Query 009392
Match_columns 535
No_of_seqs 229 out of 1889
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 04:10:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009392.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009392hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 3.9E-98 1E-102 808.6 53.7 487 21-527 1-521 (552)
2 3sqr_A Laccase; multicopper ox 100.0 9E-97 3E-101 791.4 54.3 453 21-528 65-541 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 1.6E-92 5.3E-97 750.4 51.5 448 23-527 3-467 (499)
4 3t6v_A Laccase; beta barrel, o 100.0 2.1E-92 7.2E-97 749.4 51.4 447 23-527 4-467 (495)
5 1v10_A Laccase; multicopper bl 100.0 1.2E-92 4E-97 759.5 48.1 469 1-528 1-488 (521)
6 1zpu_A Iron transport multicop 100.0 1.4E-91 4.9E-96 751.9 52.3 450 22-528 1-478 (534)
7 2q9o_A Laccase-1; multicopper 100.0 5.2E-89 1.8E-93 736.5 52.3 460 20-528 30-518 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 2.8E-88 9.6E-93 723.1 47.7 443 24-528 5-467 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 8.4E-81 2.9E-85 655.5 37.4 392 21-527 14-436 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 1.1E-80 3.7E-85 655.4 30.2 396 22-529 17-439 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 1.1E-78 3.6E-83 650.8 33.3 410 22-528 35-472 (534)
12 2wsd_A Spore coat protein A; o 100.0 8.3E-78 2.8E-82 643.8 37.6 423 23-531 25-510 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 3.7E-76 1.3E-80 620.8 38.3 406 19-528 46-478 (481)
14 3aw5_A Multicopper oxidase; be 100.0 3.2E-76 1.1E-80 620.4 32.8 384 23-527 20-445 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 4.6E-75 1.6E-79 639.7 36.8 455 21-529 30-589 (612)
16 3od3_A Blue copper oxidase CUE 100.0 9.2E-74 3.2E-78 602.2 33.8 417 21-527 15-486 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 4.5E-72 1.5E-76 603.7 39.9 431 21-528 30-588 (612)
18 3g5w_A Multicopper oxidase typ 100.0 1.2E-54 4.1E-59 436.4 31.8 271 22-307 1-278 (318)
19 2zwn_A Two-domain type laccase 100.0 1.6E-53 5.4E-58 432.9 34.7 271 22-307 2-279 (339)
20 2j5w_A Ceruloplasmin, ferroxid 100.0 1.3E-52 4.4E-57 482.1 30.3 442 14-520 12-542 (1065)
21 1kbv_A ANIA, major outer membr 100.0 1.2E-49 4.1E-54 402.4 29.7 262 20-308 35-310 (327)
22 2r7e_A Coagulation factor VIII 100.0 1.5E-51 5E-56 455.3 15.7 237 27-285 50-314 (742)
23 3gdc_A Multicopper oxidase; be 100.0 2.1E-48 7.2E-53 386.3 31.7 235 21-284 32-272 (288)
24 2dv6_A Nitrite reductase; elec 100.0 3.3E-47 1.1E-51 402.2 24.9 376 21-527 26-429 (447)
25 2zoo_A Probable nitrite reduct 100.0 2.7E-45 9.3E-50 386.7 30.2 263 19-308 24-300 (442)
26 3kw8_A Laccase, putative coppe 100.0 1.8E-45 6.2E-50 363.0 24.4 222 19-284 3-249 (276)
27 1mzy_A Copper-containing nitri 100.0 1.2E-44 4.2E-49 367.4 29.6 267 20-308 29-321 (333)
28 3tas_A Small laccase, multi-co 100.0 3.4E-45 1.2E-49 367.3 23.1 224 17-284 7-255 (313)
29 3t9w_A Small laccase, multi-co 100.0 9.2E-45 3.1E-49 361.4 22.7 224 18-284 24-271 (299)
30 2bw4_A Copper-containing nitri 100.0 1.4E-43 4.9E-48 360.7 28.6 268 19-308 34-327 (340)
31 1oe1_A Dissimilatory copper-co 100.0 2E-43 6.8E-48 359.1 29.1 267 20-308 29-321 (336)
32 2j5w_A Ceruloplasmin, ferroxid 100.0 6.9E-44 2.3E-48 409.7 20.6 373 40-528 616-1055(1065)
33 1sdd_B Coagulation factor V; c 100.0 3.8E-41 1.3E-45 370.6 26.5 248 20-284 3-311 (647)
34 1sdd_A Coagulation factor V; c 100.0 2.2E-43 7.4E-48 353.3 3.9 216 42-285 49-285 (306)
35 3cg8_A Laccase; oxidoreductase 100.0 2.2E-40 7.5E-45 335.9 25.5 236 21-306 46-307 (343)
36 2dv6_A Nitrite reductase; elec 100.0 1.2E-39 4E-44 344.4 30.9 260 21-308 161-436 (447)
37 2r7e_B Coagulation factor VIII 100.0 2.5E-41 8.4E-46 374.2 10.6 248 20-284 130-440 (770)
38 2r7e_A Coagulation factor VIII 100.0 8.9E-38 3.1E-42 345.3 6.2 216 50-286 448-697 (742)
39 2zwn_A Two-domain type laccase 99.9 2.7E-26 9.2E-31 232.7 14.1 226 186-521 23-255 (339)
40 3gdc_A Multicopper oxidase; be 99.9 6.6E-25 2.3E-29 217.4 16.3 225 186-528 54-285 (288)
41 3g5w_A Multicopper oxidase typ 99.9 3.7E-25 1.3E-29 221.9 13.1 230 187-520 23-253 (318)
42 3cg8_A Laccase; oxidoreductase 99.9 1.6E-24 5.4E-29 219.4 14.2 205 206-529 76-304 (343)
43 3t9w_A Small laccase, multi-co 99.9 1.4E-22 4.8E-27 201.4 17.0 206 206-530 57-286 (299)
44 3kw8_A Laccase, putative coppe 99.9 1.8E-22 6.1E-27 198.7 15.0 207 206-531 35-265 (276)
45 3tas_A Small laccase, multi-co 99.9 1.3E-21 4.5E-26 195.9 16.6 206 206-530 41-270 (313)
46 1sdd_A Coagulation factor V; c 99.8 1.8E-20 6.1E-25 187.1 6.3 227 188-527 51-296 (306)
47 1kbv_A ANIA, major outer membr 99.8 2.5E-19 8.7E-24 180.5 14.4 230 187-520 59-289 (327)
48 2uxt_A Protein SUFI, SUFI; oxi 99.8 4.6E-17 1.6E-21 170.9 24.0 222 23-284 152-425 (451)
49 1sdd_B Coagulation factor V; c 99.8 2.6E-18 8.9E-23 188.9 15.1 237 207-529 69-325 (647)
50 2xu9_A Laccase; oxidoreductase 99.7 7.3E-17 2.5E-21 169.1 22.8 230 23-284 146-424 (439)
51 2bw4_A Copper-containing nitri 99.7 1.6E-17 5.6E-22 168.4 16.6 252 186-528 59-321 (340)
52 2r7e_B Coagulation factor VIII 99.7 1.5E-18 5E-23 192.3 6.4 231 206-529 198-454 (770)
53 1mzy_A Copper-containing nitri 99.7 2.8E-16 9.6E-21 158.8 16.0 82 432-529 226-316 (333)
54 2zoo_A Probable nitrite reduct 99.7 3.1E-16 1.1E-20 164.8 16.4 230 187-520 49-279 (442)
55 1v10_A Laccase; multicopper bl 99.7 4.4E-15 1.5E-19 158.7 23.0 221 42-284 191-475 (521)
56 1hfu_A Laccase 1; oxidoreducta 99.7 6.4E-15 2.2E-19 156.8 23.6 256 25-284 143-454 (503)
57 1oe1_A Dissimilatory copper-co 99.6 6.1E-15 2.1E-19 149.3 17.9 230 187-527 54-314 (336)
58 3zx1_A Oxidoreductase, putativ 99.6 2.6E-14 9E-19 150.3 23.2 237 24-284 181-465 (481)
59 3t6v_A Laccase; beta barrel, o 99.6 7.4E-14 2.5E-18 147.7 23.2 236 41-284 167-455 (495)
60 1zpu_A Iron transport multicop 99.6 2.6E-13 8.8E-18 145.3 26.3 223 42-284 167-465 (534)
61 3pxl_A Laccase; 4-copper prote 99.6 2.1E-13 7.3E-18 144.2 23.5 236 41-284 165-455 (499)
62 1aoz_A Ascorbate oxidase; oxid 99.6 1.5E-13 5.1E-18 148.1 22.5 211 55-284 205-509 (552)
63 3cvb_A Plastocyanin; cupredoxi 99.6 1.6E-15 5.5E-20 126.4 4.4 90 49-142 14-105 (105)
64 3od3_A Blue copper oxidase CUE 99.5 2.7E-13 9.2E-18 142.6 21.8 250 24-284 151-474 (488)
65 2q9o_A Laccase-1; multicopper 99.5 1.1E-12 3.7E-17 141.3 25.4 240 42-284 195-505 (559)
66 3aw5_A Multicopper oxidase; be 99.5 4.2E-13 1.4E-17 140.6 19.8 212 39-284 166-433 (448)
67 2g23_A PHS, phenoxazinone synt 99.5 1.6E-12 5.4E-17 140.3 22.7 231 41-284 253-575 (612)
68 2wsd_A Spore coat protein A; o 99.5 1.2E-12 4.1E-17 139.7 18.1 217 41-284 229-494 (513)
69 3abg_A Bilirubin oxidase; clea 99.5 9.9E-13 3.4E-17 140.5 17.1 214 42-284 201-459 (534)
70 1iby_A Nitrosocyanin; RED copp 99.4 2.3E-13 7.9E-18 114.7 8.1 105 24-142 2-112 (112)
71 2cal_A Rusticyanin; iron respi 99.4 6.8E-13 2.3E-17 117.9 10.9 99 38-141 46-154 (154)
72 3sqr_A Laccase; multicopper ox 99.3 2.1E-10 7.3E-15 122.9 25.1 234 42-284 225-528 (580)
73 1fwx_A Nitrous oxide reductase 99.3 6.3E-12 2.2E-16 133.6 9.2 96 38-144 497-594 (595)
74 2ov0_A Amicyanin; beta-sandwic 99.2 9.1E-11 3.1E-15 97.4 10.2 79 48-141 27-105 (105)
75 3gyr_A PHS, phenoxazinone synt 99.2 7E-10 2.4E-14 121.2 19.7 232 40-284 252-575 (612)
76 2gim_A Plastocyanin; beta shee 98.9 2.3E-09 7.9E-14 89.0 9.0 83 54-142 20-106 (106)
77 2aan_A Auracyanin A; cupredoxi 98.9 9.9E-09 3.4E-13 89.6 11.5 91 50-141 31-139 (139)
78 1qhq_A Protein (auracyanin); e 98.7 8.5E-08 2.9E-12 83.7 12.2 92 50-142 29-140 (140)
79 4hci_A Cupredoxin 1; structura 98.7 3.4E-08 1.2E-12 80.9 8.8 79 48-141 22-100 (100)
80 3c75_A Amicyanin; copper prote 98.6 7.1E-08 2.4E-12 83.2 8.6 79 48-141 54-132 (132)
81 2plt_A Plastocyanin; electron 98.6 1.1E-07 3.6E-12 77.5 8.3 80 54-141 18-98 (98)
82 1pcs_A Plastocyanin; electron 98.5 2.4E-07 8.1E-12 75.4 8.1 80 54-141 19-98 (98)
83 1bxv_A Plastocyanin; copper pr 98.5 2.7E-07 9.4E-12 73.9 8.2 73 54-141 19-91 (91)
84 3erx_A Pseudoazurin; copper pr 98.5 4.7E-07 1.6E-11 76.7 8.9 75 54-143 21-95 (123)
85 3tu6_A Pseudoazurin (blue copp 98.5 3.5E-07 1.2E-11 77.9 8.0 76 54-144 23-98 (127)
86 1kdj_A Plastocyanin; electron 98.4 6.1E-07 2.1E-11 73.6 8.6 77 54-141 17-102 (102)
87 3cvb_A Plastocyanin; cupredoxi 98.4 1.3E-07 4.3E-12 78.1 3.8 78 432-528 20-102 (105)
88 1b3i_A PETE protein, protein ( 98.4 7.5E-07 2.6E-11 72.3 8.3 77 54-141 19-97 (97)
89 3ef4_A Pseudoazurin, blue copp 98.4 1.3E-06 4.4E-11 73.9 9.2 75 54-143 22-96 (124)
90 2aan_A Auracyanin A; cupredoxi 98.4 1.5E-07 5.1E-12 82.0 3.4 86 432-527 36-136 (139)
91 1plc_A Plastocyanin; electron 98.4 1.6E-06 5.6E-11 70.5 9.2 77 54-141 17-99 (99)
92 1byp_A Protein (plastocyanin); 98.4 1.8E-06 6E-11 70.3 9.3 77 54-141 17-99 (99)
93 1paz_A Pseudoazurin precursor; 98.2 4.6E-06 1.6E-10 70.7 9.3 75 54-143 21-95 (123)
94 1cuo_A Protein (azurin ISO-2); 98.2 3.7E-06 1.3E-10 71.8 8.2 93 50-142 14-129 (129)
95 1id2_A Amicyanin; beta barrel, 98.2 8.2E-06 2.8E-10 67.3 10.1 78 49-141 29-106 (106)
96 1pmy_A Pseudoazurin; electron 98.2 5E-06 1.7E-10 70.4 8.3 76 54-144 21-96 (123)
97 1iuz_A Plastocyanin; electron 98.2 8.7E-06 3E-10 66.1 9.4 77 54-141 18-98 (98)
98 3ay2_A Lipid modified azurin p 98.1 1.1E-05 3.8E-10 71.7 10.3 92 50-142 54-167 (167)
99 2ccw_A Azurin II, AZN-2; elect 98.0 5.2E-05 1.8E-09 64.6 11.7 92 50-142 14-129 (129)
100 3sbq_A Nitrous-oxide reductase 98.0 1.9E-05 6.5E-10 82.4 10.3 96 37-143 539-638 (638)
101 2iaa_C Azurin; quinoprotein, t 98.0 4.3E-05 1.5E-09 65.0 10.4 92 50-142 13-128 (128)
102 2ux6_A Pseudoazurin; type-1 co 97.9 3.4E-05 1.1E-09 65.2 9.0 73 54-143 21-93 (122)
103 1nwp_A Azurin; electron transp 97.9 5.7E-05 1.9E-09 64.2 10.3 91 50-141 14-128 (128)
104 2gim_A Plastocyanin; beta shee 97.8 1E-05 3.4E-10 66.7 3.9 77 432-527 21-102 (106)
105 1iby_A Nitrosocyanin; RED copp 97.6 0.00026 8.9E-09 58.7 9.0 61 207-285 38-98 (112)
106 1bxv_A Plastocyanin; copper pr 97.5 0.00011 3.9E-09 58.3 5.5 65 432-527 20-88 (91)
107 2plt_A Plastocyanin; electron 97.5 0.00014 4.9E-09 58.7 5.5 73 432-527 19-95 (98)
108 1pcs_A Plastocyanin; electron 97.5 5.7E-05 2E-09 61.1 3.1 71 432-527 20-95 (98)
109 1qhq_A Protein (auracyanin); e 97.5 2.1E-05 7E-10 68.4 0.4 83 432-521 34-124 (140)
110 1b3i_A PETE protein, protein ( 97.2 0.00017 5.8E-09 58.1 3.3 71 432-527 20-94 (97)
111 3fsa_A Azurin; copper, cupredo 97.1 0.0032 1.1E-07 52.7 9.9 89 50-141 14-125 (125)
112 2cal_A Rusticyanin; iron respi 97.1 0.00052 1.8E-08 60.4 5.0 85 187-284 51-139 (154)
113 4hci_A Cupredoxin 1; structura 97.0 0.0027 9.3E-08 51.2 8.3 61 207-285 28-88 (100)
114 1byp_A Protein (plastocyanin); 96.8 0.00074 2.5E-08 54.5 3.3 75 432-527 18-96 (99)
115 1kdj_A Plastocyanin; electron 96.5 0.0029 9.9E-08 51.2 5.3 77 432-527 18-99 (102)
116 1fwx_A Nitrous oxide reductase 96.5 0.0037 1.3E-07 66.6 7.2 71 431-529 513-590 (595)
117 2cua_A Protein (CUA); CUA cent 96.5 0.008 2.7E-07 51.4 7.8 74 54-142 60-135 (135)
118 2ov0_A Amicyanin; beta-sandwic 96.3 0.0035 1.2E-07 51.2 4.4 67 432-527 34-102 (105)
119 3s8f_B Cytochrome C oxidase su 96.1 0.019 6.4E-07 50.8 8.5 74 54-142 93-168 (168)
120 3ay2_A Lipid modified azurin p 96.1 0.0063 2.2E-07 53.9 5.4 73 207-283 58-151 (167)
121 1nwp_A Azurin; electron transp 96.0 0.012 4E-07 49.8 6.5 77 206-283 17-113 (128)
122 3fsa_A Azurin; copper, cupredo 96.0 0.0076 2.6E-07 50.4 5.0 78 206-283 17-113 (125)
123 2iaa_C Azurin; quinoprotein, t 96.0 0.014 4.7E-07 49.4 6.7 77 206-283 16-112 (128)
124 1cuo_A Protein (azurin ISO-2); 95.9 0.0073 2.5E-07 51.2 4.5 75 206-283 17-113 (129)
125 2ccw_A Azurin II, AZN-2; elect 95.9 0.0052 1.8E-07 52.1 3.6 78 206-283 17-113 (129)
126 1plc_A Plastocyanin; electron 95.7 0.0078 2.7E-07 48.3 4.0 75 432-527 18-96 (99)
127 1iuz_A Plastocyanin; electron 94.6 0.076 2.6E-06 42.3 6.6 69 206-284 17-85 (98)
128 1id2_A Amicyanin; beta barrel, 93.8 0.061 2.1E-06 43.7 4.5 67 432-527 35-103 (106)
129 3c75_A Amicyanin; copper prote 93.2 0.082 2.8E-06 44.8 4.5 67 432-527 61-129 (132)
130 3sbq_A Nitrous-oxide reductase 93.1 0.38 1.3E-05 50.5 10.0 64 206-286 557-622 (638)
131 2cua_A Protein (CUA); CUA cent 92.9 0.45 1.5E-05 40.4 8.7 61 207-286 60-120 (135)
132 3erx_A Pseudoazurin; copper pr 92.2 0.073 2.5E-06 44.5 2.8 61 207-285 21-81 (123)
133 3s8f_B Cytochrome C oxidase su 91.3 0.87 3E-05 40.1 8.9 62 207-287 93-154 (168)
134 2ux6_A Pseudoazurin; type-1 co 88.6 0.41 1.4E-05 39.8 4.3 60 207-284 21-80 (122)
135 1paz_A Pseudoazurin precursor; 88.2 0.35 1.2E-05 40.3 3.6 60 207-284 21-80 (123)
136 3tu6_A Pseudoazurin (blue copp 87.5 0.39 1.4E-05 40.2 3.5 30 498-529 61-94 (127)
137 1pmy_A Pseudoazurin; electron 87.4 0.34 1.2E-05 40.4 3.1 60 207-284 21-80 (123)
138 3ef4_A Pseudoazurin, blue copp 87.3 0.72 2.5E-05 38.4 5.0 66 432-528 23-92 (124)
139 3isy_A Bsupi, intracellular pr 87.0 5.2 0.00018 32.9 9.9 72 213-285 16-102 (120)
140 1cyx_A CYOA; electron transpor 80.5 7.7 0.00026 35.0 9.0 62 207-287 41-102 (205)
141 3isy_A Bsupi, intracellular pr 80.4 14 0.00048 30.3 9.8 62 54-126 34-100 (120)
142 2r39_A FIXG-related protein; s 66.0 14 0.00049 30.0 6.6 47 216-272 34-82 (118)
143 2gsm_B Cytochrome C oxidase su 63.8 24 0.00083 33.2 8.5 63 207-288 171-233 (262)
144 3hb3_B Cytochrome C oxidase su 62.5 26 0.00088 33.6 8.5 62 207-287 189-250 (298)
145 1cyx_A CYOA; electron transpor 58.9 22 0.00076 32.0 6.9 73 54-141 41-115 (205)
146 2x3c_A Toxic extracellular end 56.5 4.2 0.00014 40.1 1.8 26 100-125 95-125 (343)
147 1v54_B Cytochrome C oxidase po 53.5 40 0.0014 30.9 7.9 63 207-288 140-202 (227)
148 1xwv_A DER F II; beta sheets, 50.2 29 0.00099 28.6 5.9 70 44-114 15-92 (129)
149 2wtp_A ORF131 protein, CZCE; m 49.6 6.9 0.00024 32.4 1.8 17 55-71 72-88 (131)
150 1yew_A Particulate methane mon 44.3 50 0.0017 32.2 7.1 16 99-114 319-334 (382)
151 2gsm_B Cytochrome C oxidase su 42.4 57 0.0019 30.6 7.2 75 54-143 171-247 (262)
152 2c34_A ICP, inhibitor of cyste 42.4 59 0.002 26.2 6.4 67 53-120 14-88 (116)
153 1nep_A EPV20, BNPC2, epididyma 41.6 39 0.0013 27.9 5.3 69 45-114 18-94 (130)
154 1fft_B Ubiquinol oxidase; elec 40.0 29 0.001 33.6 4.8 62 207-287 151-212 (315)
155 3hb3_B Cytochrome C oxidase su 39.9 74 0.0025 30.4 7.6 76 54-144 189-266 (298)
156 2h7w_A Chagasin; beta-strands, 39.6 1.3E+02 0.0046 24.7 8.3 64 53-120 32-103 (131)
157 1xq4_A Protein APAG; all beta 39.4 35 0.0012 28.7 4.6 55 65-120 38-100 (139)
158 2p9r_A Alpha-2-M, alpha-2-macr 38.9 20 0.0007 28.0 3.0 68 211-284 13-84 (102)
159 2f1e_A Protein APAG; APAG prot 38.8 43 0.0015 27.6 5.1 55 65-120 34-96 (127)
160 1tza_A APAG protein, SOR45; st 35.5 32 0.0011 28.7 3.8 55 65-120 33-95 (134)
161 1xvs_A Protein APAG; MCSG APC2 34.3 42 0.0015 27.6 4.3 49 65-114 33-87 (126)
162 4ubp_B Protein (urease (chain 34.1 67 0.0023 26.2 5.3 60 55-114 18-89 (126)
163 4ac7_B Urease subunit beta; hy 34.1 67 0.0023 26.2 5.3 60 55-114 18-89 (126)
164 2cio_B Inhibitor of cysteine p 33.0 1.5E+02 0.005 24.1 7.4 23 53-75 12-34 (121)
165 2wtp_A ORF131 protein, CZCE; m 30.3 16 0.00054 30.3 1.0 24 207-230 71-94 (131)
166 2xzz_A Protein-glutamine gamma 28.3 58 0.002 25.6 4.0 53 62-120 22-78 (102)
167 4ep8_B Urease subunit beta; al 26.8 1.2E+02 0.0041 23.7 5.3 60 55-114 12-83 (101)
168 1xvs_A Protein APAG; MCSG APC2 26.3 94 0.0032 25.5 5.1 50 216-268 31-84 (126)
169 2f1e_A Protein APAG; APAG prot 25.1 1.1E+02 0.0037 25.2 5.2 50 216-268 32-85 (127)
170 1v54_B Cytochrome C oxidase po 24.1 1.4E+02 0.0049 27.1 6.4 74 54-143 140-216 (227)
171 1tza_A APAG protein, SOR45; st 24.0 99 0.0034 25.7 4.8 50 216-268 31-84 (134)
172 3rpf_C Molybdopterin convertin 23.7 28 0.00097 25.4 1.3 25 42-66 42-67 (74)
173 1gui_A Laminarinase 16A; carbo 23.3 3.1E+02 0.011 22.6 8.6 18 208-225 66-83 (155)
174 2x3c_A Toxic extracellular end 23.3 3.3E+02 0.011 26.4 9.3 67 216-284 39-127 (343)
175 2hj1_A Hypothetical protein; s 23.2 25 0.00084 27.6 0.9 24 43-66 59-82 (97)
176 4ay0_A Chaperone protein CAF1M 22.7 1.4E+02 0.0047 27.0 6.0 64 206-273 65-129 (218)
177 2r5o_A Putative ATP binding co 22.0 2.5E+02 0.0086 24.3 7.6 74 208-284 63-145 (188)
178 1x9u_A Umecyanin; cupredoxin, 21.9 92 0.0031 25.1 4.1 35 110-145 72-108 (116)
179 1xq4_A Protein APAG; all beta 21.1 1.1E+02 0.0037 25.6 4.5 50 216-268 36-89 (139)
180 3sob_L Antibody light chain; b 20.8 89 0.0031 27.4 4.4 27 54-80 32-58 (237)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=3.9e-98 Score=808.57 Aligned_cols=487 Identities=29% Similarity=0.507 Sum_probs=391.6
Q ss_pred ceeEEEEEEEEEEeeeccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCC-CCceEEeCCcccCCCCCCCCCCCccc
Q 009392 21 CRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-YNVTIHWHGVRQLRTGWADGPAYITQ 99 (535)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~~~~~~~~~DGvp~~tq 99 (535)
+++|+|+|+|++..+++||.++.+|+|||++|||+|||++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++||
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 37899999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred CcCCCCCeEEEEEEeCCCCcceeEecChhhhh-cccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHHHHHHHHh
Q 009392 100 CPIQSGHSYVYNFTITGQRGTLLWHAHILWLR-ATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQ 178 (535)
Q Consensus 100 ~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 178 (535)
|+|+||++|+|+|++ +++||||||||...|+ +||+|+|||++++....++ ..++|++|+++||++.+..+++.....
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999999 8999999999999988 9999999999987654455 346899999999999988776644322
Q ss_pred CC-CCCCCCceEEEcCccCCCCCC-------------CCC-----CceeEEEeCCCEEEEEEEEcCCCceEEEEEcCcee
Q 009392 179 SG-LAPNVSDSHTINGQPGPISSC-------------SSQ-----GGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKL 239 (535)
Q Consensus 179 ~g-~~~~~~~~~liNG~~~~~~~~-------------~~~-----~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 239 (535)
.. .....+++++|||+.. ++| +.. ..+.++|++|++|||||||+|..+.+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 11 1112468999999974 333 321 22489999999999999999999999999999999
Q ss_pred EEEEeCCcccceeEeceEEeCCCceEEEEEEe-CCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCC--CCCCCC
Q 009392 240 TVVEVDATYVKPFKTDNIVIAPGQTTNVLLSA-DKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASS--ATTLTS 316 (535)
Q Consensus 240 ~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~-~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~--~~~~~~ 316 (535)
+|||+||.+++|+.++++.|+|||||||+|++ ++++|+|||++.... +. .+.....|+|+|.++.... .+..+.
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~--~~~~~~~ail~y~~~~~~~~p~~~~p~ 313 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH--PNTPPGLTLLNYLPNSVSKLPTSPPPQ 313 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC--CCSCCEEEEEEETTSCTTSCCSSCCCC
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC--CCCccEEEEEEECCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999 555799999998753 21 2345789999999866421 112233
Q ss_pred CCCCCCcccccccccccccccCCCCCCCCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhh
Q 009392 317 TPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHF 396 (535)
Q Consensus 317 ~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~ 396 (535)
.|.+++...... ..++.+..+. +...|..+++++.+.++.+.. + ....|+|||++|..|+.|+|.+.+
T Consensus 314 ~p~~~~~~~~~~--~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~--------~-~~~~w~iNg~s~~~p~~P~L~~~~ 381 (552)
T 1aoz_A 314 TPAWDDFDRSKN--FTYRITAAMG-SPKPPVKFNRRIFLLNTQNVI--------N-GYVKWAINDVSLALPPTPYLGAMK 381 (552)
T ss_dssp CCCTTCHHHHHH--HHTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE--------T-TEEEEEETTEEECCCSSCHHHHHH
T ss_pred CCcccccccccc--ccccccccCC-CCCCCCCCcEEEEEEEeeccC--------C-CeEEEEECCCccCCCCCCHHHHHh
Confidence 444443322111 1233333222 223455678888877654321 2 256799999999999889999888
Q ss_pred cccCCccccCCCCCCC-ccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCC---CCCCCeeecCCCeEEEeecC
Q 009392 397 FNISGVFTTDFPGNPP-HTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIA---PENHPVHLHGFNFFAVGKGL 472 (535)
Q Consensus 397 ~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~---~~~HP~HlHG~~F~Vl~~g~ 472 (535)
.+++|++..+++..++ ..|+....+.+...+.++.++.++.|++|||+|+|.+.+. ...||||||||+||||++|.
T Consensus 382 ~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~ 461 (552)
T 1aoz_A 382 YNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGD 461 (552)
T ss_dssp TTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEE
T ss_pred hcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEeccc
Confidence 8877877766654332 1244332222223456778899999999999999976443 56799999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCCCCCCeeeec------cCceeee
Q 009392 473 GNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXXXXXAQIIQE------YGLCIAI 527 (535)
Q Consensus 473 g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adnPG~w~~HCH------~gm~~~~ 527 (535)
|.|++ .+...+|+.+|+|||||.||++||++|||++||||.|+|||| .|||..|
T Consensus 462 G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~ 521 (552)
T 1aoz_A 462 GKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF 521 (552)
T ss_dssp SSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEE
T ss_pred CccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEE
Confidence 99987 445678999999999999999999999999999999999999 8999887
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=9e-97 Score=791.36 Aligned_cols=453 Identities=25% Similarity=0.400 Sum_probs=366.9
Q ss_pred ceeEEEEEEEEEEeeeccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCC-CCceEEeCCcccCCCCCCCCCCCccc
Q 009392 21 CRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-YNVTIHWHGVRQLRTGWADGPAYITQ 99 (535)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~~~~~~~~~DGvp~~tq 99 (535)
+++|+|+|++++..+++||..+.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||++|.+++|+||+|++||
T Consensus 65 ~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq 144 (580)
T 3sqr_A 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQ 144 (580)
T ss_dssp CCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTB
T ss_pred ceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCcccc
Confidence 67999999999999999999999999999999999999999999999999998 89999999999999999999999999
Q ss_pred CcCCCCCeEEEEEEeCCCCcceeEecChhhhh-cccEEEEEEeCCCCCCCCCCCCCceE-EEEEEeeccCChHHHHHHHH
Q 009392 100 CPIQSGHSYVYNFTITGQRGTLLWHAHILWLR-ATVHGAIVILPKRGVPYPFPKPHKEV-VVVLAEWWKSDTEAVINQAL 177 (535)
Q Consensus 100 ~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~~ 177 (535)
|||+||++|+|+|++ .|+||||||||...|+ +||+|+|||+++.+. .+|.|. +|+++||+++...+++....
T Consensus 145 ~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d~~~l~l~Dw~~~~~~~~~~~~~ 218 (580)
T 3sqr_A 145 CPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDEDVGVIFLQDWAHESVFEIWDTAR 218 (580)
T ss_dssp CCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHHHHHT
T ss_pred CCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCccceEEEEEEEecCCHHHHHHHHh
Confidence 999999999999999 7999999999999998 899999999987653 347787 99999999999888877655
Q ss_pred hCCCCCCCCceEEEcCccCCCCCCCC---------CCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcc
Q 009392 178 QSGLAPNVSDSHTINGQPGPISSCSS---------QGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATY 248 (535)
Q Consensus 178 ~~g~~~~~~~~~liNG~~~~~~~~~~---------~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 248 (535)
..+ +..+++++|||+.. ++|+. ...+.++|++|++|||||||+|....+.|+|+||+|+|||+||.+
T Consensus 219 ~~~--~~~~d~~liNG~~~--~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~ 294 (580)
T 3sqr_A 219 LGA--PPALENTLMNGTNT--FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVP 294 (580)
T ss_dssp TSC--CCCBSEEEETTBCC--CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred ccC--CCCCceEEECCccc--CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCcc
Confidence 432 44779999999964 45542 246899999999999999999999999999999999999999999
Q ss_pred cceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccc
Q 009392 249 VKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANK 328 (535)
Q Consensus 249 v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~ 328 (535)
++|+.+++|.|+|||||||+|++++++|+|||++.+...|.....+....|||+|.+++...+ ..+.++.......
T Consensus 295 v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P----~~~~~~~~~~~~~ 370 (580)
T 3sqr_A 295 IVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANP----TSVGTTPRGTCED 370 (580)
T ss_dssp EEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCC----CCCCCCCCCCSCC
T ss_pred CCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCC----CCCCCCccchhhc
Confidence 999999999999999999999999988999999998655532233456899999987653322 1111111111110
Q ss_pred -cccccccccCCCCCCCCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCccccc-ChhhHHHhhhcccCCccccC
Q 009392 329 -FIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVM-PTIALLQAHFFNISGVFTTD 406 (535)
Q Consensus 329 -~~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~-p~~~~l~~~~~~~~~~~~~~ 406 (535)
....|.++. +..+|...+.++.+.++ .+..+.|++||++|.. ++.|+|.+.+.+. .+
T Consensus 371 ~~~~~L~P~~----~~~~~~~~~~~~~l~~~------------~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~-----~~ 429 (580)
T 3sqr_A 371 EPVASLVPHL----ALDVGGYSLVDEQVSSA------------FTNYFTWTINSSSLLLDWSSPTTLKIFNNE-----TI 429 (580)
T ss_dssp SCGGGCCBSS----CCBCCSEEEEEEEEEEE------------ESSSEEEEETTBCCCCCTTSCHHHHHHTTC-----CC
T ss_pred ccccccccCC----CCCCCCccceEEEEEec------------cCCceeEEECCEecccCCCCCchhhhhcCC-----cc
Confidence 012233321 22334344555544442 2246789999999974 5677766544321 12
Q ss_pred CCCCCCccccCCCCCCCCccCCCceeEEee----CCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCC
Q 009392 407 FPGNPPHTYNFTGTPKNLQTSNGTKAYRLA----YNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPK 482 (535)
Q Consensus 407 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~----~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~ 482 (535)
++ ...+++.++ .|++|||+|+|.+.. ...||||||||+||||++|.|.|++.++..
T Consensus 430 ~~-------------------~~~~~~~~~~~~~~~~~VeiVi~n~~~~-~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~ 489 (580)
T 3sqr_A 430 FP-------------------TEYNVVALEQTNANEEWVVYVIEDLTGF-GIWHPIHLHGHDFFIVAQETDVFNSDESPA 489 (580)
T ss_dssp CC-------------------GGGCEEEECC----CCEEEEEEEECSSS-CCCEEEEESSCCEEEEEEESSCCCTTTSGG
T ss_pred CC-------------------CCcceeecccccCCCcEEEEEEeCCCcc-ccceeeEecCceEEEEecCCCccCcccccc
Confidence 21 123445554 699999999997532 579999999999999999999999877677
Q ss_pred CCCCCCCCccceEEeCCCCEEEECCCCCCCCCCeeeec------cCceeeee
Q 009392 483 KFNLVDPVERNTIGVPSGGWVAIRXXXXXXXXAQIIQE------YGLCIAIW 528 (535)
Q Consensus 483 ~~n~~~p~~RDTv~vp~~g~~virf~adnPG~w~~HCH------~gm~~~~~ 528 (535)
.+|++||++||||.||++||++|||++||||+|+|||| .||+..+-
T Consensus 490 ~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~ 541 (580)
T 3sqr_A 490 KFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFV 541 (580)
T ss_dssp GCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEE
T ss_pred ccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEE
Confidence 89999999999999999999999999999999999999 78877653
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=1.6e-92 Score=750.35 Aligned_cols=448 Identities=27% Similarity=0.442 Sum_probs=353.3
Q ss_pred eEEEEEEEEEEeeeccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCC-----CceEEeCCcccCCCCCCCCCCCc
Q 009392 23 VRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKY-----NVTIHWHGVRQLRTGWADGPAYI 97 (535)
Q Consensus 23 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~-----~t~iH~HG~~~~~~~~~DGvp~~ 97 (535)
-..|+|+|++..+++||..+.+++|||++|||+||+++||+|+|+|+|+|++ +|+|||||+++..++|+||+|++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 4689999999999999999999999999999999999999999999999984 79999999999999999999999
Q ss_pred ccCcCCCCCeEEEEEEeCCCCcceeEecChhhhh-cccEEEEEEeCCCCCC-CCCCCCCceEEEEEEeeccCChHHHHHH
Q 009392 98 TQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLR-ATVHGAIVILPKRGVP-YPFPKPHKEVVVVLAEWWKSDTEAVINQ 175 (535)
Q Consensus 98 tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~iiV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 175 (535)
|||+|+||++|+|+|++++++||||||||...|+ +||+|+|||+++.+.. .+++..++|++|+++||+++....
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT----
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc----
Confidence 9999999999999999977899999999999998 9999999999876522 123333567899999999976532
Q ss_pred HHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEec
Q 009392 176 ALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTD 255 (535)
Q Consensus 176 ~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d 255 (535)
.+..+..+++++|||+.. ...|.....+.++|++|++|||||||+|....+.|+|+||+|+|||+||.+++|+.++
T Consensus 159 ---~~~~p~~~d~~liNG~~~-~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 234 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGKGR-APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVD 234 (499)
T ss_dssp ---SCSSCSSCSEEEETTBCC-CTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred ---ccCCCCCCcEEEECCCCc-CCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEee
Confidence 233445789999999953 3333445668999999999999999999999999999999999999999999999999
Q ss_pred eEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccccc
Q 009392 256 NIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRS 335 (535)
Q Consensus 256 ~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 335 (535)
+|.|+|||||||+|++++++|+|||++.+...+. .+.+....|+|+|.+++...+.. +..... .......|++
T Consensus 235 ~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~~p~~----~~~~~~--~~~~~~~L~p 307 (499)
T 3pxl_A 235 SIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNV-GFDGGINSAILRYDGAPAVEPTT----NQTTSV--KPLNEVDLHP 307 (499)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSSCCCC----CCCCCS--SBCCGGGCCB
T ss_pred eEEECCCcEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEeCCCCCCCCCC----CCCCCC--cccccccccc
Confidence 9999999999999999987799999998754332 23333458999998865432211 111110 0111234555
Q ss_pred ccCCCCCC-CCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCcc
Q 009392 336 LNSKKYPA-KVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHT 414 (535)
Q Consensus 336 l~~~~~p~-~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~ 414 (535)
+.....|. ..+..+|+++.+.++++ +. .|+|||++|..|+.|+|.+.+.+ ..... +
T Consensus 308 ~~~~~~p~~~~~~~~d~~~~l~~~~~-----------~~--~w~iNg~s~~~~~~P~L~~~~~g---~~~~~--~----- 364 (499)
T 3pxl_A 308 LVSTPVPGAPSSGGVDKAINMAFNFN-----------GS--NFFINGASFVPPTVPVLLQILSG---AQTAQ--D----- 364 (499)
T ss_dssp SSCCCCSSCSSTTCSSEEEECCEEEC-----------SS--CEEETTBCCCCCSSCHHHHHHTT---CCSTT--T-----
T ss_pred cccccCCCcccCCCCcEEEEEEEEec-----------Cc--EEEEcCEecCCCCCchhhhhhcC---Ccccc--c-----
Confidence 54333332 12345677776655432 22 58999999998888776654322 11100 0
Q ss_pred ccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccce
Q 009392 415 YNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNT 494 (535)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDT 494 (535)
......++.++.|++|||+|+|.+....+.||||||||+||||+++ | ...+|+.||+||||
T Consensus 365 -----------~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~-g-------~~~~n~~~P~~rDt 425 (499)
T 3pxl_A 365 -----------LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSA-G-------STVYNYDNPIFRDV 425 (499)
T ss_dssp -----------SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECT-T-------CCCCCSSSCCEESE
T ss_pred -----------cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEecc-C-------CcccccCCCCccce
Confidence 0123457899999999999995322346789999999999999875 3 23578899999999
Q ss_pred EEeCC---CCEEEECCCCCCCCCCeeeec------cCceeee
Q 009392 495 IGVPS---GGWVAIRXXXXXXXXAQIIQE------YGLCIAI 527 (535)
Q Consensus 495 v~vp~---~g~~virf~adnPG~w~~HCH------~gm~~~~ 527 (535)
+.||+ ++|++|||++||||.|+|||| .||+..|
T Consensus 426 v~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~ 467 (499)
T 3pxl_A 426 VSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVM 467 (499)
T ss_dssp EECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEE
T ss_pred EEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEE
Confidence 99997 899999999999999999999 7887665
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=2.1e-92 Score=749.43 Aligned_cols=447 Identities=25% Similarity=0.419 Sum_probs=351.6
Q ss_pred eEEEEEEEEEEeeeccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCC-----CceEEeCCcccCCCCCCCCCCCc
Q 009392 23 VRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKY-----NVTIHWHGVRQLRTGWADGPAYI 97 (535)
Q Consensus 23 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~-----~t~iH~HG~~~~~~~~~DGvp~~ 97 (535)
-..|+|+|++..+++||..+.+++|||++|||+||+++||+|+|+|+|+|++ +|+|||||+++.+++|+||+|++
T Consensus 4 ~~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 83 (495)
T 3t6v_A 4 GPVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFI 83 (495)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred CCeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 3689999999999999999999999999999999999999999999999985 79999999999999999999999
Q ss_pred ccCcCCCCCeEEEEEEeCCCCcceeEecChhhhh-cccEEEEEEeCCCCCC-CCCCCCCceEEEEEEeeccCChHHHHHH
Q 009392 98 TQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLR-ATVHGAIVILPKRGVP-YPFPKPHKEVVVVLAEWWKSDTEAVINQ 175 (535)
Q Consensus 98 tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~iiV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 175 (535)
|||+|+||++|+|+|++++++||||||||...|+ +||+|+|||+++.+.. .+++..++|++|+++||+++....+
T Consensus 84 tq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~--- 160 (495)
T 3t6v_A 84 TQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM--- 160 (495)
T ss_dssp TBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS---
T ss_pred ccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh---
Confidence 9999999999999999977999999999999998 9999999999876532 2233345678999999999876431
Q ss_pred HHhCCCCCCCCceEEEcCccCCCCCCC--CCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeE
Q 009392 176 ALQSGLAPNVSDSHTINGQPGPISSCS--SQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFK 253 (535)
Q Consensus 176 ~~~~g~~~~~~~~~liNG~~~~~~~~~--~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~ 253 (535)
.+..+..+++++|||+.. +.|. ....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.
T Consensus 161 ---~~~~p~~~d~~liNG~g~--~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 ---GAGGAITADSTLIDGLGR--THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp ---CSSSCCCCSEEEETTBCC--BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred ---ccCCCCCCcEEEECCcCc--CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 233445789999999953 3343 245689999999999999999999999999999999999999999999999
Q ss_pred eceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCccccccccccc
Q 009392 254 TDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSL 333 (535)
Q Consensus 254 ~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 333 (535)
++++.|+|||||||+|++++++|+|||++.+...+. .+.+....|+|+|.++....+... . +..... ......|
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~~p~~~-~-~~~~~~---~~~~~~L 309 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGE-GFDGGINSAILRYDGATTADPVTV-A-STVHTK---CLIETDL 309 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSSCCCCC-C-CSSCSS---BCCGGGC
T ss_pred eeeEEEcCceEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEECCCCCCCCCCC-C-CCCCcc---ccccccc
Confidence 999999999999999999987799999998754332 233334589999987654322110 0 100000 0112345
Q ss_pred ccccCCCCCC-CCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCC
Q 009392 334 RSLNSKKYPA-KVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPP 412 (535)
Q Consensus 334 ~~l~~~~~p~-~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p 412 (535)
+++.....|. ..+..+++++.+.++++ +. .|+|||++|..|+.|+|.+.+.+ .+... +
T Consensus 310 ~p~~~~~~p~~~~~~~~d~~~~l~~~~~-----------~~--~w~iNg~s~~~~~~P~L~~~~~g---~~~~~--~--- 368 (495)
T 3t6v_A 310 HPLSRNGVPGNPHQGGADCNLNLSLGFA-----------CG--NFVINGVSFTPPTVPVLLQICSG---ANTAA--D--- 368 (495)
T ss_dssp CBSSCCCCSSCSSTTCSSEEEECCEEEE-----------TT--EEEETTBCCCCCSSCHHHHHHTT---CCSST--T---
T ss_pred cccccccCCCccCCCCCcEEEEEEEEec-----------Cc--EEEEcCEecCCCCCcchhhhhcC---CcCcc--c---
Confidence 5554332232 12344677766655432 22 58999999998888766654322 11100 0
Q ss_pred ccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCcc
Q 009392 413 HTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVER 492 (535)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~R 492 (535)
......++.++.|++|||+|+|. ...+.||||||||+|+||+++ | ...+|+.||+||
T Consensus 369 -------------~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~-g-------~~~~n~~~P~~r 425 (495)
T 3t6v_A 369 -------------LLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESA-S-------NSTSNYDDPIWR 425 (495)
T ss_dssp -------------SSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECT-T-------CCCCCSSSCCEE
T ss_pred -------------ccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecC-C-------CCCcccCCCCCc
Confidence 01234578999999999999842 236799999999999999875 3 235788999999
Q ss_pred ceEEeCC-CCEEEECCCCCCCCCCeeeec------cCceeee
Q 009392 493 NTIGVPS-GGWVAIRXXXXXXXXAQIIQE------YGLCIAI 527 (535)
Q Consensus 493 DTv~vp~-~g~~virf~adnPG~w~~HCH------~gm~~~~ 527 (535)
|||.||+ ++|++|||++||||.|+|||| .||+..|
T Consensus 426 Dtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~ 467 (495)
T 3t6v_A 426 DVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVF 467 (495)
T ss_dssp SEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEE
T ss_pred cEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEE
Confidence 9999997 899999999999999999999 7887765
No 5
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.2e-92 Score=759.49 Aligned_cols=469 Identities=27% Similarity=0.439 Sum_probs=350.4
Q ss_pred ChhHHHHHHHHHHHhcccccceeEEEEEEEEEEeeeccCC-ceeEEEECCCCCCcEEEEecCCEEEEEEEECCC-----C
Q 009392 1 MDSWVRLLLLVACLFPALVECRVRHYKFNVVMKNSTKLCS-SKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-----Y 74 (535)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-----~ 74 (535)
|.++.+++.|++++...++++.+.+|+|++++..+++||. .+.+|+|||++|||+||+++||+|+|+|+|+|+ +
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~ 80 (521)
T 1v10_A 1 MPSFASLKSLVVLSLTSLSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRR 80 (521)
T ss_dssp ---------------------CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCC
T ss_pred CchhHHHHHHHHHHhhhhhcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCC
Confidence 4444444444444444556678899999999999999999 999999999999999999999999999999999 9
Q ss_pred CceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecChhhhh-cccEEEEEEeCCCCC-CCCCCC
Q 009392 75 NVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLR-ATVHGAIVILPKRGV-PYPFPK 152 (535)
Q Consensus 75 ~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~iiV~~~~~~-~~~~~~ 152 (535)
+|+|||||+++.+++|+||+|++|||+|+||++|+|+|++.+++||||||||.+.|+ +||+|+|||+++.+. ..+++.
T Consensus 81 ~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~ 160 (521)
T 1v10_A 81 ATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDV 160 (521)
T ss_dssp CBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSB
T ss_pred CceEecCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCC
Confidence 999999999999999999999999999999999999999768999999999999998 899999999987642 222333
Q ss_pred CCceEEEEEEeeccCChHHHHHHHHhCCCCCCCCceEEEcCccCCCCCCC--CCCceeEEEeCCCEEEEEEEEcCCCceE
Q 009392 153 PHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCS--SQGGFTLPVDSGKTYMLRIINAALNEEL 230 (535)
Q Consensus 153 ~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~--~~~~~~~~v~~G~~~rlRliN~~~~~~~ 230 (535)
.++|++|+++||+++...++... .+.....+++++|||+.. +.|. ....+.++|++|++|||||||+|..+.+
T Consensus 161 d~~e~~l~l~D~~~~~~~~~~~~---~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~ 235 (521)
T 1v10_A 161 DDASTVITIADWYHSLSTVLFPN---PNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNY 235 (521)
T ss_dssp CSGGGEEEEEEECSSCCC----------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCE
T ss_pred CCceeEEEEcccccCCHHHHhhc---cCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccE
Confidence 34689999999999877655321 122234579999999974 5564 2345899999999999999999999999
Q ss_pred EEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCC
Q 009392 231 FFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASS 310 (535)
Q Consensus 231 ~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~ 310 (535)
.|+|+||+|+|||+||.+++|+.++++.|+|||||||+|++++++|+|||++.+...+. .+......|+|+|.++....
T Consensus 236 ~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~-~~~~~~~~ail~y~~~~~~~ 314 (521)
T 1v10_A 236 AFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRN-GFTGGINSAIFRYQGAAVAE 314 (521)
T ss_dssp EEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTCCSCC
T ss_pred EEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccc-cCCCCceeEEEEECCCCCCC
Confidence 99999999999999999999999999999999999999999987799999998754322 12222347999999865432
Q ss_pred CCCCCCCCCCCCcccccccccccccccCCCCCC-CCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChh
Q 009392 311 ATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPA-KVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTI 389 (535)
Q Consensus 311 ~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~-~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~ 389 (535)
+.. +....... ....|+++.....|. ..+...+.++.+.+.+ ++....|+|||++|..+..
T Consensus 315 p~~----~~~~~~~~---~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~-----------~~~~~~~~iNg~~~~~~~~ 376 (521)
T 1v10_A 315 PTT----SQNSGTAL---NEANLIPLINPGAPGNPVPGGADINLNLRIGR-----------NATTADFTINGAPFIPPTV 376 (521)
T ss_dssp CCC----CCCCSCBC---CGGGCCBSSCCCCSSCSSTTCSSEEEECCEEC-----------CSSSSCCEESSCCCCCCSS
T ss_pred CCC----CCCccccc---chhhcccCCcccCCCcccCCcceEEEEEEEec-----------CCceeEEEECCCcccCCCC
Confidence 111 11000000 012344443222221 1122344444433322 2223458999999988877
Q ss_pred hHHHhhhcccCCccc-cCCCCCCCccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEE
Q 009392 390 ALLQAHFFNISGVFT-TDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAV 468 (535)
Q Consensus 390 ~~l~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl 468 (535)
|+|.+.+.+ ... .+ .+.++.++.++.|++|||++.| .+.||||||||+||||
T Consensus 377 P~l~~~~~g---~~~~~~-------------------~~~~~~~~~v~~g~~vei~l~N-----~~~HP~HLHGh~F~Vl 429 (521)
T 1v10_A 377 PVLLQILSG---VTNPND-------------------LLPGGAVISLPANQVIEISIPG-----GGNHPFHLHGHNFDVV 429 (521)
T ss_dssp CHHHHHHHT---CCCGGG-------------------SSSTTTEEEECTTCEEEEEEEC-----CBSCEEEESSCCEEEE
T ss_pred chhhhhhcC---Cccccc-------------------CCCCceEEEecCCCEEEEEEcC-----CCCCCEEEccceEEEE
Confidence 766654322 110 01 1234568899999999999999 3689999999999999
Q ss_pred eecCCCCCCCCCCCCCCCCCCCccceEEe-CCCCEEEECCCCCCCCCCeeeec------cCceeeee
Q 009392 469 GKGLGNFNPKKDPKKFNLVDPVERNTIGV-PSGGWVAIRXXXXXXXXAQIIQE------YGLCIAIW 528 (535)
Q Consensus 469 ~~g~g~~~~~~~~~~~n~~~p~~RDTv~v-p~~g~~virf~adnPG~w~~HCH------~gm~~~~~ 528 (535)
+++.+. .+|+.+|+|||||.| |++||++|||++||||.|+|||| .|||..|-
T Consensus 430 ~~~~~~--------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~ 488 (521)
T 1v10_A 430 RTPGSS--------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFA 488 (521)
T ss_dssp ECTTCS--------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEE
T ss_pred ecCCCC--------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEE
Confidence 998542 357889999999999 89999999999999999999999 88888764
No 6
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-91 Score=751.85 Aligned_cols=450 Identities=23% Similarity=0.344 Sum_probs=357.1
Q ss_pred eeEEEEEEEEEEeeeccC-CceeEEEECCCCCCcEEEEecCCEEEEEEEECCC-CCceEEeCCcccCCCCCCCCCCCccc
Q 009392 22 RVRHYKFNVVMKNSTKLC-SSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-YNVTIHWHGVRQLRTGWADGPAYITQ 99 (535)
Q Consensus 22 ~~~~~~l~~~~~~~~~~g-~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~~~~~~~~~DGvp~~tq 99 (535)
++|+|+|+|++..+++|| .++.+|+|||++|||+||+++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 479999999999999999 7999999999999999999999999999999998 99999999999999999999999999
Q ss_pred CcCCCCCeEEEEEEeCCCCcceeEecChhhhh-cccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHHHHHHHHh
Q 009392 100 CPIQSGHSYVYNFTITGQRGTLLWHAHILWLR-ATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQ 178 (535)
Q Consensus 100 ~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 178 (535)
|+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+ |+ .+++|++|+++||+++...++...+..
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999955999999999999998 99999999999864 22 457899999999999998887665432
Q ss_pred C---CCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEec
Q 009392 179 S---GLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTD 255 (535)
Q Consensus 179 ~---g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d 255 (535)
. .+....++++||||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~----------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~ 226 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN----------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTD 226 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS----------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCCCceEEECCCCc----------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEec
Confidence 1 12234679999999965 8999999999999999999999999999999999999999999999999
Q ss_pred eEEeCCCceEEEEEEeCCC-CceeEEEeecCCCCCc---ccCCCceEEEEEEcCCCCCCCCC-CCCCCC-CCCccccccc
Q 009392 256 NIVIAPGQTTNVLLSADKT-SGKYLVAASPFMDAPI---AVDNVTATATLHYSGTLASSATT-LTSTPP-KNGTAIANKF 329 (535)
Q Consensus 256 ~l~l~pGeR~dv~v~~~~~-~g~y~i~~~~~~~~~~---~~~~~~~~ail~Y~~~~~~~~~~-~~~~p~-~~~~~~~~~~ 329 (535)
+|.|+|||||||+|++++. .|+|||++.....+.. ........|+|+|.++.....+. ....+. +++
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~------- 299 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDD------- 299 (534)
T ss_dssp CEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCG-------
T ss_pred eEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCccccccccccc-------
Confidence 9999999999999999864 4799999986433211 11234678999998764321110 111111 111
Q ss_pred ccccccccCCCCCCCCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCC
Q 009392 330 IDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPG 409 (535)
Q Consensus 330 ~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~ 409 (535)
..++++.. ..++..+++++.+.+.+... .++ ...|+|||++|..|+.|+|...+.. +.+. .
T Consensus 300 -~~l~p~~~----~~~~~~~~~~~~l~~~~~~~-------~~~-~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~----~ 360 (534)
T 1zpu_A 300 -FYLQPYEK----EAIYGEPDHVITVDVVMDNL-------KNG-VNYAFFNNITYTAPKVPTLMTVLSS--GDQA----N 360 (534)
T ss_dssp -GGCCBSSC----CCCCCSCSEEEEEEEEEEEC-------TTS-CEEEEETTBCCCCCSSCHHHHHTTS--GGGT----T
T ss_pred -ccceeCCC----CCCCCCCCeEEEEEEEeecc-------CCc-eeEEEECCCcccCCCCCceeeeccc--Cccc----C
Confidence 12333221 12334567887777655321 133 2358999999998888766553321 1111 0
Q ss_pred CCCccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCC----------CCCCCC
Q 009392 410 NPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLG----------NFNPKK 479 (535)
Q Consensus 410 ~~p~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g----------~~~~~~ 479 (535)
. +.. ...++.++.++.|++|+|+|+|.+ .+.||||||||+||||+++.+ .|++..
T Consensus 361 ~-~~~-----------~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~ 425 (534)
T 1zpu_A 361 N-SEI-----------YGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDN 425 (534)
T ss_dssp C-GGG-----------GCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTB
T ss_pred C-Ccc-----------cCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCccccccCcccccCccc
Confidence 0 111 122466789999999999999975 679999999999999999864 454432
Q ss_pred CCCCCCCCCCCccceEEeCCCCEEEECCCCCCCCCCeeeec------cCceeeee
Q 009392 480 DPKKFNLVDPVERNTIGVPSGGWVAIRXXXXXXXXAQIIQE------YGLCIAIW 528 (535)
Q Consensus 480 ~~~~~n~~~p~~RDTv~vp~~g~~virf~adnPG~w~~HCH------~gm~~~~~ 528 (535)
. .....+|+|||||.||++||++|||++||||.|+|||| .|||..+-
T Consensus 426 -~-~~~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~ 478 (534)
T 1zpu_A 426 -H-PAFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLV 478 (534)
T ss_dssp -C-CCCCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEE
T ss_pred -c-ccccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEE
Confidence 1 12357899999999999999999999999999999999 88888764
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=5.2e-89 Score=736.46 Aligned_cols=460 Identities=22% Similarity=0.357 Sum_probs=354.6
Q ss_pred cceeEEEEEEEEEEe--eeccCCc-eeEEEECCCCCCcEEEEecCCEEEEEEEECC-CCCceEEeCCcccCCCCCCCCCC
Q 009392 20 ECRVRHYKFNVVMKN--STKLCSS-KPIVTVNRKFPGPTLYAREHDTVLVKVVNHV-KYNVTIHWHGVRQLRTGWADGPA 95 (535)
Q Consensus 20 ~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l-~~~t~iH~HG~~~~~~~~~DGvp 95 (535)
.+++++|+|++++.. +++||+. +.+|+|||++|||+|||++||+|+|+|+|+| +++|+|||||+++.+++|+||+|
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~ 109 (559)
T 2q9o_A 30 TGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGAN 109 (559)
T ss_dssp CCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCB
T ss_pred CCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCC
Confidence 467899999999998 8899999 9999999999999999999999999999999 68999999999999999999999
Q ss_pred CcccCcCCC-CCeEEEEEEeCCCCcceeEecChhhhh-cccEEEEEEeCCCCCCCCCCCCCceE-EEEEEeeccCChHHH
Q 009392 96 YITQCPIQS-GHSYVYNFTITGQRGTLLWHAHILWLR-ATVHGAIVILPKRGVPYPFPKPHKEV-VVVLAEWWKSDTEAV 172 (535)
Q Consensus 96 ~~tq~~i~P-G~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~ 172 (535)
++|||+|+| |++|+|+|++ .++||||||||...|+ +||+|+|||+++... .++.|. +|+++||+++...++
T Consensus 110 ~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~~~~~ 183 (559)
T 2q9o_A 110 GVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRAADDL 183 (559)
T ss_dssp TTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHH
T ss_pred ccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCCHHHH
Confidence 999999999 9999999998 7899999999999888 899999999987653 346777 999999999988876
Q ss_pred HHHHHhCCCCCCCCceEEEcCccCCCCCCC-CCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccce
Q 009392 173 INQALQSGLAPNVSDSHTINGQPGPISSCS-SQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKP 251 (535)
Q Consensus 173 ~~~~~~~g~~~~~~~~~liNG~~~~~~~~~-~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P 251 (535)
+.... .+ .+..+++++|||+... .|. .+..+.++|++|++|||||||+|....+.|+|+||+|+|||+||.+++|
T Consensus 184 ~~~~~-~~-~~~~~d~~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p 259 (559)
T 2q9o_A 184 VHFTQ-NN-APPFSDNVLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNA 259 (559)
T ss_dssp HHHHT-TS-CCCCBSEEEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred hhhhh-cC-CCCccceeEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCc
Confidence 54332 22 3446799999999753 353 2345799999999999999999999999999999999999999999999
Q ss_pred eEeceEEeCCCceEEEEEEeCCCCceeEEEeec--CCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCccccccc
Q 009392 252 FKTDNIVIAPGQTTNVLLSADKTSGKYLVAASP--FMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKF 329 (535)
Q Consensus 252 ~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~--~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~ 329 (535)
+.++++.|+|||||||+|++++++|+|||++.. ...+ ....+....|+|+|.++....+... ..+. .+.... .
T Consensus 260 ~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~-~~~~~~~~~ail~y~~~~~~~P~~~-~~~~-~~~~~~-~- 334 (559)
T 2q9o_A 260 MTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAAC-GGSLNPHPAAIFHYAGAPGGLPTDE-GTPP-VDHQCL-D- 334 (559)
T ss_dssp EEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTT-CCBSSSCCEEEEEETTSCCSCCCCC-CCCC-CCCTTC-C-
T ss_pred eEeCeEEEccEEEEEEEEECCCCCCcEEEEEEecccccc-CCCCCCceeEEEEECCCCCCCCCCC-CCcC-CCcccc-c-
Confidence 999999999999999999999878999999987 3222 2223445699999987654211111 1110 010000 0
Q ss_pred ccccccccCCCCCC-CCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccC-hhhHHHhhhcccCCccccCC
Q 009392 330 IDSLRSLNSKKYPA-KVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMP-TIALLQAHFFNISGVFTTDF 407 (535)
Q Consensus 330 ~~~l~~l~~~~~p~-~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p-~~~~l~~~~~~~~~~~~~~~ 407 (535)
...+.++.....|. ......+.++.+..... .+....|+|||++|..+ ..|+|...+.+. .++
T Consensus 335 ~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~----------~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~-----~~~ 399 (559)
T 2q9o_A 335 TLDVRPVVPRSVPVNSFVKRPDNTLPVALDLT----------GTPLFVWKVNGSDINVDWGKPIIDYILTGN-----TSY 399 (559)
T ss_dssp CSCCCBSSCCBCCCTTCCCCGGGEEEEEEECS----------SSSSCEEEETTBCCCCCTTSCHHHHHHHTC-----CCC
T ss_pred ccccccCCCCCCCCcccccceeEEEEEEeecC----------CCceEEEEECCEecccCCCCCcHhHhhcCC-----ccC
Confidence 01222221111111 01111234444443211 22356799999999754 557665544321 112
Q ss_pred CCCCCccccCCCCCCCCccCCCceeEEeeC-CCEEEEEEecCCC-CCCCCCCeeecCCCeEEEeecC---------CCCC
Q 009392 408 PGNPPHTYNFTGTPKNLQTSNGTKAYRLAY-NSTVQLILQDTGI-IAPENHPVHLHGFNFFAVGKGL---------GNFN 476 (535)
Q Consensus 408 ~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~-g~~v~~vl~N~~~-~~~~~HP~HlHG~~F~Vl~~g~---------g~~~ 476 (535)
+ .+..++.++. ++|++|+++|... ...+.||||||||+||||+++. |.|+
T Consensus 400 ~-------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~ 460 (559)
T 2q9o_A 400 P-------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFD 460 (559)
T ss_dssp C-------------------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCC
T ss_pred C-------------------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccC
Confidence 1 2345677764 6788889988531 0157899999999999999987 7776
Q ss_pred CCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCCCCCCeeeec------cCceeeee
Q 009392 477 PKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXXXXXAQIIQE------YGLCIAIW 528 (535)
Q Consensus 477 ~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adnPG~w~~HCH------~gm~~~~~ 528 (535)
+.++...+|+.+|+|||||.||++||++|||++||||.|+|||| .|||..|-
T Consensus 461 ~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~ 518 (559)
T 2q9o_A 461 PAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFL 518 (559)
T ss_dssp HHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEE
T ss_pred ccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEE
Confidence 54333568899999999999999999999999999999999999 89988763
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=2.8e-88 Score=723.14 Aligned_cols=443 Identities=26% Similarity=0.453 Sum_probs=346.9
Q ss_pred EEEEEEEEEEeeeccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCC-----CCceEEeCCcccCCCCCCCCCCCcc
Q 009392 24 RHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-----YNVTIHWHGVRQLRTGWADGPAYIT 98 (535)
Q Consensus 24 ~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-----~~t~iH~HG~~~~~~~~~DGvp~~t 98 (535)
.+|+|++++..+++||.++++|+|||++ ||+||+++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++|
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 4799999999999999999999999999 999999999999999999999 9999999999999999999999999
Q ss_pred cCcCCCCCeEEEEEEeCCCCcceeEecChhhhh-cccEEEEEEeCCCCC-CCCCCCCCceEEEEEEeeccCChHHHHHHH
Q 009392 99 QCPIQSGHSYVYNFTITGQRGTLLWHAHILWLR-ATVHGAIVILPKRGV-PYPFPKPHKEVVVVLAEWWKSDTEAVINQA 176 (535)
Q Consensus 99 q~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~iiV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 176 (535)
||+|+||++|+|+|++.+++||||||||.+.|+ +||+|+|||+++.+. ..+++..++|++|+++||+++...++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~--- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ--- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---
Confidence 999999999999999668999999999999998 899999999987642 222333346899999999998765421
Q ss_pred HhCCCCCCCCceEEEcCccCCCCCCCC-CCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEec
Q 009392 177 LQSGLAPNVSDSHTINGQPGPISSCSS-QGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTD 255 (535)
Q Consensus 177 ~~~g~~~~~~~~~liNG~~~~~~~~~~-~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d 255 (535)
+ ...+++++|||+.. +.|.. ...+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++
T Consensus 161 ---~--~~~~d~~liNG~~~--~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~ 233 (503)
T 1hfu_A 161 ---G--AAQPDATLINGKGR--YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVD 233 (503)
T ss_dssp --------CCSEEEETTBCC--BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred ---C--CCCCCEEEECcccc--cCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccC
Confidence 1 12578999999974 56653 3458999999999999999999999999999999999999999999999999
Q ss_pred eEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCc---ccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccc
Q 009392 256 NIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPI---AVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDS 332 (535)
Q Consensus 256 ~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~---~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 332 (535)
++.|+|||||||+|++++++|+|||++.+...+.. .+......|+|+|.++....+. .+..|... .. ....
T Consensus 234 ~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~-~~~~~~~~--~l---~~~~ 307 (503)
T 1hfu_A 234 RLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPT-TSANPNPA--QL---NEAD 307 (503)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCC-CCCCSSCC--BC---CGGG
T ss_pred eEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCC-CCCCCccC--CC---cccc
Confidence 99999999999999999878999999986533221 1222334799999986543211 11111100 00 0123
Q ss_pred cccccCCCCCC-CCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccc-cCCCCC
Q 009392 333 LRSLNSKKYPA-KVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFT-TDFPGN 410 (535)
Q Consensus 333 l~~l~~~~~p~-~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~-~~~~~~ 410 (535)
|+++.....|. ..+...+.++.+.++. ++. .|+|||++|..+..|+|.+.+.+ .+. .+
T Consensus 308 l~p~~~~~~p~~~~~~~~~~~~~l~~~~-----------~~~--~~~iNg~~~~~~~~P~l~~~~~g---~~~~~~---- 367 (503)
T 1hfu_A 308 LHALIDPAAPGIPTPGAADVNLRFQLGF-----------SGG--RFTINGTAYESPSVPTLLQIMSG---AQSAND---- 367 (503)
T ss_dssp CBBSSSCSCSSCSSTTCSSEEEECCEEE-----------ETT--EEEETTBCCCCCSSCHHHHHHTT---CCSGGG----
T ss_pred ccccCccCCCCcccCCcceEEEEEEeec-----------cCc--eEEECCCccCCCCCcchhhhhcC---Cccccc----
Confidence 44443222221 1122334444333221 222 58999999998877766654322 111 01
Q ss_pred CCccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCC
Q 009392 411 PPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPV 490 (535)
Q Consensus 411 ~p~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~ 490 (535)
.+.++.++.++.|++||+++.|.. ..+.||||||||+||||+++.+. .+|+.+|+
T Consensus 368 ---------------~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~~--------~~n~~~p~ 422 (503)
T 1hfu_A 368 ---------------LLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGSS--------TYNFVNPV 422 (503)
T ss_dssp ---------------SSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTCC--------CCCCSSBC
T ss_pred ---------------CCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCCC--------ccccCCCC
Confidence 123467889999999999999543 26799999999999999998542 35788999
Q ss_pred ccceEEe-CCCCEEEECCCCCCCCCCeeeec------cCceeeee
Q 009392 491 ERNTIGV-PSGGWVAIRXXXXXXXXAQIIQE------YGLCIAIW 528 (535)
Q Consensus 491 ~RDTv~v-p~~g~~virf~adnPG~w~~HCH------~gm~~~~~ 528 (535)
|||||.| |++||++|||++||||.|+|||| .|||..|.
T Consensus 423 ~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~ 467 (503)
T 1hfu_A 423 KRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFA 467 (503)
T ss_dssp EESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEE
T ss_pred eeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEE
Confidence 9999999 99999999999999999999999 89988764
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=8.4e-81 Score=655.48 Aligned_cols=392 Identities=21% Similarity=0.329 Sum_probs=313.6
Q ss_pred ceeEEEEEEEEEEeeeccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccC
Q 009392 21 CRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQC 100 (535)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~ 100 (535)
+.+++|+|++++..++++|.++.+|+|||++|||+|||++||+|+|+|+|+|+++|+|||||+++.+ ++||++ +
T Consensus 14 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~----~ 87 (439)
T 2xu9_A 14 GGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF----L 87 (439)
T ss_dssp TTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT----C
T ss_pred CCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc----c
Confidence 4678999999999999999999999999999999999999999999999999999999999999876 699987 4
Q ss_pred cCCCCCeEEEEEEeC-CCCcceeEecChhh----hh-cccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChH----
Q 009392 101 PIQSGHSYVYNFTIT-GQRGTLLWHAHILW----LR-ATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTE---- 170 (535)
Q Consensus 101 ~i~PG~~~~Y~~~~~-~~~Gt~wYH~H~~~----~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~---- 170 (535)
.|+||++|+|+|+++ +++||||||||.++ |. +||+|+|||+++.+.. +....++|++|+++||+++...
T Consensus 88 ~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~~~~~ 166 (439)
T 2xu9_A 88 EIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGRPAPH 166 (439)
T ss_dssp CBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTEECCC
T ss_pred cCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCCcCCC
Confidence 599999999999983 48999999999853 55 8999999999876422 1113578999999999887530
Q ss_pred HHHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCccc-
Q 009392 171 AVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYV- 249 (535)
Q Consensus 171 ~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v- 249 (535)
..... ..| ..++.++|||+.. |.++|++| +|||||||+|..+.+.|+|+||+|+||++||.++
T Consensus 167 ~~~~~--~~g---~~~~~~~iNG~~~----------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~ 230 (439)
T 2xu9_A 167 TPMDW--MNG---KEGDLVLVNGALR----------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLE 230 (439)
T ss_dssp CHHHH--HHC---CCCSEEEETTEES----------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEE
T ss_pred Ccccc--ccC---CCCCEEEECCccC----------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCC
Confidence 00011 112 2458999999975 89999999 9999999999999999999999999999999998
Q ss_pred ceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCcc--------------cCCCceEEEEEEcCCCCCCCCCCC
Q 009392 250 KPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIA--------------VDNVTATATLHYSGTLASSATTLT 315 (535)
Q Consensus 250 ~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~--------------~~~~~~~ail~Y~~~~~~~~~~~~ 315 (535)
+|+.++++.|+|||||||+|++++ +|+|+|+|.+...+... .......++++|.+..... .
T Consensus 231 ~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~-- 305 (439)
T 2xu9_A 231 EPLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPL--P-- 305 (439)
T ss_dssp EEEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCC--C--
T ss_pred CceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCccc--c--
Confidence 899999999999999999999998 89999999865433210 1123567899998754211 1
Q ss_pred CCCCCCCcccccccccccccccCCCCCCCCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhh
Q 009392 316 STPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAH 395 (535)
Q Consensus 316 ~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~ 395 (535)
.|. .+.++. +.+ .+ ..++++.|.++.. + ..|+|||++|..+.
T Consensus 306 -~p~------------~l~~~~--~l~--~~-~~~r~~~l~~~~~-----------g--~~~~iNg~~~~~~~------- 347 (439)
T 2xu9_A 306 -LPK------------ALSPFP--TLP--AP-VVTRRLVLTEDMM-----------A--ARFFINGQVFDHRR------- 347 (439)
T ss_dssp -CCS------------CCCCCC--CCC--CC-SEEEEEEEEEEGG-----------G--TEEEETTBCCCTTC-------
T ss_pred -Ccc------------cCCCcc--cCC--CC-CcceEEEEEeecc-----------C--ceEeECCEECCCCC-------
Confidence 110 011110 001 11 1246666655431 1 25899999884321
Q ss_pred hcccCCccccCCCCCCCccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCC
Q 009392 396 FFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNF 475 (535)
Q Consensus 396 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~ 475 (535)
..+.++.|++++|+|.|.+ .+.||||||||+||||+++.+.+
T Consensus 348 -----------------------------------~~~~~~~g~~~~~~~~N~~---~~~HP~HLHG~~F~Vl~~~g~~~ 389 (439)
T 2xu9_A 348 -----------------------------------VDLKGQAQTVEVWEVENQG---DMDHPFHLHVHPFQVLSVGGRPF 389 (439)
T ss_dssp -----------------------------------CCEEECTTCEEEEEEEECS---SSCEEEEESSCCBEEEEETTEEC
T ss_pred -----------------------------------CceecCCCCEEEEEEEcCC---CCCCCceeCCCcEEEEeeCCCCC
Confidence 1257889999999999975 67999999999999999985532
Q ss_pred CCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCCCCCCeeeec------cCceeee
Q 009392 476 NPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXXXXXAQIIQE------YGLCIAI 527 (535)
Q Consensus 476 ~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adnPG~w~~HCH------~gm~~~~ 527 (535)
.+|+|||||.||+++|++|||++||||.|+|||| .|||..+
T Consensus 390 -----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~ 436 (439)
T 2xu9_A 390 -----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVL 436 (439)
T ss_dssp -----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEE
T ss_pred -----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEE
Confidence 3799999999999999999999999999999999 8898765
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=1.1e-80 Score=655.38 Aligned_cols=396 Identities=16% Similarity=0.161 Sum_probs=309.4
Q ss_pred eeEEEEEEEEEEeeec-cCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccC
Q 009392 22 RVRHYKFNVVMKNSTK-LCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQC 100 (535)
Q Consensus 22 ~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~ 100 (535)
.+++|+|++++..+++ +|..+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++.+. +||+| ||
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~ 91 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---AR 91 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GG
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cC
Confidence 4688999999999998 799999999999999999999999999999999999999999999999987 99998 89
Q ss_pred cCCCCCeEEEEEEeCCCCcceeEecChh----hhh-cccEEEEEEeCCCCCCCCCCC--CCceEEEEEEeeccCChHHHH
Q 009392 101 PIQSGHSYVYNFTITGQRGTLLWHAHIL----WLR-ATVHGAIVILPKRGVPYPFPK--PHKEVVVVLAEWWKSDTEAVI 173 (535)
Q Consensus 101 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~----~~~-~Gl~G~iiV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 173 (535)
+|+||++|+|+|++++++||||||||.+ .|. +||+|+|||+++.+...+++. .++|++|+++||+++...++.
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE
T ss_pred cCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee
Confidence 9999999999999954599999999984 455 899999999998654333333 478999999999987543321
Q ss_pred HHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEE-cCceeEEEEeCCccc-ce
Q 009392 174 NQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKI-AGHKLTVVEVDATYV-KP 251 (535)
Q Consensus 174 ~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~v-~P 251 (535)
. ...+.....+++++|||+.. |.++|++| +|||||||+|..+.+.|+| +||+|+|||+||.++ +|
T Consensus 172 ~--~~~~~~~~~~d~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P 238 (451)
T 2uxt_A 172 Y--NEPGSGGFVGDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAP 238 (451)
T ss_dssp C--CCCSSSCCCCSEEEETTEES----------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEE
T ss_pred c--ccccCCCCcCCEEEECCccc----------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCc
Confidence 1 01112234679999999986 79999999 9999999999999999999 899999999999998 89
Q ss_pred eEeceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCc-------ccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcc
Q 009392 252 FKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPI-------AVDNVTATATLHYSGTLASSATTLTSTPPKNGTA 324 (535)
Q Consensus 252 ~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~-------~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~ 324 (535)
+.++++.|+|||||||+|++++ +|.|+|++.+...+.+ ..+.....++++|.......++ ....|
T Consensus 239 ~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-~~~~p------ 310 (451)
T 2uxt_A 239 VSVKQLSLAPGERREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-TDSLP------ 310 (451)
T ss_dssp EEESSEEECTTCEEEEEEECTT-CCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCC------
T ss_pred eEeceEEECceeEEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc-cccCc------
Confidence 9999999999999999999996 6899999886433211 0122345688999865432111 01111
Q ss_pred cccccccccccccCCCCCCCCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccc
Q 009392 325 IANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFT 404 (535)
Q Consensus 325 ~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~ 404 (535)
..|.++... + .+ .+.+..+.++ + .|+|||++|..++
T Consensus 311 ------~~L~~~~~~--~--~~--~~~~~~~~l~-------------~---~~~iNg~~f~~~~---------------- 346 (451)
T 2uxt_A 311 ------MRLLPTEIM--A--GS--PIRSRDISLG-------------D---DPGINGQLWDVNR---------------- 346 (451)
T ss_dssp ------SCSSSSCCC--C--CC--CSEEEEEEEC-------------S---SSSBTTBCCCTTC----------------
T ss_pred ------cccCCCCCC--C--CC--CcceEEEEEe-------------e---EEEECCEeCCCCC----------------
Confidence 112222111 1 12 2233333332 1 3789998874321
Q ss_pred cCCCCCCCccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCC
Q 009392 405 TDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKF 484 (535)
Q Consensus 405 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~ 484 (535)
..+.++.|++|+|+|.|. +.||||||||+||||+++ |. .+
T Consensus 347 --------------------------~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~-G~--------~~ 386 (451)
T 2uxt_A 347 --------------------------IDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVN-GA--------MP 386 (451)
T ss_dssp --------------------------CCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEET-TB--------CC
T ss_pred --------------------------CcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeC-Cc--------CC
Confidence 125789999999999994 589999999999999997 32 24
Q ss_pred CCCCCCccceEEeCCCCEEEECCCCCCCCC----Ceeeec------cCceeeeee
Q 009392 485 NLVDPVERNTIGVPSGGWVAIRXXXXXXXX----AQIIQE------YGLCIAIWK 529 (535)
Q Consensus 485 n~~~p~~RDTv~vp~~g~~virf~adnPG~----w~~HCH------~gm~~~~~~ 529 (535)
++.+|.|||||.| +++++|+|++||||. |+|||| .|||..+-.
T Consensus 387 ~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v 439 (451)
T 2uxt_A 387 FPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLV 439 (451)
T ss_dssp CGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEE
T ss_pred CcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEE
Confidence 6678999999999 899999999999988 999999 899988643
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=1.1e-78 Score=650.82 Aligned_cols=410 Identities=16% Similarity=0.192 Sum_probs=310.3
Q ss_pred eeEEEEEEEEEE--eeeccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCccc
Q 009392 22 RVRHYKFNVVMK--NSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQ 99 (535)
Q Consensus 22 ~~~~~~l~~~~~--~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq 99 (535)
.+++|+|++++. .+.+||..+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++.+. +||++ |
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~~---~ 109 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAA--FDGWA---E 109 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCTT--TTTCS---S
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCCC--CCCCC---C
Confidence 357899999964 4678899999999999999999999999999999999999999999999998765 99985 6
Q ss_pred CcCCCCCeEEEEEEeCCCCcceeEecChhhh----h-cccEEEEEEeCCCCCCCCCCC--CCceEEEEEEeeccCChHHH
Q 009392 100 CPIQSGHSYVYNFTITGQRGTLLWHAHILWL----R-ATVHGAIVILPKRGVPYPFPK--PHKEVVVVLAEWWKSDTEAV 172 (535)
Q Consensus 100 ~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~----~-~Gl~G~iiV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~ 172 (535)
|+|+||++|+|+|++.+++||||||||.+++ . +||+|+|||+++.+...+++. .+.|++|+++||++.....+
T Consensus 110 ~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~ 189 (534)
T 3abg_A 110 DITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNL 189 (534)
T ss_dssp SCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCB
T ss_pred CCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCce
Confidence 9999999999999985567999999999864 3 899999999998876555543 26789999999987654332
Q ss_pred HHHHHhCCC-CCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcC-------ceeEEEEe
Q 009392 173 INQALQSGL-APNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAG-------HKLTVVEV 244 (535)
Q Consensus 173 ~~~~~~~g~-~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~g-------h~~~via~ 244 (535)
.. ..+. ....++.++|||+.+ +.+.|++ ++|||||||+|..+.+.|+|++ |+|+|||+
T Consensus 190 ~~---~~~~~~~~~gd~~lvNG~~~----------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~ 255 (534)
T 3abg_A 190 VT---TNGELNSFWGDVIHVNGQPW----------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIAS 255 (534)
T ss_dssp CC---CTTCSSCCCCSEEEETTEES----------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEE
T ss_pred ec---cCCCCccccCceeccCCccC----------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEe
Confidence 11 1111 123578999999986 7888998 5999999999999999999987 99999999
Q ss_pred CCcc-cceeEeceEEeCCCceEEEEEEeCCCCc-eeEEEeecCCC-CCc-ccCCCceEEEEEEcCCCCCCCCCCCCCCCC
Q 009392 245 DATY-VKPFKTDNIVIAPGQTTNVLLSADKTSG-KYLVAASPFMD-API-AVDNVTATATLHYSGTLASSATTLTSTPPK 320 (535)
Q Consensus 245 DG~~-v~P~~~d~l~l~pGeR~dv~v~~~~~~g-~y~i~~~~~~~-~~~-~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~ 320 (535)
||++ .+|+.++++.|+|||||||+|++++.+| +|+|++..... +.. ..+.....++++|..+...+.......|
T Consensus 256 DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P-- 333 (534)
T 3abg_A 256 DSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP-- 333 (534)
T ss_dssp TTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC--
T ss_pred CCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc--
Confidence 9985 4899999999999999999999998677 69999854221 111 1112245689999764432110000011
Q ss_pred CCcccccccccccccccCCCCCCCCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccC
Q 009392 321 NGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNIS 400 (535)
Q Consensus 321 ~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~ 400 (535)
..|+++.. |. .+...++++.+ ... . ..|+|||++|..+..
T Consensus 334 ----------~~L~~~~~---p~-~~~~~~~~~~~--~~~----------~---~~w~iNG~~f~~~~~----------- 373 (534)
T 3abg_A 334 ----------ANLRDVPF---PS-PTTNTPRQFRF--GRT----------G---PTWTINGVAFADVQN----------- 373 (534)
T ss_dssp ----------CCCCCCSC---CC-CCCCCCEEEEC--SCC----------C---STTCCCCBTTBCTTS-----------
T ss_pred ----------cccccCCC---CC-CccccceEEEE--ecc----------C---ceeEECCcccCCCCC-----------
Confidence 11222211 11 11223443332 211 1 147899998853311
Q ss_pred CccccCCCCCCCccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCC
Q 009392 401 GVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKD 480 (535)
Q Consensus 401 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~ 480 (535)
|. .+.++.|++++|+|.|.+ ..+.||||||||+||||+++.|.+. .
T Consensus 374 -----------p~------------------l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~F~Vl~~~~g~~~--~- 419 (534)
T 3abg_A 374 -----------RL------------------LANVPVGTVERWELINAG--NGWTHPIHIHLVDFKVISRTSGNNA--R- 419 (534)
T ss_dssp -----------CC------------------CCEECTTCEEEEEEEECS--SSCCCCEEESSCCEEEEEESSCCSS--S-
T ss_pred -----------cc------------------eeeccCCCEEEEEEEcCC--CCCCcCEEECCeeEEEEEEcCCCCc--C-
Confidence 00 135778999999999964 2468999999999999999655432 1
Q ss_pred CCCCCCCCCCccceEEeCCCCEEEECCC-CCCCCCCeeeec------cCceeeee
Q 009392 481 PKKFNLVDPVERNTIGVPSGGWVAIRXX-XXXXXXAQIIQE------YGLCIAIW 528 (535)
Q Consensus 481 ~~~~n~~~p~~RDTv~vp~~g~~virf~-adnPG~w~~HCH------~gm~~~~~ 528 (535)
...++++ .|||||.|+++++++|||+ +||||.|+|||| .|||..+-
T Consensus 420 -~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~ 472 (534)
T 3abg_A 420 -TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFN 472 (534)
T ss_dssp -CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEE
T ss_pred -cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEE
Confidence 1245566 9999999999999999998 999999999999 88888753
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=8.3e-78 Score=643.81 Aligned_cols=423 Identities=17% Similarity=0.207 Sum_probs=310.2
Q ss_pred eEEEEEEEEEEeeec--cCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCC----------------------CceE
Q 009392 23 VRHYKFNVVMKNSTK--LCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKY----------------------NVTI 78 (535)
Q Consensus 23 ~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~----------------------~t~i 78 (535)
..+|+|++++..... ++..+.+|+|||++|||+|||++||+|+|+|+|+|++ +|+|
T Consensus 25 ~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsi 104 (513)
T 2wsd_A 25 KTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVV 104 (513)
T ss_dssp CEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCE
T ss_pred ceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEE
Confidence 455999999887664 5578999999999999999999999999999999975 9999
Q ss_pred EeCCcccCCCCCCCCCCC--cccCcCCCCCeE---EEEEEeCCCCcceeEecChhh----hh-cccEEEEEEeCCCCCCC
Q 009392 79 HWHGVRQLRTGWADGPAY--ITQCPIQSGHSY---VYNFTITGQRGTLLWHAHILW----LR-ATVHGAIVILPKRGVPY 148 (535)
Q Consensus 79 H~HG~~~~~~~~~DGvp~--~tq~~i~PG~~~---~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~iiV~~~~~~~~ 148 (535)
||||+++.+. +||+|+ ++||+|+||++| +|+|++++++||||||||.++ |. +||+|+|||+++.+...
T Consensus 105 HwHGl~~~~~--~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~ 182 (513)
T 2wsd_A 105 HLHGGVTPDD--SDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRL 182 (513)
T ss_dssp EEETCCCCGG--GSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGG
T ss_pred EcCCCcCCCc--cCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccc
Confidence 9999999854 999996 789999999555 999998568999999999975 44 89999999999876555
Q ss_pred CCCCCCceEEEEEEeeccCChHHHHHHHHh----------CCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEE
Q 009392 149 PFPKPHKEVVVVLAEWWKSDTEAVINQALQ----------SGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYM 218 (535)
Q Consensus 149 ~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~----------~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~r 218 (535)
+++..++|++|+++||+++...++...... .......+++++|||+.+ +.++|++| +||
T Consensus 183 ~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~~-~~R 251 (513)
T 2wsd_A 183 KLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEPR-KYR 251 (513)
T ss_dssp CCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCSS-EEE
T ss_pred cCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecCC-EEE
Confidence 555678999999999987654332111000 001123578999999986 78999985 899
Q ss_pred EEEEEcCCCceEEEEEcCc-eeEEEEeCCccc-ceeEeceEEeCCCceEEEEEEeCCCCcee-EEEeecCCCCCcccCCC
Q 009392 219 LRIINAALNEELFFKIAGH-KLTVVEVDATYV-KPFKTDNIVIAPGQTTNVLLSADKTSGKY-LVAASPFMDAPIAVDNV 295 (535)
Q Consensus 219 lRliN~~~~~~~~~~i~gh-~~~via~DG~~v-~P~~~d~l~l~pGeR~dv~v~~~~~~g~y-~i~~~~~~~~~~~~~~~ 295 (535)
|||||+|..+.+.|+|++| +|+|||+||.++ +|+.++++.|+|||||||+|++++.+|++ .++... .+...+...
T Consensus 252 lRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~--~~~~~~~~~ 329 (513)
T 2wsd_A 252 FRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSA--GCGGDVNPE 329 (513)
T ss_dssp EEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECC--CSSSSCCTT
T ss_pred EEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecc--cccccCCCC
Confidence 9999999999999999999 999999999998 89999999999999999999999867863 333322 221112223
Q ss_pred ceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCccceEEEEEeecCcCCCCCccCCCCCee
Q 009392 296 TATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRV 375 (535)
Q Consensus 296 ~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~ 375 (535)
...++|+|..+.....+.....|. .|..+.. .+. .+...++++.+....+. .+ ..
T Consensus 330 ~~~~il~~~~~~~~~~~~~~~~p~------------~l~~~~~--~~~-~~~~~~~~~~l~~~~~~---------~g-~~ 384 (513)
T 2wsd_A 330 TDANIMQFRVTKPLAQKDESRKPK------------YLASYPS--VQH-ERIQNIRTLKLAGTQDE---------YG-RP 384 (513)
T ss_dssp TTTEEEEEECCSCCSSCCCCCCCS------------BCSCCGG--GCC-CCEEEEEEEEEEEEECT---------TS-CE
T ss_pred CCcceEEEEeccCcccCccCCCCc------------cccCCCC--ccc-CCCcceEEEEEEeecCC---------CC-Cc
Confidence 456889997654211111111111 0111100 011 11123455555443321 22 34
Q ss_pred EEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCC
Q 009392 376 VASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPEN 455 (535)
Q Consensus 376 ~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~ 455 (535)
.|.|||++|..|. .+.++.|++|+|+|.|.+ .+.
T Consensus 385 ~~~iNg~~~~~~~-------------------------------------------~~~~~~g~~~~w~l~N~~---~~~ 418 (513)
T 2wsd_A 385 VLLLNNKRWHDPV-------------------------------------------TETPKVGTTEIWSIINPT---RGT 418 (513)
T ss_dssp EEEETTBCTTSCC-------------------------------------------CBCCBTTCEEEEEEEECS---SSC
T ss_pred eEeECCccCCCcc-------------------------------------------cEecCCCCEEEEEEEcCC---CCC
Confidence 5789998874220 124678999999999965 579
Q ss_pred CCeeecCCCeEEEeecCC---CCCCCC------CCCCCCCCCCCccceEEeCCCCEEEECCCC-CCCCCCeeeec-----
Q 009392 456 HPVHLHGFNFFAVGKGLG---NFNPKK------DPKKFNLVDPVERNTIGVPSGGWVAIRXXX-XXXXXAQIIQE----- 520 (535)
Q Consensus 456 HP~HlHG~~F~Vl~~g~g---~~~~~~------~~~~~n~~~p~~RDTv~vp~~g~~virf~a-dnPG~w~~HCH----- 520 (535)
||||||||+||||+++.+ .|++.. .+...+..++.|||||.|+++++++|+|++ ||||.|+||||
T Consensus 419 HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~ 498 (513)
T 2wsd_A 419 HPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHE 498 (513)
T ss_dssp EEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHH
T ss_pred cCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhh
Confidence 999999999999999742 222110 001112234569999999999998877776 89999999999
Q ss_pred -cCceeeeeecc
Q 009392 521 -YGLCIAIWKYT 531 (535)
Q Consensus 521 -~gm~~~~~~~~ 531 (535)
.|||..+-...
T Consensus 499 ~~GMm~~~~V~~ 510 (513)
T 2wsd_A 499 DYDMMRPMDITD 510 (513)
T ss_dssp TTTCEEEEEEBC
T ss_pred hcCCceeEEEeC
Confidence 89998876543
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3.7e-76 Score=620.82 Aligned_cols=406 Identities=19% Similarity=0.258 Sum_probs=302.3
Q ss_pred ccceeEEEEEEEEEEeeec-cCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCc
Q 009392 19 VECRVRHYKFNVVMKNSTK-LCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYI 97 (535)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~ 97 (535)
..+.+++|+|++++..+++ +|..+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++++ ++||+|
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc--
Confidence 4578999999999999996 69999999999999999999999999999999999999999999999864 599996
Q ss_pred ccCcCCCCCeEEEEEEeCCC-CcceeEecChh----hhh-cccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHH
Q 009392 98 TQCPIQSGHSYVYNFTITGQ-RGTLLWHAHIL----WLR-ATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEA 171 (535)
Q Consensus 98 tq~~i~PG~~~~Y~~~~~~~-~Gt~wYH~H~~----~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 171 (535)
||+|+||++|+|+|+++++ +||||||||.+ .|. +||+|+|||+++++...++ +.++ |+++||+++...+
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 8999999999999999433 79999999974 455 8999999999987654332 3344 9999998875432
Q ss_pred HH----HHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCc
Q 009392 172 VI----NQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDAT 247 (535)
Q Consensus 172 ~~----~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 247 (535)
+. ... ..| ..++.++|||+.. |.++|++|+ ||||||+|..+.+.|+|++|+|+|||+||+
T Consensus 197 ~~~~~~~~~-~~g---~~gd~~lvNG~~~----------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg 260 (481)
T 3zx1_A 197 IPNNNLNDW-LNG---REGEFVLINGQFK----------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGG 260 (481)
T ss_dssp CCCCCHHHH-HHC---CCCSEEEETTEES----------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTE
T ss_pred cccccchhh-ccC---CcCCEEEECCccC----------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCC
Confidence 21 011 112 2468999999976 799999998 999999999999999999999999999988
Q ss_pred cc-ceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCccc-CCCceEEEEEEcCCCCCCCCCCCCCCCCCCccc
Q 009392 248 YV-KPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAV-DNVTATATLHYSGTLASSATTLTSTPPKNGTAI 325 (535)
Q Consensus 248 ~v-~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~-~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~ 325 (535)
++ +|+.++++.|+|||||||+|++++ ++.|.|.+.......... .......+++....... . ..|.
T Consensus 261 ~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~---~lP~------ 328 (481)
T 3zx1_A 261 LIEKTIYKEELFLSPASRVEVLIDAPK-DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN--V---ELPK------ 328 (481)
T ss_dssp EEEEEEEESSEEECTTCEEEEEEECSS-CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC--C---CCCS------
T ss_pred ccCCceEeCeEEECCccEEEEEEEcCC-CcEEEEEEecccccCccccCCCCceeEEEEecCCCC--c---cCCc------
Confidence 76 899999999999999999999996 689999886543311111 11223344443321111 0 1111
Q ss_pred ccccccccccccCCCCCCCCCCccceEEEEEeecCcCCCCCccCCCCCe-------eEEEEcCcccccChhhHHHhhhcc
Q 009392 326 ANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSR-------VVASINNVTFVMPTIALLQAHFFN 398 (535)
Q Consensus 326 ~~~~~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~-------~~~~iN~~~~~~p~~~~l~~~~~~ 398 (535)
.|.++. .. ..+ +++..+.++........... .+.. ..|+|||+.|...
T Consensus 329 ------~l~~~~--~~--~~~---~~~r~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~iNG~~~~~~----------- 383 (481)
T 3zx1_A 329 ------NLKIFK--PS--EEP---KEFKEIIMSEDHMQMHGMMG-KSEGELKIALASMFLINRKSYDLK----------- 383 (481)
T ss_dssp ------CSCCCC--CC--CCC---CEEEEEEEEECCSTTTTGGG-CCHHHHHHHHHTTEEETTBCCCTT-----------
T ss_pred ------cccCCC--CC--CCC---CcEEEEEEeccchhcccccc-cccccccccccceeEECCEeCCCC-----------
Confidence 111111 00 111 23333444332110000000 0000 1388898766311
Q ss_pred cCCccccCCCCCCCccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeec-CCCCCC
Q 009392 399 ISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKG-LGNFNP 477 (535)
Q Consensus 399 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g-~g~~~~ 477 (535)
...+.++.|++|+|+|.|.+ .+.||||||||.|||++++ .|.
T Consensus 384 -------------------------------~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~vl~~~~~g~--- 426 (481)
T 3zx1_A 384 -------------------------------RIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFELISSKLNGK--- 426 (481)
T ss_dssp -------------------------------CCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEEEEEEETTE---
T ss_pred -------------------------------CceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEEEEecccCC---
Confidence 12357899999999999964 6799999999999999983 121
Q ss_pred CCCCCCCCCCCCCccceEEeCCCCEEEECCCCCCCCCCeeeec------cCceeeee
Q 009392 478 KKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXXXXXAQIIQE------YGLCIAIW 528 (535)
Q Consensus 478 ~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adnPG~w~~HCH------~gm~~~~~ 528 (535)
.....++.|||||.|+++++++|+|++||||.|+|||| .|||..+-
T Consensus 427 -----~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~ 478 (481)
T 3zx1_A 427 -----VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLE 478 (481)
T ss_dssp -----EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEE
T ss_pred -----CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEE
Confidence 12234689999999999999999999999999999999 89998764
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=3.2e-76 Score=620.39 Aligned_cols=384 Identities=18% Similarity=0.286 Sum_probs=295.2
Q ss_pred eEEEEEEEEEEeeeccCCceeEEEECCC-CCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCc
Q 009392 23 VRHYKFNVVMKNSTKLCSSKPIVTVNRK-FPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCP 101 (535)
Q Consensus 23 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~-~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~ 101 (535)
.++|+|++ |+|||+ +|||+||+++||+|+|+|+|+|+++|+|||||+++++ ++||+|+ |+
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~ 80 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FA 80 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GC
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---cc
Confidence 56777777 999999 9999999999999999999999999999999999975 4999998 99
Q ss_pred CCCCCeEEEEEEeCCCCcceeEecC----hhhhh-cccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHHHHH--
Q 009392 102 IQSGHSYVYNFTITGQRGTLLWHAH----ILWLR-ATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVIN-- 174 (535)
Q Consensus 102 i~PG~~~~Y~~~~~~~~Gt~wYH~H----~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~-- 174 (535)
|+||++|+|+|++++++|||||||| ...|. +||+|+|||+++++. .+++...+|++|+++||+++. .++..
T Consensus 81 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~~~ 158 (448)
T 3aw5_A 81 ITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVYNP 158 (448)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEECCC
T ss_pred CCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-Ccccccc
Confidence 9999999999999558999999999 55666 999999999998765 333222389999999998876 33211
Q ss_pred --HHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEE--cC---ceeEEEEeCCc
Q 009392 175 --QALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKI--AG---HKLTVVEVDAT 247 (535)
Q Consensus 175 --~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i--~g---h~~~via~DG~ 247 (535)
.....| ..+++++|||+.. +.++|++| +|||||||+|..+.+.|+| ++ |+|+|||+||+
T Consensus 159 ~~~~~~~~---~~~~~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~ 224 (448)
T 3aw5_A 159 TPMEMIAG---FLGNAVLVNGVKD----------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQG 224 (448)
T ss_dssp CHHHHHHC---CCCSEEEETTEET----------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTE
T ss_pred cccccccC---ccccEEEECCccc----------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCC
Confidence 001112 3568999999986 89999999 9999999999999999999 99 99999999999
Q ss_pred ccc-eeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCcc----------cCCCceEEEEEEcCCCCCCCCCCCC
Q 009392 248 YVK-PFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIA----------VDNVTATATLHYSGTLASSATTLTS 316 (535)
Q Consensus 248 ~v~-P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~----------~~~~~~~ail~Y~~~~~~~~~~~~~ 316 (535)
+++ |+.++++.|+|||||||+|++++ +.|+|++.+...+.+. .......++++|.++.....
T Consensus 225 ~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 297 (448)
T 3aw5_A 225 FLARPIEVRALFLAPAERAEVVVELGE--GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP----- 297 (448)
T ss_dssp EEEEEEEESCEEECTTCEEEEEEEECS--EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC-----
T ss_pred ccCCceEeceEEECCcceEEEEEECCC--CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC-----
Confidence 997 99999999999999999999983 7999999875543211 11234577888876433211
Q ss_pred CCCCCCcccccccccccccccCCCCCCCCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhh
Q 009392 317 TPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHF 396 (535)
Q Consensus 317 ~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~ 396 (535)
|. .|..+... ..+...++++.+..+ ...|+|||++|..+.
T Consensus 298 -p~------------~L~~lp~~----~~~~~~~~~~~l~~~---------------~~~~~iNg~~~~~~~-------- 337 (448)
T 3aw5_A 298 -VE------------ALSDPPPE----PPKPTRTRRFALSLS---------------GMQWTINGMFWNASN-------- 337 (448)
T ss_dssp -CC------------CCSCCCCC----CCCCSEEEEEEEEEE---------------TTEEEETTBCCCTTC--------
T ss_pred -cc------------ccCCCCCC----CCCCCceEEEEEeCC---------------CceeeECCCcCCCCC--------
Confidence 10 01111100 122334555555432 124999999885321
Q ss_pred cccCCccccCCCCCCCccccCCCCCCCCccCCCceeEE-eeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCC
Q 009392 397 FNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYR-LAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNF 475 (535)
Q Consensus 397 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~ 475 (535)
| .+. ++.|++|+|+|.|.+ ..+.||||||||+||||+++ |.+
T Consensus 338 ---------------p-------------------~~~~~~~g~~v~~~i~N~~--~~~~HP~HLHG~~F~Vl~~~-G~~ 380 (448)
T 3aw5_A 338 ---------------P-------------------LFEHVSVEGVELWEIVNDK--ASMPHPMHLHGFPMWIIERK-DSP 380 (448)
T ss_dssp ---------------T-------------------TCCCEEECEEEEEEEEECS--SSCCEEEEESSSCBEEEEEE-SCC
T ss_pred ---------------C-------------------ceeccCCCCeEEEEEEcCC--CCCCcCEEECCceEEEEEec-CCC
Confidence 0 124 678999999999964 25789999999999999996 554
Q ss_pred CCCCCCC----CCCCCCCCccceEEeCCCCEEEEC--CC---CCCCCCCeeeec------cCceeee
Q 009392 476 NPKKDPK----KFNLVDPVERNTIGVPSGGWVAIR--XX---XXXXXXAQIIQE------YGLCIAI 527 (535)
Q Consensus 476 ~~~~~~~----~~n~~~p~~RDTv~vp~~g~~vir--f~---adnPG~w~~HCH------~gm~~~~ 527 (535)
....... ..+..+|.|||||.|+++++++|+ |+ +||| |+|||| .|||..+
T Consensus 381 ~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~ 445 (448)
T 3aw5_A 381 RQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINI 445 (448)
T ss_dssp HHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEE
T ss_pred cccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEE
Confidence 3111111 123445689999999999999655 99 9999 999999 8998875
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=4.6e-75 Score=639.70 Aligned_cols=455 Identities=16% Similarity=0.194 Sum_probs=297.1
Q ss_pred ceeEEEEEEEEEEeee--ccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCC-----------------------
Q 009392 21 CRVRHYKFNVVMKNST--KLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYN----------------------- 75 (535)
Q Consensus 21 ~~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~----------------------- 75 (535)
...+.|+|++++.... +++..+.+|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 3567889988887665 466788999999999999999999999999999999654
Q ss_pred ------------------ceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecChhh----hh-c
Q 009392 76 ------------------VTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILW----LR-A 132 (535)
Q Consensus 76 ------------------t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~ 132 (535)
|+|||||+++.+. +||+| ||+|+||++|+|+|++++++||||||||.++ |+ +
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~~--~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccCCc--ccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 6789999988654 89875 8999999999999999667899999999854 55 8
Q ss_pred ccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHHHHHHHH-------------hCC---CCCCCCceEEEcCccC
Q 009392 133 TVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQAL-------------QSG---LAPNVSDSHTINGQPG 196 (535)
Q Consensus 133 Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~-------------~~g---~~~~~~~~~liNG~~~ 196 (535)
||+|+|||+++.+..++++.+++|++|+|+||+++...+...... ..+ .....++.++|||+..
T Consensus 185 Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~ 264 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc
Confidence 999999999988776667678999999999998754322110000 000 1123568899999976
Q ss_pred CCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCc-------eeEEEEeCCccc-ceeEe------ceEEeCCC
Q 009392 197 PISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGH-------KLTVVEVDATYV-KPFKT------DNIVIAPG 262 (535)
Q Consensus 197 ~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~v-~P~~~------d~l~l~pG 262 (535)
+.+.++. ++|||||||+|..+.+.|+|++| +|+|||+||+++ +|+.+ +.|.|+||
T Consensus 265 ----------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pG 333 (612)
T 3gyr_A 265 ----------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ----------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ----------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccc
Confidence 7888876 58999999999999999999998 599999999998 56655 48999999
Q ss_pred ceEEEEEEeCCCCceeEEEeecCCCCCc----ccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccC
Q 009392 263 QTTNVLLSADKTSGKYLVAASPFMDAPI----AVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNS 338 (535)
Q Consensus 263 eR~dv~v~~~~~~g~y~i~~~~~~~~~~----~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~ 338 (535)
|||||+|++++.+|.++........... ........++++|.......... ...|...... ....
T Consensus 334 eRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~--------~~~~-- 402 (612)
T 3gyr_A 334 ERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDS-FALPEVLSGS--------FRRM-- 402 (612)
T ss_dssp CEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCC-CCCCSSCCSS--------CCCC--
T ss_pred eEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCc-cccccccccc--------cccc--
Confidence 9999999999877755544332221111 11223445677776433321110 0111100000 0000
Q ss_pred CCCCCCCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccC-hhhHHHhhhcccCCccccCCCCCCCccccC
Q 009392 339 KKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMP-TIALLQAHFFNISGVFTTDFPGNPPHTYNF 417 (535)
Q Consensus 339 ~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p-~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~ 417 (535)
...++. ..+...+.. .... ........+.++....... ..+.. ........+..+..+..
T Consensus 403 ---~~~~~~-~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 463 (612)
T 3gyr_A 403 ---SHDIPH-GHRLIVLTP-PGTK------GSGGHPEIWEMAEVEDPADVQVPAE--------GVIQVTGADGRTKTYRR 463 (612)
T ss_dssp ---CTTSCC-EEEEEEEEC-TTCT------TTTTCCEEEEEEECC-----CCSCT--------TEEEEECTTSCEEEEEE
T ss_pred ---cccccc-ccccccccc-cccc------ccccccccccccccccccccccccc--------ceeeeccCCCccccccc
Confidence 000000 000000000 0000 0000011111111000000 00000 00000000000000000
Q ss_pred CCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCC---------------CCC
Q 009392 418 TGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKK---------------DPK 482 (535)
Q Consensus 418 ~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~---------------~~~ 482 (535)
+.....+...+.++.|++|+|+|.|.+ .+.||||||||+||||+++.+.++... ...
T Consensus 464 -----n~~~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (612)
T 3gyr_A 464 -----TARTFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPV 535 (612)
T ss_dssp -----EECSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEEC
T ss_pred -----cCccCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCcccccccccccccccccccccc
Confidence 000112234578999999999999975 679999999999999998644332110 112
Q ss_pred CCCCCCCCccceEEeCCCCEEEECCC-CCCCCCCeeeec------cCceeeeee
Q 009392 483 KFNLVDPVERNTIGVPSGGWVAIRXX-XXXXXXAQIIQE------YGLCIAIWK 529 (535)
Q Consensus 483 ~~n~~~p~~RDTv~vp~~g~~virf~-adnPG~w~~HCH------~gm~~~~~~ 529 (535)
..+..++.|||||.||+++|++|||+ +||||.|+|||| .|||..+-.
T Consensus 536 ~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V 589 (612)
T 3gyr_A 536 PLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVV 589 (612)
T ss_dssp CCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEE
T ss_pred CcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEE
Confidence 45677899999999999999999998 899999999999 899987654
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=9.2e-74 Score=602.20 Aligned_cols=417 Identities=17% Similarity=0.214 Sum_probs=299.3
Q ss_pred ceeEEEEEEEEEEeeeccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccC
Q 009392 21 CRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQC 100 (535)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~ 100 (535)
...+.|+|++++..++++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++.+. +||+| ||
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~~ 89 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QG 89 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---TC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---cC
Confidence 35678999999999999999999999999999999999999999999999999999999999999764 99997 79
Q ss_pred cCCCCCeEEEEEEeCCCCcceeEecChhh----hh-cccEEEEEEeCCCCCCCCCCC--CCceEEEEEEeeccCChHHHH
Q 009392 101 PIQSGHSYVYNFTITGQRGTLLWHAHILW----LR-ATVHGAIVILPKRGVPYPFPK--PHKEVVVVLAEWWKSDTEAVI 173 (535)
Q Consensus 101 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~iiV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 173 (535)
+|+||++|+|+|++++++||||||||.++ |. +||+|+|||+++.+...+++. ..+|++|+++||+++...++.
T Consensus 90 ~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~ 169 (488)
T 3od3_A 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQID 169 (488)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBC
T ss_pred cCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCcee
Confidence 99999999999999555899999999853 54 899999999998754433332 346999999999886543211
Q ss_pred HH--HHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEE-cCceeEEEEeCCccc-
Q 009392 174 NQ--ALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKI-AGHKLTVVEVDATYV- 249 (535)
Q Consensus 174 ~~--~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~v- 249 (535)
.. .... .....++.++|||+.. |.+.+ +|++|||||||+|..+.+.|+| +||+|+|||+||+++
T Consensus 170 ~~~~~~~~-~~g~~gd~~lvNG~~~----------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~ 237 (488)
T 3od3_A 170 YQLDVMTA-AVGWFGDTLLTNGAIY----------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLP 237 (488)
T ss_dssp CCCSHHHH-HHCCCCSEEEETTBSS----------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEE
T ss_pred cccccccc-ccCCCCCEEEEcCCcC----------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCccc
Confidence 00 0000 0113568999999975 66666 5689999999999999999999 699999999999987
Q ss_pred ceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCccc-CCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccc
Q 009392 250 KPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAV-DNVTATATLHYSGTLASSATTLTSTPPKNGTAIANK 328 (535)
Q Consensus 250 ~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~-~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~ 328 (535)
+|+.+++|.|+|||||||+|++++ .+.|.|++.+........ .......+++......... ...|.
T Consensus 238 ~P~~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~P~--------- 304 (488)
T 3od3_A 238 EPVKVSELPVLMGERFEVLVEVND-NKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISAS---GALPD--------- 304 (488)
T ss_dssp EEEEESCEEECTTCEEEEEEEECT-TCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECC---CCCCS---------
T ss_pred CccEeceEEECCCCEEEEEEEeCC-CceEEEEEeccCCCCcccccccCccceeEecccccCCC---CCCCc---------
Confidence 899999999999999999999996 678999886543221100 0111222333221110000 01110
Q ss_pred cccccccccCCCCCCCCCCccceEEEEEeecC--------------cCCCCCc----------cC-----CCCCee----
Q 009392 329 FIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLG--------------VNPCPSC----------KA-----GNGSRV---- 375 (535)
Q Consensus 329 ~~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~--------------~~~~~~~----------~~-----~~g~~~---- 375 (535)
.|..+ +..| .++...++++.|.+... ....... .+ ..|..+
T Consensus 305 ---~L~~~--~~~~-~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~ 378 (488)
T 3od3_A 305 ---TLSSL--PALP-SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHH 378 (488)
T ss_dssp ---CCCCC--CCCC-CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGG
T ss_pred ---ccccC--CCCc-ccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccc
Confidence 01111 0001 01112345555544210 0000000 00 001111
Q ss_pred EEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCC
Q 009392 376 VASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPEN 455 (535)
Q Consensus 376 ~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~ 455 (535)
.|.|||++|... ...+.++.|++|+|.|.|.+ +.+.
T Consensus 379 ~~~ING~~~~~~------------------------------------------~~~~~~~~G~~e~w~l~N~~--~~~~ 414 (488)
T 3od3_A 379 ANKINGQAFDMN------------------------------------------KPMFAAAKGQYERWVISGVG--DMML 414 (488)
T ss_dssp CEEETTBCCCTT------------------------------------------CCSEECCBSSCEEEEEECTT--CCCC
T ss_pred eeeECCeeCCCC------------------------------------------CCceEcCCCCEEEEEEEeCC--CCCC
Confidence 378999877321 11257889999999999975 2468
Q ss_pred CCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCC----CCCCCCeeeec------cCcee
Q 009392 456 HPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXX----XXXXXAQIIQE------YGLCI 525 (535)
Q Consensus 456 HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~a----dnPG~w~~HCH------~gm~~ 525 (535)
|||||||++|+|++++... ....++.|||||.|+ ++++.|+|++ ++||.|+|||| .|||.
T Consensus 415 Hp~HlHg~~F~Vl~~~g~~---------~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~ 484 (488)
T 3od3_A 415 HPFHIHGTQFRILSENGKP---------PAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMML 484 (488)
T ss_dssp EEEEETTCCBEEEEBTTBC---------CCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEE
T ss_pred ccEEEcCceEEEeccCCCc---------cccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcE
Confidence 9999999999999996332 122357899999999 9999888886 45689999999 89998
Q ss_pred ee
Q 009392 526 AI 527 (535)
Q Consensus 526 ~~ 527 (535)
.+
T Consensus 485 ~f 486 (488)
T 3od3_A 485 GF 486 (488)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=4.5e-72 Score=603.72 Aligned_cols=431 Identities=15% Similarity=0.190 Sum_probs=306.9
Q ss_pred ceeEEEEEEEEEEeeec--cCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCC-----------------------
Q 009392 21 CRVRHYKFNVVMKNSTK--LCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYN----------------------- 75 (535)
Q Consensus 21 ~~~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~----------------------- 75 (535)
...++|+|++++..... ++..+.+|+|||++|||+|+|++||+|+|+|+|+|++.
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 34688999999988764 45689999999999999999999999999999999753
Q ss_pred ------------------ceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecChhh----hh-c
Q 009392 76 ------------------VTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILW----LR-A 132 (535)
Q Consensus 76 ------------------t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~ 132 (535)
|+|||||+++.+. +||+| ||+|+||++|+|+|++.+++||||||||.++ |. +
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 8999999999876 99986 7999999999999998558999999999976 55 9
Q ss_pred ccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHH-HHH-HH------Hh----CCCC----CCCCceEEEcCccC
Q 009392 133 TVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEA-VIN-QA------LQ----SGLA----PNVSDSHTINGQPG 196 (535)
Q Consensus 133 Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-~~~-~~------~~----~g~~----~~~~~~~liNG~~~ 196 (535)
||+|+|||+++.+...+++.+++|++|+++||+++.... .+. +. .. .++. +..++.++|||+.+
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~ 264 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC
Confidence 999999999987655556668999999999999864321 000 00 00 1111 14579999999986
Q ss_pred CCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCc-------eeEEEEeCCccc-ceeEec------eEEeCCC
Q 009392 197 PISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGH-------KLTVVEVDATYV-KPFKTD------NIVIAPG 262 (535)
Q Consensus 197 ~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~v-~P~~~d------~l~l~pG 262 (535)
+.++|++| +|||||||+|..+.+.|+|++| +|+|||+||+++ +|+.++ +|.|+||
T Consensus 265 ----------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pg 333 (612)
T 2g23_A 265 ----------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ----------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ----------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCc
Confidence 89999999 9999999999999999999999 899999999999 699999 9999999
Q ss_pred ceEEEEEEeCCCCc-eeEEEeecCCCCCccc---CCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccC
Q 009392 263 QTTNVLLSADKTSG-KYLVAASPFMDAPIAV---DNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNS 338 (535)
Q Consensus 263 eR~dv~v~~~~~~g-~y~i~~~~~~~~~~~~---~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~ 338 (535)
|||||+|++++.+| +|+|+........+.. .......++++.-....... ...+|.. |... .
T Consensus 334 eR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~-~~~~P~~------------L~~~-~ 399 (612)
T 2g23_A 334 ERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEED-SFALPEV------------LSGS-F 399 (612)
T ss_dssp CEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCC-CCCCCSS------------CCSS-C
T ss_pred CeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCC-CCCCChh------------hccc-c
Confidence 99999999998777 6888876421111100 01111245555432211000 0011110 0000 0
Q ss_pred CCCCCCCCCccceEEEE---------------Eeec-C-cC--CCC-----CccCCCCCeeEEEEcCcccccChhhHHHh
Q 009392 339 KKYPAKVPQTVDHNLLF---------------TVGL-G-VN--PCP-----SCKAGNGSRVVASINNVTFVMPTIALLQA 394 (535)
Q Consensus 339 ~~~p~~~p~~~~~~~~l---------------~~~~-~-~~--~~~-----~~~~~~g~~~~~~iN~~~~~~p~~~~l~~ 394 (535)
+..+..++. ..+.+.+ .+.. . .. ..+ .....+|....|.|||+.|..
T Consensus 400 ~~l~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~-------- 470 (612)
T 2g23_A 400 RRMSHDIPH-GHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFND-------- 470 (612)
T ss_dssp CCCCTTSCC-EEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTS--------
T ss_pred ccCCccccc-ceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCC--------
Confidence 000000000 0011111 0000 0 00 000 000113444456777776521
Q ss_pred hhcccCCccccCCCCCCCccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCC
Q 009392 395 HFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGN 474 (535)
Q Consensus 395 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~ 474 (535)
...+.++.|++|+|.|.|.+ .+.||||||||+||||+++.+.
T Consensus 471 -----------------------------------~~~~~v~~G~~v~w~l~N~~---~~~HPiHlHg~~F~Vl~r~~~~ 512 (612)
T 2g23_A 471 -----------------------------------GLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYD 512 (612)
T ss_dssp -----------------------------------CCCEEEETTCEEEEEEEECS---SSCEEEEESSCCEEEEEEEEEE
T ss_pred -----------------------------------CCceEecCCCEEEEEEEeCC---CCCCCeEEcCceEEEecccCcc
Confidence 12368899999999999975 6799999999999999986432
Q ss_pred CC---CCCC------------CCCCCCCCCCccceEEeCCCCEEEECCCCC-CCCCCeeeec------cCceeeee
Q 009392 475 FN---PKKD------------PKKFNLVDPVERNTIGVPSGGWVAIRXXXX-XXXXAQIIQE------YGLCIAIW 528 (535)
Q Consensus 475 ~~---~~~~------------~~~~n~~~p~~RDTv~vp~~g~~virf~ad-nPG~w~~HCH------~gm~~~~~ 528 (535)
++ .... ....+..++.|||||.|+++++++|+|++| |||.|+|||| .|||..+-
T Consensus 513 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~ 588 (612)
T 2g23_A 513 ASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFV 588 (612)
T ss_dssp CTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEE
T ss_pred cccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEE
Confidence 21 1100 023556678899999999999999999999 9999999999 89998764
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.2e-54 Score=436.42 Aligned_cols=271 Identities=25% Similarity=0.373 Sum_probs=226.5
Q ss_pred eeEEEEEEEEEEeeec-cCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccC
Q 009392 22 RVRHYKFNVVMKNSTK-LCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQC 100 (535)
Q Consensus 22 ~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~ 100 (535)
++|+|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++.++.++||+|++|||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4899999999999887 578899999999999999999999999999999999999999999999988889999999999
Q ss_pred cCCCCCeEEEEEEeCCCCcceeEecChhhhh----cccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHHHHHHH
Q 009392 101 PIQSGHSYVYNFTITGQRGTLLWHAHILWLR----ATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQA 176 (535)
Q Consensus 101 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~----~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 176 (535)
+|+||++++|+|++ +++||||||||...+. +||+|+|||++++....+. ..++|++|+++||++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~----~ 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANK----P 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTC----T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeeccccccc----c
Confidence 99999999999998 7999999999987653 7999999999876532111 35889999999998753211 0
Q ss_pred HhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCccc-ceeEec
Q 009392 177 LQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYV-KPFKTD 255 (535)
Q Consensus 177 ~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v-~P~~~d 255 (535)
...+.....++.++|||+..+ ....+++++|++|||||+|++.. .+.|||+||+|+||+.||.++ +|..+|
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~-------~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~d 226 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFP-------ETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGD 226 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBT-------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEES
T ss_pred ccCCCCCCcCcEEEEcCcCCC-------CCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCcccc
Confidence 011112235689999999752 12458999999999999999976 568999999999999999998 799999
Q ss_pred eEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCc-ccCCCceEEEEEEcCCC
Q 009392 256 NIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPI-AVDNVTATATLHYSGTL 307 (535)
Q Consensus 256 ~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~-~~~~~~~~ail~Y~~~~ 307 (535)
++.|+||||+||++++++ ||.|+++||...-... ........++|.|.+.+
T Consensus 227 tv~l~pger~~v~~~a~~-pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 227 TVLIGPGERYDVILNMDN-PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEECTTCEEEEEEECCS-CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEECCCCEEEEEEECCC-CeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999999999997 8999999996422110 00113457899999865
No 19
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=1.6e-53 Score=432.91 Aligned_cols=271 Identities=25% Similarity=0.434 Sum_probs=225.8
Q ss_pred eeEEEEEEEEEEeeecc-CCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccC
Q 009392 22 RVRHYKFNVVMKNSTKL-CSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQC 100 (535)
Q Consensus 22 ~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~ 100 (535)
++++|+|++++..++++ |.++.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++.+.+|+||+|++|||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 57899999999999875 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEEEeCCCCcceeEecChhh--hh--cccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHHHHHHH
Q 009392 101 PIQSGHSYVYNFTITGQRGTLLWHAHILW--LR--ATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQA 176 (535)
Q Consensus 101 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~--~~--~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 176 (535)
+|+||++|+|+|++ .++||||||||... |. +||+|+|||+++.....+. ..++|++++++||+...... .
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~-~~d~e~~l~l~d~~~~~~~~----~ 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEK-RVTKDVIMMMSTWESAVADK----Y 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGG-GCSEEEEEEEEEECGGGTTC----T
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccc-cCCceEEEEeeheecccccc----c
Confidence 99999999999998 79999999999876 33 7999999999876532111 34789999999998632110 0
Q ss_pred HhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccc-eeEec
Q 009392 177 LQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVK-PFKTD 255 (535)
Q Consensus 177 ~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~-P~~~d 255 (535)
...+.....++.++|||+..+ ....+++++|++|||||+|++.. .+.|||+||+|+||+.||.+++ |..+|
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~-------~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~d 227 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFP-------LTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYAD 227 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTT-------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEES
T ss_pred CCCCCCccccceEEEccccCC-------CcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEE
Confidence 001111124688999999752 12468999999999999999954 7889999999999999999985 89999
Q ss_pred eEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCccc-CCCceEEEEEEcCCC
Q 009392 256 NIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAV-DNVTATATLHYSGTL 307 (535)
Q Consensus 256 ~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~-~~~~~~ail~Y~~~~ 307 (535)
++.|+||||+||+|++++ ||.|+++|+...-+.... ......++|+|.+..
T Consensus 228 tv~l~pg~r~~v~~~~~~-pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 228 TVLVSPGERYDVIIEADN-PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEECTTCEEEEEEECCS-CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEECCCCEEEEEEEeCC-CeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 999999999999999997 799999999654211111 123447999998755
No 20
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.3e-52 Score=482.06 Aligned_cols=442 Identities=15% Similarity=0.174 Sum_probs=276.0
Q ss_pred HhcccccceeEEEEEEEEEEeeecc--CC--------------------------ceeEE-------EECCC--------
Q 009392 14 LFPALVECRVRHYKFNVVMKNSTKL--CS--------------------------SKPIV-------TVNRK-------- 50 (535)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~~~~~~--g~--------------------------~~~~~-------~~NG~-------- 50 (535)
|+++++++++|+|.+.|++..+... +. .+..+ +||+.
T Consensus 12 ~~~~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 91 (1065)
T 2j5w_A 12 LCSTPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLG 91 (1065)
T ss_dssp --------CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGT
T ss_pred HhccccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccC
Confidence 3346667899999999999876532 22 12233 57877
Q ss_pred CCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccC----CCCCCCCCCC--cccCcCCCCCeEEEEEEeCCC-------
Q 009392 51 FPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQL----RTGWADGPAY--ITQCPIQSGHSYVYNFTITGQ------- 117 (535)
Q Consensus 51 ~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~----~~~~~DGvp~--~tq~~i~PG~~~~Y~~~~~~~------- 117 (535)
+|||+||+++||+|+|+|+|+|+++|+|||||++++ +.+|+||+++ +|||+|+||++|+|+|++.++
T Consensus 92 ~PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d 171 (1065)
T 2j5w_A 92 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGD 171 (1065)
T ss_dssp TSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTS
T ss_pred CcCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCC
Confidence 999999999999999999999999999999999987 4578888888 899999999999999999443
Q ss_pred --CcceeEecChhhhh---cccEEEEEEeCCCCCCCCCC-CCCceEEEEEEe------eccCChHHHHHHHHhCCCC---
Q 009392 118 --RGTLLWHAHILWLR---ATVHGAIVILPKRGVPYPFP-KPHKEVVVVLAE------WWKSDTEAVINQALQSGLA--- 182 (535)
Q Consensus 118 --~Gt~wYH~H~~~~~---~Gl~G~iiV~~~~~~~~~~~-~~~~e~~l~~~d------~~~~~~~~~~~~~~~~g~~--- 182 (535)
+||||||||.+.++ +||+|+|||++++....|.+ ..|+|++|+++| |+.......+. ...+..
T Consensus 172 ~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~--~~p~~~~~~ 249 (1065)
T 2j5w_A 172 GNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYC--SEPEKVDKD 249 (1065)
T ss_dssp CSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHC--SCGGGCCTT
T ss_pred CCceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhh--cCccccccc
Confidence 49999999999875 89999999999876443332 357899999994 54432211110 000000
Q ss_pred ----CCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCC-ceEEEEEcCceeEEEEeCCcccceeEeceE
Q 009392 183 ----PNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALN-EELFFKIAGHKLTVVEVDATYVKPFKTDNI 257 (535)
Q Consensus 183 ----~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l 257 (535)
....+.++|||+.. | ..+.++|++|++|||||+|+|.. ..+.|+|+||+|+ ++|+.+|++
T Consensus 250 ~~~~~~~~~~~~iNG~~~----~---~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv 314 (1065)
T 2j5w_A 250 NEDFQQSNRMYSVNGYTF----G---SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTI 314 (1065)
T ss_dssp CHHHHHHTEEEEETTEET----T---CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEE
T ss_pred cccccccCcEEEECCccC----C---CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEE
Confidence 00235799999974 1 24789999999999999999976 5889999999999 368899999
Q ss_pred EeCCCceEEEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCc-ccccccccccccc
Q 009392 258 VIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGT-AIANKFIDSLRSL 336 (535)
Q Consensus 258 ~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~l~~l 336 (535)
.|+||||+||+|++++ ||.|+|+|+..... .....+.+.|.+.+.......+..+..... ....+...++.+.
T Consensus 315 ~I~pGer~dVlv~~~~-pG~y~i~~h~~~h~-----~~Gm~~~~~V~~~~~~~~~~~~~g~~~~~~~i~A~e~~wdy~~~ 388 (1065)
T 2j5w_A 315 NLFPATLFDAYMVAQN-PGEWMLSCQNLNHL-----KAGLQAFFQVQECNKSSSKDNIRGKHVRHYYIAAEEIIWNYAPS 388 (1065)
T ss_dssp EECBTCEEEEEEECCS-CEEEEEEECSHHHH-----HTTCEEEEEEECSCCCCCCCCCTTSEEEEEEEEEEEEEEESCTT
T ss_pred EECCCcEEEEEEEeCC-CeeEEEEecCcchh-----hCCCEEEEEEecCCCccccccccccceeEEEEeceecccccCCC
Confidence 9999999999999998 89999999964211 123577888876544321111111000000 0000111111111
Q ss_pred cCCCC-CCC-CCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCcc
Q 009392 337 NSKKY-PAK-VPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHT 414 (535)
Q Consensus 337 ~~~~~-p~~-~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~ 414 (535)
....+ ... .++......+|..+.. .-|.++.-.++ +.|.. +.|..+.++. |.
T Consensus 389 ~~~~~~~~~~~~~~s~~~~~l~~~~~---------~ig~~y~k~v~-~~y~d--------------~~f~~~~~~~-~~- 442 (1065)
T 2j5w_A 389 GIDIFTKENLTAPGSDSAVFFEQGTT---------RIGGSYKKLVY-REYTD--------------ASFTNRKERG-PE- 442 (1065)
T ss_dssp SBCTTTCCBTTCTTCTTHHHHCCBTT---------BCCSEEEEEEE-EEESS--------------TTCCSBCCCC-GG-
T ss_pred CcccccccccCCCcccchhhhccCCc---------ccCceEeeeee-ecccC--------------CceEEcCcCC-cc-
Confidence 00000 000 0111111111110000 01223333333 33321 2232221111 10
Q ss_pred ccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccce
Q 009392 415 YNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNT 494 (535)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDT 494 (535)
+....--..++.++.|++++++|.|.. ...|+||+||+.|++++.|. .+.... .+..+...|++
T Consensus 443 --------~~~~g~lgpvi~a~~gd~i~i~f~N~~---~~~~s~h~hG~~f~~~~~g~-~~~~~~----~~~~~~~~~~~ 506 (1065)
T 2j5w_A 443 --------EEHLGILGPVIWAEVGDTIRVTFHNKG---AYPLSIEPIGVRFNKNNEGT-YYSPNY----NPQSRSVPPSA 506 (1065)
T ss_dssp --------GGGGTTSCCCEEEETTEEEEEEEEECS---SSCBCCEEESSBCCGGGCSB-CCBCC-----------CCCCS
T ss_pred --------cccccccCceEEEeCCCEEEEEEEECC---CCCccCcccceeeeccCCCc-cccccc----ccccCCccCCC
Confidence 000000135789999999999999975 67899999999999999863 222110 00112224555
Q ss_pred EEeCCCCEEEECCC---CCCCC-------CCeeeec
Q 009392 495 IGVPSGGWVAIRXX---XXXXX-------XAQIIQE 520 (535)
Q Consensus 495 v~vp~~g~~virf~---adnPG-------~w~~HCH 520 (535)
..|.|++..+-++. .+.|| .|+||+|
T Consensus 507 ~~v~Pg~~~~y~w~v~~~~~p~~~dp~c~~~~y~s~ 542 (1065)
T 2j5w_A 507 SHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSA 542 (1065)
T ss_dssp SCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECB
T ss_pred cccCCCCcEEEEEEccCCcCCCCCCCCeeEEEEecc
Confidence 56677774444433 34666 6999999
No 21
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=1.2e-49 Score=402.36 Aligned_cols=262 Identities=21% Similarity=0.287 Sum_probs=219.9
Q ss_pred cceeEEEEEEEEEEeeec-cCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCC--CCceEEeCCcccCCCCCCCCCCC
Q 009392 20 ECRVRHYKFNVVMKNSTK-LCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK--YNVTIHWHGVRQLRTGWADGPAY 96 (535)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~--~~t~iH~HG~~~~~~~~~DGvp~ 96 (535)
.+++++|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++ .++++||||+.+ +||++.
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~~ 109 (327)
T 1kbv_A 35 YPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGAA 109 (327)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGTT
T ss_pred CCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCCc
Confidence 468899999999999997 799999999999999999999999999999999996 589999999852 789875
Q ss_pred cccCcCCCCCeEEEEEEeCCCCcceeEecChh---hhh-cccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHH-
Q 009392 97 ITQCPIQSGHSYVYNFTITGQRGTLLWHAHIL---WLR-ATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEA- 171 (535)
Q Consensus 97 ~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~---~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~- 171 (535)
.+ .|.||++++|+|++ +++||||||||.+ .|. +||+|+|||++++. .+..++|.+++++||++.....
T Consensus 110 ~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~~ 182 (327)
T 1kbv_A 110 AT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKGA 182 (327)
T ss_dssp TT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTTC
T ss_pred ce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCcccc
Confidence 43 59999999999998 7899999999974 344 89999999998653 2356889999999999865210
Q ss_pred ------HHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeC
Q 009392 172 ------VINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVD 245 (535)
Q Consensus 172 ------~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~D 245 (535)
-+.... + ..++.++|||+.++... .+.+++++||+|||||+|+|....+.|+|+||+|+||+.|
T Consensus 183 ~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~-----~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~D 252 (327)
T 1kbv_A 183 QGLQPFDMDKAV--A---EQPEYVVFNGHVGALTG-----DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVE 252 (327)
T ss_dssp CEEECBCHHHHH--H---TCCSEEEETTSTTTTSG-----GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred ccccccChhHhc--c---CCCceEEEcCcccCCCC-----ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcC
Confidence 011111 1 24589999999863321 2679999999999999999988889999999999999999
Q ss_pred CcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCC
Q 009392 246 ATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLA 308 (535)
Q Consensus 246 G~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~ 308 (535)
|.+++|+.++++.|+||||+||+|++++ ||.|+|+|+....+ ......|+|+|.+...
T Consensus 253 G~~~~p~~~d~l~l~pGer~dv~v~~~~-pG~y~l~~h~~~~~----~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 253 GGKLINENVQSTIVPAGGSAIVEFKVDI-PGNYTLVDHSIFRA----FNKGALGQLKVEGAEN 310 (327)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEEECS-CEEEEEEESSTHHH----HHSSCEEEEEEESCCC
T ss_pred CCcCCCCceeEEEECCCCEEEEEEEeCC-CeEEEEEecccccc----ccCCcEEEEEECCCCC
Confidence 9999999999999999999999999997 89999999965431 1234689999997654
No 22
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.5e-51 Score=455.29 Aligned_cols=237 Identities=17% Similarity=0.207 Sum_probs=181.4
Q ss_pred EEEEEEEeeecc-CCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCC--------c
Q 009392 27 KFNVVMKNSTKL-CSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAY--------I 97 (535)
Q Consensus 27 ~l~~~~~~~~~~-g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~--------~ 97 (535)
.+++++.+.... |+.+..|+ ++|||+|||++||+|+|+|+|+|+++|||||||++++.. +||+|+ +
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~~~v 124 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREK 124 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCccccc
Confidence 455555555543 56666554 899999999999999999999999999999999998643 555554 8
Q ss_pred ccCcCCCCCeEEEEEEeCC---------CCcceeEecChhh--hh-cccEEEEEEeCCCCCCCCCCCCCceEEEEEEe--
Q 009392 98 TQCPIQSGHSYVYNFTITG---------QRGTLLWHAHILW--LR-ATVHGAIVILPKRGVPYPFPKPHKEVVVVLAE-- 163 (535)
Q Consensus 98 tq~~i~PG~~~~Y~~~~~~---------~~Gt~wYH~H~~~--~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d-- 163 (535)
|||+|+||++|+|+|++.+ ++||||||||.+. |. +||+|+|||+++.....+.....+|++|++++
T Consensus 125 tq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~d 204 (742)
T 2r7e_A 125 EDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFD 204 (742)
T ss_dssp SSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCC
T ss_pred ccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeeccc
Confidence 9999999999999999832 5699999999987 44 89999999999865432221224888888764
Q ss_pred ----eccCChHHHHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCc-eEEEEEcCce
Q 009392 164 ----WWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNE-ELFFKIAGHK 238 (535)
Q Consensus 164 ----~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~ 238 (535)
|+.......+... .........+.++|||+.. | ..+.+++++|++|||||+|+|... .+.|||+||.
T Consensus 205 e~~~w~~~~~~~~~~~~-~~~~~~~~~~~~~ING~~~----~---~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~ 276 (742)
T 2r7e_A 205 EGKSWHSETKNSLMQDR-DAASARAWPKMHTVNGYVN----R---SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHT 276 (742)
T ss_dssp CSSSSCCCCCC--------CCSCCCCCCCCEETTBCT----B---CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCC
T ss_pred CCccccccccccccccC-CCccccccCceEEECCccC----C---CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCE
Confidence 4443322111111 1111122356789999964 2 346789999999999999999875 6789999999
Q ss_pred eEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecC
Q 009392 239 LTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPF 285 (535)
Q Consensus 239 ~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~ 285 (535)
|+|++ ..+|++.|.|||+++|++++++ ||.|+++||..
T Consensus 277 f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~~-pG~w~~hCH~~ 314 (742)
T 2r7e_A 277 FLVRN--------HRQASLEISPITFLTAQTLLMD-LGQFLLFCHIS 314 (742)
T ss_dssp CEETT--------EECCSCCCCTTCCCEEEECCCS-CSEECCCCCSS
T ss_pred EEEEe--------EecceEEeCCCcEEEEEEEeCC-CeeEEEEeCCh
Confidence 99973 3579999999999999999997 89999999964
No 23
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=2.1e-48 Score=386.30 Aligned_cols=235 Identities=26% Similarity=0.344 Sum_probs=204.9
Q ss_pred ceeEEEEEEEEEEeeec-cCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCccc
Q 009392 21 CRVRHYKFNVVMKNSTK-LCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQ 99 (535)
Q Consensus 21 ~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq 99 (535)
..+++|+|++++..... +|..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||++. .++||+|+++|
T Consensus 32 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~~ 108 (288)
T 3gdc_A 32 RTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIGA 108 (288)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTSTT
T ss_pred CcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCccc
Confidence 46899999999998886 489999999999999999999999999999999999999999999972 45999999999
Q ss_pred CcCCCCCeEEEEEEeCCCCcceeEecChhh---hh-cccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHHHHHH
Q 009392 100 CPIQSGHSYVYNFTITGQRGTLLWHAHILW---LR-ATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQ 175 (535)
Q Consensus 100 ~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 175 (535)
|+|+||++++|+|++ +++||||||||... +. +||+|+|||+++.... ..++|++|+++||+..+
T Consensus 109 ~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~------- 176 (288)
T 3gdc_A 109 GSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG------- 176 (288)
T ss_dssp CSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS-------
T ss_pred eeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC-------
Confidence 999999999999998 89999999999973 44 8999999999987532 35799999999998762
Q ss_pred HHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCc-eEEEEEcCceeEEEEeCCcccceeEe
Q 009392 176 ALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNE-ELFFKIAGHKLTVVEVDATYVKPFKT 254 (535)
Q Consensus 176 ~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P~~~ 254 (535)
| ..++.++|||+.+.. ..+.++++.|+++|||++|+|... .+.|||+||.|+|++.++....|...
T Consensus 177 ----g---~~~~~~~iNG~~~~~------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~~ 243 (288)
T 3gdc_A 177 ----G---DDNEFYSVNGLPFHF------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYT 243 (288)
T ss_dssp ----T---TCCSEEEETTSTTHH------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEEE
T ss_pred ----C---CCcceEEECcccccc------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCcee
Confidence 1 135789999997510 124689999999999999999654 67899999999999844433367899
Q ss_pred ceEEeCCCceEEEEEEeCCCCceeEEEeec
Q 009392 255 DNIVIAPGQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 255 d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
|++.|+||||++|++++++ ||.|.++||.
T Consensus 244 Dtv~v~pg~~~~v~~~~~~-pG~~~~hCH~ 272 (288)
T 3gdc_A 244 DTISQVQGQRGILELRFPY-PGKFMFHAHK 272 (288)
T ss_dssp SEEEEETTCEEEEEECCCS-CEEEEEECSS
T ss_pred eEEEeCCCceEEEEEECCC-CEEEEEEecC
Confidence 9999999999999999996 8999999985
No 24
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.3e-47 Score=402.19 Aligned_cols=376 Identities=17% Similarity=0.121 Sum_probs=248.2
Q ss_pred ceeEEEEEEEEEEeeeccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccC
Q 009392 21 CRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQC 100 (535)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~ 100 (535)
+.++++.++++.+....+| .+++|||++ ||+|+|++||+|+|+|+|.+...+++||||.. ..++|
T Consensus 26 ~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~-----------~~~~~ 90 (447)
T 2dv6_A 26 PVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYA-----------ARSAI 90 (447)
T ss_dssp CEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTT-----------EECCC
T ss_pred CceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCC-----------cccce
Confidence 4667777776655555554 456899999 89999999999999999999888999999864 23679
Q ss_pred cCCCCCeEEEEEEeCCCCcceeEecChhhhh-cccEEEEEEeCCCCCCCC------------CCC-----CCceEEEEEE
Q 009392 101 PIQSGHSYVYNFTITGQRGTLLWHAHILWLR-ATVHGAIVILPKRGVPYP------------FPK-----PHKEVVVVLA 162 (535)
Q Consensus 101 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~iiV~~~~~~~~~------------~~~-----~~~e~~l~~~ 162 (535)
+|+||++++|+|++ .++||||||||..+++ +||+|.|+|+++....+. ++. ......+.+.
T Consensus 91 ~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~l~ 169 (447)
T 2dv6_A 91 VNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPIGPRQAKTVRIDLE 169 (447)
T ss_dssp BCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCCCSCCCCEEEEEEE
T ss_pred ecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCccccCCCcEEEEEEE
Confidence 99999999999998 6799999999998887 899999999987643221 000 0011111111
Q ss_pred --eeccCChHHHHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCC-CceEEEEEcCcee
Q 009392 163 --EWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAAL-NEELFFKIAGHKL 239 (535)
Q Consensus 163 --d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~ 239 (535)
..... ...| ...+.++|||+.. .|++++++|+++||||+|.+. ...+.+++||.
T Consensus 170 ~~~~~~~---------~~~g---~~~~~~~~NG~~p---------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~-- 226 (447)
T 2dv6_A 170 TVEVKGQ---------LDDN---TTYTYWTFNGKVP---------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA-- 226 (447)
T ss_dssp EEEEEEE---------EETT---EEEEEEEETTBBS---------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC--
T ss_pred EEEEEEe---------ccCC---ceeEEEEECCccC---------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc--
Confidence 00000 0011 1236799999851 289999999999999999985 34455666663
Q ss_pred EEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCC
Q 009392 240 TVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPP 319 (535)
Q Consensus 240 ~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~ 319 (535)
++.||.+ +++.|.||||+++++++++ +|+||+||+...... .. .....+.+.|.+... .|.
T Consensus 227 --~~~DG~~------~~~~i~pG~~~~~~~~~~~-~G~~~yh~h~~~~~~-~~-~~Gl~g~l~v~~~~~--------~P~ 287 (447)
T 2dv6_A 227 --TGPGGAA------AFTQTDPGEETVVTFKALI-PGIYVYHCATPSVPT-HI-TNGMYGLLLVEPEGG--------LPQ 287 (447)
T ss_dssp --CSGGGGG------GGCCBCTTCEEEEEEECCS-CEEEEEECCSSSHHH-HH-HTTCEEEEEEECTTC--------SCC
T ss_pred --cCCCCCC------ccEEeCCCCEEEEEEECCC-CeEEEEEeCCCChHH-HH-hCCCEEEEEEeCCCC--------CCC
Confidence 3578873 3446999999999999997 799999998521100 00 122356666654321 122
Q ss_pred CCCcccccccccccccccCCCCCCCCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhccc
Q 009392 320 KNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNI 399 (535)
Q Consensus 320 ~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~ 399 (535)
.++.. ... +....... ....+ ... .+.... .. ......|.|||+.+...
T Consensus 288 ~d~~~-~~~----~~~~~~~~-~~~~~----g~~--~~~~~~-----~~--~~~~~~~~iNG~~~~~~------------ 336 (447)
T 2dv6_A 288 VDREF-YVM----QGEIYTVK-SFGTS----GEQ--EMDYEK-----LI--NEKPEYFLFNGSVGSLT------------ 336 (447)
T ss_dssp CSEEE-EEE----EEEECBSS-CTTCC----EEC--CBBHHH-----HH--TTCCSEEEETTSTTCCC------------
T ss_pred CCeeE-EEE----ecccccCC-ccccc----ccc--cCChHH-----hh--ccCCCEEEECCcccCCC------------
Confidence 11110 000 00000000 00000 000 000000 00 01112467888755210
Q ss_pred CCccccCCCCCCCccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCC
Q 009392 400 SGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKK 479 (535)
Q Consensus 400 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~ 479 (535)
....+.++.|++++|+|.|.+ ....||||||||+|+||+.+.+.
T Consensus 337 -----------------------------~~~~~~v~~g~~vrlrliN~~--~~~~h~~hlhGh~f~vv~~dG~~----- 380 (447)
T 2dv6_A 337 -----------------------------RSHPLYASVGETVRIFFGVGG--PNFTSSFHVIGEIFDHVYSLGSV----- 380 (447)
T ss_dssp -----------------------------CCCCEEECTTCEEEEEEEEEE--SSCCEEEEEETCCEEEECGGGCS-----
T ss_pred -----------------------------CCcceEECCCCEEEEEEEeCC--CCceEeEEEcCcEEEEEEcCCcc-----
Confidence 013578899999999999975 24689999999999999997331
Q ss_pred CCCCCCCCCCC-ccceEEeCCCCEEEECCCCCCCCCCeeeec------cCceeee
Q 009392 480 DPKKFNLVDPV-ERNTIGVPSGGWVAIRXXXXXXXXAQIIQE------YGLCIAI 527 (535)
Q Consensus 480 ~~~~~n~~~p~-~RDTv~vp~~g~~virf~adnPG~w~~HCH------~gm~~~~ 527 (535)
+.+|. +|||+.|++++++.|+|++||||.|+|||| .||+..|
T Consensus 381 ------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~ 429 (447)
T 2dv6_A 381 ------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFL 429 (447)
T ss_dssp ------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEE
T ss_pred ------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEE
Confidence 12344 799999999999999999999999999999 5665544
No 25
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=2.7e-45 Score=386.71 Aligned_cols=263 Identities=20% Similarity=0.244 Sum_probs=220.3
Q ss_pred ccceeEEEEEEEEEEeeec-cCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCC--CCceEEeCCcccCCCCCCCCCC
Q 009392 19 VECRVRHYKFNVVMKNSTK-LCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK--YNVTIHWHGVRQLRTGWADGPA 95 (535)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~--~~t~iH~HG~~~~~~~~~DGvp 95 (535)
..+.+++|+|++++..++. +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+ +||++
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~ 98 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGA 98 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCC
Confidence 3468999999999999994 899999999999999999999999999999999986 599999999873 68887
Q ss_pred CcccCcCCCCCeEEEEEEeCCCCcceeEecCh---hhhh-cccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHH
Q 009392 96 YITQCPIQSGHSYVYNFTITGQRGTLLWHAHI---LWLR-ATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEA 171 (535)
Q Consensus 96 ~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~---~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 171 (535)
..+ +|+||++++|+|++ +++||||||||. ..+. +||+|+|||++++.. +..++|++|+++||++.....
T Consensus 99 ~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 99 ESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred ccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCccc
Confidence 653 69999999999998 789999999975 3455 899999999987542 246899999999998865310
Q ss_pred -------HHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEe
Q 009392 172 -------VINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEV 244 (535)
Q Consensus 172 -------~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~ 244 (535)
-+... .+ ..+++++|||+..+.. ..+.+++++|++|||||+|+|....+.|+|+||+|+||+.
T Consensus 172 ~~~~~~~~~~~~--~~---~~~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~ 241 (442)
T 2zoo_A 172 EAGLQPFDMAKA--ID---EDADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYV 241 (442)
T ss_dssp CCEEECBCHHHH--HT---TCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEG
T ss_pred ccccccCChhHh--cc---CCCCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEec
Confidence 00111 11 2568999999975211 1268999999999999999998888999999999999999
Q ss_pred CCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCC
Q 009392 245 DATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLA 308 (535)
Q Consensus 245 DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~ 308 (535)
||.+++|..++++.|+||||+||+|++++ +|.|+++|+..... ......++++|.+.+.
T Consensus 242 DG~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G~y~~~~~~~~~~----~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 242 EGGSLKNHNVQTTLIPAGGAAIVEFKVEV-PGTFILVDHSIFRA----FNKGALAMLKVEGPDD 300 (442)
T ss_dssp GGSSCEECSBSEEEECTTEEEEEEEECCS-CEEEEEEESSTHHH----HTTSCEEEEEEESCCC
T ss_pred CCccCCCccceEEEECCCeeEEEEEEcCC-CCeEEEEecccccc----cccCceEEEEecCCCC
Confidence 99999999999999999999999999997 89999999865331 1235689999987654
No 26
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.8e-45 Score=362.97 Aligned_cols=222 Identities=18% Similarity=0.286 Sum_probs=189.7
Q ss_pred ccceeEEEEEEEEEEeeeccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcc
Q 009392 19 VECRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYIT 98 (535)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~t 98 (535)
+.+++|+|+|++++.. .+.....++++||++|||+|||++||+|+|+|+|+++++++|||||+++... +||+| ++
T Consensus 3 ~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~~--~DG~~-~t 77 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-MN 77 (276)
T ss_dssp -CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-TT
T ss_pred CcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCCc--cCCCc-CC
Confidence 3478999999999853 2334445677999999999999999999999999999999999999999764 99999 99
Q ss_pred cCcCCCCCeEEEEEEeCC------------CCcceeEecChhh------hh-cccEEEEEEeCCCCCCCCCCCCCceEEE
Q 009392 99 QCPIQSGHSYVYNFTITG------------QRGTLLWHAHILW------LR-ATVHGAIVILPKRGVPYPFPKPHKEVVV 159 (535)
Q Consensus 99 q~~i~PG~~~~Y~~~~~~------------~~Gt~wYH~H~~~------~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l 159 (535)
||+|+||++|+|+|++.+ ++||||||||.++ |. +||+|+|||+++.... .|+|+++
T Consensus 78 ~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~-----~drE~~l 152 (276)
T 3kw8_A 78 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHTI 152 (276)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEEE
T ss_pred cCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc-----cccceEE
Confidence 999999999999999943 3799999999863 44 8999999999987632 3889999
Q ss_pred EEEeeccCChHHHHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCcee
Q 009392 160 VLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKL 239 (535)
Q Consensus 160 ~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 239 (535)
+++| ++|||+.. ...+.++++.|+++||||+|.+.. .+.||||||.|
T Consensus 153 ~l~~-------------------------~~iNG~~~-------~~~p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG~~f 199 (276)
T 3kw8_A 153 VFND-------------------------MTINNRKP-------HTGPDFEATVGDRVEIVMITHGEY-YHTFHMHGHRW 199 (276)
T ss_dssp EEET-------------------------TEETTCCT-------TCCCCEEEETTCEEEEEEEEESSC-CEEEEETTCCE
T ss_pred Eecc-------------------------cccceecc-------cCCCCEEEecCCEEEEEEecCCCc-ceeEEEcccee
Confidence 8865 38999974 245899999999999999999974 67799999999
Q ss_pred EEEEeCCccc----ceeEeceEEeCCCceEEEEEEeCC--CCceeEEEeec
Q 009392 240 TVVEVDATYV----KPFKTDNIVIAPGQTTNVLLSADK--TSGKYLVAASP 284 (535)
Q Consensus 240 ~via~DG~~v----~P~~~d~l~l~pGeR~dv~v~~~~--~~g~y~i~~~~ 284 (535)
.+++ ||... .+..+|++.|.|||++++++++++ .||.|++|||.
T Consensus 200 ~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~ 249 (276)
T 3kw8_A 200 ADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHV 249 (276)
T ss_dssp ESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECS
T ss_pred EEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCC
Confidence 9875 77543 246899999999999999999984 48999999995
No 27
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=1.2e-44 Score=367.39 Aligned_cols=267 Identities=18% Similarity=0.244 Sum_probs=210.5
Q ss_pred cceeEEEEEEEEEEeeec-cCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcc
Q 009392 20 ECRVRHYKFNVVMKNSTK-LCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYIT 98 (535)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~t 98 (535)
.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++.+....||.++++
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~~~ 105 (333)
T 1mzy_A 29 GPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGGLT 105 (333)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGGGC
T ss_pred CCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCcee
Confidence 468999999999999987 5999999999999999999999999999999999 589999999987654456666666
Q ss_pred cCcCCCCCeEEEEEEeCCCCcceeEecChhh-----hh-cccEEEEEEeCCCCCC----CCCCCCCceEEEEEEeeccC-
Q 009392 99 QCPIQSGHSYVYNFTITGQRGTLLWHAHILW-----LR-ATVHGAIVILPKRGVP----YPFPKPHKEVVVVLAEWWKS- 167 (535)
Q Consensus 99 q~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~-----~~-~Gl~G~iiV~~~~~~~----~~~~~~~~e~~l~~~d~~~~- 167 (535)
+ |+||++++|+|++ .++||||||||.++ |. +||+|+|||++++... .+. .+++|++|+++||++.
T Consensus 106 ~--i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~~ 181 (333)
T 1mzy_A 106 L--INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHYIPK 181 (333)
T ss_dssp C--BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCCB
T ss_pred E--eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeeccCc
Confidence 4 9999999999998 78999999999974 55 8999999999865422 122 4588999999999883
Q ss_pred -ChH---------HHHHH--HHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEc
Q 009392 168 -DTE---------AVINQ--ALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIA 235 (535)
Q Consensus 168 -~~~---------~~~~~--~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~ 235 (535)
... ..+.. ....+ ..++.++|||+.++.. ..+.++|++||+||||++|++....+ ..++
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ING~~~~~~-----~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~ 252 (333)
T 1mzy_A 182 DEDGTYMRFSDPSEGYEDMVAVMDT---LIPSHIVFNGAVGALT-----GEGALKAKVGDNVLFVHSQPNRDSRP-HLIG 252 (333)
T ss_dssp CTTSCBCCCSSHHHHHHHHHHHHTT---TCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EEET
T ss_pred cccccccccccccccccchhHHhhc---cCCcEEEECCcccccC-----CCcceEecCCCEEEEEECCCCCcccc-EEEC
Confidence 111 00100 01112 3568999999975211 13679999999988887777655545 4588
Q ss_pred CceeEEEEeCCcccc-ee-EeceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCC
Q 009392 236 GHKLTVVEVDATYVK-PF-KTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLA 308 (535)
Q Consensus 236 gh~~~via~DG~~v~-P~-~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~ 308 (535)
+|.|+|++ ||.+++ |. .+|++.|+||||+||+|++++ ||+|+++||..... ......++++|.+...
T Consensus 253 ~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG~y~~~ch~~~h~----~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 253 GHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PGVYAYVNHNLIEA----VHKGATAHVLVEGEWD 321 (333)
T ss_dssp CCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTCCEEEEEEESCCC
T ss_pred CCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CEEEEEecChhhhH----hhCCCEEEEEEcCCCC
Confidence 99999999 999986 44 589999999999999999997 79999999964321 0234578999987544
No 28
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=3.4e-45 Score=367.31 Aligned_cols=224 Identities=19% Similarity=0.290 Sum_probs=189.9
Q ss_pred ccccceeEEEEEEEEEEeeeccCC-ceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCC
Q 009392 17 ALVECRVRHYKFNVVMKNSTKLCS-SKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPA 95 (535)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp 95 (535)
+.+.+.+|.|+|.++. -++|. ...++..||++|||+|||++||+|+|+|+|+|++++||||||+++... +||+|
T Consensus 7 ~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST
T ss_pred CCCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc
Confidence 3456788999988753 34553 345667799999999999999999999999999999999999998765 99998
Q ss_pred CcccCcCCCCCeEEEEEEeC------------CCCcceeEecChhhh------h-cccEEEEEEeCCCCCCCCCCCCCce
Q 009392 96 YITQCPIQSGHSYVYNFTIT------------GQRGTLLWHAHILWL------R-ATVHGAIVILPKRGVPYPFPKPHKE 156 (535)
Q Consensus 96 ~~tq~~i~PG~~~~Y~~~~~------------~~~Gt~wYH~H~~~~------~-~Gl~G~iiV~~~~~~~~~~~~~~~e 156 (535)
.+||+|+||++|+|+|++. .++||||||||..++ . +||+|+|||+++.+. .+|+|
T Consensus 82 -~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e 155 (313)
T 3tas_A 82 -QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRT 155 (313)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEE
T ss_pred -cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----ccccc
Confidence 5999999999999999862 367999999998654 2 799999999998763 35899
Q ss_pred EEEEEEeeccCChHHHHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcC
Q 009392 157 VVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAG 236 (535)
Q Consensus 157 ~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~g 236 (535)
++|+++|| ++||+.. ...+.+.++.|+++||||+|++. ..+.|||+|
T Consensus 156 ~~l~~~d~-------------------------t~Ng~~~-------~~~~~l~v~~Ge~vr~~liN~g~-~~hpfHlHG 202 (313)
T 3tas_A 156 HTIVFNDM-------------------------TINNRPA-------HTGPDFEATVGDRVEFVMITHGE-YYHTFHLHG 202 (313)
T ss_dssp EEEEEETT-------------------------EETTCCT-------TCCCCEEEETTCEEEEEEEEESS-CCEEEEETT
T ss_pred ceeeccch-------------------------hcccCCc-------ccccccccccCCEEEEEEecccc-cceeeeecC
Confidence 99999876 4677654 23478999999999999999995 456799999
Q ss_pred ceeEEEEeCCccc---ceeEeceEEeCCCceEEEEEEeCC--CCceeEEEeec
Q 009392 237 HKLTVVEVDATYV---KPFKTDNIVIAPGQTTNVLLSADK--TSGKYLVAASP 284 (535)
Q Consensus 237 h~~~via~DG~~v---~P~~~d~l~l~pGeR~dv~v~~~~--~~g~y~i~~~~ 284 (535)
|.|++++.||... .|..+|++.|.||||++++|.+.+ .||.|+++||.
T Consensus 203 h~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi 255 (313)
T 3tas_A 203 HRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHV 255 (313)
T ss_dssp CCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECS
T ss_pred CeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCC
Confidence 9999999998876 478899999999999999998764 37999999995
No 29
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=9.2e-45 Score=361.38 Aligned_cols=224 Identities=19% Similarity=0.256 Sum_probs=186.2
Q ss_pred cccceeEEEEEEEEEEeeeccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCc
Q 009392 18 LVECRVRHYKFNVVMKNSTKLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYI 97 (535)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~ 97 (535)
.+.+.+|+|+|.+++..... ..+.++..||++|||+|||++||+|+|+|+|+|++++||||||+++.+. +||++ +
T Consensus 24 ~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~~-~ 98 (299)
T 3t9w_A 24 RAQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGTL-M 98 (299)
T ss_dssp ---CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-T
T ss_pred ccCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCCc-c
Confidence 44678999999988754211 2334455699999999999999999999999999999999999998754 99997 8
Q ss_pred ccCcCCCCCeEEEEEEeC------------CCCcceeEecChhhh------h-cccEEEEEEeCCCCCCCCCCCCCceEE
Q 009392 98 TQCPIQSGHSYVYNFTIT------------GQRGTLLWHAHILWL------R-ATVHGAIVILPKRGVPYPFPKPHKEVV 158 (535)
Q Consensus 98 tq~~i~PG~~~~Y~~~~~------------~~~Gt~wYH~H~~~~------~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~ 158 (535)
+||+|+||++|+|+|+++ .++||||||||..++ . +||+|+|||+++.+. .+++|++
T Consensus 99 ~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e~~ 173 (299)
T 3t9w_A 99 NGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQFT 173 (299)
T ss_dssp TTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEE
T ss_pred ccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Cccccce
Confidence 999999999999999873 268999999998653 2 799999999988753 3588999
Q ss_pred EEEEeeccCChHHHHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCce
Q 009392 159 VVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHK 238 (535)
Q Consensus 159 l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~ 238 (535)
+++++| .+||+.. ...+.++++.||++||||+|++... +.|||+||.
T Consensus 174 l~~~~~-------------------------~~Ng~~~-------~~~p~l~v~~Ge~Vr~~liN~~~~~-HpfHlHGh~ 220 (299)
T 3t9w_A 174 VVFNDM-------------------------MINNRAH-------HDAPTFEANLGERVEWIAIGHGSNF-HTFHLHGHR 220 (299)
T ss_dssp EEEETT-------------------------EETTCCT-------TCCCEEEEETTCEEEEEEEEESSCC-CEEEETTCC
T ss_pred eeeeee-------------------------eecCccc-------cccccceecCCCEEEEEEEeccccc-eeeeEecce
Confidence 998654 3777754 2347899999999999999999754 569999999
Q ss_pred eEEEEeCCcccc---eeEeceEEeCCCceEEEEEEeCC--CCceeEEEeec
Q 009392 239 LTVVEVDATYVK---PFKTDNIVIAPGQTTNVLLSADK--TSGKYLVAASP 284 (535)
Q Consensus 239 ~~via~DG~~v~---P~~~d~l~l~pGeR~dv~v~~~~--~~g~y~i~~~~ 284 (535)
|.+++.|+.... +..+|++.|.||||++++|.+.+ .||.|+++||.
T Consensus 221 F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi 271 (299)
T 3t9w_A 221 WLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHV 271 (299)
T ss_dssp EESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECS
T ss_pred EEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCC
Confidence 999999887663 45789999999999999997654 38999999995
No 30
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=1.4e-43 Score=360.71 Aligned_cols=268 Identities=19% Similarity=0.282 Sum_probs=206.6
Q ss_pred ccceeEEEEEEEEEEeeec--cCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCC
Q 009392 19 VECRVRHYKFNVVMKNSTK--LCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAY 96 (535)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~ 96 (535)
..+.+++|+|++++..++. ||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||.+.
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~ 110 (340)
T 2bw4_A 34 TGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGA 110 (340)
T ss_dssp SSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCcc
Confidence 3568999999999998884 59999999999999999999999999999999998 789999998776543444455
Q ss_pred cccCcCCCCCeEEEEEEeCCCCcceeEecChhh----hh-cccEEEEEEeCCCCCC----CCCCCCCceEEEEEEeeccC
Q 009392 97 ITQCPIQSGHSYVYNFTITGQRGTLLWHAHILW----LR-ATVHGAIVILPKRGVP----YPFPKPHKEVVVVLAEWWKS 167 (535)
Q Consensus 97 ~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~iiV~~~~~~~----~~~~~~~~e~~l~~~d~~~~ 167 (535)
++| |.||++++|+|++ .++||||||||.++ |. +||+|+|||++++... .+. .+++|++|+++||++.
T Consensus 111 ~~~--i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~ 186 (340)
T 2bw4_A 111 LTQ--VNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVP 186 (340)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCC
T ss_pred ceE--eCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeec
Confidence 554 9999999999998 68999999999873 55 8999999999875321 122 3578999999999873
Q ss_pred --ChH---------HHHHHHH--hCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEE
Q 009392 168 --DTE---------AVINQAL--QSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKI 234 (535)
Q Consensus 168 --~~~---------~~~~~~~--~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i 234 (535)
... ..+.... ..+ ..++.++|||+.+.. ...+.+++++|+++||++.|.+...++ .++
T Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~iNG~~~~~-----~~~~~l~v~~G~r~Rl~n~~~~~~~~~-~~i 257 (340)
T 2bw4_A 187 KDEAGNYKKYETPGEAYEDAVKAMRT---LTPTHIVFNGAVGAL-----TGDHALTAAVGERVLVVHSQANRDTRP-HLI 257 (340)
T ss_dssp BCTTSCBCCCCSHHHHHHHHHHHHHT---TCCSEEEETTSTTTT-----SGGGCEEEETTCEEEEEEEESSSCBCE-EEE
T ss_pred cccCCcccccccccccccchhhHhhc---CCCCEEEECCccCCc-----cCCCceEcCCCCEEEEEECCCCCccce-EEe
Confidence 111 1111100 012 246899999997521 114889999999888777766654444 458
Q ss_pred cCceeEEEEeCCcccc-ee-EeceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCC
Q 009392 235 AGHKLTVVEVDATYVK-PF-KTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLA 308 (535)
Q Consensus 235 ~gh~~~via~DG~~v~-P~-~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~ 308 (535)
++|.|+|++ ||.++. |. .+|++.|+||||+||+|++++ ||+|+++|+..... ......++++|.+...
T Consensus 258 ~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h----~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 258 GGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEA----FELGAAGHFKVTGEWN 327 (340)
T ss_dssp TCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTSCEEEEEEESCCC
T ss_pred cCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHH----HhCCCEEEEEECCCCc
Confidence 999999997 999885 54 589999999999999999998 89999999964211 0123568899987554
No 31
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=2e-43 Score=359.10 Aligned_cols=267 Identities=20% Similarity=0.293 Sum_probs=203.9
Q ss_pred cceeEEEEEEEEEEeee--ccCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCc
Q 009392 20 ECRVRHYKFNVVMKNST--KLCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYI 97 (535)
Q Consensus 20 ~~~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~ 97 (535)
.+.+++|+|++++..+. +||..+.+|+|||++|||+|+|++||+|+|+|+|.+ +++||||+++.+..++||.+.+
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~h~~~~h~~~~~~~~~~~ 105 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPA---TNAMPHNVDFHGATGALGGAKL 105 (336)
T ss_dssp CCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCC---CCCccccceECCCCCCCCCcce
Confidence 45789999999998876 569999999999999999999999999999999997 3456666666655567777777
Q ss_pred ccCcCCCCCeEEEEEEeCCCCcceeEecChhh----hh-cccEEEEEEeCCCCCCCCC---CCCCceEEEEEEeeccCCh
Q 009392 98 TQCPIQSGHSYVYNFTITGQRGTLLWHAHILW----LR-ATVHGAIVILPKRGVPYPF---PKPHKEVVVVLAEWWKSDT 169 (535)
Q Consensus 98 tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~iiV~~~~~~~~~~---~~~~~e~~l~~~d~~~~~~ 169 (535)
++ |+||++++|+|++ +++||||||||.++ |. +||+|+|||++++....+. ...|+|++|+++||++...
T Consensus 106 ~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~ 182 (336)
T 1oe1_A 106 TN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKG 182 (336)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBC
T ss_pred EE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccc
Confidence 65 9999999999998 78999999999864 44 8999999999875422111 1458899999999987411
Q ss_pred --HHH---------HHHHH--hCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEE-EEEc
Q 009392 170 --EAV---------INQAL--QSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELF-FKIA 235 (535)
Q Consensus 170 --~~~---------~~~~~--~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~-~~i~ 235 (535)
..+ +.... ..+ ..++.++|||+.+... ..+.++|++|++||| +|++....+. +.|+
T Consensus 183 ~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~liNG~~~~~~-----~~~~l~v~~GervRl--in~~~~~~~~~~~i~ 252 (336)
T 1oe1_A 183 PDGKYKDYATLAESYGDTVQVMRT---LTPSHIVFNGKVGALT-----GANALTAKVGETVLL--IHSQANRDTRPHLIG 252 (336)
T ss_dssp TTSSBCCCSSTGGGHHHHHHHHHT---TCCSEEEETTSTTTTS-----GGGCEEEETTCEEEE--EEEESSSCBCEEETT
T ss_pred cCCceeecccccccccchhhHhhc---CCCCEEEECCeeccCC-----CCcceEcCCCCEEEE--EecCCCCccceEEEC
Confidence 000 00000 111 2568999999975221 137899999997765 5665554443 4569
Q ss_pred CceeEEEEeCCccccee--EeceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCC
Q 009392 236 GHKLTVVEVDATYVKPF--KTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLA 308 (535)
Q Consensus 236 gh~~~via~DG~~v~P~--~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~ 308 (535)
+|.|+|++ ||.+++|. .++++.|+||||+||+|++++ ||.|+|+|+..... ......|+++|.+...
T Consensus 253 gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~----~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 253 GHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEA----FELGAAGHIKVEGKWN 321 (336)
T ss_dssp CCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTSCEEEEEEESCCC
T ss_pred CcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhcc----ccCCCeEEEEECCCCC
Confidence 99999997 99999753 479999999999999999998 89999999963211 0234678999987554
No 32
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=6.9e-44 Score=409.68 Aligned_cols=373 Identities=14% Similarity=0.064 Sum_probs=250.9
Q ss_pred CceeEEEECCCCCC--cEEEEecCCEEEEEEEECCCCCceEEeCCcccCC-CCCCCCCCCcccCcCCCCCeEEEEEEeCC
Q 009392 40 SSKPIVTVNRKFPG--PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLR-TGWADGPAYITQCPIQSGHSYVYNFTITG 116 (535)
Q Consensus 40 ~~~~~~~~NG~~pg--P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~-~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~ 116 (535)
..+.+.++||++|| |+|++++||+|+++|.|. .+.+||||+++.+ +.++||++.+| |+|.||.+++|+|.+ .
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 56789999999999 889999999999999976 5569999999998 88999999999 999999999999998 7
Q ss_pred CCcceeEecChhhhh-cccEEEEEEeCCCCCCCCCCCCCceEEEEE----EeeccCChHHHHHHHHh-CCCCCCCCceEE
Q 009392 117 QRGTLLWHAHILWLR-ATVHGAIVILPKRGVPYPFPKPHKEVVVVL----AEWWKSDTEAVINQALQ-SGLAPNVSDSHT 190 (535)
Q Consensus 117 ~~Gt~wYH~H~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~----~d~~~~~~~~~~~~~~~-~g~~~~~~~~~l 190 (535)
++||||||||...++ +||+|.++|++......+...++.|.++++ .||++.....+..++.. .+.. +...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---cccee
Confidence 999999999999988 999999999987655444446678899999 89999877654433211 2221 23344
Q ss_pred EcCccCC----------------CCCC----------CCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEe
Q 009392 191 INGQPGP----------------ISSC----------SSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEV 244 (535)
Q Consensus 191 iNG~~~~----------------~~~~----------~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~ 244 (535)
+|+.... .+.. -....|+|++++|+++++|++|... ..+.++.+| +.+.+.
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HG--l~~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHG--VQTESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESS--CBCSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeecc--ccccCC
Confidence 4442110 0110 0123489999999999999999964 445466665 444322
Q ss_pred CCcccceeEeceEEeCCCceEEEEEEeCCC---------CceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCC
Q 009392 245 DATYVKPFKTDNIVIAPGQTTNVLLSADKT---------SGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLT 315 (535)
Q Consensus 245 DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~---------~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~ 315 (535)
| ...+.|||+++..+.+.+. +|.||++++..... .....+ .+.|.......... .
T Consensus 845 -~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~-q~~~GL--~G~liV~~~~~l~~---~ 908 (1065)
T 2j5w_A 845 -T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVK-DLYSGL--IGPLIVCRRPYLKV---F 908 (1065)
T ss_dssp -C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHH-HHHTTC--EEEEEEECCC--------
T ss_pred -C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHH-hhhccc--cceeEecCcccccc---c
Confidence 1 2356899998888877642 25999998843100 001122 23232222111000 0
Q ss_pred CCCCCCCcccccccccccccccCCCCCCCCCCccceEEEEE-eecCcCCC-----------CC-c--cC--CCCCeeEEE
Q 009392 316 STPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFT-VGLGVNPC-----------PS-C--KA--GNGSRVVAS 378 (535)
Q Consensus 316 ~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~l~-~~~~~~~~-----------~~-~--~~--~~g~~~~~~ 378 (535)
. .+...+..+.+. ++.+.... |. . .. .......|.
T Consensus 909 ~----------------------------~~~d~D~~l~~~~~d~~~~~y~~~n~~~~~~~P~~v~~~~~~~~~~~~~~~ 960 (1065)
T 2j5w_A 909 N----------------------------PRRKLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHA 960 (1065)
T ss_dssp C----------------------------CCCEEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHTEEEE
T ss_pred C----------------------------CCcceEEEEEEEeecCCcceeeccCcccccCCccccCcchhhhhccCceEE
Confidence 0 000011111111 00000000 00 0 00 000001244
Q ss_pred EcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCe
Q 009392 379 INNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPV 458 (535)
Q Consensus 379 iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~ 458 (535)
|||+.|. +...+.++.|++|+|+|.|.+. ..+.|||
T Consensus 961 iNG~~~~-------------------------------------------~~~~~~v~~G~~vr~~l~N~g~-~~~~Hpf 996 (1065)
T 2j5w_A 961 INGRMFG-------------------------------------------NLQGLTMHVGDEVNWYLMGMGN-EIDLHTV 996 (1065)
T ss_dssp ETTBCTT-------------------------------------------CCCCCEEETTCEEEEEEEECCS-TTCCEEE
T ss_pred ECCccCC-------------------------------------------CCccEEeCCCCEEEEEEEeCCC-CCcceeE
Confidence 5554331 1234689999999999999752 2568999
Q ss_pred eecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCCCCCCeeeec------cCceeeee
Q 009392 459 HLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXXXXXAQIIQE------YGLCIAIW 528 (535)
Q Consensus 459 HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adnPG~w~~HCH------~gm~~~~~ 528 (535)
|||||.|+|++++ |.|||||.|+++++++|+|++||||.|+|||| .|||..+-
T Consensus 997 HlHG~~F~vv~~~-----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~ 1055 (1065)
T 2j5w_A 997 HFHGHSFQYKHRG-----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYT 1055 (1065)
T ss_dssp EESSCCEEETTTT-----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEE
T ss_pred EEcccEEEEEecC-----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEE
Confidence 9999999999763 78999999999999999999999999999999 89987653
No 33
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=3.8e-41 Score=370.64 Aligned_cols=248 Identities=17% Similarity=0.211 Sum_probs=183.2
Q ss_pred cceeEEEEEEEEEEeeecc-------------CCc-ee--EEEE----------------CCCCCCcEEEEecCCEEEEE
Q 009392 20 ECRVRHYKFNVVMKNSTKL-------------CSS-KP--IVTV----------------NRKFPGPTLYAREHDTVLVK 67 (535)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~-------------g~~-~~--~~~~----------------NG~~pgP~i~~~~Gd~v~v~ 67 (535)
.+++|+|-+-+++..+... |.. +. ...| |+++|||+|+|++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 3688999998888876532 211 11 1233 44799999999999999999
Q ss_pred EEECCCCCceEEeCCcccCCCCCCCCCCCcc--------cCcCCCCCeEEEEEEeCCC-----Cc----ceeEecChhh-
Q 009392 68 VVNHVKYNVTIHWHGVRQLRTGWADGPAYIT--------QCPIQSGHSYVYNFTITGQ-----RG----TLLWHAHILW- 129 (535)
Q Consensus 68 v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~t--------q~~i~PG~~~~Y~~~~~~~-----~G----t~wYH~H~~~- 129 (535)
|+|.|+++++|||||+++... +||+|+++ ||+|+||++|+|+|+++++ +| |||||||.+.
T Consensus 83 ~~N~l~~~~siH~HGl~~~~~--~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYEKS--SEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeCCC--CCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 999999999999999999754 99999887 9999999999999999543 57 9999999964
Q ss_pred -hh-cccEEEEEEeCCCCCCC--CCCCCCceEEEEEE------eeccCChHHHHHHHHhCCCCCCCCceEEEcCccCCCC
Q 009392 130 -LR-ATVHGAIVILPKRGVPY--PFPKPHKEVVVVLA------EWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPIS 199 (535)
Q Consensus 130 -~~-~Gl~G~iiV~~~~~~~~--~~~~~~~e~~l~~~------d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~ 199 (535)
|. +||+|+|||+++..... ..+..++|++|+++ ||+++............ .....++.++|||+..
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~--- 236 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASS-EVKNSHEFHAINGMIY--- 236 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSS---
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCc-chhhcCceeccCCEec---
Confidence 44 89999999999865321 11234689999999 67776543210000010 1123468999999964
Q ss_pred CCCCCCceeEEEeCCCEEEEEEEEcCCCc-eEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCcee
Q 009392 200 SCSSQGGFTLPVDSGKTYMLRIINAALNE-ELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKY 278 (535)
Q Consensus 200 ~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y 278 (535)
..|.+++++|++|||||+|++... .+.||+|||.|++|+.|| ..+|++.|+||||+||+|++++ ||.|
T Consensus 237 -----~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~~-pG~w 305 (647)
T 1sdd_B 237 -----NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKASK-PGWW 305 (647)
T ss_dssp -----CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECCS-SEEE
T ss_pred -----CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEecc-ceEe
Confidence 137899999999999999999764 788999999999998885 4789999999999999999997 7999
Q ss_pred EEEeec
Q 009392 279 LVAASP 284 (535)
Q Consensus 279 ~i~~~~ 284 (535)
+++||.
T Consensus 306 ~~hch~ 311 (647)
T 1sdd_B 306 LLDTEV 311 (647)
T ss_dssp EEECCC
T ss_pred ecccCc
Confidence 999996
No 34
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=2.2e-43 Score=353.31 Aligned_cols=216 Identities=19% Similarity=0.242 Sum_probs=158.4
Q ss_pred eeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCC----CCCCCCCCCcc--cCcCCCCCeEEEEEEeC
Q 009392 42 KPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLR----TGWADGPAYIT--QCPIQSGHSYVYNFTIT 115 (535)
Q Consensus 42 ~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~----~~~~DGvp~~t--q~~i~PG~~~~Y~~~~~ 115 (535)
+..+++| ++|||+|+|++||+|+|+|+|.++++++|||||++... .+++||+++++ ||+|+||++|+|+|+++
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~ 127 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS 127 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeC
Confidence 3456689 58999999999999999999999999999999999544 33444444444 79999999999999994
Q ss_pred CC---------CcceeEecChhh--hh-cccEEEEEEeCCCCCCC-CC-CCCCceEEEEEEeeccCChHHHHHHHHhCCC
Q 009392 116 GQ---------RGTLLWHAHILW--LR-ATVHGAIVILPKRGVPY-PF-PKPHKEVVVVLAEWWKSDTEAVINQALQSGL 181 (535)
Q Consensus 116 ~~---------~Gt~wYH~H~~~--~~-~Gl~G~iiV~~~~~~~~-~~-~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~ 181 (535)
++ +||||||||... |. +||+|+|||+++..... +. ...++|++|+++||.... +.
T Consensus 128 ~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~---------~~-- 196 (306)
T 1sdd_A 128 EHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESK---------SW-- 196 (306)
T ss_dssp GGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTS---------SS--
T ss_pred CccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEeccccc---------cc--
Confidence 33 379999999876 44 89999999998753211 11 135789999999984321 00
Q ss_pred CCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCC-ceEEEEEcCceeEEEEeCCcccceeEeceEEeC
Q 009392 182 APNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALN-EELFFKIAGHKLTVVEVDATYVKPFKTDNIVIA 260 (535)
Q Consensus 182 ~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~ 260 (535)
....++.++|||+... ..|.+++++|+++||||+|+|.. ..+.|+++||.|.+ || ..+|++.|+
T Consensus 197 ~~~~~~~~~ING~~~~-------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~ 261 (306)
T 1sdd_A 197 NQTSSLMYTVNGYVNG-------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLV 261 (306)
T ss_dssp SCCCCEEECSSSCCSS-------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEE
T ss_pred ccCCCcceeeCCEecC-------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEEC
Confidence 0123578999999741 23789999999999999999987 46679999999975 87 358999999
Q ss_pred CCceEEEEEEeCCCCceeEEEeecC
Q 009392 261 PGQTTNVLLSADKTSGKYLVAASPF 285 (535)
Q Consensus 261 pGeR~dv~v~~~~~~g~y~i~~~~~ 285 (535)
||||+||+|++++ ||.|+++|+..
T Consensus 262 pger~~v~~~~~~-pG~~~~hch~~ 285 (306)
T 1sdd_A 262 SATSTTANMTVSP-EGRWTIASLIP 285 (306)
T ss_dssp TTCCBC---------CCCCCBCCST
T ss_pred CCcEEEEEEEcCC-CeEEEEEeCCh
Confidence 9999999999997 89999999964
No 35
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=2.2e-40 Score=335.88 Aligned_cols=236 Identities=17% Similarity=0.246 Sum_probs=188.9
Q ss_pred ceeEEEEEEEEEEeeeccCCcee-EEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCccc
Q 009392 21 CRVRHYKFNVVMKNSTKLCSSKP-IVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQ 99 (535)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~g~~~~-~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq 99 (535)
+++++|+|++++. ++|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||+.+. .++||+| ++|
T Consensus 46 g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~-~t~ 119 (343)
T 3cg8_A 46 GEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTA-MNK 119 (343)
T ss_dssp CCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT-TTT
T ss_pred CeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcc-ccc
Confidence 5779999999875 3443221 1235899999999999999999999999999999999999987 3599999 899
Q ss_pred CcCCCCCeEEEEEEeCC------------CCcceeEecChh------hhh-cccEEEEEEeCCCCCCCCCCCCCceEEEE
Q 009392 100 CPIQSGHSYVYNFTITG------------QRGTLLWHAHIL------WLR-ATVHGAIVILPKRGVPYPFPKPHKEVVVV 160 (535)
Q Consensus 100 ~~i~PG~~~~Y~~~~~~------------~~Gt~wYH~H~~------~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~ 160 (535)
|+|+||++|+|+|++.. ++||||||||.. .|. .||+|+|||+++.+. .+++|++++
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l~ 194 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 194 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEEE
Confidence 99999999999999832 359999999973 344 899999999988653 247899998
Q ss_pred EEeeccCChHHHHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeE
Q 009392 161 LAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLT 240 (535)
Q Consensus 161 ~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 240 (535)
++|| +|||+.. ...+.++++.||+|||||+|.+. ..+.||||||.|+
T Consensus 195 ~~d~-------------------------~iNG~~~-------~~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f~ 241 (343)
T 3cg8_A 195 FNDM-------------------------TINNRKP-------HTGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWA 241 (343)
T ss_dssp EETT-------------------------EETTCCT-------TCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEE
T ss_pred cccc-------------------------eecccCC-------CCCccEEeCCCCEEEEEEEcCCc-cccccEecCcEEE
Confidence 8753 7999864 13478999999999999999996 4667999999999
Q ss_pred EEEeCCcccc----eeEeceEEeCCCceEEEEEEeC--CCCceeEEEeecCCCCCcccCCCceEEEEEEcCC
Q 009392 241 VVEVDATYVK----PFKTDNIVIAPGQTTNVLLSAD--KTSGKYLVAASPFMDAPIAVDNVTATATLHYSGT 306 (535)
Q Consensus 241 via~DG~~v~----P~~~d~l~l~pGeR~dv~v~~~--~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~ 306 (535)
++ .||.... +..+|++.|.|||+++++++++ ..||.|+++||...-. .....+.+.+...
T Consensus 242 v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~-----~~GM~g~~~V~~~ 307 (343)
T 3cg8_A 242 DN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHS-----DMGMVGLFLVKKP 307 (343)
T ss_dssp SS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH-----HTTCEEEEEEECT
T ss_pred Ee-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHHH-----hccCcEEEEEecC
Confidence 97 4675543 4678999999999999999973 2489999999953211 1234566666643
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.2e-39 Score=344.38 Aligned_cols=260 Identities=20% Similarity=0.295 Sum_probs=210.5
Q ss_pred ceeEEEEEEEEEEeeec-cCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCC--CCceEEeCCcccCCCCCCCCCCCc
Q 009392 21 CRVRHYKFNVVMKNSTK-LCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK--YNVTIHWHGVRQLRTGWADGPAYI 97 (535)
Q Consensus 21 ~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~--~~t~iH~HG~~~~~~~~~DGvp~~ 97 (535)
+.++.|+|++.+..... +|....+|+|||++|||+|++++||+++|+|+|.+. ..++|||||+.+ +||+|..
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCcc
Confidence 46778889887777666 688889999999999999999999999999999985 579999999852 7999876
Q ss_pred ccCcCCCCCeEEEEEEeCCCCcceeEecChh---hhh-cccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHH--
Q 009392 98 TQCPIQSGHSYVYNFTITGQRGTLLWHAHIL---WLR-ATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEA-- 171 (535)
Q Consensus 98 tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~---~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-- 171 (535)
++ |.||++++|.|++ +++||||||||.. .+. .||+|+|+|+++.. .+..++|.++++.||++.....
T Consensus 236 ~~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 TQ--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp CC--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTCC
T ss_pred EE--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCccccc
Confidence 54 9999999999998 7899999999974 344 89999999998653 2246788999999998753210
Q ss_pred -----HHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCC
Q 009392 172 -----VINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDA 246 (535)
Q Consensus 172 -----~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG 246 (535)
...... + ..++.++|||+..+.. ..+.+++++|++|||||+|++....+.|||+||+|+||+.||
T Consensus 309 g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~-----~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG 378 (447)
T 2dv6_A 309 GEQEMDYEKLI--N---EKPEYFLFNGSVGSLT-----RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLG 378 (447)
T ss_dssp EECCBBHHHHH--T---TCCSEEEETTSTTCCC-----CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGG
T ss_pred ccccCChHHhh--c---cCCCEEEECCcccCCC-----CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCC
Confidence 011111 1 1357899999976321 125799999999999999999878889999999999999999
Q ss_pred cccce-e-EeceEEeCCCceEEEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCC
Q 009392 247 TYVKP-F-KTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLA 308 (535)
Q Consensus 247 ~~v~P-~-~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~ 308 (535)
.+++| . .+|++.|.||||++|+|++++ ||.|+|+|+..... .....++++|.+.+.
T Consensus 379 ~~~~~p~~~~dtv~l~pg~r~~i~~~~~~-pG~~~~hch~~~h~-----~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 379 SVVSPPLIGVQTVSVPPGGATIVDFKIDR-AGRYILVDHALSRL-----EHGLVGFLNVDGPKN 436 (447)
T ss_dssp CSSSCCEEEESEEEECTTEEEEEEEECCS-CEEEEEEESSGGGG-----GGTCCEEEEECSCSC
T ss_pred cccCCCcccccEEEECCCcEEEEEEECCC-CEEEEEEecCcCcc-----ccCCEEEEEEeCCCC
Confidence 99854 4 589999999999999999997 89999999965321 123479999987543
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=2.5e-41 Score=374.18 Aligned_cols=248 Identities=14% Similarity=0.128 Sum_probs=194.6
Q ss_pred cceeEEEEEEEEEEee--eccCC---------------ceeE--EEE-CC---------------CCCCcEEEEecCCEE
Q 009392 20 ECRVRHYKFNVVMKNS--TKLCS---------------SKPI--VTV-NR---------------KFPGPTLYAREHDTV 64 (535)
Q Consensus 20 ~~~~~~~~l~~~~~~~--~~~g~---------------~~~~--~~~-NG---------------~~pgP~i~~~~Gd~v 64 (535)
.+.+|+|.|.+++..+ +++|. .+.+ +.| |+ ++|||+|||++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 5789999999999874 55553 1222 222 33 689999999999999
Q ss_pred EEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCC---------CCcceeEecChhhh--h-c
Q 009392 65 LVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITG---------QRGTLLWHAHILWL--R-A 132 (535)
Q Consensus 65 ~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~---------~~Gt~wYH~H~~~~--~-~ 132 (535)
+|+|+|.++++++|||||+++..... ||+|+ +||+|+||++|+|+|++++ ++||||||||.+.+ . +
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~ 287 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHS 287 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHT
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhC
Confidence 99999999999999999999998842 69998 9999999999999999843 89999999999873 4 8
Q ss_pred ccEEEEEEeCCCCCCC--CCCCCCceEEEEEEe------eccCChHHHHHHHHhCCC-------CCCCCceEEEcCccCC
Q 009392 133 TVHGAIVILPKRGVPY--PFPKPHKEVVVVLAE------WWKSDTEAVINQALQSGL-------APNVSDSHTINGQPGP 197 (535)
Q Consensus 133 Gl~G~iiV~~~~~~~~--~~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~~g~-------~~~~~~~~liNG~~~~ 197 (535)
||+|+|||+++..... .....++|++|++++ |+.+.....+. ..... .....+.++|||+..
T Consensus 288 GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~--~~p~~~~~~d~~~~~~~~~~~ING~~~- 364 (770)
T 2r7e_B 288 GLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMERNC--RAPCNIQMEDPTFKENYRFHAINGYIM- 364 (770)
T ss_dssp SCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSSCS--CCSSCCCSSSSSSTTTSCEECTTSCTT-
T ss_pred CceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhhcc--cCccccccCCccccccCCccccCCccC-
Confidence 9999999999865321 112457899888754 44432210000 00000 011235689999964
Q ss_pred CCCCCCCCceeEEEeCCCEEEEEEEEcCCCc-eEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCc
Q 009392 198 ISSCSSQGGFTLPVDSGKTYMLRIINAALNE-ELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSG 276 (535)
Q Consensus 198 ~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g 276 (535)
...+.+++++|++|||||+|+|... .+.||||||.|+|++.||. .+|++.|.||||++|+|++++ ||
T Consensus 365 ------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~-pG 432 (770)
T 2r7e_B 365 ------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK-AG 432 (770)
T ss_dssp ------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS-CB
T ss_pred ------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC-CC
Confidence 1346789999999999999998653 6789999999999999973 899999999999999999997 89
Q ss_pred eeEEEeec
Q 009392 277 KYLVAASP 284 (535)
Q Consensus 277 ~y~i~~~~ 284 (535)
.|+|+||.
T Consensus 433 ~w~~hcH~ 440 (770)
T 2r7e_B 433 IWRVECLI 440 (770)
T ss_dssp CCCBCCCS
T ss_pred ceEEEecc
Confidence 99999995
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=8.9e-38 Score=345.31 Aligned_cols=216 Identities=21% Similarity=0.276 Sum_probs=168.1
Q ss_pred CCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCC-----CCCCcccCcCCCCCeEEEEEEeCCCCc-----
Q 009392 50 KFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWAD-----GPAYITQCPIQSGHSYVYNFTITGQRG----- 119 (535)
Q Consensus 50 ~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~D-----Gvp~~tq~~i~PG~~~~Y~~~~~~~~G----- 119 (535)
.+|||+||+++||+|+|+|+|.+++++||||||+++. .+|+| |+++++||+|+||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999984 45565 567788999999999999999955444
Q ss_pred ----ceeEecChhhhh---cccEEEEEEeCCCCCC-CC-CCCCCceEEEEEEe------eccCChHHHHHHHHh-CCCC-
Q 009392 120 ----TLLWHAHILWLR---ATVHGAIVILPKRGVP-YP-FPKPHKEVVVVLAE------WWKSDTEAVINQALQ-SGLA- 182 (535)
Q Consensus 120 ----t~wYH~H~~~~~---~Gl~G~iiV~~~~~~~-~~-~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~-~g~~- 182 (535)
|||||||.+.+. +||+|+|||+++.... .+ ....++|++|++++ |+..... ..+.. ....
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~---~~~~~~p~~v~ 603 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENI---QRFLPNPAGVQ 603 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHH---HHHSSSSSCSC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccch---hhcccCchhcc
Confidence 999999998753 8999999999875321 11 12457899999965 4332111 11110 0000
Q ss_pred ---C---CCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCC-ceEEEEEcCceeEEEEeCCcccceeEec
Q 009392 183 ---P---NVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALN-EELFFKIAGHKLTVVEVDATYVKPFKTD 255 (535)
Q Consensus 183 ---~---~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d 255 (535)
+ .....++|||+.. |+ .+ +.+++||+|||||+|+|.. ..+.|||+||.|+|+ |..+|
T Consensus 604 ~~~~~~~~~~~~~~ING~~~----~~---~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~D 667 (742)
T 2r7e_A 604 LEDPEFQASNIMHSINGYVF----DS---LQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYED 667 (742)
T ss_dssp CCCHHHHGGGCCBCTTTTCS----SC---CC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBC
T ss_pred cccccccccCceeeecCcCC----CC---Cc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------cccee
Confidence 0 0113578999964 11 13 8999999999999998764 457899999999986 67899
Q ss_pred eEEeCCCceEEEEEEeCCCCceeEEEeecCC
Q 009392 256 NIVIAPGQTTNVLLSADKTSGKYLVAASPFM 286 (535)
Q Consensus 256 ~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~ 286 (535)
++.|.||||++|+|++++ ||.|+++||...
T Consensus 668 tv~l~Pg~~~~v~~~ad~-pG~w~~hcH~~~ 697 (742)
T 2r7e_A 668 TLTLFPFSGETVFMSMEN-PGLWILGCHNSD 697 (742)
T ss_dssp SSCCCCCSSEECCEECCC-CCCSCCEECCCS
T ss_pred EEEECCCcEEEEEEEcCC-CeEEEEEeCCch
Confidence 999999999999999997 899999999653
No 39
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.93 E-value=2.7e-26 Score=232.66 Aligned_cols=226 Identities=15% Similarity=0.143 Sum_probs=146.9
Q ss_pred CceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEe---CCcccceeEeceEEeCCC
Q 009392 186 SDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEV---DATYVKPFKTDNIVIAPG 262 (535)
Q Consensus 186 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~---DG~~v~P~~~d~l~l~pG 262 (535)
...+++||+.. .|+|++++|+++|+|++|.+... .+||.|-+.+.+. ||.+. +....|.||
T Consensus 23 ~~~~~~NG~~p---------GP~I~v~~Gd~v~v~v~N~l~~~---~siH~HG~~~~~~~~~DGvp~----vtq~~I~PG 86 (339)
T 2zwn_A 23 YKVFGFNGQVP---------GPLIHVQEGDDVIVNVTNNTSLP---HTIHWHGVHQKGTWRSDGVPG----VTQQPIEAG 86 (339)
T ss_dssp EEEEEETTBSS---------CCEEEEETTCEEEEEEEEESSSC---BCCEEETCCCTTCGGGSCCBT----TTBCCBCTT
T ss_pred EEEEEECCccC---------CCeEEEECCCEEEEEEEECCCCC---ccEEeCCCCcCCCcccCCCCc----cccCccCCC
Confidence 36899999941 28999999999999999998643 3555566777765 99863 344679999
Q ss_pred ceEEEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCC
Q 009392 263 QTTNVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYP 342 (535)
Q Consensus 263 eR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p 342 (535)
||+++.+++++ +|+||+||+............. .+++.... ... ..+. .
T Consensus 87 ~~~~y~f~~~~-~Gt~wyH~H~~~~~q~~~~Gl~-G~liV~p~-~~~---~~~~--~----------------------- 135 (339)
T 2zwn_A 87 DSYTYKFKADR-IGTLWYHCHVNVNEHVGVRGMW-GPLIVDPK-QPL---PIEK--R----------------------- 135 (339)
T ss_dssp CEEEEEEECCS-CEEEEEECCSSHHHHTTTSCCE-EEEEEECS-SCC---TTGG--G-----------------------
T ss_pred CeEEEEEECCC-CEEEEEEecCCchhhhhcCCce-EeEEecCC-Ccc---cccc--c-----------------------
Confidence 99999999986 8999999985321000001222 23333221 110 0000 0
Q ss_pred CCCCCccceEEEEEee---cCcCCCCCccCCCC-CeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCC
Q 009392 343 AKVPQTVDHNLLFTVG---LGVNPCPSCKAGNG-SRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFT 418 (535)
Q Consensus 343 ~~~p~~~~~~~~l~~~---~~~~~~~~~~~~~g-~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~ 418 (535)
.++.+.+.++ ......+...+..+ ..-.|.|||+.+.
T Consensus 136 ------~d~e~~l~l~d~~~~~~~~~~~~g~~~~~~~~~~ING~~~~--------------------------------- 176 (339)
T 2zwn_A 136 ------VTKDVIMMMSTWESAVADKYGEGGTPMNVADYFSVNAKSFP--------------------------------- 176 (339)
T ss_dssp ------CSEEEEEEEEEECGGGTTCTTCCCSTTSCCCEEEETTBCTT---------------------------------
T ss_pred ------CCceEEEEeeheecccccccCCCCCCccccceEEEccccCC---------------------------------
Confidence 0111111000 00000000000000 0124678886541
Q ss_pred CCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeC
Q 009392 419 GTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVP 498 (535)
Q Consensus 419 ~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp 498 (535)
....+.++.|++++|+|.|.+ ...||||||||+|+|++.+.+ .+.+|.++||+.|+
T Consensus 177 ----------~~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~DG~-----------~~~~p~~~dtv~l~ 232 (339)
T 2zwn_A 177 ----------LTQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKDGL-----------PLDSPYYADTVLVS 232 (339)
T ss_dssp ----------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEETTE-----------EEEEEEEESEEEEC
T ss_pred ----------CcccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeCCe-----------ecCCCcEEEEEEEC
Confidence 012468899999999999976 458999999999999998632 12348899999999
Q ss_pred CCCEEEECCCCCCCCCCeeeecc
Q 009392 499 SGGWVAIRXXXXXXXXAQIIQEY 521 (535)
Q Consensus 499 ~~g~~virf~adnPG~w~~HCH~ 521 (535)
+++++.|+|++|+||.|+||||+
T Consensus 233 pg~r~~v~~~~~~pG~w~~hch~ 255 (339)
T 2zwn_A 233 PGERYDVIIEADNPGRFIFHDHV 255 (339)
T ss_dssp TTCEEEEEEECCSCSEEEEEECC
T ss_pred CCCEEEEEEEeCCCeeEEEEEec
Confidence 99999999999999999999994
No 40
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.92 E-value=6.6e-25 Score=217.37 Aligned_cols=225 Identities=17% Similarity=0.159 Sum_probs=154.8
Q ss_pred CceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceE
Q 009392 186 SDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTT 265 (535)
Q Consensus 186 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~ 265 (535)
...+++||+.. .|+|+++.|+++++|+.|..... ..+|+||.. ..+.||.+. .+...|.|||++
T Consensus 54 ~~~~~~ng~~p---------gP~i~~~~Gd~v~v~~~N~~~~~-~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~ 117 (288)
T 3gdc_A 54 FKGWSYNGRIP---------GPTLWAREGDALRIHFTNAGAHP-HTIHFHGVH--RATMDGTPG----IGAGSIAPGQSF 117 (288)
T ss_dssp EEEEEETTBSS---------CCEEEEETTCEEEEEEEECSSSC-BCCEESSCC--CGGGSCCTT----STTCSBCTTCEE
T ss_pred EEEEEECCccC---------CCcEEEeCCCEEEEEEEeCCCCc-ccEEecccc--ccccCCCCC----ccceeECCCCEE
Confidence 36899999852 38999999999999999998654 558999875 457888764 244678999999
Q ss_pred EEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCC
Q 009392 266 NVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKV 345 (535)
Q Consensus 266 dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 345 (535)
++.+++++ +|.||++||............ .+.|....... .+.
T Consensus 118 ~y~f~~~~-~Gt~~yH~H~~~~~~~~~~Gl--~G~liV~~~~~--------~~~-------------------------- 160 (288)
T 3gdc_A 118 TYEFDATP-FGTHLYHCHQSPLAPHIAKGL--YGGFIVEPKEG--------RPP-------------------------- 160 (288)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHHHHHTTC--EEEEEEECSSC--------CCC--------------------------
T ss_pred EEEEEcCC-CccEEEEecCcchHHHHhCcC--eEEEEEeCCcc--------CCC--------------------------
Confidence 99999975 899999999642100001122 22222221110 000
Q ss_pred CCccceEEEEEee-cCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCCCCCCCC
Q 009392 346 PQTVDHNLLFTVG-LGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNL 424 (535)
Q Consensus 346 p~~~~~~~~l~~~-~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 424 (535)
.++++.+.+. +... .+ . ..-.|.|||+.|...
T Consensus 161 ---~d~e~~l~~~d~~~~-----~g-~-~~~~~~iNG~~~~~~------------------------------------- 193 (288)
T 3gdc_A 161 ---ADDEMVMVMNGYNTD-----GG-D-DNEFYSVNGLPFHFM------------------------------------- 193 (288)
T ss_dssp ---CSEEEEEEEEEECCS-----ST-T-CCSEEEETTSTTHHH-------------------------------------
T ss_pred ---CcceEEEEEeeEecC-----CC-C-CcceEEECccccccc-------------------------------------
Confidence 1222222221 1100 00 0 112478999866210
Q ss_pred ccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEE
Q 009392 425 QTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVA 504 (535)
Q Consensus 425 ~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~v 504 (535)
...+.++.|++|+|.|.|.+. ..+.||||||||.|+|++.|.. +..|.++||+.|++++.+.
T Consensus 194 -----~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~~------------~~~~~~~Dtv~v~pg~~~~ 255 (288)
T 3gdc_A 194 -----DFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGTM------------LTPSEYTDTISQVQGQRGI 255 (288)
T ss_dssp -----HSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTCC------------SSCSEEESEEEEETTCEEE
T ss_pred -----CcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCCc------------cCCCceeeEEEeCCCceEE
Confidence 113578899999999999751 1246999999999999985421 2346899999999999999
Q ss_pred ECCCCCCCCCCeeeec------cCceeeee
Q 009392 505 IRXXXXXXXXAQIIQE------YGLCIAIW 528 (535)
Q Consensus 505 irf~adnPG~w~~HCH------~gm~~~~~ 528 (535)
|+|++++||.|+|||| .|||..+-
T Consensus 256 v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~ 285 (288)
T 3gdc_A 256 LELRFPYPGKFMFHAHKTEFAELGWMGFFE 285 (288)
T ss_dssp EEECCCSCEEEEEECSSHHHHTTTCEEEEE
T ss_pred EEEECCCCEEEEEEecChHHHhcCCCEEEE
Confidence 9999999999999999 89998764
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.92 E-value=3.7e-25 Score=221.93 Aligned_cols=230 Identities=16% Similarity=0.119 Sum_probs=147.9
Q ss_pred ceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEE-EEeCCcccceeEeceEEeCCCceE
Q 009392 187 DSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTV-VEVDATYVKPFKTDNIVIAPGQTT 265 (535)
Q Consensus 187 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~v~P~~~d~l~l~pGeR~ 265 (535)
..+++||+.. .|+|+++.|+++++|+.|.... ...+|+||....- .+.||.+. +....|.|||++
T Consensus 23 ~~~~~ng~~p---------GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQVP---------APLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBSS---------CCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCccC---------CceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEE
Confidence 5799999852 3899999999999999999754 4568888876542 36788764 234578999999
Q ss_pred EEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCC
Q 009392 266 NVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKV 345 (535)
Q Consensus 266 dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 345 (535)
++.+++++ +|+||+|||............. .+++.... ... ..+. ..+.. ....+.+-..... ....
T Consensus 89 ~y~f~~~~-~Gt~wYH~H~~~~~~~~~~Gl~-G~lIV~~~-~~~---~~~~--~~d~e-~~l~l~dw~~~~~-~~~~--- 155 (318)
T 3g5w_A 89 TYKFKAEP-AGTMWYHCHVNVNEHVTMRGMW-GPLIVEPK-NPL---PIEK--TVTKD-YILMLSDWVSSWA-NKPG--- 155 (318)
T ss_dssp EEEEECCS-CEEEEEECCSSHHHHHHHSCCE-EEEEEECS-SCC---HHHH--TCCEE-EEEEEEEECGGGT-TCTT---
T ss_pred EEEEEcCC-CEEEEEEccCChhhhhccCCCE-EEEEEcCC-Ccc---cccc--cccce-eEEEEEeeccccc-cccc---
Confidence 99999986 8999999996311000011222 23333221 110 0000 00000 0000000000000 0000
Q ss_pred CCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCCCCCCCCc
Q 009392 346 PQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQ 425 (535)
Q Consensus 346 p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 425 (535)
. .. .+....-.|.|||+.|.
T Consensus 156 ~-------------~~-------~~~~~~d~~~ING~~~~---------------------------------------- 175 (318)
T 3g5w_A 156 E-------------GG-------IPGDVFDYYTINAKSFP---------------------------------------- 175 (318)
T ss_dssp C-------------CC-------CTTCCCCEEEETTBCBT----------------------------------------
T ss_pred c-------------CC-------CCCCcCcEEEEcCcCCC----------------------------------------
Confidence 0 00 00000114789987651
Q ss_pred cCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEE
Q 009392 426 TSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAI 505 (535)
Q Consensus 426 ~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~vi 505 (535)
....+.++.|++|+|+|.|.+ ...||||||||.|+|++.+.+. +.+|.+|||+.|++++++.|
T Consensus 176 ---~~~~l~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~dG~~-----------~~~p~~~dtv~l~pger~~v 238 (318)
T 3g5w_A 176 ---ETQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKDGFP-----------LDKPIKGDTVLIGPGERYDV 238 (318)
T ss_dssp ---SSCCEEECTTCEEEEEEEECS---SSCEEEEETTSCEEEEEETTEE-----------EEEEEEESEEEECTTCEEEE
T ss_pred ---CCccEEeCCCCEEEEEEEeCC---CceEEEEECCcEEEEEecCCcc-----------cCCCccccEEEECCCCEEEE
Confidence 012368899999999999976 4589999999999999986321 23688999999999999999
Q ss_pred CCCCCCCCCCeeeec
Q 009392 506 RXXXXXXXXAQIIQE 520 (535)
Q Consensus 506 rf~adnPG~w~~HCH 520 (535)
+|++||||.|+||||
T Consensus 239 ~~~a~~pG~w~~hCH 253 (318)
T 3g5w_A 239 ILNMDNPGLWMIHDH 253 (318)
T ss_dssp EEECCSCSEEEEEES
T ss_pred EEECCCCeeEEEEec
Confidence 999999999999999
No 42
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.91 E-value=1.6e-24 Score=219.44 Aligned_cols=205 Identities=13% Similarity=0.135 Sum_probs=144.6
Q ss_pred ceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCC-----------
Q 009392 206 GFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKT----------- 274 (535)
Q Consensus 206 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~----------- 274 (535)
.|+|++++|+++|+||+|..... ..+|.||..+. .+.||.++ +...|.|||++++.++++++
T Consensus 76 GP~I~v~~Gd~v~v~~~N~l~~~-~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~ 148 (343)
T 3cg8_A 76 GPLIEVNEGDTLHIEFTNTMDVR-ASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 148 (343)
T ss_dssp CCCEEEETTCEEEEEEEECSSSC-BCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCEEEEECCCEEEEEEEECCCCC-eeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCC
Confidence 38999999999999999999654 44888888776 68899874 34568999999999998762
Q ss_pred -CceeEEEeecCCCCC---cccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCccc
Q 009392 275 -SGKYLVAASPFMDAP---IAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVD 350 (535)
Q Consensus 275 -~g~y~i~~~~~~~~~---~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~ 350 (535)
.|.||++++...... .....+.+..|+.+.+.. . .|
T Consensus 149 ~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-------------------------------------~---pd 188 (343)
T 3cg8_A 149 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-------------------------------------L---PD 188 (343)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-------------------------------------C---CS
T ss_pred CceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-------------------------------------C---CC
Confidence 378989998532110 011122233333322100 0 12
Q ss_pred eEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCCCCCCCCccCCCc
Q 009392 351 HNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGT 430 (535)
Q Consensus 351 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (535)
+++.+.++ .|.|||+.|. +.
T Consensus 189 ~e~~l~~~-----------------d~~iNG~~~~-------------------------------------------~~ 208 (343)
T 3cg8_A 189 ATHTIVFN-----------------DMTINNRKPH-------------------------------------------TG 208 (343)
T ss_dssp EEEEEEEE-----------------TTEETTCCTT-------------------------------------------CC
T ss_pred ceEEEEcc-----------------cceecccCCC-------------------------------------------CC
Confidence 33333331 1578887541 02
Q ss_pred eeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCC-
Q 009392 431 KAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXX- 509 (535)
Q Consensus 431 ~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~a- 509 (535)
..+.++.|++|+|+|.|.+ .+.||||||||.|+|++. |.+.. ....+.||||+.|++++++.|+|++
T Consensus 209 ~~l~v~~Ge~vri~l~N~g---~~~HpfHlHGh~f~v~~~--G~~~~-------p~~~~~~~Dtv~v~PG~~~~v~~~~~ 276 (343)
T 3cg8_A 209 PDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTG-------PDDPSRVIDNKITGPADSFGFQIIAG 276 (343)
T ss_dssp CCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCS-------TTCCCCEESEEEECTTCEEEEEEETT
T ss_pred ccEEeCCCCEEEEEEEcCC---ccccccEecCcEEEEecc--CcccC-------CCCcccceeeEEeCCCCEEEEEEEEC
Confidence 2478999999999999976 579999999999999753 33221 1124679999999999999999994
Q ss_pred --CCCCCCeeeec------cCceeeeee
Q 009392 510 --XXXXXAQIIQE------YGLCIAIWK 529 (535)
Q Consensus 510 --dnPG~w~~HCH------~gm~~~~~~ 529 (535)
||||.|+|||| .|||..+-.
T Consensus 277 ~~~~pG~w~~HCHi~~H~~~GM~g~~~V 304 (343)
T 3cg8_A 277 EGVGAGAWMYHCHVQSHSDMGMVGLFLV 304 (343)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEE
T ss_pred CCCCCeeEEEeCCCHHHHhccCcEEEEE
Confidence 89999999999 888887644
No 43
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.89 E-value=1.4e-22 Score=201.38 Aligned_cols=206 Identities=16% Similarity=0.169 Sum_probs=142.4
Q ss_pred ceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCC------------
Q 009392 206 GFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADK------------ 273 (535)
Q Consensus 206 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~------------ 273 (535)
.|+|+++.|+++++++.|.... ..++|.+|..+. -+.||.++. .-.|.|||.+...++++.
T Consensus 57 GP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~ 129 (299)
T 3t9w_A 57 GPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEG 129 (299)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCC
Confidence 4999999999999999999754 456888887654 357887542 224789999999988763
Q ss_pred CCceeEEEeecCCCCCc---ccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCccc
Q 009392 274 TSGKYLVAASPFMDAPI---AVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVD 350 (535)
Q Consensus 274 ~~g~y~i~~~~~~~~~~---~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~ 350 (535)
.+|.||++++....... ....+.+ ++|... ... . ..|
T Consensus 130 ~~gt~~YH~H~~~~~~~~~~~~~GL~G-~liV~~-~~~------------------------------------~--~~d 169 (299)
T 3t9w_A 130 TAGYWHYHDHAMGTEHGTEGVLKGLYG-ALVVRR-QGD------------------------------------L--LPK 169 (299)
T ss_dssp CCEEEEEECSSSSSTTCHHHHHHTCEE-EEEEEC-TTC------------------------------------C--CCS
T ss_pred CceeEEEecCCcccccchhhhcccccc-eEEEec-ccc------------------------------------c--Ccc
Confidence 35999999985322110 0111122 222211 000 0 124
Q ss_pred eEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCCCCCCCCccCCCc
Q 009392 351 HNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGT 430 (535)
Q Consensus 351 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (535)
+.+.+.++ .|.+|++.+. +.
T Consensus 170 ~e~~l~~~-----------------~~~~Ng~~~~-------------------------------------------~~ 189 (299)
T 3t9w_A 170 RQFTVVFN-----------------DMMINNRAHH-------------------------------------------DA 189 (299)
T ss_dssp EEEEEEEE-----------------TTEETTCCTT-------------------------------------------CC
T ss_pred ccceeeee-----------------eeeecCcccc-------------------------------------------cc
Confidence 44444432 1567776431 12
Q ss_pred eeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCC---EEEECC
Q 009392 431 KAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGG---WVAIRX 507 (535)
Q Consensus 431 ~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g---~~virf 507 (535)
..+.++.|++|+|+|.|.+ ...||||||||.|+|+..+... .....+.++||+.|.++. +.+++|
T Consensus 190 p~l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~~---------~~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 190 PTFEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMRT---------SEYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp CEEEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSCC---------STTCCCCEESEEECCTTCEEEEEEETT
T ss_pred ccceecCCCEEEEEEEecc---ccceeeeEecceEEEEeccccc---------CCcCCCCceeeEEeCCceeEEEEEEEe
Confidence 3468899999999999975 5689999999999998886432 233456799999999874 568899
Q ss_pred CCCCCCCCeeeec------cCceeeeeec
Q 009392 508 XXXXXXXAQIIQE------YGLCIAIWKY 530 (535)
Q Consensus 508 ~adnPG~w~~HCH------~gm~~~~~~~ 530 (535)
++||||.|+|||| .|||..+-..
T Consensus 258 ~~dnPG~w~~HCHi~~H~~~GM~~~f~V~ 286 (299)
T 3t9w_A 258 EGVGPGMWMYHCHVQNHSDMGMAGMFLVR 286 (299)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEE
T ss_pred eCCCCeeEEEEcCCHHHHhcCCeEEEEEE
Confidence 9999999999999 8999887543
No 44
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.88 E-value=1.8e-22 Score=198.65 Aligned_cols=207 Identities=12% Similarity=0.106 Sum_probs=145.2
Q ss_pred ceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCC-----------
Q 009392 206 GFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKT----------- 274 (535)
Q Consensus 206 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~----------- 274 (535)
.|+|+++.|+++++++.|... ....+|.||..+.. +.||.+ +..-.|.||+++...++++++
T Consensus 35 GP~i~~~~Gd~v~v~~~N~~~-~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~ 107 (276)
T 3kw8_A 35 GPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 107 (276)
T ss_dssp CCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCC-CCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCccCCC
Confidence 399999999999999999974 45568888876643 578876 234568999999999999752
Q ss_pred -CceeEEEeecCCCCC---cccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCccc
Q 009392 275 -SGKYLVAASPFMDAP---IAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVD 350 (535)
Q Consensus 275 -~g~y~i~~~~~~~~~---~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~ 350 (535)
+|.||+|+|...... .....+.+ ++|.... .. + . .|
T Consensus 108 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G-~liV~~~-~~---------------------------~--------~---~d 147 (276)
T 3kw8_A 108 SAGYWHYHDHVVGTEHGTGGIRNGLYG-PVIVRRK-GD---------------------------V--------L---PD 147 (276)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEE-EEEEECT-TC---------------------------C--------C---CS
T ss_pred CCEEEEEecCccccccchhhhhCccEE-EEEEecC-CC---------------------------c--------c---cc
Confidence 589999998632110 00111222 2222110 00 0 0 14
Q ss_pred eEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCCCCCCCCccCCCc
Q 009392 351 HNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGT 430 (535)
Q Consensus 351 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (535)
+++.+.++ .|.|||+.|. ..
T Consensus 148 rE~~l~l~-----------------~~~iNG~~~~-------------------------------------------~~ 167 (276)
T 3kw8_A 148 ATHTIVFN-----------------DMTINNRKPH-------------------------------------------TG 167 (276)
T ss_dssp EEEEEEEE-----------------TTEETTCCTT-------------------------------------------CC
T ss_pred cceEEEec-----------------ccccceeccc-------------------------------------------CC
Confidence 44444332 1578987652 01
Q ss_pred eeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCC
Q 009392 431 KAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXX 510 (535)
Q Consensus 431 ~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~ad 510 (535)
..+.++.|++|+|+|.|.+ .+.||||||||.|+|++. |.++.. ...+.+|||+.|++++.+.++|+++
T Consensus 168 p~i~v~~G~~vri~l~N~~---~~~Hp~HlHG~~f~v~~~--G~~~~p-------~~~~~~~Dtv~v~pg~~~~~~~~~~ 235 (276)
T 3kw8_A 168 PDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTGP-------DDPSRVIDNKITGPADSFGFQIIAG 235 (276)
T ss_dssp CCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCST-------TCCCCEESEEEECTTCEEEEEEETT
T ss_pred CCEEEecCCEEEEEEecCC---CcceeEEEccceeEEecc--CccCCC-------cccccCCccEEeCCCceEEEEEEec
Confidence 2468999999999999976 469999999999999764 333211 1235799999999999998888876
Q ss_pred ---CCCCCeeeec------cCceeeeeecc
Q 009392 511 ---XXXXAQIIQE------YGLCIAIWKYT 531 (535)
Q Consensus 511 ---nPG~w~~HCH------~gm~~~~~~~~ 531 (535)
|||.|+|||| .|||..|-...
T Consensus 236 ~~~npG~w~~HCH~~~H~~~GM~g~~~V~~ 265 (276)
T 3kw8_A 236 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKK 265 (276)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEEC
T ss_pred cCCCCCeEEEECCCchHhhCCCeEEEEEeC
Confidence 8999999999 89998876554
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.87 E-value=1.3e-21 Score=195.87 Aligned_cols=206 Identities=12% Similarity=0.087 Sum_probs=140.7
Q ss_pred ceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCC------------
Q 009392 206 GFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADK------------ 273 (535)
Q Consensus 206 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~------------ 273 (535)
.|+|+++.|++++++|.|.... ...+|.||..+. -+.||.+. ..-.|.|||.+...+++..
T Consensus 41 GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~-~~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~ 113 (313)
T 3tas_A 41 GPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYE-ISSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTWRAG 113 (313)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCCC-CccEeecCCcCC-ccCCCCcc-----ccCCcCCCCEEEEEEEeccCCccccccccCC
Confidence 4899999999999999999754 455888887554 25688754 1224889999999887653
Q ss_pred CCceeEEEeecCCCCCc---ccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCccc
Q 009392 274 TSGKYLVAASPFMDAPI---AVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVD 350 (535)
Q Consensus 274 ~~g~y~i~~~~~~~~~~---~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~ 350 (535)
..|.||.|||....... ....+.+.-|+. .... ...|
T Consensus 114 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~--~~~~--------------------------------------~~~d 153 (313)
T 3tas_A 114 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVR--RKGD--------------------------------------VLPD 153 (313)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEE--CTTC--------------------------------------BCCS
T ss_pred CceEEEEeecCcccccchhhhhccccCceEee--cccc--------------------------------------cccc
Confidence 24899999985322110 011122222221 1000 0124
Q ss_pred eEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCCCCCCCCccCCCc
Q 009392 351 HNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGT 430 (535)
Q Consensus 351 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 430 (535)
+.+.+.++ .|.+|+..+. ..
T Consensus 154 ~e~~l~~~-----------------d~t~Ng~~~~-------------------------------------------~~ 173 (313)
T 3tas_A 154 RTHTIVFN-----------------DMTINNRPAH-------------------------------------------TG 173 (313)
T ss_dssp EEEEEEEE-----------------TTEETTCCTT-------------------------------------------CC
T ss_pred ccceeecc-----------------chhcccCCcc-------------------------------------------cc
Confidence 44444432 1567765431 11
Q ss_pred eeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEE---EECC
Q 009392 431 KAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWV---AIRX 507 (535)
Q Consensus 431 ~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~---virf 507 (535)
..+.++.|++|+|+|.|.+ ...||||||||.|+|++.+... .....|.++||+.|.+++.+ ++++
T Consensus 174 ~~l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~~---------~~~~~~~~~Dtv~l~Pger~~v~v~a~ 241 (313)
T 3tas_A 174 PDFEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGMLT---------GPDDPSQVIDNKICGPADSFGFQVIAG 241 (313)
T ss_dssp CCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSCC---------STTCCCCEESEEEECTTCEEEEEEETT
T ss_pred cccccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCcc---------CCCCCCeeeeEEEeCCCcceEEEEEec
Confidence 2368889999999999976 5789999999999999876321 12346889999999998654 6777
Q ss_pred CCCCCCCCeeeec------cCceeeeeec
Q 009392 508 XXXXXXXAQIIQE------YGLCIAIWKY 530 (535)
Q Consensus 508 ~adnPG~w~~HCH------~gm~~~~~~~ 530 (535)
+++|||.|+|||| .|||..+-..
T Consensus 242 ~~~nPG~w~~HCHi~~H~~~GM~~~f~V~ 270 (313)
T 3tas_A 242 EGVGAGAWMYHCHVQSHSDMGMVGLFLVK 270 (313)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEE
T ss_pred cCCCCEeEEEEeCChHHHHCCCeEEEEEE
Confidence 8999999999999 8999887543
No 46
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.80 E-value=1.8e-20 Score=187.14 Aligned_cols=227 Identities=14% Similarity=0.063 Sum_probs=129.3
Q ss_pred eEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccc----eeEeceEEeCCCc
Q 009392 188 SHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVK----PFKTDNIVIAPGQ 263 (535)
Q Consensus 188 ~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~l~l~pGe 263 (535)
..++||.++ |+|++++|+++|+|++|... ....+|.||..+. .+.||.+.. +...+...|.|||
T Consensus 51 ~~~~n~~pG----------P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~ 118 (306)
T 1sdd_A 51 QSRTSGLLG----------PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQ 118 (306)
T ss_dssp CCSSCCSCC----------CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTC
T ss_pred ccccCCccC----------CEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCC
Confidence 345788776 89999999999999999874 4556777776632 257888752 2334467899999
Q ss_pred eEEEEEEeCCCC---------ceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccc
Q 009392 264 TTNVLLSADKTS---------GKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLR 334 (535)
Q Consensus 264 R~dv~v~~~~~~---------g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 334 (535)
|+++.+++++.+ |+||+|+|..... .....+. .++|.+........ +..+.. +...... +.
T Consensus 119 ~~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~-q~~~GL~-G~liV~~~~~~~~~---~~~~~~-d~e~~l~----~~ 188 (306)
T 1sdd_A 119 EYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVE-DFNSGLI-GPLLICKKGTLTED---GTQKMF-EKQHVLM----FA 188 (306)
T ss_dssp EEEEEEECCGGGSCCSSSCSEEEEEEECCSSSHH-HHHTTCC-EEEEEECTTCBCTT---SSBSSS-CCCCCCB----CC
T ss_pred eEEEEEEeCCccCCCCCCCCceEEEEeccCCchh-hhccCce-EEEEEccCCCCCcc---CCcCcc-cceEEEE----EE
Confidence 999999998743 6999999952210 0012233 34554432211000 000000 0000000 00
Q ss_pred cccCCCCCCCCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCcc
Q 009392 335 SLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHT 414 (535)
Q Consensus 335 ~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~ 414 (535)
+ +.-..... . . ..-.+.|||+.+..
T Consensus 189 ---------------d----~d~~~~~~------~-~-~~~~~~ING~~~~~---------------------------- 213 (306)
T 1sdd_A 189 ---------------V----FDESKSWN------Q-T-SSLMYTVNGYVNGT---------------------------- 213 (306)
T ss_dssp ---------------E----EETTSSSS------C-C-CCEEECSSSCCSSC----------------------------
T ss_pred ---------------e----cccccccc------c-C-CCcceeeCCEecCC----------------------------
Confidence 0 00000000 0 0 11236788865410
Q ss_pred ccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccce
Q 009392 415 YNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNT 494 (535)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDT 494 (535)
...+.++.|++++|.|.|.+. ....||||||||.|++ .| .++||
T Consensus 214 ---------------~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~----dG----------------~~~dt 257 (306)
T 1sdd_A 214 ---------------MPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ----NH----------------HKISA 257 (306)
T ss_dssp ---------------CCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEE----TT----------------EECSC
T ss_pred ---------------CcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee----CC----------------EEcce
Confidence 012456789999999999762 1257999999999986 12 35899
Q ss_pred EEeCCCCEEEECCCCCCCCCCeeeec------cCceeee
Q 009392 495 IGVPSGGWVAIRXXXXXXXXAQIIQE------YGLCIAI 527 (535)
Q Consensus 495 v~vp~~g~~virf~adnPG~w~~HCH------~gm~~~~ 527 (535)
+.|.+++.+.|+|++++||.|+|||| .||+..+
T Consensus 258 v~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~ 296 (306)
T 1sdd_A 258 ITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYI 296 (306)
T ss_dssp CCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC
T ss_pred EEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEE
Confidence 99999999999999999999999999 6777654
No 47
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.80 E-value=2.5e-19 Score=180.47 Aligned_cols=230 Identities=14% Similarity=0.099 Sum_probs=145.4
Q ss_pred ceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCC-ceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceE
Q 009392 187 DSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALN-EELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTT 265 (535)
Q Consensus 187 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~ 265 (535)
..+++||+.. .|+|++++|+++|+|++|.... ..+.+|+||.. +.||... ...|.|||++
T Consensus 59 ~~~~~ng~~p---------gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~ 119 (327)
T 1kbv_A 59 RYWTFDGDVP---------GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTS 119 (327)
T ss_dssp EEEEETTBSS---------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEE
T ss_pred EEEEECCccC---------CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEE
Confidence 5799999842 3899999999999999999753 45668888763 5788652 2249999999
Q ss_pred EEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCC
Q 009392 266 NVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKV 345 (535)
Q Consensus 266 dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 345 (535)
++.+++++ +|+||+|||........... ...+++.+.. .. .|..++.. ...+ .+.. .. .... .
T Consensus 120 ~y~f~~~~-~Gt~wyH~h~~~~~~~~~~G-l~G~~iV~~~-~~--------~p~~d~e~-~l~~-~d~~-~~-~~~~--~ 182 (327)
T 1kbv_A 120 TFSFKALQ-PGLYIYHCAVAPVGMHIANG-MYGLILVEPK-EG--------LPKVDKEF-YIVQ-GDFY-TK-GKKG--A 182 (327)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHHHHHTT-CEEEEEEECT-TC--------CCCCSEEE-EEEE-EEEC-BS-SCTT--C
T ss_pred EEEEECCC-CeEEEEEeCCCChhhhhhcc-eEEEEEEecC-CC--------CCCCceEE-EEEe-eeee-cc-Cccc--c
Confidence 99999997 89999999853211001112 2234444432 11 11111111 0000 0000 00 0000 0
Q ss_pred CCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCCCCCCCCc
Q 009392 346 PQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQ 425 (535)
Q Consensus 346 p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 425 (535)
+ ... ..+... ..+..+. .+.|||+.+..-
T Consensus 183 ~----g~~--~~~~~~-----~~~~~~~--~~~iNG~~~~~~-------------------------------------- 211 (327)
T 1kbv_A 183 Q----GLQ--PFDMDK-----AVAEQPE--YVVFNGHVGALT-------------------------------------- 211 (327)
T ss_dssp C----EEE--CBCHHH-----HHHTCCS--EEEETTSTTTTS--------------------------------------
T ss_pred c----ccc--ccChhH-----hccCCCc--eEEEcCcccCCC--------------------------------------
Confidence 0 000 000000 0000111 356787644100
Q ss_pred cCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEE
Q 009392 426 TSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAI 505 (535)
Q Consensus 426 ~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~vi 505 (535)
....+.++.|++++|.|.|.+ ....|+||||||.|+|++.+.+. ..|.++||+.|.+++.+.|
T Consensus 212 ---~~~~l~v~~G~~vRlRliN~~--~~~~~~~~l~Gh~f~vi~~DG~~------------~~p~~~d~l~l~pGer~dv 274 (327)
T 1kbv_A 212 ---GDNALKAKAGETVRMYVGNGG--PNLVSSFHVIGEIFDKVYVEGGK------------LINENVQSTIVPAGGSAIV 274 (327)
T ss_dssp ---GGGCEEEETTEEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGSS------------CEECSBSEEEECTTEEEEE
T ss_pred ---CceeEEeCCCCEEEEEEECCC--CCCceeEEEeCCEEEEEEcCCCc------------CCCCceeEEEECCCCEEEE
Confidence 013568999999999999975 24689999999999999987442 2378899999999999999
Q ss_pred CCCCCCCCCCeeeec
Q 009392 506 RXXXXXXXXAQIIQE 520 (535)
Q Consensus 506 rf~adnPG~w~~HCH 520 (535)
.|++++||.|.+|||
T Consensus 275 ~v~~~~pG~y~l~~h 289 (327)
T 1kbv_A 275 EFKVDIPGNYTLVDH 289 (327)
T ss_dssp EEEECSCEEEEEEES
T ss_pred EEEeCCCeEEEEEec
Confidence 999999999999999
No 48
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.76 E-value=4.6e-17 Score=170.92 Aligned_cols=222 Identities=13% Similarity=0.120 Sum_probs=152.6
Q ss_pred eEEEEEEEEEEeeecc-----------CCceeEEEECCCCCCcEEEEecCCEEEEEEEECCC-CCceEEe-CCcccCCCC
Q 009392 23 VRHYKFNVVMKNSTKL-----------CSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-YNVTIHW-HGVRQLRTG 89 (535)
Q Consensus 23 ~~~~~l~~~~~~~~~~-----------g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-~~t~iH~-HG~~~~~~~ 89 (535)
.+++.|.+++-....+ |.....+++||+. .|+|+|++| ++|+||.|... ....+|+ ||....-..
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 4567777776544433 3345789999995 699999999 99999999985 5688999 886654332
Q ss_pred CCCCCCC-----cccCcCCCCCeEEEEEEeCCCCcceeEecChhhhhccc-E------------EEEEEeCCCCC-----
Q 009392 90 WADGPAY-----ITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRATV-H------------GAIVILPKRGV----- 146 (535)
Q Consensus 90 ~~DGvp~-----~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~Gl-~------------G~iiV~~~~~~----- 146 (535)
.||.+- +++..|.|||++++.+++ .+.|+||++++......|+ . ..+-.......
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~ 307 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD 307 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccc
Confidence 798642 456789999999999998 5789999999865432221 1 11111111000
Q ss_pred CCCC-----C----CCCceEEEEEEeeccCChHHHHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEE
Q 009392 147 PYPF-----P----KPHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTY 217 (535)
Q Consensus 147 ~~~~-----~----~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~ 217 (535)
..|. . ..+.+..+.+. ..++|||+.+.. ..+.+.++.|+++
T Consensus 308 ~~p~~L~~~~~~~~~~~~~~~~~l~------------------------~~~~iNg~~f~~------~~~~~~~~~G~~~ 357 (451)
T 2uxt_A 308 SLPMRLLPTEIMAGSPIRSRDISLG------------------------DDPGINGQLWDV------NRIDVTAQQGTWE 357 (451)
T ss_dssp CCCSCSSSSCCCCCCCSEEEEEEEC------------------------SSSSBTTBCCCT------TCCCEEEETTCEE
T ss_pred cCccccCCCCCCCCCCcceEEEEEe------------------------eEEEECCEeCCC------CCCcEEcCCCCEE
Confidence 0000 0 00000111110 047799997521 2356899999999
Q ss_pred EEEEEEcCCCceEEEEEcCceeEEEEeCCccc---ceeEeceEEeCCCceEEEEEEeCCCCce----eEEEeec
Q 009392 218 MLRIINAALNEELFFKIAGHKLTVVEVDATYV---KPFKTDNIVIAPGQTTNVLLSADKTSGK----YLVAASP 284 (535)
Q Consensus 218 rlRliN~~~~~~~~~~i~gh~~~via~DG~~v---~P~~~d~l~l~pGeR~dv~v~~~~~~g~----y~i~~~~ 284 (535)
+|+|+|. ..+.||||||.|+|++.||.+. +|...|++.| |+++.|.+++++ ||. |.+|||.
T Consensus 358 ~~~l~N~---~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dn-pg~~~g~w~~HCHi 425 (451)
T 2uxt_A 358 RWTVRAD---EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQ-PSWAHFPFYFNSQT 425 (451)
T ss_dssp EEEEEEE---EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCS-CCBTTBCEEEEESS
T ss_pred EEEEECC---CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCC-CCCCCCceEEeCCc
Confidence 9999998 3567999999999999999875 4789999999 999999999997 566 9999995
No 49
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.76 E-value=2.6e-18 Score=188.85 Aligned_cols=237 Identities=14% Similarity=0.143 Sum_probs=135.5
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccc---e-eEeceEEeCCCceEEEEEEeCCC-----Cc-
Q 009392 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVK---P-FKTDNIVIAPGQTTNVLLSADKT-----SG- 276 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~---P-~~~d~l~l~pGeR~dv~v~~~~~-----~g- 276 (535)
|+|+++.|+++++||.|.... ...+|.||.... .+.||.+.. | ..+....|.|||+++..+++++. +|
T Consensus 69 P~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~ 146 (647)
T 1sdd_B 69 PVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGS 146 (647)
T ss_dssp CCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSSC
T ss_pred ceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCC
Confidence 999999999999999999854 455777776654 578998742 2 23346689999999999999874 47
Q ss_pred ---eeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCccceEE
Q 009392 277 ---KYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNL 353 (535)
Q Consensus 277 ---~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~ 353 (535)
+||+|+|..... .....+ ..++|........... ..|. .+......+. .+...... . ........+
T Consensus 147 ~c~T~wYHsH~~~~~-q~~~GL-~G~lIV~~~~~~~~~~---~~~~-~~~e~~l~l~-~~d~~~~w--~--~~~~~~~~~ 215 (647)
T 1sdd_B 147 ACRAWAYYSAVNPEK-DIHSGL-IGPLLICRKGTLDKET---NMPV-DMREFVLLFM-VFDEKKSW--Y--YDKKPTRSW 215 (647)
T ss_dssp SEEEEEEECCSSHHH-HHTTTC-EEEEEEECTTSSCTTS---CCCS-SCCEEEEEEE-EEEGGGSS--C--CC-------
T ss_pred CceEEEEccCCCCcc-cccccC-ccCEEEeeCCCccccc---CCCC-cceeEEEEEE-eecCcccc--c--cccCccccc
Confidence 999999963210 001222 2344443322111000 0111 1111111110 00000000 0 000000000
Q ss_pred E-EEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCCCCCCCCccCCCcee
Q 009392 354 L-FTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQTSNGTKA 432 (535)
Q Consensus 354 ~-l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 432 (535)
. ....+ ....-.+.|||+.+. ...
T Consensus 216 ~~~~~~~-----------~~~~~~~~iNG~~~~--------------------------------------------~p~ 240 (647)
T 1sdd_B 216 RRASSEV-----------KNSHEFHAINGMIYN--------------------------------------------LPG 240 (647)
T ss_dssp -------------------CCCEEEEETTBSSC--------------------------------------------CCC
T ss_pred ccCCcch-----------hhcCceeccCCEecC--------------------------------------------CCC
Confidence 0 00000 001124678876541 113
Q ss_pred EEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCCC
Q 009392 433 YRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXXX 512 (535)
Q Consensus 433 ~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adnP 512 (535)
+.++.|++|+|.|.|.+. ....||||+|||.|+|++.+ +.++||+.|++++.+.|+|++++|
T Consensus 241 l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~d-----------------~~~~d~v~l~pg~r~~v~~~~~~p 302 (647)
T 1sdd_B 241 LRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGTQ-----------------QHQLGVWPLLPGSFKTLEMKASKP 302 (647)
T ss_dssp CEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSSS-----------------CEEESSEEECTTEEEEEEEECCSS
T ss_pred eEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecCC-----------------CcccceEEECCCeEEEEEEEeccc
Confidence 578899999999999752 13489999999999998652 458999999999999999999999
Q ss_pred CCCeeeec------cCceeeeee
Q 009392 513 XXAQIIQE------YGLCIAIWK 529 (535)
Q Consensus 513 G~w~~HCH------~gm~~~~~~ 529 (535)
|.|+|||| .||+..+-.
T Consensus 303 G~w~~hch~~~h~~~Gm~~~~~V 325 (647)
T 1sdd_B 303 GWWLLDTEVGEIQRAGMQTPFLI 325 (647)
T ss_dssp EEEEEECCCHHHHTTTCEEEEEE
T ss_pred eEeecccCcccccccccccceee
Confidence 99999999 788887654
No 50
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.75 E-value=7.3e-17 Score=169.15 Aligned_cols=230 Identities=17% Similarity=0.156 Sum_probs=162.2
Q ss_pred eEEEEEEEEEEeeec------------cCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCC-CCceEEeCCcccCCCC
Q 009392 23 VRHYKFNVVMKNSTK------------LCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-YNVTIHWHGVRQLRTG 89 (535)
Q Consensus 23 ~~~~~l~~~~~~~~~------------~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~~~~~~~ 89 (535)
.+++.|.+++-.... .|.....+++||+. .|.|+|++| ++++|+.|... ....+|++|.......
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~ 223 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIA 223 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEE
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEe
Confidence 466777666543321 24456789999996 699999999 99999999985 4688999997654432
Q ss_pred CCCCCCC-----cccCcCCCCCeEEEEEEeCCCCcceeEecChhhhh----ccc--------------EEEEE--EeCCC
Q 009392 90 WADGPAY-----ITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLR----ATV--------------HGAIV--ILPKR 144 (535)
Q Consensus 90 ~~DGvp~-----~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~----~Gl--------------~G~ii--V~~~~ 144 (535)
.||.+- +....|.|||+++..+++ +++|.||++++..... .|| ....+ +..+.
T Consensus 224 -~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 224 -ADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp -ETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred -cCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 688652 345668999999999998 5699999999742211 122 12222 22221
Q ss_pred CCCCCCCC----------CCceEEEEEEeeccCChHHHHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCC
Q 009392 145 GVPYPFPK----------PHKEVVVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSG 214 (535)
Q Consensus 145 ~~~~~~~~----------~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G 214 (535)
. ..+.+. ...+..+.+.--. .+..+.|||+.+.. ..+.+.++.|
T Consensus 302 ~-~~~~p~~l~~~~~l~~~~~~r~~~l~~~~-------------------~g~~~~iNg~~~~~------~~~~~~~~~g 355 (439)
T 2xu9_A 302 K-PLPLPKALSPFPTLPAPVVTRRLVLTEDM-------------------MAARFFINGQVFDH------RRVDLKGQAQ 355 (439)
T ss_dssp C-CCCCCSCCCCCCCCCCCSEEEEEEEEEEG-------------------GGTEEEETTBCCCT------TCCCEEECTT
T ss_pred c-cccCcccCCCcccCCCCCcceEEEEEeec-------------------cCceEeECCEECCC------CCCceecCCC
Confidence 1 111110 0111122221100 01368999997521 1245899999
Q ss_pred CEEEEEEEEcCCCceEEEEEcCceeEEEEeCCccc-ceeEeceEEeCCCceEEEEEEeCCCCceeEEEeec
Q 009392 215 KTYMLRIINAALNEELFFKIAGHKLTVVEVDATYV-KPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 215 ~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v-~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
++++|+|.|.+... +.||||||.|+|++.+|... .|...|++.|.||+++.+.+++++ ||.|.+|||.
T Consensus 356 ~~~~~~~~N~~~~~-HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adn-pG~w~~HCHi 424 (439)
T 2xu9_A 356 TVEVWEVENQGDMD-HPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLRE-KGRTVFHCHI 424 (439)
T ss_dssp CEEEEEEEECSSSC-EEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECCS-CEEEEEEESS
T ss_pred CEEEEEEEcCCCCC-CCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCC-CCCEEEECCc
Confidence 99999999998655 45999999999999999876 688999999999999999999987 8999999995
No 51
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.75 E-value=1.6e-17 Score=168.45 Aligned_cols=252 Identities=13% Similarity=0.103 Sum_probs=139.4
Q ss_pred CceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCC-CceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCce
Q 009392 186 SDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAAL-NEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQT 264 (535)
Q Consensus 186 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR 264 (535)
...+++||+.. .|+|++++|+++|+|++|... ...+.+++++... +.||..+ . .|.|||+
T Consensus 59 ~~~~~~ng~~p---------gP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~---~----~i~PG~~ 119 (340)
T 2bw4_A 59 IHAMTFNGSVP---------GPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL---T----QVNPGEE 119 (340)
T ss_dssp EEEEEETTBSS---------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG---C----CBCTTEE
T ss_pred EEEEEECCCCC---------CCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc---e----EeCCCCE
Confidence 36799999841 289999999999999999973 2344566766542 2233222 1 3999999
Q ss_pred EEEEEEeCCCCceeEEEeecCCCC-CcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCC
Q 009392 265 TNVLLSADKTSGKYLVAASPFMDA-PIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPA 343 (535)
Q Consensus 265 ~dv~v~~~~~~g~y~i~~~~~~~~-~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~ 343 (535)
+++.+++++ +|+||+|||..... ........ .+++.+...........+. .. +......+.+-...........
T Consensus 120 ~~y~~~~~~-~Gt~wyH~h~~~~~~~~~~~Gl~-G~~iV~~~~~~~~~~~~p~--~~-d~e~~l~l~D~~~~~~~~g~~~ 194 (340)
T 2bw4_A 120 TTLRFKATK-PGVFVYHCAPEGMVPWHVTSGMN-GAIMVLPRDGLKDEKGQPL--TY-DKIYYVGEQDFYVPKDEAGNYK 194 (340)
T ss_dssp EEEEEECCS-CEEEEEECCCTTCHHHHHHTTCE-EEEEEECTBCEECTTSCEE--CC-SEEEEEEEEEECCCBCTTSCBC
T ss_pred EEEEEECCC-CeEEEEEcCCCCchhhHHhCcCE-EEEEEccCcCcccccCCCc--Cc-ceeEEEeeeeeeeccccCCccc
Confidence 999999997 89999999953210 00112222 3344333211000000000 00 0000000000000000000000
Q ss_pred CCCCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCCCCCCC
Q 009392 344 KVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKN 423 (535)
Q Consensus 344 ~~p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 423 (535)
........ . .-.... ..+..+ -.+.|||+.+...
T Consensus 195 ~~~~~~~~-~--~~~~~~-----~~~~~~--~~~~iNG~~~~~~------------------------------------ 228 (340)
T 2bw4_A 195 KYETPGEA-Y--EDAVKA-----MRTLTP--THIVFNGAVGALT------------------------------------ 228 (340)
T ss_dssp CCCSHHHH-H--HHHHHH-----HHTTCC--SEEEETTSTTTTS------------------------------------
T ss_pred cccccccc-c--cchhhH-----hhcCCC--CEEEECCccCCcc------------------------------------
Confidence 00000000 0 000000 000011 1356777644110
Q ss_pred CccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCC--ccceEEeCCCC
Q 009392 424 LQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPV--ERNTIGVPSGG 501 (535)
Q Consensus 424 ~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~--~RDTv~vp~~g 501 (535)
....+.++.|++++|++.|.+ ...|++|+|||.|+|++. |.+ .+++ ++||+.|++++
T Consensus 229 -----~~~~l~v~~G~r~Rl~n~~~~---~~~~~~~i~gh~~~Vi~d--G~~-----------~~~p~~~~dtv~l~pGe 287 (340)
T 2bw4_A 229 -----GDHALTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWAT--GKF-----------RNPPDLDQETWLIPGGT 287 (340)
T ss_dssp -----GGGCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCT-----------TSCCEEEESCCCBCTTE
T ss_pred -----CCCceEcCCCCEEEEEECCCC---CccceEEecCcceEEeCC--Ccc-----------cCCccccceEEEeCCCc
Confidence 023478899999998877754 467899999999999863 321 2333 47999999999
Q ss_pred EEEECCCCCCCCCCeeeec-------cCceeeee
Q 009392 502 WVAIRXXXXXXXXAQIIQE-------YGLCIAIW 528 (535)
Q Consensus 502 ~~virf~adnPG~w~~HCH-------~gm~~~~~ 528 (535)
.+.|.|++++||.|+|||| .|||..|-
T Consensus 288 r~~v~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~ 321 (340)
T 2bw4_A 288 AGAAFYTFRQPGVYAYVNHNLIEAFELGAAGHFK 321 (340)
T ss_dssp EEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEE
T ss_pred eEEEEEECCCCeeeEEEcCchHHHHhCCCEEEEE
Confidence 9999999999999999998 47776543
No 52
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.73 E-value=1.5e-18 Score=192.29 Aligned_cols=231 Identities=10% Similarity=0.080 Sum_probs=139.5
Q ss_pred ceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCC---------CCc
Q 009392 206 GFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADK---------TSG 276 (535)
Q Consensus 206 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~---------~~g 276 (535)
.|+|+++.|+++++++.|... ....+|.||..+..-.-||.+- ....|.||++++..+++++ .+|
T Consensus 198 GP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 198 GPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 389999999999999999975 4556788877655444357642 2346899999999999884 479
Q ss_pred eeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCccccccc---c--------cccccccCCCCCCCC
Q 009392 277 KYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKF---I--------DSLRSLNSKKYPAKV 345 (535)
Q Consensus 277 ~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~---~--------~~l~~l~~~~~p~~~ 345 (535)
.||.|+|..... .....+. .+++.... ..... . ..+...+......+ . ..++.... .|..+
T Consensus 272 t~wYHsh~~~~~-q~~~GL~-G~liV~~~-~~~~~-~--~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~~--~p~~~ 343 (770)
T 2r7e_B 272 AWAYSSDVDLEK-DVHSGLI-GPLLVCHT-NTLNP-A--HGRQVTVQEFALFFTIFDETKSWYFTENMERNCR--APCNI 343 (770)
T ss_dssp EEEECCCSSSSH-HHHTSCC-EEEEEECS-TTSCS-S--SCCCCSSEEEECCCCEECCSSSSCTTGGGSSCSC--CSSCC
T ss_pred eEEeeccCCcHH-HHhCCce-eeEEECCC-ccccc-c--cCCCccceEEEEEEeecCccccchhccchhhccc--Ccccc
Confidence 999999963210 0112222 33333222 11100 0 00000010000000 0 00000000 00000
Q ss_pred CCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCCCCCCCCc
Q 009392 346 PQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQ 425 (535)
Q Consensus 346 p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 425 (535)
+. .+. .+. .. .-.+.|||+.|.
T Consensus 344 ~~-~d~------~~~----------~~-~~~~~ING~~~~---------------------------------------- 365 (770)
T 2r7e_B 344 QM-EDP------TFK----------EN-YRFHAINGYIMD---------------------------------------- 365 (770)
T ss_dssp CS-SSS------SST----------TT-SCEECTTSCTTT----------------------------------------
T ss_pred cc-CCc------ccc----------cc-CCccccCCccCC----------------------------------------
Confidence 00 000 000 00 112556665431
Q ss_pred cCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEE
Q 009392 426 TSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAI 505 (535)
Q Consensus 426 ~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~vi 505 (535)
+...+.++.|++|+|.|.|.+. ....||||||||.|+|++.+ | .++||+.|++++++.|
T Consensus 366 ---~~~~l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-g----------------~~~Dtv~l~Pg~~~~v 424 (770)
T 2r7e_B 366 ---TLPGLVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-E----------------YKMALYNLYPGVFETV 424 (770)
T ss_dssp ---TCCCCCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-C----------------CEESEEECCTTCCCEE
T ss_pred ---CCCCeEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-C----------------ceeeEEEECCCeEEEE
Confidence 1123467899999999999752 23589999999999998864 1 2899999999999999
Q ss_pred CCCCCCCCCCeeeec------cCceeeeee
Q 009392 506 RXXXXXXXXAQIIQE------YGLCIAIWK 529 (535)
Q Consensus 506 rf~adnPG~w~~HCH------~gm~~~~~~ 529 (535)
+|++|+||.|+|||| .|||..+-.
T Consensus 425 ~~~ad~pG~w~~hcH~~~H~~~GM~~~~~V 454 (770)
T 2r7e_B 425 EMLPSKAGIWRVECLIGEHLHAGMSTLFLV 454 (770)
T ss_dssp EECCSSCBCCCBCCCSHHHHTTBCCCCCCB
T ss_pred EEEeCCCCceEEEecccccccccccccccc
Confidence 999999999999999 888877644
No 53
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.69 E-value=2.8e-16 Score=158.85 Aligned_cols=82 Identities=12% Similarity=0.139 Sum_probs=63.1
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCC--ccceEEeCCCCEEEECCCC
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPV--ERNTIGVPSGGWVAIRXXX 509 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~--~RDTv~vp~~g~~virf~a 509 (535)
.+.++.|++++|++.|.+ ...|++++|||.|+|++ . |.+ ..++ ++||+.|++++.+.|.|++
T Consensus 226 ~l~v~~Ger~Rl~n~~~~---~~~~~h~i~~h~~~Vi~-d-G~~-----------~~~p~~~~dtv~l~pGer~~v~v~a 289 (333)
T 1mzy_A 226 ALKAKVGDNVLFVHSQPN---RDSRPHLIGGHGDLVWE-T-GKF-----------HNAPERDLETWFIRGGTAGAALYKF 289 (333)
T ss_dssp CEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEET-T-CCT-----------TSCCEEEESBCCBCTTEEEEEEEEC
T ss_pred ceEecCCCEEEEEECCCC---CccccEEECCCCeEEEe-C-Ccc-----------cCCCccCcceEEECCCceEEEEEEc
Confidence 468899999998877643 23445557889899987 3 432 1232 6899999999999999999
Q ss_pred CCCCCCeeeec-------cCceeeeee
Q 009392 510 XXXXXAQIIQE-------YGLCIAIWK 529 (535)
Q Consensus 510 dnPG~w~~HCH-------~gm~~~~~~ 529 (535)
++||.|+|||| .|||..|-.
T Consensus 290 ~~pG~y~~~ch~~~h~~~~Gm~~~~~v 316 (333)
T 1mzy_A 290 LQPGVYAYVNHNLIEAVHKGATAHVLV 316 (333)
T ss_dssp CSCEEEEEEESSHHHHHTTCCEEEEEE
T ss_pred CCCEEEEEecChhhhHhhCCCEEEEEE
Confidence 99999999999 588876543
No 54
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.68 E-value=3.1e-16 Score=164.79 Aligned_cols=230 Identities=12% Similarity=0.072 Sum_probs=143.0
Q ss_pred ceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCC-ceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceE
Q 009392 187 DSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALN-EELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTT 265 (535)
Q Consensus 187 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~ 265 (535)
..+++||+.. .|+|+++.|++++||+.|.... ..+.+|+||+. ..||... ...|.||+++
T Consensus 49 ~~~~~ng~~p---------gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~ 109 (442)
T 2zoo_A 49 VFWSFGETVP---------GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTS 109 (442)
T ss_dssp EEEEETTBSS---------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEE
T ss_pred EEEEECCcCC---------CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEE
Confidence 5799999851 3899999999999999999642 45668999875 3677642 2358999999
Q ss_pred EEEEEeCCCCceeEEEeecCCCCCcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCC
Q 009392 266 NVLLSADKTSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAKV 345 (535)
Q Consensus 266 dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 345 (535)
++.+++++ +|.||+|||........... ..+.|.+..... .|..+.. ....+.+ .. +. .... .
T Consensus 110 ~y~f~~~~-~Gt~~yH~H~~~~~~~~~~G--l~G~~iv~~~~~--------~~~~d~e-~~l~l~d-~~-~~-~~~~--~ 172 (442)
T 2zoo_A 110 TFNFKALN-PGLYIYHCATAPVGMHIANG--MYGLILVEPKEG--------LAPVDRE-YYLVQGD-FY-TK-GEFG--E 172 (442)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHHHHHTT--CEEEEEEECTTC--------CCCCSEE-EEEEEEE-EC-BS-SCTT--C
T ss_pred EEEEEcCC-CeEEEEecCCCChHHHHhCc--cEEEEEEeCCCC--------CCCCCce-EEEEeee-ee-cc-Cccc--c
Confidence 99999987 89999999742111000111 223333332111 1111110 0000000 00 00 0000 0
Q ss_pred CCccceEEEEEeecCcCCCCCccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccccCCCCCCCccccCCCCCCCCc
Q 009392 346 PQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGTPKNLQ 425 (535)
Q Consensus 346 p~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 425 (535)
+ ... ..+... ..+... -.+.|||+.+...
T Consensus 173 ~----~~~--~~~~~~-----~~~~~~--~~~liNG~~~~~~-------------------------------------- 201 (442)
T 2zoo_A 173 A----GLQ--PFDMAK-----AIDEDA--DYVVFNGSVGSTT-------------------------------------- 201 (442)
T ss_dssp C----EEE--CBCHHH-----HHTTCC--SEEEETTSTTTTS--------------------------------------
T ss_pred c----ccc--cCChhH-----hccCCC--CEEEECCCcCCCC--------------------------------------
Confidence 0 000 000000 000011 1356777643100
Q ss_pred cCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEE
Q 009392 426 TSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAI 505 (535)
Q Consensus 426 ~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~vi 505 (535)
....+.++.|++++|.|.|.+ ....|+||+|||.|.|++...+. ..|.+.|++.|.+++.+.|
T Consensus 202 ---~~~~l~v~~G~~vrlrliN~~--~~~~~~~~i~g~~~~vi~~DG~~------------~~p~~~~~~~l~pg~r~~v 264 (442)
T 2zoo_A 202 ---DENSLTAKVGETVRLYIGNGG--PNLVSSFHVIGEIFDTVYVEGGS------------LKNHNVQTTLIPAGGAAIV 264 (442)
T ss_dssp ---GGGCEEEETTCEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGSS------------CEECSBSEEEECTTEEEEE
T ss_pred ---CCCceEeCCCCEEEEEEEeCC--CCCceeeEEcCCEEEEEecCCcc------------CCCccceEEEECCCeeEEE
Confidence 012468899999999999965 24689999999999999987431 2377899999999999999
Q ss_pred CCCCCCCCCCeeeec
Q 009392 506 RXXXXXXXXAQIIQE 520 (535)
Q Consensus 506 rf~adnPG~w~~HCH 520 (535)
.|++++||.|.+|||
T Consensus 265 ~v~~~~~G~y~~~~~ 279 (442)
T 2zoo_A 265 EFKVEVPGTFILVDH 279 (442)
T ss_dssp EEECCSCEEEEEEES
T ss_pred EEEcCCCCeEEEEec
Confidence 999999999999998
No 55
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.67 E-value=4.4e-15 Score=158.72 Aligned_cols=221 Identities=17% Similarity=0.206 Sum_probs=151.5
Q ss_pred eeEEEECCCCC---------CcEEEEecCCEEEEEEEECCC-CCceEEeCCcccCCCCCCCCCCC----cccCcCCCCCe
Q 009392 42 KPIVTVNRKFP---------GPTLYAREHDTVLVKVVNHVK-YNVTIHWHGVRQLRTGWADGPAY----ITQCPIQSGHS 107 (535)
Q Consensus 42 ~~~~~~NG~~p---------gP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~~~~~~~~~DGvp~----~tq~~i~PG~~ 107 (535)
...++|||+.. -|+|+|++|+++|+||.|... ....+|++|....-.. .||.+- +....|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccce
Confidence 45789999853 189999999999999999985 4678999987654332 688642 34466899999
Q ss_pred EEEEEEeCCCCcceeEecChhhh---h-cccEEEEEEeCCCCCCCCCCCC--------------------------CceE
Q 009392 108 YVYNFTITGQRGTLLWHAHILWL---R-ATVHGAIVILPKRGVPYPFPKP--------------------------HKEV 157 (535)
Q Consensus 108 ~~Y~~~~~~~~Gt~wYH~H~~~~---~-~Gl~G~iiV~~~~~~~~~~~~~--------------------------~~e~ 157 (535)
++..++++..+|+||.+++.... . .|+..+++.........|.... ..+.
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~ 349 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTALNEANLIPLINPGAPGNPVPGGADI 349 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCCCSCBCCGGGCCBSSCCCCSSCSSTTCSSE
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCCcccccchhhcccCCcccCCCcccCCcceE
Confidence 99999985457999999975421 1 3443344443222111111000 0011
Q ss_pred EEEEEeeccCChHHHHHHHHhCCCCCCCCceEEEcCccCCCCCC-------------C--CCCceeEEEeCCCEEEEEEE
Q 009392 158 VVVLAEWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSC-------------S--SQGGFTLPVDSGKTYMLRII 222 (535)
Q Consensus 158 ~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~-------------~--~~~~~~~~v~~G~~~rlRli 222 (535)
.+.+. .+ .......|.|||+.+..-.. . ....+.+.++.|++++++++
T Consensus 350 ~~~l~----------------~~-~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~ 412 (521)
T 1v10_A 350 NLNLR----------------IG-RNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIP 412 (521)
T ss_dssp EEECC----------------EE-CCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEE
T ss_pred EEEEE----------------Ee-cCCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEc
Confidence 11000 00 00011267899987532100 0 01235789999999999999
Q ss_pred EcCCCceEEEEEcCceeEEEEeCCcc----cceeEeceEEe-CCCceEEEEEEeCCCCceeEEEeec
Q 009392 223 NAALNEELFFKIAGHKLTVVEVDATY----VKPFKTDNIVI-APGQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 223 N~~~~~~~~~~i~gh~~~via~DG~~----v~P~~~d~l~l-~pGeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
| . ..+.||||||.|+|++.+|.. ..|...|++.| .+|+++.+.+++++ ||.|.+|||.
T Consensus 413 N--~-~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDN-PG~W~~HCHi 475 (521)
T 1v10_A 413 G--G-GNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN-PGPWFLHCHI 475 (521)
T ss_dssp C--C-BSCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCS-CEEEEEEESC
T ss_pred C--C-CCCCEEEccceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCC-CeeEEEeeCh
Confidence 9 2 345599999999999999875 25889999999 79999999999997 8999999995
No 56
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.66 E-value=6.4e-15 Score=156.85 Aligned_cols=256 Identities=15% Similarity=0.126 Sum_probs=159.7
Q ss_pred EEEEEEEEEeeeccCC-----ceeEEEECCCCC--------CcEEEEecCCEEEEEEEECCC-CCceEEeCCcccCCCCC
Q 009392 25 HYKFNVVMKNSTKLCS-----SKPIVTVNRKFP--------GPTLYAREHDTVLVKVVNHVK-YNVTIHWHGVRQLRTGW 90 (535)
Q Consensus 25 ~~~l~~~~~~~~~~g~-----~~~~~~~NG~~p--------gP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~~~~~~~~ 90 (535)
++.|.+.+-....++. ....++|||+.. .|+|+|++|+++|+||.|... ....+|++|....-..
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~- 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE- 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-
Confidence 4556665544333332 246789999853 289999999999999999984 4678999887654332
Q ss_pred CCCCCC----cccCcCCCCCeEEEEEEeCCCCcceeEecChhh--h-----h-cccEEEEEEeCCCCCCCCCCCCCceEE
Q 009392 91 ADGPAY----ITQCPIQSGHSYVYNFTITGQRGTLLWHAHILW--L-----R-ATVHGAIVILPKRGVPYPFPKPHKEVV 158 (535)
Q Consensus 91 ~DGvp~----~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~--~-----~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~ 158 (535)
.||.+- +....|.|||+++..++++..+|+||.+++... . . .|+..+++.........|......+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~- 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP- 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-
Confidence 788642 334568999999999998545799999987531 1 1 34433444332221110100000000
Q ss_pred EEEEeeccCCh--HHHHH-----H---HHhCCCCCCCCceEEEcCccCCCCCC-------------C--CCCceeEEEeC
Q 009392 159 VVLAEWWKSDT--EAVIN-----Q---ALQSGLAPNVSDSHTINGQPGPISSC-------------S--SQGGFTLPVDS 213 (535)
Q Consensus 159 l~~~d~~~~~~--~~~~~-----~---~~~~g~~~~~~~~~liNG~~~~~~~~-------------~--~~~~~~~~v~~ 213 (535)
..+.+...... ..... . ....... .....|.|||+.+..-.. . ......+.++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 00000000000 00000 0 0000000 011268899997531100 0 01235789999
Q ss_pred CCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCccc----ceeEeceEEe-CCCceEEEEEEeCCCCceeEEEeec
Q 009392 214 GKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYV----KPFKTDNIVI-APGQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 214 G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v----~P~~~d~l~l-~pGeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
|++++++++|......+.||||||.|+|++.+|... .|...|++.| .||+++.+.+++++ ||.|.+|||.
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adn-PG~W~~HCHi 454 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN-PGPWFFHCHI 454 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCS-CEEEEEEESS
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCC-CeeeeEecCc
Confidence 999999999543344566999999999999999762 6889999999 79999999999997 8999999995
No 57
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.63 E-value=6.1e-15 Score=149.25 Aligned_cols=230 Identities=19% Similarity=0.187 Sum_probs=136.2
Q ss_pred ceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCC-ceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceE
Q 009392 187 DSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALN-EELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTT 265 (535)
Q Consensus 187 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~ 265 (535)
..+++||+.. .|+|+++.|+++++|+.|.... ..+.++++++.. .||.. +. . .|.|||++
T Consensus 54 ~~~~~ng~~p---------gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~~--~--~i~pG~~~ 114 (336)
T 1oe1_A 54 QAMTFNGSMP---------GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--KL--T--NVNPGEQA 114 (336)
T ss_dssp EEEEETTBSS---------CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--GG--C--CBCTTEEE
T ss_pred EEEEECCccC---------CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--ce--E--EeCCCCEE
Confidence 6799999841 2899999999999999998642 445678888752 23332 11 1 39999999
Q ss_pred EEEEEeCCCCceeEEEeecCCCC-CcccCCCceEEEEEEcCCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCCC
Q 009392 266 NVLLSADKTSGKYLVAASPFMDA-PIAVDNVTATATLHYSGTLASSATTLTSTPPKNGTAIANKFIDSLRSLNSKKYPAK 344 (535)
Q Consensus 266 dv~v~~~~~~g~y~i~~~~~~~~-~~~~~~~~~~ail~Y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~ 344 (535)
++.+++++ +|.||+|||..... ........+.-|++-.. ....+ .+ .|
T Consensus 115 ~y~f~~~~-~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~-~~~~~--~~-~~-------------------------- 163 (336)
T 1oe1_A 115 TLRFKADR-SGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRD-GLKDP--QG-KP-------------------------- 163 (336)
T ss_dssp EEEEECCS-CEEEEEECCCTTCHHHHHHTTCEEEEEEECTT-CCBCT--TS-CB--------------------------
T ss_pred EEEEECCC-CeEEEEecCCCCchhHHHhCCCeEEEEEecCc-CCccc--cc-Cc--------------------------
Confidence 99999987 89999999963210 00112233333333211 10000 00 00
Q ss_pred CCCccceEEEEEee-cCcC--C------C--CC---------ccCCCCCeeEEEEcCcccccChhhHHHhhhcccCCccc
Q 009392 345 VPQTVDHNLLFTVG-LGVN--P------C--PS---------CKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFT 404 (535)
Q Consensus 345 ~p~~~~~~~~l~~~-~~~~--~------~--~~---------~~~~~g~~~~~~iN~~~~~~p~~~~l~~~~~~~~~~~~ 404 (535)
...|+.+.+.+. .-.. . . +. ..+..+ -.+.|||+.+..
T Consensus 164 --~~~D~e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~liNG~~~~~------------------ 221 (336)
T 1oe1_A 164 --LHYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTP--SHIVFNGKVGAL------------------ 221 (336)
T ss_dssp --CCCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHHHHTTCC--SEEEETTSTTTT------------------
T ss_pred --ccCCceeEeeeeeeeeccccCCceeecccccccccchhhHhhcCCC--CEEEECCeeccC------------------
Confidence 011222221110 0000 0 0 00 000011 124555543210
Q ss_pred cCCCCCCCccccCCCCCCCCccCCCceeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCC
Q 009392 405 TDFPGNPPHTYNFTGTPKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKF 484 (535)
Q Consensus 405 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~ 484 (535)
.+...+.++.|++++|+..+.+ ...+++++|||.|.|++ . |.+
T Consensus 222 -----------------------~~~~~l~v~~GervRlin~~~~---~~~~~~~i~gh~~~Vi~-D-G~~--------- 264 (336)
T 1oe1_A 222 -----------------------TGANALTAKVGETVLLIHSQAN---RDTRPHLIGGHGDWVWE-T-GKF--------- 264 (336)
T ss_dssp -----------------------SGGGCEEEETTCEEEEEEEESS---SCBCEEETTCCEEEEET-T-CCT---------
T ss_pred -----------------------CCCcceEcCCCCEEEEEecCCC---CccceEEECCcCceEeC-C-CcC---------
Confidence 0124578999999998655533 34566667999999996 3 421
Q ss_pred CCCCCC--ccceEEeCCCCEEEECCCCCCCCCCeeeec-------cCceeee
Q 009392 485 NLVDPV--ERNTIGVPSGGWVAIRXXXXXXXXAQIIQE-------YGLCIAI 527 (535)
Q Consensus 485 n~~~p~--~RDTv~vp~~g~~virf~adnPG~w~~HCH-------~gm~~~~ 527 (535)
.+|+ +.||+.|++++.+.|.+++++||.|+|||| .||+..|
T Consensus 265 --~~p~~~~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~ 314 (336)
T 1oe1_A 265 --ANPPQRDLETWFIRGGSAGAALYTFKQPGVYAYLNHNLIEAFELGAAGHI 314 (336)
T ss_dssp --TSCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEE
T ss_pred --cCCccccceEEEECCCCcEEEEEEcCCCceEEEEechhhccccCCCeEEE
Confidence 2343 569999999999999999999999999999 4766544
No 58
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.63 E-value=2.6e-14 Score=150.26 Aligned_cols=237 Identities=13% Similarity=0.148 Sum_probs=160.3
Q ss_pred EEEEEEEEEEeeeccC-------------CceeEEEECCCCCCcEEEEecCCEEEEEEEECC-CCCceEEeCCcccCCCC
Q 009392 24 RHYKFNVVMKNSTKLC-------------SSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHV-KYNVTIHWHGVRQLRTG 89 (535)
Q Consensus 24 ~~~~l~~~~~~~~~~g-------------~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l-~~~t~iH~HG~~~~~~~ 89 (535)
++| |.+.......+| .....+++||+. .|+|+|++|+ |+|+.|.. .....+|++|....-..
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa 256 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVG 256 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEE
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEE
Confidence 455 666665554444 244689999996 5999999999 99999997 46789999997754332
Q ss_pred CCCCCC-----CcccCcCCCCCeEEEEEEeCCCCcceeEecChhhhh---------cccEEEEEEeCCCCCCCC------
Q 009392 90 WADGPA-----YITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLR---------ATVHGAIVILPKRGVPYP------ 149 (535)
Q Consensus 90 ~~DGvp-----~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~---------~Gl~G~iiV~~~~~~~~~------ 149 (535)
.||.. .++...|.|||+++..+++ .+.|+|..-++..... .....-+.+...+ ...|
T Consensus 257 -~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~lP~~l~~~ 333 (481)
T 3zx1_A 257 -TDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN-VELPKNLKIF 333 (481)
T ss_dssp -ETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC-CCCCSCSCCC
T ss_pred -cCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccccCccccCCCCceeEEEEecCCCC-ccCCccccCC
Confidence 68632 1345679999999999998 6788887776542210 0111112222211 1111
Q ss_pred --CCCCCceEEEEEEeeccCC-------hHHHHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEE
Q 009392 150 --FPKPHKEVVVVLAEWWKSD-------TEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLR 220 (535)
Q Consensus 150 --~~~~~~e~~l~~~d~~~~~-------~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlR 220 (535)
.+..+....+.++.....- ....... + ...++|||+.+. ...+.++++.|++++|+
T Consensus 334 ~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~iNG~~~~------~~~~~~~~~~G~~v~w~ 398 (481)
T 3zx1_A 334 KPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIA-L--------ASMFLINRKSYD------LKRIDLSSKLGVVEDWI 398 (481)
T ss_dssp CCCCCCCEEEEEEEEECCSTTTTGGGCCHHHHHHH-H--------HTTEEETTBCCC------TTCCCEEEETTCCEEEE
T ss_pred CCCCCCCcEEEEEEeccchhccccccccccccccc-c--------cceeEECCEeCC------CCCceEEeCCCCEEEEE
Confidence 1122334444443321100 0000000 0 125999999752 13467999999999999
Q ss_pred EEEcCCCceEEEEEcCceeEEEEe--CCccc---ceeEeceEEeCCCceEEEEEEeCCCCceeEEEeec
Q 009392 221 IINAALNEELFFKIAGHKLTVVEV--DATYV---KPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 221 liN~~~~~~~~~~i~gh~~~via~--DG~~v---~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
|+|.+.. .+.||||||.|+|++. +|... ++.+.|++.|.|||++.|.+++++ ||.|.+|||.
T Consensus 399 l~N~~~~-~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~-pG~w~~HCHi 465 (481)
T 3zx1_A 399 VINKSHM-DHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDF-KGLRMYHCHI 465 (481)
T ss_dssp EEECSSS-CEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCCS-CEEEEEEESS
T ss_pred EEcCCCC-ceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcCC-CeeEEEEcCC
Confidence 9997754 5569999999999999 99876 367899999999999999999986 8999999995
No 59
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.60 E-value=7.4e-14 Score=147.74 Aligned_cols=236 Identities=15% Similarity=0.142 Sum_probs=150.2
Q ss_pred ceeEEEECCCC---------CCcEEEEecCCEEEEEEEECCC-CCceEEeCCcccCCCCCCCCCCC----cccCcCCCCC
Q 009392 41 SKPIVTVNRKF---------PGPTLYAREHDTVLVKVVNHVK-YNVTIHWHGVRQLRTGWADGPAY----ITQCPIQSGH 106 (535)
Q Consensus 41 ~~~~~~~NG~~---------pgP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~~~~~~~~~DGvp~----~tq~~i~PG~ 106 (535)
....++|||+- +-|.|+|++|+++|+||.|... ....+|++|....-.. .||.+- +....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCce
Confidence 35689999972 3479999999999999999864 5678899887654332 688642 2345689999
Q ss_pred eEEEEEEeCCCCcceeEecChhh--h-h-cccEEEEEEeCCCCCCCCCCCCCc-eEEEEEEeeccCChHHHHHHHHhCCC
Q 009392 107 SYVYNFTITGQRGTLLWHAHILW--L-R-ATVHGAIVILPKRGVPYPFPKPHK-EVVVVLAEWWKSDTEAVINQALQSGL 181 (535)
Q Consensus 107 ~~~Y~~~~~~~~Gt~wYH~H~~~--~-~-~Gl~G~iiV~~~~~~~~~~~~~~~-e~~l~~~d~~~~~~~~~~~~~~~~g~ 181 (535)
+++..+++++.+|.||..+.... + . .|...+++.........|...... .. ..+.+....... .....+.
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~~L~p~~----~~~~p~~ 320 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHT-KCLIETDLHPLS----RNGVPGN 320 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCS-SBCCGGGCCBSS----CCCCSSC
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCc-cccccccccccc----cccCCCc
Confidence 99999999555699999986421 1 1 333334443332211111100000 00 000000000000 0000000
Q ss_pred ----CC---------CCCceEEEcCccCCCCCC-----------C----CCCceeEEEeCCCEEEEEEE-EcCCCceEEE
Q 009392 182 ----AP---------NVSDSHTINGQPGPISSC-----------S----SQGGFTLPVDSGKTYMLRII-NAALNEELFF 232 (535)
Q Consensus 182 ----~~---------~~~~~~liNG~~~~~~~~-----------~----~~~~~~~~v~~G~~~rlRli-N~~~~~~~~~ 232 (535)
.. .....|.|||+.+..... + ......+.++.|++++|.|. |.+. ..+.|
T Consensus 321 ~~~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~-~~HP~ 399 (495)
T 3t6v_A 321 PHQGGADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAG-GPHPF 399 (495)
T ss_dssp SSTTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSS-CCCEE
T ss_pred cCCCCCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCC-CCcce
Confidence 00 011258899987521100 0 01234689999999999998 4443 45569
Q ss_pred EEcCceeEEEEeCCccc----ceeEeceEEeCC-CceEEEEEEeCCCCceeEEEeec
Q 009392 233 KIAGHKLTVVEVDATYV----KPFKTDNIVIAP-GQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 233 ~i~gh~~~via~DG~~v----~P~~~d~l~l~p-GeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
|+|||.|.|++.+|... .|...|++.|.+ |+.+.+.+++++ ||.|.+|||.
T Consensus 400 HLHGh~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adn-PG~W~~HCHi 455 (495)
T 3t6v_A 400 HLHGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDN-PGPWFLHCHI 455 (495)
T ss_dssp EETTCCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCS-CEEEEEEESC
T ss_pred eecCCcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCC-CeeEEEEecc
Confidence 99999999999988754 588999999997 999999999997 8999999995
No 60
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.59 E-value=2.6e-13 Score=145.27 Aligned_cols=223 Identities=13% Similarity=0.167 Sum_probs=148.6
Q ss_pred eeEEEECCCCCCcEEEEecCCEEEEEEEECCC-CCceEEeCCcccCCCCCCCCCCC----cccCcCCCCCeEEEEEEeCC
Q 009392 42 KPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-YNVTIHWHGVRQLRTGWADGPAY----ITQCPIQSGHSYVYNFTITG 116 (535)
Q Consensus 42 ~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~~~~~~~~~DGvp~----~tq~~i~PG~~~~Y~~~~~~ 116 (535)
...+++||+. .|+|+|++|+++|+||.|... ....+|++|....-.. .||.+- +....|.|||+++..++++.
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE-IDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe-ccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4689999996 699999999999999999974 5678888886654332 688642 33456899999999999843
Q ss_pred C-CcceeEecChhhhh-------cccEE-EEEEeCCCC-CCCC-----------------C------CCCCceEEEEEEe
Q 009392 117 Q-RGTLLWHAHILWLR-------ATVHG-AIVILPKRG-VPYP-----------------F------PKPHKEVVVVLAE 163 (535)
Q Consensus 117 ~-~Gt~wYH~H~~~~~-------~Gl~G-~iiV~~~~~-~~~~-----------------~------~~~~~e~~l~~~d 163 (535)
+ .|.||..+...... ....+ +++...... .+.+ + ...++.+.+.+.-
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~ 324 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVM 324 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEe
Confidence 3 57999988644221 11122 222222111 0000 0 0011111111110
Q ss_pred eccCChHHHHHHHHhCCCCCCCCceEEEcCccCCCCCC--------------C----CCCceeEEEeCCCEEEEEEEEcC
Q 009392 164 WWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSC--------------S----SQGGFTLPVDSGKTYMLRIINAA 225 (535)
Q Consensus 164 ~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~--------------~----~~~~~~~~v~~G~~~rlRliN~~ 225 (535)
. . .......++|||+.+..... + ......+.++.|++++|.|.|.+
T Consensus 325 --~------------~--~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~ 388 (534)
T 1zpu_A 325 --D------------N--LKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQD 388 (534)
T ss_dssp --E------------E--CTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECS
T ss_pred --e------------c--cCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCC
Confidence 0 0 00112467899986521100 0 00134688999999999999998
Q ss_pred CCceEEEEEcCceeEEEEeCCc-----------c---------cceeEeceEEeCCCceEEEEEEeCCCCceeEEEeec
Q 009392 226 LNEELFFKIAGHKLTVVEVDAT-----------Y---------VKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 226 ~~~~~~~~i~gh~~~via~DG~-----------~---------v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
... +.||||||.|+|++.++. + ..|...|++.|.||+.+.|.+++++ ||.|.+|||.
T Consensus 389 ~~~-HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDN-PG~W~~HCHi 465 (534)
T 1zpu_A 389 TGT-HPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADN-PGVWFFHCHI 465 (534)
T ss_dssp SSC-EEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCS-CEEEEEEECC
T ss_pred CCC-CCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCC-CeeEEEEeCc
Confidence 654 559999999999998853 1 2478899999999999999999997 8999999995
No 61
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.57 E-value=2.1e-13 Score=144.23 Aligned_cols=236 Identities=14% Similarity=0.115 Sum_probs=149.1
Q ss_pred ceeEEEECCCC--------CCcEEEEecCCEEEEEEEECCC-CCceEEeCCcccCCCCCCCCCCC----cccCcCCCCCe
Q 009392 41 SKPIVTVNRKF--------PGPTLYAREHDTVLVKVVNHVK-YNVTIHWHGVRQLRTGWADGPAY----ITQCPIQSGHS 107 (535)
Q Consensus 41 ~~~~~~~NG~~--------pgP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~~~~~~~~~DGvp~----~tq~~i~PG~~ 107 (535)
....++|||+- +-|.|+|++|+++++||.|... ....+|++|....-.. .||.+- +....|.|||+
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcE
Confidence 35689999973 3479999999999999999874 5678999997654432 688642 23456899999
Q ss_pred EEEEEEeCCCCcceeEecChhh--h-h-cccEEEEEEeCCCCCCCCCCCCCceEEEEEEeeccCChHHHHHHHHhCCC--
Q 009392 108 YVYNFTITGQRGTLLWHAHILW--L-R-ATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALQSGL-- 181 (535)
Q Consensus 108 ~~Y~~~~~~~~Gt~wYH~H~~~--~-~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~-- 181 (535)
++..+++++.+|.||..+.... + . .+..-+++.........|........ ..+.+....... .....+.
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~----~~~~p~~~~ 318 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLV----STPVPGAPS 318 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSS----CCCCSSCSS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccc----cccCCCccc
Confidence 9999999555699999875321 1 1 23222333332221111110000000 000000000000 0000000
Q ss_pred --CC---------CCCceEEEcCccCCCCC---------C--C----CCCceeEEEeCCCEEEEEEEE---cCCCceEEE
Q 009392 182 --AP---------NVSDSHTINGQPGPISS---------C--S----SQGGFTLPVDSGKTYMLRIIN---AALNEELFF 232 (535)
Q Consensus 182 --~~---------~~~~~~liNG~~~~~~~---------~--~----~~~~~~~~v~~G~~~rlRliN---~~~~~~~~~ 232 (535)
.. .....|.|||+.+.... . + ......+.++.|++++|.|.| .+. ..+.|
T Consensus 319 ~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~-~~HP~ 397 (499)
T 3pxl_A 319 SGGVDKAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPG-APHPF 397 (499)
T ss_dssp TTCSSEEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCS-CSCEE
T ss_pred CCCCcEEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCC-CCccc
Confidence 00 01135789998652100 0 0 012357899999999999994 433 34569
Q ss_pred EEcCceeEEEEeCCccc----ceeEeceEEeCC---CceEEEEEEeCCCCceeEEEeec
Q 009392 233 KIAGHKLTVVEVDATYV----KPFKTDNIVIAP---GQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 233 ~i~gh~~~via~DG~~v----~P~~~d~l~l~p---GeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
|+|||.|+|++.+|... .|...|++.|.+ |+.+.+.+++++ ||.|.+|||.
T Consensus 398 HLHGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adn-PG~W~~HCHi 455 (499)
T 3pxl_A 398 HLHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNN-PGPWFLHCHI 455 (499)
T ss_dssp EETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCS-CEEEEEEESS
T ss_pred eecCCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCC-CceEEEEeCC
Confidence 99999999999988653 589999999987 999999999997 8999999995
No 62
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.57 E-value=1.5e-13 Score=148.06 Aligned_cols=211 Identities=17% Similarity=0.148 Sum_probs=138.4
Q ss_pred EEEEecCCEEEEEEEECCC-CCceEEeCCcccCCCCCCCCCCC----cccCcCCCCCeEEEEEEe-CCCCcceeEecChh
Q 009392 55 TLYAREHDTVLVKVVNHVK-YNVTIHWHGVRQLRTGWADGPAY----ITQCPIQSGHSYVYNFTI-TGQRGTLLWHAHIL 128 (535)
Q Consensus 55 ~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~~~~~~~~~DGvp~----~tq~~i~PG~~~~Y~~~~-~~~~Gt~wYH~H~~ 128 (535)
+|+|++|+++|+||.|... ....+|++|....-.. .||.+- +....|.|||+++..+++ +..+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE-ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE-ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999974 4578899887654332 688542 334668999999999998 44589999998864
Q ss_pred hh---hcccEEEEEEeCCCCCCCCC---C-----------------------------CCCceEEEEEEeeccCChHHHH
Q 009392 129 WL---RATVHGAIVILPKRGVPYPF---P-----------------------------KPHKEVVVVLAEWWKSDTEAVI 173 (535)
Q Consensus 129 ~~---~~Gl~G~iiV~~~~~~~~~~---~-----------------------------~~~~e~~l~~~d~~~~~~~~~~ 173 (535)
.. .....+.|-.........+. + ..++.+.+.+..-.
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~-------- 355 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNV-------- 355 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEE--------
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEeecc--------
Confidence 31 11122333333222100000 0 00111111110000
Q ss_pred HHHHhCCCCCCCCceEEEcCccCCCC----------------C----------CCC-----------CCceeEEEeCCCE
Q 009392 174 NQALQSGLAPNVSDSHTINGQPGPIS----------------S----------CSS-----------QGGFTLPVDSGKT 216 (535)
Q Consensus 174 ~~~~~~g~~~~~~~~~liNG~~~~~~----------------~----------~~~-----------~~~~~~~v~~G~~ 216 (535)
......+.|||+.+..- + |.. .....+.++.|++
T Consensus 356 ---------~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~ 426 (552)
T 1aoz_A 356 ---------INGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEV 426 (552)
T ss_dssp ---------ETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCE
T ss_pred ---------CCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCE
Confidence 00012467787643110 0 000 0013588999999
Q ss_pred EEEEEEEcCCC-----ceEEEEEcCceeEEEEeC-Ccc----------cceeEeceEEeCCCceEEEEEEeCCCCceeEE
Q 009392 217 YMLRIINAALN-----EELFFKIAGHKLTVVEVD-ATY----------VKPFKTDNIVIAPGQTTNVLLSADKTSGKYLV 280 (535)
Q Consensus 217 ~rlRliN~~~~-----~~~~~~i~gh~~~via~D-G~~----------v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i 280 (535)
++|.|.|.+.. ..+.||||||.|+|++.. |.+ ..|...|++.|.+|+.+.|.+++++ ||.|.+
T Consensus 427 v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDN-PG~W~~ 505 (552)
T 1aoz_A 427 VDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADN-PGVWAF 505 (552)
T ss_dssp EEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCS-CEEEEE
T ss_pred EEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCC-CeEEEE
Confidence 99999998753 356799999999999984 553 2578999999999999999999997 899999
Q ss_pred Eeec
Q 009392 281 AASP 284 (535)
Q Consensus 281 ~~~~ 284 (535)
|||.
T Consensus 506 HCHi 509 (552)
T 1aoz_A 506 HCHI 509 (552)
T ss_dssp EESS
T ss_pred Eeee
Confidence 9995
No 63
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.55 E-value=1.6e-15 Score=126.40 Aligned_cols=90 Identities=21% Similarity=0.151 Sum_probs=70.7
Q ss_pred CCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCC--CCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecC
Q 009392 49 RKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRT--GWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAH 126 (535)
Q Consensus 49 G~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~--~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H 126 (535)
-+|++|+|++++||+|+ ++|....++++||||...+.. ..+||.+ .+++.|.||++++|+|.+++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 36778999999999975 679988999999999875431 0133332 355789999999999986468999999999
Q ss_pred hhhhhcccEEEEEEeC
Q 009392 127 ILWLRATVHGAIVILP 142 (535)
Q Consensus 127 ~~~~~~Gl~G~iiV~~ 142 (535)
.|. .+||.|.|+|++
T Consensus 91 ~H~-~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PHR-GAGMVGKITVEG 105 (105)
T ss_dssp TTG-GGTCEEEEEECC
T ss_pred Cch-hcCCEEEEEEcC
Confidence 432 379999999974
No 64
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.55 E-value=2.7e-13 Score=142.56 Aligned_cols=250 Identities=12% Similarity=0.118 Sum_probs=156.6
Q ss_pred EEEEEEEEEEeeeccC--------------CceeEEEECCCCCCcEEEEecCCEEEEEEEECCC-CCceEEe-CCcccCC
Q 009392 24 RHYKFNVVMKNSTKLC--------------SSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-YNVTIHW-HGVRQLR 87 (535)
Q Consensus 24 ~~~~l~~~~~~~~~~g--------------~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-~~t~iH~-HG~~~~~ 87 (535)
.++.|.+++.....+| .....+++||+. .|.+.+ +|+++|+||.|... ....+++ +|....-
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 3666777765544333 334689999996 588876 67899999999974 5677887 6754332
Q ss_pred CCCCCCCCC-----cccCcCCCCCeEEEEEEeCCCCcceeEecChhhhh-------cccEEEEEEeC-----CCCCC---
Q 009392 88 TGWADGPAY-----ITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLR-------ATVHGAIVILP-----KRGVP--- 147 (535)
Q Consensus 88 ~~~~DGvp~-----~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-------~Gl~G~iiV~~-----~~~~~--- 147 (535)
.. .||.+- ++...|.|||+++..+++ .+.++|+.-+...... ..-.-.+-|.+ ....+
T Consensus 229 Ia-~DG~~l~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 229 IA-SDGGLLPEPVKVSELPVLMGERFEVLVEV-NDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp EE-ETTEEEEEEEEESCEEECTTCEEEEEEEE-CTTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred EE-eCCCcccCccEeceEEECCCCEEEEEEEe-CCCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 22 688431 345679999999999999 5678887765432110 11011122221 11100
Q ss_pred C--C-CCC----CCceEEEEEEe-eccCChHHHHHHHH---hCC-----------CCCC----------CCceEEEcCcc
Q 009392 148 Y--P-FPK----PHKEVVVVLAE-WWKSDTEAVINQAL---QSG-----------LAPN----------VSDSHTINGQP 195 (535)
Q Consensus 148 ~--~-~~~----~~~e~~l~~~d-~~~~~~~~~~~~~~---~~g-----------~~~~----------~~~~~liNG~~ 195 (535)
. + .+. ..+++.+.+.. +.......+++.+. ..+ .... ....++|||+.
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~ 386 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQA 386 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBC
T ss_pred ccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCee
Confidence 0 1 111 11333443321 00000000111000 000 0000 01247999997
Q ss_pred CCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccc---eeEeceEEeCCCceEEEEEEeC
Q 009392 196 GPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVK---PFKTDNIVIAPGQTTNVLLSAD 272 (535)
Q Consensus 196 ~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~---P~~~d~l~l~pGeR~dv~v~~~ 272 (535)
+. ...+.++++.|+++||+|+|.+....+.||||+|.|+|++.||.... +.++|++.|. ||+++|+++++
T Consensus 387 ~~------~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~ 459 (488)
T 3od3_A 387 FD------MNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFN 459 (488)
T ss_dssp CC------TTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBC
T ss_pred CC------CCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEec
Confidence 52 13467899999999999999986556779999999999999998774 3579999999 99999999997
Q ss_pred CC---CceeEEEeec
Q 009392 273 KT---SGKYLVAASP 284 (535)
Q Consensus 273 ~~---~g~y~i~~~~ 284 (535)
+. +|.|++|||.
T Consensus 460 ~~~~~~G~~m~HCH~ 474 (488)
T 3od3_A 460 HDAPKEHAYMAHCHL 474 (488)
T ss_dssp SCCCGGGCEEEEESS
T ss_pred cCCCCCCCEEEeCCc
Confidence 53 5799999995
No 65
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.53 E-value=1.1e-12 Score=141.30 Aligned_cols=240 Identities=11% Similarity=0.066 Sum_probs=146.7
Q ss_pred eeEEEECCCCC--------CcEEEEecCCEEEEEEEECCC-CCceEEeCCcccCCCCCCCCCCC----cccCcCCCCCeE
Q 009392 42 KPIVTVNRKFP--------GPTLYAREHDTVLVKVVNHVK-YNVTIHWHGVRQLRTGWADGPAY----ITQCPIQSGHSY 108 (535)
Q Consensus 42 ~~~~~~NG~~p--------gP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~~~~~~~~~DGvp~----~tq~~i~PG~~~ 108 (535)
...++|||+.. -|+|++++|+++|+||.|... ....+|++|....-.. .||.+- +....|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEEE
Confidence 45789999863 369999999999999999985 4678999987654332 688652 344668999999
Q ss_pred EEEEEeCCCCcceeEecCh--hhh---h-cc-cEEEEEEeCCCCCCCCCCC----CC----ceEEE-EEEeeccCChH--
Q 009392 109 VYNFTITGQRGTLLWHAHI--LWL---R-AT-VHGAIVILPKRGVPYPFPK----PH----KEVVV-VLAEWWKSDTE-- 170 (535)
Q Consensus 109 ~Y~~~~~~~~Gt~wYH~H~--~~~---~-~G-l~G~iiV~~~~~~~~~~~~----~~----~e~~l-~~~d~~~~~~~-- 170 (535)
+..++++..+|.||..+.. ... . .. ..+.+....... ..|... .+ .+..+ -+.........
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~-~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~ 352 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPG-GLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFV 352 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCC-SCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCC-CCCCCCCCcCCCcccccccccccCCCCCCCCcccc
Confidence 9999985557999998875 211 1 11 123333332211 111000 00 00000 00000000000
Q ss_pred -HHHHHH-HhCCCCCCCCceEEEcCccCCCCCCCC-------------CCceeEEEeCCCEEEEEEEEcCC----CceEE
Q 009392 171 -AVINQA-LQSGLAPNVSDSHTINGQPGPISSCSS-------------QGGFTLPVDSGKTYMLRIINAAL----NEELF 231 (535)
Q Consensus 171 -~~~~~~-~~~g~~~~~~~~~liNG~~~~~~~~~~-------------~~~~~~~v~~G~~~rlRliN~~~----~~~~~ 231 (535)
.....+ ............+.|||+.+....-.. .....+.++.++.+++-++|... ...+.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP 432 (559)
T 2q9o_A 353 KRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHP 432 (559)
T ss_dssp CCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEE
T ss_pred cceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCc
Confidence 000000 000000011246899999752110000 01134778777777776666643 45677
Q ss_pred EEEcCceeEEEEeCC---------cc------------cceeEeceEEeCCCceEEEEEEeCCCCceeEEEeec
Q 009392 232 FKIAGHKLTVVEVDA---------TY------------VKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 232 ~~i~gh~~~via~DG---------~~------------v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
||||||.|+|++.++ +. ..|...|++.|.+|+++.+.+++++ ||.|++|||.
T Consensus 433 ~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adN-PG~W~~HCHi 505 (559)
T 2q9o_A 433 MHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDN-PGAWLFHCHI 505 (559)
T ss_dssp EEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCS-CEEEEEEECC
T ss_pred EEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCC-CeeEEEEecc
Confidence 999999999999987 32 1477899999999999999999997 8999999995
No 66
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.52 E-value=4.2e-13 Score=140.62 Aligned_cols=212 Identities=15% Similarity=0.098 Sum_probs=142.8
Q ss_pred CCceeEEEECCCCCCcEEEEecCCEEEEEEEECCC-CCceEEe--CC---cccCCCCCCCCCCC-----cccCcCCCCCe
Q 009392 39 CSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-YNVTIHW--HG---VRQLRTGWADGPAY-----ITQCPIQSGHS 107 (535)
Q Consensus 39 g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-~~t~iH~--HG---~~~~~~~~~DGvp~-----~tq~~i~PG~~ 107 (535)
|.....+++||+. .|+|+|++| ++|+|+.|... ....+|+ +| ....-.. .||.+- +....|.|||+
T Consensus 166 ~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via-~DG~~~~~P~~~~~l~l~pgeR 242 (448)
T 3aw5_A 166 GFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIA-VDQGFLARPIEVRALFLAPAER 242 (448)
T ss_dssp CCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEE-ETTEEEEEEEEESCEEECTTCE
T ss_pred CccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEE-eCCCccCCceEeceEEECCcce
Confidence 3445789999996 599999999 99999999984 5688999 77 4432222 688642 23456899999
Q ss_pred EEEEEEeCCCCcceeEecChhhhh--------------cccEEE--EEEeCCCCCCCC-----CC----CCCceEEEEEE
Q 009392 108 YVYNFTITGQRGTLLWHAHILWLR--------------ATVHGA--IVILPKRGVPYP-----FP----KPHKEVVVVLA 162 (535)
Q Consensus 108 ~~Y~~~~~~~~Gt~wYH~H~~~~~--------------~Gl~G~--iiV~~~~~~~~~-----~~----~~~~e~~l~~~ 162 (535)
++..+++ . .|.||..++..... ..-... +.+..+.....| ++ ....+..+.+.
T Consensus 243 ~dvlv~~-~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~ 320 (448)
T 3aw5_A 243 AEVVVEL-G-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALS 320 (448)
T ss_dssp EEEEEEE-C-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEE
T ss_pred EEEEEEC-C-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEe
Confidence 9999998 4 47899988743210 001112 222121110000 00 11122223222
Q ss_pred eeccCChHHHHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEE-EeCCCEEEEEEEEcCCCceEEEEEcCceeEE
Q 009392 163 EWWKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLP-VDSGKTYMLRIINAALNEELFFKIAGHKLTV 241 (535)
Q Consensus 163 d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~-v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v 241 (535)
. + ...|+|||+.+.. ..+.+. ++.|++++|+|.|.+....+.||||||.|+|
T Consensus 321 ~----------------~-----~~~~~iNg~~~~~------~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~V 373 (448)
T 3aw5_A 321 L----------------S-----GMQWTINGMFWNA------SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWI 373 (448)
T ss_dssp E----------------E-----TTEEEETTBCCCT------TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEE
T ss_pred C----------------C-----CceeeECCCcCCC------CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEE
Confidence 1 0 0258999997521 235567 8999999999999983445669999999999
Q ss_pred EEeCCccc------------ce---eEeceEEeCCCceEEEEEEeC---C-CCceeEEEeec
Q 009392 242 VEVDATYV------------KP---FKTDNIVIAPGQTTNVLLSAD---K-TSGKYLVAASP 284 (535)
Q Consensus 242 ia~DG~~v------------~P---~~~d~l~l~pGeR~dv~v~~~---~-~~g~y~i~~~~ 284 (535)
++.+|... .| ...|++.+.||+.+.+.+++. . .| |.+|||.
T Consensus 374 l~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHi 433 (448)
T 3aw5_A 374 IERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHN 433 (448)
T ss_dssp EEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESS
T ss_pred EEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCC
Confidence 99999764 23 589999999999999996554 2 24 9999995
No 67
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.49 E-value=1.6e-12 Score=140.27 Aligned_cols=231 Identities=15% Similarity=0.110 Sum_probs=144.7
Q ss_pred ceeEEEECCCCCCcEEEEecCCEEEEEEEECCC-CCceEEeCCc-------ccCCCCCCCCCCC-----cc------cCc
Q 009392 41 SKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-YNVTIHWHGV-------RQLRTGWADGPAY-----IT------QCP 101 (535)
Q Consensus 41 ~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~-------~~~~~~~~DGvp~-----~t------q~~ 101 (535)
....++|||+. .|.+.|++| ++|+||.|... ....+++.|. ...-.. .||.+- ++ ...
T Consensus 253 ~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa-~DG~~l~~P~~~~~~~~~~~l~ 329 (612)
T 2g23_A 253 FGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG-SDGGLLPRPVPVDFDDTLPVLS 329 (612)
T ss_dssp CCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE-ETTEEEEEEEEECSSSSSSSEE
T ss_pred cCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEE-eCCeEccCCEEecccCcccEEE
Confidence 35678999995 699999999 99999999974 5678888664 111111 688542 22 467
Q ss_pred CCCCCeEEEEEEeCCCCc-ceeEecChhhhhc-----------ccEEEEEEeCCC-CC--CCCCC--C---------CCc
Q 009392 102 IQSGHSYVYNFTITGQRG-TLLWHAHILWLRA-----------TVHGAIVILPKR-GV--PYPFP--K---------PHK 155 (535)
Q Consensus 102 i~PG~~~~Y~~~~~~~~G-t~wYH~H~~~~~~-----------Gl~G~iiV~~~~-~~--~~~~~--~---------~~~ 155 (535)
|.|||+++.-+++...+| +++...-...... +..--|.|..+. .. ..|.. . ...
T Consensus 330 l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~ 409 (612)
T 2g23_A 330 AAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHG 409 (612)
T ss_dssp ECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCE
T ss_pred ECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccc
Confidence 899999999999854467 4666654321111 112224555332 11 11110 0 001
Q ss_pred eEEEEEE------------eeccC---ChHHHHHHHHhCCC----C-CCCCceEEEcCccCCCCCCCCCCceeEEEeCCC
Q 009392 156 EVVVVLA------------EWWKS---DTEAVINQALQSGL----A-PNVSDSHTINGQPGPISSCSSQGGFTLPVDSGK 215 (535)
Q Consensus 156 e~~l~~~------------d~~~~---~~~~~~~~~~~~g~----~-~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~ 215 (535)
...+++. -|... ....+ .+...+. . ......+.|||+.+ .+.+.++++.|+
T Consensus 410 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~iNG~~~-------~~~~~~~v~~G~ 480 (612)
T 2g23_A 410 HRLIVLTPPGTKGSGGHPEIWEMAEVEDPADV--QVPAEGVIQVTGADGRTKTYRRTAATF-------NDGLGFTIGEGT 480 (612)
T ss_dssp EEEEEECCTTCTTSTTCCCEEEEEEEC-------CCSCTTEEEEECTTSCEEEEEEEECST-------TSCCCEEEETTC
T ss_pred eeEEeeccccccccccccceeecccccccccc--ccccccceeeeccCCceeEEEECCccC-------CCCCceEecCCC
Confidence 1122221 01000 00000 0000000 0 00123688999975 234789999999
Q ss_pred EEEEEEEEcCCCceEEEEEcCceeEEEEeCCc------------------------cc---ceeEeceEEeCCCceEEEE
Q 009392 216 TYMLRIINAALNEELFFKIAGHKLTVVEVDAT------------------------YV---KPFKTDNIVIAPGQTTNVL 268 (535)
Q Consensus 216 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~------------------------~v---~P~~~d~l~l~pGeR~dv~ 268 (535)
+++|+|+|.+.. .+.||||+|.|+|++.+|. .. ++.++|++.|.|||++.|.
T Consensus 481 ~v~w~l~N~~~~-~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~ 559 (612)
T 2g23_A 481 HEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVM 559 (612)
T ss_dssp EEEEEEEECSSS-CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEE
T ss_pred EEEEEEEeCCCC-CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEE
Confidence 999999999855 4569999999999987532 11 2347999999999999999
Q ss_pred EEeCCCCceeEEEeec
Q 009392 269 LSADKTSGKYLVAASP 284 (535)
Q Consensus 269 v~~~~~~g~y~i~~~~ 284 (535)
++++..||.|++|||.
T Consensus 560 ~~~~~~pG~w~~HCHi 575 (612)
T 2g23_A 560 GKFDGAYGRFMYHCHL 575 (612)
T ss_dssp EECCSCCEEEEEEESS
T ss_pred EEeCCCCccEEEEeCc
Confidence 9999448999999995
No 68
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.46 E-value=1.2e-12 Score=139.67 Aligned_cols=217 Identities=14% Similarity=0.099 Sum_probs=139.5
Q ss_pred ceeEEEECCCCCCcEEEEecCCEEEEEEEECCC-CCceEEeCCc-ccCCCCCCCCCCC-----cccCcCCCCCeEEEEEE
Q 009392 41 SKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-YNVTIHWHGV-RQLRTGWADGPAY-----ITQCPIQSGHSYVYNFT 113 (535)
Q Consensus 41 ~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~-~~~~~~~~DGvp~-----~tq~~i~PG~~~~Y~~~ 113 (535)
....++|||+. .|.|.++.| ++|+|+.|... ....+|+.|. ...-.. .||.+- +....|.|||+++..++
T Consensus 229 ~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via-~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 229 CGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIG-SDGGLLPRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp CCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred ccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEc-cCCCcccCceEeCeEEECCeeeEEEEEE
Confidence 34689999996 699999885 99999999985 4578999876 433222 688432 34566899999999999
Q ss_pred eCCCCcceeE-ecChh--hhh-c-ccEEEEEEeCCC--C----CCCC--CC--------CCCceEEEEEEeeccCChHHH
Q 009392 114 ITGQRGTLLW-HAHIL--WLR-A-TVHGAIVILPKR--G----VPYP--FP--------KPHKEVVVVLAEWWKSDTEAV 172 (535)
Q Consensus 114 ~~~~~Gt~wY-H~H~~--~~~-~-Gl~G~iiV~~~~--~----~~~~--~~--------~~~~e~~l~~~d~~~~~~~~~ 172 (535)
++..+|.++. .+-.. ... . .....+-..... . ...| +. ....+..+.+.....
T Consensus 306 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~~~------ 379 (513)
T 2wsd_A 306 FTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGTQD------ 379 (513)
T ss_dssp CGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEEEC------
T ss_pred CCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEeecC------
Confidence 8444677332 22111 000 0 011222222111 0 0111 00 001122222221100
Q ss_pred HHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCc-----
Q 009392 173 INQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDAT----- 247 (535)
Q Consensus 173 ~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~----- 247 (535)
. .....++|||+.+. ....+.++.|++++|+|+|.+.. .+.||||||.|+|++.+|.
T Consensus 380 ------~----~g~~~~~iNg~~~~-------~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~~~ 441 (513)
T 2wsd_A 380 ------E----YGRPVLLLNNKRWH-------DPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIARY 441 (513)
T ss_dssp ------T----TSCEEEEETTBCTT-------SCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHHHH
T ss_pred ------C----CCCceEeECCccCC-------CcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCcccccc
Confidence 0 01125789999751 22456899999999999999855 4569999999999998762
Q ss_pred ----------c------cceeEeceEEeCCCceEEEEEEeCCCCceeEEEeec
Q 009392 248 ----------Y------VKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 248 ----------~------v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
+ -+|...|++.|.||+.+.|.++++..||.|.+|||.
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHi 494 (513)
T 2wsd_A 442 QESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHA 494 (513)
T ss_dssp HHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESC
T ss_pred cccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCC
Confidence 1 023589999999999999999995448999999995
No 69
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.45 E-value=9.9e-13 Score=140.51 Aligned_cols=214 Identities=14% Similarity=0.084 Sum_probs=138.9
Q ss_pred eeEEEECCCCCCcEEEEecCCEEEEEEEECCC-CCceEEeCC-------cccCCCCCCCCCC-----CcccCcCCCCCeE
Q 009392 42 KPIVTVNRKFPGPTLYAREHDTVLVKVVNHVK-YNVTIHWHG-------VRQLRTGWADGPA-----YITQCPIQSGHSY 108 (535)
Q Consensus 42 ~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG-------~~~~~~~~~DGvp-----~~tq~~i~PG~~~ 108 (535)
...+++||+. .|.|.++.| ++|+||.|... ....++++| ....-.. .||.+ .++...|.|||++
T Consensus 201 gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa-~DG~~~~~P~~~~~l~l~pgeR~ 277 (534)
T 3abg_A 201 GDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA-SDSGLLEHPADTSLLYISMAERY 277 (534)
T ss_dssp CSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE-ETTEEEEEEEEESCEEECTTCEE
T ss_pred CceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEEEEE-eCCCcccCceEeceEEECCccEE
Confidence 4689999985 699999985 99999999984 456888876 2222111 68752 1345679999999
Q ss_pred EEEEEeCCCCc-ceeEecChhhh--------hcccEEEEEEeCCCCC------CCCCC-------C--CCceEEEEEEee
Q 009392 109 VYNFTITGQRG-TLLWHAHILWL--------RATVHGAIVILPKRGV------PYPFP-------K--PHKEVVVVLAEW 164 (535)
Q Consensus 109 ~Y~~~~~~~~G-t~wYH~H~~~~--------~~Gl~G~iiV~~~~~~------~~~~~-------~--~~~e~~l~~~d~ 164 (535)
+..++++..+| +||..+..... .....+.+-....... ..|.. . ...+..+.+
T Consensus 278 dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~L~~~~~p~~~~~~~~~~~~--- 354 (534)
T 3abg_A 278 EVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRF--- 354 (534)
T ss_dssp EEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCCCCCCSCCCCCCCCCEEEEC---
T ss_pred EEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccccccCCCCCCccccceEEEE---
Confidence 99999844478 68876632100 0011122222211110 00100 0 000111110
Q ss_pred ccCChHHHHHHHHhCCCCCCCCceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEe
Q 009392 165 WKSDTEAVINQALQSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEV 244 (535)
Q Consensus 165 ~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~ 244 (535)
+ .....++|||+.+... .....++++.|++++|.|.|.+....+.||||||.|+|++.
T Consensus 355 ---------------~---~~~~~w~iNG~~f~~~----~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~ 412 (534)
T 3abg_A 355 ---------------G---RTGPTWTINGVAFADV----QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISR 412 (534)
T ss_dssp ---------------S---CCCSTTCCCCBTTBCT----TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEE
T ss_pred ---------------e---ccCceeEECCcccCCC----CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEE
Confidence 0 0113578999875211 11235689999999999999986545669999999999998
Q ss_pred -CCc---ccce---eEeceEEeCCCceEEEEEE-eCCCCceeEEEeec
Q 009392 245 -DAT---YVKP---FKTDNIVIAPGQTTNVLLS-ADKTSGKYLVAASP 284 (535)
Q Consensus 245 -DG~---~v~P---~~~d~l~l~pGeR~dv~v~-~~~~~g~y~i~~~~ 284 (535)
+|. ...+ ...|++.|.||+++.|.+. +++ ||.|.+|||.
T Consensus 413 ~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adn-pG~w~~HCHi 459 (534)
T 3abg_A 413 TSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPF-PGVYMFHCHN 459 (534)
T ss_dssp SSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSC-CEEEEEEESC
T ss_pred cCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCC-CccEEEecCh
Confidence 663 1112 5689999999999999998 776 8999999996
No 70
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.43 E-value=2.3e-13 Score=114.66 Aligned_cols=105 Identities=17% Similarity=0.144 Sum_probs=80.7
Q ss_pred EEEEEEEEEEeee-----ccCCceeE-EEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCc
Q 009392 24 RHYKFNVVMKNST-----KLCSSKPI-VTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYI 97 (535)
Q Consensus 24 ~~~~l~~~~~~~~-----~~g~~~~~-~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~ 97 (535)
+.|++.+...... .+|..... ..+|++|+++.|++++||+|+++++|.... +||+..... |+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~~----~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDAF----GV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGGG----TE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcCC----Cc---
Confidence 4566666664433 34544444 588999998999999999999999999755 566654322 22
Q ss_pred ccCcCCCCCeEEEEEEeCCCCcceeEecChhhhhcccEEEEEEeC
Q 009392 98 TQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVILP 142 (535)
Q Consensus 98 tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~Gl~G~iiV~~ 142 (535)
+..+.||++++|.|.+ +++|+||||||.+....+|.|.|+|.+
T Consensus 70 -~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 -QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp -EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred -eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 3669999999999997 799999999998765556999999974
No 71
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.42 E-value=6.8e-13 Score=117.90 Aligned_cols=99 Identities=21% Similarity=0.140 Sum_probs=73.4
Q ss_pred cCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCC------CCCcc-cCcCCCCC--eE
Q 009392 38 LCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADG------PAYIT-QCPIQSGH--SY 108 (535)
Q Consensus 38 ~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DG------vp~~t-q~~i~PG~--~~ 108 (535)
-+...+...++|. ++|+|+|++||+|+|+++|... ...|.+.+...+.++.+. +++.. ...|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 4555556777887 6799999999999999999733 346666666555443321 11100 02689999 99
Q ss_pred EEEEEeCCCCcceeEecChhhhh-cccEEEEEEe
Q 009392 109 VYNFTITGQRGTLLWHAHILWLR-ATVHGAIVIL 141 (535)
Q Consensus 109 ~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~iiV~ 141 (535)
+|+|++ ++|+||||||..++. +||+|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999985 899999999987777 8999999985
No 72
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.33 E-value=2.1e-10 Score=122.89 Aligned_cols=234 Identities=11% Similarity=0.025 Sum_probs=144.1
Q ss_pred eeEEEECCCCC----------------CcEEEEecCCEEEEEEEECCC-CCceEEeCCcccCCCCCCCCCCC----cccC
Q 009392 42 KPIVTVNRKFP----------------GPTLYAREHDTVLVKVVNHVK-YNVTIHWHGVRQLRTGWADGPAY----ITQC 100 (535)
Q Consensus 42 ~~~~~~NG~~p----------------gP~i~~~~Gd~v~v~v~N~l~-~~t~iH~HG~~~~~~~~~DGvp~----~tq~ 100 (535)
...+++||+-. .++|++++|+++++||.|... ....++++|....-.. .||++- +...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa-~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA-NDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE-eCCccCCceEeeEE
Confidence 45689999742 379999999999999999975 4568999987654432 688652 3345
Q ss_pred cCCCCCeEEEEEEeCCCCcceeEecChhh-----hhcccEEEEEEeCCCCCCCCCCCC--CceEEEEEEeeccCChHHHH
Q 009392 101 PIQSGHSYVYNFTITGQRGTLLWHAHILW-----LRATVHGAIVILPKRGVPYPFPKP--HKEVVVVLAEWWKSDTEAVI 173 (535)
Q Consensus 101 ~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~-----~~~Gl~G~iiV~~~~~~~~~~~~~--~~e~~l~~~d~~~~~~~~~~ 173 (535)
.|.|||+++..+++++.+|.||..+.... ...+..-+|+.........|.... ..+. .+ | .....+
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~--~~-~---~~~~~L- 376 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGT--CE-D---EPVASL- 376 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCC--SC-C---SCGGGC-
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccch--hh-c---cccccc-
Confidence 68999999999999656799999987542 112222233333322111111000 0000 00 0 000000
Q ss_pred HHHHhCCC------------CCCCCceEEEcCccCCC-C---------CCCC---CCceeEEE----eCCCEEEEEEEEc
Q 009392 174 NQALQSGL------------APNVSDSHTINGQPGPI-S---------SCSS---QGGFTLPV----DSGKTYMLRIINA 224 (535)
Q Consensus 174 ~~~~~~g~------------~~~~~~~~liNG~~~~~-~---------~~~~---~~~~~~~v----~~G~~~rlRliN~ 224 (535)
........ .......+.|||..+.. . .... ...-.+.+ +.|+++.|-|-|.
T Consensus 377 ~P~~~~~~~~~~~~~~~l~~~~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~ 456 (580)
T 3sqr_A 377 VPHLALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDL 456 (580)
T ss_dssp CBSSCCBCCSEEEEEEEEEEEESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEEC
T ss_pred ccCCCCCCCCccceEEEEEeccCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCC
Confidence 00000000 00012357788876421 0 0000 00112334 3599999999998
Q ss_pred CC-CceEEEEEcCceeEEEEeCCc------------ccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeec
Q 009392 225 AL-NEELFFKIAGHKLTVVEVDAT------------YVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 225 ~~-~~~~~~~i~gh~~~via~DG~------------~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
+. ...+.||+|||+|.|++.+.+ +..|...|++.+.+|+...+.+++++ ||.|.+|||.
T Consensus 457 ~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adN-PG~W~~HCHi 528 (580)
T 3sqr_A 457 TGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDN-PGSWLLHCHI 528 (580)
T ss_dssp SSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCS-CEEEEEEECS
T ss_pred CccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCC-CeeeEEEECc
Confidence 71 235669999999999998432 23588999999999999999999997 8999999995
No 73
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.27 E-value=6.3e-12 Score=133.62 Aligned_cols=96 Identities=19% Similarity=0.188 Sum_probs=75.5
Q ss_pred cCCceeEEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCC
Q 009392 38 LCSSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQ 117 (535)
Q Consensus 38 ~g~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~ 117 (535)
++....++++|++||+|+|++++||+|+++++|.+...-. +||+.+... |+. ..+.||++++|+|++ ++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~~----gv~----~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGNY----GVA----MEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETTT----TEE----EEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecCC----Ccc----eeeCCCCeEEEEEEC-CC
Confidence 3466789999999999999999999999999998653211 466665432 322 579999999999998 89
Q ss_pred CcceeEecChh-hhh-cccEEEEEEeCCC
Q 009392 118 RGTLLWHAHIL-WLR-ATVHGAIVILPKR 144 (535)
Q Consensus 118 ~Gt~wYH~H~~-~~~-~Gl~G~iiV~~~~ 144 (535)
+|+||||||.. +.. .||+|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 99999999932 222 6999999999763
No 74
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.19 E-value=9.1e-11 Score=97.35 Aligned_cols=79 Identities=22% Similarity=0.294 Sum_probs=63.9
Q ss_pred CCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecCh
Q 009392 48 NRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHI 127 (535)
Q Consensus 48 NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~ 127 (535)
+..|..+.|++++||+|+ +.|..+.++++|+++. +||.....+..|.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~--~~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVT--WINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEE--EEECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 455666899999999965 5699888899998852 3566555556799999999988 489999999988
Q ss_pred hhhhcccEEEEEEe
Q 009392 128 LWLRATVHGAIVIL 141 (535)
Q Consensus 128 ~~~~~Gl~G~iiV~ 141 (535)
|. ||.|.|+|+
T Consensus 95 H~---gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP---FMRGKVVVE 105 (105)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 65 999999985
No 75
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.17 E-value=7e-10 Score=121.24 Aligned_cols=232 Identities=12% Similarity=0.025 Sum_probs=133.5
Q ss_pred CceeEEEECCCCCCcEEEEecCCEEEEEEEECC-CCCceEEeCCc---------ccCCCCCCCCCC-----------Ccc
Q 009392 40 SSKPIVTVNRKFPGPTLYAREHDTVLVKVVNHV-KYNVTIHWHGV---------RQLRTGWADGPA-----------YIT 98 (535)
Q Consensus 40 ~~~~~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l-~~~t~iH~HG~---------~~~~~~~~DGvp-----------~~t 98 (535)
......++||+. .|.+.++. .++|+||.|.. .....+.+-|. .+.. .||.. .++
T Consensus 252 ~~gd~~~vNG~~-~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa---~DG~~l~~Pv~v~~p~~~~ 326 (612)
T 3gyr_A 252 FFGPYTTVNGRI-WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLP 326 (612)
T ss_dssp CCCSEEEETTEE-SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSS
T ss_pred ccCceeeecCCc-cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEE---eCCCccccceeccCccccc
Confidence 345678999986 69999875 58999999997 34555555442 2221 58832 122
Q ss_pred cCcCCCCCeEEEEEEeCCCCcceeEecChhhhh--------c----ccEEEEEEeCCCCC-C--CCCC----------CC
Q 009392 99 QCPIQSGHSYVYNFTITGQRGTLLWHAHILWLR--------A----TVHGAIVILPKRGV-P--YPFP----------KP 153 (535)
Q Consensus 99 q~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~--------~----Gl~G~iiV~~~~~~-~--~~~~----------~~ 153 (535)
...|.||||++.-++++...|.+|+-....... . ...-.+.+.+.... . .+.. ..
T Consensus 327 ~l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 406 (612)
T 3gyr_A 327 VLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDI 406 (612)
T ss_dssp SEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTS
T ss_pred EEEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCccccccccccccccccccc
Confidence 456899999999999855556555432211100 0 11111222222111 0 0000 00
Q ss_pred Cc-eEEEEEEeeccCChHH-----------HHHHHHhCC-------CCCCCCceEEEcCccCCCCCCCCCCceeEEEeCC
Q 009392 154 HK-EVVVVLAEWWKSDTEA-----------VINQALQSG-------LAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSG 214 (535)
Q Consensus 154 ~~-e~~l~~~d~~~~~~~~-----------~~~~~~~~g-------~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G 214 (535)
.. .....+..-....... ......... ........+.+||+.. .....+.++.|
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~-------~~~~~~~~~~g 479 (612)
T 3gyr_A 407 PHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTF-------NDGLGFTIGEG 479 (612)
T ss_dssp CCEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECST-------TSCCCEEEETT
T ss_pred ccccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccC-------CCCcceEeCCC
Confidence 01 1111111100000000 000000000 0011223567777754 22367889999
Q ss_pred CEEEEEEEEcCCCceEEEEEcCceeEEEEeCCccc---------------------------ceeEeceEEeCCCceEEE
Q 009392 215 KTYMLRIINAALNEELFFKIAGHKLTVVEVDATYV---------------------------KPFKTDNIVIAPGQTTNV 267 (535)
Q Consensus 215 ~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v---------------------------~P~~~d~l~l~pGeR~dv 267 (535)
++++|.|+|.+...| .||||||.|+|++.+|... ++-.+|++.|.+|+.+.|
T Consensus 480 ~~~~w~i~N~~~~~H-P~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i 558 (612)
T 3gyr_A 480 THEQWTFLNLSPILH-PMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRV 558 (612)
T ss_dssp CEEEEEEEECSSSCE-EEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEE
T ss_pred CEEEEEEEcCCCCCc-CEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEE
Confidence 999999999987654 5999999999998766421 223589999999999999
Q ss_pred EEEeCCCCceeEEEeec
Q 009392 268 LLSADKTSGKYLVAASP 284 (535)
Q Consensus 268 ~v~~~~~~g~y~i~~~~ 284 (535)
.+++...||.|.+|||.
T Consensus 559 ~~rfadnpG~w~~HCHi 575 (612)
T 3gyr_A 559 MGKFDGAYGRFMYHCHL 575 (612)
T ss_dssp EEECCSCCEEEEEEESS
T ss_pred EEEeCCCCcceEEcCCC
Confidence 99954448999999996
No 76
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.95 E-value=2.3e-09 Score=88.96 Aligned_cols=83 Identities=16% Similarity=0.119 Sum_probs=60.4
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCC----CcccCcCCCCCeEEEEEEeCCCCcceeEecChhh
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPA----YITQCPIQSGHSYVYNFTITGQRGTLLWHAHILW 129 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp----~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~ 129 (535)
+.|++++||+|++ .|....++++|.|+...+. .+|.. ..+...+.||++++|+|.++.++|+||||||.|
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~~H- 93 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEPH- 93 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECTTT-
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeCCh-
Confidence 7999999999655 5887678888888754321 12310 012245899999999997546899999999932
Q ss_pred hhcccEEEEEEeC
Q 009392 130 LRATVHGAIVILP 142 (535)
Q Consensus 130 ~~~Gl~G~iiV~~ 142 (535)
...||.|.|+|.+
T Consensus 94 ~~~GM~G~i~V~~ 106 (106)
T 2gim_A 94 RGAGMVGKITVAG 106 (106)
T ss_dssp GGGTCEEEEEECC
T ss_pred hhcCcEEEEEEcC
Confidence 2279999999964
No 77
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.90 E-value=9.9e-09 Score=89.57 Aligned_cols=91 Identities=15% Similarity=0.095 Sum_probs=65.4
Q ss_pred CCCCcEEEEecCCEEEEEEEECCCC-CceEEeCCccc--------CC--CCC-CCCCC----C--cccCcCCCCCeEEEE
Q 009392 50 KFPGPTLYAREHDTVLVKVVNHVKY-NVTIHWHGVRQ--------LR--TGW-ADGPA----Y--ITQCPIQSGHSYVYN 111 (535)
Q Consensus 50 ~~pgP~i~~~~Gd~v~v~v~N~l~~-~t~iH~HG~~~--------~~--~~~-~DGvp----~--~tq~~i~PG~~~~Y~ 111 (535)
+|--+.|++++||+|+++++|.... +++++.++... .. ..+ .|-+| . .....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4544799999999999999999776 78888887421 00 000 01111 0 011348999999999
Q ss_pred EEeCCCCcceeEecChhhhhcccEEEEEEe
Q 009392 112 FTITGQRGTLLWHAHILWLRATVHGAIVIL 141 (535)
Q Consensus 112 ~~~~~~~Gt~wYH~H~~~~~~Gl~G~iiV~ 141 (535)
|++ +++|+|+||||..+...||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 998 79999999999765545999999984
No 78
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.74 E-value=8.5e-08 Score=83.71 Aligned_cols=92 Identities=18% Similarity=0.174 Sum_probs=64.6
Q ss_pred CCCCcEEEEecCCEEEEEEEE--CCCCCceEEeCCcc------------c----CCCCCCCCCCC-cccCcCCCCCeEEE
Q 009392 50 KFPGPTLYAREHDTVLVKVVN--HVKYNVTIHWHGVR------------Q----LRTGWADGPAY-ITQCPIQSGHSYVY 110 (535)
Q Consensus 50 ~~pgP~i~~~~Gd~v~v~v~N--~l~~~t~iH~HG~~------------~----~~~~~~DGvp~-~tq~~i~PG~~~~Y 110 (535)
+|-.+.|++++||+|+++++| .....++++.+... . ...+..|.... .....|.||++.++
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEE
Confidence 344479999999999999999 66677777776310 0 00000011000 00134899999999
Q ss_pred EEEeCCCCcceeEecChhhhh-cccEEEEEEeC
Q 009392 111 NFTITGQRGTLLWHAHILWLR-ATVHGAIVILP 142 (535)
Q Consensus 111 ~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~iiV~~ 142 (535)
.|.+ +.+|+|||||+..+.. .||.|.|+|.|
T Consensus 109 ~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 109 TFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9998 7899999999986655 79999999974
No 79
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.73 E-value=3.4e-08 Score=80.88 Aligned_cols=79 Identities=13% Similarity=0.104 Sum_probs=62.3
Q ss_pred CCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecCh
Q 009392 48 NRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHI 127 (535)
Q Consensus 48 NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~ 127 (535)
|..|-...|++++||+|++.++|.....+++...+.... ..+.||++.+|.|+. +++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~ 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICRY 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECTT
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECcc
Confidence 455543699999999999999999777766666544321 237899999999997 899999999975
Q ss_pred hhhhcccEEEEEEe
Q 009392 128 LWLRATVHGAIVIL 141 (535)
Q Consensus 128 ~~~~~Gl~G~iiV~ 141 (535)
|.. .||.|.|+|+
T Consensus 88 H~~-~gM~G~i~Ve 100 (100)
T 4hci_A 88 HLL-KGMEGKVIVK 100 (100)
T ss_dssp TGG-GTCEEEEEEC
T ss_pred ccC-CCCEEEEEEC
Confidence 422 6999999996
No 80
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.64 E-value=7.1e-08 Score=83.16 Aligned_cols=79 Identities=14% Similarity=0.192 Sum_probs=57.1
Q ss_pred CCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecCh
Q 009392 48 NRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHI 127 (535)
Q Consensus 48 NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~ 127 (535)
+..|-.+.|++++||+|++ .|....++++++.... +|........+.||++++|+| +++|+|+|+|-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4455447999999999754 5887767777664321 222222334589999999988 478999999976
Q ss_pred hhhhcccEEEEEEe
Q 009392 128 LWLRATVHGAIVIL 141 (535)
Q Consensus 128 ~~~~~Gl~G~iiV~ 141 (535)
|. ||.|.|+|+
T Consensus 122 H~---gM~G~I~V~ 132 (132)
T 3c75_A 122 HP---FMRGKVIVE 132 (132)
T ss_dssp CT---TCEEEEEEC
T ss_pred Cc---CCEEEEEEC
Confidence 54 999999985
No 81
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.61 E-value=1.1e-07 Score=77.55 Aligned_cols=80 Identities=18% Similarity=0.179 Sum_probs=57.6
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCC-CCCcccCcCCCCCeEEEEEEeCCCCcceeEecChhhhhc
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADG-PAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRA 132 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DG-vp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 132 (535)
+.|++++||+|+ +.|....++++|+|+...+.. .|. ....+...+.||++++++|+ ++|+|+|||+.| ...
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~~H-~~~ 89 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCEPH-QGA 89 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGGG-GGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEeC---CCeEEEEEcCCc-ccc
Confidence 799999999865 588877789999998643211 110 00011235899999999873 799999999943 236
Q ss_pred ccEEEEEEe
Q 009392 133 TVHGAIVIL 141 (535)
Q Consensus 133 Gl~G~iiV~ 141 (535)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 2plt_A 90 GMVGKIIVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
No 82
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.52 E-value=2.4e-07 Score=75.44 Aligned_cols=80 Identities=18% Similarity=0.140 Sum_probs=56.0
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecChhhhhcc
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT 133 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 133 (535)
+.|++++||+|++ .|....+++++.++...++.. .++.. .....+.||++++++| +++|+|+|||+.| ...|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-cccC
Confidence 6999999998654 587667888888874321000 00000 1124589999999988 4799999999943 2279
Q ss_pred cEEEEEEe
Q 009392 134 VHGAIVIL 141 (535)
Q Consensus 134 l~G~iiV~ 141 (535)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999985
No 83
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.52 E-value=2.7e-07 Score=73.88 Aligned_cols=73 Identities=21% Similarity=0.222 Sum_probs=54.8
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecChhhhhcc
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT 133 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 133 (535)
+.|++++||+|++ .|....+++++.++.. ++. .....+.||+++++.| +++|+|||||+.+. ..|
T Consensus 19 ~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~~-----~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H~-~~g 83 (91)
T 1bxv_A 19 STIEIQAGDTVQW--VNNKLAPHNVVVEGQP----ELS-----HKDLAFSPGETFEATF---SEPGTYTYYCEPHR-GAG 83 (91)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEETTCG----GGC-----EEEEECSTTCEEEEEC---CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCC----ccC-----cccceeCCCCEEEEEe---CCCEEEEEEeCCCc-cCC
Confidence 6999999999764 5876678888888721 000 1224589999998887 57999999999442 269
Q ss_pred cEEEEEEe
Q 009392 134 VHGAIVIL 141 (535)
Q Consensus 134 l~G~iiV~ 141 (535)
|.|.|+|+
T Consensus 84 M~g~i~V~ 91 (91)
T 1bxv_A 84 MVGKIVVQ 91 (91)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 84
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.48 E-value=4.7e-07 Score=76.71 Aligned_cols=75 Identities=12% Similarity=0.133 Sum_probs=52.0
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecChhhhhcc
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT 133 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 133 (535)
..|++++||+|++.+.|. + |++......+-+|. ....+.||++++|+| +.+|+|||+|-.|. ..|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~-----H~v~~~~~~~P~g~---~~f~~~pg~t~s~TF---~~pG~y~y~C~~H~-~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---S-----HNVEAIKEILPEGV---ESFKSKINESYTLTV---TEPGLYGVKCTPHF-GMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---T-----CCCEECTTSSCTTC---CCCBCCTTCCEEEEE---CSCEEEEEECGGGT-TTT
T ss_pred CEEEECCCCEEEEEECCC---C-----ceEEEcCCcCCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCCC-cCC
Confidence 699999999977766662 3 44433211112332 123467999999998 47999999998432 279
Q ss_pred cEEEEEEeCC
Q 009392 134 VHGAIVILPK 143 (535)
Q Consensus 134 l~G~iiV~~~ 143 (535)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999973
No 85
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.47 E-value=3.5e-07 Score=77.93 Aligned_cols=76 Identities=16% Similarity=0.206 Sum_probs=52.2
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecChhhhhcc
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT 133 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 133 (535)
+.|++++||+|++.+.|. + |++......+-||. ....+.||++++|+| +.+|+|||||-.|. ..|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~-----H~v~~~~~~~P~g~---~~f~s~pGet~s~TF---~~pG~y~y~C~~H~-~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---G-----HNSALMKGGAPEGA---ETWKGKINEEITVTL---SKPGVYMYQCAPHV-GMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---S-----CCCEECTTCSCTTC---CCCBCCTTCCCEEEC---CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEEEECCC---C-----ceEEEccCcCCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCCC-cCC
Confidence 799999999976655543 3 55443211112232 113457999998888 47999999998542 379
Q ss_pred cEEEEEEeCCC
Q 009392 134 VHGAIVILPKR 144 (535)
Q Consensus 134 l~G~iiV~~~~ 144 (535)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999764
No 86
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.44 E-value=6.1e-07 Score=73.58 Aligned_cols=77 Identities=13% Similarity=0.104 Sum_probs=54.0
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCC-------CCCCc--ccCcCCCCCeEEEEEEeCCCCcceeEe
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWAD-------GPAYI--TQCPIQSGHSYVYNFTITGQRGTLLWH 124 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~D-------Gvp~~--tq~~i~PG~~~~Y~~~~~~~~Gt~wYH 124 (535)
+.|++++||+|+ +.|....+++++.+.- .. .+ ..+++ +...+.||++++++| .++|+|+||
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~ 86 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDIP----AG-APGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFY 86 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCC----TT-CCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEE
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCc----cc-ccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEE
Confidence 799999999976 5688666777777621 10 10 01111 223589999999987 589999999
Q ss_pred cChhhhhcccEEEEEEe
Q 009392 125 AHILWLRATVHGAIVIL 141 (535)
Q Consensus 125 ~H~~~~~~Gl~G~iiV~ 141 (535)
|+.| ...||.|.|+|+
T Consensus 87 C~~H-~~~gM~G~i~V~ 102 (102)
T 1kdj_A 87 CTPH-KSANMKGTLTVK 102 (102)
T ss_dssp CSTT-GGGTCEEEEEEC
T ss_pred eCCC-cccCCeEEEEEC
Confidence 9932 237999999985
No 87
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.42 E-value=1.3e-07 Score=78.12 Aligned_cols=78 Identities=10% Similarity=0.072 Sum_probs=57.4
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCC-C
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXX-X 510 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~a-d 510 (535)
.+.++.|++|+|+ |.. ...|++|+||..|... + |. + ......|+..+++++...++|.+ +
T Consensus 20 ~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~--~-g~----------~-~~~~~~~~~~i~pG~~~~~~f~~~~ 80 (105)
T 3cvb_A 20 NVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA--S-KE----------L-ADKLSHSQLMFSPGESYEITFSSDF 80 (105)
T ss_dssp EEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG--C-HH----------H-HHHHCEEEEECSTTCEEEEEECTTS
T ss_pred EEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc--c-cc----------c-cccccccccccCCCCeEEEEEecCC
Confidence 5789999999874 643 5689999999876541 0 10 0 00112578899999999999998 7
Q ss_pred CCCCCeeeec----cCceeeee
Q 009392 511 XXXXAQIIQE----YGLCIAIW 528 (535)
Q Consensus 511 nPG~w~~HCH----~gm~~~~~ 528 (535)
.||.|.|||| .||+..|-
T Consensus 81 ~~G~y~y~C~~H~~~GM~G~i~ 102 (105)
T 3cvb_A 81 PAGTYTYYCAPHRGAGMVGKIT 102 (105)
T ss_dssp CSEEEEEECTTTGGGTCEEEEE
T ss_pred CCeeEEEEeCCchhcCCEEEEE
Confidence 9999999998 37776654
No 88
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.41 E-value=7.5e-07 Score=72.28 Aligned_cols=77 Identities=21% Similarity=0.188 Sum_probs=54.4
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCC--cccCcCCCCCeEEEEEEeCCCCcceeEecChhhhh
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAY--ITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLR 131 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~--~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~ 131 (535)
+.|++++||+| ++.|....+++++.++...+ +|..+ .....+.||+++++.| .++|+|+|||+.|. .
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~-~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPHR-G 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSSTT-T
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccChh-h
Confidence 69999999985 55687666777777654321 11111 1123589999999987 58999999999332 2
Q ss_pred cccEEEEEEe
Q 009392 132 ATVHGAIVIL 141 (535)
Q Consensus 132 ~Gl~G~iiV~ 141 (535)
.||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 6999999984
No 89
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.38 E-value=1.3e-06 Score=73.89 Aligned_cols=75 Identities=12% Similarity=0.056 Sum_probs=51.9
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecChhhhhcc
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT 133 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 133 (535)
..|++++||+|+ ++|.. .++++..+... +-+|. ....+.||++++|+| +.+|+|+|||-.|. ..|
T Consensus 22 ~~i~V~~GDTV~--f~n~~-~~Hnv~~~~~~-----~p~g~---~~~~~~pg~t~s~TF---~~~G~y~Y~C~~H~-~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVK--FVPTD-KSHNAESVREV-----WPEGV---APVKGGFSKEVVFNA---EKEGLYVLKCAPHY-GMG 86 (124)
T ss_dssp SEEEECTTCEEE--EECSS-SSCCCEECTTT-----SCTTS---CCCBCCTTCCEEEEC---CSSEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEE--EEECC-CCccEEEeCCc-----CCCCc---cccccCCCCEEEEEe---CCCeEEEEEcCCCC-cCC
Confidence 699999999965 55553 45555554211 11232 123468999999988 47899999996432 279
Q ss_pred cEEEEEEeCC
Q 009392 134 VHGAIVILPK 143 (535)
Q Consensus 134 l~G~iiV~~~ 143 (535)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999875
No 90
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.37 E-value=1.5e-07 Score=82.03 Aligned_cols=86 Identities=10% Similarity=0.032 Sum_probs=62.0
Q ss_pred eEEeeCCCEEEEEEecCCCCCCC-CCCeeecCCCeEEEe------ecCC---CCCCCCCCCCCCCCCCCccceEEeCCCC
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPE-NHPVHLHGFNFFAVG------KGLG---NFNPKKDPKKFNLVDPVERNTIGVPSGG 501 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~-~HP~HlHG~~F~Vl~------~g~g---~~~~~~~~~~~n~~~p~~RDTv~vp~~g 501 (535)
.+.++.|++|+|+|.|.+ .+ .|.||+|+....+.. ...| .|.+.. ....++||..|.++.
T Consensus 36 ~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~-------~~~~~~~t~~l~pGe 105 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD-------KSNIIAESPLANGNE 105 (139)
T ss_dssp EEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC-------CTTEEEECCCBCTTC
T ss_pred eEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccchhhhhhhhcccccccccCcc-------cccccccccccCCCC
Confidence 478999999999999965 45 799999987542211 0011 111111 124578999999999
Q ss_pred EEEECCCCCCCCCCeeeecc-----Cceeee
Q 009392 502 WVAIRXXXXXXXXAQIIQEY-----GLCIAI 527 (535)
Q Consensus 502 ~~virf~adnPG~w~~HCH~-----gm~~~~ 527 (535)
...|.|++++||.|.||||+ ||+..|
T Consensus 106 t~~v~f~~~~pG~y~f~C~~~~H~~GM~G~i 136 (139)
T 2aan_A 106 TVEVTFTAPAAGTYLYICTVPGHYPLMQGKL 136 (139)
T ss_dssp EEEEEEECCSSEEEEEECCSTTTTTTSEEEE
T ss_pred EEEEEEECCCCeEEEEEcCCCChHHcCEEEE
Confidence 99999999999999999992 566544
No 91
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.36 E-value=1.6e-06 Score=70.54 Aligned_cols=77 Identities=9% Similarity=0.130 Sum_probs=54.7
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCC----C--cccCcCCCCCeEEEEEEeCCCCcceeEecCh
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPA----Y--ITQCPIQSGHSYVYNFTITGQRGTLLWHAHI 127 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp----~--~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~ 127 (535)
+.|++++||+|+ +.|....+++++.++... .+|.. + .....+.||++++++| .++|+|+|+|+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf---~~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEE---CCCceEEEEcCC
Confidence 699999999864 588876677777775322 12211 0 1123479999999887 379999999993
Q ss_pred hhhhcccEEEEEEe
Q 009392 128 LWLRATVHGAIVIL 141 (535)
Q Consensus 128 ~~~~~Gl~G~iiV~ 141 (535)
|. .+||.|.|+|+
T Consensus 87 H~-~~gM~G~i~V~ 99 (99)
T 1plc_A 87 HQ-GAGMVGKVTVN 99 (99)
T ss_dssp GT-TTTCEEEEEEC
T ss_pred Cc-ccCCEEEEEEC
Confidence 32 27999999984
No 92
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.35 E-value=1.8e-06 Score=70.33 Aligned_cols=77 Identities=13% Similarity=0.151 Sum_probs=55.6
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCC------cccCcCCCCCeEEEEEEeCCCCcceeEecCh
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAY------ITQCPIQSGHSYVYNFTITGQRGTLLWHAHI 127 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~------~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~ 127 (535)
+.|++++||+| ++.|....+++++.++... .+|... .....+.||++++++|+ ++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcCC
Confidence 68999999985 5588877788888876432 122210 11235799999998873 79999999993
Q ss_pred hhhhcccEEEEEEe
Q 009392 128 LWLRATVHGAIVIL 141 (535)
Q Consensus 128 ~~~~~Gl~G~iiV~ 141 (535)
| ...||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 H-AGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred c-cccCCEEEEEEC
Confidence 3 226999999984
No 93
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.23 E-value=4.6e-06 Score=70.66 Aligned_cols=75 Identities=19% Similarity=0.207 Sum_probs=49.6
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecChhhhhcc
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT 133 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 133 (535)
+.|++++||+|+ +.|... + |.+........||... ....||++++|.| +.+|+|+|+|..|.+ .|
T Consensus 21 ~~i~V~~GdtV~--f~~~~~-~-----H~v~~~~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~~-~g 85 (123)
T 1paz_A 21 AYIKANPGDTVT--FIPVDK-G-----HNVESIKDMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPHYA-MG 85 (123)
T ss_dssp SEEEECTTCEEE--EEESSS-S-----CCCEECTTCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTTGG-GT
T ss_pred CEEEECCCCEEE--EEECCC-C-----eEEEEecccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCccc-CC
Confidence 799999999965 455532 3 4443321111123211 2356999988887 479999999974322 79
Q ss_pred cEEEEEEeCC
Q 009392 134 VHGAIVILPK 143 (535)
Q Consensus 134 l~G~iiV~~~ 143 (535)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999874
No 94
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.20 E-value=3.7e-06 Score=71.79 Aligned_cols=93 Identities=6% Similarity=-0.012 Sum_probs=60.3
Q ss_pred CCCCcEEEEecC-CEEEEEEEECCCCC-----c--eEEeCCcccC-------CCCCCCCCC----C-c-ccCcCCCCCeE
Q 009392 50 KFPGPTLYAREH-DTVLVKVVNHVKYN-----V--TIHWHGVRQL-------RTGWADGPA----Y-I-TQCPIQSGHSY 108 (535)
Q Consensus 50 ~~pgP~i~~~~G-d~v~v~v~N~l~~~-----t--~iH~HG~~~~-------~~~~~DGvp----~-~-tq~~i~PG~~~ 108 (535)
+|--..|.|++| |+|+|+|+|....+ + .|--+|.... ....++=+| . + ...-|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 343359999999 99999999986432 2 3333331100 000011011 1 0 11247999999
Q ss_pred EEEEEeC--CCCcceeEecChhhhhcccEEEEEEeC
Q 009392 109 VYNFTIT--GQRGTLLWHAHILWLRATVHGAIVILP 142 (535)
Q Consensus 109 ~Y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~iiV~~ 142 (535)
++.|+++ .++|+|||.|-..+.+.||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 9999972 289999999987666669999999963
No 95
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.20 E-value=8.2e-06 Score=67.29 Aligned_cols=78 Identities=14% Similarity=0.197 Sum_probs=53.3
Q ss_pred CCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecChh
Q 009392 49 RKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHIL 128 (535)
Q Consensus 49 G~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~ 128 (535)
..|--..|++++||+|+ +.|.....+++....... |........+.||+++++.| +++|+|+|+|-.|
T Consensus 29 ~~F~P~~i~V~~G~tV~--~~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H 96 (106)
T 1id2_A 29 MKYLTPEVTIKAGETVY--WVNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPH 96 (106)
T ss_dssp TEESSSEEEECTTCEEE--EEECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSC
T ss_pred cEEeCCEEEECCCCEEE--EEECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCCC
Confidence 34433699999999975 458866555555443211 11111112478999999888 4789999999875
Q ss_pred hhhcccEEEEEEe
Q 009392 129 WLRATVHGAIVIL 141 (535)
Q Consensus 129 ~~~~Gl~G~iiV~ 141 (535)
. ||.|.|+|+
T Consensus 97 ~---~M~G~I~V~ 106 (106)
T 1id2_A 97 P---FMRGKVIVE 106 (106)
T ss_dssp T---TCEEEEEEC
T ss_pred C---CCEEEEEEC
Confidence 4 999999984
No 96
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.17 E-value=5e-06 Score=70.42 Aligned_cols=76 Identities=18% Similarity=0.299 Sum_probs=50.5
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecChhhhhcc
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT 133 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 133 (535)
+.|++++||+|+ +.|... + |.+........||... ..+.||++++|.| +.+|+|+|+|..|.+ .|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~-----H~v~~~~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~~-~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-G-----HNVETIKGMAPDGADY---VKTTVGQEAVVKF---DKEGVYGFKCAPHYM-MG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-S-----CCCEECTTSSCTTCCC---CBCCTTSCEEEEC---CSCEEEEEECSTTTT-TT
T ss_pred CEEEECCCCEEE--EEECCC-C-----cEEEEecccCCCCccc---eecCCCCEEEEEe---CCCeEEEEEeCCccc-cC
Confidence 799999999955 555532 3 4443321111233211 2357999988888 479999999974322 79
Q ss_pred cEEEEEEeCCC
Q 009392 134 VHGAIVILPKR 144 (535)
Q Consensus 134 l~G~iiV~~~~ 144 (535)
|.|.|+|.++.
T Consensus 86 M~G~I~V~~~~ 96 (123)
T 1pmy_A 86 MVALVVVGDKR 96 (123)
T ss_dssp CEEEEEESSCC
T ss_pred CEEEEEEcCCC
Confidence 99999998753
No 97
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.16 E-value=8.7e-06 Score=66.06 Aligned_cols=77 Identities=12% Similarity=0.062 Sum_probs=53.7
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCC----cccCcCCCCCeEEEEEEeCCCCcceeEecChhh
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAY----ITQCPIQSGHSYVYNFTITGQRGTLLWHAHILW 129 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~----~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~ 129 (535)
+.|++++||+|+ +.|....++++....-.. -+|.-. .+...+.||+++++.| +++|+|+|+|-.|.
T Consensus 18 ~~i~v~~GdtV~--~~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~ 87 (98)
T 1iuz_A 18 SKISVAAGEAIE--FVNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPHA 87 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTTG
T ss_pred CEEEECCCCEEE--EEECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhhc
Confidence 699999999955 568866677776654211 122210 0112489999999887 48999999998643
Q ss_pred hhcccEEEEEEe
Q 009392 130 LRATVHGAIVIL 141 (535)
Q Consensus 130 ~~~Gl~G~iiV~ 141 (535)
+ +||.|.|+|+
T Consensus 88 ~-~gM~G~I~V~ 98 (98)
T 1iuz_A 88 G-AGMKMTITVQ 98 (98)
T ss_dssp G-GTCEEEEEEC
T ss_pred c-CCCEEEEEEC
Confidence 2 6999999985
No 98
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.14 E-value=1.1e-05 Score=71.66 Aligned_cols=92 Identities=9% Similarity=0.033 Sum_probs=60.5
Q ss_pred CCCCcEEEE-ecCCEEEEEEEECCCCC-----ce--EEeCCcccC------CCCCCCCCC----C-c-ccCcCCCCCeEE
Q 009392 50 KFPGPTLYA-REHDTVLVKVVNHVKYN-----VT--IHWHGVRQL------RTGWADGPA----Y-I-TQCPIQSGHSYV 109 (535)
Q Consensus 50 ~~pgP~i~~-~~Gd~v~v~v~N~l~~~-----t~--iH~HG~~~~------~~~~~DGvp----~-~-tq~~i~PG~~~~ 109 (535)
+|--..|.| ++||+|+|+|+|....+ ++ |--+|.... ....++=++ . + ...-|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 554359999 99999999999997543 22 222331100 000001011 0 0 112479999999
Q ss_pred EEEEeCC--CCcceeEecChhhhhcccEEEEEEeC
Q 009392 110 YNFTITG--QRGTLLWHAHILWLRATVHGAIVILP 142 (535)
Q Consensus 110 Y~~~~~~--~~Gt~wYH~H~~~~~~Gl~G~iiV~~ 142 (535)
+.|++ . ++|+|||+|-..+.+.||.|-|+|.+
T Consensus 134 vtf~~-~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDP-AKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp EEECG-GGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred EEEec-CCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 99987 4 79999999987666669999999963
No 99
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.02 E-value=5.2e-05 Score=64.61 Aligned_cols=92 Identities=13% Similarity=0.117 Sum_probs=59.1
Q ss_pred CCCCcEEEE-ecCCEEEEEEEECCCCC-----ceEE--eCCcccC-------CCCCCC----CCCC-c-ccCcCCCCCeE
Q 009392 50 KFPGPTLYA-REHDTVLVKVVNHVKYN-----VTIH--WHGVRQL-------RTGWAD----GPAY-I-TQCPIQSGHSY 108 (535)
Q Consensus 50 ~~pgP~i~~-~~Gd~v~v~v~N~l~~~-----t~iH--~HG~~~~-------~~~~~D----Gvp~-~-tq~~i~PG~~~ 108 (535)
+|--..|.| ++||+|+|+|+|....+ +++- -+|.... ....+| +-+. + ....|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 453359999 99999999999997543 3322 2221100 000011 0010 1 11247999999
Q ss_pred EEEEEeCC--CCcc-eeEecChhhhhcccEEEEEEeC
Q 009392 109 VYNFTITG--QRGT-LLWHAHILWLRATVHGAIVILP 142 (535)
Q Consensus 109 ~Y~~~~~~--~~Gt-~wYH~H~~~~~~Gl~G~iiV~~ 142 (535)
++.|++ . .+|+ |||.|-..+.+.||.|.|+|.+
T Consensus 94 svtf~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDV-SKIAAGENYAYFCSFPGHWAMMKGTLKLGS 129 (129)
T ss_dssp EEEEEG-GGSCTTCCEEEECCSTTGGGTSEEEEEECC
T ss_pred EEEEec-cccCCCceEEEEeCCCChhHcCEEEEEEeC
Confidence 999997 4 5665 9999987766679999999963
No 100
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.00 E-value=1.9e-05 Score=82.41 Aligned_cols=96 Identities=14% Similarity=0.192 Sum_probs=66.4
Q ss_pred ccCCcee--EEEECCCCCCcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEe
Q 009392 37 KLCSSKP--IVTVNRKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTI 114 (535)
Q Consensus 37 ~~g~~~~--~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~ 114 (535)
++|.... +...+-.|-.+.|+|++||+|++.++|.....-.+ ||+.++.. |+ ..-+.||++.++.|.+
T Consensus 539 RdGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi--HSF~IPsl----GI----K~DaiPGrtnsvtFta 608 (638)
T 3sbq_A 539 RDGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS--HGFVVVNH----GV----SMEISPQQTSSITFVA 608 (638)
T ss_dssp EETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC--EEEEETTT----TE----EEEECTTCEEEEEEEC
T ss_pred cCCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCce--eeeEecCC----Cc----eeeeCCCCeEEEEEEc
Confidence 3554433 34455667657999999999999999974211112 33333221 11 1247899999999998
Q ss_pred CCCCcceeEecChhh-hh-cccEEEEEEeCC
Q 009392 115 TGQRGTLLWHAHILW-LR-ATVHGAIVILPK 143 (535)
Q Consensus 115 ~~~~Gt~wYH~H~~~-~~-~Gl~G~iiV~~~ 143 (535)
+++|+|||+|..-. .. .+|.|.|+|+|+
T Consensus 609 -dkPGvY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 609 -DKPGLHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp -CSCEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred -CCCEEEEEECCCcCCCCcccceEEEEEecC
Confidence 89999999998532 22 789999999874
No 101
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.98 E-value=4.3e-05 Score=64.98 Aligned_cols=92 Identities=10% Similarity=0.134 Sum_probs=60.0
Q ss_pred CCCCcEEEE-ecCCEEEEEEEECCCCC-----ceEEe--CC---------ccc----CCCCCCCCCCCcccCcCCCCCeE
Q 009392 50 KFPGPTLYA-REHDTVLVKVVNHVKYN-----VTIHW--HG---------VRQ----LRTGWADGPAYITQCPIQSGHSY 108 (535)
Q Consensus 50 ~~pgP~i~~-~~Gd~v~v~v~N~l~~~-----t~iH~--HG---------~~~----~~~~~~DGvp~~tq~~i~PG~~~ 108 (535)
+|--..|.| ++|++|+|+|+|....+ +++-+ .+ +.. .-.+..|.--......|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 454358999 99999999999997543 44332 11 100 00000111000011247999999
Q ss_pred EEEEEeCC--CCcc-eeEecChhhhhcccEEEEEEeC
Q 009392 109 VYNFTITG--QRGT-LLWHAHILWLRATVHGAIVILP 142 (535)
Q Consensus 109 ~Y~~~~~~--~~Gt-~wYH~H~~~~~~Gl~G~iiV~~ 142 (535)
++.|++ . ++|+ |+|.|-..+.+.||.|.|+|.+
T Consensus 93 ~vtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDV-SKLKEGEDYAFFCSFPGHWSIMKGTIELGS 128 (128)
T ss_dssp EEEEES-SCCCTTCCEEEECCSTTCTTTSEEEEEECC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEeC
Confidence 999997 5 7885 9999987776679999999963
No 102
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.94 E-value=3.4e-05 Score=65.21 Aligned_cols=73 Identities=18% Similarity=0.190 Sum_probs=49.7
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecChhhhhcc
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHILWLRAT 133 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 133 (535)
+.|++++||+|+ +.|... . |++......+.+|.. ...+.||++++|.| +++|+|+|+|-.|..
T Consensus 21 ~~i~V~~GdtV~--f~n~d~-~-----H~v~~~~~~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVT--FIPTDK-G-----HNVETIKGMIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEE--EEESSS-S-----CCCEECTTCSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEE--EEECCC-C-----cEEEEcccccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 799999999855 556643 4 444432111122221 13457999999988 478999999987543
Q ss_pred cEEEEEEeCC
Q 009392 134 VHGAIVILPK 143 (535)
Q Consensus 134 l~G~iiV~~~ 143 (535)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999874
No 103
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.93 E-value=5.7e-05 Score=64.25 Aligned_cols=91 Identities=11% Similarity=0.045 Sum_probs=59.1
Q ss_pred CCCCcEEEE-ecCCEEEEEEEECCCCC-----ceEEe--CCccc-------CCCCCCCCCC----C-c-ccCcCCCCCeE
Q 009392 50 KFPGPTLYA-REHDTVLVKVVNHVKYN-----VTIHW--HGVRQ-------LRTGWADGPA----Y-I-TQCPIQSGHSY 108 (535)
Q Consensus 50 ~~pgP~i~~-~~Gd~v~v~v~N~l~~~-----t~iH~--HG~~~-------~~~~~~DGvp----~-~-tq~~i~PG~~~ 108 (535)
+|--..|.| ++||+|+|+|+|....+ +++-. .|... .....+|=++ . + ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 454358999 99999999999996543 33332 22110 0000011011 0 1 01248999999
Q ss_pred EEEEEeCC--CCcc-eeEecChhhhhcccEEEEEEe
Q 009392 109 VYNFTITG--QRGT-LLWHAHILWLRATVHGAIVIL 141 (535)
Q Consensus 109 ~Y~~~~~~--~~Gt-~wYH~H~~~~~~Gl~G~iiV~ 141 (535)
++.|+. . .+|+ |||.|-..+.+.||.|-|+|.
T Consensus 94 svtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EEEEEG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 999997 4 6776 999998766666999999984
No 104
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=97.83 E-value=1e-05 Score=66.66 Aligned_cols=77 Identities=12% Similarity=0.095 Sum_probs=53.4
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCC-C
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXX-X 510 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~a-d 510 (535)
.+.++.|++|+|+ |.+ ...|.||+|+..+.. . .|. + . ....+|++.+.++....+.|.+ +
T Consensus 21 ~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~-~--~g~-~----~------~~~~~~~~~~~pG~~~~~~f~~~~ 81 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA-K--SAD-L----A------KSLSHKQLLMSPGQSTSTTFPADA 81 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT-C--CHH-H----H------HHHCBCSCCCSTTCEEEEECCTTC
T ss_pred EEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc-c--ccc-c----c------hhccccceeeCCCCEEEEEEecCC
Confidence 4689999999886 543 468999999864421 0 010 0 0 0011467788899999999998 8
Q ss_pred CCCCCeeeec----cCceeee
Q 009392 511 XXXXAQIIQE----YGLCIAI 527 (535)
Q Consensus 511 nPG~w~~HCH----~gm~~~~ 527 (535)
.||.|.|||| .||...|
T Consensus 82 ~~G~y~y~C~~H~~~GM~G~i 102 (106)
T 2gim_A 82 PAGEYTFYCEPHRGAGMVGKI 102 (106)
T ss_dssp CSEEEEEECTTTGGGTCEEEE
T ss_pred CCceEEEEeCChhhcCcEEEE
Confidence 9999999997 2676654
No 105
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=97.59 E-value=0.00026 Score=58.71 Aligned_cols=61 Identities=25% Similarity=0.280 Sum_probs=48.7
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecC
Q 009392 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPF 285 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~ 285 (535)
+.+++++|++++|++.|.... .+.|.+.+. | -+..+.||+.+++.+.+++ ||.|+++|+..
T Consensus 38 ~~i~v~~G~~V~~~~~n~d~~-~H~~~i~~~--------~--------~~~~i~pG~~~~~~f~~~~-~G~y~~~C~~~ 98 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKSPI-SEGFSIDAF--------G--------VQEVIKAGETKTISFTADK-AGAFTIWCQLH 98 (112)
T ss_dssp CEEEEETTCEEEEEEEECSSS-CEEEEEGGG--------T--------EEEEECTTCEEEEEEECCS-CEEEEEBCSSS
T ss_pred CEEEEeCCCEEEEEEEECCCC-eEEEEEcCC--------C--------ceeEeCCCCEEEEEEECCC-CEEEEEECCCC
Confidence 789999999999999999854 333444432 1 1567999999999999986 89999999864
No 106
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=97.51 E-value=0.00011 Score=58.28 Aligned_cols=65 Identities=15% Similarity=0.184 Sum_probs=48.8
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCC
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXX 511 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adn 511 (535)
.+.++.|++|.|+ |.+ ...|.+|+++. + +...++..+++++...+.| +.
T Consensus 20 ~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~---------~---------------~~~~~~~~~~~g~~~~~~f--~~ 68 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNK---LAPHNVVVEGQ---------P---------------ELSHKDLAFSPGETFEATF--SE 68 (91)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEETTC---------G---------------GGCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCC---------C---------------ccCcccceeCCCCEEEEEe--CC
Confidence 4689999999886 432 46899999872 0 1114778889998888887 89
Q ss_pred CCCCeeeec----cCceeee
Q 009392 512 XXXAQIIQE----YGLCIAI 527 (535)
Q Consensus 512 PG~w~~HCH----~gm~~~~ 527 (535)
||.|.|||+ .||...|
T Consensus 69 ~G~y~~~C~~H~~~gM~g~i 88 (91)
T 1bxv_A 69 PGTYTYYCEPHRGAGMVGKI 88 (91)
T ss_dssp CEEEEEECTTTGGGTCEEEE
T ss_pred CEEEEEEeCCCccCCCEEEE
Confidence 999999998 2666554
No 107
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=97.46 E-value=0.00014 Score=58.65 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=51.5
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCC
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXX 511 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adn 511 (535)
.+.++.|++|+| .|.+ ...|.+|+|+..+- .| + +. ...++|+..+.++....++|. .
T Consensus 19 ~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~p-----~~-~---------~~-~~~~~~~~~~~pG~~~~~tf~--~ 75 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNA---GFPHNIVFDEDAIP-----SG-V---------NA-DAISRDDYLNAPGETYSVKLT--A 75 (98)
T ss_dssp EEEECTTCEEEE--EECS---SCCEEEEECGGGSC-----TT-C---------CH-HHHCEEEEECSTTCEEEEECC--S
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCCC-----Cc-c---------cc-ccccccceecCCCCEEEEEeC--C
Confidence 478999999988 4543 56899999874210 00 0 00 013468899999999999885 8
Q ss_pred CCCCeeeec--c--Cceeee
Q 009392 512 XXXAQIIQE--Y--GLCIAI 527 (535)
Q Consensus 512 PG~w~~HCH--~--gm~~~~ 527 (535)
||.|.|||+ . ||...|
T Consensus 76 ~G~y~y~C~~H~~~gM~G~i 95 (98)
T 2plt_A 76 AGEYGYYCEPHQGAGMVGKI 95 (98)
T ss_dssp CEEEEEECGGGGGGTCEEEE
T ss_pred CeEEEEEcCCccccCCeEEE
Confidence 999999996 3 776654
No 108
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=97.46 E-value=5.7e-05 Score=61.06 Aligned_cols=71 Identities=7% Similarity=0.040 Sum_probs=51.0
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCc-cceEEeCCCCEEEECCCCC
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVE-RNTIGVPSGGWVAIRXXXX 510 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~-RDTv~vp~~g~~virf~ad 510 (535)
.+.++.|++|.|+ |.+ ...|.+|+++..+- +.. .+.+ .|+..+.++....+.| +
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~~----------------~~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--ADT----------------AAKLSHKGLLFAAGESFTSTF--T 74 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HHH----------------HHHHCEEEEECSTTCEEEEEC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--ccc----------------cccccccccccCCCCEEEEEc--C
Confidence 4789999999987 532 46899999874321 000 0111 5788999999988888 7
Q ss_pred CCCCCeeeec----cCceeee
Q 009392 511 XXXXAQIIQE----YGLCIAI 527 (535)
Q Consensus 511 nPG~w~~HCH----~gm~~~~ 527 (535)
.||.|.|||+ .||...|
T Consensus 75 ~~G~y~~~C~~H~~~gM~G~i 95 (98)
T 1pcs_A 75 EPGTYTYYCEPHRGAGMVGKV 95 (98)
T ss_dssp SCEEEEEECGGGTTTTCEEEE
T ss_pred CCeEEEEEcCCccccCCeEEE
Confidence 8999999996 3676655
No 109
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=97.45 E-value=2.1e-05 Score=68.39 Aligned_cols=83 Identities=14% Similarity=0.031 Sum_probs=56.3
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCC--CeEEEe-ec--CC---CCCCCCCCCCCCCCCCCccceEEeCCCCEE
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGF--NFFAVG-KG--LG---NFNPKKDPKKFNLVDPVERNTIGVPSGGWV 503 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~--~F~Vl~-~g--~g---~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~ 503 (535)
.+.++.|++|+|++.|.+. ..+.|.||++.. +|.-+. .+ .| .|-+.. -....+++|..|.++...
T Consensus 34 ~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~~ 106 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGESG 106 (140)
T ss_dssp EEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEEE
T ss_pred eEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCcee
Confidence 4789999999999999311 257899999853 222110 00 00 111100 012457899999999999
Q ss_pred EECCCCCCCCCCeeeecc
Q 009392 504 AIRXXXXXXXXAQIIQEY 521 (535)
Q Consensus 504 virf~adnPG~w~~HCH~ 521 (535)
.+.|.++.||.|.|||++
T Consensus 107 ~~~~~~~~~G~y~f~C~~ 124 (140)
T 1qhq_A 107 SVTFRTPAPGTYLYICTF 124 (140)
T ss_dssp EEEEECCSSEEEEEECCS
T ss_pred EEEEEeCCCeeEEEEeCC
Confidence 999999999999999983
No 110
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=97.22 E-value=0.00017 Score=58.11 Aligned_cols=71 Identities=11% Similarity=0.167 Sum_probs=49.6
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCC
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXX 511 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adn 511 (535)
.+.++.|++|.|+ |.+ ...|.+++++..+. .+ . ....+++..+.+++...+.| +.
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~~-----~~-------~------~~~~~~~~~~~~g~~~~~tf--~~ 74 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNK---VGPHNVIFDKVPAG-----ES-------A------PALSNTKLAIAPGSFYSVTL--GT 74 (97)
T ss_dssp EEEECTTCEEEEE--ECS---SCCCCBEEEECCTT-----SC-------H------HHHCBCCCCCSCSCCEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCCCCc-----cc-------c------ccccccceecCCCCEEEEEe--CC
Confidence 4689999999886 532 46899998876541 00 0 00114667788888888887 89
Q ss_pred CCCCeeeec----cCceeee
Q 009392 512 XXXAQIIQE----YGLCIAI 527 (535)
Q Consensus 512 PG~w~~HCH----~gm~~~~ 527 (535)
||.|.|||+ .||...|
T Consensus 75 ~G~y~y~C~~H~~~gM~G~i 94 (97)
T 1b3i_A 75 PGTYSFYCTPHRGAGMVGTI 94 (97)
T ss_dssp CSEEEEECSSTTTTTCEEEE
T ss_pred CeEEEEEccChhhcCCEEEE
Confidence 999999997 3676554
No 111
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.10 E-value=0.0032 Score=52.70 Aligned_cols=89 Identities=11% Similarity=0.166 Sum_probs=54.5
Q ss_pred CCCCcEEEEec-CCEEEEEEEECCCC-------CceEEe---------CCcccC-CCCCC-CCCCC-c-ccCcCCCCCeE
Q 009392 50 KFPGPTLYARE-HDTVLVKVVNHVKY-------NVTIHW---------HGVRQL-RTGWA-DGPAY-I-TQCPIQSGHSY 108 (535)
Q Consensus 50 ~~pgP~i~~~~-Gd~v~v~v~N~l~~-------~t~iH~---------HG~~~~-~~~~~-DGvp~-~-tq~~i~PG~~~ 108 (535)
+|--..|.|+. |++|+|+|+|.... ...|-- -|+..- ...+. .+-+. + ...-|.||+++
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 45446999986 99999999999743 222221 111110 00111 01111 1 11237999999
Q ss_pred EEEEEeC--CCCcceeEecChhhhhcccEEEEEEe
Q 009392 109 VYNFTIT--GQRGTLLWHAHILWLRATVHGAIVIL 141 (535)
Q Consensus 109 ~Y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~iiV~ 141 (535)
+..|+.+ ..+|+|.|-|. +.+ ||.|.++|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 9999983 28999999998 444 999999984
No 112
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.05 E-value=0.00052 Score=60.37 Aligned_cols=85 Identities=19% Similarity=0.160 Sum_probs=52.4
Q ss_pred ceEEEcCccCCCCCCCCCCceeEEEeCCCEEEEEEEEcCCCceEEEEEcCc--eeEEEEeCCcccceeEeceEEeCCCc-
Q 009392 187 DSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLRIINAALNEELFFKIAGH--KLTVVEVDATYVKPFKTDNIVIAPGQ- 263 (535)
Q Consensus 187 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh--~~~via~DG~~v~P~~~d~l~l~pGe- 263 (535)
..+.++|... |.|+|++|++++|++.|.+....+.+.+... .+.....+ ..+.+.......|.|||
T Consensus 51 ~~~~~~g~~~----------p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~i~PG~s 119 (154)
T 2cal_A 51 PSFEVHDKKN----------PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI-DPIVAGTGFSPVPKDGKF 119 (154)
T ss_dssp SCEEETTEES----------CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCC-CSEEEEBCCCCCCBTTBE
T ss_pred ccccccCCCC----------CEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccc-cccccccccccccCCCCc
Confidence 3678888865 8999999999999999974322333333311 11000000 00000000112679999
Q ss_pred -eEEEEEEeCCCCceeEEEeec
Q 009392 264 -TTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 264 -R~dv~v~~~~~~g~y~i~~~~ 284 (535)
..++.+++ + ||.||++|+.
T Consensus 120 gt~t~tft~-~-pGtY~y~C~~ 139 (154)
T 2cal_A 120 GYTDFTWHP-T-AGTYYYVCQI 139 (154)
T ss_dssp EEEEEEECC-C-SEEEEEECCS
T ss_pred eEEEEEEEE-C-CceEEEECCC
Confidence 88888888 6 8999999973
No 113
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=96.97 E-value=0.0027 Score=51.25 Aligned_cols=61 Identities=16% Similarity=0.300 Sum_probs=48.0
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecC
Q 009392 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPF 285 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~ 285 (535)
..+++++|++++|++.|.+... +.|.+++... ...+.||+..++.+++++ ||.|.+.|...
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~-H~~~~~~~~~----------------~~~~~pg~~~~~~~t~~~-~G~Y~y~C~~H 88 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSE-HTFTIKKLGI----------------DVVVESGKEKNITVKPKS-AGTYELICRYH 88 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSC-EEEEEGGGTE----------------EEEECTTCEEEEEECCCS-CEEEEEECTTT
T ss_pred CEEEECCCCEEEEEEEcCCCce-EEEEEecCCc----------------ceeecCCcceeEEEeccc-CceEEEECccc
Confidence 5799999999999999998543 3455554332 345789999999999986 89999999743
No 114
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=96.77 E-value=0.00074 Score=54.46 Aligned_cols=75 Identities=7% Similarity=0.065 Sum_probs=50.0
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCC
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXX 511 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adn 511 (535)
.+.++.|++|.| .|.+ ...|.+|+++..|- . | ++.. . ....+|++.+.++....+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p---~--g-~~~~------~--~~~~~~~~~~~~G~~~~~~f--~~ 76 (99)
T 1byp_A 18 DLSIASGEKITF--KNNA---GFPHNDLFDKKEVP---A--G-VDVT------K--ISMPEEDLLNAPGEEYSVTL--TE 76 (99)
T ss_dssp EEEECTTEEEEE--EECS---SCCBCCEECTTSSC---T--T-CCHH------H--HSCCTTCCBCSTTCEEEEEE--CS
T ss_pred EEEECCCCEEEE--EECC---CCcceEEEeCCCCc---c--c-cccc------c--ccccccceeeCCCCEEEEEe--CC
Confidence 468999999888 4543 46899999985441 0 1 0000 0 01125667888888888877 48
Q ss_pred CCCCeeeec----cCceeee
Q 009392 512 XXXAQIIQE----YGLCIAI 527 (535)
Q Consensus 512 PG~w~~HCH----~gm~~~~ 527 (535)
||.|.|||+ .||...|
T Consensus 77 ~G~y~~~C~~H~~~gM~G~i 96 (99)
T 1byp_A 77 KGTYKFYCAPHAGAGMVGKV 96 (99)
T ss_dssp CEEEEEECGGGTTTTCEEEE
T ss_pred CcEEEEEcCCccccCCEEEE
Confidence 999999998 2666554
No 115
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=96.52 E-value=0.0029 Score=51.19 Aligned_cols=77 Identities=6% Similarity=-0.026 Sum_probs=48.3
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCc-cceEEeCCCCEEEECCCCC
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVE-RNTIGVPSGGWVAIRXXXX 510 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~-RDTv~vp~~g~~virf~ad 510 (535)
.+.++.|++|+|+ |.+ ...|.++++.-... .+.|... . ..+.+ .+++.+.++....+.| +
T Consensus 18 ~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~~~-----~~~~~~~------~-~~~~~~~~~~~~~pG~~~~~tf--~ 78 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVG---ETGHNIVFDIPAGA-----PGTVASE------L-KAASMDENDLLSEDEPSFKAKV--S 78 (102)
T ss_dssp EEEECTTCCEEEE--ECS---SSCBCCEECCCTTC-----CHHHHHH------H-HHTSCCTTCCBBTTBCEEEECC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCcccc-----cccccch------h-hcccccccceecCCCCEEEEEe--C
Confidence 4789999999986 543 46899988721000 0000000 0 01222 4677788888888888 8
Q ss_pred CCCCCeeeec----cCceeee
Q 009392 511 XXXXAQIIQE----YGLCIAI 527 (535)
Q Consensus 511 nPG~w~~HCH----~gm~~~~ 527 (535)
.||.|.|||+ .||...|
T Consensus 79 ~~G~y~y~C~~H~~~gM~G~i 99 (102)
T 1kdj_A 79 TPGTYTFYCTPHKSANMKGTL 99 (102)
T ss_dssp SCEEEEEECSTTGGGTCEEEE
T ss_pred CCeEEEEEeCCCcccCCeEEE
Confidence 9999999998 2665544
No 116
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.50 E-value=0.0037 Score=66.59 Aligned_cols=71 Identities=6% Similarity=0.066 Sum_probs=54.0
Q ss_pred eeEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCC
Q 009392 431 KAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXX 510 (535)
Q Consensus 431 ~~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~ad 510 (535)
..+.++.|+.|+|.+.|.....+..|-|+++++.+. ..+.||....++|+++
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta~ 564 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVAA 564 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEECC
Confidence 457899999999999996422345788888875322 3566778889999999
Q ss_pred CCCCCeeeec-------cCceeeeee
Q 009392 511 XXXXAQIIQE-------YGLCIAIWK 529 (535)
Q Consensus 511 nPG~w~~HCH-------~gm~~~~~~ 529 (535)
.||.|.|||| .||...|-.
T Consensus 565 ~pGtY~yhC~e~Cg~~H~gM~G~IiV 590 (595)
T 1fwx_A 565 NPGVYWYYCQWFCHALHMEMRGRMLV 590 (595)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEE
T ss_pred CCEEEEEECCCCCCCCccCCEEEEEE
Confidence 9999999998 566655543
No 117
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.47 E-value=0.008 Score=51.40 Aligned_cols=74 Identities=15% Similarity=0.182 Sum_probs=53.7
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecCh-hhhh-
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHI-LWLR- 131 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 131 (535)
..|.+..|++|++.++|.. . .|+...+.. |. ..-+.||+.-++.|.. +++|+|+|+|.. .+..
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V-----~Hsf~ip~~----~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-V-----IHGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-S-----CEEEEETTS----SC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-c-----cceEEecCC----Cc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 4899999999999999973 3 345544322 11 1236789988999997 899999999953 1122
Q ss_pred cccEEEEEEeC
Q 009392 132 ATVHGAIVILP 142 (535)
Q Consensus 132 ~Gl~G~iiV~~ 142 (535)
.+|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 69999998863
No 118
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=96.30 E-value=0.0035 Score=51.15 Aligned_cols=67 Identities=12% Similarity=0.018 Sum_probs=44.4
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCC
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXX 511 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adn 511 (535)
.+.++.|+.|+|+ |.. ...|-+|++... .|. +.+ +.-.+++|....+.| +.
T Consensus 34 ~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~~-~~~~~~pG~~~~~tf--~~ 84 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE--------------AAL-KGPMMKKEQAYSLTF--TE 84 (105)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SCE-ECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc--------------ccc-cccccCCCCEEEEEe--CC
Confidence 5789999999885 543 468988887521 111 001 112366777777776 79
Q ss_pred CCCCeeeec--cCceeee
Q 009392 512 XXXAQIIQE--YGLCIAI 527 (535)
Q Consensus 512 PG~w~~HCH--~gm~~~~ 527 (535)
||.+.|||+ .||...|
T Consensus 85 ~G~y~y~C~~H~gM~G~i 102 (105)
T 2ov0_A 85 AGTYDYHCTPHPFMRGKV 102 (105)
T ss_dssp CEEEEEECSSCTTCEEEE
T ss_pred CEEEEEEeCCCCCCEEEE
Confidence 999999996 5666554
No 119
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.13 E-value=0.019 Score=50.83 Aligned_cols=74 Identities=15% Similarity=0.193 Sum_probs=55.2
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecCh-hhhh-
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHI-LWLR- 131 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 131 (535)
..|.+..|+.|++.++|. +.. |+..++.. |+ +.-+.||+.-++.|.+ +++|+|++.|.. .+..
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DVi-----Hsf~IP~l----gi----k~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVI-----HGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSC-----EEEEETTS----SC----EEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-Cce-----EEEEECCC----Ce----EEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 589999999999999997 333 44443322 11 1235689999999997 899999999983 3444
Q ss_pred cccEEEEEEeC
Q 009392 132 ATVHGAIVILP 142 (535)
Q Consensus 132 ~Gl~G~iiV~~ 142 (535)
.+|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 79999999873
No 120
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.12 E-value=0.0063 Score=53.88 Aligned_cols=73 Identities=19% Similarity=0.403 Sum_probs=48.4
Q ss_pred eeEEE-eCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeC--------------Ccccc---e-eEeceEEeCCCceEEE
Q 009392 207 FTLPV-DSGKTYMLRIINAALNEELFFKIAGHKLTVVEVD--------------ATYVK---P-FKTDNIVIAPGQTTNV 267 (535)
Q Consensus 207 ~~~~v-~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~D--------------G~~v~---P-~~~d~l~l~pGeR~dv 267 (535)
..|+| ++|++++|.|.|.+...- .--+|.|.+...+ -.++. + ....+..|.|||++++
T Consensus 58 ~~itV~kaG~~Vtv~~~N~g~~p~---~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~sv 134 (167)
T 3ay2_A 58 KDIQVSKACKEFTITLKHTGTQPK---ASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSL 134 (167)
T ss_dssp SEEEEETTCSSEEEEEEECSCSCH---HHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred ceEEEecCCCEEEEEEEECCCCcc---ccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEE
Confidence 58999 999999999999986420 0002444333211 01221 1 1223446899999999
Q ss_pred EEEeC--CCCceeEEEee
Q 009392 268 LLSAD--KTSGKYLVAAS 283 (535)
Q Consensus 268 ~v~~~--~~~g~y~i~~~ 283 (535)
.++++ + +|.|++.|.
T Consensus 135 tf~~~~lk-pG~Y~f~Ct 151 (167)
T 3ay2_A 135 TLDPAKLA-DGDYKFACT 151 (167)
T ss_dssp EECGGGGT-TSCEEEECC
T ss_pred EEecCCCC-CcEEEEEcC
Confidence 99987 4 899999997
No 121
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=96.03 E-value=0.012 Score=49.79 Aligned_cols=77 Identities=19% Similarity=0.299 Sum_probs=47.8
Q ss_pred ceeEEE-eCCCEEEEEEEEcCCCc----eEEEEEcCce-eEEEEeCC-------cccce----eEeceEEeCCCceEEEE
Q 009392 206 GFTLPV-DSGKTYMLRIINAALNE----ELFFKIAGHK-LTVVEVDA-------TYVKP----FKTDNIVIAPGQTTNVL 268 (535)
Q Consensus 206 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~via~DG-------~~v~P----~~~d~l~l~pGeR~dv~ 268 (535)
+..|+| ++|++++|.+.|.+... .+.|.|.... +.-++.|| .++.+ ....+-.|+|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (128)
T 1nwp_A 17 TKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVT 96 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEE
Confidence 368999 99999999999999652 2333433211 00000111 22211 11223369999999999
Q ss_pred EEeC--CCCc-eeEEEee
Q 009392 269 LSAD--KTSG-KYLVAAS 283 (535)
Q Consensus 269 v~~~--~~~g-~y~i~~~ 283 (535)
++++ + +| +|++.|.
T Consensus 97 f~~~~l~-~G~~Y~f~C~ 113 (128)
T 1nwp_A 97 FDVSKLA-AGEKYGFFCS 113 (128)
T ss_dssp EEGGGSC-TTSCEEEECC
T ss_pred EeccccC-CCceEEEEEC
Confidence 9987 5 55 5999996
No 122
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=95.98 E-value=0.0076 Score=50.39 Aligned_cols=78 Identities=17% Similarity=0.296 Sum_probs=49.8
Q ss_pred ceeEEEeC-CCEEEEEEEEcCCCc----eEEEEEcCc-eeEEEEe-------CCcccce----eEeceEEeCCCceEEEE
Q 009392 206 GFTLPVDS-GKTYMLRIINAALNE----ELFFKIAGH-KLTVVEV-------DATYVKP----FKTDNIVIAPGQTTNVL 268 (535)
Q Consensus 206 ~~~~~v~~-G~~~rlRliN~~~~~----~~~~~i~gh-~~~via~-------DG~~v~P----~~~d~l~l~pGeR~dv~ 268 (535)
...|+|++ ||++||.|.|.|... .+++.|... .+.-++. |-.++++ +...+-.|+|||++++.
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vt 96 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEE
Confidence 46899986 999999999999653 233333210 0100111 2233422 23345579999999999
Q ss_pred EEeCC--CCceeEEEee
Q 009392 269 LSADK--TSGKYLVAAS 283 (535)
Q Consensus 269 v~~~~--~~g~y~i~~~ 283 (535)
++++. .+|+|.+.|.
T Consensus 97 f~~~~l~~~G~y~f~C~ 113 (125)
T 3fsa_A 97 FDVSKLKEGEQYMFFCA 113 (125)
T ss_dssp EEGGGC---CCEEEECS
T ss_pred EeCcCcCCCccEEEEcC
Confidence 99982 4799999997
No 123
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=95.98 E-value=0.014 Score=49.39 Aligned_cols=77 Identities=19% Similarity=0.282 Sum_probs=47.7
Q ss_pred ceeEEE-eCCCEEEEEEEEcCCCc----eEEEEEcCc-eeEEEE-------eCCcccc---e-eEeceEEeCCCceEEEE
Q 009392 206 GFTLPV-DSGKTYMLRIINAALNE----ELFFKIAGH-KLTVVE-------VDATYVK---P-FKTDNIVIAPGQTTNVL 268 (535)
Q Consensus 206 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh-~~~via-------~DG~~v~---P-~~~d~l~l~pGeR~dv~ 268 (535)
+..|+| ++|++++|.+.|.+... .+.|.|... .+.-++ .|-.++. + ....+-.|+|||++++.
T Consensus 16 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vt 95 (128)
T 2iaa_C 16 TKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVT 95 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEE
Confidence 357999 99999999999999642 222333211 000000 0111221 1 11234468999999999
Q ss_pred EEeC--CCCc-eeEEEee
Q 009392 269 LSAD--KTSG-KYLVAAS 283 (535)
Q Consensus 269 v~~~--~~~g-~y~i~~~ 283 (535)
++++ + +| +|.+.|.
T Consensus 96 f~~~~l~-~G~~Y~f~C~ 112 (128)
T 2iaa_C 96 FDVSKLK-EGEDYAFFCS 112 (128)
T ss_dssp EESSCCC-TTCCEEEECC
T ss_pred EeccccC-CCceEEEEEC
Confidence 9987 5 67 6999996
No 124
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.87 E-value=0.0073 Score=51.20 Aligned_cols=75 Identities=13% Similarity=0.199 Sum_probs=48.9
Q ss_pred ceeEEEeCC-CEEEEEEEEcCCCceEEEEEcCceeEEEEeC--------C-------cccc---e-eEeceEEeCCCceE
Q 009392 206 GFTLPVDSG-KTYMLRIINAALNEELFFKIAGHKLTVVEVD--------A-------TYVK---P-FKTDNIVIAPGQTT 265 (535)
Q Consensus 206 ~~~~~v~~G-~~~rlRliN~~~~~~~~~~i~gh~~~via~D--------G-------~~v~---P-~~~d~l~l~pGeR~ 265 (535)
+..|+|++| ++++|.+.|.+...- ..-+|.|.+...+ | .++. + ....+-.|+|||+.
T Consensus 17 p~~i~V~~G~~~vtv~~~N~g~~~~---~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 17 TRSISVPASCAEFTVNFEHKGHMPK---TGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CSEEEEETTCSEEEEEEEECSSSCH---HHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred cCeEEEcCCCeEEEEEEEECCCCcc---cccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 368999999 999999999986430 0013444333211 0 1111 1 01123468999999
Q ss_pred EEEEEeC--CCCceeEEEee
Q 009392 266 NVLLSAD--KTSGKYLVAAS 283 (535)
Q Consensus 266 dv~v~~~--~~~g~y~i~~~ 283 (535)
++.++++ ..||.|++.|.
T Consensus 94 svtf~~~~~~~~G~Y~f~C~ 113 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCS 113 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECC
T ss_pred EEEEeccccCCCceEEEEeC
Confidence 9999987 23899999996
No 125
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.87 E-value=0.0052 Score=52.10 Aligned_cols=78 Identities=17% Similarity=0.206 Sum_probs=47.8
Q ss_pred ceeEEE-eCCCEEEEEEEEcCCCc----eEEEEEcCce-eEEEE-------eCCcccc---e-eEeceEEeCCCceEEEE
Q 009392 206 GFTLPV-DSGKTYMLRIINAALNE----ELFFKIAGHK-LTVVE-------VDATYVK---P-FKTDNIVIAPGQTTNVL 268 (535)
Q Consensus 206 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~via-------~DG~~v~---P-~~~d~l~l~pGeR~dv~ 268 (535)
+..|+| ++|++++|.+.|.+... .+.|.|.... +.-++ .+-.++. + ....+-.|+|||+.++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 2ccw_A 17 VKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVT 96 (129)
T ss_dssp CSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEE
Confidence 358999 99999999999999642 2333333211 00000 0111221 1 11233468999999999
Q ss_pred EEeC--CCCceeEEEee
Q 009392 269 LSAD--KTSGKYLVAAS 283 (535)
Q Consensus 269 v~~~--~~~g~y~i~~~ 283 (535)
++++ ++.++|++.|.
T Consensus 97 f~~~~l~~G~~Y~f~C~ 113 (129)
T 2ccw_A 97 FDVSKIAAGENYAYFCS 113 (129)
T ss_dssp EEGGGSCTTCCEEEECC
T ss_pred EeccccCCCceEEEEeC
Confidence 9997 53356999996
No 126
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=95.74 E-value=0.0078 Score=48.31 Aligned_cols=75 Identities=5% Similarity=0.090 Sum_probs=48.8
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCC
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXX 511 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adn 511 (535)
.+.++.|++|+| .|.+ ...|-++++...+- .+...+ + ....++.+.+.++....+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p---~~~~~~---------~--~~~~~~~~~~~~G~~~~~tf--~~ 76 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP---SGVDAS---------K--ISMSEEDLLNAKGETFEVAL--SN 76 (99)
T ss_dssp EEEECTTCEEEE--EECS---SCCBCCEECTTSSC---TTCCHH---------H--HCCCTTCCBCSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCCc---cccccc---------c--cccccCccccCCCCEEEEEE--CC
Confidence 578999999988 4543 46899998875331 000000 0 01124556788888888888 49
Q ss_pred CCCCeeeec----cCceeee
Q 009392 512 XXXAQIIQE----YGLCIAI 527 (535)
Q Consensus 512 PG~w~~HCH----~gm~~~~ 527 (535)
||.|.|||+ .||...|
T Consensus 77 ~G~y~~~C~~H~~~gM~G~i 96 (99)
T 1plc_A 77 KGEYSFYCSPHQGAGMVGKV 96 (99)
T ss_dssp CEEEEEECGGGTTTTCEEEE
T ss_pred CceEEEEcCCCcccCCEEEE
Confidence 999999997 3665544
No 127
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=94.60 E-value=0.076 Score=42.33 Aligned_cols=69 Identities=19% Similarity=0.165 Sum_probs=41.9
Q ss_pred ceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeec
Q 009392 206 GFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 206 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
+..++|++|++++|+ |.+.. .+.+.+....+ .+|........+...+.||+.+++.+ + .||.|++.|..
T Consensus 17 P~~i~v~~GdtV~~~--n~~~~-~H~v~~~~~~~----p~g~~~~~~~~~~~~~~~g~~~~~tf--~-~~G~y~y~C~~ 85 (98)
T 1iuz_A 17 PSKISVAAGEAIEFV--NNAGF-PHNIVFDEDAV----PAGVDADAISYDDYLNSKGETVVRKL--S-TPGVYGVYCEP 85 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-CEEEEECTTSS----CTTCCHHHHCEEEEECSTTCEEEEEC--C-SCEEEEEECTT
T ss_pred CCEEEECCCCEEEEE--ECCCC-CEEEEEeCCCC----ccccccccccccccccCCCCEEEEEc--C-CCEEEEEEchh
Confidence 368999999988775 77642 33344332100 01111111122347899999988855 5 48999999974
No 128
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=93.80 E-value=0.061 Score=43.68 Aligned_cols=67 Identities=10% Similarity=-0.036 Sum_probs=41.4
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCC
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXX 511 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adn 511 (535)
.+.++.|++|.|+ |.+ ...|-+++.... .|. . .+ ++-.+.+|....+.| +.
T Consensus 35 ~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~-------~~~-------~-------~~-~s~~l~~g~~~~~tf--~~ 85 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VGE-------D-------AF-RGEMMTKDQAYAITF--NE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS-------S-------CE-ECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCcEEEEEeCCC-------CCc-------c-------cc-cccccCCCCEEEEEe--CC
Confidence 5789999999987 543 346666554321 010 0 01 222456777777777 79
Q ss_pred CCCCeeeec--cCceeee
Q 009392 512 XXXAQIIQE--YGLCIAI 527 (535)
Q Consensus 512 PG~w~~HCH--~gm~~~~ 527 (535)
||.+.|+|- .||...|
T Consensus 86 ~G~y~~~C~~H~~M~G~I 103 (106)
T 1id2_A 86 AGSYDYFCTPHPFMRGKV 103 (106)
T ss_dssp CEEEEEECSSCTTCEEEE
T ss_pred CEEEEEEeCCCCCCEEEE
Confidence 999999995 5554443
No 129
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=93.21 E-value=0.082 Score=44.82 Aligned_cols=67 Identities=10% Similarity=-0.042 Sum_probs=42.2
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCC
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXX 511 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adn 511 (535)
.+.++.|++|+|+ |.. ...|-+++.... .|. ..+ |+-.++++....+.| +.
T Consensus 61 ~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~~-~s~~l~pG~t~~~tF--~~ 111 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VGE--------------DAF-RGEMMTKDQAYAITF--NE 111 (132)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SCE-ECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCceEEEEeCCC-------CCc--------------ccc-cccccCCCCEEEEEc--CC
Confidence 5789999999986 543 456766654321 010 011 223456777777777 69
Q ss_pred CCCCeeeec--cCceeee
Q 009392 512 XXXAQIIQE--YGLCIAI 527 (535)
Q Consensus 512 PG~w~~HCH--~gm~~~~ 527 (535)
||.+.|+|- .||...|
T Consensus 112 ~G~y~y~C~~H~gM~G~I 129 (132)
T 3c75_A 112 AGSYDYFCTPHPFMRGKV 129 (132)
T ss_dssp CEEEEEECSSCTTCEEEE
T ss_pred CEEEEEEeCCCcCCEEEE
Confidence 999999994 5555443
No 130
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.06 E-value=0.38 Score=50.50 Aligned_cols=64 Identities=25% Similarity=0.301 Sum_probs=50.7
Q ss_pred ceeEEEeCCCEEEEEEEEcCC--CceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEee
Q 009392 206 GFTLPVDSGKTYMLRIINAAL--NEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAAS 283 (535)
Q Consensus 206 ~~~~~v~~G~~~rlRliN~~~--~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~ 283 (535)
+..|+|+.|+++||.+.|... .-.+.|.|.++.+. +.+.||+...+.+++++ ||.|++.|.
T Consensus 557 P~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------~DaiPGrtnsvtFtadk-PGvY~y~CS 619 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------MEISPQQTSSITFVADK-PGLHWYYCS 619 (638)
T ss_dssp CCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECCS-CEEEEEECC
T ss_pred CCEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------eeeCCCCeEEEEEEcCC-CEEEEEECC
Confidence 368999999999999999753 34566777665432 36899999999999997 899999998
Q ss_pred cCC
Q 009392 284 PFM 286 (535)
Q Consensus 284 ~~~ 286 (535)
.++
T Consensus 620 E~C 622 (638)
T 3sbq_A 620 WFC 622 (638)
T ss_dssp SCC
T ss_pred CcC
Confidence 643
No 131
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=92.89 E-value=0.45 Score=40.37 Aligned_cols=61 Identities=18% Similarity=0.422 Sum_probs=46.1
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCC
Q 009392 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFM 286 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~ 286 (535)
..+.++.|+++||++-|.. ..+.|.+.+..+ .+.+.||+.-.+.+++++ +|.|.+.|..++
T Consensus 60 ~~l~Vp~G~~V~~~vts~D--V~Hsf~ip~~~~----------------k~d~~PG~~~~~~~~~~~-~G~y~~~C~e~C 120 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD--VIHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKR-PGEYRIICNQYC 120 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS--SCEEEEETTSSC----------------EEEECBTBCEEEEEECCS-CEEEEEECCSCC
T ss_pred CEEEEcCCCEEEEEEEeCC--ccceEEecCCCc----------------eeEeCCCCcEEEEEEcCC-CEEEEEECcccC
Confidence 4789999999999998864 344455544332 245788988889999986 899999997654
No 132
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=92.23 E-value=0.073 Score=44.53 Aligned_cols=61 Identities=11% Similarity=0.231 Sum_probs=40.6
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecC
Q 009392 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPF 285 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~ 285 (535)
..++|++|++++|.+-|. +|.+... ++ ..|.....+.+.||+.+++.+ + .||.|++.|.+.
T Consensus 21 ~~i~V~~GdtV~f~~~~~-----------~H~v~~~--~~--~~P~g~~~f~~~pg~t~s~TF--~-~pG~y~y~C~~H 81 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK-----------SHNVEAI--KE--ILPEGVESFKSKINESYTLTV--T-EPGLYGVKCTPH 81 (123)
T ss_dssp SEEEECTTEEEEEEESST-----------TCCCEEC--TT--SSCTTCCCCBCCTTCCEEEEE--C-SCEEEEEECGGG
T ss_pred CEEEECCCCEEEEEECCC-----------CceEEEc--CC--cCCCCccceecCCCCEEEEEe--C-CCeEEEEEeCCC
Confidence 588999999988877663 2444432 11 112222345567999888776 5 489999999853
No 133
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=91.35 E-value=0.87 Score=40.07 Aligned_cols=62 Identities=18% Similarity=0.429 Sum_probs=47.6
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCC
Q 009392 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFM 286 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~ 286 (535)
..+.++.|+.+||++-|. .-.+.|.|.+..+ .+.+.||+.-.+.+.+++ ||.|++.|.-++
T Consensus 93 n~l~VP~G~~Vr~~vTS~--DViHsf~IP~lgi----------------k~da~PG~~n~~~~~~~k-pG~y~g~Cse~C 153 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP--DVIHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKR-PGEYRIICNQYC 153 (168)
T ss_dssp SSEEEETTSEEEEEEECS--SSCEEEEETTSSC----------------EEEECTTBCEEEEEECCS-CEEEEEECCSCC
T ss_pred CEEEEeCCCeEEEEEecC--CceEEEEECCCCe----------------EEEecCCceeEEEEEeCC-CEEEEEECCcCC
Confidence 468899999999999986 3455566665433 345679998999999997 899999998554
Q ss_pred C
Q 009392 287 D 287 (535)
Q Consensus 287 ~ 287 (535)
.
T Consensus 154 G 154 (168)
T 3s8f_B 154 G 154 (168)
T ss_dssp S
T ss_pred C
Confidence 3
No 134
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=88.62 E-value=0.41 Score=39.81 Aligned_cols=60 Identities=20% Similarity=0.331 Sum_probs=37.8
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeec
Q 009392 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
..++|++|++++|+ |.+. +|.+.+.+ |. + |-....+.+.+|+.+++.+ ++ +|.|++.|..
T Consensus 21 ~~i~V~~GdtV~f~--n~d~---------~H~v~~~~--~~-~-p~~~~~~~~~~g~t~~~tF--~~-~G~y~y~C~~ 80 (122)
T 2ux6_A 21 ASLKVAPGDTVTFI--PTDK---------GHNVETIK--GM-I-PDGAEAFKSKINENYKVTF--TA-PGVYGVKCTP 80 (122)
T ss_dssp SEEEECTTEEEEEE--ESSS---------SCCCEECT--TC-S-CTTCCCCBCCTTCCEEEEE--CS-CEEEEEEETT
T ss_pred CEEEECCCCEEEEE--ECCC---------CcEEEEcc--cc-c-CCCcceeecCCCCEEEEEe--CC-CEEEEEEeCC
Confidence 68999999988875 5543 35444321 10 1 1111234557999877765 54 8999999974
No 135
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=88.24 E-value=0.35 Score=40.29 Aligned_cols=60 Identities=17% Similarity=0.315 Sum_probs=37.0
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeec
Q 009392 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
..++|++|++++|. |.+. +|.+... ++ ..|.....+.+.||+.+++.+ ++ +|.|++.|..
T Consensus 21 ~~i~V~~GdtV~f~--~~~~---------~H~v~~~--~~--~~p~~~~~~~~~pG~t~~~tF--~~-~G~y~y~C~~ 80 (123)
T 1paz_A 21 AYIKANPGDTVTFI--PVDK---------GHNVESI--KD--MIPEGAEKFKSKINENYVLTV--TQ-PGAYLVKCTP 80 (123)
T ss_dssp SEEEECTTCEEEEE--ESSS---------SCCCEEC--TT--CSCTTCCCCBCCTTCCEEEEC--CS-CEEEEEECTT
T ss_pred CEEEECCCCEEEEE--ECCC---------CeEEEEe--cc--cCCCCccceecCCCCEEEEEe--CC-CEEEEEEeCC
Confidence 68999999998775 4442 2555432 11 011111234457999877655 54 8999999974
No 136
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=87.46 E-value=0.39 Score=40.24 Aligned_cols=30 Identities=10% Similarity=-0.013 Sum_probs=22.4
Q ss_pred CCCCEEEECCCCCCCCCCeeee--c--cCceeeeee
Q 009392 498 PSGGWVAIRXXXXXXXXAQIIQ--E--YGLCIAIWK 529 (535)
Q Consensus 498 p~~g~~virf~adnPG~w~~HC--H--~gm~~~~~~ 529 (535)
.++....+.| +.||.|.|+| | .||...|-.
T Consensus 61 ~pGet~s~TF--~~pG~y~y~C~~H~~~GM~G~I~V 94 (127)
T 3tu6_A 61 KINEEITVTL--SKPGVYMYQCAPHVGMGMIGAIVV 94 (127)
T ss_dssp CTTCCCEEEC--CSCEEEEEECTTTGGGTCEEEEEE
T ss_pred CCCCEEEEEe--CCCeEEEEEeCCCCcCCcEEEEEE
Confidence 3566667777 7999999999 4 667777643
No 137
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=87.41 E-value=0.34 Score=40.37 Aligned_cols=60 Identities=22% Similarity=0.354 Sum_probs=37.7
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeec
Q 009392 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASP 284 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~ 284 (535)
..++|++|++++|. |.+. +|.+... ++. .|-....+.+.||+.+++.+ ++ +|.|++.|..
T Consensus 21 ~~i~V~~GdtV~f~--n~~~---------~H~v~~~--~~~--~p~~~~~~~~~pG~t~~~tF--~~-~G~y~y~C~~ 80 (123)
T 1pmy_A 21 ALVRLKPGDSIKFL--PTDK---------GHNVETI--KGM--APDGADYVKTTVGQEAVVKF--DK-EGVYGFKCAP 80 (123)
T ss_dssp SEEEECTTCEEEEE--CSSS---------SCCCEEC--TTS--SCTTCCCCBCCTTSCEEEEC--CS-CEEEEEECST
T ss_pred CEEEECCCCEEEEE--ECCC---------CcEEEEe--ccc--CCCCccceecCCCCEEEEEe--CC-CeEEEEEeCC
Confidence 68999999987764 5442 3555432 110 11111234567999877655 54 8999999974
No 138
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=87.34 E-value=0.72 Score=38.44 Aligned_cols=66 Identities=9% Similarity=0.076 Sum_probs=41.2
Q ss_pred eEEeeCCCEEEEEEecCCCCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEECCCCCC
Q 009392 432 AYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRXXXXX 511 (535)
Q Consensus 432 ~~~v~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~RDTv~vp~~g~~virf~adn 511 (535)
.+.++.|++|+|+..+ ..|-+..+. +.+... .+...+.++....+.| +.
T Consensus 23 ~i~V~~GDTV~f~n~~------~~Hnv~~~~----------~~~p~g-------------~~~~~~~pg~t~s~TF--~~ 71 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD------KSHNAESVR----------EVWPEG-------------VAPVKGGFSKEVVFNA--EK 71 (124)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECT----------TTSCTT-------------SCCCBCCTTCCEEEEC--CS
T ss_pred EEEECCCCEEEEEECC------CCccEEEeC----------CcCCCC-------------ccccccCCCCEEEEEe--CC
Confidence 5789999999997543 355555431 111100 0112234677777777 79
Q ss_pred CCCCeeeec----cCceeeee
Q 009392 512 XXXAQIIQE----YGLCIAIW 528 (535)
Q Consensus 512 PG~w~~HCH----~gm~~~~~ 528 (535)
||.|.|+|- .||...|-
T Consensus 72 ~G~y~Y~C~~H~~~GM~G~I~ 92 (124)
T 3ef4_A 72 EGLYVLKCAPHYGMGMVVLVQ 92 (124)
T ss_dssp SEEEEEECTTTGGGTCEEEEE
T ss_pred CeEEEEEcCCCCcCCCEEEEE
Confidence 999999995 57776664
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=87.00 E-value=5.2 Score=32.87 Aligned_cols=72 Identities=17% Similarity=0.203 Sum_probs=50.5
Q ss_pred CCCEE--EEEEEEcCCCceEEEEEc-Cce--eEEEEeCCcccc--------eeEeceEEeCCCceEEEEEEeCC--CCce
Q 009392 213 SGKTY--MLRIINAALNEELFFKIA-GHK--LTVVEVDATYVK--------PFKTDNIVIAPGQTTNVLLSADK--TSGK 277 (535)
Q Consensus 213 ~G~~~--rlRliN~~~~~~~~~~i~-gh~--~~via~DG~~v~--------P~~~d~l~l~pGeR~dv~v~~~~--~~g~ 277 (535)
.|+.+ .|.+.|.+... ..+.+. |+. |.|...+|..+- .+......|.|||...+-.+.++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~~~-v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERA-IEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSSC-EEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCCc-EEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 55554 57789998544 446665 555 444444576651 34567899999999999999985 4799
Q ss_pred eEEEeecC
Q 009392 278 YLVAASPF 285 (535)
Q Consensus 278 y~i~~~~~ 285 (535)
|.+++-..
T Consensus 95 Ytl~a~l~ 102 (120)
T 3isy_A 95 YEVKVTFK 102 (120)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 99998743
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=80.46 E-value=7.7 Score=35.02 Aligned_cols=62 Identities=15% Similarity=0.156 Sum_probs=45.6
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCC
Q 009392 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFM 286 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~ 286 (535)
..+.++.|+.+||+|-+.. -.+.|.|..... .+..-||..-.+.+.+++ +|.|+..|.-++
T Consensus 41 n~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgv----------------K~daiPGr~n~l~~~~~~-pG~y~g~CsE~C 101 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS--VMHSFFIPRLGS----------------QIYAMAGMQTRLHLIANE-PGTYDGICAEIC 101 (205)
T ss_dssp SEEEEETTSCEEEEEEESS--SCEEEEEGGGTE----------------EEEECTTCCEEEEECCSS-SEEEEEEECSCC
T ss_pred ceEEEeCCCEEEEEEecCC--ceeeEEecccCc----------------EEEecCCceEEEEEEeCC-CeEEEEEccccc
Confidence 3688999999999998764 344455554433 334557888888888886 899999998665
Q ss_pred C
Q 009392 287 D 287 (535)
Q Consensus 287 ~ 287 (535)
.
T Consensus 102 G 102 (205)
T 1cyx_A 102 G 102 (205)
T ss_dssp S
T ss_pred c
Confidence 4
No 141
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=80.40 E-value=14 Score=30.30 Aligned_cols=62 Identities=10% Similarity=0.158 Sum_probs=43.0
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCC---cccCcCCCCCeEEEEEEeCC--CCcceeEecC
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAY---ITQCPIQSGHSYVYNFTITG--QRGTLLWHAH 126 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~---~tq~~i~PG~~~~Y~~~~~~--~~Gt~wYH~H 126 (535)
=+|+...|++..+.|.+... ...| .|+||-.. +....|+||++.+|+...++ .+|+|..+.=
T Consensus 34 v~l~f~Sgq~~Df~v~d~~G---~~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 34 IEFQFSTGQKFELVVYDSEH---KERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKVT 100 (120)
T ss_dssp EEEEESSSCCEEEEEECTTC---CEEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEEE
T ss_pred EEEEeCCCCEEEEEEECCCC---CEEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEEE
Confidence 48888888888888887532 2223 24666432 23456999999999999952 5799987764
No 142
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=65.96 E-value=14 Score=29.97 Aligned_cols=47 Identities=26% Similarity=0.456 Sum_probs=32.3
Q ss_pred EEEEEEEEcCCCc-eEEEEEcCce-eEEEEeCCcccceeEeceEEeCCCceEEEEEEeC
Q 009392 216 TYMLRIINAALNE-ELFFKIAGHK-LTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSAD 272 (535)
Q Consensus 216 ~~rlRliN~~~~~-~~~~~i~gh~-~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~ 272 (535)
.|+|+|+|.+... .+.+++.|.. +.++ | + ..+.|.|||..++-|...
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~---~~i~v~~g~~~~~~v~v~ 82 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----K---QTIQVEPGEVLNLPMSLG 82 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE---S----C---CEEEECTTCEEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe---C----C---CcEEECCCCEEEEEEEEE
Confidence 6999999999665 6677777642 3332 1 2 149999999877766543
No 143
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=63.81 E-value=24 Score=33.17 Aligned_cols=63 Identities=14% Similarity=0.249 Sum_probs=45.6
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCC
Q 009392 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFM 286 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~ 286 (535)
..+.++.|+.+|+++-+.. -.+.|.+.+...+ +..-||..-.+.+.+++ ||.|...|.-++
T Consensus 171 n~l~lP~g~~v~~~~tS~D--ViHsf~ip~l~~k----------------~da~PG~~n~~~~~~~~-~G~y~g~Cse~C 231 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD--VIHSWTVPAFGVK----------------QDAVPGRLAQLWFRAER-EGIFFGQCSELC 231 (262)
T ss_dssp SCEEEETTSEEEEEEEESS--SCEEEEEGGGTEE----------------EEECBTCCEEEEEECCS-CEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEECc--ccceeeecccCce----------------EEecCCceeEEEEecCC-cEEEEEEChHhc
Confidence 4689999999999998664 3444566544333 33457777788888886 899999998654
Q ss_pred CC
Q 009392 287 DA 288 (535)
Q Consensus 287 ~~ 288 (535)
..
T Consensus 232 G~ 233 (262)
T 2gsm_B 232 GI 233 (262)
T ss_dssp ST
T ss_pred cc
Confidence 43
No 144
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=62.47 E-value=26 Score=33.65 Aligned_cols=62 Identities=18% Similarity=0.295 Sum_probs=45.9
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCC
Q 009392 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFM 286 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~ 286 (535)
..+.++.|+.+||++-+.. -.+.|.|.....+ +..-||..-.+.+.+++ ||.|...|.-++
T Consensus 189 N~lvlP~g~~V~~~ltS~D--ViHsf~iP~lg~k----------------~daiPG~~n~~~~~~~~-~G~y~g~CsE~C 249 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD--VIHAWTIPAFAVK----------------QDAVPGRIAQLWFSVDQ-EGVYFGQCSELC 249 (298)
T ss_dssp SCEEEESSSEEEEEEEESS--SCEEEEEGGGTEE----------------EEECTTCCEEEEEECSS-SEEEEECCCSCC
T ss_pred ceEEEEcCCEEEEEEEeCC--ccceeeEcccCce----------------EEecCCceEEEEEEeCC-CEEEEEEccccc
Confidence 4789999999999998754 3444566544333 34567888888888886 899999998654
Q ss_pred C
Q 009392 287 D 287 (535)
Q Consensus 287 ~ 287 (535)
.
T Consensus 250 G 250 (298)
T 3hb3_B 250 G 250 (298)
T ss_dssp S
T ss_pred C
Confidence 4
No 145
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=58.86 E-value=22 Score=32.03 Aligned_cols=73 Identities=12% Similarity=-0.044 Sum_probs=51.8
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecCh-hhhh-
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHI-LWLR- 131 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 131 (535)
..|.+..|+.|++.|++. +.- ||..++.- ++ +.-+-||..-+..|.+ +++|+|+..|.. .+..
T Consensus 41 n~l~lP~g~~V~~~lTS~-DVi-----HSF~IP~l-------gv-K~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~H 105 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SVM-----HSFFIPRL-------GS-QIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGH 105 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SSC-----EEEEEGGG-------TE-EEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTS
T ss_pred ceEEEeCCCEEEEEEecC-Cce-----eeEEeccc-------Cc-EEEecCCceEEEEEEe-CCCeEEEEEcccccccch
Confidence 379999999999999997 222 44444322 11 1234578888889987 899999999863 3333
Q ss_pred cccEEEEEEe
Q 009392 132 ATVHGAIVIL 141 (535)
Q Consensus 132 ~Gl~G~iiV~ 141 (535)
+.|.+.++|.
T Consensus 106 s~M~~~v~vv 115 (205)
T 1cyx_A 106 SGMKFKAIAT 115 (205)
T ss_dssp TTCCEEEEEE
T ss_pred hhceEEEEEE
Confidence 6788888877
No 146
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=56.48 E-value=4.2 Score=40.14 Aligned_cols=26 Identities=15% Similarity=0.277 Sum_probs=18.4
Q ss_pred CcCCCCCeEEEEEEeCC-----CCcceeEec
Q 009392 100 CPIQSGHSYVYNFTITG-----QRGTLLWHA 125 (535)
Q Consensus 100 ~~i~PG~~~~Y~~~~~~-----~~Gt~wYH~ 125 (535)
..|+||++.+.+|++.. +.|+|-+..
T Consensus 95 ~~L~pG~Sve~~~dla~~ydLs~gG~y~v~~ 125 (343)
T 2x3c_A 95 QLLKAGQSLTVQAEVSGLYDMSAQGQYSIRY 125 (343)
T ss_dssp EEECTTCEEEEEEECTTTBTCCSCEEEEEEE
T ss_pred EEeCCCCeEEEEEehhhccccCCCceEEEEE
Confidence 45899999999999821 345555544
No 147
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=53.49 E-value=40 Score=30.89 Aligned_cols=63 Identities=13% Similarity=0.131 Sum_probs=44.5
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCC
Q 009392 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFM 286 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~ 286 (535)
..+.++.|+.+|+++-.+- -.+.|.+.....+ +..-||..-.+-+.+++ ||.|...|.-++
T Consensus 140 n~lvlP~~~~Vr~~vtS~D--ViHsf~vP~lg~K----------------~DaiPGr~n~~~~~~~~-~G~y~g~Cse~C 200 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED--VLHSWAVPSLGLK----------------TDAIPGRLNQTTLMSSR-PGLYYGQCSEIC 200 (227)
T ss_dssp SCEEEETTSCEEEEEEESS--SCEEEEEGGGTEE----------------EEECTTCCEEEEECCSS-CEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEeCc--ccceeeecccCcE----------------EEecCCceEEEEEecCC-cEEEEEEehhhc
Confidence 5789999999999987654 3444555544332 33457777777888886 899999998654
Q ss_pred CC
Q 009392 287 DA 288 (535)
Q Consensus 287 ~~ 288 (535)
..
T Consensus 201 G~ 202 (227)
T 1v54_B 201 GS 202 (227)
T ss_dssp ST
T ss_pred cc
Confidence 43
No 148
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=50.21 E-value=29 Score=28.65 Aligned_cols=70 Identities=13% Similarity=0.193 Sum_probs=40.3
Q ss_pred EEEECCCCCCcEEEEecCCEEEEEEEECCC---C--CceEE--eCCcccCCC-CCCCCCCCcccCcCCCCCeEEEEEEe
Q 009392 44 IVTVNRKFPGPTLYAREHDTVLVKVVNHVK---Y--NVTIH--WHGVRQLRT-GWADGPAYITQCPIQSGHSYVYNFTI 114 (535)
Q Consensus 44 ~~~~NG~~pgP~i~~~~Gd~v~v~v~N~l~---~--~t~iH--~HG~~~~~~-~~~DGvp~~tq~~i~PG~~~~Y~~~~ 114 (535)
...++|--+.+.=.+..|..+.|.+.=..+ . .+.+| ..|+..+-. ...|+=-+ +.|||.+|+.++|.+..
T Consensus 15 ~V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 15 KVMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp EEEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred EEEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEe
Confidence 345555313445677888888887772221 1 22333 245554321 11344222 56999999999999776
No 149
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=49.62 E-value=6.9 Score=32.44 Aligned_cols=17 Identities=12% Similarity=0.112 Sum_probs=16.2
Q ss_pred EEEEecCCEEEEEEEEC
Q 009392 55 TLYAREHDTVLVKVVNH 71 (535)
Q Consensus 55 ~i~~~~Gd~v~v~v~N~ 71 (535)
-|.|+.|++|++.+.|+
T Consensus 72 ~InV~~GETVrF~v~nk 88 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEK 88 (131)
T ss_dssp EEEEETTCEEEEEETTE
T ss_pred EEEecCCCEEEEEeCCc
Confidence 59999999999999998
No 150
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=44.35 E-value=50 Score=32.23 Aligned_cols=16 Identities=19% Similarity=0.438 Sum_probs=14.5
Q ss_pred cCcCCCCCeEEEEEEe
Q 009392 99 QCPIQSGHSYVYNFTI 114 (535)
Q Consensus 99 q~~i~PG~~~~Y~~~~ 114 (535)
..||+|||+.+.+.++
T Consensus 319 ~~pI~PGETr~~~v~a 334 (382)
T 1yew_A 319 NSPLAPGETRTVDVTA 334 (382)
T ss_dssp CSCBCTTCEEEEEEEE
T ss_pred CCCcCCCceeEEEEEe
Confidence 4789999999999988
No 151
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=42.36 E-value=57 Score=30.59 Aligned_cols=75 Identities=12% Similarity=0.061 Sum_probs=51.5
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecCh-hhhh-
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHI-LWLR- 131 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 131 (535)
..|.+..|+.|++.+++.. .- ||..++.- ++. .-.-||..-+..|.+ +++|+|+..|.. .+..
T Consensus 171 n~l~lP~g~~v~~~~tS~D-Vi-----Hsf~ip~l-------~~k-~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD-VI-----HSWTVPAF-------GVK-QDAVPGRLAQLWFRA-EREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEESS-SC-----EEEEEGGG-------TEE-EEECBTCCEEEEEEC-CSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEECc-cc-----ceeeeccc-------Cce-EEecCCceeEEEEec-CCcEEEEEEChHhcccCc
Confidence 4699999999999999872 22 44443322 111 124568888888987 899999999873 3333
Q ss_pred cccEEEEEEeCC
Q 009392 132 ATVHGAIVILPK 143 (535)
Q Consensus 132 ~Gl~G~iiV~~~ 143 (535)
+.|.+.+.|.++
T Consensus 236 ~~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 AYMPITVKVVSE 247 (262)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 677777777654
No 152
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=42.36 E-value=59 Score=26.22 Aligned_cols=67 Identities=10% Similarity=-0.043 Sum_probs=37.9
Q ss_pred CcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCC--------cccCcCCCCCeEEEEEEeCCCCcc
Q 009392 53 GPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAY--------ITQCPIQSGHSYVYNFTITGQRGT 120 (535)
Q Consensus 53 gP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~--------~tq~~i~PG~~~~Y~~~~~~~~Gt 120 (535)
|-+|.++.||++.|.|.-+-.....=......-...--.+|.-- .....+..|+...+.|++ ..+|+
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~ 88 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGH 88 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSS
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCce
Confidence 45799999999999999775444333333211000000111100 001225668899999998 67886
No 153
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=41.57 E-value=39 Score=27.89 Aligned_cols=69 Identities=22% Similarity=0.267 Sum_probs=38.9
Q ss_pred EEECCCCCCcEEEEecCCEEEEEEE---ECCCCCce--EE--eCCcccCC-CCCCCCCCCcccCcCCCCCeEEEEEEe
Q 009392 45 VTVNRKFPGPTLYAREHDTVLVKVV---NHVKYNVT--IH--WHGVRQLR-TGWADGPAYITQCPIQSGHSYVYNFTI 114 (535)
Q Consensus 45 ~~~NG~~pgP~i~~~~Gd~v~v~v~---N~l~~~t~--iH--~HG~~~~~-~~~~DGvp~~tq~~i~PG~~~~Y~~~~ 114 (535)
..++|= +.+.=.+..|..+.|.+. |....... +| .-|+..+. .+..|+=..-+.|||.+|+.++|.+.+
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~l 94 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKL 94 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEe
Confidence 445552 235566778888877776 22222222 22 23444431 111344322246999999999999877
No 154
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=39.95 E-value=29 Score=33.56 Aligned_cols=62 Identities=15% Similarity=0.178 Sum_probs=43.8
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCCCceeEEEeecCC
Q 009392 207 FTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKTSGKYLVAASPFM 286 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~~g~y~i~~~~~~ 286 (535)
..+.++.|+.+||++-... -.+.|.|..... .+..-||..-.+-+.+++ ||.|...|.-++
T Consensus 151 n~l~lP~g~~V~~~lTS~D--ViHsf~IP~lg~----------------k~DaiPGr~n~~~~~~~~-~G~y~g~CsE~C 211 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSNS--VMNSFFIPRLGS----------------QIYAMAGMQTRLHLIANE-PGTYDGISASYS 211 (315)
T ss_dssp SBCCCCSSSEEEEEECBSS--SCEEEEEGGGTE----------------EEEECBTSCEEEEEECCS-CBCCEEBCCSCC
T ss_pred ceEEEeCCCEEEEEEEeCC--ccceeeecccCc----------------EEeecCCcceeeEEecCC-CeEEEEeccccc
Confidence 3677999999999886543 444455554433 334557877888888886 899999998654
Q ss_pred C
Q 009392 287 D 287 (535)
Q Consensus 287 ~ 287 (535)
.
T Consensus 212 G 212 (315)
T 1fft_B 212 G 212 (315)
T ss_dssp S
T ss_pred h
Confidence 3
No 155
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=39.89 E-value=74 Score=30.42 Aligned_cols=76 Identities=14% Similarity=0.092 Sum_probs=52.0
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecCh-hhhh-
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHI-LWLR- 131 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 131 (535)
..|.+..|+.|++.+++.. .| |+..++.- ++. .-.-||..-+..|.+ +++|+|+..|.. .+..
T Consensus 189 N~lvlP~g~~V~~~ltS~D----Vi--Hsf~iP~l-------g~k-~daiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD----VI--HAWTIPAF-------AVK-QDAVPGRIAQLWFSV-DQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SCEEEESSSEEEEEEEESS----SC--EEEEEGGG-------TEE-EEECTTCCEEEEEEC-SSSEEEEECCCSCCSTTT
T ss_pred ceEEEEcCCEEEEEEEeCC----cc--ceeeEccc-------Cce-EEecCCceEEEEEEe-CCCEEEEEEcccccCcCc
Confidence 5799999999999999963 22 34333221 111 224578888889987 899999999873 3333
Q ss_pred cccEEEEEEeCCC
Q 009392 132 ATVHGAIVILPKR 144 (535)
Q Consensus 132 ~Gl~G~iiV~~~~ 144 (535)
..|.+.+.|.+++
T Consensus 254 s~M~~~v~vvs~~ 266 (298)
T 3hb3_B 254 AYMPIVVKAVSQE 266 (298)
T ss_dssp TSCCEEEEEECHH
T ss_pred cCCeeEEEEEcHH
Confidence 6777777777543
No 156
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=39.64 E-value=1.3e+02 Score=24.73 Aligned_cols=64 Identities=14% Similarity=0.168 Sum_probs=37.0
Q ss_pred CcEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCCCCCCC--------CCcccCcCCCCCeEEEEEEeCCCCcc
Q 009392 53 GPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGP--------AYITQCPIQSGHSYVYNFTITGQRGT 120 (535)
Q Consensus 53 gP~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~~~DGv--------p~~tq~~i~PG~~~~Y~~~~~~~~Gt 120 (535)
|-+|.++.||++.|.|.-+-..+.+=..-... +..-.|++ |. ....+..|+...+.|++ ..+|+
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~~--~~~L~~~~~~v~~~y~p~-~~~~vGagG~~~w~f~A-~~~G~ 103 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGGT--KESPNESMFTVENKYFPP-DSKLLGAGGTEHFHVTV-KAAGT 103 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTTB--SSCSCTTTEEEEEEEECC-TTCCTTCCEEEEEEEEE-CSSEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecCC--CccccccceeecceeeeC-CCCCcCCCcEEEEEEEE-ccCce
Confidence 56899999999999999774332222222111 00012222 11 01235667888899988 67776
No 157
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=39.38 E-value=35 Score=28.69 Aligned_cols=55 Identities=18% Similarity=0.167 Sum_probs=29.2
Q ss_pred EEEEEECCCCCc---eEEeCCcccCCCC---CCCCCCCcccCcCCCCCeEEEEEEe--CCCCcc
Q 009392 65 LVKVVNHVKYNV---TIHWHGVRQLRTG---WADGPAYITQCPIQSGHSYVYNFTI--TGQRGT 120 (535)
Q Consensus 65 ~v~v~N~l~~~t---~iH~HG~~~~~~~---~~DGvp~~tq~~i~PG~~~~Y~~~~--~~~~Gt 120 (535)
.|++.|....+. +=||.=-+..+.- ..+||-| .|.-|.||++|+|.=-. ..+.|+
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVG-eqPvL~PGe~F~YtSg~~L~Tp~G~ 100 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVG-QQPLLAPGETFEYTSGCPLPTPIGT 100 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSS-CCCEECTTCEEEEEEEEEESSSEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEcCCcCcCCCceE
Confidence 466677766553 3466422221110 1355533 24557999988887544 334444
No 158
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=38.88 E-value=20 Score=27.97 Aligned_cols=68 Identities=12% Similarity=0.191 Sum_probs=37.1
Q ss_pred EeCCCEEEEEEEEcCCCceEEEEEcC--ceeEEEEeCCcccceeEeceEEeCCCceEEEEEEeCCC--CceeEEEeec
Q 009392 211 VDSGKTYMLRIINAALNEELFFKIAG--HKLTVVEVDATYVKPFKTDNIVIAPGQTTNVLLSADKT--SGKYLVAASP 284 (535)
Q Consensus 211 v~~G~~~rlRliN~~~~~~~~~~i~g--h~~~via~DG~~v~P~~~d~l~l~pGeR~dv~v~~~~~--~g~y~i~~~~ 284 (535)
-+|||++++|++-....... ..+ -.+++...+|..+.-. .........++..+.++.. .|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~~p---~~~~~~~v~l~dp~g~~v~~~---~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENFHP---LNELIPLVYIQDPKGNRIAQW---QSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGGCB---CCCEEEEEEEECTTSCEEEEE---EEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCCcC---CCCCceEEEEECCCCCEEEEE---EeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 68999999998765322110 111 1345555566544211 1122223455566666543 4999999874
No 159
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=38.78 E-value=43 Score=27.61 Aligned_cols=55 Identities=16% Similarity=0.244 Sum_probs=29.6
Q ss_pred EEEEEECCCCC---ceEEeCCcccCCCC---CCCCCCCcccCcCCCCCeEEEEEEe--CCCCcc
Q 009392 65 LVKVVNHVKYN---VTIHWHGVRQLRTG---WADGPAYITQCPIQSGHSYVYNFTI--TGQRGT 120 (535)
Q Consensus 65 ~v~v~N~l~~~---t~iH~HG~~~~~~~---~~DGvp~~tq~~i~PG~~~~Y~~~~--~~~~Gt 120 (535)
.|++.|....+ .+=||.=-+..+.- ..+||-| .|.-|.||++|+|.=-. ..+.|+
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtSg~~L~tp~G~ 96 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVG-EQPWLRPGEAFHYTSGVLLETEQGQ 96 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTT-BCCEECTTCEEEEEEEEEESSSCEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEeCCcCcCCCcEE
Confidence 56667776655 34477533222111 1355533 24457999988887544 334444
No 160
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=35.53 E-value=32 Score=28.67 Aligned_cols=55 Identities=16% Similarity=0.162 Sum_probs=29.1
Q ss_pred EEEEEECCCCCc---eEEeCCcccCCCC---CCCCCCCcccCcCCCCCeEEEEEEe--CCCCcc
Q 009392 65 LVKVVNHVKYNV---TIHWHGVRQLRTG---WADGPAYITQCPIQSGHSYVYNFTI--TGQRGT 120 (535)
Q Consensus 65 ~v~v~N~l~~~t---~iH~HG~~~~~~~---~~DGvp~~tq~~i~PG~~~~Y~~~~--~~~~Gt 120 (535)
.|++.|....+. +=||.=-...+.- ..+||-| .|.-|.||++|+|.=-. ..+.|+
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-eqP~L~PGe~F~YtSg~~L~Tp~G~ 95 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVG-ETPTIPPNTAYQYTSGTVLDTPFGI 95 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTT-BCCEECTTEEEEEEEEEEESSSEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEc-CCCcCCCCCceEEcCCcCcCCCceE
Confidence 466677765543 3466432221110 1355533 24557999988887544 334444
No 161
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=34.29 E-value=42 Score=27.63 Aligned_cols=49 Identities=18% Similarity=0.213 Sum_probs=26.8
Q ss_pred EEEEEECCCCC---ceEEeCCcccCCCC---CCCCCCCcccCcCCCCCeEEEEEEe
Q 009392 65 LVKVVNHVKYN---VTIHWHGVRQLRTG---WADGPAYITQCPIQSGHSYVYNFTI 114 (535)
Q Consensus 65 ~v~v~N~l~~~---t~iH~HG~~~~~~~---~~DGvp~~tq~~i~PG~~~~Y~~~~ 114 (535)
.|++.|....+ .+=||.=-...+.- ..+||-| .|.-|.||++|+|.=-.
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtSg~ 87 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVG-EQPRIKANDEYTYSSGT 87 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTT-BCCEECTTCEEEEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEc-CCCcCCCCCceEEeCCc
Confidence 46666776655 33477532221110 1355533 24457999988887544
No 162
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=34.15 E-value=67 Score=26.17 Aligned_cols=60 Identities=17% Similarity=0.145 Sum_probs=39.4
Q ss_pred EEEEecC-CEEEEEEEECCCCCceE--EeCCcccCCCCCCC-----C----CCCcccCcCCCCCeEEEEEEe
Q 009392 55 TLYAREH-DTVLVKVVNHVKYNVTI--HWHGVRQLRTGWAD-----G----PAYITQCPIQSGHSYVYNFTI 114 (535)
Q Consensus 55 ~i~~~~G-d~v~v~v~N~l~~~t~i--H~HG~~~~~~~~~D-----G----vp~~tq~~i~PG~~~~Y~~~~ 114 (535)
.|++++| .++.|+|.|.-+++.-+ |+|=......-..| | .|.-|.....||++.+.+.-.
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 5888888 78999999999988666 56544433221122 1 333344567888888877753
No 163
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=34.15 E-value=67 Score=26.17 Aligned_cols=60 Identities=17% Similarity=0.145 Sum_probs=39.4
Q ss_pred EEEEecC-CEEEEEEEECCCCCceE--EeCCcccCCCCCCC-----C----CCCcccCcCCCCCeEEEEEEe
Q 009392 55 TLYAREH-DTVLVKVVNHVKYNVTI--HWHGVRQLRTGWAD-----G----PAYITQCPIQSGHSYVYNFTI 114 (535)
Q Consensus 55 ~i~~~~G-d~v~v~v~N~l~~~t~i--H~HG~~~~~~~~~D-----G----vp~~tq~~i~PG~~~~Y~~~~ 114 (535)
.|++++| .++.|+|.|.-+++.-+ |+|=......-..| | .|.-|.....||++.+.+.-.
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 5888888 78999999999988666 56544433221122 1 333344567888888877753
No 164
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=32.98 E-value=1.5e+02 Score=24.05 Aligned_cols=23 Identities=9% Similarity=0.055 Sum_probs=17.5
Q ss_pred CcEEEEecCCEEEEEEEECCCCC
Q 009392 53 GPTLYAREHDTVLVKVVNHVKYN 75 (535)
Q Consensus 53 gP~i~~~~Gd~v~v~v~N~l~~~ 75 (535)
+-+|.++.||++.|.|.-+-..+
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPtTG 34 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPTTG 34 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCCCC
Confidence 34699999999999998654333
No 165
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=30.32 E-value=16 Score=30.29 Aligned_cols=24 Identities=25% Similarity=0.207 Sum_probs=19.2
Q ss_pred eeEEEeCCCEEEEEEEEcCCCceE
Q 009392 207 FTLPVDSGKTYMLRIINAALNEEL 230 (535)
Q Consensus 207 ~~~~v~~G~~~rlRliN~~~~~~~ 230 (535)
-.|+|+.||++||.+.|-+-.+.|
T Consensus 71 k~InV~~GETVrF~v~nkt~~W~F 94 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIVAWTF 94 (131)
T ss_dssp CEEEEETTCEEEEEETTEEEEEEE
T ss_pred eEEEecCCCEEEEEeCCcEEEEEE
Confidence 359999999999999988754444
No 166
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=28.27 E-value=58 Score=25.65 Aligned_cols=53 Identities=11% Similarity=0.091 Sum_probs=34.2
Q ss_pred CEEEEEEEECCCCC---ceEEeCCcccCCCCCCCCCCCcccCcCCCCCeEEEEEEe-CCCCcc
Q 009392 62 DTVLVKVVNHVKYN---VTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTI-TGQRGT 120 (535)
Q Consensus 62 d~v~v~v~N~l~~~---t~iH~HG~~~~~~~~~DGvp~~tq~~i~PG~~~~Y~~~~-~~~~Gt 120 (535)
=.+.|.++|-|+.+ ..++..|.=. .++ --+....|.||++.++++.. +..+|.
T Consensus 22 l~v~vsf~NPL~~~L~~c~~~vEG~GL-----~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 22 CEVQIVFKNPLPVTLTNVVFRLEGSGL-----QRP-KILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEEECCSSSCBCSEEEEEEETTT-----EEE-EEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEEECCCCCcccCEEEEEECCCC-----Ccc-eEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 35788999999764 4456555221 111 01122459999999999998 566775
No 167
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=26.76 E-value=1.2e+02 Score=23.70 Aligned_cols=60 Identities=18% Similarity=0.115 Sum_probs=39.5
Q ss_pred EEEEecC-CEEEEEEEECCCCCceE--EeCCcccCCCCCCC-----C----CCCcccCcCCCCCeEEEEEEe
Q 009392 55 TLYAREH-DTVLVKVVNHVKYNVTI--HWHGVRQLRTGWAD-----G----PAYITQCPIQSGHSYVYNFTI 114 (535)
Q Consensus 55 ~i~~~~G-d~v~v~v~N~l~~~t~i--H~HG~~~~~~~~~D-----G----vp~~tq~~i~PG~~~~Y~~~~ 114 (535)
.|++++| +++.++|.|.-+++.-+ |+|=......-..| | .|.-|.....||++.+.+.-.
T Consensus 12 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV~ 83 (101)
T 4ep8_B 12 QIALNTGRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELVA 83 (101)
T ss_dssp EEECSTTCCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred cEEEcCCCCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEEE
Confidence 5888888 78999999999988665 55544433221122 1 333344567888888887753
No 168
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=26.28 E-value=94 Score=25.52 Aligned_cols=50 Identities=10% Similarity=0.176 Sum_probs=31.0
Q ss_pred EEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccc----eeEeceEEeCCCceEEEE
Q 009392 216 TYMLRIINAALNEELFFKIAGHKLTVVEVDATYVK----PFKTDNIVIAPGQTTNVL 268 (535)
Q Consensus 216 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~l~l~pGeR~dv~ 268 (535)
.|++||-|.|... +.|-...+.+...||..-+ -+....=.|.|||.+...
T Consensus 31 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Yt 84 (126)
T 1xvs_A 31 AYLITIKNLSSQT---VQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYS 84 (126)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEE
T ss_pred EEEEEEEECCCCC---EEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEe
Confidence 4789999998654 3455555666666665321 122334478999877663
No 169
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=25.06 E-value=1.1e+02 Score=25.17 Aligned_cols=50 Identities=14% Similarity=0.237 Sum_probs=29.7
Q ss_pred EEEEEEEEcCCCceEEEEEcCceeEEEEeCCccc----ceeEeceEEeCCCceEEEE
Q 009392 216 TYMLRIINAALNEELFFKIAGHKLTVVEVDATYV----KPFKTDNIVIAPGQTTNVL 268 (535)
Q Consensus 216 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v----~P~~~d~l~l~pGeR~dv~ 268 (535)
.|++||-|.|... +.|-...+.+...||..- +-+....=.|.|||.+...
T Consensus 32 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Yt 85 (127)
T 2f1e_A 32 AYSIRIQNAGAVP---ARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYT 85 (127)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEE
T ss_pred EEEEEEEeCCCCC---EEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEe
Confidence 4789999998654 344445555555555432 1122234478999877663
No 170
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=24.11 E-value=1.4e+02 Score=27.13 Aligned_cols=74 Identities=11% Similarity=-0.006 Sum_probs=49.1
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEeCCcccCCCC-CCCCCCCcccCcCCCCCeEEEEEEeCCCCcceeEecCh-hhhh
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTG-WADGPAYITQCPIQSGHSYVYNFTITGQRGTLLWHAHI-LWLR 131 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~HG~~~~~~~-~~DGvp~~tq~~i~PG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~ 131 (535)
..+.+..|..|++.++... .- |+..++.-+ .+|. -||..-+..|.+ +++|+|+..|.. .|..
T Consensus 140 n~lvlP~~~~Vr~~vtS~D-Vi-----Hsf~vP~lg~K~Da---------iPGr~n~~~~~~-~~~G~y~g~Cse~CG~~ 203 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED-VL-----HSWAVPSLGLKTDA---------IPGRLNQTTLMS-SRPGLYYGQCSEICGSN 203 (227)
T ss_dssp SCEEEETTSCEEEEEEESS-SC-----EEEEEGGGTEEEEE---------CTTCCEEEEECC-SSCEEEEECCCSCCSTT
T ss_pred ceEEEecCCEEEEEEEeCc-cc-----ceeeecccCcEEEe---------cCCceEEEEEec-CCcEEEEEEehhhcccc
Confidence 6899999999999999863 22 333332210 0333 457777888887 899999999863 2222
Q ss_pred -cccEEEEEEeCC
Q 009392 132 -ATVHGAIVILPK 143 (535)
Q Consensus 132 -~Gl~G~iiV~~~ 143 (535)
+-|.+.+.|.++
T Consensus 204 Hs~M~~~v~vv~~ 216 (227)
T 1v54_B 204 HSFMPIVLELVPL 216 (227)
T ss_dssp GGGCCEEEEEECH
T ss_pred cccCeEEEEEEcH
Confidence 566666666543
No 171
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=24.05 E-value=99 Score=25.69 Aligned_cols=50 Identities=14% Similarity=0.238 Sum_probs=30.8
Q ss_pred EEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccc----eeEeceEEeCCCceEEEE
Q 009392 216 TYMLRIINAALNEELFFKIAGHKLTVVEVDATYVK----PFKTDNIVIAPGQTTNVL 268 (535)
Q Consensus 216 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~l~l~pGeR~dv~ 268 (535)
.|++||-|.|... +.|-...+.+...||..-+ -+....=.|.|||.+...
T Consensus 31 aY~ItI~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~Yt 84 (134)
T 1tza_A 31 SYTITIINLGEQA---AKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYT 84 (134)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEE
T ss_pred EEEEEEEeCCCCC---EEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEc
Confidence 4789999998654 3444455666666665321 122334478999877663
No 172
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=23.67 E-value=28 Score=25.43 Aligned_cols=25 Identities=8% Similarity=0.133 Sum_probs=21.1
Q ss_pred eeEEEECCCC-CCcEEEEecCCEEEE
Q 009392 42 KPIVTVNRKF-PGPTLYAREHDTVLV 66 (535)
Q Consensus 42 ~~~~~~NG~~-pgP~i~~~~Gd~v~v 66 (535)
.-.+.+||++ +++.-.++.||+|.|
T Consensus 42 ~~~vavN~~~v~~~~~~l~~gDeV~i 67 (74)
T 3rpf_C 42 VCAIALNDHLIDNLNTPLKDGDVISL 67 (74)
T ss_dssp TCEEEESSSEECCTTCCCCTTCEEEE
T ss_pred ccEEEECCEEcCCCCcCCCCCCEEEE
Confidence 3568999999 888888999999876
No 173
>1gui_A Laminarinase 16A; carbohydrate binding module, CBM, glucan, cellulose; HET: BGC; 1.9A {Thermotoga maritima} SCOP: b.18.1.14
Probab=23.32 E-value=3.1e+02 Score=22.55 Aligned_cols=18 Identities=28% Similarity=0.357 Sum_probs=13.0
Q ss_pred eEEEeCCCEEEEEEEEcC
Q 009392 208 TLPVDSGKTYMLRIINAA 225 (535)
Q Consensus 208 ~~~v~~G~~~rlRliN~~ 225 (535)
.+.+++|++|+|.+--.+
T Consensus 66 ~i~l~~G~~Y~lsf~aka 83 (155)
T 1gui_A 66 WIGLYRGKTYTISFKAKA 83 (155)
T ss_dssp EEECCTTCEEEEEEEEEE
T ss_pred cEEeCCCCEEEEEEEEEe
Confidence 467888888888775544
No 174
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=23.27 E-value=3.3e+02 Score=26.39 Aligned_cols=67 Identities=21% Similarity=0.242 Sum_probs=42.0
Q ss_pred EEEEEEEEcCCCceEEE-E---Ec---CceeEEEEeCCcccc----------eeEeceEEeCCCceEEEEEEeCC-----
Q 009392 216 TYMLRIINAALNEELFF-K---IA---GHKLTVVEVDATYVK----------PFKTDNIVIAPGQTTNVLLSADK----- 273 (535)
Q Consensus 216 ~~rlRliN~~~~~~~~~-~---i~---gh~~~via~DG~~v~----------P~~~d~l~l~pGeR~dv~v~~~~----- 273 (535)
++..-|-|.|... ++| . +| -..|.| ..||..++ |-..+-+.|+|||.+++.+++..
T Consensus 39 ~vk~tvtN~g~~~-~~lLk~~~lD~~~~~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydLs 116 (343)
T 2x3c_A 39 RVNLTLTNTGDKP-IRLLKWQLPGSDDAPLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDMS 116 (343)
T ss_dssp EEEEEEEECSSSC-EEEEGGGSCSSSCCCCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTCC
T ss_pred EEEEEEEeCCCCc-eEeeccCCCCcCccceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccccC
Confidence 4556666666443 222 1 12 223455 56776542 33357889999999999999875
Q ss_pred CCceeEEEeec
Q 009392 274 TSGKYLVAASP 284 (535)
Q Consensus 274 ~~g~y~i~~~~ 284 (535)
.+|+|.+++..
T Consensus 117 ~gG~y~v~~~g 127 (343)
T 2x3c_A 117 AQGQYSIRYQL 127 (343)
T ss_dssp SCEEEEEEEC-
T ss_pred CCceEEEEEee
Confidence 25899999864
No 175
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=23.25 E-value=25 Score=27.61 Aligned_cols=24 Identities=13% Similarity=0.012 Sum_probs=21.2
Q ss_pred eEEEECCCCCCcEEEEecCCEEEE
Q 009392 43 PIVTVNRKFPGPTLYAREHDTVLV 66 (535)
Q Consensus 43 ~~~~~NG~~pgP~i~~~~Gd~v~v 66 (535)
..+.+||+.-.+.-.++.||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 568999998778888999999987
No 176
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=22.71 E-value=1.4e+02 Score=27.03 Aligned_cols=64 Identities=17% Similarity=0.090 Sum_probs=32.7
Q ss_pred ceeEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccce-eEeceEEeCCCceEEEEEEeCC
Q 009392 206 GFTLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKP-FKTDNIVIAPGQTTNVLLSADK 273 (535)
Q Consensus 206 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P-~~~d~l~l~pGeR~dv~v~~~~ 273 (535)
+|.+++++|+...+||+..+.. +--|-.++.-+.++..+-++ .....+.|+.-.|+-+.++...
T Consensus 65 PPl~Rl~p~~~q~lRI~~~~~~----LP~DRESlf~lnv~eIPp~~~~~~n~lqia~r~rIKlFyRP~~ 129 (218)
T 4ay0_A 65 PPLFRLDAKQQNSLRIAQAGGV----FPRDKESLKWLCVKGIPPKDEDIWVDVQFAINNCIKLLVRPNE 129 (218)
T ss_dssp SSEEEECTTCEEEEEEEECSCC----CCSSSCEEEEEEEEEECC--------------CEEEEEEECTT
T ss_pred CCeEEeCCCCceEEEEEecCCC----CCcCcEEEEEEEEEecCCCCccccceeEEEEEEEEEEEEcCcc
Confidence 3899999999999999988742 11233333333333333211 1234577888888888777543
No 177
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=22.03 E-value=2.5e+02 Score=24.31 Aligned_cols=74 Identities=9% Similarity=0.086 Sum_probs=42.9
Q ss_pred eEEEeCCCEEEEEEEEcCCCceEEEEEcCceeEEEEeCCccccee----EeceE--E-eCCCceEEEEEEeC--CCCcee
Q 009392 208 TLPVDSGKTYMLRIINAALNEELFFKIAGHKLTVVEVDATYVKPF----KTDNI--V-IAPGQTTNVLLSAD--KTSGKY 278 (535)
Q Consensus 208 ~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~----~~d~l--~-l~pGeR~dv~v~~~--~~~g~y 278 (535)
.-.+..|+.+++|+-=......-.+.+ -|.+-..+|..+--. ....+ . +.+|+.+.+.+.++ =.+|+|
T Consensus 63 ~~~~~~Ge~v~l~i~~~~~~~i~~~v~---G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~~v~f~f~l~L~~G~Y 139 (188)
T 2r5o_A 63 PPSLTGNQQTDFLMKVVFEYDFDCVVP---GILIKTLDGLFLYGTNSFLASEGRENISVSRGDVRVFKFSLPVDLNSGDY 139 (188)
T ss_dssp CSSEETTCEEEEEEEEEESSCEEEEEE---EEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEEEEEEEEECCBCSEEE
T ss_pred eeEEeCCCEEEEEEEEEECCcCCccEE---EEEEECCCCCEEEecCcccccccccccccCCCCEEEEEEEEecccCCCeE
Confidence 334889999888875554333222322 255666677765211 11122 3 68899665555444 347999
Q ss_pred EEEeec
Q 009392 279 LVAASP 284 (535)
Q Consensus 279 ~i~~~~ 284 (535)
.|.+..
T Consensus 140 ~lsv~i 145 (188)
T 2r5o_A 140 LLSFGI 145 (188)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998763
No 178
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=21.91 E-value=92 Score=25.12 Aligned_cols=35 Identities=9% Similarity=-0.004 Sum_probs=26.3
Q ss_pred EEEEeCCCCcceeEecChhhhh-cccEEEE-EEeCCCC
Q 009392 110 YNFTITGQRGTLLWHAHILWLR-ATVHGAI-VILPKRG 145 (535)
Q Consensus 110 Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~i-iV~~~~~ 145 (535)
..+.+ ..+|++||-|-..+.= .||...| .|.....
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~~ 108 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGGA 108 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC---
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCCC
Confidence 56777 7899999999875543 8999999 8886654
No 179
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=21.14 E-value=1.1e+02 Score=25.62 Aligned_cols=50 Identities=16% Similarity=0.288 Sum_probs=29.1
Q ss_pred EEEEEEEEcCCCceEEEEEcCceeEEEEeCCcccc----eeEeceEEeCCCceEEEE
Q 009392 216 TYMLRIINAALNEELFFKIAGHKLTVVEVDATYVK----PFKTDNIVIAPGQTTNVL 268 (535)
Q Consensus 216 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~l~l~pGeR~dv~ 268 (535)
.|++||-|.|... +.|-...+.+...||..-+ -+....=.|.|||.+...
T Consensus 36 aY~ItI~N~~~~~---vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~Yt 89 (139)
T 1xq4_A 36 AYTVRITNTGSHP---AQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYT 89 (139)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEE
T ss_pred EEEEEEEeCCCCC---EEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEc
Confidence 4789999998654 3444444555555554311 122334478898877653
No 180
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=20.78 E-value=89 Score=27.42 Aligned_cols=27 Identities=19% Similarity=0.324 Sum_probs=20.5
Q ss_pred cEEEEecCCEEEEEEEECCCCCceEEe
Q 009392 54 PTLYAREHDTVLVKVVNHVKYNVTIHW 80 (535)
Q Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~t~iH~ 80 (535)
..+.+.+|+.|.+.-.-.......+.|
T Consensus 32 ~~~~v~~G~~v~L~C~~~~~~~~~v~W 58 (237)
T 3sob_L 32 SSLSASVGDRVTITCRASQDVSTAVAW 58 (237)
T ss_dssp SEEEEETTCCEEEEEEESSCCTTCEEE
T ss_pred CeEEEeCCCcEEEEEecCCCCCceEEE
Confidence 468888999988888766555567777
Done!