbjct: 253 AVDNYWIRANPNF-GNVGFNGGINSAILRYDG 283
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 123/251 (49%), Gaps = 15/251 (5%)
Query: 41 SKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-----YNVTIHWHGVRQLRTGWADGPA 95
S+ V VN PGP + D + V++++ + +IHWHG Q T WADGPA
Sbjct: 21 SRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPA 80
Query: 96 YITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT-VHGAIVIL-PKRGVPYPFPKP 153
+I QCPI SGHS++Y+F + Q GT +H+H+ + G V+ P +
Sbjct: 81 FINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPAADLYDVD 140
Query: 154 HKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDS 213
+ + V+ L +W+ A + A G +D+ ING+ G S ++ + V
Sbjct: 141 NDDTVITLVDWYH--VAAKLGPAFPLG-----ADATLINGK-GRSPSTTTADLSVISVTP 192
Query: 214 GKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADK 273
GK Y R+++ + + F I GH +T++E D+ P D+I I Q + +L A++
Sbjct: 193 GKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYSFVLEANQ 252
Query: 274 TSGKYLVAASP 284
Y + A+P
Sbjct: 253 AVDNYWIRANP 263
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 177/434 (40%), Gaps = 60/434 (13%)
Query: 42 KPIVTVNRKFPGPTLYAREHDTVLVKVVNHV-----KYNVTIHWHGVRQLRTGWADGPAY 96
+P V FPGP + D + N + + +IHWHG Q T WADGPA+
Sbjct: 23 RPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF 82
Query: 97 ITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT-VHGAIVIL-PKRGVPYPFPKPH 154
ITQCPI G+S+ YNF + G GT +H+H+ + G V+ P +
Sbjct: 83 ITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDD 142
Query: 155 KEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSG 214
++ LA+W+ V+ + + +G A +DS I+G + ++ + V+ G
Sbjct: 143 DTTIITLADWYH-----VLAKEMGAGGAI-TADSTLIDGLGRTHVNVAAVPLSVITVEVG 196
Query: 215 KTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKT 274
K Y +R+++ + + F I GH +T++E D + D I I Q + +L+A++
Sbjct: 197 KRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQP 256
Query: 275 SGKYLVAASPFMDAPIAVDNVTATATLHYSGXXXXXXXXXXXXPPKNGTAIANKFI--DS 332
G Y + A+P D +A L Y G P + + K +
Sbjct: 257 VGNYWIRANPNSGGE-GFDGGINSAILRYDG-------ATTADPVTVASTVHTKCLIETD 308
Query: 333 LRSLNSKKYPAKVPQ-TVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIAL 391
L L+ P Q D NL ++G G+ V IN V+F PT+ +
Sbjct: 309 LHPLSRNGVPGNPHQGGADCNLNLSLGFAC----------GNFV---INGVSFTPPTVPV 355
Query: 392 LQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGII 451
L + T +L S L NST+++ L
Sbjct: 356 LL-------------------QICSGANTAADLLPSG--SVISLPSNSTIEIALPAGAAG 394
Query: 452 APENHPVHLHGFNF 465
P HP HLHG +F
Sbjct: 395 GP--HPFHLHGHDF 406
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 192/477 (40%), Gaps = 80/477 (16%)
Query: 41 SKPIVTVNRKFPGPTLYAREHDTVLVKVVNHV-----KYNVTIHWHGVRQLRTGWADGPA 95
++ VT P + D + V++ + + +IHWHG Q T DGPA
Sbjct: 42 ARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPA 101
Query: 96 YITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT-VHGAIVILPKRGVPYPFPKPH 154
++ QCPI S+VY+F + GQ GT +H+H+ + GA V+ Y PH
Sbjct: 102 FVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVV-------YDPNDPH 154
Query: 155 --------KEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGG 206
V+ +A+W+ S + + ++ A D+ ING G S+ S G
Sbjct: 155 LSLYDVDDASTVITIADWYHSLSTVLFPNPNKAPPA---PDTTLINGL-GRNSANPSAGQ 210
Query: 207 FT-LPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTT 265
+ V SGK Y RI++ + F I GH++TV+EVD +P D++ I GQ
Sbjct: 211 LAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRY 270
Query: 266 NVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGXXXXXXXXXXXXPPKNGTAI 325
+V++ A++ G Y + A+P + +A Y G +GTA+
Sbjct: 271 SVVVEANQAVGNYWIRANP-SNGRNGFTGGINSAIFRYQGAAVAEPTTSQ----NSGTAL 325
Query: 326 ANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFV 385
+ L + + P VP D NL +G N + +IN F+
Sbjct: 326 NEANLIPLINPGAPGNP--VPGGADINLNLRIGR-----------NATTADFTINGAPFI 372
Query: 386 MPTI-ALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLI 444
PT+ LLQ +SGV P +L G L N +++
Sbjct: 373 PPTVPVLLQI----LSGV----------------TNPNDLLP--GGAVISLPANQVIEIS 410
Query: 445 LQDTGIIAPENHPVHLHGFNFFAVGKGLGXXXXXXXXXXXXLVDPVERNTIGVPSGG 501
+ G NHP HLHG NF V V+PV R+ + + GG
Sbjct: 411 IPGGG-----NHPFHLHGHNFDVV--------RTPGSSVYNYVNPVRRDVVSIGGGG 454
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 21/254 (8%)
Query: 41 SKPIVTVNRKFPGPTLYAREHD----TVLVKVVNHVKYNVT-IHWHGVRQLRTGWADGPA 95
++ V VN P P + + D V+ ++ NH + IHWHG Q T WADGPA
Sbjct: 21 AREAVVVNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGFFQQGTNWADGPA 80
Query: 96 YITQCPIQSGHSYVYNFTITGQRGTLLWHAHI--LWLRATVHGAIVILPKRGVPYPFPKP 153
++ QCPI SGHS++Y+F + Q GT +H+H+ + +V P +
Sbjct: 81 FVNQCPIASGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASLYDID 140
Query: 154 HKEVVVVLAEWWKSDTEAVINQALQSGLAPNV---SDSHTINGQPGPISSCSSQGGFTLP 210
+ + V+ LA+W+ + + L P SDS ING G + + +
Sbjct: 141 NDDTVITLADWYH----------VAAKLGPRFPFGSDSTLINGL-GRTTGIAPSDLAVIK 189
Query: 211 VDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLS 270
V GK Y R+++ + + F I H +T++E D+ +P + D+I I Q + +L
Sbjct: 190 VTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSFVLD 249
Query: 271 ADKTSGKYLVAASP 284
A + Y + A+P
Sbjct: 250 ASQPVDNYWIRANP 263
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 192/476 (40%), Gaps = 91/476 (19%)
Query: 53 GPTLYAREHDTVLVKVVNHVK-----YNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHS 107
GP + ++D + VVN + +IHWHG+ Q T WADG + QCPI GH+
Sbjct: 33 GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHA 92
Query: 108 YVYNFTITGQRGTLLWHAHI-LWLRATVHGAIVILPKRGVPYP--FPKPHKEVVVVLAEW 164
++Y FT G GT +H+H + G +VI P+ + + + ++ LA+W
Sbjct: 93 FLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDND-PHAALYDEDDENTIITLADW 151
Query: 165 WKSDTEAVINQALQSGLAPNVSDSHTINGQ----PGPISSCSSQGGFTLPVDSGKTYMLR 220
+ + ++Q P D+ ING+ GP + S + V+ GK Y +R
Sbjct: 152 YH-----IPAPSIQGAAQP---DATLINGKGRYVGGPAAELS-----IVNVEQGKKYRMR 198
Query: 221 IINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLV 280
+I+ + + F I GH+LT++EVD +P D + I GQ + +L A++ Y +
Sbjct: 199 LISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWI 258
Query: 281 AASPFMDA---PIAVDNVTATATLHYSGXXXXXXXXXXXXPPKNGTAIANKFIDSLRSLN 337
A P N +A L Y+G P A N+ L +L
Sbjct: 259 RAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP----AQLNEA--DLHALI 312
Query: 338 SKKYPA-KVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTI-ALLQAH 395
P P D NL F +G +G R +IN + P++ LLQ
Sbjct: 313 DPAAPGIPTPGAADVNLRFQLGF-----------SGGRF--TINGTAYESPSVPTLLQI- 358
Query: 396 FFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSN----GTKAYRLAYNSTVQLILQDTGII 451
+SG Q++N Y L N V+L++ +
Sbjct: 359 ---MSGA----------------------QSANDLLPAGSVYELPRNQVVELVVPAGVLG 393
Query: 452 APENHPVHLHGFNFFAVGKGLGXXXXXXXXXXXXLVDPVERNTIGVP-SGGWVAIR 506
P HP HLHG F V V+PV+R+ + + +G V IR
Sbjct: 394 GP--HPFHLHGHAFSVV--------RSAGSSTYNFVNPVKRDVVSLGVTGDEVTIR 439
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 192/476 (40%), Gaps = 91/476 (19%)
Query: 53 GPTLYAREHDTVLVKVVNHVK-----YNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHS 107
GP + ++D + VVN + +IHWHG+ Q T WADG + QCPI GH+
Sbjct: 33 GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHA 92
Query: 108 YVYNFTITGQRGTLLWHAHI-LWLRATVHGAIVILPKRGVPYP--FPKPHKEVVVVLAEW 164
++Y FT G GT +H+H + G +VI P+ + + + ++ LA+W
Sbjct: 93 FLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDND-PHAALYDEDDENTIITLADW 151
Query: 165 WKSDTEAVINQALQSGLAPNVSDSHTINGQ----PGPISSCSSQGGFTLPVDSGKTYMLR 220
+ + ++Q P D+ ING+ GP + S + V+ GK Y +R
Sbjct: 152 YH-----IPAPSIQGAAQP---DATLINGKGRYVGGPAAELS-----IVNVEQGKKYRMR 198
Query: 221 IINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLV 280
+I+ + + F I GH+LT++EVD +P D + I GQ + +L A++ Y +
Sbjct: 199 LISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWI 258
Query: 281 AASPFMDA---PIAVDNVTATATLHYSGXXXXXXXXXXXXPPKNGTAIANKFIDSLRSLN 337
A P N +A L Y+G P A N+ L +L
Sbjct: 259 RAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP----AQLNEA--DLHALI 312
Query: 338 SKKYPA-KVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTI-ALLQAH 395
P P D NL F +G +G R +IN + P++ LLQ
Sbjct: 313 DPAAPGIPTPGAADVNLRFQLGF-----------SGGRF--TINGTAYESPSVPTLLQI- 358
Query: 396 FFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSN----GTKAYRLAYNSTVQLILQDTGII 451
+SG Q++N Y L N V+L++ +
Sbjct: 359 ---MSGA----------------------QSANDLLPAGSVYELPRNQVVELVVPAGVLG 393
Query: 452 APENHPVHLHGFNFFAVGKGLGXXXXXXXXXXXXLVDPVERNTIGVP-SGGWVAIR 506
P HP HLHG F V V+PV+R+ + + +G V IR
Sbjct: 394 GP--HPFHLHGHAFSVV--------RSAGSSTYNFVNPVKRDVVSLGVTGDEVTIR 439
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 173/434 (39%), Gaps = 52/434 (11%)
Query: 41 SKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-YNVTIHWHGVRQLRTGWADGPAYITQ 99
S+P++T N +FP P + + D V + + N + N ++H+HG+ Q T DG ++TQ
Sbjct: 21 SRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80
Query: 100 CPIQSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVV 159
CPI G + +YNFT+ GT +H+H + I+ PY + +E+ +
Sbjct: 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSFPYDYD---EELSL 137
Query: 160 VLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISS-CSSQGGFTLPVDSGKTYM 218
L+EW+ D + ++ S P +P P + ++ T V TY+
Sbjct: 138 SLSEWYH-DLVTDLTKSFMSVYNP-------TGAEPIPQNLIVNNTMNLTWEVQPDTTYL 189
Query: 219 LRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKY 278
LRI+N +F I H++TVVE+D + TD + I Q VL+ + K
Sbjct: 190 LRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKN 249
Query: 279 LVAASPFMDAPIAVDNVTATATLHYSGXXXXXXXXXXXXPPKNGTAIANKFIDSLRSLNS 338
F D + V + L + P +N + F+D
Sbjct: 250 FAIMQKFDDTMLDV----IPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPY 305
Query: 339 KKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFN 398
+K + DH + V + NG A NN+T+ P + L
Sbjct: 306 EK--EAIYGEPDHVITVDVVMD-------NLKNGVN-YAFFNNITYTAPKVPTLMT---- 351
Query: 399 ISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLIL--QDTGIIAPENH 456
V ++ N Y + T + L + V+++L QDTG H
Sbjct: 352 ---VLSSGDQANNSEIY-----------GSNTHTFILEKDEIVEIVLNNQDTGT-----H 392
Query: 457 PVHLHGFNFFAVGK 470
P HLHG F + +
Sbjct: 393 PFHLHGHAFQTIQR 406
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 131/289 (45%), Gaps = 14/289 (4%)
Query: 24 RHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVT-IHWHG 82
R Y +V T ++ +T N PGP + A D +++ V N++++N T IHWHG
Sbjct: 68 REYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHG 127
Query: 83 VRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHI-LWLRATVHGAIVIL 141
+RQL + DG +TQCPI G + Y F +T Q GT +H+H L + G ++I
Sbjct: 128 IRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPLIIN 186
Query: 142 PKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDS-----HTINGQPG 196
Y ++V V+ + W ++ I + G P + ++ +T +
Sbjct: 187 GPATADY-----DEDVGVIFLQDWAHESVFEIWDTARLGAPPALENTLMNGTNTFDCSAS 241
Query: 197 PISSCSSQGG-FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTD 255
+C G F L G Y LR+IN ++ F I H LTV+ D + P+ TD
Sbjct: 242 TDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTD 301
Query: 256 NIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYS 304
++I GQ +V++ A+ + Y + + + AT L Y
Sbjct: 302 TLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYD 350
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 456 HPVHLHGFNFFAVGKGLGXXXXXXXXXXXXLVDPVERNTIGVPSGGWVAI 505
HP+HLHG +FF V + LV+P R+ +P G++AI
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAI 512
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 16/290 (5%)
Query: 24 RHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVT-IHWHG 82
R Y +V T ++ +T N PGP + A D +++ V N++++N T IHWHG
Sbjct: 68 REYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHG 127
Query: 83 VRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHI-LWLRATVHGAIVIL 141
+RQL + DG +TQCPI G + Y F +T Q GT +H+H L + G ++I
Sbjct: 128 IRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPLIIN 186
Query: 142 PKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSC 201
Y ++V V+ + W ++ I + G P + ++ +NG S
Sbjct: 187 GPATADY-----DEDVGVIFLQDWAHESVFEIWDTARLGAPPALENT-LMNGTNTFDCSA 240
Query: 202 SSQ-----GG--FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKT 254
S+ GG F L G Y LR+IN ++ F I H LTV+ D + P+ T
Sbjct: 241 STDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTT 300
Query: 255 DNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYS 304
D ++I GQ +V++ A+ + Y + + + AT L Y
Sbjct: 301 DTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYD 350
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 456 HPVHLHGFNFFAVGKGLGXXXXXXXXXXXXLVDPVERNTIGVPSGGWVAI 505
HP+HLHG +FF V + LV+P R+ +P G++AI
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAI 512
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 191/479 (39%), Gaps = 63/479 (13%)
Query: 44 IVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVT-IHWHGVRQLRTGWADGPAYITQCPI 102
++ VN K GPT+ A D + V V+N++K N T +HWHG+RQL + DG +T+CPI
Sbjct: 98 VMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPI 157
Query: 103 Q-SGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVL 161
G Y F T Q GT +H+H A +V + P P V L
Sbjct: 158 PPKGGRKTYKFRAT-QYGTSWYHSH---FSAQYGNGVVGTIQIDGPASLPYDIDLGVFPL 213
Query: 162 AEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRI 221
+++ + +++ +G P SD+ NG + + Q + + + GK + LRI
Sbjct: 214 MDYYYRSADELVHFTQSNGAPP--SDNVLFNGTARHPETGAGQW-YNVTLTPGKRHRLRI 270
Query: 222 INAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVA 281
IN + + + GH +TV+ D V F ++ +A GQ +V + A+ G Y
Sbjct: 271 INTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYWFN 330
Query: 282 ASPFMDAPI-AVDNVTATATLHYSGXXXXXXXXXXXXPPKNGTAIANKF-IDSLRSLNSK 339
+ F D + +N A Y G P G + N +D+L
Sbjct: 331 VT-FGDGLCGSSNNKFPAAIFRYQG-------APATLPTDQGLPVPNHMCLDNLNLTPVV 382
Query: 340 KYPAKVPQTV---DHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHF 396
A V V + L T+ +G P K NGS + NV + P + +
Sbjct: 383 TRSAPVNNFVKRPSNTLGVTLDIGGTPLFVWKV-NGSAI-----NVDWGKPILDYV---- 432
Query: 397 FNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQD-TGIIAPEN 455
+SG T +P N+ + + T LI D T I
Sbjct: 433 --MSG--NTSYP-----------VSDNIVQVDAVDQW------TYWLIENDPTNPIVSLP 471
Query: 456 HPVHLHGFNFFAVGKGLGXXXXXXXXXXXXLV---------DPVERNTIGVPSGGWVAI 505
HP+HLHG +F +G+ +PV R+ +P+GGW+ +
Sbjct: 472 HPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLL 530
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 23/232 (9%)
Query: 48 NRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHS 107
N + P P ++ E D V V V N TIHWHG+ Q T +DG + TQ I+ G +
Sbjct: 28 NGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDT 87
Query: 108 YVYNFTITGQRGTLLWHAHI-----LWLRATVHGAIVILPKRGVPYPFPKP-HKEVVVVL 161
+ Y F GT+ +H H+ + +R + G +++ PK P P K K+ +++L
Sbjct: 88 FTYKFKAE-PAGTMWYHCHVNVNEHVTMRG-MWGPLIVEPKN--PLPIEKTVTKDYILML 143
Query: 162 AEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRI 221
++W + N+ + G+ +V D +TIN + P + + V G LR+
Sbjct: 144 SDW----VSSWANKPGEGGIPGDVFDYYTINAKSFPETQ-------PIRVKKGDVIRLRL 192
Query: 222 INAALNEELFFKIAGHKLTVVEVDATYV-KPFKTDNIVIAPGQTTNVLLSAD 272
I A + GH + D + KP K D ++I PG+ +V+L+ D
Sbjct: 193 IGAG-DHVHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMD 243
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 11/238 (4%)
Query: 44 IVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVT-IHWHGVRQLRTGWADGPAYITQCPI 102
++ +N GP + A DTV V V+N++ N T IHWHG+ Q T DG +T+CPI
Sbjct: 57 VMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPI 116
Query: 103 Q-SGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVL 161
G Y + Q GT +H+H A +V + P P V +
Sbjct: 117 PPKGGQRTYRWRAR-QYGTSWYHSH---FSAQYGNGVVGTIQINGPASLPYDIDLGVFPI 172
Query: 162 AEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGF-TLPVDSGKTYMLR 220
+++ + +++ AP SD+ ING ++ + +G + + + GK + LR
Sbjct: 173 TDYYYRAADDLVH--FTQNNAPPFSDNVLINGTA--VNPNTGEGQYANVTLTPGKRHRLR 228
Query: 221 IINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKY 278
I+N + + H +TV+ D V D++ +A GQ +V++ A + Y
Sbjct: 229 ILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNY 286
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 11/238 (4%)
Query: 44 IVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVT-IHWHGVRQLRTGWADGPAYITQCPI 102
++ +N GP + A DTV V V+N++ N T IHWHG+ Q T DG +T+CPI
Sbjct: 57 VMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPI 116
Query: 103 Q-SGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVL 161
G Y + Q GT +H+H A +V + P P V +
Sbjct: 117 PPKGGQRTYRWRAR-QYGTSWYHSH---FSAQYGNGVVGTIQINGPASLPYDIDLGVFPI 172
Query: 162 AEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGF-TLPVDSGKTYMLR 220
+++ + +++ AP SD+ ING ++ + +G + + + GK + LR
Sbjct: 173 TDYYYRAADDLVH--FTQNNAPPFSDNVLINGTA--VNPNTGEGQYANVTLTPGKRHRLR 228
Query: 221 IINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKY 278
I+N + + H +TV+ D V D++ +A GQ +V++ A + Y
Sbjct: 229 ILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNY 286
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 11/238 (4%)
Query: 44 IVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVT-IHWHGVRQLRTGWADGPAYITQCPI 102
++ +N GP + A DTV V V+N++ N T IHWHG+ Q T DG +T+CPI
Sbjct: 57 VMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPI 116
Query: 103 Q-SGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVL 161
G Y + Q GT +H+H A +V + P P V +
Sbjct: 117 PPKGGQRTYRWRAR-QYGTSWYHSH---FSAQYGNGVVGTIQINGPASLPYDIDLGVFPI 172
Query: 162 AEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGF-TLPVDSGKTYMLR 220
+++ + +++ AP SD+ ING ++ + +G + + + GK + LR
Sbjct: 173 TDYYYRAADDLVH--FTQNNAPPFSDNVLINGTA--VNPNTGEGQYANVTLTPGKRHRLR 228
Query: 221 IINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKY 278
I+N + + H +TV+ D V D++ +A GQ +V++ A + Y
Sbjct: 229 ILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNY 286
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 31/251 (12%)
Query: 44 IVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQ 103
++T FPGPTL R DTV + + N + +HWHG+ + D P I
Sbjct: 37 LLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPI--SPKVDDPF----LEIP 90
Query: 104 SGHSYVYNFTITGQ-RGTLLWHAHI-----LWLRATVHGAIVILPKRGVPYPFPKPHKEV 157
G S+ Y FT+ + GT +H H+ L A + GA+V+ +
Sbjct: 91 PGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVV--------------ESS 136
Query: 158 VVVLAEWWKSDTEAVI--NQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGK 215
+ + E +++ ++ + ALQ G + +NG+ G + + TL V
Sbjct: 137 LDAIPELREAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGALRPTL-VAQKA 195
Query: 216 TYMLRIINAALNEELFFKIAGHKLTVVEVDATYV-KPFKTDNIVIAPGQTTNVLLSADKT 274
T LR++NA+ + H L ++ D ++ +P + +++APG+ VL+ K
Sbjct: 196 TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK- 254
Query: 275 SGKYLVAASPF 285
G++L+ A P+
Sbjct: 255 EGRFLLQALPY 265
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 13/127 (10%)
Query: 46 TVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSG 105
+ N + PGPTL+ARE D + + N + TIH+HGV + DG I I G
Sbjct: 58 SYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHRATM---DGTPGIGAGSIAPG 114
Query: 106 HSYVYNFTITGQRGTLLWHAHILWLRATV----HGAIVILPKRGVPYPFPKPHKEVVVVL 161
S+ Y F T GT L+H H L + +G ++ PK G P P + +V++
Sbjct: 115 QSFTYEFDAT-PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP-----PADDEMVMV 168
Query: 162 AEWWKSD 168
+ +D
Sbjct: 169 MNGYNTD 175
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 104/261 (39%), Gaps = 30/261 (11%)
Query: 31 VMKNSTKLCSSKPIV--TVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRT 88
+ +N +L K + T N P P + E D + + V N +K TIHWHGV
Sbjct: 57 IKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPV--P 114
Query: 89 GWADGPAYITQCPIQSGHSYVYNFTI-TGQRGTLLWHAHILWLRAT-----VHGAIVILP 142
DG + PI +G +Y F I GT +H H + + + GA VI
Sbjct: 115 PDQDGSPH---DPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKA 171
Query: 143 KRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCS 202
K+ KE +++++ + D A I PN + + +NG+ G +
Sbjct: 172 KKDALSHL----KEKDLMISD-LRLDENAQI---------PNNNLNDWLNGREGEFVLIN 217
Query: 203 SQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYV-KPFKTDNIVIAP 261
Q F + +RI NA L +I G K +V D + K + + ++P
Sbjct: 218 GQ--FKPKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSP 275
Query: 262 GQTTNVLLSADKTSGKYLVAA 282
VL+ A K L +A
Sbjct: 276 ASRVEVLIDAPKDGNFKLESA 296
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 34/245 (13%)
Query: 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADG--PAYITQCPIQSGHSYVYN 111
PT+ R V + + N + +HWHG W + P++ I G SY Y+
Sbjct: 38 PTIILRRGQRVDMTLKNKLTEPTIVHWHG---FDVNWHNDAHPSFA----ITPGESYNYS 90
Query: 112 FTITGQRGTLLWHAHILWLRATV----HGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKS 167
F + + GT L+H H L A +VI+ G F ++ +V+++
Sbjct: 91 FDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSDLGFKYGVNDLPLVISDRRFI 150
Query: 168 DTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALN 227
V N +A + ++ +NG + F L SG +Y LR++N + N
Sbjct: 151 GGAPVYNPTPMEMIAGFLGNAVLVNGVKDAV--------FKL---SGGSYRLRLVNGS-N 198
Query: 228 EELFFKIAGHK------LTVVEVDATYV-KPFKTDNIVIAPGQTTNVLLSADKTSGKYLV 280
L+ K + ++ VD ++ +P + + +AP + V++ + G YL+
Sbjct: 199 ARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELGE--GVYLL 256
Query: 281 AASPF 285
+PF
Sbjct: 257 KNTPF 261
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Query: 24 RHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGV 83
R YK M + + ++ + GP LY DT+L+ N I+ HG+
Sbjct: 421 RKYKKVRFMAYTDETFKTREAIQHESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGI 480
Query: 84 RQLRTGWA----DGPAYITQCPIQSGHSYVYNFTITGQRG 119
+R ++ G ++ PI G + Y +T+T + G
Sbjct: 481 TDVRPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDG 520
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 53 GPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQS-------- 104
GPT+ A +DTV++ + N + V++H GV + ++G Y Q +
Sbjct: 73 GPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREKEDDKVFP 130
Query: 105 GHSYVYNFTITGQRGTL-----------LWHAHILW-LRATVHGAIVILPKRGVPYPFPK 152
G S+ Y + + + G + L H ++ L + + GA+++ + + +
Sbjct: 131 GGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQ 190
Query: 153 PHKEVVVVLAEW-----WKSDTEAVINQALQSGLAPNVSDSHTING 193
+ +++ A + W S+T+ + Q + A HT+NG
Sbjct: 191 TLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNG 236
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Query: 24 RHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGV 83
R YK M + + ++ + GP LY DT+L+ N I+ HG+
Sbjct: 422 RKYKKVRFMAYTDETFKTREAIQHESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGI 481
Query: 84 RQLRTGWA----DGPAYITQCPIQSGHSYVYNFTITGQRG 119
+R ++ G ++ PI G + Y +T+T + G
Sbjct: 482 TDVRPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDG 521
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 53 GPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQS-------- 104
GPT+ A +DTV++ + N + V++H GV + ++G Y Q +
Sbjct: 74 GPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREKEDDKVFP 131
Query: 105 GHSYVYNFTITGQRGTL-----------LWHAHILW-LRATVHGAIVILPKRGVPYPFPK 152
G S+ Y + + + G + L H ++ L + + GA+++ + + +
Sbjct: 132 GGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQ 191
Query: 153 PHKEVVVVLAEW-----WKSDTEAVINQALQSGLAPNVSDSHTING 193
+ +++ A + W S+T+ + Q + A HT+NG
Sbjct: 192 TLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNG 237
>pdb|2BO0|A Chain A, Crystal Structure Of The C130a Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWHA----HILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++HA + W + + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHAAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|2XX0|A Chain A, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
pdb|2XX0|B Chain B, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + ++ +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|2XX1|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|B Chain B, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|D Chain D, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|E Chain E, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|F Chain F, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + ++ +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|2XXG|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
pdb|2XXG|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
Length = 336
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + ++ +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|1GS8|A Chain A, Crystal Structure Of Mutant D92n Alcaligenes Xylosoxidans
Nitrite Reductase
Length = 336
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + +++HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVNFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|1WA1|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
pdb|1WA2|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase With Nitrite Bound
Length = 336
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|1OE2|A Chain A, Atomic Resolution Structure Of D92e Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVEFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|1GS7|A Chain A, Crystal Structure Of H254f Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|2XXF|A Chain A, Cu Metallated H254f Mutant Of Nitrite Reductase
pdb|2XXF|B Chain B, Cu Metallated H254f Mutant Of Nitrite Reductase
Length = 336
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|2BP0|A Chain A, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPEGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|2BP0|B Chain B, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPEGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|2VN3|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 337
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 57 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 109
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 110 NPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYD 168
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 169 RAYTIGEF 176
>pdb|2XWZ|A Chain A, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|B Chain B, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|C Chain C, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|D Chain D, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|E Chain E, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XWZ|F Chain F, Structure Of The Recombinant Native Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|1HAU|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At High
Ph And In Copper Free Form At 1.9 A Resolution
pdb|1HAW|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At High
Ph And In Copper Free Form At 1.9a Resolution
pdb|2VM3|A Chain A, Structure Of Alcaligenes Xylosoxidans In Space Group R3 -
1 Of 2
pdb|2VM4|A Chain A, Structure Of Alcaligenes Xylosoxidans Nitrite Reductase In
Space Group R3 - 2 Of 2
pdb|2VW4|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 2 Of 3
pdb|2VW4|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 2 Of 3
pdb|2VW6|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 3 Of 3
pdb|2VW6|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 3 Of 3
pdb|2VW7|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans - 1 Of 3
pdb|2VW7|B Chain B, Nitrite Reductase From Alcaligenes Xylosoxidans - 1 Of 3
pdb|2ZON|A Chain A, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
pdb|2ZON|B Chain B, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
pdb|2ZON|C Chain C, Crystal Structure Of Electron Transfer Complex Of Nitrite
Reductase With Cytochrome C
Length = 336
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|1BQ5|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans Gifu 1051
Length = 342
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 62 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 114
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 115 NPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYD 173
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 174 RAYTIGEF 181
>pdb|1OE1|A Chain A, Atomic Resolution Structure Of The Wildtype Native Nitrite
Reductase From Alcaligenes Xylosoxidans
pdb|1OE3|A Chain A, Atomic Resolution Structure Of 'half Apo' Nir
Length = 336
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|2JFC|A Chain A, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|B Chain B, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|C Chain C, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|D Chain D, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|E Chain E, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|F Chain F, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
Length = 335
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 55 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 107
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P KP H +
Sbjct: 108 NPGEQATLRFK-ADRSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPQGKPLHYD 166
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 167 RAYTIGEF 174
>pdb|1GS6|X Chain X, Crystal Structure Of M144a Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGASGTLMVLPRDGLKDPQGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|1WA0|X Chain X, Crystal Structure Of W138h Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 22/131 (16%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWHA--------HILWLRATVHGAIVILPKRGVPYPFPKP- 153
G F + GT ++H H++ + + G +++LP+ G+ P KP
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHCAPEGMVPHHVV---SGMSGTLMVLPRDGLKDPQGKPL 164
Query: 154 HKEVVVVLAEW 164
H + + E+
Sbjct: 165 HYDRAYTIGEF 175
>pdb|2VMJ|A Chain A, Type 1 Copper-Binding Loop Of Nitrite Reductase Mutant:
130- Capegmvpwhvvsgm-144 To 130-Ctphpfm-136
Length = 329
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 14/123 (11%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 57 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 109
Query: 103 QSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKP-HKEVVVVL 161
G F + GT ++H + G +++LP+ G+ P KP H + +
Sbjct: 110 NPGEQATLRFK-ADRSGTFVYHCTP---HPFMSGTLMVLPRDGLKDPQGKPLHYDRAYTI 165
Query: 162 AEW 164
E+
Sbjct: 166 GEF 168
>pdb|2BP8|A Chain A, M168q Structure Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGQSGTLMVLPRDGLKDPEGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|2BP8|B Chain B, M168q Structure Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + G +++LP+ G+ P KP H +
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGQSGTLMVLPRDGLKDPEGKPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 45 VTVNRKFP--GPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPI 102
+T+N + P GP A D V + ++ H +Y T H HG R WAD I P
Sbjct: 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTGPD 252
Query: 103 QSGHSYVYNFTITG 116
S V + ITG
Sbjct: 253 DP--SRVIDNKITG 264
>pdb|1NDT|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans
Length = 336
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 16/128 (12%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNV--TIHWHGVRQLRTGWADGPAYITQCPI 102
+T N PGPTL E D V + +VN + + +HG TG A G A +T +
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA----TG-ALGGAKLTN--V 108
Query: 103 QSGHSYVYNFTITGQRGTLLWH----AHILW-LRATVHGAIVILPKRGVPYPFPKP-HKE 156
G F + GT ++H + W + + + G +++LP+ G+ P P H +
Sbjct: 109 NPGEQATLRFKAD-RSGTFVYHCAPSGMVPWHVVSGMSGTLMVLPRDGLKDPAGAPLHYD 167
Query: 157 VVVVLAEW 164
+ E+
Sbjct: 168 RAYTIGEF 175
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 45 VTVNRKFP--GPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPI 102
+T+N + P GP A D V + ++ H +Y T H HG R WAD I P
Sbjct: 160 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTGPD 214
Query: 103 QSGHSYVYNFTITG 116
S V + ITG
Sbjct: 215 DP--SRVIDNKITG 226
>pdb|1WAE|A Chain A, Crystal Structure Of H129v Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 18/129 (13%)
Query: 45 VTVNRKFPGPTLYAREHDTVLVKVV----NHVKYNVTIHWH----GVRQLRTGWADGPAY 96
+T N PGPTL E D V + +V N + +NV H G +L T G
Sbjct: 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGGAKL-TNVNPGEQA 114
Query: 97 ITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPKP-HK 155
+ ++VY + G + WH + + + G +++LP+ G+ P KP H
Sbjct: 115 TLRFKADRSGTFVY---VCAPEGMVPWH-----VVSGMSGTLMVLPRDGLKDPQGKPLHY 166
Query: 156 EVVVVLAEW 164
+ + E+
Sbjct: 167 DRAYTIGEF 175
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 45 VTVNRKFP--GPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPI 102
+T+N + P GP A D V + ++ H +Y T H HG R WAD I P
Sbjct: 161 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTGPD 215
Query: 103 QSGHSYVYNFTITG 116
S V + ITG
Sbjct: 216 DP--SRVIDNKITG 227
>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB6|B Chain B, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
Length = 292
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 345 VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFT 404
V ++++ N L V L V P K NGS VV S P +A A F + G F+
Sbjct: 136 VRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFS 195
Query: 405 T 405
+
Sbjct: 196 S 196
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 45 VTVNRKFP--GPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPI 102
+T+N + P GP A D V + ++ H +Y T H HG R WAD I P
Sbjct: 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHR-----WADNRTGILTGPD 211
Query: 103 QSGHSYVYNFTITG 116
S V + ITG
Sbjct: 212 DP--SRVIDNKITG 223
>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|B Chain B, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|C Chain C, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|D Chain D, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
Length = 292
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 345 VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFT 404
V ++++ N L V L V P K NGS VV S P +A A F + G F+
Sbjct: 136 VRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFS 195
Query: 405 T 405
+
Sbjct: 196 S 196
>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase 1 (11b-Hsd1) In Complex With
4,4-Disubstituted Cyclohexylbenzamide Inhibitor
pdb|3PDJ|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase 1 (11b-Hsd1) In Complex With
4,4-Disubstituted Cyclohexylbenzamide Inhibitor
Length = 273
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 345 VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFT 404
V ++++ N L V L V P K NGS VV S P +A A F + G F+
Sbjct: 117 VRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFS 176
Query: 405 T 405
+
Sbjct: 177 S 177
>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|B Chain B, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|C Chain C, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|D Chain D, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU9|A Chain A, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|B Chain B, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|C Chain C, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|D Chain D, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|3BZU|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3CZR|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With
Arylsulfonylpiperazine Inhibitor
pdb|3CZR|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With
Arylsulfonylpiperazine Inhibitor
pdb|3D3E|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D4N|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3FRJ|A Chain A, Crystal Structure Of 11b-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Piperidyl Benzamide Inhibitor
pdb|3FRJ|B Chain B, Crystal Structure Of 11b-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Piperidyl Benzamide Inhibitor
pdb|3HFG|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3FCO|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Benzamide Inhibitor
pdb|3FCO|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Benzamide Inhibitor
pdb|3H6K|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3OQ1|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|C Chain C, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|D Chain D, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3QQP|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|C Chain C, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|D Chain D, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
Length = 286
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 345 VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFT 404
V ++++ N L V L V P K NGS VV S P +A A F + G F+
Sbjct: 130 VRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFS 189
Query: 405 T 405
+
Sbjct: 190 S 190
>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|B Chain B, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|C Chain C, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|D Chain D, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|3BYZ|A Chain A, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|B Chain B, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|C Chain C, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|D Chain D, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3EY4|A Chain A, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|B Chain B, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|C Chain C, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|D Chain D, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
Length = 275
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 345 VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFT 404
V ++++ N L V L V P K NGS VV S P +A A F + G F+
Sbjct: 119 VRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFS 178
Query: 405 T 405
+
Sbjct: 179 S 179
>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In
Complex With An Orally Bioavailable Acidic Inhibitor
Azd4017.
pdb|4HFR|B Chain B, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In
Complex With An Orally Bioavailable Acidic Inhibitor
Azd4017
Length = 272
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 345 VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFT 404
V ++++ N L V L V P K NGS VV S P +A A F + G F+
Sbjct: 116 VRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFS 175
Query: 405 T 405
+
Sbjct: 176 S 176
>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Sulfone Inhibitor
Length = 275
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 345 VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFT 404
V ++++ N L V L V P K NGS VV S P +A A F + G F+
Sbjct: 126 VRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFS 185
Query: 405 T 405
+
Sbjct: 186 S 186
>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|B Chain B, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|C Chain C, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|D Chain D, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
Length = 272
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 345 VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFT 404
V ++++ N L V L V P K NGS VV S P +A A F + G F+
Sbjct: 116 VRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFS 175
Query: 405 T 405
+
Sbjct: 176 S 176
>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|B Chain B, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|C Chain C, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|D Chain D, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|E Chain E, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|F Chain F, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|G Chain G, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|H Chain H, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
Length = 264
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 345 VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFT 404
V ++++ N L V L V P K NGS VV S P +A A F + G F+
Sbjct: 111 VRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFS 170
Query: 405 T 405
+
Sbjct: 171 S 171
>pdb|4AKO|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear
Site: E498l Mutant
Length = 507
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 112/265 (42%), Gaps = 31/265 (11%)
Query: 48 NRKFPGPTLYAREHDTVLVKVVNH------VKYNVTIHWHGVRQLRT----------GWA 91
N FPGPT+ + ++ V VK +N+ + + TIH +++T +
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSEEPEVKTVVHLHGGVTPDDS 111
Query: 92 DG--PAYITQCPIQSGHSY---VYNFTITGQRGTLLW-HAHILWL-RATVH----GAIVI 140
DG A+ ++ Q+G + VY++ QRG +LW H H + L R V+ GA +I
Sbjct: 112 DGYPEAWFSKDFEQTGPYFKREVYHYP-NQQRGAILWYHDHAMALTRLNVYAGLVGAYII 170
Query: 141 LPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISS 200
+ P +V +++ + ++ ++ + +P++ + + G
Sbjct: 171 HDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETIL 230
Query: 201 CSSQGGFTLPVDSGKTYMLRIINAALNE--ELFFKIAGHKLTVVEVDATYVKPFKTDNIV 258
+ + L V+ K Y R+INA+ L G + + + K ++
Sbjct: 231 VNGKVWPYLEVEPRK-YRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFS 289
Query: 259 IAPGQTTNVLLSADKTSGKYLVAAS 283
+AP + ++++ G+ ++ A+
Sbjct: 290 LAPAERYDIIIDFTAYEGESIILAN 314
>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|B Chain B, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|C Chain C, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|D Chain D, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
Length = 283
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 345 VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFT 404
V ++++ N L V L V P K NGS VV S P +A A F + G F+
Sbjct: 133 VRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFS 192
Query: 405 T 405
+
Sbjct: 193 S 193
>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|B Chain B, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|D Chain D, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|E Chain E, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3TFQ|A Chain A, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|B Chain B, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|D Chain D, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|E Chain E, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
Length = 286
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 345 VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFT 404
V ++++ N L V L V P K NGS VV S P +A A F + G F+
Sbjct: 130 VRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFS 189
Query: 405 T 405
+
Sbjct: 190 S 190
>pdb|1SDD|A Chain A, Crystal Structure Of Bovine Factor Vai
Length = 306
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 53 GPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQ-CPIQS------- 104
GPTLYA D + V N ++IH G++ + +++G +Y P++
Sbjct: 59 GPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIK--YSKFSEGASYSDHTLPMEKMDDAVAP 116
Query: 105 GHSYVYNFTITGQRG 119
G Y Y + I+ G
Sbjct: 117 GQEYTYEWIISEHSG 131
>pdb|1HWM|A Chain A, Ebulin,Orthorhombic Crystal Form Model
pdb|1HWN|A Chain A, Ebulin Complexed With Galactose, Trigonal Crystal Form
pdb|1HWO|A Chain A, Ebulin Complexed With Lactose, Trigonal Crystal Form
pdb|1HWP|A Chain A, Ebulin Complexed With Pteroic Acid, Trigonal Crystal Form
Length = 254
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 407 FPGNPPHTYNFTGTPKNLQTSNGTK 431
F G HT +FTG NL+T+ GT+
Sbjct: 102 FLGTTQHTLSFTGNYDNLETAAGTR 126
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 48 NRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVR 84
N GP + + V V + N + T+HWHG+
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE 78
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,757,435
Number of Sequences: 62578
Number of extensions: 648607
Number of successful extensions: 1452
Number of sequences better than 100.0: 98
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1305
Number of HSP's gapped (non-prelim): 147
length of query: 535
length of database: 14,973,337
effective HSP length: 103
effective length of query: 432
effective length of database: 8,527,803
effective search space: 3684010896
effective search space used: 3684010896
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)