BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009395
(535 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224107106|ref|XP_002314377.1| predicted protein [Populus trichocarpa]
gi|222863417|gb|EEF00548.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/503 (85%), Positives = 475/503 (94%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKPVKGEEAH+LGLVDAVV+PN+LVSTARQWALDILE RRPW+A+LYKT+K++ LG
Sbjct: 167 MMLTSKPVKGEEAHALGLVDAVVSPNELVSTARQWALDILERRRPWIASLYKTEKLDSLG 226
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREIFKFAR Q RK+APNLTHPIVCIDV+E G+VSGPR GL KE E F +L+RS+TCKS
Sbjct: 227 EAREIFKFAREQVRKRAPNLTHPIVCIDVIEHGIVSGPRDGLYKELESFHELVRSDTCKS 286
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+HIFFAQRGT+KVPG+TDLGL PRRVKKVA+LGGGLMGSGIATAL+LSNYPVILKEVN
Sbjct: 287 LIHIFFAQRGTTKVPGITDLGLVPRRVKKVAVLGGGLMGSGIATALVLSNYPVILKEVNN 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+AGIGRVRANLQSRVKKG+MTQEKFEKT+SLL G LDYESFKDVDMVIEA+IENVSL
Sbjct: 347 QFLQAGIGRVRANLQSRVKKGRMTQEKFEKTMSLLKGALDYESFKDVDMVIEAVIENVSL 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEKYCPPHCILASNTSTIDLNLIG++T S+DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 407 KQQIFSDLEKYCPPHCILASNTSTIDLNLIGKQTKSQDRIIGAHFFSPAHVMPLLEIVRT 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
QTSPQVIVDLLD+GKKI+KTP+VVGNCTGFAVNRMFFPYTQAA LLVE G DLY ID+
Sbjct: 467 KQTSPQVIVDLLDVGKKIRKTPVVVGNCTGFAVNRMFFPYTQAALLLVEHGADLYQIDKV 526
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
ITKFGMPMGPFRL DLVGFGVAIATG QF+ NFPERTYKSM+IP+MQEDKRAGETTRKGF
Sbjct: 527 ITKFGMPMGPFRLVDLVGFGVAIATGTQFVVNFPERTYKSMLIPLMQEDKRAGETTRKGF 586
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD+RRKA PDPE++K+IEKAR++SGVA DPK AKL EKDIVEMIFFPVVNEACRVFAE
Sbjct: 587 YLYDDRRKAKPDPELRKYIEKARNISGVANDPKLAKLPEKDIVEMIFFPVVNEACRVFAE 646
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDI+S+MGMGFPPYR
Sbjct: 647 GIAVKAADLDISSLMGMGFPPYR 669
>gi|225431755|ref|XP_002270067.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a [Vitis vinifera]
Length = 724
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/503 (86%), Positives = 470/503 (93%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SKPVKG +AHSLGLVDAVVAP+QLV TARQWALDILE RRPWV +LYKTDK+EPLG
Sbjct: 165 MMLMSKPVKGVDAHSLGLVDAVVAPDQLVKTARQWALDILECRRPWVHSLYKTDKLEPLG 224
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFAR QA+KQAPNL HP++CIDV+EAG+VSGP AGL KEAE FQ+LL S+ CKS
Sbjct: 225 EAREILKFARTQAQKQAPNLKHPLLCIDVIEAGIVSGPVAGLWKEAEAFQELLHSDICKS 284
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVHIFFAQRGTSKVPG+ DLGL PRR+ KVAILGGGLMGSGIATAL+LSNYPVILKEVNE
Sbjct: 285 LVHIFFAQRGTSKVPGIADLGLVPRRINKVAILGGGLMGSGIATALMLSNYPVILKEVNE 344
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AGIGRVRANLQSRVKKG MTQEKFEKT SLL GVLDYESFKDVDMVIEA+IENVSL
Sbjct: 345 KFLQAGIGRVRANLQSRVKKGAMTQEKFEKTFSLLKGVLDYESFKDVDMVIEAVIENVSL 404
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIFADLEK+CPPHCILASNTSTIDLNLIGE+T S DRIVGAHFFSPAHVMPLLEIVRT
Sbjct: 405 KQQIFADLEKFCPPHCILASNTSTIDLNLIGEKTRSHDRIVGAHFFSPAHVMPLLEIVRT 464
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQVIVDLLDIGKKIKKTP+VVGNCTGFAVNRMF PYTQAA LLVE G D+Y IDRA
Sbjct: 465 QRTSPQVIVDLLDIGKKIKKTPVVVGNCTGFAVNRMFSPYTQAALLLVEHGADVYQIDRA 524
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
ITKFGMPMGPFRL DLVGFGVAIATG QF++NFPERTYKSM+IPIMQEDKRAGETTRKGF
Sbjct: 525 ITKFGMPMGPFRLVDLVGFGVAIATGGQFVQNFPERTYKSMLIPIMQEDKRAGETTRKGF 584
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+YD++RKASPDPE+KK++EKAR +SGVAIDPK KLS+KDIVEMIFFPVVNEACRV+AE
Sbjct: 585 YVYDDKRKASPDPELKKYVEKARGISGVAIDPKLMKLSDKDIVEMIFFPVVNEACRVYAE 644
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDIA VMGMGFPPYR
Sbjct: 645 GIAVKAADLDIAGVMGMGFPPYR 667
>gi|296083347|emb|CBI22983.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/503 (86%), Positives = 470/503 (93%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SKPVKG +AHSLGLVDAVVAP+QLV TARQWALDILE RRPWV +LYKTDK+EPLG
Sbjct: 206 MMLMSKPVKGVDAHSLGLVDAVVAPDQLVKTARQWALDILECRRPWVHSLYKTDKLEPLG 265
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFAR QA+KQAPNL HP++CIDV+EAG+VSGP AGL KEAE FQ+LL S+ CKS
Sbjct: 266 EAREILKFARTQAQKQAPNLKHPLLCIDVIEAGIVSGPVAGLWKEAEAFQELLHSDICKS 325
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVHIFFAQRGTSKVPG+ DLGL PRR+ KVAILGGGLMGSGIATAL+LSNYPVILKEVNE
Sbjct: 326 LVHIFFAQRGTSKVPGIADLGLVPRRINKVAILGGGLMGSGIATALMLSNYPVILKEVNE 385
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AGIGRVRANLQSRVKKG MTQEKFEKT SLL GVLDYESFKDVDMVIEA+IENVSL
Sbjct: 386 KFLQAGIGRVRANLQSRVKKGAMTQEKFEKTFSLLKGVLDYESFKDVDMVIEAVIENVSL 445
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIFADLEK+CPPHCILASNTSTIDLNLIGE+T S DRIVGAHFFSPAHVMPLLEIVRT
Sbjct: 446 KQQIFADLEKFCPPHCILASNTSTIDLNLIGEKTRSHDRIVGAHFFSPAHVMPLLEIVRT 505
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQVIVDLLDIGKKIKKTP+VVGNCTGFAVNRMF PYTQAA LLVE G D+Y IDRA
Sbjct: 506 QRTSPQVIVDLLDIGKKIKKTPVVVGNCTGFAVNRMFSPYTQAALLLVEHGADVYQIDRA 565
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
ITKFGMPMGPFRL DLVGFGVAIATG QF++NFPERTYKSM+IPIMQEDKRAGETTRKGF
Sbjct: 566 ITKFGMPMGPFRLVDLVGFGVAIATGGQFVQNFPERTYKSMLIPIMQEDKRAGETTRKGF 625
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+YD++RKASPDPE+KK++EKAR +SGVAIDPK KLS+KDIVEMIFFPVVNEACRV+AE
Sbjct: 626 YVYDDKRKASPDPELKKYVEKARGISGVAIDPKLMKLSDKDIVEMIFFPVVNEACRVYAE 685
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDIA VMGMGFPPYR
Sbjct: 686 GIAVKAADLDIAGVMGMGFPPYR 708
>gi|224130412|ref|XP_002328602.1| predicted protein [Populus trichocarpa]
gi|222838584|gb|EEE76949.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/503 (85%), Positives = 473/503 (94%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKPVKGEEAH+LGLVDAVV+PN+LVSTARQWALDI E RRPW+A+LYKT+K++ LG
Sbjct: 167 MMLTSKPVKGEEAHALGLVDAVVSPNELVSTARQWALDIFECRRPWIASLYKTEKLDSLG 226
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREIFKFARAQA+K+APNL HPIVCI+VVE G+VSGPRAGL KE E FQ+L+RS+ KS
Sbjct: 227 EAREIFKFARAQAQKRAPNLLHPIVCINVVEHGIVSGPRAGLYKEFESFQELVRSDISKS 286
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVHIFFA GT+KVPG+TDLG PR VKKVA+LGGGLMGSGIATALILSNYPVILKEVN+
Sbjct: 287 LVHIFFALHGTTKVPGITDLGFVPRLVKKVAVLGGGLMGSGIATALILSNYPVILKEVND 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+AGIGRVRANLQSRVKKGKMTQEKFEKT+SLL G LDYESFKDVDMVIEA+IENVSL
Sbjct: 347 QFLQAGIGRVRANLQSRVKKGKMTQEKFEKTMSLLKGSLDYESFKDVDMVIEAVIENVSL 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEKYCPPHCILASNTSTIDLNLIG++T S+DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 407 KQQIFSDLEKYCPPHCILASNTSTIDLNLIGKQTKSQDRIIGAHFFSPAHVMPLLEIVRT 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
QTSPQVIVDLLD+GKKI+KTP+VVGNCTGFAVNRMFFPYTQAA LVE G DLY IDR
Sbjct: 467 KQTSPQVIVDLLDVGKKIRKTPVVVGNCTGFAVNRMFFPYTQAAIFLVEHGVDLYQIDRV 526
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+KFGMPMGPFRLADLVGFGVAIATGMQF+ENFPERTYKSM++P+MQEDKR GETT KGF
Sbjct: 527 ISKFGMPMGPFRLADLVGFGVAIATGMQFVENFPERTYKSMLLPLMQEDKRGGETTCKGF 586
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD+RRKA PDPE++K+IEKARS+SGVA+DPK AKL EKDIVEMIFFPVVNEACRVFAE
Sbjct: 587 YLYDDRRKAKPDPELRKYIEKARSISGVAVDPKLAKLPEKDIVEMIFFPVVNEACRVFAE 646
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDIAS+MGMGFPPYR
Sbjct: 647 GIAVKAADLDIASLMGMGFPPYR 669
>gi|356521845|ref|XP_003529561.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like [Glycine max]
Length = 724
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/503 (83%), Positives = 473/503 (94%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L SKPVKG+EA SLGLVD +V+PN LV+TARQWALD+L HRRPW+A+LYKT+K+EPLG
Sbjct: 164 MILASKPVKGKEAFSLGLVDGLVSPNDLVNTARQWALDMLGHRRPWIASLYKTEKLEPLG 223
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQARK+APNL HP+VCIDV+EAG+V+GPRAGL KEAE F+ L+RS+TCKS
Sbjct: 224 EAREILKFARAQARKRAPNLQHPLVCIDVIEAGIVAGPRAGLWKEAEAFEGLVRSDTCKS 283
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FFAQRGTSKVPGVTD GLAPR+VKKVAI+GGGLMGSGIATALILSNYPVILKEVNE
Sbjct: 284 LVHVFFAQRGTSKVPGVTDCGLAPRQVKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 343
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AGI R++ANLQSRVKKGK+T+E FEKTISLL G LDYESF+DVD+VIEA+IEN+SL
Sbjct: 344 KFLDAGINRIKANLQSRVKKGKLTKENFEKTISLLKGSLDYESFRDVDLVIEAVIENISL 403
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEKYCPPHCILASNTSTIDLNLIGE+T S+DRIVGAHFFSPAHVMPLLEIVRT
Sbjct: 404 KQQIFSDLEKYCPPHCILASNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRT 463
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
QTSPQVIVD+LDI KKIKKTP+VVGNCTGFAVNRMFFPYTQA LLVERG D+Y IDR
Sbjct: 464 KQTSPQVIVDVLDISKKIKKTPVVVGNCTGFAVNRMFFPYTQAGLLLVERGADVYQIDRI 523
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
ITKFGMPMGPFRLADLVGFGVAIATG QFI+NFPERTYKSM+IP++QED RAGETTRKGF
Sbjct: 524 ITKFGMPMGPFRLADLVGFGVAIATGTQFIQNFPERTYKSMLIPLLQEDNRAGETTRKGF 583
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD++RKASPDPE+K +IEKARS+SGV++DPK AKL EKDI+EMIFFPVVNEACRV E
Sbjct: 584 YLYDDKRKASPDPELKNYIEKARSISGVSVDPKLAKLQEKDIIEMIFFPVVNEACRVLDE 643
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDI+++MGMGFPPYR
Sbjct: 644 GIAVKAADLDISAIMGMGFPPYR 666
>gi|351723429|ref|NP_001234975.1| peroxisomal fatty acid beta-oxidation multifunctional protein
[Glycine max]
gi|167962162|dbj|BAG09370.1| peroxisomal fatty acid beta-oxidation multifunctional protein
[Glycine max]
Length = 723
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/503 (83%), Positives = 471/503 (93%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L SKPVKG+EA SLGLVD +V+PN LV+TARQWALD+L HRRPW+A+LYKT+K+EPLG
Sbjct: 164 MILASKPVKGKEAFSLGLVDGLVSPNDLVNTARQWALDMLGHRRPWIASLYKTEKLEPLG 223
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQARK+APNL HP+VCIDV+EAG+V+GPRAGL KEAE F+ L+RS+TCKS
Sbjct: 224 EAREILKFARAQARKRAPNLQHPLVCIDVIEAGIVAGPRAGLWKEAEAFEGLVRSDTCKS 283
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FFAQRGTSKVPGVTD GLAPR+VKKVAI+GGGLMGSGIATALILSNYPVILKEVNE
Sbjct: 284 LVHVFFAQRGTSKVPGVTDCGLAPRQVKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 343
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AGI R++ANLQSRVKKGK+T+E FEKTISLL G LDYESF+DVDMVIEA+IEN+SL
Sbjct: 344 KFLDAGINRIKANLQSRVKKGKLTKENFEKTISLLKGSLDYESFRDVDMVIEAVIENISL 403
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEKYCPPHCILASNTSTIDLNLIGE+T ++DRIVGAHFFSPAHVMPLLEIVRT
Sbjct: 404 KQQIFSDLEKYCPPHCILASNTSTIDLNLIGEKTKTQDRIVGAHFFSPAHVMPLLEIVRT 463
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
QTS QVIVD+LDI KKIKKTP+VVGNCTGFAVNRMFFPYTQA LLVERG D+Y IDR
Sbjct: 464 KQTSAQVIVDVLDISKKIKKTPVVVGNCTGFAVNRMFFPYTQAGLLLVERGADVYQIDRV 523
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
ITKFGMPMGPFRL DLVGFGVAIATGMQFI+NFPERTYKSM+I ++QEDKRAGETT KGF
Sbjct: 524 ITKFGMPMGPFRLMDLVGFGVAIATGMQFIQNFPERTYKSMLISLLQEDKRAGETTHKGF 583
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLY+++RKASPDPE+K +IEKARS+SGV++DPK AKL EKDI+EMIFFPVVNEACRV E
Sbjct: 584 YLYNDKRKASPDPELKNYIEKARSISGVSVDPKLAKLQEKDIIEMIFFPVVNEACRVLDE 643
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDI+++MGMGFPPYR
Sbjct: 644 GIAVKAADLDISAIMGMGFPPYR 666
>gi|357478819|ref|XP_003609695.1| Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Medicago truncatula]
gi|355510750|gb|AES91892.1| Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Medicago truncatula]
Length = 724
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/504 (82%), Positives = 464/504 (92%), Gaps = 1/504 (0%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKPVKG++A S GLVD +V+P+QLV+TARQWALDIL+ RRPW+A+LYKT+KIEPLG
Sbjct: 164 MMLTSKPVKGKDAFSSGLVDGLVSPDQLVNTARQWALDILDRRRPWIASLYKTEKIEPLG 223
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQARKQAPNL HP+VCIDV+EAG+VSGPRAGL KEAE F L++S+TCKS
Sbjct: 224 EAREILKFARAQARKQAPNLKHPLVCIDVIEAGIVSGPRAGLWKEAEAFDALVQSDTCKS 283
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+HIFFAQRGTSKVPGVTD GL PR VKKVAILGGGLMGSGIATALILSNY VILKEVNE
Sbjct: 284 LIHIFFAQRGTSKVPGVTDRGLVPRPVKKVAILGGGLMGSGIATALILSNYSVILKEVNE 343
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AGI R++ANLQSRVKKG +TQE+FEK SL+ G LDY+SF+DVDMVIEA+IENVSL
Sbjct: 344 KFLDAGINRIKANLQSRVKKGNLTQERFEKAFSLVKGSLDYDSFRDVDMVIEAVIENVSL 403
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFF-SPAHVMPLLEIVR 299
KQQIFADLEKYCPPHCIL SNTSTIDL+LIGE+T S+DRI+GAHFF PAHVMPLLEIVR
Sbjct: 404 KQQIFADLEKYCPPHCILGSNTSTIDLDLIGEKTKSQDRIIGAHFFRCPAHVMPLLEIVR 463
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
T +TSPQVIVDLLDI KKIKKTP+VVGNCTGFAVNR+FFPYTQA LLVERG D+Y ID+
Sbjct: 464 TKRTSPQVIVDLLDISKKIKKTPVVVGNCTGFAVNRVFFPYTQATLLLVERGADVYQIDK 523
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
A+TKFGMPMGP RL DLVGFGVA+ATG QF++NFPERTYKSM+IP++QEDKRAGETTRKG
Sbjct: 524 AVTKFGMPMGPLRLCDLVGFGVAVATGSQFVQNFPERTYKSMLIPLLQEDKRAGETTRKG 583
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
FYLYD+RRKASPDPE+KKFIEKARS+SGV++DP KL EKDI+EMIFFPVVNEACRV
Sbjct: 584 FYLYDDRRKASPDPELKKFIEKARSISGVSVDPMLVKLQEKDIIEMIFFPVVNEACRVLD 643
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGI VKAADLDIA++MGMGFPPYR
Sbjct: 644 EGIVVKAADLDIAAIMGMGFPPYR 667
>gi|171854673|dbj|BAG16526.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
protein [Capsicum chinense]
Length = 725
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/503 (82%), Positives = 464/503 (92%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LTSKPVKGEEA +LGLVDAVV NQL+ TAR+WALDILE R+PWVA+L+KTDKIEPLG
Sbjct: 166 MILTSKPVKGEEAVNLGLVDAVVPSNQLLGTARKWALDILECRKPWVASLHKTDKIEPLG 225
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREIFKFAR Q RKQAPNL H +V IDV+E G+VSGP AGL KEAE FQ LL S+TCK+
Sbjct: 226 EAREIFKFARVQTRKQAPNLQHLLVVIDVIEEGIVSGPLAGLWKEAEAFQALLHSDTCKA 285
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LV++FFAQR T+KVPGVTDLGL PRR+KKVAILGGGLMGSGIATAL+ S YPVILKEVN+
Sbjct: 286 LVNVFFAQRATTKVPGVTDLGLKPRRIKKVAILGGGLMGSGIATALLRSGYPVILKEVND 345
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AG+GRV+ANLQS VKKGKM+QEKFEKT+SLL G LDYE F+DVDMVIEA+IENVSL
Sbjct: 346 KFLQAGLGRVKANLQSSVKKGKMSQEKFEKTLSLLKGALDYEGFRDVDMVIEAVIENVSL 405
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQ+FADLEKYCP HCILASNTSTIDLNLIGE+T S+DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 406 KQQVFADLEKYCPSHCILASNTSTIDLNLIGEKTKSQDRIIGAHFFSPAHVMPLLEIVRT 465
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQ+IVDLLD+GKKIKKTP+VVGNCTGFAVNRMFFPYTQAA LLVERG D++ IDR
Sbjct: 466 QKTSPQIIVDLLDVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAALLLVERGADVFRIDRI 525
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
ITKFGMPMGPFRL DLVGFGVAIATG QF+ NFPERTYKSM+IP+MQEDKRAGETTRKGF
Sbjct: 526 ITKFGMPMGPFRLCDLVGFGVAIATGGQFVMNFPERTYKSMLIPLMQEDKRAGETTRKGF 585
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+YD+RRKASPDPE+KK+IEKAR MSGV ID K AKLS+KDI+EMIFFPVVNEACRV AE
Sbjct: 586 YVYDDRRKASPDPEIKKYIEKAREMSGVTIDHKMAKLSDKDIIEMIFFPVVNEACRVLAE 645
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVK++DLDI+++MGMGFPPYR
Sbjct: 646 GIAVKSSDLDISAIMGMGFPPYR 668
>gi|356564184|ref|XP_003550336.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein MFP2-like [Glycine max]
Length = 722
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/503 (80%), Positives = 457/503 (90%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKPVKG+EA SLGLVD +++P+ LV+TA QWALDI+ RRPW+A+LYKTDK+EPLG
Sbjct: 163 MMLTSKPVKGKEAFSLGLVDGLMSPDDLVNTACQWALDIMGRRRPWIASLYKTDKLEPLG 222
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQ +K+APNL HP+VCIDV+EAGVV+GPRAGL KE E + L++S+T KS
Sbjct: 223 EAREILKFARAQVQKRAPNLQHPLVCIDVIEAGVVAGPRAGLWKEVEASEGLIKSDTSKS 282
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FF+QRGTSKVPGVTD GL PR VKKVAI+GGGLMGSGIATALILS+YP+ILKEVNE
Sbjct: 283 LIHVFFSQRGTSKVPGVTDCGLVPRHVKKVAIIGGGLMGSGIATALILSSYPIILKEVNE 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFLEAGI R++ANLQSRVKKGK+TQE FE T+SLL G LDYESFKDVDMVIEA++ENVSL
Sbjct: 343 KFLEAGINRIKANLQSRVKKGKLTQENFENTVSLLKGTLDYESFKDVDMVIEAVVENVSL 402
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIFADLEKYCPPHCILASNTSTIDLNLIGERT S+DRIVGAHFFSPAHVMPLLEIVRT
Sbjct: 403 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTKSQDRIVGAHFFSPAHVMPLLEIVRT 462
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
QTS QV+VD+LDI KKIKKTP+VVGNCTGFAVNRMFFPYTQA LVE G D+Y IDR
Sbjct: 463 KQTSAQVVVDVLDISKKIKKTPVVVGNCTGFAVNRMFFPYTQAGLFLVEHGADVYQIDRV 522
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
ITKFGMPMGPFRL DLVGFGVAIATGMQFI+NFPERTYKSM+IP++QEDKRAGETTRKGF
Sbjct: 523 ITKFGMPMGPFRLVDLVGFGVAIATGMQFIQNFPERTYKSMLIPLLQEDKRAGETTRKGF 582
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD++ K SPDPE+K +IEKARS +GV++DPK KL EKDI+EM FFPVVNEACRV E
Sbjct: 583 YLYDDKCKPSPDPELKNYIEKARSFTGVSVDPKLVKLQEKDIIEMTFFPVVNEACRVLDE 642
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVK +DLDI++VMGMGFPPYR
Sbjct: 643 GIAVKGSDLDISAVMGMGFPPYR 665
>gi|297829230|ref|XP_002882497.1| hypothetical protein ARALYDRAFT_478006 [Arabidopsis lyrata subsp.
lyrata]
gi|297328337|gb|EFH58756.1| hypothetical protein ARALYDRAFT_478006 [Arabidopsis lyrata subsp.
lyrata]
Length = 723
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/503 (80%), Positives = 459/503 (91%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LTSKPVK EE HSLGL+DAV+ P +L++TAR+WALDI+E R+PWV+++ KTDK+ LG
Sbjct: 164 MILTSKPVKAEEGHSLGLIDAVMPPAELLTTARRWALDIVERRKPWVSSVSKTDKLPSLG 223
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFAR Q +K+APN+ HP++C+D +E G+VSGPRAGL+KEAE ++++ +T KS
Sbjct: 224 EAREILKFARGQTQKRAPNMKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKS 283
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FF+QRGT+KVPGVTD GLAPR++KKVAI+GGGLMGSGIATALILSNYPVILKEVNE
Sbjct: 284 LIHVFFSQRGTAKVPGVTDRGLAPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 343
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFLEAGIGRV+ANLQSRV+KG M+QEKFEKT+SLL G LDYESF+DVDMVIEA+IEN+SL
Sbjct: 344 KFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISL 403
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIFADLEKYCP HCILASNTSTIDLN IGERT S+DRIVGAHFFSPAH+MPLLEIVRT
Sbjct: 404 KQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRT 463
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
N TS QVIVDLLD+GKKIKKTP+VVGNCTGFAVNRMFFPYTQAA LVE G D YLIDRA
Sbjct: 464 NHTSAQVIVDLLDVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRA 523
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+KFGMPMGPFRL DLVGFGVAIAT QFIENF ERTYKSMIIP+MQEDKRAGE TRKGF
Sbjct: 524 ISKFGMPMGPFRLCDLVGFGVAIATATQFIENFSERTYKSMIIPLMQEDKRAGEATRKGF 583
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD++RKA PDPE+KK+IEKARS+SGV +DPK A LSEK+I+EM FFPVVNEACRVFAE
Sbjct: 584 YLYDDKRKAKPDPELKKYIEKARSISGVKLDPKLANLSEKEIIEMTFFPVVNEACRVFAE 643
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDIA +MGMGFPPYR
Sbjct: 644 GIAVKAADLDIAGIMGMGFPPYR 666
>gi|15231317|ref|NP_187342.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
thaliana]
gi|75267758|sp|Q9ZPI5.1|MFP2_ARATH RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional
protein MFP2; Short=AtMPF2; Includes: RecName:
Full=Enoyl-CoA hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|295982056|pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2
gi|6728993|gb|AAF26990.1|AC016827_1 fatty acid multifunctional protein (AtMFP2) [Arabidopsis thaliana]
gi|4337027|gb|AAD18042.1| MFP2 [Arabidopsis thaliana]
gi|17065090|gb|AAL32699.1| fatty acid multifunctional protein (AtMFP2) [Arabidopsis thaliana]
gi|332640947|gb|AEE74468.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
thaliana]
Length = 725
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/503 (80%), Positives = 456/503 (90%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LTSKPVK EE HSLGL+DAVV P +LV+TAR+WALDI+ R+PWV+++ KTDK+ PLG
Sbjct: 166 MILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLG 225
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI FA+AQ K+APN+ HP++C+D +E G+VSGPRAGL+KEAE ++++ +T K
Sbjct: 226 EAREILTFAKAQTLKRAPNMKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKG 285
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FF+QRGT+KVPGVTD GL PR++KKVAI+GGGLMGSGIATALILSNYPVILKEVNE
Sbjct: 286 LIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFLEAGIGRV+ANLQSRV+KG M+QEKFEKT+SLL G LDYESF+DVDMVIEA+IEN+SL
Sbjct: 346 KFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISL 405
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIFADLEKYCP HCILASNTSTIDLN IGERT S+DRIVGAHFFSPAH+MPLLEIVRT
Sbjct: 406 KQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRT 465
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
N TS QVIVDLLD+GKKIKKTP+VVGNCTGFAVNRMFFPYTQAA LVE G D YLIDRA
Sbjct: 466 NHTSAQVIVDLLDVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRA 525
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+KFGMPMGPFRL DLVGFGVAIAT QFIENF ERTYKSMIIP+MQEDKRAGE TRKGF
Sbjct: 526 ISKFGMPMGPFRLCDLVGFGVAIATATQFIENFSERTYKSMIIPLMQEDKRAGEATRKGF 585
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD++RKA PDPE+KK+IEKARS+SGV +DPK A LSEKDI+EM FFPVVNEACRVFAE
Sbjct: 586 YLYDDKRKAKPDPELKKYIEKARSISGVKLDPKLANLSEKDIIEMTFFPVVNEACRVFAE 645
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDIA +MGMGFPPYR
Sbjct: 646 GIAVKAADLDIAGIMGMGFPPYR 668
>gi|449522793|ref|XP_004168410.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like isoform 1 [Cucumis sativus]
Length = 794
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/503 (79%), Positives = 451/503 (89%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKP+KG+EAHSLGLVDA+V P +L++TAR+WAL+ILE RRPWV +L++TDK+E L
Sbjct: 166 MMLTSKPIKGQEAHSLGLVDAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLA 225
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR+IF ARAQA+KQ PNL H I CID VE GVVSGPRAGL KEAE+FQ LL S+TCKS
Sbjct: 226 EARKIFNLARAQAKKQYPNLKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKS 285
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+HIFFAQR T+KVPGVTDLGL PR++KKVAI+GGGLMGSGIATALILSNY V+LKEVN+
Sbjct: 286 LIHIFFAQRSTTKVPGVTDLGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVND 345
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AGI RVRANLQSRVKKG MT EKFEK+ISLL GVL+YESFKDVDMVIEA+IENVSL
Sbjct: 346 KFLQAGIDRVRANLQSRVKKGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSL 405
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEKYCPPHC+LA+NTSTIDL LIGER S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 406 KQQIFSDLEKYCPPHCMLATNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRT 465
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
T+ QVIVDLLD+GK IKKTP+VVGNCTGFAVNRMFFPY+QAA LL E G D Y IDRA
Sbjct: 466 KHTAAQVIVDLLDVGKNIKKTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRA 525
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+KFGMPMGPFRL DLVGFGVA AT QF++ FPERTYKSM+IP+MQEDK AGE+TRKGF
Sbjct: 526 ISKFGMPMGPFRLCDLVGFGVAAATASQFVQAFPERTYKSMLIPLMQEDKNAGESTRKGF 585
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+YD+ RKA P+PE+KK+IEKAR+ SGV++DPK KL EKDIVEMIFFPVVNEACRV AE
Sbjct: 586 YVYDKNRKAGPNPELKKYIEKARNSSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLAE 645
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDIA VMGMGFP YR
Sbjct: 646 GIAVKAADLDIAGVMGMGFPSYR 668
>gi|449522795|ref|XP_004168411.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like isoform 2 [Cucumis sativus]
gi|34922495|sp|Q39659.1|MFPA_CUCSA RecName: Full=Glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a; Includes: RecName: Full=Enoyl-CoA
hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|551428|emb|CAA55630.1| tetrafunctional protein [Cucumis sativus]
Length = 725
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/503 (79%), Positives = 451/503 (89%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKP+KG+EAHSLGLVDA+V P +L++TAR+WAL+ILE RRPWV +L++TDK+E L
Sbjct: 166 MMLTSKPIKGQEAHSLGLVDAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLA 225
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR+IF ARAQA+KQ PNL H I CID VE GVVSGPRAGL KEAE+FQ LL S+TCKS
Sbjct: 226 EARKIFNLARAQAKKQYPNLKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKS 285
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+HIFFAQR T+KVPGVTDLGL PR++KKVAI+GGGLMGSGIATALILSNY V+LKEVN+
Sbjct: 286 LIHIFFAQRSTTKVPGVTDLGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVND 345
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AGI RVRANLQSRVKKG MT EKFEK+ISLL GVL+YESFKDVDMVIEA+IENVSL
Sbjct: 346 KFLQAGIDRVRANLQSRVKKGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSL 405
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEKYCPPHC+LA+NTSTIDL LIGER S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 406 KQQIFSDLEKYCPPHCMLATNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRT 465
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
T+ QVIVDLLD+GK IKKTP+VVGNCTGFAVNRMFFPY+QAA LL E G D Y IDRA
Sbjct: 466 KHTAAQVIVDLLDVGKNIKKTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRA 525
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+KFGMPMGPFRL DLVGFGVA AT QF++ FPERTYKSM+IP+MQEDK AGE+TRKGF
Sbjct: 526 ISKFGMPMGPFRLCDLVGFGVAAATASQFVQAFPERTYKSMLIPLMQEDKNAGESTRKGF 585
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+YD+ RKA P+PE+KK+IEKAR+ SGV++DPK KL EKDIVEMIFFPVVNEACRV AE
Sbjct: 586 YVYDKNRKAGPNPELKKYIEKARNSSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLAE 645
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDIA VMGMGFP YR
Sbjct: 646 GIAVKAADLDIAGVMGMGFPSYR 668
>gi|551444|emb|CAA55910.1| protein MFP-b [Cucumis sativus]
Length = 633
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/503 (79%), Positives = 451/503 (89%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKP+KG+EAHSLGLVDA+V P +L++TAR+WAL+ILE RRPWV +L++TDK+E L
Sbjct: 74 MMLTSKPIKGQEAHSLGLVDAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLA 133
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR+IF ARAQA+KQ PNL H I CID VE GVVSGPRAGL KEAE+FQ LL S+TCKS
Sbjct: 134 EARKIFNLARAQAKKQYPNLKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKS 193
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+HIFFAQR T+KVPGVTDLGL PR++KKVAI+GGGLMGSGIATALILSNY V+LKEVN+
Sbjct: 194 LIHIFFAQRSTTKVPGVTDLGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVND 253
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AGI RVRANLQSRVKKG MT EKFEK+ISLL GVL+YESFKDVDMVIEA+IENVSL
Sbjct: 254 KFLQAGIDRVRANLQSRVKKGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSL 313
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEKYCPPHC+LA+NTSTIDL LIGER S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 314 KQQIFSDLEKYCPPHCMLATNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRT 373
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
T+ QVIVDLLD+GK IKKTP+VVGNCTGFAVNRMFFPY+QAA LL E G D Y IDRA
Sbjct: 374 KHTAAQVIVDLLDVGKNIKKTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRA 433
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+KFGMPMGPFRL DLVGFGVA AT QF++ FPERTYKSM+IP+MQEDK AGE+TRKGF
Sbjct: 434 ISKFGMPMGPFRLCDLVGFGVAAATASQFVQAFPERTYKSMLIPLMQEDKNAGESTRKGF 493
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+YD+ RKA P+PE+KK+IEKAR+ SGV++DPK KL EKDIVEMIFFPVVNEACRV AE
Sbjct: 494 YVYDKNRKAGPNPELKKYIEKARNSSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLAE 553
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDIA VMGMGFP YR
Sbjct: 554 GIAVKAADLDIAGVMGMGFPSYR 576
>gi|34922417|sp|O49809.2|MFPA_BRANA RecName: Full=Glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a; Includes: RecName: Full=Enoyl-CoA
hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|2832898|emb|CAA04386.1| Tetrafunctional protein of glyoxysomal fatty acid beta-oxidation
[Brassica napus]
Length = 725
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/503 (78%), Positives = 451/503 (89%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LTSKPVK EE HSLGL+DAVV P +L++ AR+WALDI E R+PWV+++ KTDK+ PLG
Sbjct: 166 MILTSKPVKAEEGHSLGLIDAVVPPAELLNAARRWALDIAERRKPWVSSVLKTDKLPPLG 225
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFA+ Q R+QAPN+ HP++C++ VE G+VSG RAGL+KEA+ +++ +T K
Sbjct: 226 EAREILKFAKDQTRRQAPNMKHPLMCLEAVEVGIVSGSRAGLEKEAQVGSEVINLDTTKG 285
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FF+QRGT+KVPGVTD GL PR++ KVAI+GGGLMGSGIATALILSNY VILKEVNE
Sbjct: 286 LIHVFFSQRGTTKVPGVTDRGLVPRKINKVAIIGGGLMGSGIATALILSNYSVILKEVNE 345
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFLEAGIGRV+ANLQSRVKKGKM++EKFEKT+SLL G LDYESF+DVDMVIEA+IEN+SL
Sbjct: 346 KFLEAGIGRVKANLQSRVKKGKMSKEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISL 405
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIFADLEKYCP HCILASNTSTIDLN IGERT S+DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 406 KQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIIGAHFFSPAHVMPLLEIVRT 465
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
N TS QVIVDLLD+GKKI+KTP+VVGNCTGFAVNRMFFPYTQAA LVE GTD YLID+A
Sbjct: 466 NHTSAQVIVDLLDVGKKIRKTPVVVGNCTGFAVNRMFFPYTQAAMFLVEHGTDPYLIDKA 525
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
++KFGMPMGPFRL DLVGFGVAIAT QFIENFPERTYKSMIIP+MQEDKRAGE TRKGF
Sbjct: 526 VSKFGMPMGPFRLCDLVGFGVAIATATQFIENFPERTYKSMIIPLMQEDKRAGEATRKGF 585
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD+RRKA PDPE+K +I+KARS+SG DPK KLSEK+I+EM FFPVVNEACRVFAE
Sbjct: 586 YLYDDRRKAKPDPEIKNYIDKARSVSGAKPDPKLEKLSEKEIIEMTFFPVVNEACRVFAE 645
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDIA + GMGFPPYR
Sbjct: 646 GIAVKAADLDIAGIFGMGFPPYR 668
>gi|226506006|ref|NP_001152306.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Zea mays]
gi|195654913|gb|ACG46924.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Zea mays]
Length = 723
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/503 (77%), Positives = 452/503 (89%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SKP+KG EAH LGLVDA+V+PN LV+TARQWALDI E RRPW+ +LYKTDK+EPLG
Sbjct: 164 MMLLSKPIKGGEAHQLGLVDALVSPNDLVNTARQWALDIYECRRPWIKSLYKTDKLEPLG 223
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQA+KQA NL HP+VCIDV+E G+V+GPRAGL KEA FQ+LL S+TCKS
Sbjct: 224 EAREILKFARAQAQKQAANLHHPLVCIDVIEEGIVAGPRAGLWKEATSFQELLFSDTCKS 283
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FF+QR TSK+PG TDLGL PR++ KVAILGGGLMGSGIATA++LSNYPV+LKEVNE
Sbjct: 284 LVHVFFSQRATSKIPGATDLGLMPRKITKVAILGGGLMGSGIATAMVLSNYPVLLKEVNE 343
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL AGI R++ANLQSRV+KGKMT E++EK +SL+TGVLDYE FKDVD+VIEA+IENV L
Sbjct: 344 KFLTAGINRIQANLQSRVRKGKMTDERYEKAMSLVTGVLDYERFKDVDLVIEAVIENVKL 403
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEKYCP HCILA+NTSTIDLNLIGE+T ++DRI GAHFFSPAHVMPLLEIVRT
Sbjct: 404 KQQIFSDLEKYCPSHCILATNTSTIDLNLIGEKTKAQDRIAGAHFFSPAHVMPLLEIVRT 463
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TSPQV+VDLLD+GKKIKKTPIVVGNCTGFAVNRMFFPYTQ+A V+ G D+Y IDRA
Sbjct: 464 QHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQSALFYVDLGMDVYKIDRA 523
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
TKFGMPMGPFRLADLVGFGVA+ATGMQ++ENFPER YKSM++P+M ED RAGE T+KGF
Sbjct: 524 CTKFGMPMGPFRLADLVGFGVAVATGMQYLENFPERVYKSMLLPLMMEDNRAGEATQKGF 583
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y Y+ +RKA+PDPE+ K+IEK+RSM+GV DP+ KLSEKDIVEM+FFPV+NEACRV E
Sbjct: 584 YKYEGKRKATPDPEIMKYIEKSRSMAGVTPDPELMKLSEKDIVEMVFFPVINEACRVLDE 643
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKA+DLDIAS+ GMGFPPYR
Sbjct: 644 GIAVKASDLDIASIFGMGFPPYR 666
>gi|224033651|gb|ACN35901.1| unknown [Zea mays]
gi|413948034|gb|AFW80683.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Zea mays]
Length = 723
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/503 (77%), Positives = 452/503 (89%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SKP+KG EAH LGLVDA+V+PN LV+TARQWALDI E RRPW+ +LYKTDK+EPLG
Sbjct: 164 MMLLSKPIKGGEAHQLGLVDALVSPNDLVNTARQWALDIYECRRPWIKSLYKTDKLEPLG 223
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQA+KQA NL HP+VCIDV+E G+V+GPRAGL KEA FQ+LL S+TCKS
Sbjct: 224 EAREILKFARAQAQKQAANLHHPLVCIDVIEEGIVAGPRAGLWKEATSFQELLFSDTCKS 283
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FF+QR TSK+PG TDLGL PR++ KVAILGGGLMGSGIATA++LSNYPV+LKEVNE
Sbjct: 284 LVHVFFSQRATSKIPGATDLGLMPRKITKVAILGGGLMGSGIATAMVLSNYPVLLKEVNE 343
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL AGI R++ANLQSRVKKGKMT+E++EK +SL+TGVLDYE FKDVD+VIEA+IENV L
Sbjct: 344 KFLTAGINRIQANLQSRVKKGKMTEERYEKAMSLVTGVLDYERFKDVDLVIEAVIENVKL 403
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEKYCP HCILA+NTSTIDLNLIGE+T ++DRI GAHFFSPAHVMPLLEIVRT
Sbjct: 404 KQQIFSDLEKYCPSHCILATNTSTIDLNLIGEKTKAQDRIAGAHFFSPAHVMPLLEIVRT 463
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TSPQV+VDLLD+GKKIKKTPIVVGNCTGFAVNRMFFPYTQ+A V+ G D+Y IDRA
Sbjct: 464 QHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQSALFYVDLGMDVYKIDRA 523
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
TKFGMPMGPFRLADLVGFGVA+ATGMQ++ENFPER YKSM++P+M E RAGE T+KGF
Sbjct: 524 CTKFGMPMGPFRLADLVGFGVAVATGMQYLENFPERVYKSMLLPLMMEGNRAGEATQKGF 583
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y Y+ +RKA+PDPE+ K+IEK+RSM+GV DP+ KLSEKDIVEM+FFPV+NEACRV E
Sbjct: 584 YKYEGKRKATPDPEIMKYIEKSRSMAGVTPDPELMKLSEKDIVEMVFFPVINEACRVLDE 643
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKA+DLDIAS+ GMGFPPYR
Sbjct: 644 GIAVKASDLDIASIFGMGFPPYR 666
>gi|115436430|ref|NP_001042973.1| Os01g0348600 [Oryza sativa Japonica Group]
gi|15290204|dbj|BAB63893.1| putative tetrafunctional protein of glyoxysomal fatty acid
beta-oxidation [Oryza sativa Japonica Group]
gi|21104813|dbj|BAB93398.1| putative tetrafunctional protein of glyoxysomal fatty acid
beta-oxidation [Oryza sativa Japonica Group]
gi|113532504|dbj|BAF04887.1| Os01g0348600 [Oryza sativa Japonica Group]
gi|125570288|gb|EAZ11803.1| hypothetical protein OsJ_01677 [Oryza sativa Japonica Group]
gi|215713473|dbj|BAG94610.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218188166|gb|EEC70593.1| hypothetical protein OsI_01815 [Oryza sativa Indica Group]
Length = 727
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/503 (78%), Positives = 452/503 (89%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SKP+KG EAH LGLVD++V+ + LV+TAR+WALDI E +RPW+ +LYKTDK+EPLG
Sbjct: 168 MMLLSKPIKGAEAHQLGLVDSLVSADDLVNTARRWALDICELKRPWIKSLYKTDKLEPLG 227
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQAR+QA NL HP+VCIDV+E G+VSGPRAGL KEA FQ LL ++TCK+
Sbjct: 228 EAREILKFARAQARRQAANLEHPLVCIDVIEEGIVSGPRAGLWKEANAFQGLLFADTCKN 287
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FF+QR TSKVPG TDLGL PR+V KVAILGGGLMGSGIATA+ILSNYPVILKEVNE
Sbjct: 288 LVHVFFSQRATSKVPGATDLGLMPRKVTKVAILGGGLMGSGIATAMILSNYPVILKEVNE 347
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL AGI R++ANLQSRV+KGKMT+E++EK +SL+TGVLDYE FKDVD+VIEA+IENV L
Sbjct: 348 KFLNAGIDRIKANLQSRVRKGKMTEERYEKAMSLVTGVLDYERFKDVDLVIEAVIENVKL 407
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEKYCP HC+LA+NTSTIDLNLIGE+T SKDRIVGAHFFSPAHVMPLLEIVRT
Sbjct: 408 KQQIFSDLEKYCPSHCVLATNTSTIDLNLIGEKTRSKDRIVGAHFFSPAHVMPLLEIVRT 467
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TSPQV+VDLLD+GKKIKKTPIVVGNCTGFAVNRMFFPYTQ+A L V+ G D+Y IDRA
Sbjct: 468 QHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQSALLFVDLGMDVYKIDRA 527
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
TKFGMPMGPFRLADLVGFGVA ATGMQ++ENFPER YKSM+IP+M EDKR GE +RKGF
Sbjct: 528 CTKFGMPMGPFRLADLVGFGVAAATGMQYLENFPERVYKSMLIPLMMEDKRTGEASRKGF 587
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y Y+++RKA+PDPE+ K+IEK+RSM+GV D + KLSEKDIVEM+FFPV+NEACRV E
Sbjct: 588 YKYEDKRKATPDPEIMKYIEKSRSMAGVTPDTELMKLSEKDIVEMVFFPVINEACRVLDE 647
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKA+DLDIAS+ GMGFPPYR
Sbjct: 648 GIAVKASDLDIASIFGMGFPPYR 670
>gi|449460957|ref|XP_004148210.1| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal fatty acid
beta-oxidation multifunctional protein MFP-a-like
[Cucumis sativus]
Length = 713
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/503 (77%), Positives = 440/503 (87%), Gaps = 12/503 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKP+KG+EAHSLGLVDA+V P +L++TAR+WAL+ILE RRPWV +L++TDK+E L
Sbjct: 166 MMLTSKPIKGQEAHSLGLVDAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLA 225
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR+IF ARAQA+KQ PNL H I CID VE GVVSGPRAGL KEAE+FQ LL S+TCKS
Sbjct: 226 EARKIFNLARAQAKKQYPNLKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKS 285
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+HIFFAQR T+KVPGVTDLGL PR++KKVAI+GGGLMGSGIATALILSNYPV+LKEVN+
Sbjct: 286 LIHIFFAQRSTTKVPGVTDLGLVPRQIKKVAIVGGGLMGSGIATALILSNYPVVLKEVND 345
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AGI RVRANLQSRVKKG MT EKFEK+ISLL GVL+YESFKDVDMVIEA+IENVSL
Sbjct: 346 KFLQAGIDRVRANLQSRVKKGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSL 405
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEKYCPPHC+LA+NTSTIDL LIGER S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 406 KQQIFSDLEKYCPPHCMLATNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRT 465
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
T+ QVIVDLLD+GK IKKTP+VVGNCTGFAVNRMFFPY+QAA LL E G D Y IDRA
Sbjct: 466 KHTAAQVIVDLLDVGKNIKKTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRA 525
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+KFGMPMGPFRL DLVGFGVA AT QF+ P+MQEDK AGE+TRKGF
Sbjct: 526 ISKFGMPMGPFRLCDLVGFGVAAATASQFVX------------PLMQEDKNAGESTRKGF 573
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+YD+ RKA P+PE+KK+IEKAR+ SGV++DPK KL EKDIVEMIFFPVVNEACRV AE
Sbjct: 574 YVYDKNRKAGPNPELKKYIEKARNSSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLAE 633
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDIA VMGMGFP YR
Sbjct: 634 GIAVKAADLDIAGVMGMGFPSYR 656
>gi|326499728|dbj|BAJ86175.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 761
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/503 (77%), Positives = 451/503 (89%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SKP+KGEEAH LGLVDA+V+PN LV+TAR+ ALDI E R+PW+ +LYKTDK+EPLG
Sbjct: 201 MMLLSKPIKGEEAHQLGLVDALVSPNDLVNTARRLALDICELRKPWIKSLYKTDKLEPLG 260
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQARKQA NL HP++CIDV+E G+VSGPRAGL KEA FQ LL S+TCKS
Sbjct: 261 EAREILKFARAQARKQAANLEHPLICIDVIEEGIVSGPRAGLWKEANAFQGLLFSDTCKS 320
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FF+QR TSKVPG TDLGL PR++ KVAILGGGLMGSGIATA+ILSNYPV+LKEVNE
Sbjct: 321 LLHVFFSQRATSKVPGATDLGLMPRKIMKVAILGGGLMGSGIATAMILSNYPVLLKEVNE 380
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL AGI R++ANLQSRV+KGKMT+E++EK +SLL+G L YE FK+VD+VIEA+IENV L
Sbjct: 381 KFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLLSGALGYEKFKEVDLVIEAVIENVKL 440
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIFADLEKYCP HCILA+NTSTIDLNLIGE+T S+DRIVGAHFFSPAHVMPLLEIVRT
Sbjct: 441 KQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRT 500
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TS QV+VDLLD+GK+IKKTPIVVGNCTGFAVNRMFFPYTQ+A L V+ G D+Y IDRA
Sbjct: 501 QHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMFFPYTQSALLFVDYGLDVYKIDRA 560
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
TKFGMPMGPFRLADLVGFGVA+ATGMQ++ENFP+R YKSM+IPIM EDKRAGE +RKGF
Sbjct: 561 CTKFGMPMGPFRLADLVGFGVAVATGMQYLENFPDRVYKSMLIPIMMEDKRAGEASRKGF 620
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y Y+++RKA+PDPE+ +I+K+RSM+GV D + KLS+KDIVEM+FFPV+NEACRV E
Sbjct: 621 YKYEDKRKATPDPEIMTYIQKSRSMAGVTPDAELMKLSDKDIVEMVFFPVINEACRVLDE 680
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKA+DLDIAS+ GMGFPPYR
Sbjct: 681 GIAVKASDLDIASIFGMGFPPYR 703
>gi|357158051|ref|XP_003578000.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like [Brachypodium distachyon]
Length = 723
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/503 (76%), Positives = 450/503 (89%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L SKP+KGEEA+ GLVD++V+PN LV+ AR+WALDI E RRPW+ +LYKTDK+EPLG
Sbjct: 164 MILLSKPIKGEEAYQQGLVDSLVSPNDLVNAARRWALDICELRRPWIKSLYKTDKLEPLG 223
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQARKQA NL HP++CIDV+E G+VSGPRAGL KEA FQ LL S+TCKS
Sbjct: 224 EAREILKFARAQARKQAANLEHPLLCIDVIEEGIVSGPRAGLWKEATTFQVLLFSDTCKS 283
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FF+QR TSKVPG TDLGL PR++ KVAILGGGLMGSGIATA+ILSNYPVILKEVNE
Sbjct: 284 LVHVFFSQRATSKVPGATDLGLMPRKITKVAILGGGLMGSGIATAMILSNYPVILKEVNE 343
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL AGI R++ANLQSRV+KGKMT+E++EK +SL+TG L YE+FK+VD+VIEA+IENV L
Sbjct: 344 KFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLVTGALGYENFKEVDLVIEAVIENVKL 403
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIFADLEKYCP HCILA+NTSTIDLNLIGE+T S+DRIVGAHFFSPAHVMPLLEIVRT
Sbjct: 404 KQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRT 463
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TS QV+VDLLD+GK+IKKTPIVVGNCTGFAVNRMFFPYTQ+A L V+ G D+Y IDRA
Sbjct: 464 QHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMFFPYTQSALLFVDYGMDVYKIDRA 523
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
TKFGMPMGPFRLADLVGFGVA+ATG+Q++ENFPER YKSM+IP+M EDKRAGE T KGF
Sbjct: 524 CTKFGMPMGPFRLADLVGFGVAVATGIQYLENFPERVYKSMLIPLMMEDKRAGEATGKGF 583
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y Y+ +RK++PDP++ +I+K+RSM+GV DP+ KLS+KDIVEM+FFPV+NEACRV E
Sbjct: 584 YKYEGKRKSTPDPDIMTYIQKSRSMAGVTPDPELMKLSDKDIVEMVFFPVINEACRVLDE 643
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKA+DLDIAS+ GMGFPPYR
Sbjct: 644 GIAVKASDLDIASIFGMGFPPYR 666
>gi|116787358|gb|ABK24476.1| unknown [Picea sitchensis]
Length = 726
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/503 (74%), Positives = 446/503 (88%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L SKP+K EEA LGLVDAVV P +L+++AR+WALDI E RRPW+ +LY+TDK+EPLG
Sbjct: 167 MILLSKPIKSEEASELGLVDAVVPPLELLNSARRWALDIAEFRRPWIRSLYRTDKLEPLG 226
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFAR QA+K+A NL HP+VC+DV+E G+VSGP AGL KE FQ+LL S+ K+
Sbjct: 227 EAREILKFARIQAQKRAANLKHPLVCLDVIEEGIVSGPMAGLVKEVSSFQQLLHSDNAKA 286
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FF+QR TSKVPGVTD+GL PRRV+KVA+LGGGLMGSGIATALILS YPVILKEVN+
Sbjct: 287 LIHVFFSQRLTSKVPGVTDVGLKPRRVRKVAVLGGGLMGSGIATALILSGYPVILKEVND 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+AG+ R++ANLQSRV KGKM+QEKFEK SL+ G +DYE+F++VD+VIEA+IENV+L
Sbjct: 347 RFLQAGLERIKANLQSRVNKGKMSQEKFEKIFSLVHGTVDYENFRNVDIVIEAVIENVAL 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEK+CPPHC+LA+NTSTIDL+LIG++T S+DRIVGAHFFSPAH+MPLLEIVRT
Sbjct: 407 KQQIFSDLEKFCPPHCVLATNTSTIDLSLIGQKTNSQDRIVGAHFFSPAHIMPLLEIVRT 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQVIVDL+D+GKKIKKTPIVVGNCTGFAVNRMFFPYTQ+A L + G D+Y ID
Sbjct: 467 EKTSPQVIVDLMDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQSALFLTDLGLDVYRIDIV 526
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
IT FGMPMGPFRLADLVGF VA+ATGMQ++ENFPER YKS++IPIM EDKRAGE TRKGF
Sbjct: 527 ITSFGMPMGPFRLADLVGFEVAVATGMQYLENFPERVYKSLLIPIMLEDKRAGEKTRKGF 586
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD+RRKA PDPE+KK+IEK+RSM+G+ D K L +KDIVEM+FFPVVNEACRV E
Sbjct: 587 YLYDDRRKARPDPEIKKYIEKSRSMAGLIADGKPLSLMDKDIVEMVFFPVVNEACRVLGE 646
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GI V+A+DLDIASVMGMGFPPYR
Sbjct: 647 GITVQASDLDIASVMGMGFPPYR 669
>gi|115462175|ref|NP_001054687.1| Os05g0155000 [Oryza sativa Japonica Group]
gi|113578238|dbj|BAF16601.1| Os05g0155000 [Oryza sativa Japonica Group]
Length = 724
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/503 (71%), Positives = 435/503 (86%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SKP+K EEAH L L+DA+V+PN L++TA +WALDI E RRPWV TL +TDK+E
Sbjct: 164 MMLMSKPIKAEEAHQLALIDAIVSPNDLLNTACRWALDISESRRPWVHTLSRTDKLESPD 223
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQ +KQA NL HP+VCIDV+E G+VSGP+AGL+KEA FQ L+ S+TCKS
Sbjct: 224 EAREILKFARAQVQKQAANLRHPLVCIDVIEEGIVSGPQAGLRKEAIAFQDLVFSDTCKS 283
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FF+QR TSKVPG+TDLGL PR+V KVAI+GGGLMGSGIATAL+LSNYPV+LKEVN+
Sbjct: 284 LVHVFFSQRATSKVPGITDLGLMPRKVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVND 343
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AGI R++ANLQSRV+ GKMT+E +EKT+SLLTGV+DYE FKDVD+VIE I+ENV +
Sbjct: 344 KFLDAGIDRIKANLQSRVRNGKMTKEIYEKTLSLLTGVVDYERFKDVDLVIEEIVENVKV 403
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQ+FADLE+YCP HC+LA+NTSTIDL+LIGE+T S+DRI GAHFFSPAHVMPLLEIVR+
Sbjct: 404 KQQVFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRS 463
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
N TSPQV+VDLLD+GKKIKKTP+VVGNCTGFAVNRMF PYT A LLV+RG D+Y ID+
Sbjct: 464 NHTSPQVVVDLLDVGKKIKKTPVVVGNCTGFAVNRMFSPYTSIALLLVDRGMDVYKIDQV 523
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
T+FGMPMGPFRL DLVGFGVA+A+GMQ++EN P KSM+IP+M EDKR GE ++KGF
Sbjct: 524 CTEFGMPMGPFRLLDLVGFGVALASGMQYLENSPGSVDKSMLIPLMFEDKRTGEASQKGF 583
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y Y+ RKA PDP++ K++EK+R M+G D + KL +K+IVEM+FFPV+NEAC+V +E
Sbjct: 584 YKYEGNRKAIPDPDIFKYVEKSRRMAGTVPDLELLKLDDKEIVEMVFFPVINEACQVLSE 643
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIA KA+DLDIAS+ GMGFPPYR
Sbjct: 644 GIANKASDLDIASIFGMGFPPYR 666
>gi|222625457|gb|EEE59589.1| hypothetical protein OsJ_11897 [Oryza sativa Japonica Group]
Length = 710
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/503 (71%), Positives = 435/503 (86%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SKP+K EEAH L L+DA+V+PN L++TA +WALDI E RRPWV TL +TDK+E
Sbjct: 150 MMLMSKPIKAEEAHQLALIDAIVSPNDLLNTACRWALDISESRRPWVHTLSRTDKLESPD 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQ +KQA NL HP+VCIDV+E G+VSGP+AGL+KEA FQ L+ S+TCKS
Sbjct: 210 EAREILKFARAQVQKQAANLRHPLVCIDVIEEGIVSGPQAGLRKEAIAFQDLVFSDTCKS 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FF+QR TSKVPG+TDLGL PR+V KVAI+GGGLMGSGIATAL+LSNYPV+LKEVN+
Sbjct: 270 LVHVFFSQRATSKVPGITDLGLMPRKVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVND 329
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AGI R++ANLQSRV+ GKMT+E +EKT+SLLTGV+DYE FKDVD+VIE I+ENV +
Sbjct: 330 KFLDAGIDRIKANLQSRVRNGKMTKEIYEKTLSLLTGVVDYERFKDVDLVIEEIVENVKV 389
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQ+FADLE+YCP HC+LA+NTSTIDL+LIGE+T S+DRI GAHFFSPAHVMPLLEIVR+
Sbjct: 390 KQQVFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRS 449
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
N TSPQV+VDLLD+GKKIKKTP+VVGNCTGFAVNRMF PYT A LLV+RG D+Y ID+
Sbjct: 450 NHTSPQVVVDLLDVGKKIKKTPVVVGNCTGFAVNRMFSPYTSIALLLVDRGMDVYKIDQV 509
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
T+FGMPMGPFRL DLVGFGVA+A+GMQ++EN P KSM+IP+M EDKR GE ++KGF
Sbjct: 510 CTEFGMPMGPFRLLDLVGFGVALASGMQYLENSPGSVDKSMLIPLMFEDKRTGEASQKGF 569
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y Y+ RKA PDP++ K++EK+R M+G D + KL +K+IVEM+FFPV+NEAC+V +E
Sbjct: 570 YKYEGNRKAIPDPDIFKYVEKSRRMAGTVPDLELLKLDDKEIVEMVFFPVINEACQVLSE 629
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIA KA+DLDIAS+ GMGFPPYR
Sbjct: 630 GIANKASDLDIASIFGMGFPPYR 652
>gi|54291849|gb|AAV32217.1| putative fatty acid beta-oxidation multifunctional protein [Oryza
sativa Japonica Group]
Length = 668
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/502 (71%), Positives = 434/502 (86%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SKP+K EEAH L L+DA+V+PN L++TA +WALDI E RRPWV TL +TDK+E
Sbjct: 164 MMLMSKPIKAEEAHQLALIDAIVSPNDLLNTACRWALDISESRRPWVHTLSRTDKLESPD 223
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQ +KQA NL HP+VCIDV+E G+VSGP+AGL+KEA FQ L+ S+TCKS
Sbjct: 224 EAREILKFARAQVQKQAANLRHPLVCIDVIEEGIVSGPQAGLRKEAIAFQDLVFSDTCKS 283
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FF+QR TSKVPG+TDLGL PR+V KVAI+GGGLMGSGIATAL+LSNYPV+LKEVN+
Sbjct: 284 LVHVFFSQRATSKVPGITDLGLMPRKVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVND 343
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AGI R++ANLQSRV+ GKMT+E +EKT+SLLTGV+DYE FKDVD+VIE I+ENV +
Sbjct: 344 KFLDAGIDRIKANLQSRVRNGKMTKEIYEKTLSLLTGVVDYERFKDVDLVIEEIVENVKV 403
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQ+FADLE+YCP HC+LA+NTSTIDL+LIGE+T S+DRI GAHFFSPAHVMPLLEIVR+
Sbjct: 404 KQQVFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRS 463
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
N TSPQV+VDLLD+GKKIKKTP+VVGNCTGFAVNRMF PYT A LLV+RG D+Y ID+
Sbjct: 464 NHTSPQVVVDLLDVGKKIKKTPVVVGNCTGFAVNRMFSPYTSIALLLVDRGMDVYKIDQV 523
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
T+FGMPMGPFRL DLVGFGVA+A+GMQ++EN P KSM+IP+M EDKR GE ++KGF
Sbjct: 524 CTEFGMPMGPFRLLDLVGFGVALASGMQYLENSPGSVDKSMLIPLMFEDKRTGEASQKGF 583
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y Y+ RKA PDP++ K++EK+R M+G D + KL +K+IVEM+FFPV+NEAC+V +E
Sbjct: 584 YKYEGNRKAIPDPDIFKYVEKSRRMAGTVPDLELLKLDDKEIVEMVFFPVINEACQVLSE 643
Query: 481 GIAVKAADLDIASVMGMGFPPY 502
GIA KA+DLDIAS+ GMGFPPY
Sbjct: 644 GIANKASDLDIASIFGMGFPPY 665
>gi|255551799|ref|XP_002516945.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
gi|223544033|gb|EEF45559.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
Length = 541
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/413 (86%), Positives = 394/413 (95%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKPVKGEEAH+LGLVDA+V+PN+LV+TAR+WALD+LE R+PWVA+LYKT+K++ LG
Sbjct: 24 MMLTSKPVKGEEAHALGLVDALVSPNELVTTARRWALDMLEGRKPWVASLYKTEKLDSLG 83
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREIFKFARAQARKQAPNL HP+VCIDVVE G+VSGPRAG+ KEAE+FQ L++S TCKS
Sbjct: 84 EAREIFKFARAQARKQAPNLKHPLVCIDVVEEGIVSGPRAGIWKEAEEFQVLVKSNTCKS 143
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVHIFFAQRGT+KVPG+TD GL PRRV KVA+LGGGLMGSGIATALILSNYPVILKEVN+
Sbjct: 144 LVHIFFAQRGTTKVPGITDKGLIPRRVNKVAVLGGGLMGSGIATALILSNYPVILKEVNQ 203
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+AGI RVRANLQSRVKKGKM+QEKFEKT+SLL GVLDYESFKDVDMVIEA+IENVSL
Sbjct: 204 QFLDAGINRVRANLQSRVKKGKMSQEKFEKTLSLLKGVLDYESFKDVDMVIEAVIENVSL 263
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIFADLEKYCPPHCILASNTSTIDLNLIG++T S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 264 KQQIFADLEKYCPPHCILASNTSTIDLNLIGQKTRSQDRIIGAHFFSPAHIMPLLEIVRT 323
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
NQTS Q IVDLLD+GKKI+KTP+VVGNCTGFAVNRMFFPYTQAA LLVE GTD Y IDRA
Sbjct: 324 NQTSAQAIVDLLDVGKKIRKTPVVVGNCTGFAVNRMFFPYTQAAILLVEHGTDPYQIDRA 383
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAG 413
ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM+IP++QEDKRAG
Sbjct: 384 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMLIPLLQEDKRAG 436
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 29/38 (76%), Gaps = 3/38 (7%)
Query: 466 IFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ P++ E R GIAVKAADLDIASVMGMGFPPYR
Sbjct: 424 MLIPLLQEDKRA---GIAVKAADLDIASVMGMGFPPYR 458
>gi|357135448|ref|XP_003569321.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like [Brachypodium distachyon]
Length = 748
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/503 (68%), Positives = 429/503 (85%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK +KG EAH LGLVDA+V+ N+LV+TA WAL+I EH+RPW +L++TDK+ L
Sbjct: 189 MMLMSKSIKGVEAHKLGLVDAIVSANELVNTACSWALEIAEHKRPWFKSLHRTDKLPDLQ 248
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EA+EI K +R +A+KQA NL HP+VCIDV+EAGV+SGPRAGL KE + L +S+T KS
Sbjct: 249 EAKEILKISRVKAQKQAANLQHPLVCIDVIEAGVLSGPRAGLMKEVVSGKMLEQSQTSKS 308
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+FFAQR TSK+P VT+LGL PRR+ K AI+GGGLMGSGIATAL+L+N VILKEVNE
Sbjct: 309 LRHVFFAQRATSKIPEVTNLGLTPRRILKAAIVGGGLMGSGIATALVLNNMFVILKEVNE 368
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AGI RV+ANLQS VK+G+MT++ +EK +SLL+GVLDYE F+D D+VIEA+IE++ L
Sbjct: 369 KFLDAGINRVKANLQSFVKRGRMTKDDYEKKLSLLSGVLDYEQFRDADVVIEAVIEDILL 428
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IF+DLE+YC +CI+A+NTSTIDL LIG++T +DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 429 KQKIFSDLERYCHSNCIIATNTSTIDLQLIGQKTSCQDRIIGAHFFSPAHVMPLLEIVRT 488
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TS QVIVDLLD+ KKI+KTPIVVGNCTGFAVNRMFFPY Q A LLV+ G D+Y ID
Sbjct: 489 QHTSSQVIVDLLDLAKKIRKTPIVVGNCTGFAVNRMFFPYGQVAGLLVDYGLDVYRIDHV 548
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
IT+FGMPMGPFRLADLVGFGVA+AT Q+ ++FPER YKSM+ IM +DKR GE++ +G+
Sbjct: 549 ITQFGMPMGPFRLADLVGFGVAVATRKQYYQSFPERCYKSMLTDIMLKDKRTGESSGRGY 608
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD++RKASPDP+++K++EK+R+M+GVA DPK KL++ DIVEM+FFPVVNEACRV E
Sbjct: 609 YLYDDKRKASPDPDIQKYVEKSRNMAGVAKDPKVMKLTDSDIVEMVFFPVVNEACRVLDE 668
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIA+KA+DLD+AS+MGMGFP YR
Sbjct: 669 GIALKASDLDVASIMGMGFPSYR 691
>gi|326494018|dbj|BAJ85471.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 716
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/503 (66%), Positives = 420/503 (83%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK +KG EAH GLVD++V+ ++LVSTA AL+ILEH+RPW+ +L +TD++ +
Sbjct: 159 MMLMSKSIKGVEAHKFGLVDSIVSADKLVSTACSCALEILEHKRPWLKSLLRTDRLTDIM 218
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EA++I KFARA+A KQA NL HP+VCIDV+E G++ GPRA L KE + L +S+T KS
Sbjct: 219 EAKKILKFARAEALKQAANLQHPLVCIDVIEEGILFGPRAALMKEVLSGKMLEQSQTSKS 278
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+FFAQR TSK+P + +LGL PRR+ K AI+GGGLMGSGIATA ILS+ V+LKEVNE
Sbjct: 279 LRHVFFAQRATSKIPNIINLGLTPRRILKAAIVGGGLMGSGIATAFILSDIVVVLKEVNE 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL GI R++ANLQS VKKG+M +E ++K +SLL+GVLDYE F+D D+VIEA+IE++SL
Sbjct: 339 KFLNTGINRIKANLQSFVKKGRMAKEDYDKKLSLLSGVLDYEQFRDADVVIEAVIEDISL 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLE+ C +CI A+NTSTIDL LIG++T +DRIVGAHFFSPAHVMPLLEIVRT
Sbjct: 399 KQQIFSDLERSCHSNCIFATNTSTIDLQLIGQQTACQDRIVGAHFFSPAHVMPLLEIVRT 458
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
QTS QVIVDLLD+ KKI+KTPIVVG+CTGFAVNRMFFPY QAA LLV G D+Y ID
Sbjct: 459 QQTSSQVIVDLLDVAKKIRKTPIVVGSCTGFAVNRMFFPYGQAAGLLVNYGLDVYHIDHV 518
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I KFGMPMGPFRLADLVGFGVA+ATG Q+ +++PER YKS + IM ++ R GE++R+GF
Sbjct: 519 IAKFGMPMGPFRLADLVGFGVAVATGKQYYQSYPERCYKSHLTEIMLKENRTGESSRRGF 578
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD++R+ASPDP++KK++E +R+M+GVA DPK KL++KDIVEM+FFPVVNEACRV E
Sbjct: 579 YLYDDKREASPDPDIKKYVENSRNMAGVAQDPKLLKLTDKDIVEMVFFPVVNEACRVLDE 638
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIA+KA+DLD+AS+MGMGFP +R
Sbjct: 639 GIALKASDLDVASIMGMGFPSFR 661
>gi|218196641|gb|EEC79068.1| hypothetical protein OsI_19644 [Oryza sativa Indica Group]
Length = 718
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/503 (65%), Positives = 424/503 (84%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L SKP+KG EAH GLVDAVV+ ++L+STA WAL+I+E +RPW +L++TD++ L
Sbjct: 159 MLLMSKPLKGVEAHKFGLVDAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALE 218
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E ++I FAR QA+KQ+ +L HP+VCIDV+E G++SGPRAGL KE + L S+ KS
Sbjct: 219 ETKKILNFARVQAQKQSASLQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKS 278
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+FFAQR TSK+P +++LGL PRR+ KVAI+GGGLMGSGIATALI +N VILKEVNE
Sbjct: 279 LRHVFFAQRATSKIPNISNLGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNE 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+AGI RV+ANLQS VK+G+MT+E +E +SLL+GVLDYE F++ D+VIEA+IE++SL
Sbjct: 339 QFLDAGISRVKANLQSLVKRGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSL 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IFADLEKYC +CILA+NTSTIDL+LIG++T +DRI GAHFFSPAH MPLLEI+RT
Sbjct: 399 KQKIFADLEKYCHSNCILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRT 458
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TS QV++DLL++ K+I+KTPIVVGNCTGFAVNRMFFP+TQ A+ LV+ G D+Y ID
Sbjct: 459 HRTSSQVVIDLLNVAKQIRKTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYGLDVYHIDHV 518
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
ITKFGMPMGPFRLADLVGFGVAIA+ Q+++++PER YKSM+I IM E+ R GE++RKGF
Sbjct: 519 ITKFGMPMGPFRLADLVGFGVAIASRKQYLQSYPERCYKSMLIQIMLEENRTGESSRKGF 578
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD++RKASPDPE+ K+IEK+RSM+ + DPK KL++ +IVEM+ FPVVNEACR+ E
Sbjct: 579 YLYDDKRKASPDPEMNKYIEKSRSMASIVQDPKLPKLTDDEIVEMMLFPVVNEACRLLDE 638
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+A+KA+DLD+AS+MG GFP YR
Sbjct: 639 GVAMKASDLDVASIMGRGFPSYR 661
>gi|47777470|gb|AAT38103.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
protein [Oryza sativa Japonica Group]
Length = 724
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/503 (65%), Positives = 423/503 (84%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L SKP+KG EAH GLVDAVV+ ++L+STA WAL+I+E +RPW +L++TD++ L
Sbjct: 165 MLLMSKPLKGVEAHKFGLVDAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALE 224
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E ++I FAR QA+KQ+ +L HP+VCIDV+E G++SGPRAGL KE + L S+ KS
Sbjct: 225 ETKKILNFARVQAQKQSASLQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKS 284
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+FFAQR TSK+P ++ LGL PRR+ KVAI+GGGLMGSGIATALI +N VILKEVNE
Sbjct: 285 LRHVFFAQRATSKIPNISILGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNE 344
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+AGI RV+ANLQS VK+G+MT+E +E +SLL+GVLDYE F++ D+VIEA+IE++SL
Sbjct: 345 QFLDAGISRVKANLQSLVKRGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSL 404
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IFADLEKYC +CILA+NTSTIDL+LIG++T +DRI GAHFFSPAH MPLLEI+RT
Sbjct: 405 KQKIFADLEKYCHSNCILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRT 464
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TS QV++DLL++ K+I+KTPIVVGNCTGFAVNRMFFP+TQ A+ LV+ G D+Y ID
Sbjct: 465 HRTSSQVVIDLLNVAKQIRKTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYGLDVYHIDHV 524
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
ITKFGMPMGPFRLADLVGFGVAIA+ Q+++++PER YKSM+I IM E+ R GE++RKGF
Sbjct: 525 ITKFGMPMGPFRLADLVGFGVAIASRKQYLQSYPERCYKSMLIQIMLEENRTGESSRKGF 584
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD++RKASPDPE+ K+IEK+RSM+ + DPK KL++ +IVEM+ FPVVNEACR+ E
Sbjct: 585 YLYDDKRKASPDPEMNKYIEKSRSMASIVQDPKLPKLTDDEIVEMMLFPVVNEACRLLDE 644
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+A+KA+DLD+AS+MG GFP YR
Sbjct: 645 GVAMKASDLDVASIMGRGFPSYR 667
>gi|222631293|gb|EEE63425.1| hypothetical protein OsJ_18237 [Oryza sativa Japonica Group]
Length = 718
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/503 (65%), Positives = 423/503 (84%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L SKP+KG EAH GLVDAVV+ ++L+STA WAL+I+E +RPW +L++TD++ L
Sbjct: 159 MLLMSKPLKGVEAHKFGLVDAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALE 218
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E ++I FAR QA+KQ+ +L HP+VCIDV+E G++SGPRAGL KE + L S+ KS
Sbjct: 219 ETKKILNFARVQAQKQSASLQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKS 278
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+FFAQR TSK+P ++ LGL PRR+ KVAI+GGGLMGSGIATALI +N VILKEVNE
Sbjct: 279 LRHVFFAQRATSKIPNISILGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNE 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+AGI RV+ANLQS VK+G+MT+E +E +SLL+GVLDYE F++ D+VIEA+IE++SL
Sbjct: 339 QFLDAGISRVKANLQSLVKRGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSL 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IFADLEKYC +CILA+NTSTIDL+LIG++T +DRI GAHFFSPAH MPLLEI+RT
Sbjct: 399 KQKIFADLEKYCHSNCILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRT 458
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TS QV++DLL++ K+I+KTPIVVGNCTGFAVNRMFFP+TQ A+ LV+ G D+Y ID
Sbjct: 459 HRTSSQVVIDLLNVAKQIRKTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYGLDVYHIDHV 518
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
ITKFGMPMGPFRLADLVGFGVAIA+ Q+++++PER YKSM+I IM E+ R GE++RKGF
Sbjct: 519 ITKFGMPMGPFRLADLVGFGVAIASRKQYLQSYPERCYKSMLIQIMLEENRTGESSRKGF 578
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD++RKASPDPE+ K+IEK+RSM+ + DPK KL++ +IVEM+ FPVVNEACR+ E
Sbjct: 579 YLYDDKRKASPDPEMNKYIEKSRSMASIVQDPKLPKLTDDEIVEMMLFPVVNEACRLLDE 638
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+A+KA+DLD+AS+MG GFP YR
Sbjct: 639 GVAMKASDLDVASIMGRGFPSYR 661
>gi|413945015|gb|AFW77664.1| hypothetical protein ZEAMMB73_186479 [Zea mays]
Length = 718
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/503 (65%), Positives = 417/503 (82%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSK +KG+ AH LGLVDAV + N+LV+TA WAL+I E ++PW +L++TD++ L
Sbjct: 159 MMLTSKTIKGKMAHELGLVDAVTSANKLVNTACSWALEIFEKKKPWFKSLHRTDRLPDLE 218
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E ++I KFAR QA +A N+ HPIVCIDV++ G++SGPRAGL KE + L +S+T KS
Sbjct: 219 EVKDILKFARVQAEMKAANVQHPIVCIDVIKEGIISGPRAGLMKEVLSGKMLEQSQTSKS 278
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H FFAQR TSK+P +T++GL R++KK AI+GGGLMGSGIAT LIL+N+ V+LKEVNE
Sbjct: 279 LRHFFFAQRATSKIPNITNIGLTARKIKKAAIVGGGLMGSGIATILILNNFNVVLKEVNE 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL AGI R++ NLQS V+KG++T+E +EK +SLL G LDYE F+D D+VIEA+IE++ L
Sbjct: 339 QFLSAGINRIKVNLQSLVRKGQLTEEDYEKKLSLLCGALDYEQFRDTDVVIEAVIEDMVL 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEKYC +CI A+NTSTIDLN+IG++T S+DRIVGAHFFSPAHVM LLEIV T
Sbjct: 399 KQQIFSDLEKYCHHNCIFATNTSTIDLNIIGQKTASQDRIVGAHFFSPAHVMSLLEIVCT 458
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ TS QVIVDL+D+ KKI+KTPIVVGNCTGFAVNRMFFPY QAA LV+ G D+Y ID
Sbjct: 459 HHTSSQVIVDLIDLAKKIQKTPIVVGNCTGFAVNRMFFPYAQAASFLVDYGLDVYHIDHV 518
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
IT+FGMPMGPFRLADLVGFGVAIAT Q+ +++PER+YKSM++ I+ ED R GE++ KGF
Sbjct: 519 ITQFGMPMGPFRLADLVGFGVAIATRKQYYQSYPERSYKSMLLQILVEDNRTGESSCKGF 578
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+YD++RKAS DP+ K+IEK+R+M+GV DPK KL++ DIVEMIFFPVVNEACRV E
Sbjct: 579 YVYDDKRKASRDPDFGKYIEKSRNMAGVMQDPKLMKLTDNDIVEMIFFPVVNEACRVLDE 638
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIA+KA+DLD+AS+MGMGFP YR
Sbjct: 639 GIALKASDLDVASIMGMGFPSYR 661
>gi|148910098|gb|ABR18131.1| unknown [Picea sitchensis]
Length = 723
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/503 (64%), Positives = 414/503 (82%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + EE + LGL+DAVV+P +L++TAR WALDI E RRPW+ +L +TDK+E LG
Sbjct: 162 MMLLSKSIMSEEGNKLGLIDAVVSPGELMTTARMWALDIAERRRPWIISLKRTDKLESLG 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQA+K APNL HP +C+DV+E G+V+G AG+ KE + F ++ S+T K
Sbjct: 222 EAREILKFARAQAKKTAPNLPHPQLCLDVIEEGIVAGGLAGVLKEEKGFNDIVISDTAKG 281
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FF+QR T+KVPGVTDLGL PR++KKVA+LGGGLMGSGIAT+L+LSN PV+LKEVN
Sbjct: 282 LVHFFFSQRATTKVPGVTDLGLKPRQIKKVAVLGGGLMGSGIATSLVLSNIPVVLKEVNA 341
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
FL+ GI R+ ANL+SRVKKG MT+EKFEKT+SL+TGV+DY F++VDMVIEA++E +SL
Sbjct: 342 GFLQQGINRISANLKSRVKKGSMTEEKFEKTMSLITGVVDYAEFRNVDMVIEAVLEKISL 401
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IF+DLEK CP HCILA+NTSTIDLNLIG +T+ +DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 402 KQEIFSDLEKICPAHCILATNTSTIDLNLIGAKTHVQDRIIGAHFFSPAHVMPLLEIVRT 461
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQ+I+DL+++GK IKK P+VVGNCTGFAVNRMFFPYTQAA +L G D+Y ID+
Sbjct: 462 EKTSPQIIIDLINVGKNIKKVPVVVGNCTGFAVNRMFFPYTQAAHMLANLGVDIYRIDKV 521
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
IT FGMPMGPFRL DLVG+GV++ G QF+ F +RT+ S + +M E+KRAGE KG+
Sbjct: 522 ITSFGMPMGPFRLQDLVGYGVSLEVGKQFVTAFADRTFTSPLTQLMIENKRAGEKNGKGY 581
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+YDE+R+A P PEVK+ IE++ ++ + K +++++I+EMIFFPVVNEACRV E
Sbjct: 582 YVYDEKRRARPAPEVKEIIEQSIKITKIMPGGKAVVVTDREILEMIFFPVVNEACRVLDE 641
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIA KA+DLD++ V+GMGFP YR
Sbjct: 642 GIASKASDLDVSVVLGMGFPSYR 664
>gi|242087635|ref|XP_002439650.1| hypothetical protein SORBIDRAFT_09g017970 [Sorghum bicolor]
gi|241944935|gb|EES18080.1| hypothetical protein SORBIDRAFT_09g017970 [Sorghum bicolor]
Length = 718
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/503 (66%), Positives = 412/503 (81%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK +KG A LGLVDAV + N+LV+ A WAL+I+E ++PW +L++TDK+ L
Sbjct: 159 MMLMSKTIKGMGAQELGLVDAVTSANELVNAACSWALEIVEKKKPWFRSLHRTDKLPDLA 218
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E +++ KFAR QA+ + N+ HPIVCIDV+E G+VSGPRAGL KE + L +S+T KS
Sbjct: 219 EVKDVLKFARVQAKMKGANVQHPIVCIDVIEEGIVSGPRAGLMKETLSGKMLEQSQTSKS 278
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H FFAQR TSK+P +T++GL R++KK AI+GGGLMGSGIAT LIL+N+ V+LKEVNE
Sbjct: 279 LRHFFFAQRATSKIPNITNMGLTARKIKKAAIIGGGLMGSGIATILILNNFSVVLKEVNE 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL GI R++ANLQS VKKG++ E ++K +SLL GVLDYE F+D D+VIEA+IE++ L
Sbjct: 339 EFLSTGINRIKANLQSFVKKGQLAIEDYKKKLSLLCGVLDYEQFRDTDVVIEAVIEDMFL 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEKYC +CI A+NTSTIDLN+IGE+T S+DRIVGAHFFSPAHVMPLLEIV T
Sbjct: 399 KQQIFSDLEKYCHHNCIFATNTSTIDLNIIGEKTASQDRIVGAHFFSPAHVMPLLEIVCT 458
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ TS QVIVDLLD+ KKI+KTPIVVGNCTGFAVNRMFFPY QAA LV+ G D+Y D
Sbjct: 459 HHTSSQVIVDLLDLAKKIQKTPIVVGNCTGFAVNRMFFPYAQAACFLVDHGLDVYHTDHV 518
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
IT+FGMPMGPFRLADLVGFGVAIAT Q+ +++P R YKSMI+ I+ ED R GE++RKGF
Sbjct: 519 ITQFGMPMGPFRLADLVGFGVAIATRKQYYQSYPGRCYKSMILQILVEDNRTGESSRKGF 578
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+YD +RKAS DP++ K+IEK+R+M+GV DPK KL++ DIVEMIFFPVVNEACRV E
Sbjct: 579 YVYDNKRKASRDPDLGKYIEKSRNMAGVMQDPKLMKLTDNDIVEMIFFPVVNEACRVLDE 638
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIA+KA+DLD+AS+MGMGFP YR
Sbjct: 639 GIALKASDLDVASIMGMGFPSYR 661
>gi|449532298|ref|XP_004173119.1| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal fatty acid
beta-oxidation multifunctional protein MFP-a-like,
partial [Cucumis sativus]
Length = 459
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/402 (81%), Positives = 372/402 (92%)
Query: 102 LQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSG 161
L +E EDFQ LL ++T KSL+H+F +QRGT+KVPGV+DLGL PRR+ KVA++GGGLMGSG
Sbjct: 1 LWQEIEDFQVLLHADTSKSLIHVFLSQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSG 60
Query: 162 IATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDY 221
IATALILSNYPVILKEVNEKFLEAG+GRV+ANLQSRV+KG MT EKFE+TISLL GVLDY
Sbjct: 61 IATALILSNYPVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDY 120
Query: 222 ESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIV 281
ESFKDVDMVIEA+IEN+SLKQQI DLEKYCPPHCILA+NTSTIDL+LIGE+T S DRIV
Sbjct: 121 ESFKDVDMVIEAVIENISLKQQIIVDLEKYCPPHCILATNTSTIDLDLIGEKTNSHDRIV 180
Query: 282 GAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYT 341
GAHFFSPAHVMPLLE+VR N+T+PQVIVDL+D+ K+IKKTP+VVGNCTGFAVNRMFFPYT
Sbjct: 181 GAHFFSPAHVMPLLEVVRXNRTAPQVIVDLVDVEKRIKKTPVVVGNCTGFAVNRMFFPYT 240
Query: 342 QAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM 401
QAA LLVE G D Y IDRAI KFGMPMGPFRL DLVGFGVAIATG QF++NFP+RT+KSM
Sbjct: 241 QAALLLVEHGVDPYQIDRAIYKFGMPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSM 300
Query: 402 IIPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
IIP+MQEDKRAGETT+KGFYLYD+ RK+ PDPE+KK+IEKARSMSG+++DPK AK+S+KD
Sbjct: 301 IIPLMQEDKRAGETTQKGFYLYDKNRKSKPDPELKKYIEKARSMSGISVDPKLAKISDKD 360
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
I+EMIFFPVVNEACRV AEGIAVKAADLDIA VMGMGFPPYR
Sbjct: 361 IIEMIFFPVVNEACRVLAEGIAVKAADLDIAGVMGMGFPPYR 402
>gi|302792475|ref|XP_002978003.1| hypothetical protein SELMODRAFT_176660 [Selaginella moellendorffii]
gi|300154024|gb|EFJ20660.1| hypothetical protein SELMODRAFT_176660 [Selaginella moellendorffii]
Length = 721
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/503 (66%), Positives = 407/503 (80%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SKPV EE LGLVD +V +++TAR+ A+DI E RRPW TL+KTDK+EPLG
Sbjct: 162 MMLLSKPVTSEEGKELGLVDELVPAEAVLTTARKVAVDIAEGRRPWCITLHKTDKLEPLG 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQA K AP LTHP VC+D +E G+V G AGL KE + FQ+ L S+ KS
Sbjct: 222 EAREILKFARAQAMKTAPKLTHPHVCLDAIEEGIVKGGFAGLLKEEKAFQEALFSDASKS 281
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L HIFFAQR TSKVPGVTD+GL P+ VKKVA++GGG MGSGI TALILSN V+LKEVN
Sbjct: 282 LTHIFFAQRSTSKVPGVTDVGLKPKVVKKVAVIGGGFMGSGIVTALILSNIKVVLKEVNS 341
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
FL+ G+ RV+ NLQSRVKKGK++++KFE+ ISL+ GVLDYE F VD+VIEA++ENV L
Sbjct: 342 DFLQQGLNRVKGNLQSRVKKGKLSKDKFERAISLVEGVLDYEQFGSVDVVIEAVVENVGL 401
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIFADLEK+C P C+LASNTSTIDLN++G +T ++DRI+GAHFFSPAHVMPLLE+VRT
Sbjct: 402 KQQIFADLEKFCSPSCVLASNTSTIDLNVVGSKTKAQDRIIGAHFFSPAHVMPLLEVVRT 461
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQVI+DL+ +GK IKK P+VVGNCTGFAVNR+FFPYTQAA +L++ G D Y IDRA
Sbjct: 462 EKTSPQVILDLMTLGKTIKKIPVVVGNCTGFAVNRVFFPYTQAATMLLDLGVDPYRIDRA 521
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
IT FGMPMGPFRLAD VGFGVA+A G Q++ +FPER Y S I P+M DKR GE RKGF
Sbjct: 522 ITGFGMPMGPFRLADFVGFGVAVAVGQQYLNSFPERVYVSQIFPLMFSDKRLGEGNRKGF 581
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYDE+RK P PE++ +++K+R ++ + K +++K+IVEMI FPVVNEACRV E
Sbjct: 582 YLYDEKRKPRPAPELQGYVDKSRQLAKLMPGGKPINITDKEIVEMILFPVVNEACRVLEE 641
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+ VKA+DLDIA+V+GMGFPPY+
Sbjct: 642 GVVVKASDLDIATVLGMGFPPYK 664
>gi|302766649|ref|XP_002966745.1| hypothetical protein SELMODRAFT_168461 [Selaginella moellendorffii]
gi|300166165|gb|EFJ32772.1| hypothetical protein SELMODRAFT_168461 [Selaginella moellendorffii]
Length = 721
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/503 (66%), Positives = 407/503 (80%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SKPV EE LGLVD +V +++TAR+ A+DI E RRPW TL+KTDK+EPLG
Sbjct: 162 MMLLSKPVTSEEGKELGLVDELVPAEAVLTTARKVAVDIAEGRRPWCITLHKTDKLEPLG 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQA K AP LTHP VC+D +E G+V G AGL KE + FQ+ L S+ KS
Sbjct: 222 EAREILKFARAQAMKTAPKLTHPHVCLDAIEEGIVKGGFAGLLKEEKAFQEALFSDASKS 281
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L HIFFAQR TSKVPGVTD+GL P+ VKKVA++GGG MGSGI TALILSN V+LKEVN
Sbjct: 282 LTHIFFAQRSTSKVPGVTDVGLKPKVVKKVAVIGGGFMGSGIVTALILSNIKVVLKEVNS 341
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
FL+ G+ RV+ NLQSRVKKGK++++KFE+ ISL+ GVLDYE F VD+VIEA++ENV L
Sbjct: 342 DFLQQGLNRVKGNLQSRVKKGKLSKDKFERAISLVEGVLDYEQFGSVDVVIEAVVENVGL 401
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIFADLEK+C P C+LASNTSTIDLN++G +T ++DRI+GAHFFSPAHVMPLLE+VRT
Sbjct: 402 KQQIFADLEKFCSPSCVLASNTSTIDLNVVGSKTKAQDRIIGAHFFSPAHVMPLLEVVRT 461
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQVI+DL+ +GK IKK P+VVGNCTGFAVNR+FFPYTQAA +L++ G D Y IDRA
Sbjct: 462 EKTSPQVILDLMTLGKTIKKIPVVVGNCTGFAVNRVFFPYTQAATMLLDLGIDPYRIDRA 521
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
IT FGMPMGPFRLAD VGFGVA+A G Q++ +FPER Y S I P+M DKR GE RKGF
Sbjct: 522 ITGFGMPMGPFRLADFVGFGVAVAVGQQYLNSFPERVYVSQIFPLMFSDKRLGEGNRKGF 581
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYDE+RK P PE++ +++K+R ++ + K +++K+IVEMI FPVVNEACRV E
Sbjct: 582 YLYDEKRKPRPAPELQGYVDKSRQLAKLMPGGKPINITDKEIVEMILFPVVNEACRVLEE 641
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+ VKA+DLDIA+V+GMGFPPY+
Sbjct: 642 GVVVKASDLDIATVLGMGFPPYK 664
>gi|168025753|ref|XP_001765398.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683451|gb|EDQ69861.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 722
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/503 (64%), Positives = 410/503 (81%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SKP+ EE LGL+D +V+P L+ TARQWALDI ++P +++L++TDK+E LG
Sbjct: 163 MMLLSKPIASEEGKQLGLIDEIVSPKDLLVTARQWALDIASGKKPRLSSLHRTDKLESLG 222
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFARAQ ++ APNLTHP++C+D VE GV++G AG KEAE F + S+ K
Sbjct: 223 EAREIIKFARAQVKRTAPNLTHPLLCLDAVEEGVIAGGYAGNLKEAEAFAAAVVSDNAKG 282
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LV++FFAQR T+KVPG+ +LGL PR+++ VA++GGGLMGSGI TAL+LS Y VILKE+N+
Sbjct: 283 LVNVFFAQRATTKVPGIAELGLKPRKIQNVAVVGGGLMGSGIVTALVLSGYSVILKEIND 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AG+GRV+ANLQSRVKKGKM+QEKFEKT+SL+ GVL Y+ FK VDMVIEA+IEN+ L
Sbjct: 343 KFLQAGLGRVKANLQSRVKKGKMSQEKFEKTLSLVKGVLTYDVFKSVDMVIEAVIENIDL 402
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF DLEK C CILA+NTSTIDLNL+G +T S+DR++GAHFFSPAH+MPLLEIVRT
Sbjct: 403 KQSIFVDLEKNCKNDCILATNTSTIDLNLVGAKTRSQDRLIGAHFFSPAHIMPLLEIVRT 462
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TSPQ IVDL+ +GK IKKTP++VGNCTGFAVNR+FFPYT AA +L + G D+Y ID A
Sbjct: 463 DKTSPQAIVDLMALGKAIKKTPVLVGNCTGFAVNRVFFPYTMAAMMLSDLGVDIYRIDNA 522
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I +GMPMGPFRL DLVGFGV A G QF++ FP+R Y S ++P M E +R GE RKGF
Sbjct: 523 IKSWGMPMGPFRLTDLVGFGVGAAVGAQFVKAFPDRVYVSKLLPRMLEAQRLGEQNRKGF 582
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+YDE+RKA P PE+K+ I+++++ SG+ + K +++KDIVEMI FPVVNEACRV AE
Sbjct: 583 YVYDEKRKARPAPEIKEIIKESQAESGIMPNGKPLAMTDKDIVEMIMFPVVNEACRVLAE 642
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
I V+A+DLDIASV+GMGFPPYR
Sbjct: 643 KIVVQASDLDIASVLGMGFPPYR 665
>gi|413948032|gb|AFW80681.1| hypothetical protein ZEAMMB73_867373 [Zea mays]
Length = 460
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/400 (78%), Positives = 361/400 (90%)
Query: 104 KEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA 163
+EA FQ+LL S+TCKSLVH+FF+QR TSK+PG TDLGL PR++ KVAILGGGLMGSGIA
Sbjct: 4 QEATSFQELLFSDTCKSLVHVFFSQRATSKIPGATDLGLMPRKITKVAILGGGLMGSGIA 63
Query: 164 TALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYES 223
TA++LSNYPV+LKEVNEKFL AGI R++ANLQSRVKKGKMT+E++EK +SL+TGVLDYE
Sbjct: 64 TAMVLSNYPVLLKEVNEKFLTAGINRIQANLQSRVKKGKMTEERYEKAMSLVTGVLDYER 123
Query: 224 FKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGA 283
FKDVD+VIEA+IENV LKQQIF+DLEKYCP HCILA+NTSTIDLNLIGE+T ++DRI GA
Sbjct: 124 FKDVDLVIEAVIENVKLKQQIFSDLEKYCPSHCILATNTSTIDLNLIGEKTKAQDRIAGA 183
Query: 284 HFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQA 343
HFFSPAHVMPLLEIVRT TSPQV+VDLLD+GKKIKKTPIVVGNCTGFAVNRMFFPYTQ+
Sbjct: 184 HFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQS 243
Query: 344 AFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMII 403
A V+ G D+Y IDRA TKFGMPMGPFRLADLVGFGVA+ATGMQ++ENFPER YKSM++
Sbjct: 244 ALFYVDLGMDVYKIDRACTKFGMPMGPFRLADLVGFGVAVATGMQYLENFPERVYKSMLL 303
Query: 404 PIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIV 463
P+M E RAGE T+KGFY Y+ +RKA+PDPE+ K+IEK+RSM+GV DP+ KLSEKDIV
Sbjct: 304 PLMMEGNRAGEATQKGFYKYEGKRKATPDPEIMKYIEKSRSMAGVTPDPELMKLSEKDIV 363
Query: 464 EMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
EM+FFPV+NEACRV EGIAVKA+DLDIAS+ GMGFPPYR
Sbjct: 364 EMVFFPVINEACRVLDEGIAVKASDLDIASIFGMGFPPYR 403
>gi|168042293|ref|XP_001773623.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675011|gb|EDQ61511.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 732
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/499 (63%), Positives = 400/499 (80%)
Query: 5 SKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEARE 64
SKP+ EE LGLVD +VAP L++ AR+WALDI +RP +++L +TDK+E LG+ARE
Sbjct: 177 SKPIASEEGKKLGLVDEIVAPEDLLTIARRWALDIALGKRPRLSSLQRTDKLESLGDARE 236
Query: 65 IFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHI 124
I KFARAQ +K APNLTHP++C+D VE GVV+G G KEAE F + S+ K LV++
Sbjct: 237 IIKFARAQVKKTAPNLTHPLLCLDAVEEGVVAGGYRGALKEAELFAATVVSDNAKGLVNL 296
Query: 125 FFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLE 184
FFA R TSKVPG+ +LGL PR++KKVA++GGGLMGSGI TALILS Y V+LKE+N+KFL+
Sbjct: 297 FFAIRATSKVPGIVELGLKPRKIKKVAVVGGGLMGSGIVTALILSGYSVLLKEINDKFLQ 356
Query: 185 AGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQI 244
AG+ R++ANLQSRVKKGKM++EKFE +SL+TGVL YE FK VD+VIEA+IEN+ LKQ I
Sbjct: 357 AGLERIKANLQSRVKKGKMSREKFETILSLVTGVLTYEDFKSVDVVIEAVIENIDLKQSI 416
Query: 245 FADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTS 304
F DLEK C CIL++NTSTIDLN++G +T S+DRI+GAHFFSPAH+MPLLEIVRT++TS
Sbjct: 417 FVDLEKNCRTDCILSTNTSTIDLNVLGAKTRSQDRIIGAHFFSPAHIMPLLEIVRTDKTS 476
Query: 305 PQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKF 364
PQVIVDL+ +GK IKKT ++VGNCTGFAVNR+FFPYT AA +L + G D+Y ID AI +
Sbjct: 477 PQVIVDLMALGKAIKKTTVLVGNCTGFAVNRVFFPYTMAAMMLSDLGVDIYRIDNAIKSW 536
Query: 365 GMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYD 424
GMPMGPFRL DLVGFGV +A G Q + +F +R Y S ++P M + +R GE KGFY+YD
Sbjct: 537 GMPMGPFRLTDLVGFGVGVAVGTQVVNSFSDRVYISRLVPKMLQSQRLGEQNGKGFYIYD 596
Query: 425 ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
E+RKA P PE+K I++++ +G+ +D K +L++KDIVEM+ FPVVNEACRV AE I V
Sbjct: 597 EKRKARPAPEIKDIIKESQEEAGIMLDGKPLELTDKDIVEMVMFPVVNEACRVLAEKIVV 656
Query: 485 KAADLDIASVMGMGFPPYR 503
+A+DLDIASV GMGFPPYR
Sbjct: 657 QASDLDIASVFGMGFPPYR 675
>gi|357500631|ref|XP_003620604.1| Peroxisomal fatty acid beta-oxidation multifunctional protein
[Medicago truncatula]
gi|355495619|gb|AES76822.1| Peroxisomal fatty acid beta-oxidation multifunctional protein
[Medicago truncatula]
Length = 722
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 292/503 (58%), Positives = 384/503 (76%), Gaps = 2/503 (0%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKP+ EE LGL+DA+V+P +L+ +RQWAL+I E RRPW+ +L+ TDK+
Sbjct: 162 MMLTSKPITAEEGQKLGLIDAIVSPAELLKLSRQWALEIAEQRRPWIRSLHITDKLG--S 219
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ARE+ + AR +K AP+L CIDV+E G++ G +G+ +EAE F+KL+ SET K
Sbjct: 220 DAREVLRTARQHVKKTAPHLPQQQACIDVIEHGILHGGYSGVLREAEVFKKLVLSETAKG 279
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FFAQR SK+PGVTD+GL PR V+K A++GGGLMGSGIATALIL N VILKEVN
Sbjct: 280 LIHVFFAQRTISKIPGVTDIGLKPRNVRKAAVIGGGLMGSGIATALILGNIRVILKEVNS 339
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
++L+ GI + AN++ V + K+TQ+K E +SLL GVLDY FKDVDMVIEA+IE VSL
Sbjct: 340 EYLQKGIKTIEANVRGLVTRKKLTQQKAEGALSLLKGVLDYAEFKDVDMVIEAVIEKVSL 399
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF+DLEK CPPHCILASNTSTIDLN+IGE+ S+DR++GAHFFSPAH+MPLLEIVRT
Sbjct: 400 KQDIFSDLEKICPPHCILASNTSTIDLNIIGEKISSQDRVIGAHFFSPAHIMPLLEIVRT 459
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
N+TS QVI+DL+ +GK IKK+P+VVGNCTGFAVNR FFPY Q A L G D++ IDR
Sbjct: 460 NKTSAQVILDLVTVGKIIKKSPVVVGNCTGFAVNRTFFPYAQGAHFLANLGVDVFRIDRL 519
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+ FG+PMGPF+L DL G+GVA+A G +F +F RT+ + ++ ++ + R G+ KG+
Sbjct: 520 ISNFGLPMGPFQLQDLSGYGVAVAVGKEFAGSFAGRTFPTPLLDLLIKSGRNGKNNGKGY 579
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+Y++ K PDP V +E++R +S + + K +++++IVEMI FPVVNEACRV E
Sbjct: 580 YIYEKGSKPKPDPSVLPIVEESRRLSNIMPNGKPISITDQEIVEMILFPVVNEACRVLEE 639
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GI ++A+DLDIASV+GM FP YR
Sbjct: 640 GIVIRASDLDIASVLGMSFPSYR 662
>gi|406365505|gb|AFS41246.1| cinnamoyl-CoA hydratase-dehydrogenase [Petunia x hybrida]
Length = 724
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 293/503 (58%), Positives = 382/503 (75%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MM+TSKP+ EE LGL+DA+V ++L+ +RQWALDI E R+PW+ +L+KTDKI L
Sbjct: 162 MMMTSKPIMSEEGKKLGLIDAIVPSSELLKVSRQWALDIAERRKPWMRSLHKTDKIGSLS 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EARE+ K AR Q ++ A N+ + CIDV+E G++ G AG+ KEA+ F+ L+ SET K
Sbjct: 222 EAREVLKVARQQVKQTAKNMPQHVACIDVIEEGIIHGGYAGVLKEAKVFKDLVLSETSKG 281
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FFAQR TSKVP VTD+GL PR VKKVA++GGGLMGSGIATAL LSN V+LKE+N
Sbjct: 282 LVHVFFAQRATSKVPNVTDIGLKPRTVKKVAVIGGGLMGSGIATALALSNTFVVLKEINS 341
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
++L+ G+ + AN++ V + K+ Q+K +K +S++ G LDY FKDVDMVIEA+IE+V L
Sbjct: 342 EYLQKGMKAIEANVRGLVARKKLPQDKADKALSMVKGALDYSDFKDVDMVIEAVIESVPL 401
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IF+++EK CPPHCILASNTSTIDLN+IGE T SKDRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 402 KQKIFSEIEKVCPPHCILASNTSTIDLNIIGENTRSKDRIIGAHFFSPAHIMPLLEIVRT 461
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS Q I+DL+ +GK IKK P+VVGNCTGFAVNR FFPY+Q A +LV G D Y ID
Sbjct: 462 EKTSTQAILDLMAVGKAIKKVPVVVGNCTGFAVNRTFFPYSQGAHILVNLGVDAYRIDAQ 521
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
IT FG+PMGP +L DL G+GVA+A G +F F +RT+KS +I ++ + R G+ KGF
Sbjct: 522 ITSFGLPMGPLQLQDLTGYGVAVAVGKEFGSAFSDRTFKSPLIDLLIKSGRNGKNNGKGF 581
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+Y++ K PD V IE++R ++ + K +++++IVEMI FPVVNEACRV E
Sbjct: 582 YIYEKGSKPRPDLSVLPIIEESRRLTNIMPGGKPISVTDQEIVEMILFPVVNEACRVLDE 641
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GI V+A+DLD+ASV+GM FP YR
Sbjct: 642 GIVVRASDLDVASVLGMSFPSYR 664
>gi|224142159|ref|XP_002324426.1| predicted protein [Populus trichocarpa]
gi|222865860|gb|EEF02991.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 287/503 (57%), Positives = 390/503 (77%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML SKP+ EE LGL+DA+V +L+ +RQWALDI E R+PW+ +L++TDKI L
Sbjct: 162 IMLLSKPIMSEEGKKLGLIDAIVPSQELLKVSRQWALDISERRKPWLRSLHRTDKIGSLS 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EARE+ K AR QA+K APN+ +DV+E G++ G G+ KEA+ F++L+ +ET K
Sbjct: 222 EAREVLKAARQQAKKIAPNVPQHQALLDVMEEGIIHGGYNGVLKEAKVFKELVLTETSKG 281
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FFAQR TSK+P VTD+GL PR +KKVA++GGGLMGSGIATALI+SN V+LKE+N
Sbjct: 282 LVHVFFAQRMTSKIPKVTDVGLKPRHIKKVAVIGGGLMGSGIATALIVSNIHVVLKEINS 341
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
++L+ G + AN++S V +GK+T++K +K +S+L G LDY FKDVDMVIEA+IE+V L
Sbjct: 342 EYLQKGTKTIEANVRSLVTRGKLTRDKADKALSMLKGALDYSDFKDVDMVIEAVIESVPL 401
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IF+++EK CPPHCILA+NTSTIDLNL+GE+T S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 402 KQKIFSEIEKICPPHCILATNTSTIDLNLVGEKTSSQDRIIGAHFFSPAHIMPLLEIVRT 461
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS Q I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ+A +LV G D++ ID+
Sbjct: 462 EKTSAQAILDLMTVGKTIKKVPVVVGNCTGFAVNRAFFPYTQSALILVHLGVDVFRIDKL 521
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+ FG+PMGP++L DL G+GVA+A +F FP+RT++S +I ++ + R G+T KG+
Sbjct: 522 ISSFGLPMGPYQLQDLSGYGVALAVEKEFANAFPDRTFQSPLIHLLVKSGRNGKTNGKGY 581
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+Y++ K PDP V IE++R ++ + + K +++K+IVEM+ FPVVNEACRV E
Sbjct: 582 YIYEKGSKPRPDPSVLPIIEESRRLANIMPNGKPINITDKEIVEMVLFPVVNEACRVLDE 641
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+ V+A+DLD ASV+GM FP YR
Sbjct: 642 GVVVRASDLDTASVLGMSFPSYR 664
>gi|255546439|ref|XP_002514279.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
gi|223546735|gb|EEF48233.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
Length = 724
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 285/503 (56%), Positives = 387/503 (76%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKP+ EE LGLVD +V+ +L+ +RQWALDI E R+PW+ +L+ TDK+ L
Sbjct: 162 MMLTSKPIMSEEGKKLGLVDVIVSSQELLKVSRQWALDIKERRKPWMRSLHMTDKLGSLS 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EA E+ K AR QA+K APN+ C+DV+E GVV G +G+ KEA+ F++L+ S+T KS
Sbjct: 222 EALELLKAARQQAKKTAPNMPQHQACLDVIEDGVVHGGYSGVLKEAKVFKELVISDTAKS 281
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FFAQR TSKVP V+D+GL PR++KKVA++GGGLMGSGI TALI S V+LKE+N
Sbjct: 282 LIHVFFAQRTTSKVPNVSDIGLKPRQIKKVAVIGGGLMGSGIITALITSGIYVVLKEINS 341
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
++L GI V AN++ V +GK++ +K +K +S+L GVLDY F+DVDMVIEA+IE++ L
Sbjct: 342 EYLLKGIKMVEANVRGLVTRGKLSPDKADKALSMLKGVLDYSDFRDVDMVIEAVIESIPL 401
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IF+++EK CPPHCILA+NTSTIDLNL+G++T ++D I+GAHFFSPAH+MPLLEIVRT
Sbjct: 402 KQKIFSEIEKACPPHCILATNTSTIDLNLVGKKTSAQDCIIGAHFFSPAHIMPLLEIVRT 461
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TSPQ I+DL+ +GK IKK +VVGNCTGFAVNR FFPY Q A LLV G D++ IDR
Sbjct: 462 DKTSPQAILDLMTVGKSIKKVSVVVGNCTGFAVNRTFFPYAQGAHLLVNLGVDVFRIDRV 521
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I FG+PMGP +L DL G+GVA+A G +F FP+RT+KS ++ ++ + R G+ KG+
Sbjct: 522 ICNFGLPMGPLQLQDLAGYGVAVAVGKEFATAFPDRTFKSPLVDLLIKSGRNGKNNGKGY 581
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+Y++ K PDP V I++++ ++ + + K +S+++IVEMIFFP+VNEACRV E
Sbjct: 582 YIYEKGSKPKPDPSVIPIIQESQRLTNIMPNGKPISISDQEIVEMIFFPIVNEACRVLEE 641
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+ V+A+DLDIASV+GM FP YR
Sbjct: 642 GVVVRASDLDIASVLGMSFPSYR 664
>gi|449443155|ref|XP_004139346.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1-like [Cucumis sativus]
Length = 724
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 289/503 (57%), Positives = 380/503 (75%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + EE LGL+DAVV+PN+L+ AR+WALDI E R+PW+ TL++TD+I L
Sbjct: 162 MMLLSKTITSEEGEKLGLIDAVVSPNELMKVARKWALDIAERRKPWIRTLHRTDRIGSLA 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + K AR QA+K APN + CIDV+E G++ G +G+ KE + F++L+ ++T K
Sbjct: 222 EARSVLKSAREQAKKIAPNTPQQLACIDVIEDGIIHGGYSGVLKEDKVFRELVATDTAKG 281
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FF+QR SKVP VTD GL PR VKKVAI+GGGLMGSGIATA ILSN V++KE+N
Sbjct: 282 LVHVFFSQRLISKVPNVTDRGLKPRNVKKVAIIGGGLMGSGIATAFILSNIHVVVKEINP 341
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
++L+ GI + ANL+ V KGK+TQ+K K + +L G LDY FKDVDMVIEA +ENV L
Sbjct: 342 EYLQKGIKTIEANLRGLVVKGKLTQDKANKALLILKGSLDYSDFKDVDMVIEAAVENVPL 401
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IF+++EK CP HCILA+NTSTIDLNL+GE+T S DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 402 KQKIFSEIEKICPAHCILATNTSTIDLNLVGEKTRSMDRIIGAHFFSPAHVMPLLEIVRT 461
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQVI+DL+ +GK IKK P+VVGNCTGFAVNR FFPY QAA LLV G DL+ IDR
Sbjct: 462 EKTSPQVILDLMTVGKIIKKVPVVVGNCTGFAVNRTFFPYVQAAQLLVHLGVDLFRIDRV 521
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
IT FG+P+GPF+L DL G+GVA A G +F +FP+R S ++ +M+++ R G+ KG+
Sbjct: 522 ITNFGLPLGPFQLQDLSGYGVATAVGKEFSASFPDRVLFSPLVDLMRKNGRDGKNNGKGY 581
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+Y++ + PDP + +E+ R ++ + K +S++ I+EM+ FPVVNE CRV E
Sbjct: 582 YIYEKGSRPKPDPSIAPILEETRRIANLMPSGKPIAISDQQILEMVLFPVVNEGCRVVEE 641
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GI V+ +DL++A+V+GM FP YR
Sbjct: 642 GIVVRPSDLNVATVLGMSFPSYR 664
>gi|356520511|ref|XP_003528905.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1-like [Glycine max]
Length = 724
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 286/503 (56%), Positives = 381/503 (75%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKP+ EE GL+DA+V+ +L+ +R WAL+I E R+PW+ +L++TDKI L
Sbjct: 162 MMLTSKPITSEEGRKFGLIDAIVSSEELLKASRLWALEIGERRKPWIRSLHRTDKIGSLS 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + K AR Q +K AP+L C+DV+E G+V G +G+ KEAE F++L+ S+T K
Sbjct: 222 EARAVLKTARQQVKKTAPHLPQQQACVDVIEHGIVHGGYSGVLKEAEVFKQLVISDTSKG 281
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+++FFAQR SKVPGVTD+GL PR VKK A++GGGLMGSGIATALIL N VILKE+N
Sbjct: 282 LINVFFAQRAISKVPGVTDIGLKPRNVKKAAVIGGGLMGSGIATALILGNIRVILKEINS 341
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL GI + AN+ V++GK+T++K + +SLL GVLDY FKDVD+VIEA+IEN+SL
Sbjct: 342 EFLLKGIKTIEANVNGLVRRGKLTKQKADAALSLLKGVLDYSEFKDVDLVIEAVIENISL 401
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF DLEK CPPHCILASNTSTIDL+++G+ T S+DRI GAHFFSPAH+MPLLEI+RT
Sbjct: 402 KQTIFGDLEKICPPHCILASNTSTIDLDVVGKTTSSQDRIAGAHFFSPAHIMPLLEIIRT 461
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TS QVIVDL+ +GK IKK P+VVGNCTGFAVN+ FFPY+Q A LLV G D++ IDR
Sbjct: 462 DKTSAQVIVDLITVGKIIKKAPVVVGNCTGFAVNKTFFPYSQGAHLLVNLGVDVFRIDRL 521
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I FG P+GPF+L DL G+GVA+AT F + F +R +KS ++ ++ + R G+ KG+
Sbjct: 522 ICNFGFPIGPFQLQDLAGYGVAVATSKVFADAFSDRIFKSPLLDLLIKSGRNGKNNGKGY 581
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+Y++ K PDP + IE++R + + + K +++++IVEMI FPVVNEACRV +
Sbjct: 582 YIYEKGGKPKPDPSILPIIEESRRLCNIMPNGKPISITDQEIVEMILFPVVNEACRVLED 641
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+ ++A+DLDIASV+GM FP YR
Sbjct: 642 GVVIRASDLDIASVLGMSFPNYR 664
>gi|449472180|ref|XP_004153517.1| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal fatty acid
beta-oxidation multifunctional protein MFP-a-like,
partial [Cucumis sativus]
Length = 350
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 286/350 (81%), Positives = 326/350 (93%)
Query: 104 KEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA 163
+E EDFQ LL ++T KSL+H+FFAQRGT+KVPGV+DLGL PRR+ KVA++GGGLMGSGIA
Sbjct: 1 QEIEDFQVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIA 60
Query: 164 TALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYES 223
TALILSNY VILKEVNEKFLEAG+GRV+ANLQSRV+KG MT EKFE+TISLL GVLDYES
Sbjct: 61 TALILSNYHVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYES 120
Query: 224 FKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGA 283
FKDVDMVIEA+IEN+SLKQQI DLEKYCPPHCILA+NTSTIDL+LIGE+T S DRIVGA
Sbjct: 121 FKDVDMVIEAVIENISLKQQIIVDLEKYCPPHCILATNTSTIDLDLIGEKTNSHDRIVGA 180
Query: 284 HFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQA 343
HFFSPAHVMPLLE+VRTN+T+PQVIVDL+D+GK+IKKTP+VVGNCTGFAVNR+FFPYTQA
Sbjct: 181 HFFSPAHVMPLLEVVRTNRTAPQVIVDLVDVGKRIKKTPVVVGNCTGFAVNRIFFPYTQA 240
Query: 344 AFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMII 403
A LLVE G D Y IDRAI KFGMPMGPFRL DLVGFGVAIATG QF++NFP+RT+KSMII
Sbjct: 241 ALLLVEHGVDPYQIDRAIYKFGMPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMII 300
Query: 404 PIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPK 453
P+MQEDKRAGETT+KGFYLYD+ RK+ PDPE+KK+IEKARSMSG+++DPK
Sbjct: 301 PLMQEDKRAGETTQKGFYLYDKNRKSKPDPELKKYIEKARSMSGISVDPK 350
>gi|225445200|ref|XP_002284283.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1 [Vitis vinifera]
gi|297738804|emb|CBI28049.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 285/503 (56%), Positives = 380/503 (75%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MM SK + EE + LGLVDA+V+ +L+ +R+WALDI++ R+PWV +L++T+K+ +
Sbjct: 162 MMRLSKSISSEEGYKLGLVDAIVSSEELLKVSRRWALDIVDKRKPWVRSLHQTEKLGSVS 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EA +I K +R QARK P+L C+DV+E G+V G +GL KE + F KL+ S+T K
Sbjct: 222 EALDILKISRQQARKTVPHLPQHQACLDVIEEGIVHGGYSGLLKETKVFNKLVLSDTAKG 281
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FFAQR TSKVP VTD+GL PR VKKVA++GGGLMGSGIATALI SN V+LKEVN
Sbjct: 282 LIHVFFAQRATSKVPNVTDIGLKPRNVKKVAVIGGGLMGSGIATALITSNIYVVLKEVNS 341
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
++L GI + AN++ V KGK+TQ+K K +S+L GVLDY FKD+DMVIEA+IEN+SL
Sbjct: 342 EYLLKGIKTIEANVRGLVTKGKLTQDKARKALSMLKGVLDYSEFKDIDMVIEAVIENISL 401
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IF+++EK C PHCILA+NTSTIDLNL+GE+T S+DRI+GAHFFSPAHVMPLLE+VRT
Sbjct: 402 KQKIFSEIEKICSPHCILATNTSTIDLNLVGEKTSSQDRIIGAHFFSPAHVMPLLEVVRT 461
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS QVI+DL+ +GK IKK P+VVG+CTGFAVNR FFPY Q A LV G D + ID
Sbjct: 462 EKTSAQVILDLMTVGKAIKKIPVVVGSCTGFAVNRTFFPYAQGAHFLVNLGVDPFRIDWV 521
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+ FG+PMGPF+L DL G+GVA+A G +F F RT++S ++ ++ ++ R G+ KG+
Sbjct: 522 ISNFGLPMGPFQLQDLSGYGVAVAVGKEFATAFQGRTFESPLVNLLLKNGRNGKQNGKGY 581
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+Y++ K PDP V IE++R ++ + K ++ ++I+EMI FPVVNEACRV E
Sbjct: 582 YIYEKGSKPRPDPSVLPIIEESRRLANIMPGGKPISVANQEILEMILFPVVNEACRVLDE 641
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+ V+A+DLDI SV+GM FP YR
Sbjct: 642 GVVVRASDLDITSVLGMSFPSYR 664
>gi|326524910|dbj|BAK04391.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525701|dbj|BAJ88897.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 728
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 290/533 (54%), Positives = 384/533 (72%), Gaps = 10/533 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + +E GL+DA+ +P++L+ +R WAL+I HR+PW+ +L +TD++ L
Sbjct: 165 MMLQSKFITAKEGKERGLIDALCSPDELIKMSRFWALEIANHRKPWIRSLGRTDRLGSLS 224
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + AR QA K A N+ C+DV+E GV+ G AG+ KEA+ F++L+ S T ++
Sbjct: 225 EARAVLSMARQQANKAAANMPQHQACLDVIEEGVLYGGHAGVVKEAKVFKELVVSTTSRA 284
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FFAQR T+KVPGVTD+ L PR ++KVA++GGGLMGSGIATAL++ N V+LKEVN
Sbjct: 285 LVHVFFAQRSTTKVPGVTDIQLKPRNIRKVAVIGGGLMGSGIATALLVGNISVVLKEVNP 344
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+ G + NL+ VK+G +T++K K ISLL G LDY FKDVDMVIEA+IE V L
Sbjct: 345 QFLQRGQKTIAGNLEGLVKRGSLTKDKMSKAISLLKGALDYSDFKDVDMVIEAVIEKVPL 404
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IFAD+EK CPPHCILA+NTSTIDLN++GE+T S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 405 KQSIFADIEKICPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 464
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQ I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ A LLV G DL+ IDR
Sbjct: 465 EKTSPQAILDLITVGKIIKKVPVVVGNCTGFAVNRTFFPYTQGAQLLVSLGIDLFRIDRI 524
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+ FGMPMGPF+L DL G+GVA+A + F R + S+++ +M E R G++ KG+
Sbjct: 525 ISNFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNFDSVLVDLMAETGRQGKSNGKGY 584
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLY++ + PDP V+ I++ R + K LS++DI+EM+FFPVVNEACRV E
Sbjct: 585 YLYEKGARPKPDPSVQNVIDEYRRQAKTMPGGKPVTLSDQDILEMVFFPVVNEACRVMDE 644
Query: 481 GIAVKAADLDIASVMGMGFPPYR----------FVTFIHRGFSKSSSCFKNLL 523
+ ++AADLDIASV+GMGFP YR ++IH SK + + +
Sbjct: 645 NVVIRAADLDIASVLGMGFPKYRGGLIFWADTVGASYIHSKLSKWAEMYGDFF 697
>gi|15235527|ref|NP_194630.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
thaliana]
gi|75315624|sp|Q9ZPI6.1|AIM1_ARATH RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1; AltName: Full=Protein ABNORMAL
INFLORESCENCE MERISTEM 1; Short=AtAIM1; Includes:
RecName: Full=Enoyl-CoA hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|4337025|gb|AAD18041.1| AIM1 protein [Arabidopsis thaliana]
gi|4972047|emb|CAB43915.1| AIM1 protein [Arabidopsis thaliana]
gi|7269799|emb|CAB79659.1| AIM1 protein [Arabidopsis thaliana]
gi|16648891|gb|AAL24297.1| AIM1 protein [Arabidopsis thaliana]
gi|18175606|gb|AAL59895.1| putative AIM1 protein [Arabidopsis thaliana]
gi|20465649|gb|AAM20293.1| putative AIM1 protein [Arabidopsis thaliana]
gi|332660172|gb|AEE85572.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
thaliana]
Length = 721
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 286/503 (56%), Positives = 379/503 (75%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L SK + EE H LGL+DA+V P ++ST+R+WALDI E R+P++ +L++TDKI L
Sbjct: 163 MILLSKSISSEEGHKLGLIDALVPPGDVLSTSRKWALDIAEGRKPFLQSLHRTDKIGSLS 222
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR I K +R A+K APN+ CI+V+E G++ G +G+ KEAE F++L+ S+T K
Sbjct: 223 EARAILKNSRQLAKKIAPNMPQHHACIEVIEEGIIHGGYSGVLKEAEVFKQLVLSDTAKG 282
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FFAQR TSKVP VTD+GL PR +KKVA++GGGLMGSGIATAL+LSN V+LKE+N
Sbjct: 283 LVHVFFAQRATSKVPNVTDVGLKPRPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINS 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL GI V AN++S V +GK+TQ+K K +SL GVLDY F DVDMVIEA+IEN+ L
Sbjct: 343 EFLMKGIKSVEANMKSLVSRGKLTQDKAGKALSLFKGVLDYTEFNDVDMVIEAVIENIQL 402
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF ++EK C PHCILASNTSTIDL++IGE+T SKDRIVGAHFFSPAH+MPLLEIVR+
Sbjct: 403 KQNIFKEIEKVCSPHCILASNTSTIDLDVIGEKTNSKDRIVGAHFFSPAHLMPLLEIVRS 462
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TS QVI+DL+ +GK IKK P+VVGNC GFAVNR FFPY+QAA +L G DL+ ID
Sbjct: 463 KNTSAQVILDLMAVGKAIKKVPVVVGNCIGFAVNRTFFPYSQAAHMLANLGVDLFRIDSV 522
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
IT FG+P+GPF+L DL G G+ +A G + + + +R ++S + ++ + R G+ +G+
Sbjct: 523 ITSFGLPLGPFQLGDLAGHGIGLAVGPIYAKVYGDRMFRSPMTELLLKSGRNGKINGRGY 582
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+Y++ K PDP V +EK+R ++ + K +++K+IVEMI FPVVNEACRV E
Sbjct: 583 YIYEKGSKPKPDPSVLSIVEKSRKLTNIMPGGKPISVTDKEIVEMILFPVVNEACRVLDE 642
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+ ++A+DLDIASV+GM FP YR
Sbjct: 643 GVVIRASDLDIASVLGMSFPSYR 665
>gi|356531273|ref|XP_003534202.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1-like [Glycine max]
Length = 724
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 283/503 (56%), Positives = 384/503 (76%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKP+ EE LGL+DA+V+ +L++ +R WAL+I E +PWV +L++TDKI L
Sbjct: 162 MMLTSKPITSEEGRKLGLIDAIVSSEELLNASRLWALEIGERCKPWVRSLHRTDKIGSLS 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EARE+ + AR Q +K P+L + C+DV+E G+V G +G+ KEAE F++L+ S+T K
Sbjct: 222 EAREVLRTARQQVKKTVPHLPQQLACVDVIEHGIVHGGYSGVLKEAEVFKQLVVSDTAKG 281
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+++FF+QR SKVPGVTD+GL PR VKK A++GGGLMGSGIATALIL N VILKE+N
Sbjct: 282 LINVFFSQRAISKVPGVTDIGLKPRNVKKAAVIGGGLMGSGIATALILGNIHVILKEINP 341
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL GI + AN+ V++GK+T++K + +SLL GVLDY FKDVD+VIEA+IEN+SL
Sbjct: 342 EFLLKGIKTIEANVNGLVRRGKLTKQKADAALSLLRGVLDYSEFKDVDLVIEAVIENISL 401
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF+DLEK CPPHCILASNTSTIDL+++G+ T S++RI GAHFFSPAH+MPLLEI+RT
Sbjct: 402 KQTIFSDLEKICPPHCILASNTSTIDLDVVGKTTSSQNRIAGAHFFSPAHIMPLLEIIRT 461
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TS QVI+DL+ +GK IKKTP+VVGNCTGFAVN+ FFPY+Q A LLV G D++ ID
Sbjct: 462 DKTSAQVILDLITVGKIIKKTPVVVGNCTGFAVNKTFFPYSQGAHLLVNLGVDVFRIDTL 521
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I FG P+GPF+L DL G+GVA+AT F + F +R +KS ++ ++ + R G+ KG+
Sbjct: 522 IRNFGFPIGPFQLQDLAGYGVAVATSKVFADAFSDRIFKSPLLDLLIKSGRNGKNNGKGY 581
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+Y++ K PDP + IE++R + + + K +++++IVEMI FPVVNEACRV +
Sbjct: 582 YIYEKAGKPKPDPSILPIIEESRRLCNIMPNGKPISVTDQEIVEMILFPVVNEACRVLED 641
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+ ++A+DLDIASV+GM FP YR
Sbjct: 642 GVVIRASDLDIASVLGMSFPNYR 664
>gi|326506022|dbj|BAJ91250.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 692
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 290/533 (54%), Positives = 384/533 (72%), Gaps = 10/533 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + +E GL+DA+ +P++L+ +R WAL+I HR+PW+ +L +TD++ L
Sbjct: 129 MMLQSKFITAKEGKERGLIDALCSPDELIKMSRFWALEIANHRKPWIRSLGRTDRLGSLS 188
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + AR QA K A N+ C+DV+E GV+ G AG+ KEA+ F++L+ S T ++
Sbjct: 189 EARAVLSMARQQANKAAANMPQHQACLDVIEEGVLYGGHAGVVKEAKVFKELVVSTTSRA 248
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FFAQR T+KVPGVTD+ L PR ++KVA++GGGLMGSGIATAL++ N V+LKEVN
Sbjct: 249 LVHVFFAQRSTTKVPGVTDIQLKPRNIRKVAVIGGGLMGSGIATALLVGNISVVLKEVNP 308
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+ G + NL+ VK+G +T++K K ISLL G LDY FKDVDMVIEA+IE V L
Sbjct: 309 QFLQRGQKTIAGNLEGLVKRGSLTKDKMSKAISLLKGALDYSDFKDVDMVIEAVIEKVPL 368
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IFAD+EK CPPHCILA+NTSTIDLN++GE+T S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 369 KQSIFADIEKICPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 428
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQ I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ A LLV G DL+ IDR
Sbjct: 429 EKTSPQAILDLITVGKIIKKVPVVVGNCTGFAVNRTFFPYTQGAQLLVSLGIDLFRIDRI 488
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+ FGMPMGPF+L DL G+GVA+A + F R + S+++ +M E R G++ KG+
Sbjct: 489 ISNFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNFDSVLVDLMAETGRQGKSNGKGY 548
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLY++ + PDP V+ I++ R + K LS++DI+EM+FFPVVNEACRV E
Sbjct: 549 YLYEKGARPKPDPSVQNVIDEYRRQAKTMPGGKPVTLSDQDILEMVFFPVVNEACRVMDE 608
Query: 481 GIAVKAADLDIASVMGMGFPPYR----------FVTFIHRGFSKSSSCFKNLL 523
+ ++AADLDIASV+GMGFP YR ++IH SK + + +
Sbjct: 609 NVVIRAADLDIASVLGMGFPKYRGGLIFWADTVGASYIHSKLSKWAEMYGDFF 661
>gi|326525937|dbj|BAJ93145.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 728
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 289/533 (54%), Positives = 383/533 (71%), Gaps = 10/533 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + +E GL+DA+ +P++L+ +R WAL+I HR+PW+ +L +TD++ L
Sbjct: 165 MMLQSKFITAKEGKERGLIDALCSPDELIKMSRFWALEIANHRKPWIRSLGRTDRLGSLS 224
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + AR QA K A N+ C+DV+E GV+ G AG+ KEA+ F++L+ S T ++
Sbjct: 225 EARAVLSMARQQANKAAANMPQHQACLDVIEEGVLYGGHAGVVKEAKVFKELVVSTTSRA 284
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FFAQR T+KVPGVTD+ L PR ++KVA++GGGLMGSGIATAL++ N V+LKEVN
Sbjct: 285 LVHVFFAQRSTTKVPGVTDIQLKPRNIRKVAVIGGGLMGSGIATALLVGNISVVLKEVNP 344
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+ G + NL+ VK+G +T++K K ISLL G LDY FKDVDMVIEA+IE V L
Sbjct: 345 QFLQRGQKTIAGNLEGLVKRGSLTKDKMSKAISLLKGALDYSDFKDVDMVIEAVIEKVPL 404
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IFAD+EK CPPHCILA+NTSTID N++GE+T S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 405 KQSIFADIEKICPPHCILATNTSTIDSNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 464
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQ I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ A LLV G DL+ IDR
Sbjct: 465 EKTSPQAILDLITVGKIIKKVPVVVGNCTGFAVNRTFFPYTQGAQLLVSLGIDLFRIDRI 524
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+ FGMPMGPF+L DL G+GVA+A + F R + S+++ +M E R G++ KG+
Sbjct: 525 ISNFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNFDSVLVDLMAETGRQGKSNGKGY 584
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLY++ + PDP V+ I++ R + K LS++DI+EM+FFPVVNEACRV E
Sbjct: 585 YLYEKGARPKPDPSVQNVIDEYRRQAKTMPGGKPVTLSDQDILEMVFFPVVNEACRVMDE 644
Query: 481 GIAVKAADLDIASVMGMGFPPYR----------FVTFIHRGFSKSSSCFKNLL 523
+ ++AADLDIASV+GMGFP YR ++IH SK + + +
Sbjct: 645 NVVIRAADLDIASVLGMGFPKYRGGLIFWADTVGASYIHSKLSKWAEMYGDFF 697
>gi|307103971|gb|EFN52227.1| hypothetical protein CHLNCDRAFT_59763 [Chlorella variabilis]
Length = 723
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 295/504 (58%), Positives = 379/504 (75%), Gaps = 1/504 (0%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTS P+K A LGL D VV P QL+ A++ A DI +R V TLY+TDK+EPLG
Sbjct: 159 MMLTSTPIKDRAARELGLADEVVPPGQLLEVAKRVAFDIAAGKRARVQTLYRTDKLEPLG 218
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EA I +FAR+QA K+A +L HP++C+D ++ G+ G RAGLQKE E F +T K+
Sbjct: 219 EALAILQFARSQAAKRARHLMHPLLCLDAIQYGIEHGGRAGLQKEGECFGAAAALDTHKA 278
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVHIFFAQR T K+ GVTD GL PR +K+VA+LGGGLMGSGIATA +L+ V+LKEVN+
Sbjct: 279 LVHIFFAQRSTKKIRGVTDTGLRPRPIKRVAVLGGGLMGSGIATACVLAGVEVLLKEVNQ 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AG+GR+++NL SRVKKG+MT++ + +S + G LDY F VDMVIEA IE+V L
Sbjct: 339 KFLDAGMGRIQSNLASRVKKGRMTEQMAQAAMSRVQGALDYSGFGSVDMVIEAAIEDVGL 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IFA+LE+ C ILA+NTSTI++ L+G +T DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 399 KQEIFAELERSCRKDAILATNTSTINIELVGAKTSCADRILGAHFFSPAHVMPLLEIVRT 458
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+QTS QVI+D L++ KIKKTP+VVGNCTGFAVNR+FFPYTQAA +LV+ G D Y ID+
Sbjct: 459 DQTSKQVILDTLELSTKIKKTPVVVGNCTGFAVNRVFFPYTQAACMLVDMGLDPYRIDKI 518
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I FGMPMGPFRL+DLVG + + G F+E+F +R Y + II ++ E+KR GE + +GF
Sbjct: 519 IAGFGMPMGPFRLSDLVGADIGLHVGKNFLESFSKRCYPARIIQLLNENKRLGEKSGRGF 578
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAID-PKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y YD RR+ASPDP++ ++++R +G+ D K++++DIVE IFFPVVNE CRV
Sbjct: 579 YKYDARRRASPDPDLAPLVQQSRKGAGLYQDGAPPPKMNDQDIVEFIFFPVVNEGCRVID 638
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGI K ADLD+A VMGMGFP +R
Sbjct: 639 EGIVDKPADLDVAMVMGMGFPAFR 662
>gi|449515444|ref|XP_004164759.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1-like [Cucumis sativus]
Length = 719
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 285/503 (56%), Positives = 375/503 (74%), Gaps = 5/503 (0%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + EE LGL+DAVV+PN+L+ AR+WALDI E R+PW+ TL++TD+I L
Sbjct: 162 MMLLSKTITSEEGEKLGLIDAVVSPNELMKVARKWALDIAERRKPWIRTLHRTDRIGSLA 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + K AR QA+K APN + CIDV+E G++ G +G+ KE + F++L+ ++T K
Sbjct: 222 EARSVLKSAREQAKKIAPNTPQQLACIDVIEDGIIHGGYSGVLKEDKVFRELVATDTAKG 281
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FF VP VTD GL PR VKKVAI+GGGLMGSGIATA ILSN V++KE+N
Sbjct: 282 LVHVFFPS-----VPNVTDRGLKPRNVKKVAIIGGGLMGSGIATAFILSNIHVVVKEINP 336
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
++L+ GI + ANL+ V KGK+TQ+K K + +L G LDY FKDVDMVIEA +ENV L
Sbjct: 337 EYLQKGIKTIEANLRGLVVKGKLTQDKANKALLILKGSLDYSDFKDVDMVIEAAVENVPL 396
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IF+++EK CP HCILA+NTSTIDLNL+GE+T S DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 397 KQKIFSEIEKICPAHCILATNTSTIDLNLVGEKTRSMDRIIGAHFFSPAHVMPLLEIVRT 456
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQVI+DL+ +GK IKK P+VVGNCTGFAVNR FFPY QAA LLV G DL+ IDR
Sbjct: 457 EKTSPQVILDLMTVGKIIKKVPVVVGNCTGFAVNRTFFPYVQAAQLLVHLGVDLFRIDRV 516
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
IT FG+P+GPF+L DL G+GVA A G +F +FP+R S ++ +M+++ R G+ KG+
Sbjct: 517 ITNFGLPLGPFQLQDLSGYGVATAVGKEFSASFPDRVLFSPLVDLMRKNGRDGKNNGKGY 576
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+Y++ + PDP + +E+ R ++ + K +S++ I+EM+ FPVVNE CRV E
Sbjct: 577 YIYEKGSRPKPDPSIAPILEETRRIANLMPSGKPIAISDQQILEMVLFPVVNEGCRVVEE 636
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GI V+ +DL++A+V+GM FP YR
Sbjct: 637 GIVVRPSDLNVATVLGMSFPSYR 659
>gi|357141979|ref|XP_003572416.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein-like [Brachypodium distachyon]
Length = 726
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 285/503 (56%), Positives = 375/503 (74%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + +E G VDA+ +P++L+ +R WAL+I R+PW+ +L +TD++ L
Sbjct: 163 MMLQSKFITAKEGKERGFVDALCSPDELIKLSRFWALEIANCRKPWIRSLGRTDRLGSLS 222
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + AR QA+K A N+ C+DV+E GVV G AG+ KEA+ F++L+ S T K+
Sbjct: 223 EARAVLNMAREQAKKVALNMPQHQACLDVIEEGVVFGGHAGVVKEAKVFKELVLSTTSKA 282
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FFAQR T+KVPGVTD+ + PR++KKVA++GGGLMGSGIATAL++ N V+LKEVN
Sbjct: 283 LVHVFFAQRSTTKVPGVTDIQIKPRQIKKVAVIGGGLMGSGIATALLVGNISVVLKEVNP 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+ G + NL+ VK+G +T++K K ISLL G LDY FKDVDMVIEA+IE + L
Sbjct: 343 QFLKRGQNTIAGNLEGLVKRGSLTKDKMNKAISLLKGALDYSDFKDVDMVIEAVIEKIPL 402
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IFAD+EK CPPHCILA+NTSTIDLN++GE+T S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 403 KQSIFADIEKICPPHCILATNTSTIDLNVVGEKTKSQDRIIGAHFFSPAHIMPLLEIVRT 462
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQ I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ + LLV G DL+ IDR
Sbjct: 463 EKTSPQAILDLITVGKIIKKVPVVVGNCTGFAVNRTFFPYTQGSQLLVSLGIDLFRIDRV 522
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+ FGMP+GPF+L D+ G+GVA+A + F R + S ++ +M ED R G+ KG+
Sbjct: 523 ISSFGMPLGPFQLQDVAGYGVALAVKDIYAAAFGTRNFDSDLVVLMAEDGRQGKINGKGY 582
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLY++ K PDP V+ I++ R + D K LS++DI+EM+FFPVVNEACRV E
Sbjct: 583 YLYEKGGKPKPDPSVQHVIDEYRKRAKTMPDGKPVTLSDQDILEMVFFPVVNEACRVMDE 642
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
+ ++A+DLDIASV+GMGFP YR
Sbjct: 643 NVVIRASDLDIASVLGMGFPKYR 665
>gi|384245449|gb|EIE18943.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
protein [Coccomyxa subellipsoidea C-169]
Length = 732
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 298/514 (57%), Positives = 376/514 (73%), Gaps = 11/514 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTS P+ ++A LGLVD VV +L++ AR WA +I +P +LY+TDK+E LG
Sbjct: 158 MMLTSAPINDKKAAKLGLVDGVVPKEKLLAAARAWASEIAAGTKPRNFSLYRTDKLESLG 217
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQK----------EAEDFQ 110
EA I +FARA+ +K+AP+LTHP++C+D + G+ G AGL++ E+ F
Sbjct: 218 EALPILEFARAETQKRAPHLTHPLLCLDAIRVGIEEGGLAGLKQARICTPNFCAESVAFN 277
Query: 111 KLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSN 170
K +T K+LVHIFFAQR T KV G+TD GL PRR+KK+A+LGGGLMGSGIATA L+
Sbjct: 278 KAASLDTHKALVHIFFAQRATKKVKGITDGGLKPRRIKKIAVLGGGLMGSGIATASALAG 337
Query: 171 YPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMV 230
VI+KEVN+KFLE G+ R+++NL SRVKKGKMTQE + + + G LDY F VDMV
Sbjct: 338 IEVIVKEVNQKFLEGGMARIKSNLASRVKKGKMTQEAADAVFARVKGALDYNDFASVDMV 397
Query: 231 IEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAH 290
IEA+IE+V LKQ+IFADLE+ C P IL+SNTSTID++LIG +T + +RIVGAHFFSPAH
Sbjct: 398 IEAVIEDVGLKQRIFADLERVCRPDAILSSNTSTIDISLIGAKTRAAERIVGAHFFSPAH 457
Query: 291 VMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVER 350
+MPLLEIVRT++TSPQVI+D L+ G IKKTP+VVGNCTGFAVNR+FFPYTQAA LLV+
Sbjct: 458 IMPLLEIVRTDKTSPQVILDTLEYGSAIKKTPVVVGNCTGFAVNRVFFPYTQAACLLVDM 517
Query: 351 GTDLYLIDRAI-TKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQED 409
G D Y ID AI FGMPMGPFRL+DLVG + + G F+++FPERTY + +I + E
Sbjct: 518 GLDPYKIDMAIFAGFGMPMGPFRLSDLVGADIGLHVGKNFLDSFPERTYPAHLIVKLNEA 577
Query: 410 KRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
KR GE T GFY YD RRKA PDP + +E +R +G+ K +S +DI+E IFFP
Sbjct: 578 KRLGEKTGSGFYAYDARRKAKPDPSLAPIVEASRKAAGLYKGGKPPPMSPQDIIEFIFFP 637
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
VVNE CRV AEGI K ADLD+A+V+ MGFP YR
Sbjct: 638 VVNEGCRVIAEGIVDKPADLDVATVLSMGFPAYR 671
>gi|33338559|gb|AAQ13901.1| multifunctional protein [Oryza sativa]
Length = 718
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 288/533 (54%), Positives = 385/533 (72%), Gaps = 10/533 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + +E GLVDA+ +P++L+ +R WAL+I +R+PW+ +L +TD++ L
Sbjct: 155 MMLQSKFITAKEGKERGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLS 214
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + AR QA+K A NL C+DV+E GV+ G AG+ KEA+ F++L+ S T K+
Sbjct: 215 EARSVLNSARQQAKKVAANLPQHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKA 274
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR T+KVPGVTD+ L PR+++KVA++GGGLMGSGIATAL++SN V+LKEVN
Sbjct: 275 LVHAFFAQRLTTKVPGVTDVQLKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNP 334
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+ G + ANL+ VK+G +T++K K +SLL G LDY FKDVDMVIEA+IE + L
Sbjct: 335 QFLQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPL 394
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF+DLEK CPPHCILA+NTSTIDLN++GE+T S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 395 KQSIFSDLEKVCPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 454
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQ I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ + LLV G D++ IDR
Sbjct: 455 EKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRV 514
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+ FGMPMGPF+L DL G+GVA+A + F R S ++ +M ++ R G++ KG+
Sbjct: 515 ISSFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGY 574
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLY++ K PDP V+ I++ R + K LS++DI+EMIFFPVVNEACRV E
Sbjct: 575 YLYEKGGKPKPDPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDE 634
Query: 481 GIAVKAADLDIASVMGMGFPPYR----------FVTFIHRGFSKSSSCFKNLL 523
+ ++A+DLDIAS++GMGFP +R +IH SK + + +
Sbjct: 635 NVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGDFF 687
>gi|115445513|ref|NP_001046536.1| Os02g0274100 [Oryza sativa Japonica Group]
gi|116257652|sp|Q8W1L6.2|MFP_ORYSJ RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional
protein; Short=MFP; Includes: RecName: Full=Enoyl-CoA
hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|47848048|dbj|BAD21833.1| Peroxisomal fatty acid beta-oxidation multifunctional protein
[Oryza sativa Japonica Group]
gi|113536067|dbj|BAF08450.1| Os02g0274100 [Oryza sativa Japonica Group]
Length = 726
Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust.
Identities = 288/533 (54%), Positives = 385/533 (72%), Gaps = 10/533 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + +E GLVDA+ +P++L+ +R WAL+I +R+PW+ +L +TD++ L
Sbjct: 163 MMLQSKFITAKEGKEGGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLS 222
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + AR QA+K A NL C+DV+E GV+ G AG+ KEA+ F++L+ S T K+
Sbjct: 223 EARSVLNSARQQAKKVAANLPQHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKA 282
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR T+KVPGVTD+ L PR+++KVA++GGGLMGSGIATAL++SN V+LKEVN
Sbjct: 283 LVHAFFAQRLTTKVPGVTDVQLKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNP 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+ G + ANL+ VK+G +T++K K +SLL G LDY FKDVDMVIEA+IE + L
Sbjct: 343 QFLQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPL 402
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF+DLEK CPPHCILA+NTSTIDLN++GE+T S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 403 KQSIFSDLEKVCPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 462
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQ I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ + LLV G D++ IDR
Sbjct: 463 EKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRV 522
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+ FGMPMGPF+L DL G+GVA+A + F R S ++ +M ++ R G++ KG+
Sbjct: 523 ISSFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGY 582
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLY++ K PDP V+ I++ R + K LS++DI+EMIFFPVVNEACRV E
Sbjct: 583 YLYEKGGKPKPDPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDE 642
Query: 481 GIAVKAADLDIASVMGMGFPPYR----------FVTFIHRGFSKSSSCFKNLL 523
+ ++A+DLDIAS++GMGFP +R +IH SK + + +
Sbjct: 643 NVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGDFF 695
>gi|218190472|gb|EEC72899.1| hypothetical protein OsI_06722 [Oryza sativa Indica Group]
Length = 726
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 288/533 (54%), Positives = 385/533 (72%), Gaps = 10/533 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + +E GLVDA+ +P++L+ +R WAL+I +R+PW+ +L +TD++ L
Sbjct: 163 MMLQSKFITAKEGKERGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLS 222
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + AR QA+K A NL C+DV+E GV+ G AG+ KEA+ F++L+ S T K+
Sbjct: 223 EARSVINSARQQAKKVAANLPQHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKA 282
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR T+KVPGVTD+ L PR+++KVA++GGGLMGSGIATAL++SN V+LKEVN
Sbjct: 283 LVHAFFAQRLTTKVPGVTDVQLKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNP 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+ G + ANL+ VK+G +T++K K +SLL G LDY FKDVDMVIEA+IE + L
Sbjct: 343 QFLQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPL 402
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF+DLEK CPPHCILA+NTSTIDLN++GE+T S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 403 KQSIFSDLEKVCPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 462
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQ I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ + LLV G D++ IDR
Sbjct: 463 EKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRV 522
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+ FGMPMGPF+L DL G+GVA+A + F R S ++ +M ++ R G++ KG+
Sbjct: 523 ISSFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGY 582
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLY++ K PDP V+ I++ R + K LS++DI+EMIFFPVVNEACRV E
Sbjct: 583 YLYEKGGKPKPDPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDE 642
Query: 481 GIAVKAADLDIASVMGMGFPPYR----------FVTFIHRGFSKSSSCFKNLL 523
+ ++A+DLDIAS++GMGFP +R +IH SK + + +
Sbjct: 643 NVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGDFF 695
>gi|297799088|ref|XP_002867428.1| hypothetical protein ARALYDRAFT_491857 [Arabidopsis lyrata subsp.
lyrata]
gi|297313264|gb|EFH43687.1| hypothetical protein ARALYDRAFT_491857 [Arabidopsis lyrata subsp.
lyrata]
Length = 721
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/503 (56%), Positives = 375/503 (74%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L SK + EE LGL+DA+V P ++ST+R+WALDI + R+P++ +L++TDKI L
Sbjct: 163 MILLSKSISSEEGQKLGLIDALVPPGDVLSTSRKWALDIADGRKPFLRSLHRTDKIGSLS 222
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR I K +R A+K APN+ CI+V+E G+V G +G+ KEAE F++L+ S+T K
Sbjct: 223 EARAILKNSRQLAKKVAPNMPQHHACIEVIEEGIVHGGYSGVLKEAEVFKQLVLSDTAKG 282
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FFAQR TSKVP VTD+GL PR +KKVA++GGGLMGSGI TAL+LSN V+LKE+N
Sbjct: 283 LVHVFFAQRATSKVPNVTDVGLKPRPIKKVAVIGGGLMGSGITTALLLSNIRVVLKEINS 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
++L G V AN++ V +GK+TQ+K K +SL GVLDY FKDVDMVIEA+IEN+ L
Sbjct: 343 EYLMKGTKSVEANIKGLVSRGKLTQDKAGKALSLFKGVLDYTEFKDVDMVIEAVIENIQL 402
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF ++EK C PHCILASNTSTIDL++IGE+T SKDRIVGAHFFSPAH+M LLEIVR+
Sbjct: 403 KQNIFKEIEKVCSPHCILASNTSTIDLDVIGEKTNSKDRIVGAHFFSPAHLMTLLEIVRS 462
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TS QVI+DL+ +GK IKK P+VVGNC GFAVNR FFPYTQAA +L G DL+ ID
Sbjct: 463 KNTSAQVILDLMAVGKAIKKVPVVVGNCIGFAVNRTFFPYTQAAHMLANLGVDLFRIDSV 522
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
IT FG+P+GPF+L DL G G+ +A G + + + +R ++S + ++ + R G+ KG+
Sbjct: 523 ITSFGLPLGPFQLGDLAGHGIGLAVGPIYAKVYGDRMFRSPMTELLLKSGRNGKINGKGY 582
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+Y++ K PDP V +E++R ++ + K +S+K+IVEMI FPVVNEACRV E
Sbjct: 583 YIYEKGSKPKPDPSVLSIVEESRKLTNIMPGGKPISVSDKEIVEMILFPVVNEACRVLDE 642
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+ ++A+DLDIASV+GM FP YR
Sbjct: 643 GVVIRASDLDIASVLGMSFPSYR 665
>gi|226510010|ref|NP_001148087.1| LOC100281695 [Zea mays]
gi|195615714|gb|ACG29687.1| peroxisomal fatty acid beta-oxidation multifunctional protein [Zea
mays]
Length = 727
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 280/503 (55%), Positives = 375/503 (74%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + +E GL+DA+ +PN+L+ T+R WAL+I R+PW+ +L +TD++ L
Sbjct: 164 MMLQSKFIAAKEGKERGLIDALCSPNELIKTSRLWALEIANCRKPWMRSLGRTDRLASLS 223
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + AR QA K +PN+ C+DV+E G++ G +AG+ KEA F++L+ + T K+
Sbjct: 224 EARAVLNAARQQAMKVSPNMPQHQACLDVMEEGILYGGQAGVLKEARVFKELVVAPTSKA 283
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FFAQR T+KVPGVTD+ L PR ++KVA++GGGLMGSGIAT+L++SN V+LKEVN
Sbjct: 284 LVHVFFAQRSTTKVPGVTDVQLKPRPIRKVAVIGGGLMGSGIATSLLVSNISVVLKEVNP 343
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+ G + NL+ +KKG +T+++ K +SL G LDY FKDVDMVIEA+IE + L
Sbjct: 344 QFLQRGEKMIAGNLEGLIKKGSLTKDRMHKAMSLFKGALDYSDFKDVDMVIEAVIEKIPL 403
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF+D+EK CP HCILA+NTSTIDLN++GE+T S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 404 KQSIFSDIEKICPKHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 463
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQ I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQA+ LLV G D++ IDR
Sbjct: 464 EKTSPQAILDLITVGKIIKKVPVVVGNCTGFAVNRTFFPYTQASHLLVSLGIDVFRIDRV 523
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+ FGMPMGPF+L D+ G+GVA+A + + F ER S ++ +M +D R G+ KG+
Sbjct: 524 ISSFGMPMGPFQLQDVAGYGVALAVKDIYADAFGERNLGSNLVGLMVKDGRQGKVNAKGY 583
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+Y++ K PDP VK IE+ R + K L ++DI+EMIFFPVVNEACRV E
Sbjct: 584 YIYEKGAKPKPDPSVKHVIEEYRKQANTMPGGKPVTLMDQDILEMIFFPVVNEACRVMDE 643
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
+ ++A+DLDIASV+GMGFP YR
Sbjct: 644 NVVIRASDLDIASVLGMGFPKYR 666
>gi|242061308|ref|XP_002451943.1| hypothetical protein SORBIDRAFT_04g010370 [Sorghum bicolor]
gi|241931774|gb|EES04919.1| hypothetical protein SORBIDRAFT_04g010370 [Sorghum bicolor]
Length = 727
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 282/529 (53%), Positives = 384/529 (72%), Gaps = 10/529 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + +E GL+DA+ +P++L+ T+R WAL+I R+PW+ +L +TD++ L
Sbjct: 164 MMLQSKFITAKEGKERGLIDALCSPDELIKTSRLWALEIANCRKPWMRSLGRTDRLGSLS 223
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + AR QA K APN+ C+DV+E G++ G +AG+ KEA+ F++L+ + T K+
Sbjct: 224 EARAVLNAARQQAMKIAPNMPQHQACLDVMEEGILYGGQAGVLKEAKVFKELVIAPTSKA 283
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FFAQR T+KVPGVTD+ L PR ++KVA++GGGLMGSGIAT+L++SN V+LKEVN
Sbjct: 284 LVHVFFAQRSTTKVPGVTDVQLKPRPIRKVAVIGGGLMGSGIATSLLVSNISVVLKEVNP 343
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+ G + NL+ VK+G +T+++ K +SLL G LDY FKDVDMVIEA+IE + L
Sbjct: 344 QFLQRGEKMIAGNLEGLVKRGSLTKDRMHKAMSLLKGALDYSDFKDVDMVIEAVIEKIPL 403
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF+D+EK CP HCILA+NTSTIDLN++GE+T S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 404 KQSIFSDIEKICPKHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 463
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQ I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ + LLV G D++ IDR
Sbjct: 464 EKTSPQAILDLITVGKIIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSLGIDVFRIDRV 523
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+ FGMPMGPF+L D+ G+GVA+A + + F ER S ++ +M +D R G+ KG+
Sbjct: 524 ISSFGMPMGPFQLQDVAGYGVALAVKGIYADAFGERNLNSNLVDLMVKDGRQGKVNGKGY 583
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+Y++ K PDP VK +E+ + + K L+++DI+EMIFFPVVNEACRV E
Sbjct: 584 YIYEKGGKPKPDPSVKHVLEEYQKQANTMPGGKPVTLTDQDILEMIFFPVVNEACRVMDE 643
Query: 481 GIAVKAADLDIASVMGMGFPPYR----------FVTFIHRGFSKSSSCF 519
+ ++A+DLDIASV+GMGFP YR +IH SK + +
Sbjct: 644 NVVIRASDLDIASVLGMGFPKYRGGLVFWADTVGAPYIHSKLSKWAEIY 692
>gi|315419009|gb|ADU15551.1| MFP [Gossypium hirsutum]
Length = 721
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 290/523 (55%), Positives = 391/523 (74%), Gaps = 1/523 (0%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML+SKP+ EE LGL+DA+V +L+ + WALD+ E R+PW+ +L++TDKI L
Sbjct: 162 MMLSSKPIMSEEGKKLGLIDALVPSKELLKVSCAWALDMAERRKPWLRSLHRTDKIGSLS 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EARE+ + AR QA+K APNL VC+DV+E G+V G +G+ KEA+ F++++ S+T +
Sbjct: 222 EAREVLRMARLQAKKTAPNLPQHQVCLDVIEEGIVHGGYSGVLKEAKVFKEIVLSDTSRG 281
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+F AQR TSKVP VTD+GL PR+VKKVAI+GGGLMGSGIATALI++N V+LKEVN
Sbjct: 282 LVHVFLAQRATSKVPNVTDVGLKPRQVKKVAIIGGGLMGSGIATALIVNNIFVVLKEVNS 341
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
++L GI V AN++ +GKMT++K EK +S+L GVLDY FKDVDMVIEA++ENV+L
Sbjct: 342 EYLLKGIKTVEANVRGLANRGKMTKDKAEKALSMLKGVLDYSEFKDVDMVIEAVVENVAL 401
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IF+++EK CPPHCILA+NTSTIDLNLIGE+ S+DR+VGAHFFSPAH+MPLLE VRT
Sbjct: 402 KQKIFSEIEKACPPHCILATNTSTIDLNLIGEKMNSQDRLVGAHFFSPAHLMPLLETVRT 461
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT-DLYLIDR 359
+ SPQ+I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ LLV G D Y IDR
Sbjct: 462 QKASPQIILDLMTVGKVIKKVPVVVGNCTGFAVNRTFFPYTQGPHLLVSLGVDDAYRIDR 521
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
I FG P+GPF+L DL G+GVA A G ++ + F +R +KS ++ ++ +D R G+ KG
Sbjct: 522 VICNFGFPLGPFQLQDLAGYGVAFAVGQEYAKAFSDRIFKSPLLELLAKDGRNGKNNGKG 581
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
+Y+Y++ K PDP V IE++R ++ + K +++++++EMI FPVVNEACRV
Sbjct: 582 YYIYEKGSKPKPDPSVLSIIEESRRLTNIMPGGKPISVTDREVLEMILFPVVNEACRVLD 641
Query: 480 EGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNL 522
EG+ V+A+DLD+ASV+GM FP YR ++ ++NL
Sbjct: 642 EGVVVRASDLDVASVLGMSFPSYRGGIVFWADMVGANHVYRNL 684
>gi|17105223|gb|AAL35606.1|AF442962_1 peroxisomal multifunctional protein [Oryza sativa]
Length = 725
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 286/533 (53%), Positives = 383/533 (71%), Gaps = 11/533 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + +E GLVDA+ +P++L+ +R WAL+I +R+PW+ +L +TD++ L
Sbjct: 163 MMLQSKFITAKEGKEGGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLS 222
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + AR QA+K A NL C+DV+E GV+ G AG+ KEA+ F++L+ S T K+
Sbjct: 223 EARSVLNSARQQAKKVAANLPQHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKA 282
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR T+KVPGVTD+ L PR+++KVA++GGGLMGSGIATAL++SN V+LKEVN
Sbjct: 283 LVHAFFAQRLTTKVPGVTDVQLKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNP 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+F + G + ANL+ VK+G +T++K K +SLL G LDY FKDVDMVIEA+IE + L
Sbjct: 343 QFRQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALDYCDFKDVDMVIEAVIEKIPL 402
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF+DLEK CPPHCILA+NTSTIDLN++GE+T S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 403 KQSIFSDLEKVCPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 462
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQ I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ + LLV G D++ IDR
Sbjct: 463 EKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRV 522
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+ FGMPMGPF+L DL G+GV + G + F R S ++ +M ++ R G++ KG+
Sbjct: 523 ISSFGMPMGPFQLQDLAGYGVHCSKGF-YAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGY 581
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLY++ K PDP V+ I++ R + K LS++DI+EMIFFPVVNEACRV E
Sbjct: 582 YLYEKGGKPKPDPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDE 641
Query: 481 GIAVKAADLDIASVMGMGFPPYR----------FVTFIHRGFSKSSSCFKNLL 523
+ ++A+DLDIAS++GMGFP +R +IH SK + + +
Sbjct: 642 NVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGDFF 694
>gi|449472443|ref|XP_004153595.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 356
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 277/341 (81%), Positives = 315/341 (92%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKPVKGEEA SLGLVDA+V +L+S AR+WALDI E R+PW+ +L+KT+K+E L
Sbjct: 16 MMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKPWIISLHKTNKLESLA 75
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+AREIFKFARAQ RKQAPNL HP+VCIDVVE GVVSGPRAGLQKE EDFQ LL ++T KS
Sbjct: 76 DAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTSKS 135
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FFAQRGT+KVPGV+DLGL PRR+ KVA++GGGLMGSGIATALILSNYPVILKEVNE
Sbjct: 136 LIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEVNE 195
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFLEAG+GRV+ANLQSRV+KG MT EKFE+TISLL GVLDYESFKDVDMVIEA+IEN+SL
Sbjct: 196 KFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFKDVDMVIEAVIENISL 255
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQI DLEKYCPPHCILA+NTSTIDL+LIGE+T S DRIVGAHFFSPAH+MPLLE+VRT
Sbjct: 256 KQQIIVDLEKYCPPHCILATNTSTIDLDLIGEKTNSHDRIVGAHFFSPAHIMPLLEVVRT 315
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYT 341
N+T+PQVIVDL+D+GK+IKKTP+VVGNCTGFAVNRMFFPYT
Sbjct: 316 NRTAPQVIVDLVDVGKRIKKTPVVVGNCTGFAVNRMFFPYT 356
>gi|255080968|ref|XP_002504050.1| predicted protein [Micromonas sp. RCC299]
gi|226519317|gb|ACO65308.1| predicted protein [Micromonas sp. RCC299]
Length = 720
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 280/510 (54%), Positives = 360/510 (70%), Gaps = 8/510 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SKPVK EEA LGLVDA+V +QL++ A Q A DI + R P + + K+ P
Sbjct: 153 MMLKSKPVKAEEALKLGLVDAIVPADQLIAKATQLAKDIADKRIPRKMASFDSAKL-PAD 211
Query: 61 EA--REIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
EA +++F AR QA++ + HP +C+D VE GV G AGL E + F K + S C
Sbjct: 212 EAMAKKVFAGARRQAKRVKHLMPHPWLCLDAVETGVTKGSVAGLASEQDAFAKAVSSRAC 271
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
K LVH FFA R T+ VPGVTD+GL PR K VA++GGGLMGSGIATA LS V+LKE+
Sbjct: 272 KGLVHFFFASRSTAAVPGVTDVGLKPRATKCVAVVGGGLMGSGIATACALSGVRVLLKEI 331
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N+KFL+AG+ RVRANL S VKKG+MT +K + SL T L Y+ FK+ DMVIEA+IEN+
Sbjct: 332 NQKFLDAGMARVRANLASNVKKGRMTSQKADAIYSLCTPCLTYDKFKEADMVIEAVIENL 391
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
LKQ+IFADLE+ C CIL++NTSTID+ + + + +RI+GAHFFSPAHVM L EI+
Sbjct: 392 DLKQKIFADLERSCRSDCILSTNTSTIDITKVASKMRNPERILGAHFFSPAHVMQLFEII 451
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
RT+ T PQV+VD L + K+IKKTP+VVGNCTGFAVNR+FFPYT +A LLV+ G D Y ID
Sbjct: 452 RTDATPPQVLVDALGLSKQIKKTPVVVGNCTGFAVNRVFFPYTMSACLLVDLGLDPYAID 511
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
AI FGMPMGPFRL DLVG V + G FI++FP R Y+S +IP + + R GE + K
Sbjct: 512 NAIRAFGMPMGPFRLGDLVGHDVGVHVGQNFIDDFPLRVYESKLIPGLMKSGRMGEKSGK 571
Query: 419 GFYLYDERRKASPDPE-VKKFIEKARSMSG----VAIDPKFAKLSEKDIVEMIFFPVVNE 473
GFY+YD +R A+PDPE + + +R+ + + + ++ DI EMIFFPVVNE
Sbjct: 572 GFYVYDAKRAATPDPEGIAALLHASRAAASGRFKRSTSGELLAMTADDIAEMIFFPVVNE 631
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
ACR AEG+ V+A+DLD+AS++GMGFPP+R
Sbjct: 632 ACRCLAEGVVVRASDLDVASILGMGFPPFR 661
>gi|355388877|gb|AER62381.1| hypothetical protein [Pseudoroegneria spicata]
Length = 339
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 270/339 (79%), Positives = 306/339 (90%)
Query: 31 TARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVV 90
TAR+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HPI+CIDV+
Sbjct: 1 TARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPIICIDVI 60
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
E G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR+++KV
Sbjct: 61 EEGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIRKV 120
Query: 151 AILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK 210
AILGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEK 180
Query: 211 TISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLI 270
+SLLTG L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLI
Sbjct: 181 ALSLLTGTLGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 271 GERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTG 330
GE+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 331 FAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMG 369
FAVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMPMG
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388891|gb|AER62388.1| hypothetical protein [Australopyrum retrofractum]
Length = 339
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/339 (79%), Positives = 305/339 (89%)
Query: 31 TARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVV 90
TAR+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+
Sbjct: 1 TARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVI 60
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
E G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KV
Sbjct: 61 EEGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 151 AILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK 210
AILGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEK 180
Query: 211 TISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLI 270
+SL+TG L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLI
Sbjct: 181 ALSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 271 GERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTG 330
GE+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 331 FAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMG 369
FAVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMPMG
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388879|gb|AER62382.1| hypothetical protein [Taeniatherum caput-medusae]
Length = 339
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/339 (79%), Positives = 305/339 (89%)
Query: 31 TARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVV 90
TAR+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP++CIDV+
Sbjct: 1 TARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVI 60
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
E G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KV
Sbjct: 61 EEGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 151 AILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK 210
AILGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI RV+ANLQSRV+KGKMT+E++EK
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRVKANLQSRVRKGKMTEERYEK 180
Query: 211 TISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLI 270
+SLL+G L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLI
Sbjct: 181 ALSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 271 GERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTG 330
GE+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 331 FAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMG 369
FAVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMPMG
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388869|gb|AER62377.1| hypothetical protein [Aegilops tauschii]
Length = 339
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/339 (79%), Positives = 305/339 (89%)
Query: 31 TARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVV 90
TAR+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+
Sbjct: 1 TARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVI 60
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
E G++SGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KV
Sbjct: 61 EEGIISGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 151 AILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK 210
AILGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEK 180
Query: 211 TISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLI 270
+SL+TG L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLI
Sbjct: 181 ALSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 271 GERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTG 330
GE+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 331 FAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMG 369
FAVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMPMG
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388899|gb|AER62392.1| hypothetical protein [Henrardia persica]
gi|355388901|gb|AER62393.1| hypothetical protein [Henrardia persica]
Length = 339
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/339 (79%), Positives = 305/339 (89%)
Query: 31 TARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVV 90
TAR+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+
Sbjct: 1 TARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVI 60
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
E G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KV
Sbjct: 61 EEGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 151 AILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK 210
AILGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEK 180
Query: 211 TISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLI 270
+SLL+G L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLI
Sbjct: 181 ALSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 271 GERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTG 330
GE+T S+DRI+GAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTG
Sbjct: 241 GEKTKSQDRIIGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 331 FAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMG 369
FAVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMPMG
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388881|gb|AER62383.1| hypothetical protein [Taeniatherum caput-medusae]
gi|355388903|gb|AER62394.1| hypothetical protein [Triticum monococcum subsp. aegilopoides]
Length = 339
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/339 (79%), Positives = 305/339 (89%)
Query: 31 TARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVV 90
TAR+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP++CIDV+
Sbjct: 1 TARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVI 60
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
E G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KV
Sbjct: 61 EEGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 151 AILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK 210
AILGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEK 180
Query: 211 TISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLI 270
+SLL+G L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLI
Sbjct: 181 ALSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 271 GERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTG 330
GE+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 331 FAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMG 369
FAVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMPMG
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|168057325|ref|XP_001780666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667934|gb|EDQ54552.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 726
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 282/504 (55%), Positives = 356/504 (70%), Gaps = 4/504 (0%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKPV EEA LGLVDAVV QLV AR++ALDI R+ W +L D I
Sbjct: 167 MMLTSKPVMSEEAKQLGLVDAVVPLQQLVPVARKYALDIASGRQAWRRSLSLIDHIGTPE 226
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E+ +I K ARA+A+K N+ HP V +D +E G++ G AG KE E+ L+ S T K
Sbjct: 227 ESSKILKQARARAQKAYRNVPHPFVMLDCIEKGILHGGVAGTLKEEEESPMLVASPTAKG 286
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+HIFFAQR K+ GVTD GL P ++K VA++GGGLMGSGIATAL L+N PVILKEVN+
Sbjct: 287 LIHIFFAQRSAFKIQGVTDSGLKPHKMKSVAVIGGGLMGSGIATALALNNVPVILKEVNQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+AG+ R+ AN+ +R++ EK +K +S + G LDY F DVDMVIEA+IE++ L
Sbjct: 347 EFLQAGLKRIEANVNARLRS---ASEKAQKVLSFVKGTLDYADFSDVDMVIEAVIESIPL 403
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIFADLEKYC C+LASNTSTIDL LIG++T S+DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 404 KQQIFADLEKYCKSTCLLASNTSTIDLGLIGQKTKSQDRIIGAHFFSPAHVMPLLEIVRT 463
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ TS Q I D+L + K IKK P+VV +C GFAVNRMFFPY QA LLV GT Y ID
Sbjct: 464 HDTSKQAIQDMLALAKTIKKVPVVVRSCVGFAVNRMFFPYFQAGHLLVHLGTHPYRIDAV 523
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FGMPMGPFRLADL G + AT + + F ERTY++ + ++ ED R GE T G+
Sbjct: 524 VKAFGMPMGPFRLADLTGIQIGQATSRIYKDAFGERTYQTNLNDLLLEDNRYGERTGMGY 583
Query: 421 YLYDERRKA-SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y + +A P PE+ ++ K R + + + K +S+++IVEMIF+ VVNEACRV
Sbjct: 584 YNYKKGSRAEQPAPELDGYLTKTRQAASLIPNGKIVDISDEEIVEMIFYGVVNEACRVLD 643
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E + V++ADLDIASV+GMGFP YR
Sbjct: 644 EDVVVRSADLDIASVLGMGFPAYR 667
>gi|355388871|gb|AER62378.1| hypothetical protein [Dasypyrum villosum]
Length = 338
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/338 (79%), Positives = 304/338 (89%)
Query: 31 TARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVV 90
TAR+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+
Sbjct: 1 TARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVI 60
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
E GVVSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KV
Sbjct: 61 EEGVVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 151 AILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK 210
AILGGGLMGSGIATA+ILSNYPVILKEVNEKFL AGI R++ANLQSRV+KGKMT++++EK
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGKMTEQRYEK 180
Query: 211 TISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLI 270
+SL+TG L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLI
Sbjct: 181 ALSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 271 GERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTG 330
GE+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 331 FAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPM 368
FAVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMPM
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPM 338
>gi|355388897|gb|AER62391.1| hypothetical protein [Eremopyrum triticeum]
Length = 339
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/339 (78%), Positives = 305/339 (89%)
Query: 31 TARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVV 90
TAR+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP++CIDV+
Sbjct: 1 TARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVI 60
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
E G+VSGP+AGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KV
Sbjct: 61 EEGIVSGPQAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 151 AILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK 210
AILGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEK 180
Query: 211 TISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLI 270
+SLL+G L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLI
Sbjct: 181 ALSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 271 GERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTG 330
GE+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 331 FAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMG 369
FAVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMPMG
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|147827212|emb|CAN66465.1| hypothetical protein VITISV_006222 [Vitis vinifera]
Length = 859
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/553 (49%), Positives = 368/553 (66%), Gaps = 54/553 (9%)
Query: 5 SKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEARE 64
SK + EE + LGLVDA+V+ +L+ +R+WALDI++ R+PWV +L++T+K+ + EA
Sbjct: 197 SKSISSEEGYKLGLVDAIVSSEELLKVSRRWALDIVDKRKPWVRSLHQTEKLGSVSEALX 256
Query: 65 IFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK----- 119
I K +R QARK P+L C+DV+E G+V G +GL KE + F L+ S+T K
Sbjct: 257 ILKISRQQARKTVPHLPQHQACLDVIEEGIVHGGYSGLLKETKVFNXLVLSDTAKGLIHV 316
Query: 120 -------------------SLVHIFFAQRGTS---------------------------- 132
SL I++ G
Sbjct: 317 FFAQRATSKALQKLLMLDPSLRTIYWLCWGQGPGHSCLCVGYLPIELPVGAITALMQNLI 376
Query: 133 --KVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRV 190
VP VTD+GL PR VKKVA++GGGLMGSGIATALI SN V+LKEVN ++L GI +
Sbjct: 377 LGTVPNVTDIGLKPRNVKKVAVIGGGLMGSGIATALITSNIYVVLKEVNSEYLLKGIKTI 436
Query: 191 RANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEK 250
AN++ V KGK+TQ+K K +S+L GVLDY FKD+DMVIEA+IEN+ LKQ+IF+++EK
Sbjct: 437 EANVRGLVTKGKLTQDKARKALSMLKGVLDYSEFKDIDMVIEAVIENIXLKQKIFSEIEK 496
Query: 251 YCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVD 310
C PHCILA+NTSTIDLNL+GE+T S+DRI+GAHFFSPAHVMPLLE+VRT +TS QVI+D
Sbjct: 497 ICSPHCILATNTSTIDLNLVGEKTSSQDRIIGAHFFSPAHVMPLLEVVRTEKTSAQVILD 556
Query: 311 LLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGP 370
L+ +GK IKK P+VVG+CTGFAVNR FFPY Q A LV G D + ID I+ FG+PMGP
Sbjct: 557 LMTVGKAIKKIPVVVGSCTGFAVNRTFFPYAQGAHFLVNLGVDPFRIDWVISNFGLPMGP 616
Query: 371 FRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDERRKAS 430
F+L DL G+GVA+A G +F F RT++S ++ ++ ++ R G+ KG+Y+Y++ K
Sbjct: 617 FQLQDLSGYGVAVAVGKEFATAFQGRTFESPLVNLLLKNGRNGKQNGKGYYIYEKGSKPR 676
Query: 431 PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLD 490
PDP V IE++R ++ + K + ++I+EMI FPVVNEACRV EG+ V+A+DLD
Sbjct: 677 PDPSVLPIIEESRRLANIMPGGKPISVXNQEILEMILFPVVNEACRVLDEGVVVRASDLD 736
Query: 491 IASVMGMGFPPYR 503
I SV+GM FP YR
Sbjct: 737 ITSVLGMSFPSYR 749
>gi|355388919|gb|AER62402.1| hypothetical protein [Dasypyrum villosum]
Length = 337
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/337 (79%), Positives = 304/337 (90%)
Query: 31 TARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVV 90
TAR+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+
Sbjct: 1 TARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVI 60
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
E G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KV
Sbjct: 61 EEGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 151 AILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK 210
AILGGGLMGSGIATA+ILSNYPVILKEVNEKFL+AGI R++ANLQSRV+KGKMT++++EK
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVILKEVNEKFLBAGIDRIKANLQSRVRKGKMTEQRYEK 180
Query: 211 TISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLI 270
+SL+TG L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLI
Sbjct: 181 ALSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 271 GERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTG 330
GE+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 331 FAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMP 367
FAVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMP
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 337
>gi|355388883|gb|AER62384.1| hypothetical protein [Dasypyrum villosum]
Length = 337
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/337 (79%), Positives = 304/337 (90%)
Query: 31 TARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVV 90
TAR+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+
Sbjct: 1 TARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVI 60
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
E G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KV
Sbjct: 61 EEGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 151 AILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK 210
AILGGGLMGSGIATA+ILSNYPVILKEVNEKFL+AGI R++ANLQSRV+KGKMT++++EK
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVILKEVNEKFLDAGIDRIKANLQSRVRKGKMTEQRYEK 180
Query: 211 TISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLI 270
+SL+TG L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLI
Sbjct: 181 ALSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 271 GERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTG 330
GE+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 331 FAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMP 367
FAVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMP
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 337
>gi|355388885|gb|AER62385.1| hypothetical protein [Dasypyrum villosum]
Length = 337
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/337 (79%), Positives = 303/337 (89%)
Query: 31 TARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVV 90
TAR+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+
Sbjct: 1 TARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVI 60
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
E G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KV
Sbjct: 61 EEGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 151 AILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK 210
AILGGGLMGSGIATA+ILSNYPVILKEVNEKFL AGI R++ANLQSRV+KGKMT++++EK
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGKMTEQRYEK 180
Query: 211 TISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLI 270
+SL+TG L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLI
Sbjct: 181 ALSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 271 GERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTG 330
GE+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 331 FAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMP 367
FAVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMP
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 337
>gi|355388907|gb|AER62396.1| hypothetical protein [Hordeum marinum subsp. marinum]
Length = 337
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/337 (79%), Positives = 303/337 (89%)
Query: 31 TARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVV 90
TAR+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+
Sbjct: 1 TARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVI 60
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
E G+VSGPRAGL KEA FQ LL S+TCK L+H+FF+QR TSKVPG TDLGL PR++ KV
Sbjct: 61 EEGIVSGPRAGLWKEANAFQSLLFSDTCKCLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 151 AILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK 210
AILGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEK 180
Query: 211 TISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLI 270
+SL+TG L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLI
Sbjct: 181 ALSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 271 GERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTG 330
GE+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 331 FAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMP 367
FAVNRMFFPYTQ+A LLV+ G D+Y IDRA TKFGMP
Sbjct: 301 FAVNRMFFPYTQSALLLVDYGMDVYKIDRACTKFGMP 337
>gi|355388905|gb|AER62395.1| hypothetical protein [Hordeum bogdanii]
Length = 338
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/338 (78%), Positives = 304/338 (89%)
Query: 31 TARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVV 90
TAR+WALDI E ++PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP++CIDV+
Sbjct: 1 TARRWALDICELKKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVI 60
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
E G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KV
Sbjct: 61 EEGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIMKV 120
Query: 151 AILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK 210
AILGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEK 180
Query: 211 TISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLI 270
+SLL+G L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLI
Sbjct: 181 ALSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 271 GERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTG 330
GE+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 331 FAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPM 368
FAVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMPM
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPM 338
>gi|355388889|gb|AER62387.1| hypothetical protein [Psathyrostachys juncea]
Length = 339
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/338 (78%), Positives = 304/338 (89%)
Query: 32 ARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVE 91
AR+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+E
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 92 AGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVA 151
G+VSGPRAGL KEA FQ LL S+TCK+L+H+FF+QR TSKVPG TDLGL PR++ KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQGLLFSDTCKNLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 152 ILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKT 211
ILGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 212 ISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIG 271
+SLL+G L YE FK+VD+VIEA+IE+V LKQQIFADLEKYCP HCILA+NTSTIDLNLIG
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIEDVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 272 ERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGF 331
E+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 332 AVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMG 369
AVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMPMG
Sbjct: 302 AVNRMFFPYTQSALLFVDHGMDVYKIDRACTKFGMPMG 339
>gi|355388873|gb|AER62379.1| hypothetical protein [Psathyrostachys juncea]
Length = 339
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/338 (78%), Positives = 304/338 (89%)
Query: 32 ARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVE 91
AR+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+E
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 92 AGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVA 151
G+VSGPRAGL KEA FQ LL S+TCK+L+H+FF+QR TSKVPG TDLGL PR++ KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQGLLFSDTCKNLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 152 ILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKT 211
ILGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 212 ISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIG 271
+SLL+G L YE FK+VD+VIEA+IE+V LKQQIFADLEKYCP HCILA+NTSTIDLNLIG
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIEDVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 272 ERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGF 331
E+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 332 AVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMG 369
AVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMPMG
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388913|gb|AER62399.1| hypothetical protein [Aegilops speltoides var. ligustica]
Length = 325
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/324 (78%), Positives = 291/324 (89%)
Query: 34 QWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAG 93
+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFAR+QARKQA NL HP+VCIDV+E G
Sbjct: 1 RWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARSQARKQAANLEHPLVCIDVIEEG 60
Query: 94 VVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAIL 153
++SGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KVAIL
Sbjct: 61 IISGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAIL 120
Query: 154 GGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTIS 213
GGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK +S
Sbjct: 121 GGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALS 180
Query: 214 LLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGER 273
L+TG L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLIGE+
Sbjct: 181 LVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEK 240
Query: 274 TYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAV 333
T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTGFAV
Sbjct: 241 TKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAV 300
Query: 334 NRMFFPYTQAAFLLVERGTDLYLI 357
NRMFFPYTQ+A L V+ G D+Y I
Sbjct: 301 NRMFFPYTQSALLFVDYGMDVYKI 324
>gi|355388887|gb|AER62386.1| hypothetical protein [Agropyron mongolicum]
Length = 335
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/335 (79%), Positives = 301/335 (89%)
Query: 33 RQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEA 92
R+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+E
Sbjct: 1 RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60
Query: 93 GVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAI 152
G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KVAI
Sbjct: 61 GIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIMKVAI 120
Query: 153 LGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTI 212
LGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK +
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 213 SLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGE 272
SLL+G L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLIGE
Sbjct: 181 SLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 273 RTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFA 332
+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 333 VNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMP 367
VNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMP
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 335
>gi|355388909|gb|AER62397.1| hypothetical protein [Aegilops longissima]
Length = 335
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/335 (78%), Positives = 300/335 (89%)
Query: 33 RQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEA 92
R+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+E
Sbjct: 1 RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60
Query: 93 GVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAI 152
G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KVAI
Sbjct: 61 GIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120
Query: 153 LGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTI 212
LGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK +
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 213 SLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGE 272
SL+TG L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLIGE
Sbjct: 181 SLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 273 RTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFA 332
+T S+DRIVGAHFFSPAHVMPLLEIV T TS QV+VDLLD+GK+IKKTPIVVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVCTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 333 VNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMP 367
VNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMP
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 335
>gi|210257071|dbj|BAG80663.1| multifunctional protein [Nicotiana tabacum]
Length = 668
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/500 (53%), Positives = 361/500 (72%), Gaps = 5/500 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++SK + EE LGL+DA+V+ +L++ AR WALDI+E R+P +L KTDK+ P
Sbjct: 163 MLMSSKTITSEEGKELGLIDAIVSSEELLAVARCWALDIVEGRQPHCNSLEKTDKLGPKD 222
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E+ EI K AR + R AP H C+DV+E G++SG +G+ KE + F++L+ S T K
Sbjct: 223 ESLEILKSARQRYR--AP---HYSACLDVIEEGIISGGFSGVLKEDKVFKELVLSNTAKG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+F A+R TSKVPGVTD+GL PRR++KVA++GGGLMGSGIATALI+SN V++KE+N
Sbjct: 278 LLHVFLAERATSKVPGVTDIGLKPRRIEKVAVVGGGLMGSGIATALIMSNMNVVVKEINH 337
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
++L + V ANLQ V +G++ Q+K ++T+SLL G LDYE KDVDMVIEA+ E VSL
Sbjct: 338 EYLLKAMKSVEANLQGLVTRGQLNQDKMKRTLSLLKGTLDYEDLKDVDMVIEAVNEVVSL 397
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF D+EK C P CI ASNTSTI L++IGERT S+DRI+G H FSPAHVM L+EIVRT
Sbjct: 398 KQSIFEDIEKVCSPDCIFASNTSTISLDVIGERTSSQDRILGIHLFSPAHVMTLVEIVRT 457
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TSPQVIVD++ K +KK PIVV NCTGFAVNR FFPY Q LL G D++ +DR
Sbjct: 458 ENTSPQVIVDVIRFTKTMKKVPIVVKNCTGFAVNRNFFPYMQGPDLLANLGVDIFRVDRV 517
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
IT+FGM +GPF+L DL G+G+ +A +F+ FP+R ++S ++ +M E+ R G+ KG+
Sbjct: 518 ITEFGMRLGPFQLQDLSGYGIFLAGVKEFVAAFPDRAFQSPLVQLMVENGREGKKNGKGY 577
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y Y + K D V + +E++ + +A K +++++I+EMIFFPVVNEACRV E
Sbjct: 578 YTYKKGSKPEADHSVIQVVEESMRFTNIAPGGKPISVTDEEILEMIFFPVVNEACRVIEE 637
Query: 481 GIAVKAADLDIASVMGMGFP 500
GI V+A+D+DIASV G FP
Sbjct: 638 GIVVRASDIDIASVHGFKFP 657
>gi|355388921|gb|AER62403.1| hypothetical protein [Pseudoroegneria tauri subsp. libanotica]
Length = 338
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/338 (78%), Positives = 299/338 (88%)
Query: 32 ARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVE 91
AR+WALDI E R+PW+ +LYKTD +EPLGEAREI KFARAQARKQA NL HP+ CIDV+E
Sbjct: 1 ARRWALDICELRKPWIKSLYKTDXLEPLGEAREILKFARAQARKQAANLEHPLXCIDVIE 60
Query: 92 AGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVA 151
G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KVA
Sbjct: 61 EGIVSGPRAGLWKEANAFQXLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIXKVA 120
Query: 152 ILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKT 211
ILGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++ K
Sbjct: 121 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYXKA 180
Query: 212 ISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIG 271
+SL TG L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLIG
Sbjct: 181 LSLXTGXLGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 240
Query: 272 ERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGF 331
E+T S+DRIVGAHFFSPAHVMPLLEIV T TS QV+VDLLD+GK+IKKTPIVVGNCTGF
Sbjct: 241 EKTKSQDRIVGAHFFSPAHVMPLLEIVXTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 300
Query: 332 AVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMG 369
AVNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMPMG
Sbjct: 301 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 338
>gi|355388893|gb|AER62389.1| hypothetical protein [Australopyrum retrofractum]
Length = 333
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/333 (78%), Positives = 299/333 (89%)
Query: 33 RQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEA 92
R+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+E
Sbjct: 1 RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60
Query: 93 GVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAI 152
G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KVAI
Sbjct: 61 GIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120
Query: 153 LGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTI 212
LGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK +
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 213 SLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGE 272
SL+TG L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLIGE
Sbjct: 181 SLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 273 RTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFA 332
+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 333 VNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
VNRMFFPYTQ+A L V+ G D+Y IDRA TKFG
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFG 333
>gi|355388923|gb|AER62404.1| hypothetical protein [Secale cereale]
Length = 335
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/335 (78%), Positives = 298/335 (88%)
Query: 33 RQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEA 92
R+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+ CIDV+E
Sbjct: 1 RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLXCIDVIEE 60
Query: 93 GVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAI 152
G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KVAI
Sbjct: 61 GIVSGPRAGLWKEANXFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120
Query: 153 LGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTI 212
LGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK +
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 213 SLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGE 272
SL G L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLIGE
Sbjct: 181 SLXXGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 273 RTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFA 332
+T S+DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 333 VNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMP 367
VNRMFFPYTQ+A L V+ G D+Y IDRA TKFGMP
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 335
>gi|355388895|gb|AER62390.1| hypothetical protein [Eremopyrum bonaepartis]
Length = 332
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/332 (78%), Positives = 298/332 (89%)
Query: 34 QWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAG 93
+WALDI E R+PW+ +LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+E G
Sbjct: 1 RWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEEG 60
Query: 94 VVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAIL 153
+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KVAIL
Sbjct: 61 IVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAIL 120
Query: 154 GGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTIS 213
GGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK +S
Sbjct: 121 GGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALS 180
Query: 214 LLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGER 273
LL+G L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLIGE+
Sbjct: 181 LLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEK 240
Query: 274 TYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAV 333
T S+DRI+GAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTGFAV
Sbjct: 241 TNSQDRIIGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAV 300
Query: 334 NRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
NRMFFPYTQ+A L V+ G D+Y IDRA TKFG
Sbjct: 301 NRMFFPYTQSALLFVDYGMDVYKIDRACTKFG 332
>gi|355388875|gb|AER62380.1| hypothetical protein [Pseudoroegneria tauri subsp. libanotica]
Length = 333
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/333 (78%), Positives = 298/333 (89%)
Query: 33 RQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEA 92
R+WALDI E R+PW+ +LYKTD++EPLGEAREI KFARAQARKQA NL HP+VCIDV+E
Sbjct: 1 RRWALDICELRKPWIKSLYKTDRLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60
Query: 93 GVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAI 152
G+VSGPRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KVAI
Sbjct: 61 GIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120
Query: 153 LGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTI 212
LGGGLMGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK +
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 213 SLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGE 272
SL+TG L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLIGE
Sbjct: 181 SLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 273 RTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFA 332
+T S+DRIVGAHFFSPAHVMPLLEIV T TS QV+VDLLD+GK+IKKTPIVVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVCTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 333 VNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
VNRMFFPYTQ+A L V+ G D+Y IDRA TKFG
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFG 333
>gi|302834984|ref|XP_002949054.1| hypothetical protein VOLCADRAFT_74021 [Volvox carteri f.
nagariensis]
gi|300265799|gb|EFJ49989.1| hypothetical protein VOLCADRAFT_74021 [Volvox carteri f.
nagariensis]
Length = 732
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/512 (54%), Positives = 366/512 (71%), Gaps = 9/512 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTS P+K E LGLVDA+ +QL++ A+ ALDI E ++P + +L +TDK+ PLG
Sbjct: 162 MMLTSTPIKAEAGLKLGLVDALAPADQLLAAAKSLALDIAEGKKPRMYSLTRTDKLPPLG 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EA + ARA+A K+A L HP +C++ ++AG+ +G AGL E F + +T K+
Sbjct: 222 EALAVLDMARAEASKRARGLRHPQLCLNAIQAGIENGGAAGLAAEGAAFAEAASLDTHKA 281
Query: 121 LVHIFFAQRGTSKVPGVTDL-GLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
LVHIFFAQR T KV GVTD+ GL PR ++ VA+LGGGLMGSGIATAL+L+ VILKEVN
Sbjct: 282 LVHIFFAQRSTKKVKGVTDVPGLKPRPIRCVAVLGGGLMGSGIATALVLAGVDVILKEVN 341
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ FL+ G+GR+++NLQSRVKKG M+ + ++ + G LDY F DMVIEA+IE++
Sbjct: 342 QNFLDGGMGRIKSNLQSRVKKGAMSADAATAALARVKGALDYNDFGGADMVIEAVIEDIG 401
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGER-----TYSKDRIVGAHFFSPAHVMPL 294
LKQ+IFADLE+ C P IL++NTSTID++L+G + S R++GAHFFSPAHVMPL
Sbjct: 402 LKQRIFADLERVCRPDAILSTNTSTIDIDLVGAKMEDGGAKSASRLLGAHFFSPAHVMPL 461
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LEIVRT++T Q ++D L + +IKKTP+VVGNCTGFAVNR+FFPYT +A LL + G +
Sbjct: 462 LEIVRTSRTGAQALLDTLALSTRIKKTPVVVGNCTGFAVNRVFFPYTMSAVLLADLGMNP 521
Query: 355 YLIDRAIT-KFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAG 413
Y ID + KFGMPMGPFRL DLVG + + G F+ +FPER Y S +IP++ E KR G
Sbjct: 522 YRIDATVAGKFGMPMGPFRLNDLVGSDIGLHVGANFVTSFPERVYVSRLIPLLNEAKRLG 581
Query: 414 ETTRKGFYLYDER-RKASPDPEVKKFIEKARSMSGVAID-PKFAKLSEKDIVEMIFFPVV 471
E T KGFY +D + RKASPDPE+ ++++R + + + K LS+ DI++ IFFPVV
Sbjct: 582 EKTGKGFYKFDAKTRKASPDPELAPLLDESRKAAALVKEGAKPPALSDADILDFIFFPVV 641
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE CRV AEGI K ADLD+ASVM MGFP R
Sbjct: 642 NEGCRVVAEGIVDKPADLDVASVMAMGFPAVR 673
>gi|145345062|ref|XP_001417042.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577268|gb|ABO95335.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 722
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/516 (51%), Positives = 361/516 (69%), Gaps = 4/516 (0%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK +K EEA LGLVD + P+++V+ A A I ++Y+ DK+
Sbjct: 158 MMLKSKSIKAEEALKLGLVDKIADPSRIVAEASALAKAIASGSVKRELSMYRKDKLPDPK 217
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
I K A +A++ + H +C+D + G+ GP GL++EAE+F+K + S K
Sbjct: 218 STEMILKEASKKAKRVQSVMPHVALCVDAISVGLAQGPEEGLKREAENFKKAVSSPAAKG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR T+ VPG+TD+GL PR +K V ++GGGLMGSGIATA +L+ V+LKE+ +
Sbjct: 278 LVHFFFAQRATNVVPGITDVGLKPRPMKSVGVVGGGLMGSGIATACLLAGIQVVLKEIKQ 337
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+AG+GR+++NL S V+KG+MT++K + +SL+ L + F+ DMVIEA+IEN+ L
Sbjct: 338 EFLDAGVGRIQSNLTSMVRKGRMTEDKARQLMSLVKPTLTDQDFRQCDMVIEAVIENLPL 397
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IF +LE+ C P CIL++NTSTID+ I + + +RIVGAHFFSPAHVM L EI+RT
Sbjct: 398 KQKIFCELERICKPDCILSTNTSTIDITKIAAKMKNPERIVGAHFFSPAHVMQLFEIIRT 457
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ T Q++VD L + K+IKKTP+VVGNCTGFAVNR+FFPYT +A +LV+ G D Y IDRA
Sbjct: 458 DATPAQILVDTLGLSKQIKKTPVVVGNCTGFAVNRIFFPYTMSATVLVDIGCDPYAIDRA 517
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I FGMPMGPFRL DLVG V + G FI++FP+R Y+S +IP + +KR GE + GF
Sbjct: 518 IMMFGMPMGPFRLGDLVGHDVGVHVGQNFIDDFPDRVYRSPLIPSLLANKRLGEKSGAGF 577
Query: 421 YLYDERRKASPDPE-VKKFIEKARSMSGVAID--PKFAKLSEKDIVEMIFFPVVNEACRV 477
Y YD +R+A+PD E V+ I +R+ S + +D P A LS ++I EMIFFPVVNEACRV
Sbjct: 578 YKYDNKRRATPDSEGVEMLIAASRAQSKLPLDGSPIPAGLSPQEIAEMIFFPVVNEACRV 637
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFS 513
+EGI VKA D+D A+++GMGFP +R +H G S
Sbjct: 638 LSEGIVVKAGDIDTAAILGMGFPAFRG-GVVHWGDS 672
>gi|355388867|gb|AER62376.1| hypothetical protein [Hordeum vulgare subsp. spontaneum]
Length = 315
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/314 (78%), Positives = 282/314 (89%)
Query: 38 DILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSG 97
DI E R+PW+ +LYKTDK+E LGEAREI KFARAQARKQA NL HP++CIDV+E G+VSG
Sbjct: 1 DICELRKPWIKSLYKTDKLESLGEAREILKFARAQARKQAANLEHPLICIDVIEEGIVSG 60
Query: 98 PRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGL 157
PRAGL KEA FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KVAILGGGL
Sbjct: 61 PRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIMKVAILGGGL 120
Query: 158 MGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTG 217
MGSGIATA+ILSNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK +SLL+G
Sbjct: 121 MGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLLSG 180
Query: 218 VLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSK 277
L YE FK+VD+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLIGE+T S+
Sbjct: 181 ALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQ 240
Query: 278 DRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMF 337
DRIVGAHFFSPAHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTGFAVNRMF
Sbjct: 241 DRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMF 300
Query: 338 FPYTQAAFLLVERG 351
FPYTQ+A L V+ G
Sbjct: 301 FPYTQSALLFVDYG 314
>gi|218196124|gb|EEC78551.1| hypothetical protein OsI_18514 [Oryza sativa Indica Group]
Length = 391
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/346 (69%), Positives = 292/346 (84%), Gaps = 13/346 (3%)
Query: 158 MGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTG 217
MGSGIATAL+LSNYPV+LKEVN+KFL+AGI R++ANLQSRV+KGKMT+E +EKT+SLLTG
Sbjct: 1 MGSGIATALMLSNYPVLLKEVNDKFLDAGIDRIKANLQSRVRKGKMTKEIYEKTLSLLTG 60
Query: 218 VLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSK 277
V+DYE FKD A++ENV +KQQ+FADLE+YCP HC+LA+NTSTIDL+LIGE+T S+
Sbjct: 61 VVDYERFKD------AVVENVKVKQQVFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQ 114
Query: 278 DRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMF 337
DRI AHVMPLLEIVR+N TSPQV+VDLLD+GKKIKKTP+VVGNCTGFAVNRMF
Sbjct: 115 DRIA-------AHVMPLLEIVRSNHTSPQVVVDLLDVGKKIKKTPVVVGNCTGFAVNRMF 167
Query: 338 FPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERT 397
PYT A LLV+RG D+Y ID+ T+FGMPMGPFRL DLVGFGVA+A+GMQ++EN P
Sbjct: 168 SPYTSIALLLVDRGMDVYKIDQVCTEFGMPMGPFRLLDLVGFGVALASGMQYLENSPGSV 227
Query: 398 YKSMIIPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKL 457
KSM+IP+M EDKR GE ++KGFY Y+ RKA PDP++ K++EK+R M+G D + KL
Sbjct: 228 DKSMLIPLMFEDKRTGEASQKGFYKYEGNRKAIPDPDIFKYVEKSRRMAGTVPDLELLKL 287
Query: 458 SEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+K+IVEM+FFPV+NEAC+V +EGIA KA+DLDIAS+ GMGFPPYR
Sbjct: 288 DDKEIVEMVFFPVINEACQVLSEGIANKASDLDIASIFGMGFPPYR 333
>gi|303271069|ref|XP_003054896.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462870|gb|EEH60148.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 712
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 270/511 (52%), Positives = 351/511 (68%), Gaps = 25/511 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SKP+K EEA LGLVDA+ + L TA + ALDI E R
Sbjct: 160 MMLKSKPIKAEEALKLGLVDAIAPRDALTQTASKLALDIAEKR----------------A 203
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EA++IF AR A++ + HP++CID +EAG+ G GL E + F K + S CK
Sbjct: 204 EAKKIFAVARRGAKRVQKLMPHPMLCIDAIEAGINKGASEGLIVEQDAFAKAVSSAACKG 263
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA RGT+ VPGVTD+GLAPR +K V ++GGGLMGSGIATA +++ V+LKE+N+
Sbjct: 264 LVHFFFASRGTAAVPGVTDVGLAPRVMKCVGVVGGGLMGSGIATACVMNGVSVVLKEINQ 323
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AG+ RV+ANL S VKKG++TQ+K + + L Y +F VDM IEA+IEN+ L
Sbjct: 324 KFLDAGMSRVKANLASAVKKGRLTQQKADAMYANCHPTLSYGAFSKVDMAIEAVIENLGL 383
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IF+DLE C P IL++NTSTID+ + ++ + +RIVGAHFFSPAHVM L EI+RT
Sbjct: 384 KQKIFSDLESSCRPDAILSTNTSTIDITKVAQKMKNPERIVGAHFFSPAHVMQLFEIIRT 443
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ T PQV+VD L + K+IKKTP+VVGNCTGFAVNR+FFPYT +A LL++ G D Y ID A
Sbjct: 444 DITPPQVLVDTLGLSKQIKKTPVVVGNCTGFAVNRVFFPYTMSACLLLDLGCDPYAIDNA 503
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I FGMP+GPFRL DLVG V +A G FIE+FPER Y+ +IP + KR GE + GF
Sbjct: 504 IRMFGMPIGPFRLGDLVGHDVGVAVGSNFIEDFPERVYRCAMIPSLVASKRLGEKSGSGF 563
Query: 421 YLYDERRKASPDPE-VKKFIEKARS-------MSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
Y++ + + + PDPE + + +R+ S A D A L++ DIVEMIFFPVVN
Sbjct: 564 YVH-KGKTSLPDPEGIAPLLAASRANARSQLPASAFAADAPLAALTQSDIVEMIFFPVVN 622
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
EACR AEG+ V+A DLD A+++GMGFPP+R
Sbjct: 623 EACRCLAEGVVVRAGDLDTAAILGMGFPPFR 653
>gi|355388915|gb|AER62400.1| hypothetical protein [Brachypodium sp. D49c]
Length = 306
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 245/306 (80%), Positives = 276/306 (90%)
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
GEAREI KFARAQARKQA NL HP++CIDV+E G+VSGPRAGL KEA FQ LL S+TCK
Sbjct: 1 GEAREILKFARAQARKQAANLEHPLLCIDVIEEGIVSGPRAGLWKEATTFQVLLFSDTCK 60
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
SLVH+FF+QR TSKVPG TDLGL PR++ KVAILGGGLMGSGIATA+ILSNYPVILKEVN
Sbjct: 61 SLVHVFFSQRATSKVPGATDLGLMPRKITKVAILGGGLMGSGIATAMILSNYPVILKEVN 120
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
EKFL AGI R++ANLQSRV+KGKMT+E++EK +SL+TG L YE+FK+VD+VIEA+IENV
Sbjct: 121 EKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLVTGALGYENFKEVDLVIEAVIENVK 180
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
LKQQIFADLEKYCP HCILA+NTSTIDLNLIGE+T S+DRIVGAHFFSPAHVMPLLEIVR
Sbjct: 181 LKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVR 240
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
T TS QV+VDLLD+GK+IKKTPIVVGNCTGFAVNRMFFPYTQ+A L V+ G D+Y IDR
Sbjct: 241 TQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMFFPYTQSALLFVDYGMDVYKIDR 300
Query: 360 AITKFG 365
A TKFG
Sbjct: 301 ACTKFG 306
>gi|355388911|gb|AER62398.1| hypothetical protein [Aegilops speltoides subsp. speltoides]
Length = 304
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/303 (80%), Positives = 275/303 (90%)
Query: 49 TLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAED 108
+LYKTDK+EPLGEAREI KFARAQARKQA NL HP+VCIDV+E G+VSGPRAGL KEA
Sbjct: 2 SLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEEGIVSGPRAGLWKEANA 61
Query: 109 FQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL 168
FQ LL S+TCKSL+H+FF+QR TSKVPG TDLGL PR++ KVAILGGGLMGSGIATA+IL
Sbjct: 62 FQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAILGGGLMGSGIATAMIL 121
Query: 169 SNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVD 228
SNYPV+LKEVNEKFL AGI R++ANLQSRV+KGKMT+E++EK +SL+TG L YE FK+VD
Sbjct: 122 SNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLVTGALGYEKFKEVD 181
Query: 229 MVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSP 288
+VIEA+IENV LKQQIFADLEKYCP HCILA+NTSTIDLNLIGE+T S+DRIVGAHFFSP
Sbjct: 182 LVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQDRIVGAHFFSP 241
Query: 289 AHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLV 348
AHVMPLLEIVRT TS QV+VDLLD+GK+IKKTPIVVGNCTGFAVNRMFFPYTQ+A L V
Sbjct: 242 AHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMFFPYTQSALLFV 301
Query: 349 ERG 351
+ G
Sbjct: 302 DYG 304
>gi|302792393|ref|XP_002977962.1| hypothetical protein SELMODRAFT_176615 [Selaginella moellendorffii]
gi|300153983|gb|EFJ20619.1| hypothetical protein SELMODRAFT_176615 [Selaginella moellendorffii]
Length = 710
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/504 (49%), Positives = 340/504 (67%), Gaps = 1/504 (0%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MM+TSK +K +EAH GLVDA+ QL+ AR +A I P++ TL ++DK+EPL
Sbjct: 157 MMMTSKMIKAKEAHEAGLVDAICDYPQLIQFARNYAKGIANKTHPFLKTLERSDKLEPLH 216
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EA I AR +A+K ++ +P +C+ V+E G+ G G E + + + S K+
Sbjct: 217 EALHIIANARLRAKKTHKHVEYPFICLAVIEHGIHKGGTEGTIFERKMGVQTVDSLPAKA 276
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+HIF A+R KVP V+D L R VK V ++GGGLMGSGIATALI+ N V+LKEV+E
Sbjct: 277 LMHIFLAERTVYKVPNVSDGRLEARPVKTVGVIGGGLMGSGIATALIVHNVRVLLKEVDE 336
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+AGI RV+ANL+SRV KG M+Q +F++ + LL G +DY+ F+ ++VIEA+IE++ L
Sbjct: 337 ERLQAGINRVQANLKSRVSKGSMSQAEFQRALGLLVGTVDYKGFESANLVIEAVIESIPL 396
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K++IF +L+ C CILASNTS+ DLN I + +DRI+GAHFFSPAHVM LLEIVRT
Sbjct: 397 KKKIFGELDAICSRDCILASNTSSCDLNEITDGVSFRDRIIGAHFFSPAHVMRLLEIVRT 456
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ TS Q I DLL + KKI K P+VV N GFAVNR+FFPY + A LV+ G Y ID
Sbjct: 457 DSTSNQSICDLLALSKKIGKVPVVVQNAVGFAVNRVFFPYHRIAAFLVDLGVHPYRIDAV 516
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I FGMP+GPFRL DL G + F + F +R Y S + +M + R GE T KG+
Sbjct: 517 IKDFGMPIGPFRLGDLAGLQIGALVADTFKKEFGDRLYPSYMGTLMAKANRTGEATGKGY 576
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAK-LSEKDIVEMIFFPVVNEACRVFA 479
Y Y R+ P PE+ + +E++R ++G+ A+ +++KDIVEMIFFP+VNEACRV
Sbjct: 577 YNYHGTRQEHPAPELDEILEESRKLAGLNARGLTAEGITDKDIVEMIFFPIVNEACRVID 636
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E I ++A+DLD+ASV+GMGFP +R
Sbjct: 637 EKIVIRASDLDVASVLGMGFPAFR 660
>gi|302766729|ref|XP_002966785.1| hypothetical protein SELMODRAFT_439712 [Selaginella moellendorffii]
gi|300166205|gb|EFJ32812.1| hypothetical protein SELMODRAFT_439712 [Selaginella moellendorffii]
Length = 732
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/504 (49%), Positives = 340/504 (67%), Gaps = 1/504 (0%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MM+TSK +K +EAH GLVDA+ QL+ AR +A I P++ TL ++DK+EPL
Sbjct: 179 MMMTSKMIKAKEAHEAGLVDAICDYPQLIQFARNYAKGIANKTHPFLKTLERSDKLEPLH 238
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+A I AR +A+K ++ +P +C+ V+E G+ G G E + + + S K+
Sbjct: 239 KALHIIANARLRAKKTHKHVEYPFICLAVIEHGIHKGGIEGTIFERKMGVQTVDSLPAKA 298
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+HIF A+R KVP V+D L R VK V ++GGGLMGSGIATALI+ N V+LKEV+E
Sbjct: 299 LMHIFLAERTVYKVPNVSDGRLEARPVKTVGVIGGGLMGSGIATALIVHNVRVLLKEVDE 358
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+AGI RV+ANL+SRV KG M+Q +F++ + LL G +DY+ F+ ++VIEA+IE++ L
Sbjct: 359 ERLQAGINRVQANLKSRVSKGSMSQAEFQRALGLLVGTVDYKGFESANLVIEAVIESIPL 418
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K++IF +L+ C CILASNTS+ DLN I + +DRI+GAHFFSPAHVM LLEIVRT
Sbjct: 419 KKKIFGELDAICSRDCILASNTSSCDLNEITDGVSFRDRIIGAHFFSPAHVMRLLEIVRT 478
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ TS Q I DLL + KKI K P+VV N GFAVNR+FFPY + A LV+ G Y ID
Sbjct: 479 DSTSHQSICDLLALSKKIGKVPVVVQNAVGFAVNRVFFPYHRIAAFLVDLGVHPYRIDAV 538
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I FGMP+GPFRL DL G + F + F +R Y S + +M + R GE T KG+
Sbjct: 539 IKDFGMPIGPFRLGDLAGLQIGALVADTFEKEFGDRLYPSYMGTLMAKANRTGEATGKGY 598
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAK-LSEKDIVEMIFFPVVNEACRVFA 479
Y Y R+ P PE+ + +E++R ++G+ A+ +++KDIVEMIFFP+VNEACRV
Sbjct: 599 YNYHGTRQEHPAPELDEILEESRKLAGLNARGLTAEGITDKDIVEMIFFPIVNEACRVID 658
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E I ++A+DLD+ASV+GMGFP +R
Sbjct: 659 EKIVIRASDLDVASVLGMGFPAFR 682
>gi|424513537|emb|CCO66159.1| predicted protein [Bathycoccus prasinos]
Length = 730
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 269/514 (52%), Positives = 343/514 (66%), Gaps = 11/514 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKT 53
MML SK + EE LGLVD VV + +V A + A I + +L +T
Sbjct: 162 MMLQSKEITSEEGARLGLVDEVVEDDGKSGNDRAVVEAAVRVAKRIANGEKQRQFSLTRT 221
Query: 54 DKI-EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKL 112
DK+ + I A +A+K L H C++ V+ G+ G GL+KE+E FQK
Sbjct: 222 DKLPRDAKQTMGIMAVAEGKAKKIKAVLPHASYCVEAVKVGLEKGSAEGLRKESEMFQKA 281
Query: 113 LRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++S K LVH FFA R T+ VPG+TD L P VK V ++GGGLMGSGIATA +LS
Sbjct: 282 VKSPAAKGLVHFFFASRATASVPGITDQKLRPSEVKSVGVVGGGLMGSGIATACLLSGME 341
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
V+LKE+ +FL+AGI R+ AN+ S VKKGKM EK + + + G LD F +VDMVIE
Sbjct: 342 VVLKEIKPEFLQAGIQRIEANIGSMVKKGKMKPEKAKAIVGRVRGTLDDRDFANVDMVIE 401
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A+IEN+ LK++IF+ LE P CIL++NTSTI + + +R++GAHFFSPAHVM
Sbjct: 402 AVIENLDLKRKIFSTLESIVKPSCILSTNTSTISIAKCASEMRNPERLIGAHFFSPAHVM 461
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
L EI+R +QT PQ++VD L KKIKKTP+VVGNCTGF VNR+FFPYT +A +LV+ G
Sbjct: 462 QLFEIIRVDQTPPQILVDTLAFSKKIKKTPVVVGNCTGFCVNRVFFPYTMSATVLVDLGC 521
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRA 412
D Y IDR I+ FGMPMGPFRLADLVG V + G FIE+FPER Y+S +IP + + KR
Sbjct: 522 DPYAIDRVISMFGMPMGPFRLADLVGMEVGVHVGKNFIEDFPERVYESPLIPSLLDAKRL 581
Query: 413 GETTRKGFYLYDERRKASPDPE-VKKFIEKARSMSGVAI--DPKFAKLSEKDIVEMIFFP 469
GE T+ GFY YD+RRKASPD + + FIE AR V + P+ S +DIVEMIFFP
Sbjct: 582 GEKTKSGFYSYDDRRKASPDMDAIAPFIENARKNRKVPLPGHPEQLGFSAQDIVEMIFFP 641
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
VVNEACRV EG+AVKAAD+D+ASV+GMGFPP+R
Sbjct: 642 VVNEACRVLDEGVAVKAADVDVASVLGMGFPPFR 675
>gi|308802091|ref|XP_003078359.1| putative tetrafunct (ISS) [Ostreococcus tauri]
gi|116056811|emb|CAL53100.1| putative tetrafunct (ISS) [Ostreococcus tauri]
Length = 1573
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/420 (55%), Positives = 306/420 (72%), Gaps = 4/420 (0%)
Query: 97 GPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGG 156
GP AGLQ+E +F+K + S K LVH FFAQR T+ VPGVTD GL PR +K V ++GGG
Sbjct: 1105 GPEAGLQREPVNFKKAVSSPAAKGLVHFFFAQRATNIVPGVTDGGLKPRVMKSVGVVGGG 1164
Query: 157 LMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLT 216
LMGSGIATA +L+ V+LKE+ ++FL+AG+GR+++NL S V+KG+MT++K K +SL+
Sbjct: 1165 LMGSGIATACLLAGIGVVLKEIKQEFLDAGVGRIQSNLASMVRKGRMTEDKARKLMSLVK 1224
Query: 217 GVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYS 276
L + F+ DMVIEA+IEN+ LKQ+IF +LEK C P CIL++NTSTID+ I + +
Sbjct: 1225 PTLSDDDFRQCDMVIEAVIENLDLKQKIFCNLEKICRPDCILSTNTSTIDITKIATKMKN 1284
Query: 277 KDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRM 336
+RIVGAHFFSPAHVM L EI+RT T Q++VD L + K+I+KTP+VVGNCTGFAVNR+
Sbjct: 1285 PERIVGAHFFSPAHVMQLFEIIRTKDTPSQILVDTLGLSKQIRKTPVVVGNCTGFAVNRV 1344
Query: 337 FFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER 396
FFPYT +A LV+ G D Y IDRAI FGMPMGPFRL DLVG V + G FI++FP+R
Sbjct: 1345 FFPYTMSATALVDIGCDPYAIDRAIMMFGMPMGPFRLGDLVGHDVGVHVGKNFIDDFPDR 1404
Query: 397 TYKSMIIPIMQEDKRAGETTRKGFYLYDERRKASPDPE-VKKFIEKARSMSGVAIDPKF- 454
Y+S +IP + KR GE + GFY YD +R+A+PDPE V+ I +R+ + + +D
Sbjct: 1405 VYQSPLIPSLLASKRLGEKSGAGFYKYDNKRRATPDPEGVEGLIAASRAQTRLPLDGSSI 1464
Query: 455 -AKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFS 513
L+ ++I EMIFFPVVNEACRV EGI VKA D+D AS++GMGFP +R +H G S
Sbjct: 1465 PNGLTPQEIAEMIFFPVVNEACRVLDEGIVVKAGDIDTASILGMGFPAFRG-GIVHWGDS 1523
>gi|413925843|gb|AFW65775.1| hypothetical protein ZEAMMB73_546088 [Zea mays]
Length = 407
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/346 (58%), Positives = 262/346 (75%)
Query: 158 MGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTG 217
MGSGIAT+L++SN V+LKEVN +FL+ G + NL+ VK+G +T+++ K ++LL G
Sbjct: 1 MGSGIATSLLVSNISVVLKEVNPQFLQRGEKTIAGNLEGLVKRGSLTKDRMHKAMALLKG 60
Query: 218 VLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSK 277
LDY FKDVDMVIEA+IE + LKQ IFAD+EK CP HCILA+NTSTIDLN++G++T S+
Sbjct: 61 ALDYSDFKDVDMVIEAVIEKIPLKQSIFADIEKICPKHCILATNTSTIDLNVVGKKTNSQ 120
Query: 278 DRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMF 337
DRI+GAHFFSPAH+MPLLEIVRT +TSPQ I+DL+ IGK IKK PIVVGNCTGFAVN F
Sbjct: 121 DRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITIGKIIKKVPIVVGNCTGFAVNLTF 180
Query: 338 FPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERT 397
FPYTQ + LLV G D++ IDR I+ FGMPMGPF+L D+ G+GVA+A + + F ER
Sbjct: 181 FPYTQGSHLLVSLGIDVFRIDRVISTFGMPMGPFQLQDVAGYGVALAVKDIYADAFGERN 240
Query: 398 YKSMIIPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKL 457
S ++ +M +D R G+ KG+Y+Y++ K PDP VK IE+ R + K L
Sbjct: 241 LDSDLVDLMVKDGRQGKVNGKGYYIYEKGGKPKPDPSVKHVIEEYRKHANTMPGGKPVTL 300
Query: 458 SEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+++DI+EMIFFPVVNEACRV E + ++A+DLDIASV+GMGFP YR
Sbjct: 301 TDQDILEMIFFPVVNEACRVMDENVVIRASDLDIASVLGMGFPKYR 346
>gi|452820125|gb|EME27172.1| peroxisomal fatty acid beta-oxidation multifunctional protein
[Galdieria sulphuraria]
Length = 1153
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/548 (43%), Positives = 345/548 (62%), Gaps = 29/548 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVV-APNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
+ML +K +KG+EA+ LGL+ A+V +L++TA++ AL+I + R L +TDK+
Sbjct: 162 VMLQTKVLKGQEANKLGLLAALVDGEEELLATAKKVALEIAQGLRERKNHLKRTDKLGSP 221
Query: 60 GEAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ +I +FAR++ K P C++ + GV +G AGLQ E F++L+ S T
Sbjct: 222 EQWNKIEQFARSELSKSKMIKGQPQYQECLETIMYGVRNGGEAGLQYERRKFRELVSSPT 281
Query: 118 CKSLVHIFFAQRGTSK---VPGVTD--LGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
KSL+H+FFA R TSK +PGV+ G P KK A++GGGLMGSGIAT+++ P
Sbjct: 282 AKSLIHVFFATRATSKLDAIPGVSTEYKGKLP---KKCAVVGGGLMGSGIATSILACGIP 338
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYES-FKDVDMVI 231
V++KEV+E+F +A R+ ANL+S K+ K++QE +LT +++ F+DVD+VI
Sbjct: 339 VVVKEVDEQFAKAARTRIEANLESFRKRSKLSQEALNNAKRILTVTTEFDDKFRDVDLVI 398
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGE---RTYSKDRIVGAHFFSP 288
EA IE+V LKQ+IFA L K P CILA+NTS+ID++LI + + R+VGAHFFSP
Sbjct: 399 EAAIEDVRLKQEIFATLGKLVKPDCILATNTSSIDIDLIATACPKATEEGRVVGAHFFSP 458
Query: 289 AHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLV 348
AH+M LLEIVR N+TS +VI DL+ +GKK+ KTPIVVGNC GFAVNRM+FP + + +LV
Sbjct: 459 AHIMQLLEIVRINRTSARVIQDLVTLGKKMGKTPIVVGNCVGFAVNRMYFPQSNVSDILV 518
Query: 349 ER-GTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQ 407
G Y ID+ +FG+PMGPF+L DLVGF V++A G + +R ++S ++ M
Sbjct: 519 TYLGLCPYRIDQVAEEFGLPMGPFKLRDLVGFDVSVAVGGVAEVAYADRVFRSSLLKSMI 578
Query: 408 EDKRAGETTRKGFYLY-DERRKASPDPE-VKKFIEKARS---MSGVAIDPK------FAK 456
E R G+ + GFY Y + R+ D E VK FIE A + +D +
Sbjct: 579 EKGRKGQKSGAGFYRYSSQSRQPQKDEESVKSFIEAASKEVRQTASKLDIRAPEQSFIQN 638
Query: 457 LSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR--FVTFIHRGFSK 514
+ + DI++M+ PVVNE RV EGI+ +A+DLDIASV+GMGFP Y+ + + F
Sbjct: 639 IKDNDIIDMLILPVVNEGMRVLEEGISQRASDLDIASVLGMGFPAYKGGIMFWAQSQFGH 698
Query: 515 SSSCFKNL 522
S + K L
Sbjct: 699 SGAILKRL 706
>gi|449470586|ref|XP_004152997.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like [Cucumis sativus]
Length = 501
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/245 (79%), Positives = 222/245 (90%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKPVKGEEA SLGLVDA+V +L+S AR+WALDI E R+PW+ +L+KT+K+E L
Sbjct: 228 MMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKPWIISLHKTNKLESLA 287
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+AREIFKFARAQ RKQAPNL HP+VCIDVVE GVVSGPRAGLQKE EDFQ LL ++T KS
Sbjct: 288 DAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTSKS 347
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FFAQRGT+KVPGV+DLGL PRR+ KVA++GGGLMGSGIATALILSNYPVILKEVNE
Sbjct: 348 LIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEVNE 407
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFLEAG+GRV+ANLQSRV+KG MT EKFE+TISLL GVLDYESFKDVDMVIEA+IEN+SL
Sbjct: 408 KFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFKDVDMVIEAVIENISL 467
Query: 241 KQQIF 245
KQQI
Sbjct: 468 KQQII 472
>gi|449474069|ref|XP_004154065.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 337
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/245 (79%), Positives = 222/245 (90%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKPVKGEEA SLGLVDA+V +L+S AR+WALDI E R+PW+ +L+KT+K+E L
Sbjct: 64 MMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKPWIISLHKTNKLESLA 123
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+AREIFKFARAQ RKQAPNL HP+VCIDVVE GVVSGPRAGLQKE EDFQ LL ++T KS
Sbjct: 124 DAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTSKS 183
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FFAQRGT+KVPGV+DLGL PRR+ KVA++GGGLMGSGIATALILSNYPVILKEVNE
Sbjct: 184 LIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEVNE 243
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFLEAG+GRV+ANLQSRV+KG MT EKFE+TISLL GVLDYESFKDVDMVIEA+IEN+SL
Sbjct: 244 KFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFKDVDMVIEAVIENISL 303
Query: 241 KQQIF 245
KQQI
Sbjct: 304 KQQII 308
>gi|449473562|ref|XP_004153917.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 415
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/245 (79%), Positives = 222/245 (90%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKPVKGEEA SLGLVDA+V +L+S AR+WALDI E R+PW+ +L+KT+K+E L
Sbjct: 85 MMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKPWIISLHKTNKLESLA 144
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+AREIFKFARAQ RKQAPNL HP+VCIDVVE GVVSGPRAGLQKE EDFQ LL ++T KS
Sbjct: 145 DAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTSKS 204
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FFAQRGT+KVPGV+DLGL PRR+ KVA++GGGLMGSGIATALILSNYPVILKEVNE
Sbjct: 205 LIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEVNE 264
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFLEAG+GRV+ANLQSRV+KG MT EKFE+TISLL GVLDYESF+DVDMVIEA+IEN+SL
Sbjct: 265 KFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFEDVDMVIEAVIENISL 324
Query: 241 KQQIF 245
KQQI
Sbjct: 325 KQQII 329
>gi|449475201|ref|XP_004154403.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 444
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/245 (79%), Positives = 222/245 (90%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKPVKGEEA SLGLVDA+V +L+S AR+WALDI E R+PW+ +L+KT+K+E L
Sbjct: 171 MMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKPWIISLHKTNKLESLA 230
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+AREIFKFARAQ RKQAPNL HP+VCIDVVE GVVSGPRAGLQKE EDFQ LL ++T KS
Sbjct: 231 DAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTSKS 290
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FFAQRGT+KVPGV+DLGL PRR+ KVA++GGGLMGSGIATALILSNYPVILKEVNE
Sbjct: 291 LIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEVNE 350
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFLEAG+GRV+ANLQSRV+KG MT EKFE+TISLL GVLDYESFKDVDMVIEA+IEN+SL
Sbjct: 351 KFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFKDVDMVIEAVIENISL 410
Query: 241 KQQIF 245
KQQI
Sbjct: 411 KQQII 415
>gi|449471586|ref|XP_004153352.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 332
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/240 (79%), Positives = 218/240 (90%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKPVKGEEA SLGLVDA+V +L+S AR+WALDI E R+PW+ +L+KT+K+E L
Sbjct: 93 MMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKPWIISLHKTNKLESLA 152
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+AREIFKFARAQ RKQAPNL HP+VCIDVVE GVVSGPRAGLQKE EDFQ LL ++T KS
Sbjct: 153 DAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTSKS 212
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FFAQRGT+KVPGV+DLGL PRR+ KVA++GGGLMGSGIATALILSNYPVILKEVNE
Sbjct: 213 LIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEVNE 272
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFLEAG+GRV+ANLQSRV+KG MT EKFE+TISLL GVLDYESFKDVDMVIEA+IEN+SL
Sbjct: 273 KFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFKDVDMVIEAVIENISL 332
>gi|115463427|ref|NP_001055313.1| Os05g0362100 [Oryza sativa Japonica Group]
gi|54287655|gb|AAV31399.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
protein [Oryza sativa Japonica Group]
gi|113578864|dbj|BAF17227.1| Os05g0362100 [Oryza sativa Japonica Group]
gi|215712327|dbj|BAG94454.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 465
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/290 (63%), Positives = 238/290 (82%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L SKP+KG EAH GLVDAVV+ ++L+STA WAL+I+E +RPW +L++TD++ L
Sbjct: 159 MLLMSKPLKGVEAHKFGLVDAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALE 218
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E ++I FAR QA+KQ+ +L HP+VCIDV+E G++SGPRAGL KE + L S+ KS
Sbjct: 219 ETKKILNFARVQAQKQSASLQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKS 278
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+FFAQR TSK+P ++ LGL PRR+ KVAI+GGGLMGSGIATALI +N VILKEVNE
Sbjct: 279 LRHVFFAQRATSKIPNISILGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNE 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+AGI RV+ANLQS VK+G+MT+E +E +SLL+GVLDYE F++ D+VIEA+IE++SL
Sbjct: 339 QFLDAGISRVKANLQSLVKRGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSL 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAH 290
KQ+IFADLEKYC +CILA+NTSTIDL+LIG++T +DRI GAHFFSP +
Sbjct: 399 KQKIFADLEKYCHSNCILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPCN 448
>gi|449474245|ref|XP_004154116.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 327
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/244 (74%), Positives = 206/244 (84%), Gaps = 18/244 (7%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
TSKPVKGEEA SLGLVDA+ E R+PW+ +L+KT+K+E L +AR
Sbjct: 75 TSKPVKGEEAFSLGLVDAI------------------ERRKPWIISLHKTNKLESLADAR 116
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
EIFKFARAQ RKQAPNL HP+VCIDVVE GVVSGPRAGLQKE EDFQ LL ++T KSL+H
Sbjct: 117 EIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTSKSLIH 176
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+FFAQRGT+KVPGV+DLGL PRR+ KVA++GGGLMGSGIATALILSNYPVILKEVNEKFL
Sbjct: 177 VFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEVNEKFL 236
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
EAG+GRV+ANLQSRV+KG MT EKFE+TISLL GVLDYESFKDVDMVIEA+IEN+SLKQQ
Sbjct: 237 EAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFKDVDMVIEAVIENISLKQQ 296
Query: 244 IFAD 247
I
Sbjct: 297 IIVS 300
>gi|17065148|gb|AAL32728.1| fatty acid multifunctional protein (AtMFP2) [Arabidopsis thaliana]
Length = 404
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 169/232 (72%), Positives = 206/232 (88%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LTSKPVK EE HSLGL+DAVV P +LV+TAR+WALDI+ R+PWV+++ KTDK+ PLG
Sbjct: 166 MILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLG 225
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI FA+AQ K+APN+ HP++C+D +E G+VSGPRAGL+KEAE ++++ +T K
Sbjct: 226 EAREILTFAKAQTLKRAPNMKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKG 285
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FF+QRGT+KVPGVTD GL PR++KKVAI+GGGLMGSGIATALILSNYPVILKEVNE
Sbjct: 286 LIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
KFLEAGIGRV+ANLQSRV+KG M+QEKFEKT+SLL G LDYESF+DVDMVIE
Sbjct: 346 KFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIE 397
>gi|118488579|gb|ABK96102.1| unknown [Populus trichocarpa]
Length = 335
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 163/275 (59%), Positives = 219/275 (79%)
Query: 229 MVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSP 288
MVIEA+IE+V LKQ+IF+++EK CPPHCILA+NTSTIDLNL+GE+T S+DRI+GAHFFSP
Sbjct: 1 MVIEAVIESVPLKQKIFSEIEKICPPHCILATNTSTIDLNLVGEKTSSQDRIIGAHFFSP 60
Query: 289 AHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLV 348
AH+MPLLEIVRT +TS Q I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ+A +LV
Sbjct: 61 AHIMPLLEIVRTEKTSAQAILDLMTVGKTIKKVPVVVGNCTGFAVNRAFFPYTQSALILV 120
Query: 349 ERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQE 408
G D++ ID+ I+ FG+PMGP++L DL G+GVA+A +F FP+RT++S +I ++ +
Sbjct: 121 HLGVDVFRIDKLISSFGLPMGPYQLQDLSGYGVALAVEKEFANAFPDRTFQSPLIHLLVK 180
Query: 409 DKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFF 468
R G+T KG+Y+Y++ K PDP V IE++R ++ + + K +++K+IVEM+ F
Sbjct: 181 SGRNGKTNGKGYYIYEKGSKPRPDPSVLPIIEESRRLANIMPNGKPINITDKEIVEMVLF 240
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
PVVNEACRV EG+ V+A+DLD ASV+GM FP YR
Sbjct: 241 PVVNEACRVLDEGVVVRASDLDTASVLGMSFPSYR 275
>gi|159482618|ref|XP_001699366.1| hypothetical protein CHLREDRAFT_132158 [Chlamydomonas reinhardtii]
gi|158273002|gb|EDO98796.1| predicted protein [Chlamydomonas reinhardtii]
Length = 705
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 229/525 (43%), Positives = 298/525 (56%), Gaps = 59/525 (11%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTS P+K E G+ P + + RP ++T DK+ PLG
Sbjct: 162 MMLTSAPIKAEGREGRGIPALFRCPPPPYHSPLPLPPFLHSLHRPSLSTPSPPDKLPPLG 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EA + ARA+A ++A L HP +C+D V+AGV G + GL E F +T K+
Sbjct: 222 EALALLDMARAEAGRRARGLAHPQLCLDAVQAGVERGGQEGLAAEGRAFAAAAALDTHKA 281
Query: 121 LVHIFFAQRGTSKVPGVTDL-GLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
LVHIFFAQR T KV GVTD+ GL PR ++ VA+LGGGLMGSGIATAL L+ VILKEV
Sbjct: 282 LVHIFFAQRATKKVKGVTDVPGLKPRPIRCVAVLGGGLMGSGIATALALAGVEVILKEV- 340
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
KKG M+Q + + ++G LDY F DMVIEA+IE++
Sbjct: 341 -------------------KKGAMSQAAADAALGRVSGALDYAGFARADMVIEAVIEDIP 381
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGER----TYSKDRIVGAHFFSPAHVMPLL 295
LKQ+IFADLEK C P IL++NTSTID+ L+G + ++ R++GAHFFSPAH+MPLL
Sbjct: 382 LKQKIFADLEKACRPDAILSTNTSTIDIELVGAKMSGGAAARRRLLGAHFFSPAHIMPLL 441
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCT-GFAVNRMFFPYTQAAFLL------- 347
EIVRT T QV G C G R + + L+
Sbjct: 442 EIVRTKDTGAQVGA---------------WGACGRGLRGRRAVVEWARRGLLVEAHACDR 486
Query: 348 ---VERGTDLYLIDRAITKFGMPMGPF-RLADLVGFGVAIATGMQFIENFPERTYKSMII 403
+E + + A + P+ P +L DLVG + + G F+ +FP+R Y S +I
Sbjct: 487 TPQLENSRNTRWVTVATERITAPVHPLLQLNDLVGSDIGLHVGANFVTSFPDRVYVSRLI 546
Query: 404 PIMQEDKRAGETTRKGFYLYDER-RKASPDPE-VKKFIEKARSMSGVAIDPKFAK---LS 458
P + E KR GE T KGFY +D + RKASPDPE + +E +R + A+ P AK LS
Sbjct: 547 PALNEAKRLGEKTGKGFYKFDAKTRKASPDPEGLAPLLEGSRREA--ALVPAGAKPPALS 604
Query: 459 EKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++DI++ IFFPVVNE CRV AEGI KAADLD+ASVM MGFPP R
Sbjct: 605 DQDILDWIFFPVVNEGCRVVAEGIVDKAADLDVASVMAMGFPPVR 649
>gi|223946607|gb|ACN27387.1| unknown [Zea mays]
Length = 269
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 164/212 (77%), Positives = 188/212 (88%)
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
MPLLEIVRT TSPQV+VDLLD+GKKIKKTPIVVGNCTGFAVNRMFFPYTQ+A V+ G
Sbjct: 1 MPLLEIVRTQHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQSALFYVDLG 60
Query: 352 TDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKR 411
D+Y IDRA TKFGMPMGPFRLADLVGFGVA+ATGMQ++ENFPER YKSM++P+M E R
Sbjct: 61 MDVYKIDRACTKFGMPMGPFRLADLVGFGVAVATGMQYLENFPERVYKSMLLPLMMEGNR 120
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
AGE T+KGFY Y+ +RKA+PDPE+ K+IEK+RSM+GV DP+ KLSEKDIVEM+FFPV+
Sbjct: 121 AGEATQKGFYKYEGKRKATPDPEIMKYIEKSRSMAGVTPDPELMKLSEKDIVEMVFFPVI 180
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NEACRV EGIAVKA+DLDIAS+ GMGFPPYR
Sbjct: 181 NEACRVLDEGIAVKASDLDIASIFGMGFPPYR 212
>gi|449019169|dbj|BAM82571.1| fusion protein of glyoxysomal fatty acid oxidation tetrafunctional
protein, and acetyl-CoA acyltransferase [Cyanidioschyzon
merolae strain 10D]
Length = 1145
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 219/518 (42%), Positives = 294/518 (56%), Gaps = 31/518 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILE-----HRRPWVATLYKTDK 55
M++ S+ + GEEAH GLVD +V ++ + R+ LE + P L +TDK
Sbjct: 160 MIMHSRIIDGEEAHRCGLVDRLVPASRRETLLREACAVALEVASDPQKMPP-PLLTRTDK 218
Query: 56 IEPLGEAREIFKF-ARAQARKQAPNLTHPIVCIDVVEAGVV-SGPRAGLQKEAEDFQKLL 113
+ + K+ RA +Q C+ V G+ G AG EAE F++
Sbjct: 219 LGNADVEKIRSKYLPRAVEMRQKTGQIQFESCVRAVLEGIERGGGDAGWALEAELFRQCA 278
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPR--RVKKVAILGGGLMGSGIATALILSNY 171
SE ++L+H+F A R T VT+ P + VA++GGGLMGSGIA ++ +
Sbjct: 279 ASEASRALIHVFLASRRT-----VTNFKAEPHLHEPRTVAVIGGGLMGSGIAACILQNGG 333
Query: 172 PVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVI 231
V+LKEVNE L A I R+ A L + + + TI D + F DVD+V+
Sbjct: 334 RVVLKEVNENALAAAIQRIEAILSRAKVDTADARRRLQGTIEF-----DKKLFSDVDLVV 388
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGE---RTYSKDRIVGAHFFSP 288
EA +ENV KQ IF L + PHCILA+NTSTI+L+LIGE + + + R++GAHFFSP
Sbjct: 389 EAAVENVQAKQGIFRSLAECTGPHCILATNTSTINLDLIGEAIPQVHKEGRLIGAHFFSP 448
Query: 289 AHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLV 348
AHVMPLLEIVR N+T + + +L K ++KTPI+VGNC GFAVNRM+FP TQ AF L
Sbjct: 449 AHVMPLLEIVRANRTRNRAVQMVLAFAKHLRKTPIIVGNCAGFAVNRMYFPQTQMAFFLT 508
Query: 349 ER-GTDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIM 406
E G Y IDRA + G+PMGPF LADLVG + + F ++PER I +
Sbjct: 509 EYLGIHPYDIDRACQEVLGLPMGPFGLADLVGLDICDSVNQVFSMSYPERVCSLSIAGKL 568
Query: 407 QEDKRAGETTRKGFYLYD-ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEM 465
E R G+ + GFY Y + RK D E+ + ++ + P L+ DIV+M
Sbjct: 569 IEMGRKGQKSGAGFYRYGADHRKPIEDREMLDPL-----LASMTPPPLREPLTPLDIVQM 623
Query: 466 IFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
IFFPVVNEA RV E IA KAADLD+ASV+G GFP YR
Sbjct: 624 IFFPVVNEAMRVLEERIADKAADLDVASVLGYGFPAYR 661
>gi|398806814|ref|ZP_10565713.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. CF318]
gi|398087179|gb|EJL77776.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. CF318]
Length = 702
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/509 (38%), Positives = 292/509 (57%), Gaps = 17/509 (3%)
Query: 1 MMLTSKPVKGE---EAHSLGLVDAVVA-PNQLVSTARQWALDILEHRR-PWVATLYKTDK 55
M+++ +PVK E + L D + A P L A +A + + R P V L
Sbjct: 152 MIVSGEPVKSELLAQIPGQKLFDKLAASPESLAQEALAFAQSVSDTRPLPLVRELRAK-- 209
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
P G+A F+FAR + A N P+ C+D VEA G+ E E F L+ +
Sbjct: 210 -HPNGDA--YFQFARNMVKGMAKNFPAPLKCVDAVEAATKKKFEEGMALEREFFINLMWT 266
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++L HIF A+R SK+P V + R + VA++G G MG GIA + + PV +
Sbjct: 267 PESRALRHIFMAERAASKIPDVPE-DTPKREINSVAVIGAGTMGGGIAMNFLNAGVPVKI 325
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E+ ++ L+ GIG ++ N +++VKKGK+ Q+K+E+ +SLL+ L Y+ KD DMVIEA+
Sbjct: 326 LEMKQEALDKGIGIIKKNYEAQVKKGKLKQDKYEQRMSLLSTTLSYDDLKDADMVIEAVF 385
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E++ +K+++F +L++ P ILASNTST+D+N I T +VG HFFSPA+VM LL
Sbjct: 386 EDMGVKEKVFKELDRVMKPGAILASNTSTLDVNQIAAFTKRPQDVVGMHFFSPANVMKLL 445
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR +T V+ ++ +GKKIKKT +V G C GF NRM Y + L++ G
Sbjct: 446 EVVRGAKTGKDVLATVMAVGKKIKKTAVVSGVCDGFIGNRMIEQYGRQGGFLLDEGCTPE 505
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+AI KFG MGPFR+ DL G + A + P+ Y S ++ E R G+
Sbjct: 506 QVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRYTEKPDMKY-SKTADLLCEKGRFGQK 564
Query: 416 TRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T G+Y Y +R A P+ EV K IE R+ G I P+ K+S+++IV+ + F +VNEA
Sbjct: 565 TGAGWYDYVPGKRDAIPNAEVVKMIEDHRASLG--ITPR--KISDEEIVQRLVFSLVNEA 620
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA KA+D+D+ +MG GFP YR
Sbjct: 621 AHILEEGIASKASDIDMVYIMGYGFPVYR 649
>gi|385333682|ref|YP_005887633.1| fatty oxidation complex alpha subunit [Marinobacter adhaerens HP15]
gi|311696832|gb|ADP99705.1| fatty oxidation complex alpha subunit [Marinobacter adhaerens HP15]
Length = 702
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 193/509 (37%), Positives = 293/509 (57%), Gaps = 19/509 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ T + V ++A +LG++DAV + + + +A +++ +P TDKIE
Sbjct: 157 MITTGEFVGAKDALALGILDAVEEGDDIRAVGMAYAQKVVDEGKPVRRVRDITDKIEA-D 215
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ ++F R + +K+A L P C+D VEA G+++E E F + + S
Sbjct: 216 KGSDVFDQFRDELKKRARGLFSPFKCVDAVEAAFNLPFDEGMKRERELFMECMESPQRAG 275
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FF +R SKV G++ R VK V I+G G MG GIA + PV + EV +
Sbjct: 276 LIHSFFGEREVSKVKGLSK-DTPVRDVKSVGIIGAGTMGGGIAMNFVNVGIPVTIVEVKQ 334
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+ +R N ++ KKGK+TQE+ E+ ++L+T L Y+ F+DVD+VIEA+ EN+++
Sbjct: 335 EALDKGLAIIRRNYENSAKKGKLTQEQVEQRMALITPSLTYDDFRDVDLVIEAVFENMAI 394
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K++IFA L++ C P ILASNTST+D++ I T + +VG HFFSPA+VM LLE VR
Sbjct: 395 KKEIFAKLDEVCKPGAILASNTSTLDIDEIASATKRPEDVVGMHFFSPANVMKLLENVRG 454
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TS +V ++ + KKIKK ++VGNC GF NRM A LV+ G +D+
Sbjct: 455 SKTSDEVKATVMAVAKKIKKVGVMVGNCYGFVGNRMLHKRGTEAMSLVDEGATPQQVDKV 514
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDK-----RAGET 415
+T G PMG F ++DL G V G + E ER IP DK R G+
Sbjct: 515 LTDLGFPMGQFAMSDLAGIDV----GYRIRE---ERRKAGEDIPASWMDKLAEQGRLGQK 567
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T+ G Y Y+E RK PDPEV++ IE+ R G I P+ +++ ++I+E + ++NE
Sbjct: 568 TQAGVYKYEEGSRKPIPDPEVEQLIEQFRKEQG--ITPR--EITNQEILERCVYVMINEG 623
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ EGIA + D+DI + G GFP YR
Sbjct: 624 AKILEEGIADRPLDIDIVWIYGYGFPAYR 652
>gi|449534464|ref|XP_004174182.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 191
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 153/190 (80%), Positives = 174/190 (91%)
Query: 43 RRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGL 102
R+PW+ +L+KT+K+E L +AREIFKFARAQ RKQAPNL HP+VCIDVVE GVVSGPRAGL
Sbjct: 2 RKPWIISLHKTNKLESLADAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGL 61
Query: 103 QKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGI 162
QKE EDFQ LL ++T KSL+H+FFAQRGT+KVPGV+DLGL PRR+ KVA++GGGLMGSGI
Sbjct: 62 QKEIEDFQVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGI 121
Query: 163 ATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYE 222
ATALILSNYPVILKEVNE FLEAG+GRV+ANLQSRV+KG MT EKFE+TISLL GVLDYE
Sbjct: 122 ATALILSNYPVILKEVNENFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYE 181
Query: 223 SFKDVDMVIE 232
SFKDVDMVIE
Sbjct: 182 SFKDVDMVIE 191
>gi|358451689|ref|ZP_09162122.1| peroxisomal bifunctional enzyme [Marinobacter manganoxydans MnI7-9]
gi|357224158|gb|EHJ02690.1| peroxisomal bifunctional enzyme [Marinobacter manganoxydans MnI7-9]
Length = 697
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/509 (37%), Positives = 291/509 (57%), Gaps = 19/509 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ T + V +A +LG++DAV + + + +A +++ +P TDKI+
Sbjct: 152 MITTGEFVGANDALALGILDAVEEGDDIRAVGMAYAQKVVDEGKPVRRVRDITDKIDA-D 210
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ ++F R + +K+A L P C+D VEA G+++E E F + + S
Sbjct: 211 KGSDVFDQFRDELKKRARGLFSPFKCVDAVEAAFNLPFDEGMKRERELFMECMESPQRAG 270
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FF +R SKV G+ R VK V I+G G MG GIA + PV + EV +
Sbjct: 271 LIHSFFGEREVSKVKGLPK-DTPVRDVKSVGIIGAGTMGGGIAMNFVNVGIPVTIVEVKQ 329
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ +R N ++ KKGK+TQE+ E+ ++L+T L Y+ F+DVD+VIEA+ E++++
Sbjct: 330 DALDKGLAIIRRNYENSAKKGKLTQEQVEQRMALITTSLTYDDFRDVDLVIEAVFEDMAI 389
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K++IFA L++ C P ILASNTST+D++ I T + +VG HFFSPA+VM LLE VR
Sbjct: 390 KKEIFAKLDEVCKPGAILASNTSTLDIDEIASATKRPEDVVGMHFFSPANVMKLLENVRG 449
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TS +V ++ + KKIKK ++VGNC GF NRM A LV+ G +D+
Sbjct: 450 SKTSDEVKATVMAVAKKIKKVGVMVGNCYGFVGNRMLHKRGTEAMSLVDEGATPQQVDKV 509
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDK-----RAGET 415
+T G PMG F ++DL G V G + E ER IP DK R G+
Sbjct: 510 LTDLGFPMGQFAMSDLAGIDV----GYRIRE---ERRKAGEDIPASWMDKLAEQGRLGQK 562
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T+ G Y Y+E RK PDPEV++ IE+ R G I P+ ++S+++I+E + ++NE
Sbjct: 563 TQAGVYKYEEGSRKPIPDPEVEQLIEQFRKEQG--ITPR--EISDQEILERCVYVMINEG 618
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ EGIA + D+DI + G GFP YR
Sbjct: 619 AKILEEGIADRPLDIDIVWIYGYGFPAYR 647
>gi|91788435|ref|YP_549387.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. JS666]
gi|91697660|gb|ABE44489.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. JS666]
Length = 699
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 197/510 (38%), Positives = 291/510 (57%), Gaps = 19/510 (3%)
Query: 1 MMLTSKPVKGE---EAHSLGLVDAVVA-PNQLVSTARQWALDILEHRR-PWVATLYKTDK 55
M+++ +PVK E + L D + A P L A +A I + R P V L
Sbjct: 152 MIVSGEPVKSELLAQIPGQKLFDRMAASPESLAEDALAFAQSIADTRPLPLVRNLPCK-- 209
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
P G+A F+FAR + A N P+ C+D VEA GL E E F L+ +
Sbjct: 210 -HPDGDA--YFQFARNMVKGMAKNFPAPLKCVDAVEAATKKKFEDGLAFERELFINLMWT 266
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRR-VKKVAILGGGLMGSGIATALILSNYPVI 174
++L HIF A+R SK+P V + PRR +K +A++G G MG GI+ + + PV
Sbjct: 267 PESRALRHIFMAERAASKIPDVPED--TPRREIKSIAVIGAGTMGGGISMNFLNAGIPVK 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ E+ ++ L+ GI +R N +S+VKKGK+ Q+K+E+ +SLL+ L Y+ KD DMVIEA+
Sbjct: 325 ILEMKQEALDRGIATIRKNYESQVKKGKLKQDKYEQRMSLLSTTLSYDDLKDADMVIEAV 384
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E + +K+++ +L++ P ILASNTST+D+N I T ++G HFFSPA+VM L
Sbjct: 385 FEEMGVKEKVLKELDRVMKPGAILASNTSTLDMNQIASFTKRPQDVIGTHFFSPANVMKL 444
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE+VR +T+ V+ ++ +GKKIKKT +V G C GF NRM Y++ A L+E G
Sbjct: 445 LEVVRGEKTAKDVLATVMALGKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLEEGATP 504
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
+D+A+ KFG MGPFR+ DL G + A + + P Y S ++ E R G+
Sbjct: 505 AQVDKAVEKFGFAMGPFRMGDLAGNDIGWAIRKRRYQEKPGMKY-SKTADLLCEMGRYGQ 563
Query: 415 TTRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
T G+Y Y +R A P V IEK R GV P+ ++S+++IVE + + +VNE
Sbjct: 564 KTGAGWYDYVPGKRDAIPSQVVVDMIEKHRKDIGVT--PR--RISDEEIVERLVYSLVNE 619
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
A + EGIA KA+D+D+ + G GFP +R
Sbjct: 620 AAHILEEGIASKASDIDMVYLTGYGFPLHR 649
>gi|89901163|ref|YP_523634.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
gi|89345900|gb|ABD70103.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Rhodoferax ferrireducens T118]
Length = 699
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 194/510 (38%), Positives = 291/510 (57%), Gaps = 19/510 (3%)
Query: 1 MMLTSKPVKGEEAHSL---GLVDAVVAPNQ-LVSTARQWALDILEHR-RPWVATLYKTDK 55
M+++ +PVK E L L + + N+ L A +A + E R P V L
Sbjct: 152 MIVSGEPVKSELLAMLPGQQLFNKMATSNESLAEEALLYARSVAETRPLPLVRNLPCK-- 209
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
P G+A F+FAR + N P+ C+DVV+A G+ E E F L+ +
Sbjct: 210 -HPQGDA--YFQFARNMVGGMSKNFPAPLKCVDVVQAATTKKFDDGMLFERESFINLMWT 266
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRR-VKKVAILGGGLMGSGIATALILSNYPVI 174
C++L HIF AQR SK+P V+ P+R + VAI+G G MG GI+ + + V
Sbjct: 267 PECRALRHIFMAQRAASKIPDVS--ADTPQRAINSVAIIGAGTMGGGISMNFLNAGIAVK 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ E+ ++ L+ GI +R N +++VKKGK+ Q+K+E+ +SLL+ L Y+ KD DMVIEA+
Sbjct: 325 ILEMKQEALDRGIATIRKNYEAQVKKGKLKQDKYEQRMSLLSTTLSYDDLKDADMVIEAV 384
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E + +K+ +F +L++ P ILASNTST+D+N I T +VG HFFSPA+VM L
Sbjct: 385 FEEIGVKEAVFKELDRVMKPGAILASNTSTLDVNKIASFTKRPQDVVGMHFFSPANVMKL 444
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++R +T+ V+ ++ + KKIKKT +V G C GF NRM Y + L++ G
Sbjct: 445 LEVIRGEKTAKDVLATVMALAKKIKKTAVVSGVCDGFIGNRMIEQYGRQGGFLLDEGCTP 504
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
+D+A+ KFG MGPFR+ DL G + A + P+ Y S ++ E R G+
Sbjct: 505 AQVDKAVEKFGFAMGPFRMGDLAGNDIGWAIRKRRYLEKPDMKY-SKTADLLCEKGRFGQ 563
Query: 415 TTRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
T G+Y Y +R A P+ EV K IE R+ G I P+ K+S+++IV+ + + +VNE
Sbjct: 564 KTGAGWYDYVAGKRDAIPNAEVVKMIEDHRAALG--ITPR--KISDEEIVQRLVYSLVNE 619
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
A + EGIA KA+D+D+ +MG GFP +R
Sbjct: 620 AAHILEEGIASKASDIDMVYLMGYGFPIWR 649
>gi|121604744|ref|YP_982073.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
gi|120593713|gb|ABM37152.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
Length = 699
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 176/439 (40%), Positives = 259/439 (58%), Gaps = 7/439 (1%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
F+FAR + A N P+ C+D VEA G++ E E F L+ + ++L HIF
Sbjct: 217 FQFARNMVKGMAKNFPAPLKCVDAVEAATKQKFDEGMRLEREFFTNLMFTPESRALRHIF 276
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
A+R SK+P + R + VA++G G MG GIA + + PV + E+ + LE
Sbjct: 277 MAERAASKIPDLP-ADTPKREINSVAVIGAGTMGGGIAMNFLNAGIPVKMLEMKPEALER 335
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
GI +R N +S+VKKGK+ Q+K+E+ + LL+ L Y KD D+VIEA+ E++ +KQ +F
Sbjct: 336 GIATIRKNYESQVKKGKLKQDKYEQRMGLLSTTLSYGDLKDADLVIEAVFEDMGVKQAVF 395
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
+L++ P ILASNTST+DLN I T + +VG HFFSPA++M LLE+VR +T
Sbjct: 396 RELDRVMKPGAILASNTSTLDLNQIASFTQRPEDVVGLHFFSPANIMKLLEVVRGEKTGK 455
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
V+ ++ I KKI+KT +V G C GF NRM Y + L++ G +D+AI KFG
Sbjct: 456 DVLATVMAIAKKIRKTAVVSGVCDGFIGNRMIEQYGRQGGFLLDEGCTPEQVDKAIEKFG 515
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-D 424
MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+Y Y
Sbjct: 516 FAMGPFRMGDLAGNDIGWAIRKRRYQEKPDMKY-SKTADLLCEKGRFGQKTGAGWYDYVA 574
Query: 425 ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
+R A P+ EV K IE+ R+ G I P+ K+S+++IV+ + + +VNE + EGIA
Sbjct: 575 GKRDAIPNQEVVKMIEEHRASLG--ITPR--KISDEEIVQRLVYSLVNEGAHILEEGIAS 630
Query: 485 KAADLDIASVMGMGFPPYR 503
KA+D+D+ +MG GFP YR
Sbjct: 631 KASDIDMVYLMGYGFPIYR 649
>gi|319762270|ref|YP_004126207.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
gi|330825800|ref|YP_004389103.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
gi|317116831|gb|ADU99319.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Alicycliphilus
denitrificans BC]
gi|329311172|gb|AEB85587.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
Length = 699
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 193/517 (37%), Positives = 292/517 (56%), Gaps = 24/517 (4%)
Query: 1 MMLTSKPVKGEEAHSL---GLVDAVVA-PNQLVSTARQWALDILEHRR-PWVATLYKTDK 55
M+++ +PVK E ++ L D + A P L A +A + E R P V L
Sbjct: 152 MIVSGEPVKSEFIGAVPGQKLFDRMAASPESLPEEALAFARSVAEARPLPLVRNLPCK-- 209
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
P G+A F+FAR + A N P C+D VEA GLQ E E F L+ +
Sbjct: 210 -HPEGDA--YFQFARNMVKGMAKNFPAPAKCVDAVEAATRRKFADGLQYERELFINLMWT 266
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++L H+FFA+R SK+P V R +KKV ++G G MG GI+ + + PV +
Sbjct: 267 PESRALRHLFFAERAASKIPDVPS-DTPKRDIKKVGVIGAGTMGGGISMNFLNAGIPVTI 325
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E+ ++ L+ GI +R N +++VKKGK+ ++K+++ ++LL+ L Y+ KD D++IEA+
Sbjct: 326 LEMKQEALDRGIATIRKNYEAQVKKGKLKEDKYQQRMALLSTTLSYDDLKDCDLIIEAVF 385
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +K+ +F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LL
Sbjct: 386 EELGVKEAVFRQLDQVAKPGAILASNTSTLDVDRIAAFTRRPQDVVGMHFFSPANVMKLL 445
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR T+ V+ ++ I KKI+KT +V G C GF NRM Y+Q A L++ G
Sbjct: 446 EVVRGKATAKDVLATVMAIAKKIRKTAVVSGVCDGFIGNRMIERYSQQAGFLLDEGCTPS 505
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+AI +FG MGPFR+ DL G + A + P+ Y S ++ E R G+
Sbjct: 506 QVDKAIERFGFAMGPFRMGDLAGNDIGWAIRKRRYVEKPDMKY-SKTADLLCEMGRFGQK 564
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T G+Y Y +R A P P V+K +E+ R G+A P+ K+S+++IV+ + + +VNE
Sbjct: 565 TGAGWYDYAPGKRDAIPSPMVEKMVEEHRKALGIA--PR--KISDEEIVQRLVYSLVNEG 620
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRG 511
++ EGIA KA D+D+ + G GFP IHRG
Sbjct: 621 AKILEEGIASKAGDIDMVYLTGYGFP-------IHRG 650
>gi|170733265|ref|YP_001765212.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia MC0-3]
gi|169816507|gb|ACA91090.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
cenocepacia MC0-3]
Length = 694
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 190/505 (37%), Positives = 277/505 (54%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ GL D + A L+ A +A + + P + E
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDEM-ADGDLLDAAVAFARKVGAQKGPHPRVRDRKIVHE--- 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +FAR AR APN P CID +EAGV++G G E E F L+ + ++
Sbjct: 208 NAAGFIQFARNSARAAAPNYPAPHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V D L R +++V ++G G MG GIA I + PV L E
Sbjct: 268 LRHAFFGERAASKIPDVPADTPL--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ LE G+ +R N ++VKKGK+TQEK + ++L+T L Y+ KD D+++EA+ E +
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQEKLDARLALITPTLSYDDLKDADLIVEAVFEELG 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRKLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +DR
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI KFG MGPFR++DL G + A + P+ Y S I + E R G+ T G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLQY-SKIADRLCEKGRFGQKTGAG 564
Query: 420 FYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y RKA P V + + GV + K+ + +IVE + F +VNE ++
Sbjct: 565 WYDYVPGDRKAKPSSLVDEMVVAYSKERGV----ERRKIGDDEIVERLVFALVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
E IA KA+D+D+ + G GFP +R
Sbjct: 621 EEKIASKASDIDMVYLTGYGFPLWR 645
>gi|170701227|ref|ZP_02892196.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
IOP40-10]
gi|170133856|gb|EDT02215.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
IOP40-10]
Length = 694
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 278/505 (55%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ + GL DA+ A L+ A +A + + P + E
Sbjct: 152 MIVSGAPVPSEQLANSGLFDAM-ADGDLLDAAVAFACKVGAQKGPHPRVRDRKIVHE--- 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +FAR AR APN P CID +EAGV++G G E E F L+ + ++
Sbjct: 208 NAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V D + R +++V ++G G MG GIA I + PV L E
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ LE G+ +R N ++VKKGK+TQ+K + ++L+T L Y+ KD D+++EA+ E +
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQQKLDARMALITPTLSYDDLKDADLIVEAVFEELG 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L+ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFGQLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +DR
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI KFG MGPFR++DL G + A + P+ Y S I + E R G+ T G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLQY-SKIADRLCELGRFGQKTGGG 564
Query: 420 FYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y RKA P V + + GV + K+ + +IVE + F +VNE ++
Sbjct: 565 WYDYVPGDRKAKPSALVDEMVVAYSKERGV----ERRKIGDDEIVERLVFALVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
E IA KA+D+D+ + G GFP +R
Sbjct: 621 EEKIASKASDIDMVYLTGYGFPLWR 645
>gi|206560342|ref|YP_002231106.1| putative fatty acid degradation protein [Burkholderia cenocepacia
J2315]
gi|198036383|emb|CAR52279.1| putative fatty acid degradation protein [Burkholderia cenocepacia
J2315]
Length = 700
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 190/505 (37%), Positives = 276/505 (54%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ GL D + A L+ A +A + + P D+
Sbjct: 158 MIVSGAPVPSEQLAKSGLFDEM-ADGDLLDAAVAFARKVGAQKGPHPRV---RDRKIVHD 213
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +FAR AR APN P CID +EAGV++G G E E F L+ + ++
Sbjct: 214 NAAGFIQFARNSARAAAPNYPAPHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 273
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V D L R +++V ++G G MG GIA I + PV L E
Sbjct: 274 LRHAFFGERAASKIPDVPADTPL--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 331
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ LE G+ +R N ++VKKGK+TQEK + ++L+T L Y+ KD D+++EA+ E +
Sbjct: 332 QDALERGLATIRKNYDAQVKKGKLTQEKLDARMALITPTLSYDDLKDADLIVEAVFEELG 391
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 392 VKEQVFKKLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 451
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +DR
Sbjct: 452 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 511
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI KFG MGPFR++DL G + A + P Y S I + E R G+ T G
Sbjct: 512 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPGLQY-SKIADRLCEQGRFGQKTGAG 570
Query: 420 FYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y RKA P V + + GV + K+ + +IVE + F +VNE ++
Sbjct: 571 WYDYVPGDRKAKPSSLVDEMVVAYSKERGV----ERRKIGDDEIVERLVFALVNEGAKIL 626
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
E IA KA+D+D+ + G GFP +R
Sbjct: 627 EEKIASKASDIDMVYLTGYGFPLWR 651
>gi|115351945|ref|YP_773784.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria AMMD]
gi|115281933|gb|ABI87450.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia ambifaria AMMD]
Length = 694
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 278/505 (55%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ + GL DA+ A L+ A +A + + P + E
Sbjct: 152 MIVSGAPVPSEQLANSGLFDAM-ADGDLLDAAVAFARKVGAQKGPHPRVRDRKIVHE--- 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +FAR AR APN P CID +EAGV++G G E E F L+ + ++
Sbjct: 208 NAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V D + R +++V ++G G MG GIA I + PV L E
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ LE G+ +R N ++VKKGK+TQ+K + ++L+T L Y+ KD D+++EA+ E +
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQQKLDARMALITPTLSYDDLKDADLIVEAVFEELG 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L+ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFGQLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +DR
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI KFG MGPFR++DL G + A + P+ Y S I + E R G+ T G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLQY-SKIADRLCELGRFGQKTGGG 564
Query: 420 FYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y RKA P V + + GV + K+ + +IVE + F +VNE ++
Sbjct: 565 WYDYVPGDRKAKPSALVDEMVVAYSKERGV----ERRKIGDDEIVERLVFALVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
E IA KA+D+D+ + G GFP +R
Sbjct: 621 EEKIASKASDIDMVYLTGYGFPLWR 645
>gi|421866883|ref|ZP_16298545.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
cenocepacia H111]
gi|444358524|ref|ZP_21159920.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia BC7]
gi|358073047|emb|CCE49423.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
cenocepacia H111]
gi|443603879|gb|ELT71857.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia BC7]
Length = 694
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 190/505 (37%), Positives = 276/505 (54%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ GL D + A L+ A +A + + P D+
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDEM-ADGDLLDAAVAFARKVGAQKGPHPRV---RDRKIVHD 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +FAR AR APN P CID +EAGV++G G E E F L+ + ++
Sbjct: 208 NAAGFIQFARNSARAAAPNYPAPHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V D L R +++V ++G G MG GIA I + PV L E
Sbjct: 268 LRHAFFGERAASKIPDVPADTPL--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ LE G+ +R N ++VKKGK+TQEK + ++L+T L Y+ KD D+++EA+ E +
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQEKLDARMALITPTLSYDDLKDADLIVEAVFEELG 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFKKLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +DR
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI KFG MGPFR++DL G + A + P Y S I + E R G+ T G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPGLQY-SKIADRLCEQGRFGQKTGAG 564
Query: 420 FYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y RKA P V + + GV + K+ + +IVE + F +VNE ++
Sbjct: 565 WYDYVPGDRKAKPSSLVDEMVVAYSKERGV----ERRKIGDDEIVERLVFALVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
E IA KA+D+D+ + G GFP +R
Sbjct: 621 EEKIASKASDIDMVYLTGYGFPLWR 645
>gi|241763901|ref|ZP_04761944.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
2AN]
gi|241366796|gb|EER61228.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
2AN]
Length = 699
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 179/449 (39%), Positives = 263/449 (58%), Gaps = 11/449 (2%)
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P G+A F+FAR + + N P C+D VEA GL E E F L+ +
Sbjct: 210 HPQGDA--YFQFARNMVKGMSKNFPAPAKCVDAVEAATKKKFADGLLFERELFINLMWTP 267
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRR-VKKVAILGGGLMGSGIATALILSNYPVIL 175
+SL H+F A+R SK+P V P+R +K VA++G G MG GIA + + PV +
Sbjct: 268 ESRSLRHLFLAERAASKIPDVP--ADTPKRDIKAVAVIGAGTMGGGIAMNFLNAGIPVKM 325
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E+ ++ L+ GI ++ N +++VKKGK+ Q+K+E+ ++LL+ LDY KD D+VIEA+
Sbjct: 326 LEMKQEALDRGIATIKKNYEAQVKKGKLKQDKYEQRMALLSTTLDYADLKDADLVIEAVF 385
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +K+ +F L+ P ILASNTST+D+N I T +VG HFFSPA+VM LL
Sbjct: 386 EELGVKEAVFKQLDAVMKPGAILASNTSTLDVNKIAHFTQRPQDVVGLHFFSPANVMKLL 445
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR + T+ V+ ++ + KKI+KT +V G C GF NRM Y + L++ G
Sbjct: 446 EVVRGDATAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYGRQGGFLLDEGCTPE 505
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+A+ KFGM MGPFR+ DL G + A + P+ Y S ++ E R G+
Sbjct: 506 QVDKAMEKFGMAMGPFRMGDLAGNDIGWAIRKRRYTEKPDMKY-SKTADLLCEKGRFGQK 564
Query: 416 TRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T G+Y Y +R A P+ EV K IE R+ G I P+ K+S+++IV+ + F +VNEA
Sbjct: 565 TGAGWYDYVPGKRDAIPNAEVVKMIEDHRASLG--ITPR--KISDEEIVQRLVFSLVNEA 620
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA KA+D+D+ + G GFP YR
Sbjct: 621 AHILEEGIANKASDIDVVYIFGYGFPVYR 649
>gi|420247746|ref|ZP_14751139.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
gi|398070461|gb|EJL61761.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
Length = 694
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 178/440 (40%), Positives = 255/440 (57%), Gaps = 9/440 (2%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
+FAR A N P CID VEAGV+ G G++ E E F L+++ K+L H F
Sbjct: 213 IQFARNSVAAIAKNFPAPHKCIDAVEAGVLEGFEQGMKVERECFLALVQTPESKALRHAF 272
Query: 126 FAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLE 184
F +R SK+P V +D + R +KKVA++G G MG GIA I + PV++ E + L+
Sbjct: 273 FGERAASKIPDVPSDTPV--RDIKKVAVIGAGTMGGGIAMNFINAGLPVMMLETKQDALD 330
Query: 185 AGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQI 244
GI +R N ++ VKKGK+T E E+ ++ +T L Y+ KD D++IEA+ E + +K+Q+
Sbjct: 331 RGIATIRKNYEATVKKGKLTMEALEQRMASITPTLSYDDLKDADLIIEAVFEELGVKEQV 390
Query: 245 FADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTS 304
F L++ P ILASNTST+DLN I T +VG HFFSPA+VM LLE+VR T+
Sbjct: 391 FKRLDEVAKPGAILASNTSTLDLNKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKDTA 450
Query: 305 PQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKF 364
V+ ++ + KKIKKT +V G C GF NRM Y + A ++E G +D+AI KF
Sbjct: 451 KDVLATVMKVAKKIKKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDKAIEKF 510
Query: 365 GMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYD 424
G MGPFR++DL G + A + + P+ Y S I + E R G+ T G+Y Y
Sbjct: 511 GFAMGPFRMSDLAGNDIGWAIRKRRYQEHPDMHY-SKIADRLCETGRFGQKTGGGWYDYK 569
Query: 425 E-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIA 483
R A P ++ + I GV + KLS+ +IVE + F +VNE ++ EGIA
Sbjct: 570 AGDRNAYPSKQIDEMIVGYSKEVGV----ERRKLSDDEIVERLVFALVNEGAKILEEGIA 625
Query: 484 VKAADLDIASVMGMGFPPYR 503
KA+D+D+ + G GFP +R
Sbjct: 626 SKASDIDMVYLTGYGFPLWR 645
>gi|390571716|ref|ZP_10251953.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
gi|389936330|gb|EIM98221.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
Length = 694
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 192/505 (38%), Positives = 281/505 (55%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ + DA++ L+ A +A + P + KIE
Sbjct: 152 MIVSGTPVMSEKLAGTPIFDALI-EGDLMEGALAFARKVGAQSGPH--PKIRDRKIEHPN 208
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A I +FAR A N P CID VEAGV+ G G++ E E F L+++ K+
Sbjct: 209 AAGFI-QFARNSVAAIAKNFPAPHKCIDAVEAGVLKGFEQGMKVERECFLALVQTPESKA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V +D + R +KKVA++G G MG GIA I + PV++ E
Sbjct: 268 LRHAFFGERAASKIPDVPSDTPV--RDIKKVAVIGAGTMGGGIAMNFINAGLPVMMLETK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L+ GI +R N ++ VKKGK+T E E+ ++ +T L Y+ KD D++IEA+ E +
Sbjct: 326 QDALDRGIATIRKNYEATVKKGKLTMEALEQRMASITPTLSYDDLKDADLIIEAVFEELG 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L++ P ILASNTST+DLN I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFKRLDEVAKPGAILASNTSTLDLNKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
T+ V+ ++ + KKIKKT +V G C GF NRM Y + A ++E G +D+
Sbjct: 446 GKDTAKDVLATVMKVAKKIKKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDK 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI KFG MGPFR++DL G + A + + P+ Y S + + E R G+ T G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEHPDMHY-SKVADRLCETGRFGQKTGGG 564
Query: 420 FYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y R A P ++ + I GV + KLS+ +IVE + F +VNE ++
Sbjct: 565 WYDYKAGDRNAYPSKQIDEMIVAYSKELGV----ERRKLSDDEIVERLVFALVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP +R
Sbjct: 621 EEGIASKASDIDMVYLTGYGFPLWR 645
>gi|124266965|ref|YP_001020969.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Methylibium petroleiphilum PM1]
gi|124259740|gb|ABM94734.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Methylibium petroleiphilum PM1]
Length = 700
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 256/442 (57%), Gaps = 13/442 (2%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
F+FAR A AP P CID+V A V GL+ E F L+ + ++L H+F
Sbjct: 215 FQFARNTATAMAPQFPAPRKCIDMVAASVALPFDEGLRLEWSTFTALMLTPESRALRHVF 274
Query: 126 FAQRGTSK---VPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKF 182
A+R K VP T + R VK++A++G G MG GIA + + PV++ E ++
Sbjct: 275 MAERAAGKIADVPADTPV----RSVKRLAVIGAGTMGGGIAMNFLNAGLPVVMLETKQEA 330
Query: 183 LEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQ 242
L+ G+ +R N +++VKKGK+T E+ E+ + LL+ LDY D DMVIEA+ E++ +K+
Sbjct: 331 LDRGVATIRRNYEAQVKKGKLTAERAEQRLGLLSTTLDYADLADADMVIEAVFEDLGVKE 390
Query: 243 QIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQ 302
Q+F L++ P ILASNTST+DLN I T ++G HFFSPA+VM LLE+VR Q
Sbjct: 391 QVFRRLDEVMKPGAILASNTSTLDLNRIAAFTRRPQDVIGTHFFSPANVMKLLEVVRGEQ 450
Query: 303 TSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAIT 362
T V+ ++ +GKKI+KT +V G C GF NRM Y + AFLLV+ G+ +D+AI
Sbjct: 451 TGKDVLATVMQLGKKIRKTCVVSGVCDGFIGNRMVEQYLRQAFLLVDEGSTPQQVDKAIE 510
Query: 363 KFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYL 422
+FG MGPFR++DL G + A + P Y S ++ E R G+ T G+Y
Sbjct: 511 RFGFAMGPFRMSDLAGNDIGWAIRKRRYAERPHMQY-SKTPDLLCETGRFGQKTGAGWYD 569
Query: 423 YDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEG 481
Y +R A P P V + IE R G I P+ K+ + +IVE + + +VNE + EG
Sbjct: 570 YQAGKRDAIPSPVVLELIEGHRRTLG--ITPR--KIGDDEIVERLVYALVNEGAHLLEEG 625
Query: 482 IAVKAADLDIASVMGMGFPPYR 503
IA KA D+D+ + G GFP +R
Sbjct: 626 IAAKAGDIDMVYLTGYGFPLHR 647
>gi|388568321|ref|ZP_10154741.1| 3-hydroxyacyl-CoA dehydrogenase [Hydrogenophaga sp. PBC]
gi|388264521|gb|EIK90091.1| 3-hydroxyacyl-CoA dehydrogenase [Hydrogenophaga sp. PBC]
Length = 704
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/439 (39%), Positives = 259/439 (58%), Gaps = 7/439 (1%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
F+FAR + A N P C+D VEA G+ E E F L+ + C++L H+F
Sbjct: 221 FQFARNMVKGMAKNFPAPAKCVDAVEAATKQKFDQGMLTEREMFINLMWTPECRALRHLF 280
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
A+R SK+P V + R+++KVA++G G MG GI+ + + PV + E+ ++ L+
Sbjct: 281 MAERAASKIPDVPE-DTPQRKIEKVAVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDR 339
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
G+G +R N +++VKKGK+ Q+K + + LL ++YE KD D+VIEA+ E + +K+ +F
Sbjct: 340 GVGVMRGNYEAQVKKGKLKQDKLDARMGLLKTTVNYEDIKDADLVIEAVFEEIGVKEAVF 399
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+VR +T+
Sbjct: 400 KKLDEVMKPGAILASNTSTLDVNKIASFTKRPQDVVGLHFFSPANVMKLLEVVRGEKTAK 459
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
V+ ++ + KKIKKT +V G C GF NRM Y + L++ G +DRAI KFG
Sbjct: 460 DVMATVMAVAKKIKKTAVVSGVCDGFIGNRMIEQYGRQGGFLLDEGCTPAQVDRAIEKFG 519
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-D 424
MGPFR+ DL G + A + P+ Y S ++ E R G+ KG+Y Y
Sbjct: 520 FAMGPFRMGDLAGNDIGWAIRKRRYTEKPDMKY-SKTADLLCEKGRFGQKVGKGWYDYVP 578
Query: 425 ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
+R A P+ EV++ I + R G I P+ K+S+++IV+ + F +VNEA + EGIA
Sbjct: 579 GKRDAIPNAEVEQMIVEHRKALG--ITPR--KISDEEIVQRLVFSLVNEAAHILEEGIAN 634
Query: 485 KAADLDIASVMGMGFPPYR 503
KA+D+D+ + G GFP +R
Sbjct: 635 KASDIDVVYIFGYGFPVHR 653
>gi|416997008|ref|ZP_11939200.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Burkholderia sp.
TJI49]
gi|325518003|gb|EGC97818.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Burkholderia sp.
TJI49]
Length = 694
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 282/505 (55%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ GL D +V +L+ A +A + +P + + KI
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDEMV-DGELLDAAVAFARKV--GAQPGLHPRVRDRKIVHEN 208
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A I +FAR A+ APN P CID +EAGV++G G E E F L+ + ++
Sbjct: 209 AAGFI-QFARNSAKAAAPNFPAPHKCIDAIEAGVLNGFDKGSIAEREGFVALMMTPESRA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V D L R +++VA++G G MG GIA + + PV L E
Sbjct: 268 LRHAFFGERAASKIPDVPADTPL--REIRRVAVIGAGTMGGGIAMNFVNAGLPVTLLETK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L+ G+ +R N ++VKKGK+TQEK + ++L+ L Y+ KD D++IEA+ E +
Sbjct: 326 QDALDRGLATIRKNYDAQVKKGKLTQEKLDARMALIAPTLSYDDLKDADLIIEAVFEELG 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRKLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +DR
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI KFG MGPFR++DL G + A + P+ Y S I + E R G+ T G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLHY-SKIADRLCEQGRFGQKTGAG 564
Query: 420 FYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y RKA P V + + G+ + ++ + +IVE + F +VNE ++
Sbjct: 565 WYDYVPGDRKARPSALVDEMVVAYSQERGI----ERRRIGDDEIVERLVFALVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
AE IA KA+D+D+ + G GFP +R
Sbjct: 621 AEKIASKASDIDMVYLTGYGFPLWR 645
>gi|167586951|ref|ZP_02379339.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Burkholderia
ubonensis Bu]
Length = 694
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 190/508 (37%), Positives = 276/508 (54%), Gaps = 19/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL DA+ + L V+ AR+ H R + +
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAMAEGDLLDAAVAFARKVGAQAGPHPRVRDRKIVHEN--- 208
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR A+ APN P CID +EAGV+ G G+ E + F L+ +
Sbjct: 209 ----AAGFIQFARNSAKAAAPNFPAPHKCIDAIEAGVLHGFDHGVIAERDGFVALMMTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H FF +R SK+P V D + R V++VA++G G MG GIA + + PV L
Sbjct: 265 SRALRHAFFGERAASKIPDVPADTPV--REVRQVAVIGAGTMGGGIAMNFVNAGLPVTLL 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E + LE G+ +R N ++VKKGK+TQEK + ++L+T L Y KD D++IEA+ E
Sbjct: 323 ETKQDALERGLATIRKNYDAQVKKGKLTQEKLDARMALITPTLSYADLKDADLIIEAVFE 382
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE
Sbjct: 383 ELGVKEQVFRQLDEAAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLE 442
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G
Sbjct: 443 VVRGEATAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQ 502
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+DRAI KFG MGPFR++DL G + A + P+ Y I + E R G+ T
Sbjct: 503 VDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLHYPK-IADRLCEQGRFGQKT 561
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y RKA P V + I GV + K+ + +IVE + F +VNE
Sbjct: 562 GAGWYDYAPGERKAKPSALVDEMIVAYSQERGV----ERRKMGDDEIVERLVFALVNEGA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ E IA KA+D+D+ + G GFP +R
Sbjct: 618 KILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|78066676|ref|YP_369445.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. 383]
gi|77967421|gb|ABB08801.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia sp. 383]
Length = 694
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/506 (37%), Positives = 277/506 (54%), Gaps = 15/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ GL D + A L+ A +A + + P D+
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDEM-ADGDLLDAAVAFARKVGAQKGPHPRV---RDRKIVHA 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +FAR AR APN P CID +EAGV+ G G E E F L+ + ++
Sbjct: 208 NAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLHGFDKGSVAEREGFVALMMTPESRA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V D L R +++V ++G G MG GIA + + PV L E
Sbjct: 268 LRHAFFGERAASKIPDVPADTPL--REIRRVGVIGAGTMGGGIAMNFVNAGLPVTLLETK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ LE G+ +R N ++VKKGK+TQEK + ++L+T L Y+ KD D+++EA+ E +
Sbjct: 326 QDALERGVATIRKNYDAQVKKGKLTQEKLDARMALITPTLSYDDLKDADLIVEAVFEELG 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L++ ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFKKLDEVAKAGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +DR
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
AI KFG MGPFR++DL G + A ++IE P+ Y S I + E R G+ T
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYIEQ-PDLQY-SKIADHLCEQGRFGQKTGA 563
Query: 419 GFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y RKA P V + + GV + K+ + +IVE + F + NE ++
Sbjct: 564 GWYDYVPGDRKAKPSSLVDEMVVAYSKERGV----ERRKIGDDEIVERLVFALANEGAKI 619
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
E IA KA+D+D+ + G GFP +R
Sbjct: 620 LEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|172060871|ref|YP_001808523.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria MC40-6]
gi|171993388|gb|ACB64307.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
MC40-6]
Length = 694
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 277/505 (54%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ + GL DA+ A L+ A +A + + P + E
Sbjct: 152 MIVSGAPVPSEQLANSGLFDAM-ADGDLLDAAVAFARKVGAQKGPHPRVRDRKIVHE--- 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +FAR AR APN P CID +EAGV++G G E E F L+ + ++
Sbjct: 208 NAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLNGFDKGSIAEREGFVALMMTPESRA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V D + R +++V ++G G MG GIA I + PV L E
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L+ G+ +R N ++VKKGK+TQ+K + ++L+T L Y+ KD D+++EA+ E +
Sbjct: 326 QDALDRGLATIRKNYDAQVKKGKLTQQKLDARMALITPTLSYDDLKDADLIVEAVFEELG 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L+ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFGQLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +DR
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI KFG MGPFR++DL G + A + P+ Y M + E R G+ T G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLHYSKMADRLC-ELGRFGQKTGGG 564
Query: 420 FYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y RKA P V + + G+ + K+ + +IVE + F +VNE ++
Sbjct: 565 WYDYVPGDRKAKPSALVDEMVVAYSKECGI----ERRKIGDDEIVERLVFALVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
E IA KA+D+D+ + G GFP +R
Sbjct: 621 EEKIASKASDIDMVYLTGYGFPLWR 645
>gi|444371965|ref|ZP_21171470.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia K56-2Valvano]
gi|443594373|gb|ELT63030.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia K56-2Valvano]
Length = 694
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 275/505 (54%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ GL D + A L+ A +A + + P D+
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDEM-ADGDLLDAAVAFARKVGAQKGPHPRV---RDRKIVHD 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +FAR AR APN P CID +EAGV++G G E E F L+ + ++
Sbjct: 208 NAAGFIQFARNSARAAAPNYPAPHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V D L R +++V ++G G MG GIA I + PV L E
Sbjct: 268 LRHAFFGERAASKIPDVPADTPL--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ LE G+ +R N ++VKKGK+TQEK + ++L+T L + KD D+++EA+ E +
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQEKLDARMALITPTLSCDDLKDADLIVEAVFEELG 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFKKLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +DR
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI KFG MGPFR++DL G + A + P Y S I + E R G+ T G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPGLQY-SKIADRLCEQGRFGQKTGAG 564
Query: 420 FYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y RKA P V + + GV + K+ + +IVE + F +VNE ++
Sbjct: 565 WYDYVPGDRKAKPSSLVDEMVVAYSKERGV----ERRKIGDDEIVERLVFALVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
E IA KA+D+D+ + G GFP +R
Sbjct: 621 EEKIASKASDIDMVYLTGYGFPLWR 645
>gi|161524541|ref|YP_001579553.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia multivorans ATCC
17616]
gi|189350703|ref|YP_001946331.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
17616]
gi|160341970|gb|ABX15056.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
multivorans ATCC 17616]
gi|189334725|dbj|BAG43795.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
17616]
Length = 694
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 188/508 (37%), Positives = 279/508 (54%), Gaps = 19/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL D + + L V+ AR+ H R + KI+
Sbjct: 152 MIVSGAPVPSEQLAESGLFDQLADGDLLDAAVAFARKAGAQPGPHPR------VRDRKID 205
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + APN P CID +EAGV+ G G E E F L+ +
Sbjct: 206 H-DNAAGFIQFARNSVKAAAPNFPAPRKCIDAIEAGVLHGFDKGSIAEREGFVALMMTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H FF +R SK+P V D + R +++VA++G G MG GIA + + PV L
Sbjct: 265 SRALRHAFFGERAASKIPDVPADTPV--RDIRRVAVIGAGTMGGGIAMNFVNAGLPVTLL 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E ++ LE G+ +R N ++VKKGK+TQEK E ++L+ L Y+ KD D+++EA+ E
Sbjct: 323 ETKQEALERGLATIRKNYDAQVKKGKLTQEKLEARMALIAPTLSYDDLKDADLIVEAVFE 382
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE
Sbjct: 383 ELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLE 442
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G
Sbjct: 443 VVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQ 502
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
IDRAI +FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 503 IDRAIEQFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKT 561
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y R+A P V + + G+ + K+++ +IVE + F +VNE
Sbjct: 562 GAGWYDYAPGDRRARPSALVDEMVVAYSKERGI----ERRKIADDEIVERLVFALVNEGA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ E IA KA+D+D+ + G GFP +R
Sbjct: 618 KILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|126665779|ref|ZP_01736760.1| fatty oxidation complex, alpha subunit [Marinobacter sp. ELB17]
gi|126629713|gb|EBA00330.1| fatty oxidation complex, alpha subunit [Marinobacter sp. ELB17]
Length = 697
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 181/497 (36%), Positives = 282/497 (56%), Gaps = 9/497 (1%)
Query: 8 VKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFK 67
V ++A +LG++D V + + +A I + +P DKI + ++F
Sbjct: 159 VGAKDALALGILDVVDDGKDVKAAGLAYAQQIADEGKPVRRVRDLKDKI-AADKGSDVFD 217
Query: 68 FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFA 127
RA +K+A P C+D +EA G+++E E F + + S +H FFA
Sbjct: 218 QFRAVLQKKARGQFSPFKCVDAIEAAFDLPFAEGMKRERELFTECMDSPQRAGQIHSFFA 277
Query: 128 QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGI 187
+R SKV G++ R V V I+G G MG GIA PVI+ E+ ++ L+ G+
Sbjct: 278 EREVSKVKGLSK-DTPVRDVNSVGIIGAGTMGGGIAMNFANVGIPVIIVEMKQEALDKGL 336
Query: 188 GRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFAD 247
G +R N ++ KKG++TQ++ E +L+TG L Y+ FK VD+VIEA+ EN+++K++IFA
Sbjct: 337 GIIRKNYENSAKKGRLTQQQVEDRTALITGSLSYDDFKSVDLVIEAVFENMAVKKEIFAK 396
Query: 248 LEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQV 307
L+ C P ILASNTST+D++ I T + +VG HFFSPA+VM LLE VR ++TS +V
Sbjct: 397 LDGICKPGTILASNTSTLDIDEIASATRRPEDVVGMHFFSPANVMKLLENVRGSKTSDEV 456
Query: 308 IVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMP 367
++ + KKIKK ++VGNC GF NRM A LV G +D+ +T G P
Sbjct: 457 KATVMAVAKKIKKVGVLVGNCHGFVGNRMLHRRGAEAMTLVNEGATPQQVDKVLTDLGYP 516
Query: 368 MGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-R 426
MG F ++DL G V + + N E+ S + + +++ R G+ T KG Y Y+E
Sbjct: 517 MGQFAMSDLAGIDVGYRI-REELRNAGEQVAPSWMDKLAEQN-RLGQKTMKGVYAYEEGS 574
Query: 427 RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKA 486
R PDPEV++ IE R+ G++ ++++++I+E + +VNEA ++ EG+A +A
Sbjct: 575 RTPVPDPEVERVIEDFRNEQGIS----SREITDQEILERCMYVMVNEAAKILEEGVADRA 630
Query: 487 ADLDIASVMGMGFPPYR 503
D+D+ + G GFP YR
Sbjct: 631 LDIDVVWIYGYGFPAYR 647
>gi|402566295|ref|YP_006615640.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
gi|402247492|gb|AFQ47946.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
Length = 694
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 185/505 (36%), Positives = 277/505 (54%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ S GL D + A L+ A +A + + P + E
Sbjct: 152 MIVSGAPVPSEQLASSGLFDEM-ADGDLLDAAVAFARKVGTQKGPHPRVRDRKIVHE--- 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +FAR A+ APN P CID +EAGV++G G E + F L+ + ++
Sbjct: 208 NAAGFIQFARNSAQAAAPNFPAPHKCIDAIEAGVLNGFDKGSVAERDGFVALMMTPESRA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V D + R +++V ++G G MG GIA + + PV L E
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REIRRVGVIGAGTMGGGIAMNFVNAGLPVTLLETK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L+ G+ +R N ++VKKGK+TQ+K + ++L+T L Y+ KD D+++EA+ E +
Sbjct: 326 QDALDRGLATIRKNYDAQVKKGKLTQQKLDARMALITPTLSYDDLKDADLIVEAVFEELG 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L+ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFGRLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +DR
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI KFG MGPFR++DL G + A + P+ Y S I + E R G+ T G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLQY-SKIADRLCEQGRFGQKTGGG 564
Query: 420 FYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y RKA P V + + GV + K+ + +IVE + F +VNE ++
Sbjct: 565 WYDYVPGERKAKPSALVDEMVVAYSKERGV----ERRKIGDDEIVERLVFALVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
E IA KA+D+D+ + G GFP +R
Sbjct: 621 EEKIASKASDIDMVYLTGYGFPLWR 645
>gi|301631451|ref|XP_002944811.1| PREDICTED: peroxisomal bifunctional enzyme-like [Xenopus (Silurana)
tropicalis]
Length = 735
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/449 (39%), Positives = 263/449 (58%), Gaps = 11/449 (2%)
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P G+A F+FAR + A N+ P C+D VEA GL E E F L+ +
Sbjct: 210 HPEGDA--YFQFARNMVKGMAKNVPAPAKCVDAVEAATRRKFTDGLAYERELFIHLMWTP 267
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRR-VKKVAILGGGLMGSGIATALILSNYPVIL 175
++L H+F A+R SK+ V PRR VKKV ++G G MG GI+ + + PV +
Sbjct: 268 ESRALRHLFLAERAASKISDVP--ADTPRRDVKKVGVIGAGTMGGGISMNFLNAGIPVTI 325
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E+ ++ LE GI +R N +++VKKGK+ ++K+++ ++LL+ L Y+ KD D++IEA+
Sbjct: 326 LEMQQEALERGIATIRKNYEAQVKKGKLKEDKYQQRMALLSSTLSYDDLKDCDLIIEAVF 385
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN+S+K+Q+F L+ P ILASNTST+D++ I T +VG HFFSPA+VM LL
Sbjct: 386 ENLSVKEQVFKQLDAVMKPGAILASNTSTLDVDKIAAFTQRPQDVVGLHFFSPANVMKLL 445
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR +T V+ ++ + KKI+K +V G C GF NRM Y + L++ G
Sbjct: 446 EVVRGARTGKDVMATVMAMAKKIRKVAVVSGVCDGFIGNRMIEQYGRQGGFLLDEGCTPA 505
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+AI KFG MGPFR+ DL G + A + + P+ Y S ++ E R G+
Sbjct: 506 QVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRYQEKPDMKY-SKTADLLCEKGRFGQK 564
Query: 416 TRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T G+Y Y RR A P EV + IE+ R G I P+ K+S+++IV+ + F +VNEA
Sbjct: 565 TGAGWYDYAAARRDAIPSAEVVQMIEEHRKALG--ITPR--KISDEEIVQRLVFALVNEA 620
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA KA+D+D+ + G GFP +R
Sbjct: 621 AHILEEGIANKASDIDVVYIFGYGFPVHR 649
>gi|410619733|ref|ZP_11330627.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola polaris LMG 21857]
gi|410160865|dbj|GAC34765.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola polaris LMG 21857]
Length = 702
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 190/511 (37%), Positives = 291/511 (56%), Gaps = 23/511 (4%)
Query: 1 MMLTSKPVKGEEAHSL-GLVDAVVA-PNQLVSTARQWALDILEHRRPWVATLYKTDK--I 56
M+++ +P E+A L G+ D +V P+ L+S A + ++ A + KT I
Sbjct: 152 MIVSGRP---EKASKLSGVFDLIVEDPSNLLSEAMAFVQKVIADG----AKIRKTADVAI 204
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
+ E+F R +KQA P CI VEA V GL +E E F + + S+
Sbjct: 205 DKASAPDELFAQYRQGLKKQARGFFAPERCIQAVEASVSLPFEQGLVREGELFMECMGSK 264
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++ H FFA+R S V D R +K+V I+G G MG GIA + PVI+
Sbjct: 265 EARAQQHFFFAERAASHVSDY-DKSTPVRDIKQVGIIGAGTMGGGIAMNFANAGIPVIML 323
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E+ ++ L+ G+ +R N ++ KKGK+TQ+ E+ ++LLTG +Y + DVD+VIEA+ E
Sbjct: 324 ELKQEALDKGLALIRKNYENSAKKGKLTQQAVEERMALLTGSTEYAALSDVDLVIEAVFE 383
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+S+K+++FA L+K C P ILASNTST+D+N I E T + ++G HFFSPA+VM LLE
Sbjct: 384 KMSVKKEVFAALDKVCKPGAILASNTSTLDVNEIAESTSRPEDVIGLHFFSPANVMKLLE 443
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+V+ ++TS +VI + + KKI K ++VG C GF NRM PY + A L+ G
Sbjct: 444 VVKADKTSAEVIKTSMQMAKKINKVAVLVGVCFGFVGNRMIEPYGREAARLMLEGATPQQ 503
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAI---ATGMQFIENFPERTYKSMIIPIMQEDKRAG 413
+D+ I FG+PMGPF + D+ G + + +FIE+ P +Y ++ + + R G
Sbjct: 504 VDKIIYDFGLPMGPFTMGDMAGLDIGFYVRESRREFIEHDP--SY-CVVSDRLVKQGRVG 560
Query: 414 ETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
+ +G Y+Y+ R PDPEV + ++ + GVA +SE++I+E I FP++N
Sbjct: 561 LKSGRGAYMYEPGNRTPIPDPEVVEMAKEEAARLGVAQR----DISEQEILERIIFPLIN 616
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E + EGIA K++D+D+ V G GFP YR
Sbjct: 617 EGALILEEGIAAKSSDIDVIYVYGYGFPVYR 647
>gi|149378483|ref|ZP_01896167.1| fatty oxidation complex, alpha subunit [Marinobacter algicola
DG893]
gi|149357234|gb|EDM45772.1| fatty oxidation complex, alpha subunit [Marinobacter algicola
DG893]
Length = 697
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 182/509 (35%), Positives = 280/509 (55%), Gaps = 19/509 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ T + V ++A +L +VDAV + + + +A + + +P TDK++
Sbjct: 152 MITTGEFVGAKDALALSIVDAVEDGSDIKAAGLAYAQKVADEGKPVRRVRDLTDKLQA-D 210
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ ++F+ RA +K+A L P C+D VEA G+++E E F + + S
Sbjct: 211 KGSDVFEQFRAGLQKKARGLFSPFKCVDAVEAAFSLPFEDGVKRERELFMECMESPQRAG 270
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R SKV G++ R ++ V ++G G MG GIA + PV + EV +
Sbjct: 271 LVHSFFAEREVSKVKGLSK-DTPVRDIRTVGVIGAGTMGGGIAMNFANAGIPVTIAEVKQ 329
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+ +R N ++ KKG++TQ + E+ +SL++G L Y+ F DVD+VIEA+ E+ L
Sbjct: 330 EALDKGLAVIRRNYENTAKKGRITQAQVEERMSLISGTLTYDDFSDVDLVIEAVFESRDL 389
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K++IF L+ C P ILASNTST+ ++ I T ++G HFFSPA+VM LLEIVR
Sbjct: 390 KRKIFGQLDDACKPGAILASNTSTLSIDDIAAATKRPQDVIGLHFFSPANVMKLLEIVRG 449
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS +V + + KKI+K ++VGNC GF NRM A LV G +D+
Sbjct: 450 EKTSDEVKATAMALAKKIRKVGVMVGNCYGFVGNRMLHKRGAEAMALVNEGASPQQVDKV 509
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDK-----RAGET 415
+T G PMG F ++DL G + + ER +P DK R G+
Sbjct: 510 LTDLGFPMGQFAMSDLAGIDIGYSIRQ-------ERRKAGEDVPASWMDKLAEQGRLGQK 562
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T+ G Y Y+E RK PDPEV + I + R G+ K +++++I+E + +VNE
Sbjct: 563 TQAGVYKYEEGNRKPIPDPEVDRVIAEFREEQGI----KSRDITDQEILERCMYVMVNEG 618
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ EGIA ++ D+DI + G GFP YR
Sbjct: 619 AKILEEGIADRSLDIDITWIYGYGFPAYR 647
>gi|330817251|ref|YP_004360956.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
gi|327369644|gb|AEA61000.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Burkholderia
gladioli BSR3]
Length = 694
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 188/508 (37%), Positives = 280/508 (55%), Gaps = 19/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ V E+ GL D + + L V+ AR+ H R + KIE
Sbjct: 152 MIVSGAAVPSEQLAKSGLFDEMAEGDLLEAAVALARRVGAKPGPHPR------VRDRKIE 205
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR AR AP P CID +EAGV+ G GL E E F L+++
Sbjct: 206 HP-NAAGFIQFARNSARAAAPQYPAPHKCIDAIEAGVLKGFDQGLIDEREGFVALVQTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H FF +R SK+P V D + R ++K+ ++G G MG GI + + PV L
Sbjct: 265 SRALRHAFFGERAASKIPDVPADTPV--REIRKLGVIGAGTMGGGITINFLNAGLPVTLL 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E ++ LE G+ +R N + +VKKGK+++EK E ++L++ L YE KD D++IEA+ E
Sbjct: 323 ETKQEALERGLATIRKNYEVQVKKGKLSEEKLEARMALISPTLSYEDLKDADLIIEAVFE 382
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE
Sbjct: 383 ELGVKEQVFRKLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGMHFFSPANVMKLLE 442
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G
Sbjct: 443 VVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQ 502
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+DRAI FG MGPFR++DL G + A + PE Y S I + E R G+ T
Sbjct: 503 VDRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYLEQPELHY-SKIADRLCELGRFGQKT 561
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y R+A P V + + +GV + K+++++IVE + + +VNE
Sbjct: 562 GGGWYDYQAGERRAKPSKLVDEMVLAYSKEAGV----ERRKIADEEIVERLVYALVNEGA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ EGIA KA+D+D+ + G GFP +R
Sbjct: 618 KILEEGIASKASDIDMVYLTGYGFPLWR 645
>gi|171322824|ref|ZP_02911545.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
MEX-5]
gi|171091819|gb|EDT37322.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
MEX-5]
Length = 615
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 276/507 (54%), Gaps = 17/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ + GL DA+ A L+ A +A + + P + E
Sbjct: 73 MIVSGAPVPSEQLANSGLFDAM-ADGDLLDAAVAFARKVGAQKGPHPRVRDRKIVHE--- 128
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +FAR AR APN P CID +EAGV++G G E E F L+ + ++
Sbjct: 129 NAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 188
Query: 121 LVHIFFAQRGTSK---VPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L H FF +R SK VP T + R +++V ++G G MG GIA + + PV L E
Sbjct: 189 LRHAFFGERAASKIADVPADTPV----REIRRVGVIGAGTMGGGIAMNFVNAGLPVTLLE 244
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ LE G+ +R N ++VKKGK+TQ+K + ++L+T L Y+ KD D+++EA+ E
Sbjct: 245 TKQDALERGLATIRKNYDAQVKKGKLTQQKLDARMALITPTLSYDDLKDADLIVEAVFEE 304
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F L+ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+
Sbjct: 305 LGVKEQVFGRLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEV 364
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +
Sbjct: 365 VRGAHTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQV 424
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI KFG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 425 DRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLQY-SKIADRLCEQGRFGQKTG 483
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y RKA P V + + G+ + K+ + +IVE + F +VNE +
Sbjct: 484 GGWYDYVPGDRKAKPSALVDEMVVAYSKERGI----ERRKIGDDEIVERLVFALVNEGAK 539
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E IA KA+D+D+ + G GFP +R
Sbjct: 540 ILEEKIASKASDIDMVYLTGYGFPLWR 566
>gi|107028915|ref|YP_626010.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Burkholderia
cenocepacia AU 1054]
gi|116689927|ref|YP_835550.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia HI2424]
gi|105898079|gb|ABF81037.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia cenocepacia AU 1054]
gi|116648016|gb|ABK08657.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia cenocepacia HI2424]
Length = 694
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 188/505 (37%), Positives = 276/505 (54%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ GL D + A L+ A +A + + P + E
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDEM-ADGDLLDAAVAFARKVGAQKGPHPRVRDRKIVHE--- 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +FAR AR APN CID +EAGV++G G E E F L+ + ++
Sbjct: 208 NAAGFIQFARNSARAAAPNYPALHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V D L R +++V ++G G MG GIA I + PV L E
Sbjct: 268 LRHAFFGERAASKIPDVPADTPL--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ LE G+ +R N ++VKKGK+TQEK + ++L+T L Y+ K+ D+++EA+ E +
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQEKLDARLALITPTLSYDDLKEADLIVEAVFEELG 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRKLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +DR
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI KFG MGPFR++DL G + A + P+ Y S I + E R G+ T G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLQY-SKIADRLCEQGRFGQKTGAG 564
Query: 420 FYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y RKA P V + + GV + K+ + +IVE + F +VNE ++
Sbjct: 565 WYDYVPGDRKAKPSSLVDEMVVAYSKERGV----ERRKIGDDEIVERLVFALVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
E IA KA+D+D+ + G GFP +R
Sbjct: 621 EEKIASKASDIDMVYLTGYGFPLWR 645
>gi|260219460|emb|CBA26305.1| Peroxisomal bifunctional enzyme [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 707
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 192/509 (37%), Positives = 283/509 (55%), Gaps = 17/509 (3%)
Query: 1 MMLTSKPVKGEEAHSL---GLVDAVVA-PNQLVSTARQWALDILEHR-RPWVATLYKTDK 55
M+++ +PVK E L L D + A P L A +A + + R P V L
Sbjct: 160 MIVSGEPVKSEMLAMLPGQKLFDKLSASPESLAEEALAFARSVADVRPLPLVRDLKCK-- 217
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
P G+A F+FAR + + N P C+DVVEA G+Q E E F L+ +
Sbjct: 218 -HPQGDA--YFQFARNMVKGMSKNFPAPAKCVDVVEAATKKKFDEGMQVEREAFINLMFT 274
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
KSL H+F A+R SK+ V R + VA++G G MG GIA + + PV +
Sbjct: 275 AESKSLRHLFLAERAASKIADVPS-DTPQRAINSVAVIGAGTMGGGIAMNFLNAGIPVKM 333
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E+ ++ L+ GI +R N +++V K K+ Q+K+E+ +SLL+ L Y+ DMVIEA+
Sbjct: 334 LEMKQEALDRGIATIRKNYEAQVVKKKLKQDKYEQRMSLLSTTLSYDDLTGTDMVIEAVF 393
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +K+ +F +L++ P ILASNTST+D+N I T + +VG HFFSPA+VM LL
Sbjct: 394 EELGVKEAVFKELDRVMKPGAILASNTSTLDVNKIANFTQRPEDVVGLHFFSPANVMKLL 453
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR +T+ V+ ++ + KKIKKT +V G C GF NRM Y + L++ G
Sbjct: 454 EVVRGEKTAKDVMATVMSVAKKIKKTAVVSGVCDGFIGNRMIEQYGRQGGFLLDEGCTPE 513
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+A+ +FGM MGPFR+ DL G + A + P Y S ++ E R G+
Sbjct: 514 QVDKAMERFGMAMGPFRMGDLAGNDIGWAIRKRRYLEKPHMKY-SKTADLLCEKGRFGQK 572
Query: 416 TRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T G+Y Y +R A P+ EV IE+ R G I P+ K+S+++IV+ + F +VNEA
Sbjct: 573 TGAGWYDYVPGKRDAIPNAEVVAMIEEHRKALG--ITPR--KISDEEIVQRLVFSLVNEA 628
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA KA+D+DI + G GFP +R
Sbjct: 629 AHILEEGIAAKASDIDIVYIFGYGFPAHR 657
>gi|421476901|ref|ZP_15924758.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans CF2]
gi|400227466|gb|EJO57466.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans CF2]
Length = 694
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 187/508 (36%), Positives = 277/508 (54%), Gaps = 19/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL D + + L V+ AR+ H R D+
Sbjct: 152 MIVSGAPVPSEQLAESGLFDQLADGDLLDAAVAFARKAGAQPGPHPR-------VRDRKI 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + APN P CID +EAGV+ G G E E F L+ +
Sbjct: 205 VHDNAAGFIQFARNSVKAAAPNFPAPHKCIDAIEAGVLHGFDKGSIAEREGFVALMMTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H FF +R SK+P V D + R +++VA++G G MG GIA + + PV L
Sbjct: 265 SRALRHAFFGERAASKIPDVPADTPV--RDIRRVAVIGAGTMGGGIAMNFVNAGLPVTLL 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E ++ LE G+ +R N ++VKKGK+TQEK E ++L+ L Y+ KD D+++EA+ E
Sbjct: 323 ETKQEALERGLATIRKNYDAQVKKGKLTQEKLEARMALIAPTLSYDDLKDADLIVEAVFE 382
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE
Sbjct: 383 ELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLE 442
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G
Sbjct: 443 VVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQ 502
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
IDRAI +FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 503 IDRAIEQFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKT 561
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y R+A P V + + G+ + K+++ +IVE + F +VNE
Sbjct: 562 GAGWYDYAPGDRRARPSALVDEMVVAYSKERGI----ERRKIADDEIVERLVFALVNEGA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ E IA KA+D+D+ + G GFP +R
Sbjct: 618 KILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|221215077|ref|ZP_03588044.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD1]
gi|221165013|gb|EED97492.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD1]
Length = 694
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 187/508 (36%), Positives = 277/508 (54%), Gaps = 19/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL D + + L V+ AR+ H R D+
Sbjct: 152 MIVSGAPVPSEQLAESGLFDQLADGDLLDAAVAFARKAGAQPGPHPR-------VRDRKI 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + APN P CID +EAGV+ G G E E F L+ +
Sbjct: 205 VHDNAAGFIQFARNSVKAAAPNFPAPHKCIDAIEAGVLHGFDKGSIAEREGFVALMMTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H FF +R SK+P V D + R +++VA++G G MG GIA + + PV L
Sbjct: 265 SRALRHAFFGERAASKIPDVPADTPV--RDIRRVAVIGAGTMGGGIAMNFVNAGLPVTLL 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E ++ LE G+ +R N ++VKKGK+TQEK E ++L+ L Y+ KD D+++EA+ E
Sbjct: 323 ETKQEALERGLATIRKNYDAQVKKGKLTQEKLEARMALIAPTLSYDDLKDADLIVEAVFE 382
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE
Sbjct: 383 ELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLE 442
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G
Sbjct: 443 VVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQ 502
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
IDRAI +FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 503 IDRAIEQFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKT 561
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y R+A P V + + G+ + K+++ +IVE + F +VNE
Sbjct: 562 GAGWYDYAPGDRRARPSALVDEMVVAYSKERGI----ERRKIADDEIVERLVFALVNEGA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ E IA KA+D+D+ + G GFP +R
Sbjct: 618 KILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|120611544|ref|YP_971222.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
gi|120590008|gb|ABM33448.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
Length = 699
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 192/517 (37%), Positives = 285/517 (55%), Gaps = 24/517 (4%)
Query: 1 MMLTSKPVKGEEAHSL---GLVDAVVAPNQ-LVSTARQWALDILEHRR-PWVATLYKTDK 55
M+++ +PVK E + L D + A + L A +A + + R P V L
Sbjct: 152 MIVSGEPVKSELIGGMPGQKLFDRMAASAESLAEEALAFARSVADTRPLPLVRNLPAK-- 209
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
P G+A F+FAR + A N P+ C+D VEA GL E E F L+ +
Sbjct: 210 -HPQGDA--YFQFARNMVKGMAKNFPAPLKCVDAVEAATKRKFEDGLAYERELFVNLMWT 266
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++L H+F A+R SK+P V R ++KV ++G G MG GI+ + + PV +
Sbjct: 267 PESRALRHLFLAERAASKIPDVPS-DTPKREIRKVGVIGAGTMGGGISMNFLNAGIPVTI 325
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E ++ L+ G+ +R N +++V K K+ Q+K+E+ ++LLT L+Y+ KDVD+VIEA+
Sbjct: 326 LETKQEALDRGLATIRKNYEAQVAKSKLKQDKYEQRMALLTPTLNYDDLKDVDLVIEAVF 385
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +K+ +F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LL
Sbjct: 386 EEMGVKETVFRKLDEVAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLL 445
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR QT+ V+ ++ + KKIKKT +V G C GF NRM Y+Q A L++ G
Sbjct: 446 EVVRGKQTAKDVLATVMALAKKIKKTAVVSGVCDGFIGNRMIERYSQQAGFLLDEGATPQ 505
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+AI KFG MGPFR+ DL G + A + P+ Y S + E R G+
Sbjct: 506 QVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVERPDMKY-SRTADKLCELGRYGQK 564
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T G+Y Y +R A P V K IE R G I P+ K+S+++IV+ + + +VNE
Sbjct: 565 TGAGWYDYKPGKRDAIPSELVNKMIEDHRKELG--ITPR--KISDEEIVQRLVYALVNEG 620
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRG 511
++ EGIA K+ D+D+ + G GFP IHRG
Sbjct: 621 AKILEEGIASKSGDIDMVYLTGYGFP-------IHRG 650
>gi|445497027|ref|ZP_21463882.1| peroxisomal bifunctional enzyme [Janthinobacterium sp. HH01]
gi|444787022|gb|ELX08570.1| peroxisomal bifunctional enzyme [Janthinobacterium sp. HH01]
Length = 695
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 285/505 (56%), Gaps = 12/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN-QLVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
M+++ PV ++ L D V A + LVS+A +A I + R K D P
Sbjct: 152 MIVSGTPVLSDKLAGTALFDQVFAADADLVSSAVAFAEKIADARPLPKVRDRKVDY--PN 209
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
EA +F+R + A P+ C++ V A V G++ E E F L+++ K
Sbjct: 210 HEA--FLQFSRNTVKAMAGPFPAPLECVETVAASVTMKFEDGMKFERERFLHLIQTTESK 267
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+L H FFA+R SKVP V R +K+ A++G G MG GIA + + PV++ E
Sbjct: 268 ALRHAFFAERVASKVPDVP-ADTPTRAIKQAAVIGAGTMGGGIAMNFLNAGIPVVMLETK 326
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+ +R N ++ +KKGK+TQEKF++ ++L++G L YE D+V+EA+ E++
Sbjct: 327 QEALDKGLATIRKNYENTMKKGKLTQEKFDQRMALVSGTLAYEDIGQADIVVEAVFEDMG 386
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+ +F L++ P ILASNTST+DLN I T ++G HFFSPA+VM LLEIVR
Sbjct: 387 VKETVFRKLDEVMKPGAILASNTSTLDLNQIANFTKRPQDVIGTHFFSPANVMKLLEIVR 446
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT V+ L + KK+KKT +V G C GF NRM Y++ A L+E G +D+
Sbjct: 447 GAQTGKDVLATALALSKKLKKTGVVSGVCDGFIGNRMIEQYSRQAGFLLEEGALPEQVDK 506
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
A+ KFG MGPFR+ DL G + A + PE +Y S ++ E R G+ T G
Sbjct: 507 AVEKFGFAMGPFRMGDLAGNDIGWAIRKRRYVEKPEISY-SRTADLLCEMGRFGQKTGAG 565
Query: 420 FYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y RKA P+ +V I + + GVA K+S+++IVE + + +VNEA +
Sbjct: 566 WYDYKAGDRKAYPNEQVNAMIVQHSADIGVA----RRKISDQEIVERLVYSMVNEAAHIL 621
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA++A+D+D+ + G GFP +R
Sbjct: 622 EEGIALRASDIDMVYLTGYGFPLFR 646
>gi|238026993|ref|YP_002911224.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Burkholderia glumae
BGR1]
gi|237876187|gb|ACR28520.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Burkholderia glumae
BGR1]
Length = 694
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 183/508 (36%), Positives = 282/508 (55%), Gaps = 19/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ + GL D + A + L V+ R+ H R + +
Sbjct: 152 MIVSGAPVPAEQLAASGLFDEIAAGDLLDAAVAFGRRVGAQPGPHPRVRDRAIVHPN--- 208
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
P G +FAR + AP P CID +E+GV++G GL E E F L+++
Sbjct: 209 PAG----FIQFARNSVKAAAPQYPAPHKCIDAIESGVLNGFEQGLADEREGFVALVQTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H FFA+R SK+P V D + R +++VA++G G MG GIA + + PV+L
Sbjct: 265 SRALRHAFFAERAASKIPDVPADTPV--REIRRVAVIGAGTMGGGIAMNFVNAGLPVVLL 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E ++ L+ G+ +R N +++VKKGK+T EK E ++L+T L Y+ + D++IEA+ E
Sbjct: 323 ETKQEALDRGLATIRKNYEAQVKKGKLTAEKLEARLALITPTLSYDDLGEADLIIEAVFE 382
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+Q+F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE
Sbjct: 383 ELGVKEQVFRRLDEVAKPGAILASNTSTLDVDRIAAFTQRPQDVVGMHFFSPANVMKLLE 442
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR +T+ V+ ++ I KKI+KT +V G C GF NRM Y + A ++E G
Sbjct: 443 VVRGEKTAKDVLATVMQIAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQ 502
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+DRAI FG MGPFR++DL G + A + PE Y S I + E R G+ T
Sbjct: 503 VDRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPELHY-SKIADRLCELGRFGQKT 561
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y R+A P V + + +G+ + + + +IVE + + +VNE
Sbjct: 562 GGGWYDYQPGERRAKPSKLVDEMVLAYSKEAGI----ERRAIGDDEIVERLVYALVNEGA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ EGIA KA+D+D+ + G GFP +R
Sbjct: 618 KILEEGIASKASDVDMVYLTGYGFPLWR 645
>gi|326317169|ref|YP_004234841.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323374005|gb|ADX46274.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 699
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 192/517 (37%), Positives = 285/517 (55%), Gaps = 24/517 (4%)
Query: 1 MMLTSKPVKGEEAHSL---GLVDAVVAPNQ-LVSTARQWALDILEHRR-PWVATLYKTDK 55
M+++ +PVK E + L D + A + L A +A + + R P V L
Sbjct: 152 MIVSGEPVKSELIGGMPGQKLFDKMAASAESLAEEALAFARSVADTRPLPLVRNLPAR-- 209
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
P G+A F+FAR + A N P+ C+D VEA GL E E F L+ +
Sbjct: 210 -HPQGDA--YFQFARNMVKGMAKNFPAPLKCVDAVEAATKRKFEDGLAYERELFVNLMWT 266
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++L H+F A+R SK+P V R ++KV ++G G MG GI+ + + PV +
Sbjct: 267 PESRALRHLFLAERAASKIPDVPS-DTPKREIRKVGVIGAGTMGGGISMNFLNAGIPVTI 325
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E ++ L+ G+ +R N +++V KGK+ Q+K+E+ ++LLT L Y+ KDVD+VIEA+
Sbjct: 326 LETKQEALDRGLATIRKNYEAQVAKGKLKQDKYEQRMALLTPTLSYDDLKDVDLVIEAVF 385
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +K+ +F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LL
Sbjct: 386 EEMGVKETVFKKLDEVARPGAILASNTSTLDVDQIAAFTKRPQDVVGMHFFSPANVMKLL 445
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR QT+ V+ ++ + KKIKKT +V G C GF NRM Y+Q A L++ G
Sbjct: 446 EVVRGKQTAKDVLATVMALAKKIKKTAVVSGVCDGFIGNRMIERYSQQAGFLLDEGATPQ 505
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+AI KFG MGPFR+ DL G + A + P+ Y S + E R G+
Sbjct: 506 QVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVERPDMKY-SRTADKLCELGRYGQK 564
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T G+Y Y +R A P V K IE R G I P+ K+S+++IV+ + + +VNE
Sbjct: 565 TGAGWYDYKPGKRDAIPSDLVNKMIEDHRKELG--ITPR--KISDEEIVQRLVYALVNEG 620
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRG 511
++ EGIA K+ D+D+ + G GFP IHRG
Sbjct: 621 AKILEEGIASKSGDIDMVYLTGYGFP-------IHRG 650
>gi|421473060|ref|ZP_15921207.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans ATCC BAA-247]
gi|400221799|gb|EJO52227.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans ATCC BAA-247]
Length = 694
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 187/508 (36%), Positives = 276/508 (54%), Gaps = 19/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL D + + L V+ AR+ H R D+
Sbjct: 152 MIVSGAPVPSEQLAESGLFDQLADGDLLDAAVAFARKAGAQPGPHPR-------VRDRKI 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + APN P CID +EAGV+ G G E E F L+ +
Sbjct: 205 VHDNAAGFIQFARNSVKAAAPNFPAPHKCIDAIEAGVLHGFDKGSIAEREGFVALMMTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H FF +R SK+P V D + R +++VA++G G MG GIA + + PV L
Sbjct: 265 SRALRHAFFGERAASKIPDVPADTPV--RDIRRVAVIGAGTMGGGIAMNFVNAGLPVTLL 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E + LE G+ +R N ++VKKGK+TQEK E ++L+ L Y+ KD D+++EA+ E
Sbjct: 323 ETKQDALERGLATIRKNYDAQVKKGKLTQEKLEARMALIAPTLSYDDVKDADLIVEAVFE 382
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE
Sbjct: 383 ELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLE 442
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G
Sbjct: 443 VVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQ 502
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
IDRAI +FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 503 IDRAIEQFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKT 561
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y R+A P V + + G+ + K+++ +IVE + F +VNE
Sbjct: 562 GAGWYDYAPGDRRARPSALVDEMVVAYSKERGI----ERRKIADDEIVERLVFALVNEGA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ E IA KA+D+D+ + G GFP +R
Sbjct: 618 KILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|221198195|ref|ZP_03571241.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD2M]
gi|221208312|ref|ZP_03581315.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD2]
gi|221171725|gb|EEE04169.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD2]
gi|221182127|gb|EEE14528.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD2M]
Length = 694
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 188/508 (37%), Positives = 274/508 (53%), Gaps = 19/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL D + + L V+ AR+ H R D+
Sbjct: 152 MIVSGAPVPSEQLAESGLFDQLADGDLLDAAVAFARKAGAQPGPHPR-------VRDRKI 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + APN P CID +EAGV+ G G E E F L+ +
Sbjct: 205 VHDNAAGFIQFARNSVKAAAPNFPAPHKCIDAIEAGVLHGFDKGSIAEREGFVALMMTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H FF +R SK+P V D + R +++VA++G G MG GIA + + PV L
Sbjct: 265 SRALRHAFFGERAASKIPDVPADTPV--RDIRRVAVIGAGTMGGGIAMNFVNAGLPVTLL 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E + LE G+ +R N ++VKKGK+TQEK E ++L+ L Y+ KD D+++EA+ E
Sbjct: 323 ETKQDALERGLATIRKNYDAQVKKGKLTQEKLEARMALIAPTLSYDDVKDADLIVEAVFE 382
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE
Sbjct: 383 ELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLE 442
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G
Sbjct: 443 VVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQ 502
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
IDRAI +FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 503 IDRAIEQFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKT 561
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y RKA P V I + G A ++ + +IVE + + +VNE
Sbjct: 562 GAGWYDYAPGERKAKPSKLVDDMIVAFSAEQGAA----RRQIGDDEIVERLVYALVNEGA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ E IA KA+D+D+ + G GFP +R
Sbjct: 618 KILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|121594055|ref|YP_985951.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Acidovorax sp. JS42]
gi|120606135|gb|ABM41875.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. JS42]
Length = 699
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 191/518 (36%), Positives = 290/518 (55%), Gaps = 26/518 (5%)
Query: 1 MMLTSKPVKGEEAHSL---GLVDAVVA-PNQLVSTARQWALDILEHR-RPWVATLYKTDK 55
M+++ +PVK E ++ L D + A P L A +A + + R P V L
Sbjct: 152 MIVSGEPVKSEMIGAVPGQKLFDKMAASPESLAEEALAFAQSVADVRPLPLVRNLPCK-- 209
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
P G+A F+FAR + A N P C+D VEA GL E E F L+ +
Sbjct: 210 -HPEGDA--YFQFARNMVKGMAKNFPAPAKCVDAVEAATKRKFADGLAYERELFINLMWT 266
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRR-VKKVAILGGGLMGSGIATALILSNYPVI 174
++L H+FFA+R SK+P V P+R +KKV ++G G MG GI+ + + PV
Sbjct: 267 PESRALRHLFFAERAASKIPDVPSE--TPKRDIKKVGVIGAGTMGGGISMNFLNAGIPVT 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ E+ ++ L+ GIG ++ N +++VKKGK+ ++K+++ ++LL+ L+Y KD D++IEA+
Sbjct: 325 ILEMKQEALDRGIGTIQKNYEAQVKKGKLKEDKYQQRMALLSTTLNYADLKDCDLIIEAV 384
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E + +K+ +F L+ P ILASNTST+D++ I T +VG HFFSPA+VM L
Sbjct: 385 FEELGVKEAVFKQLDAVAKPGAILASNTSTLDVDKIAAFTQRPQDVVGMHFFSPANVMKL 444
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE+VR T+ V+ ++ + KKIKKT +V G C GF NRM Y+Q A L++ G
Sbjct: 445 LEVVRGKATAKDVLATVMALAKKIKKTAVVSGVCDGFIGNRMIERYSQQAGFLLDEGCTP 504
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
+D+AI KFG MGPFR+ DL G + A + P+ Y S ++ E R G+
Sbjct: 505 QQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVEQPDMKY-SKTADLLCEMGRFGQ 563
Query: 415 TTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
T G+Y Y +R A P V + IE+ R G I P+ K+S+++IV+ + + +VNE
Sbjct: 564 KTGAGWYDYQAGKRDAIPSDVVNQMIEEHRKALG--ITPR--KVSDEEIVQRLVYALVNE 619
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRG 511
++ EGIA K+ D+D+ + G GFP IHRG
Sbjct: 620 GAKILEEGIASKSGDIDMVYLTGYGFP-------IHRG 650
>gi|399546209|ref|YP_006559517.1| peroxisomal bifunctional enzyme [Marinobacter sp. BSs20148]
gi|399161541|gb|AFP32104.1| Peroxisomal bifunctional enzyme [Marinobacter sp. BSs20148]
Length = 697
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 184/500 (36%), Positives = 280/500 (56%), Gaps = 15/500 (3%)
Query: 8 VKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFK 67
V ++A +LG++D V + + +A I + +P DKI + ++F
Sbjct: 159 VGAKDALALGILDVVDDGEDVKAAGLAYAQQIADEGKPVRRVCDLKDKI-AADKGSDVFD 217
Query: 68 FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFA 127
RA +K+A P C+D +EA G+++E E F + + S +H FFA
Sbjct: 218 QFRAVLQKKARGQFSPFKCVDAIEAAFDLPFAEGMKRERELFTECMDSPQRAGQIHSFFA 277
Query: 128 QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGI 187
+R SKV G++ R V V I+G G MG GIA PVI+ E+ ++ L+ G+
Sbjct: 278 EREVSKVKGLSK-DTPVRDVNSVGIIGAGTMGGGIAMNFANVGIPVIIVEMKQEALDKGL 336
Query: 188 GRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFAD 247
G +R N ++ KKG++TQ++ E I+L+TG L Y+ FK VD+VIEA+ EN+++K++IFA
Sbjct: 337 GIIRKNYENSAKKGRLTQQQVEDRIALITGSLSYDDFKSVDLVIEAVFENMAVKKEIFAK 396
Query: 248 LEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQV 307
L+ C P ILASNTST+D++ I T + +VG HFFSPA+VM LLE VR ++TS +V
Sbjct: 397 LDAICKPGTILASNTSTLDVDEIASATRRPEDVVGMHFFSPANVMKLLENVRGSKTSDEV 456
Query: 308 IVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMP 367
++ + KKIKK ++VGNC GF NRM A LV G +D+ +T G P
Sbjct: 457 KATVMAVAKKIKKVGVLVGNCHGFVGNRMLHRRGAEAMTLVNEGATPQQVDKVLTDLGYP 516
Query: 368 MGPFRLADLVGFGVAIATGMQFIE---NFPERTYKSMIIPIMQEDKRAGETTRKGFYLYD 424
MG F ++DL G I G + E N E+ S + + +++ R G+ T G Y Y+
Sbjct: 517 MGQFAMSDLAG----IDVGYRIREERRNAGEQVAPSWMDKLAEQN-RLGQKTMAGVYKYE 571
Query: 425 E-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIA 483
E R PDPEV++ IE R D ++++++I+E + +VNEA ++ EGIA
Sbjct: 572 EGSRNPVPDPEVERIIEDFRKEQ----DISSREITDQEILERCMYVMVNEAAKILEEGIA 627
Query: 484 VKAADLDIASVMGMGFPPYR 503
+A D+D+ + G GFP YR
Sbjct: 628 DRALDIDVVWIYGYGFPAYR 647
>gi|170692430|ref|ZP_02883593.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
gi|170142860|gb|EDT11025.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
Length = 694
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 189/506 (37%), Positives = 280/506 (55%), Gaps = 15/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIE-PL 59
M+++ PV ++ GL D + A L A +A + + P + KIE P
Sbjct: 152 MIVSGAPVDSQKLAGSGLFDEL-AEGDLTQAALAFARKVGAKQGPHPKV--RDRKIEHPN 208
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
E +FAR A N P+ CID VEAGV +G GL E E F L+++ +
Sbjct: 209 AEG--FIQFARNSVAAIAKNFPAPLKCIDAVEAGVKNGFDKGLAFERECFVALVQTPESR 266
Query: 120 SLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+L H FFA+R SK+P V D + R +++VA++G G MG GIA I + PV L E+
Sbjct: 267 ALRHAFFAERAASKIPDVPADTPV--REIRQVAVIGAGTMGGGIAMNFINAGIPVTLLEM 324
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ LE G+ +R N ++ VKKGK+ E ++ ++L+T L Y+ K+ D+++EA+ E +
Sbjct: 325 KQDALERGLATIRNNYEASVKKGKLKPEALQERMALITTTLSYDDLKNADLIVEAVFEEL 384
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+Q+F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+V
Sbjct: 385 GVKEQVFRRLDEIAKPGAILASNTSTLDVDKIAAFTKRPQDVVGTHFFSPANVMKLLEVV 444
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +T+ V+ ++ + KKIKKT +V G C GF NRM Y + A ++E G +D
Sbjct: 445 RGEKTAKDVLATVMKLAKKIKKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVD 504
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
RAI KFG MGPFR++DL G + A + + P+ Y S I + E R G+ T
Sbjct: 505 RAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEQPDMHY-SKIADRLCESGRFGQKTGG 563
Query: 419 GFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y R A P V + I +G + K+ + +IVE + F +VNE ++
Sbjct: 564 GWYDYKAGDRTAYPSKMVDEMIVAYSKETG----SERRKIGDDEIVERLVFALVNEGAKI 619
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP YR
Sbjct: 620 LEEGIASKASDIDMVYLTGYGFPLYR 645
>gi|222111212|ref|YP_002553476.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax ebreus TPSY]
gi|221730656|gb|ACM33476.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax ebreus
TPSY]
Length = 699
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 191/518 (36%), Positives = 289/518 (55%), Gaps = 26/518 (5%)
Query: 1 MMLTSKPVKGEEAHSL---GLVDAVVA-PNQLVSTARQWALDILEHR-RPWVATLYKTDK 55
M+++ +PVK E ++ L D + A P L A +A + + R P V L
Sbjct: 152 MIVSGEPVKSEMIGAVPGQKLFDKMTASPESLAEEALAFARSVADVRPLPLVRNLPCK-- 209
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
P G+A F+FAR + A N P C+D VEA GL E E F L+ +
Sbjct: 210 -HPEGDA--YFQFARNMVKGMAKNFPAPAKCVDAVEAATKRKFADGLAYERELFINLMWT 266
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRR-VKKVAILGGGLMGSGIATALILSNYPVI 174
++L H+FFA+R SK+P V P+R +KKV ++G G MG GI+ + + PV
Sbjct: 267 PESRALRHLFFAERAASKIPDVPSE--TPKRDIKKVGVIGAGTMGGGISMNFLNAGIPVT 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ E+ ++ L+ GIG ++ N +++VKKGK+ ++K+++ ++LL+ L+Y KD D++IEA+
Sbjct: 325 ILEMKQEALDRGIGTIQKNYEAQVKKGKLKEDKYQQRMALLSTTLNYADLKDCDLIIEAV 384
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E + +K+ +F L+ P ILASNTST+D++ I T +VG HFFSPA+VM L
Sbjct: 385 FEELGVKEAVFKQLDAVAKPGAILASNTSTLDVDKIAAFTQRPQDVVGMHFFSPANVMKL 444
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE+VR T+ V+ ++ + KKIKKT +V G C GF NRM Y+Q A L++ G
Sbjct: 445 LEVVRGKATAKDVLATVMALAKKIKKTAVVSGVCDGFIGNRMIERYSQQAGFLLDEGCTP 504
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
+D+AI KFG MGPFR+ DL G + A + P+ Y S ++ E R G+
Sbjct: 505 QQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVEQPDMKY-SKTADLLCEMGRFGQ 563
Query: 415 TTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
T G+Y Y +R A P V + IE R G I P+ K+S+++IV+ + + +VNE
Sbjct: 564 KTGAGWYDYQAGKRDAIPSDVVNQMIEAHRKALG--ITPR--KVSDEEIVQRLVYALVNE 619
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRG 511
++ EGIA K+ D+D+ + G GFP IHRG
Sbjct: 620 GAKILEEGIASKSGDIDMVYLTGYGFP-------IHRG 650
>gi|192292604|ref|YP_001993209.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas palustris TIE-1]
gi|192286353|gb|ACF02734.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Rhodopseudomonas
palustris TIE-1]
Length = 699
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/504 (35%), Positives = 279/504 (55%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EA GLV+ +V LV+ A +A +L +RP K+
Sbjct: 152 MIVGGSPIGAAEALKHGLVEEIV--ENLVAGAVAFAKKVLAEKRPLRRLRDDDSKLAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K+A L P C D + A + GL+KE E F KL+ S+ K+
Sbjct: 210 ADRSIFTNAVAAMTKKARGLEAPFACADAIGAAIDLPFEEGLKKEREGFMKLVVSDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +KV GV D G PR V +VAI+G G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREAAKVDGVPD-GTKPRAVSRVAIIGAGTMGGGIAMSFANAGIPVTLIETGE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+TGV+ E+ KD D++IEA+ E +++
Sbjct: 329 EQLKRGLGIMQKNWEATAARGGLPPDAPAKRMALITGVVGLENVKDADLIIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F ++ + P +LASNTS + ++ I T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFTAIDAHAKPGAVLASNTSYLSIDEIAATTKRPQDVLGMHFFSPANVMKLCEIVRG 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P ++ + I KKI K P+VVG C GF NRM ++ + L+ G +D
Sbjct: 449 AKTAPDALLTAVSIAKKIAKVPVVVGVCDGFVGNRMLAARSKQSEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y++ +A PDPEV+ I + G+ K +++++I+E + +P++NE R+
Sbjct: 562 YKYEQGSRAPMPDPEVETLINDTLAKLGL----KRRDITDEEILERMVYPMINEGARILE 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA + +D+D+ + G G+P YR
Sbjct: 618 EKIAARPSDIDVVWLYGYGWPIYR 641
>gi|410641551|ref|ZP_11352071.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
gi|410645290|ref|ZP_11355757.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
gi|410135220|dbj|GAC04156.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
gi|410139084|dbj|GAC10258.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
Length = 702
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/511 (36%), Positives = 286/511 (55%), Gaps = 23/511 (4%)
Query: 1 MMLTSKPVKGEEAHSL-GLVDAVVA-PNQLVSTARQWALDILEHRRPWVATLYKTDKIE- 57
M+++ +P E+A L G+ D VV P L+S + D++ + A + KT +E
Sbjct: 152 MIVSGRP---EKASKLDGVFDLVVEDPTNLLSEGMAFVQDVIANG----AKVRKTSDVEI 204
Query: 58 -PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E+F R +KQA P CI VEA V GL +E E F + + S+
Sbjct: 205 DKASAPDELFAQYRQGLKKQARGFFAPERCIQAVEASVALPFEQGLVREGELFMECMASK 264
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++ H FFA+R + V D R +KKV I+G G MG GIA + PV++
Sbjct: 265 EARAQQHFFFAERAAAHVSDY-DKSTPTRDIKKVGIIGAGTMGGGIAMNFANAGIPVVML 323
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E+ ++ L+ G+ +R N ++ KKGK+TQ+ E ++LL G +YE+ DVD+VIEA+ E
Sbjct: 324 ELKQEALDKGLALIRKNYENSAKKGKLTQQAVEDRMALLQGSTEYEALSDVDLVIEAVFE 383
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+S+K+++F L+K C P ILASNTST+D+N I T + ++G HFFSPA+VM LLE
Sbjct: 384 KMSVKKEVFGALDKVCKPGAILASNTSTLDVNEIAASTSRPEDVIGLHFFSPANVMKLLE 443
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+V+ +TSP+VI + + KKI K ++VG C GF NRM PY + A L+ G
Sbjct: 444 VVKAEKTSPEVIKTSMQMAKKINKVAVLVGVCFGFVGNRMIEPYGREAARLMLEGATPQQ 503
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAI---ATGMQFIENFPERTYKSMIIPIMQEDKRAG 413
+D+ I FG+PMGPF + D+ G + + +FI + P +Y ++ + + R G
Sbjct: 504 VDKVIYDFGLPMGPFTMGDMAGLDIGYYVRESRREFIAHDP--SY-CVVSDRLVKQGRVG 560
Query: 414 ETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
+ +G Y+Y+ R PDPEV + ++ G+ + +S+++I+E I FP++N
Sbjct: 561 LKSGRGAYMYEPGNRMPIPDPEVVEMAKEEAERLGI----EQRDISDQEILERIIFPLIN 616
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E + EGIA K++D+D+ V G GFP YR
Sbjct: 617 EGALILEEGIAAKSSDIDVIYVYGYGFPVYR 647
>gi|332306389|ref|YP_004434240.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
4H-3-7+YE-5]
gi|332173718|gb|AEE22972.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
4H-3-7+YE-5]
Length = 702
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/511 (36%), Positives = 286/511 (55%), Gaps = 23/511 (4%)
Query: 1 MMLTSKPVKGEEAHSL-GLVDAVVA-PNQLVSTARQWALDILEHRRPWVATLYKTDKIE- 57
M+++ +P E+A L G+ D VV P L+S + D++ + A + KT +E
Sbjct: 152 MIVSGRP---EKASKLDGVFDLVVEDPTNLLSEGMAFVQDVIANG----AKVRKTSDVEI 204
Query: 58 -PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E+F R +KQA P CI VEA V GL +E E F + + S+
Sbjct: 205 DKASAPDELFAQYRQGLKKQARGFFAPERCIQAVEASVALPFEQGLVREGELFMECMASK 264
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++ H FFA+R + V D R +KKV I+G G MG GIA + PV++
Sbjct: 265 EARAQQHFFFAERAAAHVSDY-DKSTPTRDIKKVGIIGAGTMGGGIAMNFANAGIPVVML 323
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E+ ++ L+ G+ +R N ++ KKGK+TQ+ E ++LL G +YE+ DVD+VIEA+ E
Sbjct: 324 ELKQEALDKGLALIRKNYENSAKKGKLTQQAVEDRMALLQGSTEYEALSDVDLVIEAVFE 383
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+S+K+++F L+K C P ILASNTST+D+N I T + ++G HFFSPA+VM LLE
Sbjct: 384 KMSVKKEVFGALDKVCKPGAILASNTSTLDVNEIAASTSRPEDVIGLHFFSPANVMKLLE 443
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+V+ +TSP+VI + + KKI K ++VG C GF NRM PY + A L+ G
Sbjct: 444 VVKAEKTSPEVIKTSMQMAKKINKVAVLVGVCFGFVGNRMIEPYGREAARLMLEGATPQQ 503
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAI---ATGMQFIENFPERTYKSMIIPIMQEDKRAG 413
+D+ I FG+PMGPF + D+ G + + +FI + P +Y ++ + + R G
Sbjct: 504 VDKVIYDFGLPMGPFTMGDMAGLDIGYYVRESRREFIAHDP--SY-CVVSDRLVKQGRVG 560
Query: 414 ETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
+ +G Y+Y+ R PDPEV + ++ G+ + +S+++I+E I FP++N
Sbjct: 561 LKSGRGAYMYEPGNRMPIPDPEVVEMAKEEAERLGI----EQRDISDQEILERIIFPLIN 616
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E + EGIA K++D+D+ V G GFP YR
Sbjct: 617 EGALILEEGIAAKSSDIDVIYVYGYGFPVYR 647
>gi|410635272|ref|ZP_11345887.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola lipolytica E3]
gi|410145245|dbj|GAC13092.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola lipolytica E3]
Length = 706
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/509 (36%), Positives = 276/509 (54%), Gaps = 19/509 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA-PNQLVSTAR----QWALDILEHRRPWVATLYKTDK 55
M+++ KPVK + G+ D +V P +L+S ++ Q D E +R K +
Sbjct: 156 MIVSGKPVKAAALN--GVFDLIVDDPAKLMSESQAFVAQLINDGCEIKR------VKDIE 207
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
I+ E+F R KQA P CI VEA V + GLQKEAE F + +RS
Sbjct: 208 IDTETAPSELFSQYRQGIAKQARGFFSPERCIQAVEAAVTLPLKDGLQKEAELFMECMRS 267
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++ H FFA++ V D R +K V I+G G MG GIA + PV++
Sbjct: 268 PQARAQQHFFFAEKAAGHVSDY-DKSTPVRDIKSVGIIGAGTMGGGIAMNFANAGIPVVM 326
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E+ + LE G+G +R N ++ KKGK++Q+ E ++LL G +Y DVD+VIEA+
Sbjct: 327 LELKAEALEKGLGVIRRNYENSAKKGKLSQQDLEDRMALLHGTTEYSGLADVDLVIEAVF 386
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +K+Q+F L+ C ILASNTST+D+N I + T + ++G HFFSPA+VM LL
Sbjct: 387 EKMDVKKQVFTQLDAICKKGAILASNTSTLDINEIADCTSRPEDVIGLHFFSPANVMKLL 446
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+V+ +TS VI + + KKI+K ++VG C GF NRM PY + A ++ G D
Sbjct: 447 EVVKGEKTSADVIKTSMQLAKKIRKVAVLVGVCFGFVGNRMIEPYGREANRMMLEGADPE 506
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+DR I FG+PMGPF + D+ G + E+ +++ + +D RAG
Sbjct: 507 HVDRVIYDFGLPMGPFTMGDMAGLDIGYFVRQSRKEHIAHDPSYAVVADRLVKDGRAGLK 566
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KG YLY+ RK PDP V + ++ GV K K S+++I+E F ++NE
Sbjct: 567 VGKGVYLYEAGNRKPIPDPTVAQIAKEEAEKLGV----KPRKHSDEEILERCIFTLINEG 622
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA K++D+D+ V G GFP +R
Sbjct: 623 AHILEEGIAAKSSDIDVIYVYGYGFPVFR 651
>gi|158424497|ref|YP_001525789.1| enoyl-CoA hydratase [Azorhizobium caulinodans ORS 571]
gi|158331386|dbj|BAF88871.1| enoyl-CoA hydratase [Azorhizobium caulinodans ORS 571]
Length = 691
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 184/507 (36%), Positives = 277/507 (54%), Gaps = 25/507 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MM +PV E+A ++GLVD + A LV+TA AL + E W + K
Sbjct: 152 MMAGGEPVSAEKARAMGLVDDI-ADGDLVATAATQALRLAEAGT-WPRSGAAESKFS--A 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E R F+ A + A +++P + + V G+ G GL E F +L++ T K+
Sbjct: 208 EDRAAFETAASDAIRKSPRMPNVAALAHAVRVGLEKGLAEGLAAERAAFLELVKDPTSKA 267
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+FFA+R ++VPG+ + R V A++G G MG GIA + PV L EV E
Sbjct: 268 LRHLFFAEREAARVPGIGKE-VKARPVASAAVIGAGTMGGGIAMCFAQAGIPVTLIEVKE 326
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L AG+ R+R+N ++ VK+G +T EK E+ + +TG + E+ + D+V+EA E++ +
Sbjct: 327 EALSAGLARIRSNYETSVKRGSLTSEKMERHLGFITGRVGLEAAAEADIVVEAAFEDMGV 386
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K +IF L++ P ILA+NTS +D+N I E T +VG HFFSPA+VM LLEIVR
Sbjct: 387 KAEIFGALDRLAKPGAILATNTSYLDVNAIAETTKRPQDVVGLHFFSPANVMRLLEIVRG 446
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P V+V LD+ +KI K P+VVG C GF NRM TQAA L+ G + +D A
Sbjct: 447 AKTAPDVLVTSLDLARKIGKLPVVVGVCYGFVGNRMLAKRTQAAERLLLAGAMPHEVDDA 506
Query: 361 ITKFGMPMGPFRLADLVGFGVAI----ATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+T FG MGPF ++DL G + ATG K+ + + E G+ T
Sbjct: 507 VTDFGFRMGPFAMSDLAGLDIGWRARKATGA-----------KAPVADALAEQGFFGQKT 555
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
+GFY Y E RK DP+ + I + G+ S ++I+ + +P+VNE
Sbjct: 556 GRGFYRYPEGARKGERDPDTEALITRLSDERGI----TRRSFSREEIIARLMYPMVNEGA 611
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
++ EGIA +++D+D+ V G +P +
Sbjct: 612 KILEEGIASRSSDVDVVWVNGYNWPNF 638
>gi|387902459|ref|YP_006332798.1| enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
gi|387577351|gb|AFJ86067.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
Length = 694
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 185/508 (36%), Positives = 275/508 (54%), Gaps = 19/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ + GL DA+ + L V+ ARQ H R D+
Sbjct: 152 MIVSGAPVPSEQLATSGLFDAMADGDLLDAAVAFARQAGAQSGPHPR-------VRDRKI 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR AR APN P CID +EAGV+ G G E + F L+ +
Sbjct: 205 VHENAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLHGFDKGSVAERDGFVALMMTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H FF +R SK+P V D + R +++V ++G G MG GIA + + PV L
Sbjct: 265 SRALRHAFFGERAASKIPDVPADTPV--REIRRVGVVGAGTMGGGIAMNFVNAGLPVTLL 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E + L+ G+ +R N ++V+KGK+TQ+K + ++L+T L Y+ D D+V+EA+ E
Sbjct: 323 ETTQDALDRGLATIRKNYDAQVRKGKLTQQKLDARMALITPTLSYDDLHDADLVVEAVFE 382
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+Q+F L+ P ILASNTST+D++ I T +VG HFFSPA+VM LLE
Sbjct: 383 ELGVKEQVFGRLDAVAKPGAILASNTSTLDIDRIAAFTKRPQDVVGMHFFSPANVMKLLE 442
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G
Sbjct: 443 VVRGANTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQ 502
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+DRAI KFG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 503 VDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCELGRFGQKT 561
Query: 417 RKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y R A P V + + + GV + K+ + +IVE + F +VNE
Sbjct: 562 GGGWYDYVAGERTAKPSALVDEMVVAYSNERGV----ERRKIGDDEIVERLVFALVNEGA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ E IA KA+D+D+ + G GFP +R
Sbjct: 618 KILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|39936778|ref|NP_949054.1| enoyl-CoA hydratase [Rhodopseudomonas palustris CGA009]
gi|39650635|emb|CAE29158.1| enoyl-CoA hydratase [Rhodopseudomonas palustris CGA009]
Length = 699
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 179/504 (35%), Positives = 279/504 (55%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EA GLV+ VV LV+ A +A +L +RP K+
Sbjct: 152 MIVGGSPIGAAEALKHGLVEEVV--ENLVAGAVAFAKKVLAEKRPLRRLRDDDSKLAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K+A L P C D + A + GL+KE E F KL+ S+ K+
Sbjct: 210 ADRSIFTNAVAAMTKKARGLEAPFACADAIGAAIDLPFEEGLKKEREGFMKLVVSDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +KV GV D G PR V +VAI+G G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREAAKVDGVPD-GTKPRPVSRVAIIGAGTMGGGIAMSFANAGIPVTLIETGE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+TG++ E+ KD D++IEA+ E +++
Sbjct: 329 EQLKRGLGIMQKNWEATAARGGLPPDAPAKRMALITGLVGLENVKDADLIIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F ++ + P +LASNTS + ++ I T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFTAVDAHAKPGAVLASNTSYLSIDEIAATTKRPQDVLGMHFFSPANVMKLCEIVRG 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P ++ + I KKI K P+VVG C GF NRM ++ + L+ G +D
Sbjct: 449 AKTAPDALLTAVSIAKKIAKVPVVVGVCDGFVGNRMLAARSKQSEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y++ +A PDPEV+ I + G+ K +++++I+E + +P++NE R+
Sbjct: 562 YKYEQGSRAPMPDPEVETLINDTLAKLGL----KRRDITDEEILERMVYPMINEGARILE 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA + +D+D+ + G G+P YR
Sbjct: 618 EKIAARPSDIDVVWLYGYGWPIYR 641
>gi|410632204|ref|ZP_11342868.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
gi|410148204|dbj|GAC19735.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
Length = 710
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 191/509 (37%), Positives = 290/509 (56%), Gaps = 19/509 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVV-APNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
M+++ +PV ++ G+ D VV +P L+S+A + ++ T +I+
Sbjct: 162 MIVSGRPVAAKKLP--GVFDVVVDSPETLLSSALAFCEKVVAEGSKVRKTC--DVQIDVS 217
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+E+F R QA P CI VEA V GL +E E F + +RS+ +
Sbjct: 218 TAPKELFAQYRKGLATQARGFFAPERCIQAVEASVELPFAEGLVREGELFMECMRSKEAR 277
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ H FFA+R S V D R +K V I+G G MG GIA + PVI+ E+
Sbjct: 278 AQQHFFFAERAASHVKDF-DKETPVRDIKTVGIIGAGTMGGGIAMNFANAGIPVIMLELK 336
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+ +R N ++ KKGK+T E+ E ++LLTG +Y + DVD+VIEA+ E +S
Sbjct: 337 QEALDKGLALIRKNYENSAKKGKLTAEQVEDRMALLTGSTEYAALSDVDLVIEAVFEKMS 396
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+KQ++F L+ C P ILASNTST+D++ IGE T + ++G HFFSPA+VM LLE+V+
Sbjct: 397 VKQEVFKALDAVCKPGAILASNTSTLDIDEIGEATKRPEDVIGLHFFSPANVMKLLEVVK 456
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYT-QAAFLLVERGTDLYLID 358
T++TSP+VI + + KKI K ++VG C GF NRM Y +A +++E GT + ID
Sbjct: 457 TSKTSPEVIKTAMKMAKKINKVAVLVGVCFGFVGNRMIEGYGREANRMMLEGGTPEH-ID 515
Query: 359 RAITKFGMPMGPFRLADLVGFGVAI---ATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+ I FG+PMGPF + D+ G + + +FI++ P TY ++ + E R G
Sbjct: 516 KVIYDFGLPMGPFTMGDMAGQDIGAFVRESRREFIKHDP--TY-CILADKLVEQGRVGLK 572
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KG YLY+ RK PDP V + ++ + GVA +S+++I+E I FP++NE
Sbjct: 573 AGKGVYLYEAGNRKPIPDPSVLELAKQVAADLGVAQ----RDISDQEIIERIIFPMINEG 628
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA K++D+D+ V G GFP YR
Sbjct: 629 ALILEEGIAAKSSDIDVIYVYGYGFPVYR 657
>gi|307729675|ref|YP_003906899.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1003]
gi|307584210|gb|ADN57608.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1003]
Length = 694
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 186/506 (36%), Positives = 279/506 (55%), Gaps = 15/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIE-PL 59
M+++ PV ++ GL D +V L +TA +A + P + KIE P
Sbjct: 152 MIVSGTPVDSQQLAGSGLFDELVQ-GDLATTALAFARKVGAKEGPH--PTVRERKIEHPN 208
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
E +FAR A + P+ CID VEAGV G GL E E F L+++ +
Sbjct: 209 AEG--FLQFARNSVAAVAKHFPAPLKCIDAVEAGVKHGFDKGLAVERECFTALVQTPESR 266
Query: 120 SLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+L H FF +R SK+P V D + R +++VA++G G MG GIA I + PV L E+
Sbjct: 267 ALRHAFFGERAASKIPDVPADTPV--REIRRVAVIGAGTMGGGIAMNFINAGIPVTLLEM 324
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
++ LE G+ +R+N ++ VKKGK+ E + ++L+ L Y+ K D+++EA+ E +
Sbjct: 325 KQEALERGLATIRSNYEASVKKGKLKPEAVAERMALIAPTLSYDDLKSADLIVEAVFEEL 384
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+V
Sbjct: 385 GVKEQVFRRLDEIARPGAILASNTSTLDVNRIASFTKRPQDVVGMHFFSPANVMKLLEVV 444
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +D
Sbjct: 445 RGKETAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVD 504
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
RAI KFG MGPFR++DL G + A + + P+ Y S I + E R G+ T
Sbjct: 505 RAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEQPDMHY-SKIADRLCETGRFGQKTGG 563
Query: 419 GFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y R A P V + I +G + K+ +++IVE + F +VNE ++
Sbjct: 564 GWYDYKPGERTAQPSKLVDEMIVAYSKETGT----ERRKIGDEEIVERLVFALVNEGAKI 619
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP +R
Sbjct: 620 LEEGIASKASDIDMVYLTGYGFPLHR 645
>gi|295688202|ref|YP_003591895.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Caulobacter
segnis ATCC 21756]
gi|295430105|gb|ADG09277.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Caulobacter
segnis ATCC 21756]
Length = 692
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 176/503 (34%), Positives = 275/503 (54%), Gaps = 14/503 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + + V + AH++GL D +V L + A +A ++ RP DK+E
Sbjct: 155 MVTSGQHVPAKAAHAMGLFDELVEEGSLRAGAIAFARKVVAENRPLKKVRELNDKVEAAR 214
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EIF+ RA K+ P I VEA V GL++E F +L+ +
Sbjct: 215 GKPEIFESFRAANAKKFRGFMAPENNIKCVEAAVNLPFDEGLKEERRLFMELMTGSQSAA 274
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
++FFA+R +K+P V D VKKV ++G G MG GIA + + PV + E +
Sbjct: 275 QRYVFFAERQAAKIPDVPD-DTPTIPVKKVGVIGAGTMGGGIAMNFLNAGIPVTIIEAKQ 333
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ LE G+G +R N ++ KKG++TQ+ EK + LLT ++ E+ D DM+IEA+ E + +
Sbjct: 334 ENLERGVGVIRKNYENTAKKGRLTQDDVEKRMGLLTPSMEMEALADCDMIIEAVFELMEI 393
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++FA L+K P ILA+NTS +D+N I T + ++G HFFSPA+VM LLE+VR
Sbjct: 394 KKEVFAKLDKIAKPGAILATNTSYLDVNEIAAVTSRPESVIGTHFFSPANVMRLLELVRG 453
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TS +VI + + K I K ++VG C GF NRM + A L+ G + +DR
Sbjct: 454 DKTSKEVIATCMKLSKTIGKVAVLVGVCYGFVGNRMLAQRQREAQKLILEGAMPWDVDRV 513
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG+PMGPF ++DL G + +T S + ++ E R G+ KGF
Sbjct: 514 LYDFGLPMGPFAMSDLAGLDIGWDA---------SKTSSSTVREVLCEMDRRGQKNGKGF 564
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y YDE R ASP P V++ I + + +++++I+E +P+VNE ++ E
Sbjct: 565 YDYDENRNASPSPVVEQVIRDFAEKRQI----QRRTITDQEILERCLYPMVNEGAKILEE 620
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G A++A+D+DI + G G+P YR
Sbjct: 621 GKAIRASDIDIVWINGYGWPVYR 643
>gi|134295941|ref|YP_001119676.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia vietnamiensis G4]
gi|134139098|gb|ABO54841.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia vietnamiensis G4]
Length = 694
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 184/508 (36%), Positives = 275/508 (54%), Gaps = 19/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ + GL DA+ + L V+ ARQ H R D+
Sbjct: 152 MIVSGAPVPSEQLATSGLFDAMADGDLLDAAVAFARQAGAQSGPHPR-------VRDRKI 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR AR APN P CID +EAGV+ G G E + F L+ +
Sbjct: 205 VHENAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLHGFDKGSVAERDGFVALMMTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H FF +R SK+P V D + R ++++ ++G G MG GIA + + PV L
Sbjct: 265 SRALRHAFFGERAASKIPDVPADTPV--REIRRIGVVGAGTMGGGIAMNFVNAGLPVTLL 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E + L+ G+ +R N ++V+KGK+TQ+K + ++L+T L Y+ D D+V+EA+ E
Sbjct: 323 ETTQDALDRGLATIRKNYDAQVRKGKLTQQKLDARMALITPTLSYDDLHDADLVVEAVFE 382
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+Q+F L+ P ILASNTST+D++ I T +VG HFFSPA+VM LLE
Sbjct: 383 ELGVKEQVFGRLDAVAKPGAILASNTSTLDIDRIAAFTKRPQDVVGMHFFSPANVMKLLE 442
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G
Sbjct: 443 VVRGANTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQ 502
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+DRAI KFG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 503 VDRAIEKFGFAMGPFRMSDLAGNDIGWAIRRRRYVEQPDLHY-SKIADRLCELGRFGQKT 561
Query: 417 RKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y R A P V + + + GV + K+ + +IVE + F +VNE
Sbjct: 562 GGGWYDYVAGERTAKPSALVDEMVVAYSNERGV----ERRKIGDDEIVERLVFALVNEGA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ E IA KA+D+D+ + G GFP +R
Sbjct: 618 KILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|407695494|ref|YP_006820282.1| 3-hydroxyacyl-CoA dehydrogenase [Alcanivorax dieselolei B5]
gi|407252832|gb|AFT69939.1| 3-hydroxyacyl-CoA dehydrogenase [Alcanivorax dieselolei B5]
Length = 694
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 182/509 (35%), Positives = 282/509 (55%), Gaps = 21/509 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ PVK + A +G+VD VV+ L+ A +A ++ + P L + ++
Sbjct: 152 MIVGGNPVKAKNALQMGIVDDVVS-GDLLEGALAYARKLVADKAP----LRRIRDLDVQT 206
Query: 61 EAREIF-KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
E ++F + ++ ARKQ P CI V+A V G+++E E F +LL S
Sbjct: 207 EEADLFASYEKSIARKQR-GFKAPFHCIKAVQAAVELPFEEGMKRERELFGELLVSSESA 265
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ H+FFA+R +KVPG+ R V VA++G G MG GIA + PV + EV
Sbjct: 266 AQRHVFFAEREVAKVPGLPK-DTPKREVNSVAVIGAGTMGGGIAMNFANAGIPVKILEVK 324
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
E+ LE GI +R N ++ KKG++TQE+ E+ ++L+ L Y+ DVD+VIEA+ EN+S
Sbjct: 325 EEALEKGIAIIRKNYENTAKKGRLTQEQVEQRMALIQPTLSYDDLGDVDVVIEAVFENMS 384
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+ +F +L++ C P ILA+NTST+D+N I T ++G HFFSPA+VM LLE VR
Sbjct: 385 VKEAVFNELDRVCKPGAILATNTSTLDVNRIASFTKRPQDVIGMHFFSPANVMKLLENVR 444
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+T+ VI ++D+ ++I K ++VG C GF NRM A LV G + +D+
Sbjct: 445 GEKTADDVIATVMDLSRRIGKVGVLVGVCHGFVGNRMLHKRQAEAVQLVNEGANPAQVDK 504
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQF----IENFPERTYKSMIIPIMQEDKRAGET 415
+ G PMGPF ++DL G V + EN P R + ++ E+ R G+
Sbjct: 505 VLFDLGFPMGPFAMSDLAGMDVGYRIREELRKENPENAPARNWTDELV----ENGRMGQK 560
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T+ G + Y E R P EV K I K R +G+A ++++++I+E + +VNE
Sbjct: 561 TQAGVFDYKEGDRTPVPSAEVDKIIAKFREENGIAT----REVTDQEILERCMYVMVNEG 616
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ EGIA + D+D+ + G GFP YR
Sbjct: 617 AKILEEGIAARPLDVDVIWIYGYGFPVYR 645
>gi|389876490|ref|YP_006370055.1| peroxisomal bifunctional enzyme [Tistrella mobilis KA081020-065]
gi|388527274|gb|AFK52471.1| peroxisomal bifunctional enzyme [Tistrella mobilis KA081020-065]
Length = 710
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 180/506 (35%), Positives = 286/506 (56%), Gaps = 14/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ T K V +A LG++DAVV ++L+ A +A ++E P +K++
Sbjct: 163 MITTGKFVPAGKALQLGIIDAVV--DELIPGAVAFARKLVEDGAPLRRVRDMDEKVKAFD 220
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGP-RAGLQKEAEDFQKLLRSETCK 119
A+ R Q K A P+ C D V AG V+ P GL+ E E F L+ S+ K
Sbjct: 221 AAK--LPEIRKQVVKAARGQMSPVGCFDAV-AGAVTLPFDEGLKNEREIFGGLMASDQSK 277
Query: 120 SLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+L HIFFA+R K+P V D P +++ AI+G G MG GIA + PV + E+
Sbjct: 278 ALRHIFFAEREALKIPDVPGDTPTLP--IRQAAIIGAGTMGGGIAMNFANAGIPVKVLEM 335
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ LE G+G +RAN + V KG++TQ+ +K + L+ GVLDY++ KD D++IEA+ E +
Sbjct: 336 SADALERGLGIIRANYAATVSKGRLTQDAMDKRMGLIEGVLDYDALKDADIIIEAVFEEM 395
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+++F+ L+ P +LASNTST+D++ I T + ++G HFFSPA+VMPLLE+V
Sbjct: 396 DIKKKVFSTLDAVAKPGAVLASNTSTLDIDEIAATTSRPEFVIGTHFFSPANVMPLLELV 455
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +TS QVI + + K I K P++VGNC GF NRM PY Q L++ G +D
Sbjct: 456 RGAKTSYQVISTSMKLAKTIGKVPVLVGNCDGFVGNRMLEPYVQQGELMLVEGALPAQVD 515
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+ ++G+ MGPF + D+ G V+ + + + + E R G+ T+
Sbjct: 516 GVLQRWGLAMGPFTMGDMAGLDVSWRIRKRRAATRRNDLFWPTVSDQICEMGRFGQKTKA 575
Query: 419 GFYLYD-ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+YLY+ R DP++++ I +A +GV + ++SE +I++ + ++NE +
Sbjct: 576 GYYLYEGGSRTPVTDPKIEQLIVEASKAAGV----ERREISEDEILKRSLYALINEGAKC 631
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EG+A++A+D+D+ G GFP +R
Sbjct: 632 LEEGMAIRASDIDVIYCFGYGFPAWR 657
>gi|186475793|ref|YP_001857263.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phymatum STM815]
gi|184192252|gb|ACC70217.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia phymatum
STM815]
Length = 694
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 173/439 (39%), Positives = 249/439 (56%), Gaps = 7/439 (1%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
+FAR A P CID +EAGV+ G G++ E E F L+++ K+L H F
Sbjct: 213 IQFARNSVAGVAKQYPAPHKCIDAIEAGVLKGFDHGVKVERECFLALVQTPESKALRHAF 272
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
F +R SK+P V A R + KV ++G G MG GIA + + PV L E+ + LE
Sbjct: 273 FGERAASKIPDVPSDTPA-RNIDKVGVIGAGTMGGGIAMNFVNAGLPVTLLEMKQDALER 331
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
G+ +R N ++ VKKGK+T E E+ +SL+T L YE+ D D++IEA+ E + +K+Q+F
Sbjct: 332 GLATIRKNYEATVKKGKLTMEALEQRMSLITPTLTYEALGDADLIIEAVYEELGVKEQVF 391
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
L++ P ILASNTST+DLN I T +VG HFFSPA+VM LLE+VR T+
Sbjct: 392 TRLDEVAKPGAILASNTSTLDLNKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKDTAK 451
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +D+AI KFG
Sbjct: 452 DVLATVMQVAKKIRKTAVVSGVCDGFIGNRMVEQYVRQALFMLEEGALPAQVDKAIEKFG 511
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE 425
MGPFR++DL G + A + + P Y S I + E R G+ T G+Y Y
Sbjct: 512 FAMGPFRMSDLAGNDIGWAIRKRRYQEEPHMRY-SKIADRLCEAGRFGQKTGGGWYDYKA 570
Query: 426 -RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
R A P + + I G+ + K+S+ +IVE + F +VNE ++ EGIA
Sbjct: 571 GDRNAYPSKPIDEMIVAHSKELGI----ERRKISDDEIVERLVFALVNEGAKILEEGIAS 626
Query: 485 KAADLDIASVMGMGFPPYR 503
KA+D+D+ + G GFP +R
Sbjct: 627 KASDIDMVYLTGYGFPLWR 645
>gi|365898261|ref|ZP_09436229.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. STM 3843]
gi|365421006|emb|CCE08771.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. STM 3843]
Length = 698
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 281/504 (55%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EAH GL++ +V S +A ++ RP K+
Sbjct: 152 MIVGGDPIGAAEAHKAGLIEEIV--EGPASGGEAFARKVVAEGRPLRKLRDDDSKLAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K++ L P+ D V + GL+KE EDF +LL S+ K+
Sbjct: 210 ADRSIFTSAVAALTKKSRGLEAPLAAADAVGYAIDLPFDEGLKKEREDFLRLLTSDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R SK+ GV + G R V++VAI+G G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREASKIAGVPE-GTKSRPVQRVAIIGAGTMGGGIAMSFANAGVPVTLIETGE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+ GV+ E+ +D D+VIEA+ E +++
Sbjct: 329 EQLKRGLGIMQKNWEATAARGGIPADAPAKRMALINGVVGLENVRDADLVIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L+++ P +LASNTS ++++ I ++T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFGKLDQFAKPGAVLASNTSYLNIDEIAKQTSRPQDVLGMHFFSPANVMKLCEIVRA 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P +V + I +KI K P VVG C GF NRM + A L+ G +D
Sbjct: 449 EKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQAEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ +A PDP+V+K I++ + G+ K +S+++I+E + +P++NE ++ A
Sbjct: 562 YKYEAGSRAPLPDPDVEKLIDETLARLGL----KKRVVSDEEILERMMYPMINEGAKILA 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ + G G+P YR
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYR 641
>gi|316933001|ref|YP_004107983.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein
[Rhodopseudomonas palustris DX-1]
gi|315600715|gb|ADU43250.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
[Rhodopseudomonas palustris DX-1]
Length = 699
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 287/534 (53%), Gaps = 16/534 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EA GLV+ +V LV+ A +A ++ +RP K+
Sbjct: 152 MIVGGSPIGAAEALKHGLVEEIV--ENLVAGAVAFAKKVVAEKRPTRRLRDDDSKLAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K+A L P C D + A + GL+KE E F KL+ S+ K+
Sbjct: 210 ADRSIFTNAVAAMTKKARGLEAPFACADAIGAAIDLPFEEGLKKEREGFMKLVVSDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +KV GV D G PR V +VAI+G G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREAAKVDGVPD-GTKPRPVSRVAIIGAGTMGGGIAMSFANAGIPVTLIETGE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+TGV+ E+ KD D++IEA+ E +++
Sbjct: 329 EQLKRGLGIMQKNWEATAARGGLPPDAPAKRMALITGVVGLENVKDADLIIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F ++ + P +LASNTS + ++ I T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFTAIDAHAKPGAVLASNTSYLSIDDIAAVTKRPQDVLGMHFFSPANVMKLCEIVRG 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P ++ + I KKI K P+VVG C GF NRM ++ + L+ G +D
Sbjct: 449 AKTAPDALLTAVSIAKKIAKVPVVVGVCDGFVGNRMLAARSKQSEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ +A PDPEV+ I + G+ K +++++I+E + +P++NE R+
Sbjct: 562 YKYEAGSRAPMPDPEVETLINDTLAKLGL----KRRDITDEEILERMVYPMINEGARILE 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCYFDQGRNHV 533
E IA + +D+D+ + G G+P YR +H S L Y+ + N +
Sbjct: 618 EKIAARPSDIDVVWLYGYGWPIYRGGP-MHYADSVGLKHIAERLAYYAKATNDL 670
>gi|365891756|ref|ZP_09430138.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. STM 3809]
gi|365332258|emb|CCE02669.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. STM 3809]
Length = 697
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 279/504 (55%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EAH GL++ +V S ++A ++ RP KI
Sbjct: 152 MIVGGDPISAAEAHKAGLIEEIV--EGPASGGVEFARKVVAENRPLRKLRDDDSKIAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K++ L P D V + GL++E E F KLL S+ K+
Sbjct: 210 ADRSIFTNAVAAITKKSRGLEAPFAAADAVGYAIDLPFDEGLKREREGFLKLLTSDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +K+ GV + G R+V++VAI+G G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREAAKIAGVPE-GTKGRKVERVAIIGAGTMGGGIAMSFANAGIPVTLIETAE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+ G + E+ KD D+VIEA+ E +++
Sbjct: 329 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALIDGKVGLENVKDADLVIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L++Y P +LASNTS ++++ I T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFGKLDQYAKPGAVLASNTSYLNIDAIAAETSRPQDVLGMHFFSPANVMKLCEIVRA 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++T+P +V + I +KI K P VVG C GF NRM + A L+ G +D
Sbjct: 449 DKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQAEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ +A PDP+V+K I++ + G+ K +S+++I+E + +P++NE ++ A
Sbjct: 562 YKYESGSRAPLPDPDVEKLIDETLAKLGL----KRRNVSDEEILERMMYPMINEGAKILA 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ + G G+P YR
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYR 641
>gi|365883354|ref|ZP_09422509.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 375]
gi|365288201|emb|CCD95040.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 375]
Length = 697
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 279/504 (55%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EAH GL++ +V S ++A ++ RP KI
Sbjct: 152 MIVGGDPISAAEAHKSGLIEEIV--EGPASGGVEFARKVVAENRPLRKLRDDDSKIAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K++ L P D V + GL++E E F KLL S+ K+
Sbjct: 210 ADRSIFTNAVAAITKKSRGLEAPFAAADAVGYAIDLPFDEGLKREREGFLKLLTSDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +K+ GV + G R+V++VAI+G G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREAAKIAGVPE-GTKGRKVERVAIIGAGTMGGGIAMSFANAGIPVTLIETAE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+ G + E+ KD D+VIEA+ E +++
Sbjct: 329 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALIDGKVGLENVKDADLVIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L++Y P +LASNTS ++++ I T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFGKLDQYAKPGAVLASNTSYLNIDAIAAETSRPQDVLGMHFFSPANVMKLCEIVRA 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TSP +V + I +KI K P VVG C GF NRM + A L+ G +D
Sbjct: 449 DKTSPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQAEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ +A PDP+V+K I++ + G+ K +S+++I+E + +P++NE ++ A
Sbjct: 562 YKYESGSRAPLPDPDVEKLIDETLAKLGL----KRRNVSDEEILERMMYPMINEGAKILA 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EG+A + +D+D+ + G G+P YR
Sbjct: 618 EGVAARPSDIDVVWLYGYGWPIYR 641
>gi|333915071|ref|YP_004488803.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
gi|333745271|gb|AEF90448.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
Length = 699
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/509 (36%), Positives = 285/509 (55%), Gaps = 17/509 (3%)
Query: 1 MMLTSKPVKGEEAHSL---GLVDAVVA-PNQLVSTARQWALDILEHR-RPWVATLYKTDK 55
M+++ +PVK E S+ L D + A P L+ A+ +AL++ + R P V L
Sbjct: 152 MIVSGEPVKSELLASIPGQKLFDKMAASPESLLDEAKAFALEVADKRPLPRVRDLPCK-- 209
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
P G+A F+FAR + A N P C+D VE G+ E + F +L+ S
Sbjct: 210 -HPQGDA--YFQFARNMVKGMAKNYPAPARCVDTVENAARKKFDEGMALERDAFMQLMWS 266
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++L H+F A+R SK+ V A R +K V ++G G MG GI+ + + PV +
Sbjct: 267 PESRALRHLFMAERAASKIADVPS-DTAVRDIKTVGVIGAGTMGGGISMNFLNAGIPVTI 325
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E ++ L+ G+ +R N +++VKKGK+TQEK+++ ++LL+ L Y++ K+ D++IEA+
Sbjct: 326 LETKQEALDRGVATIRKNYEAQVKKGKLTQEKYDQRMALLSTTLSYDALKNADLIIEAVF 385
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +K+ +F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LL
Sbjct: 386 EELGVKETVFKQLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLL 445
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR T+ V+ ++ + KKIKKT +V G C GF NRM Y++ A L++ G
Sbjct: 446 EVVRGKHTAKDVLATVMKLAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPA 505
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+AI KFG MGPFR+ DL G + A + + Y S + E R G+
Sbjct: 506 QVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVERADMKY-SRTADKLCELGRFGQK 564
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T G+Y Y +R A P V + IE R G I P+ K+S+++IV+ + F +VNE
Sbjct: 565 TGAGWYDYQAGKRDAIPSELVNQMIESHRKELG--ITPR--KISDEEIVQRLVFALVNEG 620
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ +GIA K+ D+D+ + G GFP +R
Sbjct: 621 AHILEDGIAGKSGDIDMVYLTGYGFPIWR 649
>gi|323526029|ref|YP_004228182.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1001]
gi|323383031|gb|ADX55122.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein protein
[Burkholderia sp. CCGE1001]
Length = 694
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 184/506 (36%), Positives = 277/506 (54%), Gaps = 15/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIE-PL 59
M+++ PV ++ S GL D +V L A +A + P + KI+ P
Sbjct: 152 MIVSGAPVDSQKLASSGLFDELV-EGDLAEAALAFARKVGAQAGPHPKV--RERKIDHPN 208
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
E +FAR A + P+ CID VEAGV G GL E E F L+++ +
Sbjct: 209 AEG--FIQFARNSVAAVAKHFPAPLKCIDAVEAGVKHGFDKGLAFERECFVALVQTPESR 266
Query: 120 SLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+L H FF +R SK+P V D + R +++VA++G G MG GIA + + PV L E+
Sbjct: 267 ALRHAFFGERAASKIPDVPADTPV--REIRRVAVIGAGTMGGGIAMNFVNAGIPVTLLEM 324
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
++ L+ G+ +R N ++ VKKGK+ E E ++L+T L Y+ KD D+++EA+ E +
Sbjct: 325 KQEVLQRGLATIRGNYEASVKKGKLKAEALEARMALITPTLSYDDLKDADLIVEAVFEEL 384
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+V
Sbjct: 385 GVKEQVFRRLDEIAKPGAILASNTSTLDVNRIAAFTKRAQDVVGMHFFSPANVMKLLEVV 444
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +T+ V+ ++ + K+I+KT +V G C GF NRM Y + A ++E G +D
Sbjct: 445 RGKETAKDVLATVMKLAKQIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVD 504
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
RAI KFG MGPFR++DL G + A + + P+ Y S I + E R G+ T
Sbjct: 505 RAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEQPDLHY-SKIADRLCETGRFGQKTGG 563
Query: 419 GFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y R A P V I ++ + K+ + +IVE + F +VNE ++
Sbjct: 564 GWYDYAAGERTARPSTLVDDMIVAYSK----EVNAERRKIGDDEIVERLVFALVNEGAKI 619
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP +R
Sbjct: 620 LEEGIASKASDIDMVYLTGYGFPLHR 645
>gi|395762316|ref|ZP_10442985.1| 3-hydroxyacyl-CoA dehydrogenase [Janthinobacterium lividum PAMC
25724]
Length = 695
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 193/515 (37%), Positives = 276/515 (53%), Gaps = 32/515 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ L D V AP D+L+ VA K + PL
Sbjct: 152 MIVSGTPVASEKLAGTALFDEVTAPGA----------DLLQAA---VAFATKVADVRPLP 198
Query: 61 EARE----------IFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQ 110
RE +F+R + + P+ C+D V A V GLQ E E F
Sbjct: 199 TVRERKVDYPNHAAFLQFSRNTVKAMSGPFPAPLKCVDAVAAAVTMTFDEGLQYERELFM 258
Query: 111 KLLRSETCKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILS 169
+L++S K+L H FFA+R SKVP V +D + R + AI+G G MG+GIA +
Sbjct: 259 QLVQSPVSKALRHAFFAERLASKVPDVPSDTPV--RAIASAAIVGAGTMGAGIAMNFANA 316
Query: 170 NYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDM 229
V L E ++ L+ G+ +R N ++ VKKGK+TQEK E+ I+L++G L Y D+
Sbjct: 317 GIAVTLLETRQEALDKGLATIRKNYENTVKKGKLTQEKAEQRIALVSGTLAYADIAQADI 376
Query: 230 VIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPA 289
VIEA+ E +++K+ +F L+ P ILASNTST+DL+ I T ++G HFFSPA
Sbjct: 377 VIEAVFEELAVKEAVFKQLDAVMKPGAILASNTSTLDLDKIAAFTQRPQDVIGTHFFSPA 436
Query: 290 HVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVE 349
+VM LLEIVR QT V+ L + KK+KKT +V G C GF NRM Y++ A L+E
Sbjct: 437 NVMKLLEIVRGAQTGKDVLATALALSKKLKKTGVVSGVCDGFIGNRMIEQYSRQAGFLLE 496
Query: 350 RGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQED 409
G +D+A+ KFG MGPFR+ DL G + A + P TY S ++ E
Sbjct: 497 EGCLPEQVDKAVEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVEKPAVTY-SKTADLLCEL 555
Query: 410 KRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFF 468
R G+ T G+Y Y RKA P +V I + + GVA K+S+++IVE + +
Sbjct: 556 GRYGQKTGAGWYDYKAGDRKAYPSEQVNAMIVQHCADIGVARR----KVSDQEIVERLVY 611
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+VNE R+ EGIA +A+D+D+ + G GFP +R
Sbjct: 612 ALVNEGARILEEGIAQRASDIDMVYLTGYGFPLFR 646
>gi|113867537|ref|YP_726026.1| enoyl-CoA hydratase/Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase
[Ralstonia eutropha H16]
gi|113526313|emb|CAJ92658.1| Enoyl-CoA hydratase/Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase
[Ralstonia eutropha H16]
Length = 693
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/437 (38%), Positives = 254/437 (58%), Gaps = 8/437 (1%)
Query: 68 FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFA 127
FAR A N P+ C++ V AG + GL++E E F L+ + ++L H FF
Sbjct: 215 FARNTVAAMAKNFPAPLKCLEAV-AGSLKPFEQGLKQEREGFLYLVTTPESRALRHAFFG 273
Query: 128 QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGI 187
+R SK+P V + G R+++KVA++G G MG GI+ + + PV + E ++ L+ G+
Sbjct: 274 ERAASKIPDVPE-GTPTRKIEKVAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGV 332
Query: 188 GRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFAD 247
G +R N ++ KKGK+TQEK E+ + LL+ L Y+ KD D++IEA+ E + +K+ +F
Sbjct: 333 GIIRKNYENSAKKGKLTQEKVEQRMGLLSTTLSYDDLKDADLIIEAVFEEMGVKETVFKK 392
Query: 248 LEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQV 307
L++ ILASNTST+D+N I T +VG HFFSPA+VM LLE+VR +T V
Sbjct: 393 LDEVAKQGAILASNTSTLDVNKIASFTKRPQDVVGMHFFSPANVMKLLEVVRGEKTGKDV 452
Query: 308 IVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMP 367
+ ++ +GKKIKKT +V G C GF NRM Y++ A L++ G +D+AI KFG
Sbjct: 453 LATVMQVGKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFA 512
Query: 368 MGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-R 426
MGPFR+ DL G + A + + PE Y S ++ E R G+ T G+Y Y
Sbjct: 513 MGPFRMGDLAGNDIGWAIRKRRAVDKPEIQY-SKTADLLCEMGRFGQKTGAGWYDYKAGD 571
Query: 427 RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKA 486
RK P+ +V I + G+ K+S+++IVE + F +VNE R+ EGIA KA
Sbjct: 572 RKPYPNQQVNDMIVQHSKDLGIT----RRKISDEEIVERLVFALVNEGARILEEGIASKA 627
Query: 487 ADLDIASVMGMGFPPYR 503
+D+D+ + G GFP +R
Sbjct: 628 SDIDMVYLTGYGFPLFR 644
>gi|399073892|ref|ZP_10750710.1| 3-hydroxyacyl-CoA dehydrogenase [Caulobacter sp. AP07]
gi|398041049|gb|EJL34131.1| 3-hydroxyacyl-CoA dehydrogenase [Caulobacter sp. AP07]
Length = 692
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 175/503 (34%), Positives = 275/503 (54%), Gaps = 16/503 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ T + V + A ++GL D++V + L A +A +L +P + K+E
Sbjct: 155 MVTTGQHVPAKAALAMGLFDSIVEEDALRDGAIAFARVVLAEDKPLTRIRDQNAKVEAAR 214
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EIF RA ++ P I +EA V GL++E + F +L+ +
Sbjct: 215 GKPEIFSEFRAANARKFRGFLAPENNIKCIEAAVNLPFDEGLKEERKLFMELMTGSQSAA 274
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
H+FFA+R +K+P V D + P V+KV ++G G MG GI+ + + PV + E
Sbjct: 275 QRHVFFAERQAAKIPDVPDDTAIIP--VRKVGVIGAGTMGGGISMNFLNAGIPVTIIEAK 332
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+G +R N ++ KKG++TQ+ EK ++LLT + E D D++IEA+ E +
Sbjct: 333 QENLDRGVGVIRKNYENTAKKGRLTQDDVEKRMALLTPSMHLEDLADCDLIIEAVFELME 392
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+KQ++F L+K P ILASNTS +D+++I T + ++G HFFSPA+VM LLEIVR
Sbjct: 393 IKQEVFGKLDKIAKPGAILASNTSYLDIDVIAASTSRPESVIGLHFFSPANVMRLLEIVR 452
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+T VI + IGKKI K ++VGNC GF NRM + A L+ G + +DR
Sbjct: 453 GAKTDKSVIATSMQIGKKIGKVAVLVGNCHGFVGNRMLAQRQREAQKLILEGAMPWDVDR 512
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
+ FG+PMGPF ++DL G + P +T S + ++ E R G+ KG
Sbjct: 513 VLYDFGLPMGPFAMSDLAGLDIGWD---------PAKTSSSTVREVLCEMDRRGQKNGKG 563
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
FY YDE R A P EV+K I + + ++S+++I+E +P+VNE ++
Sbjct: 564 FYDYDENRVAKPSAEVEKVILDFAEKRQI----QRREISDQEILERCLYPMVNEGAKILE 619
Query: 480 EGIAVKAADLDIASVMGMGFPPY 502
EG A++A+D+D + G G+P Y
Sbjct: 620 EGKAIRASDIDTVWINGYGWPVY 642
>gi|335423412|ref|ZP_08552434.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Salinisphaera
shabanensis E1L3A]
gi|334891993|gb|EGM30238.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Salinisphaera
shabanensis E1L3A]
Length = 695
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 178/505 (35%), Positives = 283/505 (56%), Gaps = 15/505 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
++ KP+K + +G++D VV+ L + A +A ++ P K ++ E
Sbjct: 153 IVEGKPMKAAKLKDMGVIDEVVS-GDLKAEAIAYAEKLVADGAP----RRKVSELSVEKE 207
Query: 62 AREIF-KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ +F +F ++ ARK+ L P CI V+A AG+++E E F +LL S +
Sbjct: 208 SDNVFSEFEQSIARKKRGFLA-PFHCIKAVQAATELDFAAGMKRERELFTELLNSPESAA 266
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRR-VKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
H+FFA+R KVPG++ P+R +K+V I+G G MG GIA + + PV + E+
Sbjct: 267 QRHVFFAEREVGKVPGISKE--TPKRDIKQVGIIGAGTMGGGIAMNFLSAGIPVKMLEMK 324
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+ +R N ++ KKG+MT ++ EK +SL++ L Y+ DVD+VIEA+ EN+
Sbjct: 325 QEALDKGVALIRKNYEATAKKGRMTSDQVEKCMSLISTSLSYDDLSDVDLVIEAVFENMK 384
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F +L++ C ILA+NTST+D+N I + T + ++G HFFSPA+VM LLE VR
Sbjct: 385 VKKQVFGELDRVCKDGAILATNTSTLDVNEIAQSTNRPEDVIGMHFFSPANVMKLLENVR 444
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
TS +VI ++D+ K+I K ++VG C GF NR+ A LV G +D+
Sbjct: 445 GEATSDEVIATVMDLSKRIGKVGVLVGVCNGFVGNRILHKRQAQAVKLVNEGATPSQVDK 504
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
+ FG+PMGPF +ADL G V E+ PE + + + E +R G+ T G
Sbjct: 505 VLFDFGLPMGPFAMADLAGLDVGWRIREGLREDDPENAPERDWMDALAEQERWGQKTGGG 564
Query: 420 FYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+ Y E R P IEK R G+ + ++S+++I+E + +VNE ++
Sbjct: 565 VFDYAEGDRTPRPSDTAMAEIEKYRKEKGI----ETREVSDQEILERCLYVMVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+DI + G GFP YR
Sbjct: 621 EEGIAMRPLDVDIVWIYGYGFPVYR 645
>gi|167569618|ref|ZP_02362492.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
oklahomensis C6786]
Length = 694
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 275/507 (54%), Gaps = 17/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL D +V + L V+ AR+ H R + +
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDELVEGDLLDAAVAFARKVGAASGPHPRVRDREIVHQN--- 208
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + A + P CID +EAGV+ G GL E + F L+++
Sbjct: 209 ----AAGFIQFARNSVKALAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFIALVQTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L H FF +R SK+P V G R ++ VA++G G MG GIA + + PV L E
Sbjct: 265 SRALRHAFFGERAASKIPDVP-AGTPARAIESVAVIGAGTMGGGIAMNFLNAGLPVTLLE 323
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L+ G+ +R N ++VKKGK+TQEK + ++L+ L Y+ KD D+VIEA+ E
Sbjct: 324 TKQDALDRGLATIRKNYDAQVKKGKLTQEKLDARMALVKPTLAYDDLKDADLVIEAVFEE 383
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+
Sbjct: 384 LGVKEQVFRRLDEVAKPGAILASNTSTLDVNKIAAFTKRPQDVVGMHFFSPANVMKLLEV 443
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR + T+ V+ ++ I KKI+KT +V G C GF NRM Y + A ++E G +
Sbjct: 444 VRGDATAKDVLATVMQIAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQV 503
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI KFG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 504 DRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTG 562
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y RKA P V + + GV + ++ + +IVE + + +VNE +
Sbjct: 563 AGWYDYVPGDRKAQPSKLVDEMVAAYSKERGV----ERRRIGDAEIVERLVYALVNEGAK 618
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E IA KA+D+D+ + G GFP +R
Sbjct: 619 ILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|167581600|ref|ZP_02374474.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis TXDOH]
Length = 694
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 187/508 (36%), Positives = 277/508 (54%), Gaps = 19/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL DA V + L V+ AR+ H R D+
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGDLLDAAVAFARKAGAASGPHPR-------VRDREI 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + A + P CID +EAGV+ G GL E + F L+++
Sbjct: 205 VHDNAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H FF +R SK+P V D + R +K VA++G G MG GIA + + PV L
Sbjct: 265 SRALRHAFFGERAASKIPDVPADTPV--REIKSVAVIGAGTMGGGIAMNFLNAGLPVTLL 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E ++ L+ G+ +R N ++VKKGK+TQEK + ++L+ L Y+ KD D+VIEA+ E
Sbjct: 323 ETKQEALDRGLATIRRNYDAQVKKGKLTQEKLDARMALIRPTLAYDDLKDADLVIEAVFE 382
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE
Sbjct: 383 ELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKIAAFTKRPQDVVGMHFFSPANVMKLLE 442
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G
Sbjct: 443 VVRGGQTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQ 502
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+DRAI FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 503 VDRAIENFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKT 561
Query: 417 RKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y R+A P V + I S G+ + ++ + +IVE + + +VNE
Sbjct: 562 GAGWYDYVPGERRAKPSKLVDEMIVAYSSERGL----ERREIGDDEIVERLVYALVNEGA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ E IA KA+D+D+ + G GFP +R
Sbjct: 618 KILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|383758293|ref|YP_005437278.1| 3-hydroxyacyl-CoA dehydrogenase [Rubrivivax gelatinosus IL144]
gi|381378962|dbj|BAL95779.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Rubrivivax gelatinosus IL144]
Length = 702
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 256/440 (58%), Gaps = 9/440 (2%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
F+FAR + A + P C+D VEA V AGL E E F L+ + ++L H F
Sbjct: 219 FQFARNTVKAMARHFPAPAKCVDAVEAAVKRDIDAGLAYERELFMALMFTPESQALRHAF 278
Query: 126 FAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLE 184
FA+R SK+P V D L RR+ KV ++G G MG GI+ + + PV + E + LE
Sbjct: 279 FAERAASKIPDVPEDTQL--RRIAKVGVVGAGTMGGGISMNFLNAGLPVTILETTAEALE 336
Query: 185 AGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQI 244
G+ +R N +++V+KGK+ ++K+++ ++LLT L Y D D+VIEA+ E++ +KQQ+
Sbjct: 337 RGVATIRRNYEAQVRKGKLKEDKYQQRMALLTTTLSYADLADCDLVIEAVYEDLGVKQQV 396
Query: 245 FADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTS 304
F L++ P ILASNTST+DLN I T +VG HFFSPA+VM LLE+VR +T+
Sbjct: 397 FGALDEVVKPGAILASNTSTLDLNRIAGFTKRPADVVGMHFFSPANVMKLLEVVRGEKTA 456
Query: 305 PQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKF 364
V+ ++ + K I+KT +V G C GF NRM Y++ A L+E G +D+A+ F
Sbjct: 457 KDVLATVMQLAKTIRKTAVVSGVCDGFIGNRMIEQYSRQAGFLLEEGCTPQQVDKAVEAF 516
Query: 365 GMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYD 424
G MGPFR+ DL G + A + P+ Y S ++ E R G+ T G+Y Y
Sbjct: 517 GFAMGPFRMGDLAGNDIGWAIRKRRYVEQPQMRY-SQTADLLCEMGRYGQKTGAGWYDYA 575
Query: 425 E-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIA 483
+R A P P V++ + + R +G+ I + +S+ +IV + + +VNE ++ +GIA
Sbjct: 576 PGKRDAIPSPVVEEMVAQHR--AGLGITAR--TISDDEIVHRLVYALVNEGAKILEDGIA 631
Query: 484 VKAADLDIASVMGMGFPPYR 503
KA+D+D+ + G GFP +R
Sbjct: 632 SKASDIDMVYLTGYGFPLWR 651
>gi|418293237|ref|ZP_12905154.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064637|gb|EHY77380.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 701
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 181/506 (35%), Positives = 270/506 (53%), Gaps = 12/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ P+ EA +VD + L +A ++ R T +T IE
Sbjct: 152 MIVSGTPIGAAEAVEHHIVDELF-EGDLREAGLAYARRMVGEGRAPRRTGEQTRGIEG-A 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ + + A+ K+ P L P+ CI VEA GL++E E F + L S +
Sbjct: 210 DNEALIRAKHAEVAKRMPGLFSPLRCIAAVEAATKLPLAEGLKRERELFAECLNSPQRGA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLA--PRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
LVH FFA+R K+ DL A PR + A++GGG MG GIA + + PV L E+
Sbjct: 270 LVHSFFAERQAGKI---NDLSAAVKPRSINTAAVIGGGTMGVGIALSFANAGVPVKLLEI 326
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
NE+ L+ G+ R R + VK+G +T++ E+ ++L+TGV DY D D+V+EA+ E +
Sbjct: 327 NEQALQRGLQRTRETYAASVKRGSLTEDAMEQRLALITGVTDYAVLADADVVVEAVFEEM 386
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+KQQ+F L+ C P ILASNTS++DLN I T + +VG HFFSPA+VM LLE+V
Sbjct: 387 GVKQQVFEQLDAVCKPGAILASNTSSLDLNAIAAFTKRPEDVVGLHFFSPANVMRLLEVV 446
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +TS +V+ + IGK++KK +VVG C GF NRM F Y + A L+E G +D
Sbjct: 447 RGEKTSDEVLATAMAIGKQLKKVSVVVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVD 506
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ FGM MGPF + DL G + A + P + + G+ T
Sbjct: 507 AALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDNLCAAGMLGQKTGA 566
Query: 419 GFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y+ R A +P++ +E A G+ + L E+ IVE F +VNE ++
Sbjct: 567 GYYRYEPGNRTAQENPDLAPMLEAASQEKGI----ERQTLDEQYIVERCIFALVNEGAKI 622
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA +++D+D+ + G GFP +R
Sbjct: 623 LEEGIAQRSSDIDVIYLNGYGFPAFR 648
>gi|320165951|gb|EFW42850.1| peroxisomal bifunctional enzyme [Capsaspora owczarzaki ATCC 30864]
Length = 720
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 184/520 (35%), Positives = 284/520 (54%), Gaps = 27/520 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAV-------VAPNQLVSTARQWALDI----LEHRRPWVAT 49
++++ + + A LGL+D + A L+ A ++A I L+ RR V+
Sbjct: 153 LIVSGQHISAAAALKLGLIDQIFQAGAPAAAEGTLLDRAVEYAQGIASRPLDGRR--VSE 210
Query: 50 LYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDF 109
L DK + +++ A A + Q PI ++ V A + G+ KE E
Sbjct: 211 LVPRDK--STFDQSDVWDKALATVKAQHRGYDAPIRIVEAVRAAAQLPFKQGMAKEYELV 268
Query: 110 QKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILS 169
L++ +L H+FFA+R VPG+ P V+ V +LG G MG+GIA + +
Sbjct: 269 VNLMKGPQASALQHLFFAEREVGTVPGLNPSLAKP--VRSVGVLGAGTMGAGIAMVFLNA 326
Query: 170 NYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDM 229
PV+L + ++FL+ G+ +RA S VKKGK+T+E K ++LLT LDY +F +VD+
Sbjct: 327 KIPVVLLDTKQEFLDRGLAGIRAVYASDVKKGKLTEEALAKRLALLTPTLDYAAFANVDL 386
Query: 230 VIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPA 289
IEA+ EN+ +K+Q+FA L+ C P ILASNTST++++ + T ++ +G HFFSPA
Sbjct: 387 AIEAVFENMDIKKQVFAKLDAVCKPEAILASNTSTLNIDEMAAATKRPEQFIGTHFFSPA 446
Query: 290 HVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVE 349
+VM LLE VR ++SP I ++ + K IKK ++VGNC GF NRM Y + A ++E
Sbjct: 447 NVMRLLENVRGKKSSPSTIATVMALSKTIKKVGVLVGNCDGFVGNRMLEGYAREASFMLE 506
Query: 350 RGTDLYLIDRAITKFGMPMGPFRLADL----VGFGVAIATGMQFIENFPERTYKSMII-P 404
G +D+ +T FGM MGPF++ DL VG+ + GM P + + +
Sbjct: 507 EGALPAQVDKVLTSFGMAMGPFQMGDLAGNDVGWRIRQGKGMTNPATRPAKEGRYCELGD 566
Query: 405 IMQEDKRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIV 463
+ E R G+ G+Y Y++ +RKA PD V K IE S G+A +S+++I
Sbjct: 567 KLCELGRFGQKAGAGWYKYEQGQRKAIPDDAVAKLIEAHSSSKGIA----RRSISDEEIF 622
Query: 464 EMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E +P++NE +V EGIA++ D+DI G GFP YR
Sbjct: 623 ERCMYPLINEGFKVLEEGIALRPGDIDIIWAYGYGFPRYR 662
>gi|429211033|ref|ZP_19202199.1| enoyl-CoA hydratase [Pseudomonas sp. M1]
gi|428158447|gb|EKX04994.1| enoyl-CoA hydratase [Pseudomonas sp. M1]
Length = 693
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 283/521 (54%), Gaps = 34/521 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDIL-EHRRPWVATLYKTDKIEPL 59
M+++ PVK +A G++D +V L +A +L E R P +T + +
Sbjct: 152 MIVSGNPVKAPQAVEYGILDELV-DGDLAEAGLAYARRLLDEGRGP-----RRTGERQVQ 205
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
G+A + A+ +K+ P L P+ C+ VEA GL++E E FQ+ L S
Sbjct: 206 GDA-ALIAAKHAEVQKRMPGLFSPLRCVAAVEAASRLPLAEGLKRERELFQECLESPQRA 264
Query: 120 SLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+L+H FFA+R +K+ G+ D + R V+ A++GGG MG GIA PV L EV
Sbjct: 265 ALIHAFFAEREAAKIAGLPADTQV--REVRTAAVIGGGTMGVGIALCFANVGIPVKLLEV 322
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ L+ + R RA Q+ V++G +T + EK + L+ GVL+Y + DVD+ IEA+ E++
Sbjct: 323 DGAALDRALQRARATYQASVERGSLTSDAMEKRLGLIQGVLNYAALADVDLAIEAVFESL 382
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+Q+F L+ C P ILASNTS++DL+ I T +VG HFFSPA+VM LLE+V
Sbjct: 383 EVKRQVFERLDAVCKPGAILASNTSSLDLDAIAAFTRRPQDVVGLHFFSPANVMRLLEVV 442
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +TS +V+ + +GK++KK + VG C GF NRM F Y + A L+E G +D
Sbjct: 443 RGRETSAEVLASAMQLGKRLKKVAVAVGVCDGFVGNRMIFQYGRQAEFLLEEGASPAQVD 502
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIAT------GMQFIENFP---ERTYKSMIIPIMQED 409
A+ FGM MGP + DL G ++ A G++ + P + Y + ++
Sbjct: 503 AALRDFGMAMGPLAVRDLSGLDISHAIRERQRPGLEPGQTLPTVLDHLYAAGML------ 556
Query: 410 KRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFF 468
G+ T GFYLY + R +P + +E+A + G+ P +S + IVE F
Sbjct: 557 ---GQKTGAGFYLYPQGSRTPQDNPALPAMLEQAAATRGIVRQP----VSAEHIVERCLF 609
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIH 509
+VNEA R+ EGIA +A+D+D+ + G GFP +R H
Sbjct: 610 ALVNEAARILDEGIAQRASDVDLIFLNGYGFPAWRGGPLFH 650
>gi|127513792|ref|YP_001094989.1| 3-hydroxyacyl-CoA dehydrogenase [Shewanella loihica PV-4]
gi|126639087|gb|ABO24730.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Shewanella loihica PV-4]
Length = 708
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 172/508 (33%), Positives = 281/508 (55%), Gaps = 12/508 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN-QLVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
M+ + +P+ G++D + + A +A +++ +P + + ++
Sbjct: 154 MITSGRPLGAAAMLDAGVIDNLYQDGGNFIQAAVDFAQELVAQHKPKRSCFEMS--VDTS 211
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+ EIF RA +++ P CI VEA GL++E + F + L + +
Sbjct: 212 NISSEIFNEFRAAIARRSRGYYAPERCIQAVEAACELPLAEGLKREHQLFMECLDTPQAR 271
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ H+FFA+RG +K+PG+ A R ++KVA++G G MG GIA I P + ++N
Sbjct: 272 AQQHLFFAERGVAKIPGINPKTTATREIRKVAVIGSGTMGGGIAMNFINVGIPTQILDLN 331
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ LE G+G +R N + +KKGK++Q + ++ ++LL+G DY DVD+VIEA+ E +
Sbjct: 332 GEALERGLGVIRKNYEYTLKKGKLSQAQLDERMALLSGTTDYADIADVDLVIEAVFEKME 391
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L+ C P ILA+NTST+D++ I T ++G HFFSPA+VM LLEIVR
Sbjct: 392 IKKQVFKTLDATCKPGAILATNTSTLDVDEIAAETSRPQDVLGLHFFSPANVMRLLEIVR 451
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
N+T+P ++ + + ++IKK P+V G C GF NR Y + + L+ G ID+
Sbjct: 452 ANKTAPDALLTTVQLAQRIKKVPVVSGVCWGFIGNRATDSYLRESMSLILEGASPAQIDK 511
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQ---FIENFPERTYKSMIIPIMQEDKRAGETT 416
T+FGMPMG + DL G V I T F + + I+ + +R G+ T
Sbjct: 512 VHTEFGMPMGLPSMVDLAGIDVGILTREDRKAFTTDLDPSHFA--ILHKLYAKQRYGQKT 569
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARSMSGVA-IDPKFAKLSEKDIVEMIFFPVVNEAC 475
+G Y+Y+ R K DPEV + +A GV P+ ++S+++I+E +P++NE
Sbjct: 570 GRGLYIYEGRDKQE-DPEVLELAAEAAKEFGVTRRSPE--QISDQEILERTIYPIINEGA 626
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ EGIA++A+D+DI G GFP +R
Sbjct: 627 RILEEGIALRASDIDIVLAYGFGFPIFR 654
>gi|83721623|ref|YP_442663.1| fatty oxidation complex subunit alpha [Burkholderia thailandensis
E264]
gi|167619716|ref|ZP_02388347.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis Bt4]
gi|257138876|ref|ZP_05587138.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis E264]
gi|83655448|gb|ABC39511.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis E264]
Length = 694
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 187/508 (36%), Positives = 277/508 (54%), Gaps = 19/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL DA V + L V+ AR+ H R D+
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGDLLDAAVAFARKAGAASGPHPR-------VRDREI 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + A + P CID +EAGV+ G GL E + F L+++
Sbjct: 205 VHDNAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFGKGLAFERDCFVALVQTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H FF +R SK+P V D + R +K VA++G G MG GIA + + PV L
Sbjct: 265 SRALRHAFFGERAASKIPDVPADTPV--REIKSVAVIGAGTMGGGIAMNFLNAGLPVTLL 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E ++ L+ G+ +R N ++VKKGK+TQEK + ++L+ L Y+ KD D+VIEA+ E
Sbjct: 323 ETKQEALDRGLATIRRNYDAQVKKGKLTQEKLDARMALIRPTLAYDDLKDADLVIEAVFE 382
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE
Sbjct: 383 ELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKIAAFTKRPQDVVGMHFFSPANVMKLLE 442
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR QT+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G
Sbjct: 443 VVRGGQTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQ 502
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+DRAI FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 503 VDRAIETFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKT 561
Query: 417 RKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y R+A P V + I S G+ + ++ + +IVE + + +VNE
Sbjct: 562 GAGWYDYVPGERRAKPSKLVDEMIVAYSSERGL----ERREIGDDEIVERLVYSLVNEGA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ E IA KA+D+D+ + G GFP +R
Sbjct: 618 KILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|121608757|ref|YP_996564.1| 3-hydroxyacyl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
gi|121553397|gb|ABM57546.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Verminephrobacter eiseniae EF01-2]
Length = 699
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 173/447 (38%), Positives = 263/447 (58%), Gaps = 13/447 (2%)
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRA-GLQKEAEDFQKLLRSETCK 119
E + F+FAR + + N P +C+D VEA GP A G+Q E F KL+++ +
Sbjct: 212 EGQAYFQFARNMVKGMSRNFPAPALCVDAVEA-ATRGPFADGMQIERAIFMKLMQTPESR 270
Query: 120 SLVHIFFAQRGTSKVPGV-TDLGLAPRR-VKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L H+F A+R SK+P V +D PRR ++ VA++G G MG GIA + + PV + E
Sbjct: 271 ALRHLFMAERAASKIPDVPSD---TPRRDIRAVAVIGAGTMGGGIAMNFLNAGLPVKILE 327
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + LE G+ + N +++VKKGK+TQ+K+++ ++LL+ LDY +D D+VIEA+ E+
Sbjct: 328 MKPQALERGLATIGKNYEAQVKKGKLTQDKYQQRMALLSTTLDYADIRDADLVIEAVFED 387
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ +F L+ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+
Sbjct: 388 LGVKESVFRQLDAQMKPGAILASNTSTLDIDKIATFTGRPQDVVGMHFFSPANVMKLLEV 447
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+ V+ ++ I KKI+KT +V G C GF NRM Y++ A L++ G +
Sbjct: 448 VRGKATAKDVLATVMAIAKKIRKTAVVAGVCDGFIGNRMIEQYSRQAGFLLDEGCTPEQV 507
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+AI KFG MGPFR+ DL G + A + E Y S + E R G+ T
Sbjct: 508 DKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVERAEMKY-SRTSDKLCELGRFGQKTA 566
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y +R A V + IE+ R G I P+ K+++++IV+ + F +VNE R
Sbjct: 567 AGWYDYQAGKRDAIASALVHRMIEEHRQQLG--ITPR--KIADEEIVQRLVFALVNEGAR 622
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ +GIA K+ D+D+ + G GFP +R
Sbjct: 623 ILEDGIASKSGDIDMVYITGYGFPMHR 649
>gi|148258278|ref|YP_001242863.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
gi|146410451|gb|ABQ38957.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
Length = 697
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 276/504 (54%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EAH GL++ +V S A +A ++ RP K+
Sbjct: 152 MIVGGDPIGAAEAHKAGLIEEIV--EGPASGAEAFARKVVAENRPLRKLRDDDSKLAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K++ L P D V + GL++E E F KLL S+ K+
Sbjct: 210 ADRSIFTNAVAAITKKSRGLEAPFAAADAVGYAIDLPFDEGLKREREGFLKLLTSDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +K+ GV + G R+V +VAI+G G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREAAKIAGVPE-GTKGRKVDRVAIIGAGTMGGGIAMSFANAGIPVTLIETAE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+ G + E KD D+VIEA+ E +++
Sbjct: 329 EQLKRGMGVMQKNWEATAARGGIPADAPAKRMALIDGKVGLEHVKDADLVIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L++Y P +LASNTS ++++ I T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFGKLDQYAKPGAVLASNTSYLNIDAIAAETSRPQDVLGMHFFSPANVMKLCEIVRA 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P +V + I +KI K P VVG C GF NRM + A L+ G +D
Sbjct: 449 EKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQAEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ +A PDP+V+K I++ + G+ K +S+++I+E + +P++NE ++ A
Sbjct: 562 YKYEAGSRAPLPDPDVEKLIDETLAKLGL----KRRAVSDEEILERMMYPMINEGAKILA 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ + G G+P YR
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYR 641
>gi|408373582|ref|ZP_11171277.1| fatty oxidation complex alpha subunit [Alcanivorax hongdengensis
A-11-3]
gi|407766509|gb|EKF74951.1| fatty oxidation complex alpha subunit [Alcanivorax hongdengensis
A-11-3]
Length = 696
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 185/505 (36%), Positives = 279/505 (55%), Gaps = 12/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ KPVK +A LGLVD VV+ L+ A + +L R P + + D P
Sbjct: 152 MIVGGKPVKAAQARELGLVDDVVS-GDLLDGALAFTRRLLADRAPR-RRIREMDV--PGD 207
Query: 61 EAREIF-KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
E+F +F ++ ARKQ P CI V+A V G+++E E F KLL S
Sbjct: 208 TGAELFSEFEQSIARKQR-GFKAPFSCIKAVQAAVELPFDQGIERERELFFKLLISPESA 266
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ H+FFA+R +KVPG+ D R ++ VA++G G MG GIA + PV L EV
Sbjct: 267 AQRHVFFAEREVAKVPGL-DKTTPKRDIQTVAVIGAGTMGGGIAMNFANAGIPVKLLEVK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L+ G+ +R N Q+ KKG+++ E+ E+ ++L+ L Y+ DVD+VIEA+ EN+
Sbjct: 326 QDALDKGLAIIRRNYQNTAKKGRISAEQVEQRMALIQPTLSYDELGDVDLVIEAVFENMD 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+ +F +L++ C P ILA+NTST+D+N I T ++G HFFSPA+VM LLE VR
Sbjct: 386 VKKAVFTELDRVCKPGAILATNTSTLDVNRIAAFTGRPQDVMGMHFFSPANVMRLLENVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
++T+ VI ++D+ ++I K ++VG C GF NRM A LV G +D+
Sbjct: 446 GDKTADDVIATVMDLSRRIGKVGVLVGVCHGFVGNRMLHKRQAEAVQLVNEGASPQQVDK 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
+ G PMGPF ++DL G V + ++ P+ + E R G+ TR G
Sbjct: 506 VLFDLGFPMGPFAMSDLAGMDVGYRIREELRKDDPDNAPPRNWTDELVEAGRLGQKTRAG 565
Query: 420 FYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+ Y E R P P+V IEK R +G I P+ +S+++I+E + +VNE ++
Sbjct: 566 VFDYQEGDRTPIPSPDVDAIIEKYRRDNG--ITPRH--ISDQEILERCMYVMVNEGAKIL 621
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA + D+D+ + G GFP YR
Sbjct: 622 EEGIAARPLDVDVIWIYGYGFPVYR 646
>gi|167562436|ref|ZP_02355352.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
oklahomensis EO147]
Length = 694
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 274/507 (54%), Gaps = 17/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL D +V + L V+ AR+ H R + +
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDELVEGDLLDAAVAFARKVGAASGPHPRVRNREIVHEN--- 208
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + A + P CID +EAGV+ G GL E + F L+++
Sbjct: 209 ----AAGFIQFARNSVKALAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFIALVQTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L H FF +R SK+P V G R ++ VA++G G MG GIA + + PV L E
Sbjct: 265 SHALRHAFFGERAASKIPDVP-AGTPARVIESVAVIGAGTMGGGIAMNFLNAGLPVTLLE 323
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L+ G+ +R N ++VKKGK+TQEK + ++L+ L Y+ KD D+VIEA+ E
Sbjct: 324 TKQDALDRGLATIRKNYDAQVKKGKLTQEKLDARMALVKPTLAYDDLKDADLVIEAVFEE 383
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+
Sbjct: 384 LGVKEQVFRRLDEVAKPGAILASNTSTLDVNKIAAFTKRPQDVVGMHFFSPANVMKLLEV 443
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR + T+ V+ ++ I KKI+KT +V G C GF NRM Y + A ++E G +
Sbjct: 444 VRGDATAKDVLATVMQIAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQV 503
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI KFG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 504 DRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTG 562
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y RKA P V + + GV + ++ + +IVE + + +VNE +
Sbjct: 563 AGWYDYVPGDRKAQPSKLVDEMVAAYSKERGV----ERRRIGDAEIVERLVYALVNEGAK 618
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E IA KA+D+D+ + G GFP +R
Sbjct: 619 ILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|239815901|ref|YP_002944811.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Variovorax paradoxus
S110]
gi|239802478|gb|ACS19545.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Variovorax paradoxus
S110]
Length = 701
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 258/447 (57%), Gaps = 9/447 (2%)
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
P G+A F+FA+ + N P+ C+D V+A G+ +E F L+ +
Sbjct: 213 PQGDA--YFQFAKNMVGGMSKNYPAPLKCVDAVQAATKMKFDEGMAEERRIFTALMFTPE 270
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L H+F A+R SK+P V + R VK V ++G G MG GI+ + + PV + E
Sbjct: 271 SLALRHLFMAERAASKIPDVPE-DTPKREVKSVGVIGAGTMGGGISMNFLNAGIPVKILE 329
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ ++ L+ GI ++ N +S+VKKGK+ Q+K+E+ ++LL+ LDY KD D++IEA+ E
Sbjct: 330 MKQEALDRGIATIKKNYESQVKKGKLKQDKYEQRMALLSTTLDYNDLKDADLIIEAVFEE 389
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+++F +L++ ILASNTST+D++ I T +VG HFFSPA+VM LLE+
Sbjct: 390 LGVKEKVFKELDRVAKKGAILASNTSTLDVDKIAAFTQRPQDVVGMHFFSPANVMKLLEV 449
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR TS V+ ++DIGKKIKKT +V G C GF NRM Y++ A L++ G +
Sbjct: 450 VRGKATSKDVLATVMDIGKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPQQV 509
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG MGPFR+ DL G + A + P+ Y S + E R G+ T
Sbjct: 510 DKAVEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVEHPDMKY-SRTADKLCELGRFGQKTG 568
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y +R A P V K IE R G I P+ K+S+++IV+ + + +VNE
Sbjct: 569 AGWYDYQAGKRDAIPSELVNKMIEDHRKELG--ITPR--KISDEEIVQRLVYALVNEGAH 624
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ +GIA K+ D+D+ + G GFP +R
Sbjct: 625 ILEDGIASKSGDIDMVYLTGYGFPVWR 651
>gi|374369155|ref|ZP_09627192.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
OR16]
gi|373099305|gb|EHP40389.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
OR16]
Length = 693
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 172/444 (38%), Positives = 254/444 (57%), Gaps = 10/444 (2%)
Query: 62 AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGP-RAGLQKEAEDFQKLLRSETCKS 120
A F+R A N P+ C+D V A + P AGL+ E E F L+ + ++
Sbjct: 209 AEGFIAFSRNTVAAVAKNFPAPLKCVDAVAASLK--PFEAGLKAEREGFMYLITTPESRA 266
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H FF +R SK+P V + G R+++K+A++G G MG GI + + PVI+ E +
Sbjct: 267 LRHAFFGERAASKIPDVPE-GTPTRKLEKIAVIGAGTMGGGITMNFLNAGIPVIMLETKQ 325
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+ +R N ++ KKGK+TQEK E+ + LLT L Y+ KD DMVIEA+ E + +
Sbjct: 326 EALDRGVATIRKNYENSAKKGKLTQEKVEQRMGLLTTTLSYDEIKDADMVIEAVFEEMGV 385
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F L++ ILASNTST+D+N I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 KEIVFKKLDEVMKQGAILASNTSTLDVNKIASFTKRPQDVVGMHFFSPANVMKLLEVVRG 445
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T V+ ++ + KKIKKT +V G C GF NRM Y++ A L++ G +D+A
Sbjct: 446 EKTGKDVLATVMQVAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDKA 505
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ KFG MGPFR+ DL G + A + + PE Y S ++ E R G+ T G+
Sbjct: 506 VEKFGFAMGPFRMGDLAGNDIGWAIRKRRAIDKPEIQY-SKTADLLCELGRYGQKTGAGW 564
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y RKA P+ +V I + G+ K+S+++IVE + F +VNE ++
Sbjct: 565 YDYKAGDRKAYPNQQVNDMIVQHSKDLGIT----RRKISDEEIVERLVFALVNEGAKILE 620
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP +R
Sbjct: 621 EGIASKASDIDMVYLTGYGFPLFR 644
>gi|375105594|ref|ZP_09751855.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
JOSHI_001]
gi|374666325|gb|EHR71110.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
JOSHI_001]
Length = 698
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 294/542 (54%), Gaps = 37/542 (6%)
Query: 1 MMLTSKPVKGE---EAHSLGLVDAVVAPNQLVSTARQWALDILEHRR-PWVATLYKTDKI 56
M+++ +PVK E L+D V+ L++ A +A+D+ + R P V +L K
Sbjct: 152 MIVSGEPVKSELLAAQPGQKLIDKVI-DGDLLAGAIAFAVDVADRRPLPLVRSL-KLSHP 209
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPR--AGLQKEAEDFQKLLR 114
P +FAR + A N P C+D VE + P G++ E F L+
Sbjct: 210 NP----DAYIQFARNTVKAMAKNFPAPAKCVDCVEQ-ALKAPNFEEGMRFELATFMGLML 264
Query: 115 SETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
+ K+L H FF +R SK+P V + R + KVA++G G MG GI+ + + PV
Sbjct: 265 TPESKALRHAFFGERAASKIPDVPE-STPQRAIAKVAVIGAGTMGGGISMNFLNAGIPVT 323
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ E+ + L+ G+ +R N +++VKKGK+ +K+++ ++LLT L Y+ KD D+VIEA+
Sbjct: 324 MLEMKQDALDRGVATIRKNYEAQVKKGKLKDDKYQQRMALLTTTLSYDEIKDADLVIEAV 383
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E + +K+++F L++ P ILASNTST+D++ I T +VG HFFSPA+VM L
Sbjct: 384 FEEIGVKEKVFKALDEVMKPGAILASNTSTLDVDKIASFTQRPQDVVGLHFFSPANVMKL 443
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE+VR +T+ V+ ++ + KKI+KT +V G C GF NRM Y++ A L+E G
Sbjct: 444 LEVVRGAKTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYSRQAGFLLEEGASP 503
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
+D+AI +FG MGPFR+ DL G + A + P Y S ++ E R G+
Sbjct: 504 AQVDKAIERFGFAMGPFRMGDLAGNDIGWAIRKRRYVEQPNLRY-SKTADLLCEMGRYGQ 562
Query: 415 TTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
T G+Y Y +R A P V K +E R G I P+ K+S+ +IV + + +VNE
Sbjct: 563 KTGAGWYDYQPGKRDAIPSEAVNKMVEDHRKALG--ITPR--KISDDEIVHRLVYSLVNE 618
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCYFD-QGRNH 532
++ EGIA KA+D+D+ + G GFP +HRG +CY D QG +
Sbjct: 619 GAKILEEGIASKASDIDMVYLTGYGFP-------LHRG---------GPMCYADTQGLFN 662
Query: 533 VL 534
V+
Sbjct: 663 VV 664
>gi|385209669|ref|ZP_10036537.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
gi|385182007|gb|EIF31283.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
Length = 694
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 279/505 (55%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ GL D + A L A +A + P + KIE
Sbjct: 152 MIVSGTPVMSEKLADSGLFDEL-AQGDLAEAALAFARKVGAKEGPHPKV--RDRKIEHPN 208
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A I +FAR A +L P CID VEAGV +G GL E E F L+++ ++
Sbjct: 209 AAGFI-QFARNSVAAVAKHLPAPHKCIDAVEAGVQNGFDKGLAFERECFVALVQTPESRA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V +D + R + +VA++G G MG GIA I + PV L E
Sbjct: 268 LRHAFFGERAASKIPDVPSDTPV--RDIDQVAVIGAGTMGGGIAMNFINAGIPVTLLETK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+ +R N ++ V+KGK+ E E+ ++L+T L Y+ K+ D+++EA+ E +
Sbjct: 326 QEALDRGLATIRKNYEASVRKGKLKPEALEQRMALITPTLSYDDLKNADLIVEAVFEELG 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRRLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +DR
Sbjct: 446 GKETAKDVLATVMKLAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGVLPAQVDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI KFG MGPFR++DL G + A + + P+ Y S I + E R G+ T G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEHPDMHY-SKIADRLCETGRFGQKTGGG 564
Query: 420 FYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y R A P V I + + + K+S+++IVE + F +VNE ++
Sbjct: 565 WYDYKAGDRTAYPSKVVDDMIVAFSKEA----NAERRKISDEEIVERLVFALVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP YR
Sbjct: 621 EEGIASKASDIDMVYLTGYGFPLYR 645
>gi|146338085|ref|YP_001203133.1| enoyl-CoA hydratase [Bradyrhizobium sp. ORS 278]
gi|146190891|emb|CAL74896.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 278]
Length = 697
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 278/504 (55%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EAH GL++ +V S ++A ++ RP KI
Sbjct: 152 MIVGGDPIGAAEAHKSGLIEEIV--EGPASGGVEFARKVVAENRPLRKLRDDDSKIAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K++ L P D V + GL++E E F KLL S+ K+
Sbjct: 210 ADRSIFTNAVAAITKKSRGLEAPFAAADAVGYAIDLPFDEGLKREREGFLKLLTSDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +K+ GV + G R++++VAI+G G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREAAKIAGVPE-GTKGRKIERVAIIGAGTMGGGIAMSFANAGIPVTLIETAE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+ G + E+ KD D+VIEA+ E +++
Sbjct: 329 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALIDGKVGLENVKDADLVIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L++Y P +LASNTS ++++ I T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFGKLDQYAKPGAVLASNTSYLNIDAIAAETSRPQDVLGMHFFSPANVMKLCEIVRA 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P +V + I +KI K P VVG C GF NRM + A L+ G +D
Sbjct: 449 EKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQAEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ +A PDP+V+K I++ + G+ K +S+++I+E + +P++NE ++ A
Sbjct: 562 YKYEAGSRAPLPDPDVEKLIDETLAKLGL----KRRNVSDEEILERMMYPMINEGAKILA 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ + G G+P YR
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYR 641
>gi|332530996|ref|ZP_08406918.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Hylemonella gracilis
ATCC 19624]
gi|332039557|gb|EGI75961.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Hylemonella gracilis
ATCC 19624]
Length = 701
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/447 (39%), Positives = 255/447 (57%), Gaps = 9/447 (2%)
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
PLG+A F+FAR A N P+ C+D VEA G+ E E F L+ +
Sbjct: 211 PLGDA--YFQFARNTVGAMAKNFPAPLKCVDAVEAATKKKFDDGIAYEREHFINLMWTPE 268
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
C++L H+F A+R SK+ V + R +K VA++G G MG GI + + PV + E
Sbjct: 269 CRALRHVFAAERAASKIADVPE-DTPKREIKSVAVIGAGTMGGGITMNFLNAGIPVKVLE 327
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ L+ G+ +R N +++V KGK+ Q+K+E+ ++LL+ L+Y+ K D+VIEA+ E
Sbjct: 328 TKQEALDRGLATIRKNYEAQVGKGKLKQDKYEQRMALLSTTLNYDDIKYADLVIEAVFEE 387
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ +F L++ P ILASNTST+DLN I T +VG HFFSPA+VM LLE+
Sbjct: 388 MGVKEAVFKKLDEVMKPGAILASNTSTLDLNKIASFTKRPQDVVGLHFFSPANVMKLLEV 447
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR +T V+ ++ + K IKKT +V G GF NRM Y++ A L+E G +
Sbjct: 448 VRGAKTGKDVLATVMALAKTIKKTAVVSGVTDGFIGNRMIEQYSRQAGFLLEEGATPEQV 507
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+AI KFG MGPFR+ DL G + A + P Y S + E R G+ T
Sbjct: 508 DKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRYVEKPGMKY-SKTADKLCELGRFGQKTG 566
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y +R A P V + IE R G I P+ K+SE++IVE + + +VNEA R
Sbjct: 567 AGWYDYKPGKRDAIPSELVNQMIEDHRKALG--ITPR--KISEQEIVERLVYSLVNEAAR 622
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA KA+D+D+ + G GFP +R
Sbjct: 623 ILEEGIASKASDIDMVYLTGYGFPLWR 649
>gi|395005317|ref|ZP_10389201.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
gi|394316700|gb|EJE53410.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
Length = 699
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/448 (38%), Positives = 255/448 (56%), Gaps = 9/448 (2%)
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P G+A F+FAR + A N P C+D VEA G+ E E F L+ +
Sbjct: 210 HPEGDA--YFQFARNMVKGMAKNYPAPAKCVDAVEAATKRKFADGMLFEREIFINLMWTP 267
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H+F A+R SK+P V R +K VA++G G MG GI+ + + PV +
Sbjct: 268 ESRALRHLFMAERAASKIPDVPS-DTPKREIKSVAVIGAGTMGGGISMNFLNAGIPVKIL 326
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E ++ L+ G+ ++ N +++VKKGK+ ++K+ + ++LLT LDY KD D+VIEA+ E
Sbjct: 327 EAKQEALDRGVATIKKNYEAQVKKGKLKEDKYAQRMALLTTTLDYADLKDADLVIEAVFE 386
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+ +F L+ P ILASNTST+D++ I T + +VG HFFSPA+VM LLE
Sbjct: 387 ELGVKEAVFKQLDAVMKPGAILASNTSTLDVDKIAAFTKRPEDVVGMHFFSPANVMKLLE 446
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR +TS V+ ++ IGKKIKKT +V G C GF NRM Y++ A L++ G
Sbjct: 447 VVRGAKTSKDVLATVMAIGKKIKKTSVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPQQ 506
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+DRA+ KFG MGPFR+ DL G + A + + Y S + E R G+ T
Sbjct: 507 VDRAVEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVERADMKY-SRTADKLCELGRFGQKT 565
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y +R A P V K IE R G I P+ K+S+++IVE + F +VNE
Sbjct: 566 GAGWYDYQAGKRDAIPSDLVNKMIEDHRKELG--ITPR--KISDEEIVERLVFALVNEGA 621
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ +GIA K+ D+D+ + G GFP YR
Sbjct: 622 HILEDGIASKSGDIDMVYLTGYGFPIYR 649
>gi|334343757|ref|YP_004552309.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334100379|gb|AEG47803.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 680
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/503 (34%), Positives = 272/503 (54%), Gaps = 23/503 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV + LGLVD + A +QL + A +A + RR T ++
Sbjct: 149 MIVSGSPVPAAKGAELGLVDKLAAQDQLAAEAIAFARTVDGPRR--------TGDLDASA 200
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +FA RK L P CI+ V+A G KE F +L+ + K+
Sbjct: 201 TADVFERFAENNKRKIGA-LDAPKACIEAVKAATELPLDQGQLKERALFTQLMNGDQSKA 259
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+FFA+R +KV G+ +A R + KV ++G G MG GI+ + + PV + E+ +
Sbjct: 260 LRHVFFAERAAAKVDGLPK-DVARRPIAKVGVIGAGTMGGGISMNFLSAGIPVTIVEMTQ 318
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G G +R N ++ KG++T + EK + LL+ LD+++ K+ D++IEA+ EN+ +
Sbjct: 319 EALDKGTGLIRKNYEATAAKGRLTMAQVEKAMGLLSPTLDFDALKECDLIIEAVYENMDV 378
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K++IF L+ P +LASNTS + ++ I T ++G HFFSPA+VM L+E+VR
Sbjct: 379 KKEIFTRLDGIAKPGALLASNTSYLSIDEIASATGRPQDVLGLHFFSPANVMKLVEVVRG 438
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P V+ +DIG++I K P+V G C GF NRM P A ++ G +DR
Sbjct: 439 AKTAPDVLATGMDIGRRIGKVPVVSGVCYGFIGNRMLAPRLNGAIAMLVEGATAEQVDRV 498
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+FGMPMGP ++ DL G + IE+ + + R G+ T GF
Sbjct: 499 SVEFGMPMGPLQMIDLAGVDIGWHRDPNRIESVRD---------ALNAAGRWGQKTGAGF 549
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y YDERR+ +P P + I+ R+ GVA P+ +SE +IV + +VNEA + E
Sbjct: 550 YDYDERRRPAPSPAAQAIIDDFRAREGVA--PR--AISEDEIVTRTLYVMVNEAAHILEE 605
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIA +A+D+DI G G+P ++
Sbjct: 606 GIAQRASDIDIVWNYGYGWPRHK 628
>gi|194289576|ref|YP_002005483.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase (n-terminal); 3-hydroxyacyl-CoA
dehydrogenase (c-terminal), partial [Cupriavidus
taiwanensis LMG 19424]
gi|193223411|emb|CAQ69416.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA
dehydrogenase (C-terminal) [Cupriavidus taiwanensis LMG
19424]
Length = 693
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 256/443 (57%), Gaps = 8/443 (1%)
Query: 62 AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSL 121
A FAR A N P+ C++ V AG + GL++E E F L+ + ++L
Sbjct: 209 AEGYLGFARNTVAAMAKNFPAPLKCLEAV-AGSLKPFEQGLKQEREGFLFLVTTPESRAL 267
Query: 122 VHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEK 181
H FF +R SK+P V + G R+++KVA++G G MG GI+ + + PV + E ++
Sbjct: 268 RHAFFGERAASKIPDVPE-GTPVRKIEKVAVIGAGTMGGGISMNFLNAGIPVTILETKQE 326
Query: 182 FLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLK 241
L+ G+G +R N ++ KKGK+TQEK E+ + LL+ L Y+ KD DMVIEA+ E + +K
Sbjct: 327 ALDRGVGVIRKNYENSAKKGKLTQEKVEQRMGLLSTTLSYDDIKDADMVIEAVFEEMGVK 386
Query: 242 QQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTN 301
+ +F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+VR +
Sbjct: 387 EIVFKKLDEVMKPGAILASNTSTLDVNKIASFTKRPQDVVGMHFFSPANVMKLLEVVRGD 446
Query: 302 QTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAI 361
+T V+ ++ + KKIKKT +V G C GF NRM Y++ A L++ G +D+AI
Sbjct: 447 KTGKDVLATVMQVAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAI 506
Query: 362 TKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFY 421
KFG MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+Y
Sbjct: 507 EKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIQY-SKTADLLCEMGRFGQKTGAGWY 565
Query: 422 LYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y RK P+ +V I + G+ K+S+++IVE + F +VNE ++ E
Sbjct: 566 DYKAGDRKPYPNQQVNDMIVQHSKDLGLT----RRKISDEEIVERLVFALVNEGAKILEE 621
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIA KA+D+D+ + G GFP +R
Sbjct: 622 GIASKASDIDMVYLTGYGFPLFR 644
>gi|221236228|ref|YP_002518665.1| multifunctional enoyl-CoA
hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase
[Caulobacter crescentus NA1000]
gi|220965401|gb|ACL96757.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase
[Caulobacter crescentus NA1000]
Length = 696
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/502 (34%), Positives = 274/502 (54%), Gaps = 14/502 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ T + V + AH++GL D +V +L A +A ++ RP +K+E
Sbjct: 159 MVTTGQHVPAKAAHAMGLFDELVEEGKLREGAIAFAKAVVAENRPLKKVRDLNEKVEAAR 218
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EIF+ R K+ P I +EA V GL+ E + F +L+ +
Sbjct: 219 GKPEIFEAFRKANAKKFRGFMAPENNIKCIEAAVNLPFDEGLKAERKLFMELMTGSQSAA 278
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
++FFA+R +K+P V D VKKV ++G G MG GIA + + PV + E +
Sbjct: 279 QRYVFFAERQAAKIPDVPD-DTPTIPVKKVGVIGAGTMGGGIAMNFLNAGIPVTIIEAKQ 337
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ LE G+G +R N ++ KKG++TQ+ EK ++LLT ++ E+ D DM+IEA+ E + +
Sbjct: 338 ENLERGVGIIRKNYENTAKKGRLTQDDVEKRMALLTPSMEMEALADCDMIIEAVFELMEI 397
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L+K P ILA+NTS +D++ I T + ++G HFFSPA+VM LLE+VR
Sbjct: 398 KKEVFTKLDKIAKPGAILATNTSYLDVDAIAAVTSRPESVIGTHFFSPANVMRLLELVRG 457
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TS VI + + K I K P++VG C GF NRM + A L+ G + +DR
Sbjct: 458 DKTSKDVIATCMKLSKTIGKVPVLVGVCYGFVGNRMLAQRQREAQKLILEGAMPWDVDRV 517
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG+PMGPF ++DL G + P +T S + ++ E R G+ KGF
Sbjct: 518 LYDFGLPMGPFAMSDLAGLDIGWD---------PAKTSSSTVREVLCEMDRRGQKNGKGF 568
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y YDE R A P P V++ I + + ++++++I+E +P+VNE ++ E
Sbjct: 569 YDYDENRNAKPSPVVEEVIRDFAEKRQI----QRREITDQEILERCLYPMVNEGAKILEE 624
Query: 481 GIAVKAADLDIASVMGMGFPPY 502
G A++A+D+DI + G G+P Y
Sbjct: 625 GKAIRASDIDIVWINGYGWPVY 646
>gi|16127419|ref|NP_421983.1| fatty oxidation complex subunit alpha [Caulobacter crescentus CB15]
gi|13424863|gb|AAK25151.1| fatty oxidation complex, alpha subunit [Caulobacter crescentus
CB15]
Length = 692
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/502 (34%), Positives = 274/502 (54%), Gaps = 14/502 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ T + V + AH++GL D +V +L A +A ++ RP +K+E
Sbjct: 155 MVTTGQHVPAKAAHAMGLFDELVEEGKLREGAIAFAKAVVAENRPLKKVRDLNEKVEAAR 214
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EIF+ R K+ P I +EA V GL+ E + F +L+ +
Sbjct: 215 GKPEIFEAFRKANAKKFRGFMAPENNIKCIEAAVNLPFDEGLKAERKLFMELMTGSQSAA 274
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
++FFA+R +K+P V D VKKV ++G G MG GIA + + PV + E +
Sbjct: 275 QRYVFFAERQAAKIPDVPD-DTPTIPVKKVGVIGAGTMGGGIAMNFLNAGIPVTIIEAKQ 333
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ LE G+G +R N ++ KKG++TQ+ EK ++LLT ++ E+ D DM+IEA+ E + +
Sbjct: 334 ENLERGVGIIRKNYENTAKKGRLTQDDVEKRMALLTPSMEMEALADCDMIIEAVFELMEI 393
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L+K P ILA+NTS +D++ I T + ++G HFFSPA+VM LLE+VR
Sbjct: 394 KKEVFTKLDKIAKPGAILATNTSYLDVDAIAAVTSRPESVIGTHFFSPANVMRLLELVRG 453
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TS VI + + K I K P++VG C GF NRM + A L+ G + +DR
Sbjct: 454 DKTSKDVIATCMKLSKTIGKVPVLVGVCYGFVGNRMLAQRQREAQKLILEGAMPWDVDRV 513
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG+PMGPF ++DL G + P +T S + ++ E R G+ KGF
Sbjct: 514 LYDFGLPMGPFAMSDLAGLDIGWD---------PAKTSSSTVREVLCEMDRRGQKNGKGF 564
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y YDE R A P P V++ I + + ++++++I+E +P+VNE ++ E
Sbjct: 565 YDYDENRNAKPSPVVEEVIRDFAEKRQI----QRREITDQEILERCLYPMVNEGAKILEE 620
Query: 481 GIAVKAADLDIASVMGMGFPPY 502
G A++A+D+DI + G G+P Y
Sbjct: 621 GKAIRASDIDIVWINGYGWPVY 642
>gi|160898754|ref|YP_001564336.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Delftia acidovorans
SPH-1]
gi|160364338|gb|ABX35951.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Delftia acidovorans
SPH-1]
Length = 703
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/513 (35%), Positives = 284/513 (55%), Gaps = 21/513 (4%)
Query: 1 MMLTSKPVKGEEAHSL---GLVDAVVA-PNQLVSTARQWALDILEHRR-----PWVATLY 51
M+++ +PVK E S+ L D + A P L+ A+ +AL++ + P V L
Sbjct: 152 MIVSGEPVKSELLASIPGQKLFDKMAASPESLLDEAKAFALEVADKHAAGGPLPRVRDLP 211
Query: 52 KTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQK 111
P G+A F+FAR + A N P C+D VE G+ E + F +
Sbjct: 212 CK---HPQGDA--YFQFARNMVKGMAKNYPAPARCVDTVENAARKKFDEGMALERDAFMQ 266
Query: 112 LLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNY 171
L+ S ++L H+F A+R SK+ V A R +K V ++G G MG GI+ + +
Sbjct: 267 LMWSPESRALRHLFMAERAASKIADVPS-DTAVRDIKTVGVIGAGTMGGGISMNFLNAGI 325
Query: 172 PVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVI 231
PV + E ++ L+ G+ +R N +++VKKGK+TQEK+++ ++LL+ L Y++ K+ D++I
Sbjct: 326 PVTILETKQEALDRGVATIRKNYEAQVKKGKLTQEKYDQRMALLSTTLSYDALKNADLII 385
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHV 291
EA+ E + +K+ +F L++ P ILASNTST+D++ I T +VG HFFSPA+V
Sbjct: 386 EAVFEELGVKETVFKQLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANV 445
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
M LLE+VR T+ V+ ++ + KKIKKT +V G C GF NRM Y++ A L++ G
Sbjct: 446 MKLLEVVRGKHTAKDVLATVMKLAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEG 505
Query: 352 TDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKR 411
+D+AI KFG MGPFR+ DL G + A + + Y S + E R
Sbjct: 506 ATPAQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVERADMKY-SRTADKLCELGR 564
Query: 412 AGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
G+ T G+Y Y +R A P V + IE R G I P+ K+S+++IV+ + F +
Sbjct: 565 FGQKTGAGWYDYQAGKRDAIPSELVNQMIESHRKELG--ITPR--KISDEEIVQRLVFAL 620
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
VNE + +GIA K+ D+D+ + G GFP +R
Sbjct: 621 VNEGAHILEDGIAGKSGDIDMVYLTGYGFPIWR 653
>gi|410612368|ref|ZP_11323447.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
gi|410168108|dbj|GAC37336.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
Length = 714
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 187/509 (36%), Positives = 289/509 (56%), Gaps = 19/509 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVV-APNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
M+++ +PV ++ G+ D VV +P L+++A + ++ T KI+
Sbjct: 166 MIVSGRPVAADKLP--GVFDVVVDSPETLLTSALAFCEKVIADGSKVRKTC--DVKIDVS 221
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+E+F R +A P CI VEA V GL +E E F + +RS+ +
Sbjct: 222 SAPKELFAQYRQGLATKARGFFAPERCIQAVEASVELPFAQGLIREGELFMECMRSKEAR 281
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ H FFA+R S V D R +K+V I+G G MG GIA + PVI+ E+
Sbjct: 282 AQQHFFFAERAASHVKDF-DKETPVRDIKQVGIIGAGTMGGGIAMNFANAGIPVIMLELK 340
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L+ G+ +R N ++ KKGK+T ++ E + LLTG +Y + +VD+VIEA+ E +S
Sbjct: 341 QDALDKGLALIRKNYENSAKKGKLTAQQVEDRMGLLTGSTEYAALCNVDLVIEAVFEKMS 400
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+KQ++F L+ C P ILASNTST+D++ IGE T + ++G HFFSPA+VM LLE+V+
Sbjct: 401 VKQEVFKALDAVCKPGAILASNTSTLDIDEIGEATKRPEDVIGLHFFSPANVMKLLEVVK 460
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYT-QAAFLLVERGTDLYLID 358
T++TSP+VI + + KKI K ++VG C GF NRM Y +A +++E GT + ID
Sbjct: 461 TSKTSPEVIKTTMKMAKKINKVAVLVGVCFGFVGNRMIEGYGREANRMMLEGGTPEH-ID 519
Query: 359 RAITKFGMPMGPFRLADLVGFGVAI---ATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+ I FG+PMGPF + D+ G + + +FI++ P +Y ++ + E R G
Sbjct: 520 KVIYDFGLPMGPFTMGDMAGQDIGAFVRESRREFIKHDP--SY-CILADKLVEQGRVGLK 576
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KG YLY+ RK PDP V + ++ + GVA +S+++I+E I FP++NE
Sbjct: 577 VGKGVYLYEAGSRKPIPDPSVLELAKQVAADLGVAQ----RDISDQEIIERIIFPMINEG 632
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA K++D+D+ V G GFP YR
Sbjct: 633 ALILEEGIAAKSSDIDVIYVYGYGFPVYR 661
>gi|332525955|ref|ZP_08402096.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rubrivivax
benzoatilyticus JA2]
gi|332109506|gb|EGJ10429.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rubrivivax
benzoatilyticus JA2]
Length = 702
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 255/440 (57%), Gaps = 9/440 (2%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
F+FAR + A + P C+D VEA V AGL E E F L+ + ++L H F
Sbjct: 219 FQFARNTVKAMARHFPAPAKCVDAVEAAVKRDIDAGLAYERELFMALMFTPESQALRHAF 278
Query: 126 FAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLE 184
FA+R SK+P V D L RR+ KV ++G G MG GI+ + + PV + E + LE
Sbjct: 279 FAERAASKIPDVPEDTPL--RRITKVGVVGAGTMGGGISMNFLNAGLPVTILETTAEALE 336
Query: 185 AGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQI 244
G+ +R N +++VKKGK+ ++K+++ ++LLT L Y D+VIEA+ E++ +KQQ+
Sbjct: 337 RGVATIRRNYEAQVKKGKLKEDKYQQRMALLTTTLSYADLAGCDLVIEAVYEDLGVKQQV 396
Query: 245 FADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTS 304
F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+VR +T+
Sbjct: 397 FGALDEVVKPGAILASNTSTLDVNRIAGFTKRPADVVGMHFFSPANVMKLLEVVRGEKTA 456
Query: 305 PQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKF 364
V+ ++ + K I+KT +V G C GF NRM Y++ A L+E G +D+A+ F
Sbjct: 457 KDVLATVMQLAKTIRKTAVVSGVCDGFIGNRMIEQYSRQAGFLLEEGCTPQQVDKAVEAF 516
Query: 365 GMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYD 424
G MGPFR+ DL G + A + P+ Y S ++ E R G+ T G+Y Y
Sbjct: 517 GFAMGPFRMGDLAGNDIGWAIRKRRYVEQPQMRY-SQTADLLCEMGRYGQKTGAGWYDYA 575
Query: 425 E-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIA 483
+R A P P V++ + K R +G+ I + +S+ +IV + + +VNE ++ +GIA
Sbjct: 576 PGKRDAIPSPVVEEMVAKHR--AGLGITAR--TISDDEIVHRLVYALVNEGAKILEDGIA 631
Query: 484 VKAADLDIASVMGMGFPPYR 503
KA+D+D+ + G GFP +R
Sbjct: 632 SKASDIDMVYLTGYGFPLWR 651
>gi|109898233|ref|YP_661488.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
gi|109700514|gb|ABG40434.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
Length = 702
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 185/511 (36%), Positives = 284/511 (55%), Gaps = 23/511 (4%)
Query: 1 MMLTSKPVKGEEAHSL-GLVDAVVA-PNQLVSTARQWALDILEHRRPWVATLYKTDK--I 56
M+++ +P E+A L G+ D +V P L+S A + ++ A + KT I
Sbjct: 152 MIVSGRP---EKASKLAGVFDLIVEDPTNLLSEAMAFVQKVVAEG----AKVRKTSDVAI 204
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
+ E+F R +KQA P CI VEA V GL +E+E F + + S+
Sbjct: 205 DKASAPDELFAQYRQGLKKQARGFFAPERCIQAVEASVSLPFEQGLVRESELFMECMGSK 264
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++ H FFA+R + V D R +KKV I+G G MG GIA + PVI+
Sbjct: 265 EARAQQHFFFAERAAAHVSDY-DKSTPTRDIKKVGIIGAGTMGGGIAMNFANAGIPVIML 323
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E+ ++ L+ G+ +R N ++ KKGK+TQ+ E ++LL G +YE+ DVD+VIEA+ E
Sbjct: 324 ELKQEALDKGLALIRKNYENSAKKGKLTQQAVEDRMALLQGSTEYEALSDVDLVIEAVFE 383
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+S+K+++F L+K C ILASNTST+D+N I T + ++G HFFSPA+VM LLE
Sbjct: 384 KMSVKKEVFGALDKVCKKGAILASNTSTLDVNEIAASTSRPEDVIGLHFFSPANVMKLLE 443
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+V+ +TS VI + + KKI K ++VG C GF NRM PY + A L+ G
Sbjct: 444 VVKAEKTSADVIKTCMQMAKKINKVAVLVGVCFGFVGNRMIEPYGREAARLMLEGATPQQ 503
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAI---ATGMQFIENFPERTYKSMIIPIMQEDKRAG 413
ID+ I FG+PMGPF + D+ G + + +FI + P +Y ++ + + R G
Sbjct: 504 IDKVIYDFGLPMGPFTMGDMAGLDIGFYVRESRREFIAHDP--SY-CVVSDRLVKQGRVG 560
Query: 414 ETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
+ +G Y+Y+ R PDPEV + ++ + G+A +S+++I+E I FP++N
Sbjct: 561 LKSGRGAYMYEPGNRMPIPDPEVVEMAKEEAARLGIAQR----DISDQEILERIIFPLIN 616
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E + EGIA K++D+D+ V G GFP YR
Sbjct: 617 EGALILEEGIAAKSSDIDVIYVYGYGFPVYR 647
>gi|421616221|ref|ZP_16057236.1| enoyl-CoA hydratase [Pseudomonas stutzeri KOS6]
gi|409781796|gb|EKN61371.1| enoyl-CoA hydratase [Pseudomonas stutzeri KOS6]
Length = 701
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 180/506 (35%), Positives = 274/506 (54%), Gaps = 12/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ +P+ EA ++D + +L + +A +L+ R + +T +E
Sbjct: 152 MIVSGQPISAAEALEHTIIDELFE-GELAAAGIGFARRLLDDGRGPRRSGEQTRGLEG-A 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ + + A+ K+ P L P+ C+ VEA V GL++E E F + L S +
Sbjct: 210 DNEALIRAKHAEVAKRMPGLFSPLRCVAAVEAAVKLPLAEGLKRERELFVECLNSPQRGA 269
Query: 121 LVHIFFAQRGTSKVPGVTDL--GLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
LVH FFA+R SK+ DL + PR + A++GGG MG GIA + + PV L E+
Sbjct: 270 LVHSFFAERQASKI---NDLPADVKPRAINSAAVIGGGTMGVGIALSFANAGLPVKLLEI 326
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
NE L G+ R R + VK+G +T+E EK +SL+TGV DY + D D+V+EA+ E++
Sbjct: 327 NEDALLRGLQRARDTYAASVKRGSLTEEAMEKRLSLVTGVTDYGALADADVVVEAVFEDM 386
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+Q+F L+ C P ILASNTS++DLN I T +VG HFFSPA+VM LLE+V
Sbjct: 387 DVKRQVFEQLDAVCKPGAILASNTSSLDLNAIATFTKRPQDVVGLHFFSPANVMRLLEVV 446
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +TS V+ + IGK++KK +VVG C GF NRM F Y + A L+E G +D
Sbjct: 447 RGEKTSDDVLATAMAIGKQLKKVSVVVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVD 506
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ FGM MGPF + DL G + A + P + + E G+ T
Sbjct: 507 AALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDKLCEAGMLGQKTGA 566
Query: 419 GFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y+ R +P + +E A G+ + +L E+ I+E F +VNE ++
Sbjct: 567 GYYRYEPGNRMPLENPALAPMLEAASREKGI----ERRELEEQYIIERTIFALVNEGAKI 622
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA +++D+D+ + G GFP +R
Sbjct: 623 LEEGIAQRSSDIDVIYLNGYGFPAFR 648
>gi|91978018|ref|YP_570677.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas
palustris BisB5]
gi|91684474|gb|ABE40776.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodopseudomonas palustris BisB5]
Length = 699
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 275/504 (54%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ +A GL++ VV V+ +A +L +RP K+
Sbjct: 152 MIVGGNPIGAADALKHGLIEEVV--EDRVAGGVAFARKVLAEKRPTRRLRDDDSKLAAAR 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K+A L P C D + A + GL KE E F KL+ S+ K+
Sbjct: 210 ADRSIFTNAVASMTKKARGLEAPFACADAIGAAIDLPFEQGLAKEREGFLKLVVSDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +KV GV D G PR V +VAI+G G MG GIA + + PV L E +
Sbjct: 270 QRYAFFAEREAAKVDGVPD-GAKPRPVARVAIIGAGTMGGGIAMSFANAGIPVTLIETGK 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K + L+TGV+ E+ KD D++IEA+ E +++
Sbjct: 329 EQLDRGMGIMQKNYEATAARGGIPADAPAKRMGLITGVVGLENVKDADLIIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L+ Y P +LASNTS ++++ I T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFTALDAYAKPGAVLASNTSYLNVDEIAATTKRPQDVLGMHFFSPANVMKLCEIVRG 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P ++ + I KKI K P+V G C GF NRM ++ + L+ G +D
Sbjct: 449 AKTAPDALLTAVSIAKKIAKVPVVAGVCDGFIGNRMLAARSKQSEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRQDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y++ R PDPEV+ I + G+ K ++S+++I+E + +P++NE R+
Sbjct: 562 YKYEQGSRSPLPDPEVETLINDTLTKLGL----KRREVSDEEILERMVYPMINEGARILE 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA + +D+D+ + G G+P YR
Sbjct: 618 EKIAARPSDIDVVWLYGYGWPIYR 641
>gi|254252171|ref|ZP_04945489.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
gi|124894780|gb|EAY68660.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
Length = 694
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 180/505 (35%), Positives = 273/505 (54%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ GL D + A L+ A +A + RP + KI
Sbjct: 152 MIVSGTPVPSEQLADSGLFDDI-AGGDLLDAALAFARKV--GARPGPHPRVRDRKIV-HD 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +FAR + APN P CID +EAGV+ G G E E F L+ + ++
Sbjct: 208 NAAGFIQFARNSVKAAAPNFPAPHRCIDAIEAGVLHGFDKGSAAEREGFVALMMTPESRA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ H FFA+R SK+P V D + R +++V ++G G MG GIA + + PV L E
Sbjct: 268 MRHAFFAERAASKIPDVPADTPV--REIRRVGVIGAGTMGGGIAMNFVNAGLPVTLLETT 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ LE G+ +R N ++V KGK+T ++ + I+L+ L Y+ KD D+++EA+ E +
Sbjct: 326 QEALERGLATIRKNYDAQVAKGKLTHDQRDARIALIAPTLSYDDLKDADLIVEAVFEELD 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+++F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKERVFRRLDEVAKPGAILASNTSTLDVNRIASFTKRPHDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT+ + ++ + KKI+KT +V G C GF NRM Y + A ++E G IDR
Sbjct: 446 GAQTAKDALATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQIDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI FG MGPFR++DL G + A + P+ Y S I + E R G+ T G
Sbjct: 506 AIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLHY-SKIADRLCEQGRFGQKTGAG 564
Query: 420 FYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y R+A P V + + + G+A + + +IVE + + +VNE ++
Sbjct: 565 WYDYAPGERRARPSALVDEMVRAYSNERGIA----RRTIGDDEIVERLVYALVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
E IA KA+D+D+ + G GFP +R
Sbjct: 621 EERIASKASDIDMVYLTGYGFPIWR 645
>gi|167836289|ref|ZP_02463172.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis MSMB43]
Length = 694
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 183/512 (35%), Positives = 273/512 (53%), Gaps = 27/512 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ GL DA+V D+L+ + P
Sbjct: 152 MIVSGAPVPSEQLAQSGLFDALVEG------------DLLDAAVAFARKAAAASGPHPRV 199
Query: 61 EAREI--------FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKL 112
REI +FAR A+ A + P CID +EAGV+ G GL E + F L
Sbjct: 200 RDREIVHENAAGFIQFARNSAKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVAL 259
Query: 113 LRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
+++ ++L H FF +R SK+P V R +K VA++G G MG GI + + P
Sbjct: 260 VQTPESRALRHAFFGERAASKIPDVP-ADTPAREIKAVAVIGAGTMGGGITMNFLNAGLP 318
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
V L E ++ L+ G+ +R N ++VKKGK+TQEK + ++L+ L Y+ KD D+VIE
Sbjct: 319 VTLLETKQEALDRGVATIRRNYDAQVKKGKLTQEKLDARMALIRPTLAYDDLKDADLVIE 378
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A+ E + +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM
Sbjct: 379 AVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKIAAFTKRPQDVVGMHFFSPANVM 438
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
LLE+VR +T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G
Sbjct: 439 KLLEVVRGERTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGA 498
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRA 412
+DRAI KFG MGPFR++DL G + A + P+ Y S I + E R
Sbjct: 499 LPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRF 557
Query: 413 GETTRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ T G+Y Y R A P V + I + G+ + ++ + +IVE + + +V
Sbjct: 558 GQKTGAGWYDYVPGERHAKPSKLVDEMIVAYSNERGL----ERREIGDDEIVERLVYALV 613
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE ++ E IA KA+D+D+ + G GFP +R
Sbjct: 614 NEGAKILEEKIASKASDIDMVYLAGYGFPLWR 645
>gi|254429789|ref|ZP_05043496.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Alcanivorax sp. DG881]
gi|196195958|gb|EDX90917.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Alcanivorax sp. DG881]
Length = 695
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 184/509 (36%), Positives = 281/509 (55%), Gaps = 21/509 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYK-TDKIEPL 59
M++ PVK +EA SLGLVD +V+ L+ A + +L P L K D P
Sbjct: 152 MVVGGNPVKAKEALSLGLVDEMVS-GDLLDGALAYTRQLLADNAP----LRKLRDLAVPD 206
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+ +F ++ ARKQ P CI V+A V G+++E E F +LL S
Sbjct: 207 AQDGLFDQFEQSIARKQR-GFKAPFSCIKAVKAAVELPFDKGVERERELFFELLVSPESA 265
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ H+FFA+R +KVPG+ D R + +VA++G G MG GIA + PV L EV
Sbjct: 266 AQRHVFFAEREVAKVPGL-DKNTPKREINQVAVIGAGTMGGGIAMNFANAGIPVRLLEVK 324
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
E LE G+ +R N ++ KKG++T E+ E+ ++L+ L Y+ DVD+VIEA+ EN+
Sbjct: 325 EDALERGVAVIRKNYENTAKKGRITDEQVEQRMALIQPTLSYDDLSDVDLVIEAVFENMD 384
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+ +F++L++ C P ILA+NTST+D++ I T + ++G HFFSPA+VM LLE VR
Sbjct: 385 VKEAVFSELDRVCKPGAILATNTSTLDVDRIASFTQRPEDVMGMHFFSPANVMKLLENVR 444
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+TS +V+ ++D+ ++I K ++VG C GF NRM A LV G +D+
Sbjct: 445 GEKTSDEVVATVMDLSRRIGKVGVLVGVCHGFVGNRMLHRRQAEAVQLVNEGASPQQVDK 504
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIE----NFPERTYKSMIIPIMQEDKRAGET 415
+ G PMGPF ++DL G V + + N P R + ++ E R G+
Sbjct: 505 VLFDLGFPMGPFAMSDLAGMDVGYRIREELRKEDPANGPARNWTDELV----EAGRLGQK 560
Query: 416 TRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T+ G + Y D R P V IE+ RS +G I P+ ++S+++I+E + +VNE
Sbjct: 561 TQAGVFDYKDGDRTPVPSTAVDGIIEQYRSNNG--ITPR--EISDQEILERCMYVMVNEG 616
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ EGIA + D+D+ + G GFP YR
Sbjct: 617 AKILEEGIAARPLDVDVIWIYGYGFPVYR 645
>gi|424903808|ref|ZP_18327321.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis MSMB43]
gi|390931681|gb|EIP89082.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis MSMB43]
Length = 692
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 183/512 (35%), Positives = 273/512 (53%), Gaps = 27/512 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ GL DA+V D+L+ + P
Sbjct: 150 MIVSGAPVPSEQLAQSGLFDALVEG------------DLLDAAVAFARKAAAASGPHPRV 197
Query: 61 EAREI--------FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKL 112
REI +FAR A+ A + P CID +EAGV+ G GL E + F L
Sbjct: 198 RDREIVHENAAGFIQFARNSAKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVAL 257
Query: 113 LRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
+++ ++L H FF +R SK+P V R +K VA++G G MG GI + + P
Sbjct: 258 VQTPESRALRHAFFGERAASKIPDVP-ADTPAREIKAVAVIGAGTMGGGITMNFLNAGLP 316
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
V L E ++ L+ G+ +R N ++VKKGK+TQEK + ++L+ L Y+ KD D+VIE
Sbjct: 317 VTLLETKQEALDRGVATIRRNYDAQVKKGKLTQEKLDARMALIRPTLAYDDLKDADLVIE 376
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A+ E + +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM
Sbjct: 377 AVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKIAAFTKRPQDVVGMHFFSPANVM 436
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
LLE+VR +T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G
Sbjct: 437 KLLEVVRGERTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGA 496
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRA 412
+DRAI KFG MGPFR++DL G + A + P+ Y S I + E R
Sbjct: 497 LPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRF 555
Query: 413 GETTRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ T G+Y Y R A P V + I + G+ + ++ + +IVE + + +V
Sbjct: 556 GQKTGAGWYDYVPGERHAKPSKLVDEMIVAYSNERGL----ERREIGDDEIVERLVYALV 611
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE ++ E IA KA+D+D+ + G GFP +R
Sbjct: 612 NEGAKILEEKIASKASDIDMVYLAGYGFPLWR 643
>gi|339325689|ref|YP_004685382.1| enoyl-CoA hydratase FadB [Cupriavidus necator N-1]
gi|338165846|gb|AEI76901.1| enoyl-CoA hydratase FadB [Cupriavidus necator N-1]
Length = 693
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 168/437 (38%), Positives = 253/437 (57%), Gaps = 8/437 (1%)
Query: 68 FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFA 127
FAR A N P+ C++ V AG + GL++E E F L+ + ++L H FF
Sbjct: 215 FARNTVAAMAKNFPAPLKCLEAV-AGSLKPFEQGLKEEREGFLFLVTTPESRALRHAFFG 273
Query: 128 QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGI 187
+R SK+P V + G R+++KVA++G G MG GI+ + + PV + E ++ L+ G+
Sbjct: 274 ERAASKIPDVPE-GTPTRKIEKVAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGV 332
Query: 188 GRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFAD 247
+R N ++ KKGK+TQEK E+ + LL+ L Y+ KD D++IEA+ E + +K+ +F
Sbjct: 333 ATIRKNYENSAKKGKLTQEKVEQRMGLLSTTLSYDDLKDADLIIEAVFEEMGVKETVFKK 392
Query: 248 LEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQV 307
L++ ILASNTST+D+N I T +VG HFFSPA+VM LLE+VR +T V
Sbjct: 393 LDEVAKQGAILASNTSTLDVNKIASFTKRPQDVVGMHFFSPANVMKLLEVVRGEKTGKDV 452
Query: 308 IVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMP 367
+ ++ IGKKIKKT +V G C GF NRM Y++ A L++ G +D+AI KFG
Sbjct: 453 LATVMQIGKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFA 512
Query: 368 MGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-R 426
MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+Y Y
Sbjct: 513 MGPFRMGDLAGNDIGWAIRKRRAVDKPDIQY-SKTADLLCEMGRFGQKTGAGWYDYKAGD 571
Query: 427 RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKA 486
RK P+ +V I + G+ K+S+++IVE + F +VNE ++ EGIA KA
Sbjct: 572 RKPYPNQQVNDMIVQHSKDLGIT----RRKISDEEIVERLVFALVNEGAKILEEGIASKA 627
Query: 487 ADLDIASVMGMGFPPYR 503
+D+D+ + G GFP +R
Sbjct: 628 SDIDMVYLTGYGFPLFR 644
>gi|339492228|ref|YP_004712521.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338799600|gb|AEJ03432.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 701
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 174/504 (34%), Positives = 272/504 (53%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ +P+ EA +VD + L+ +A ++E R + +T +E +
Sbjct: 152 MIVSGQPIGAAEALEHHIVDELFE-GDLIEAGLTYARRLVEEGRGPRRSGEQTRGLEGV- 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ + + A+ K+ P L P+ CI VEA GL++E E F + L S +
Sbjct: 210 DNEALIRAKHAEVAKRMPGLFSPLRCIAAVEAATRLPLAEGLKRERELFTECLNSPQRGA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FFA+R K+ + + PR ++ A++GGG MG GIA + + PV L E+N+
Sbjct: 270 LIHSFFAERQAGKIDDLPS-DVKPRPIRTAAVIGGGTMGVGIALSFANAGVPVKLLEIND 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ R R + VK+G +T++ E+ ++L+TGV DY + D D+V+EA+ E + +
Sbjct: 329 DALQRGLQRARETYAASVKRGSLTEDAMEQRLALITGVTDYGALADADVVVEAVFEEMGV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQ+F L+ C P ILASNTS++DLN I T + +VG HFFSPA+VM LLE+VR
Sbjct: 389 KQQVFEQLDAVCKPGAILASNTSSLDLNAIAAFTRRPEDVVGLHFFSPANVMRLLEVVRG 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS +V+ + IGK++KK +VVG C GF NRM F Y + A L+E G +D A
Sbjct: 449 ERTSDEVLATAMAIGKQLKKVSVVVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDAA 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FGM MGPF + DL G + A + P + + G+ T G+
Sbjct: 509 LRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDKLCAAGMLGQKTGAGY 568
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R +P++ +E A G+ + L E+ IVE F VNE ++
Sbjct: 569 YRYEPGNRTPQENPDLAPMLEAASREKGI----ERKALDEQYIVERCIFAQVNEGAKILE 624
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA +++D+D+ + G GFP +R
Sbjct: 625 EGIAQRSSDIDVIYLNGYGFPAFR 648
>gi|86748869|ref|YP_485365.1| enoyl-CoA hydratase [Rhodopseudomonas palustris HaA2]
gi|86571897|gb|ABD06454.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodopseudomonas palustris HaA2]
Length = 699
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 273/504 (54%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EA GL+ +V S +A +L + P K+
Sbjct: 152 MIVGGNPIGAAEALKHGLISEIV--EGPASGGEAFARKVLAEKLPARRLRDDDSKLAAAR 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K+A L P C D + A + GL+KE E F KL+ S+ K+
Sbjct: 210 ADRSIFTNAVAAMTKKARGLEAPFACADAIGAAIDLPFEEGLKKEREGFMKLVVSDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +KV GV D G PR V +VAI+G G MG GIA + + PV L E +
Sbjct: 270 QRYAFFAEREAAKVDGVPD-GTKPRPVSRVAIIGAGTMGGGIAMSFANAGIPVTLIETGK 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K + L+TG++ ++ KD D++IEA+ E +++
Sbjct: 329 EQLDRGMGIMQKNYEATAARGGIPADAPAKRMGLITGMVGLDNVKDADLIIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L+ Y P +LASNTS ++++ I T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFTALDAYAKPGAVLASNTSYLNVDDIAATTKRPQDVLGMHFFSPANVMKLCEIVRG 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P ++ + I KKI K P+VVG C GF NRM ++ + L+ G +D
Sbjct: 449 AKTAPDALLTAVSIAKKIAKVPVVVGVCDGFVGNRMLAARSKQSEKLLFEGAPPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R PDPEV+ I + G+ K ++S+++I+E + +P++NE R+
Sbjct: 562 YKYEAGSRSPLPDPEVETLINDTLTKLGL----KRREVSDEEILERMMYPMINEGARILE 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA + +D+D+ + G G+P YR
Sbjct: 618 ENIAARPSDIDVVWLYGYGWPIYR 641
>gi|167823745|ref|ZP_02455216.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
9]
Length = 561
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 271/507 (53%), Gaps = 17/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL DA V + L V+ AR+ H R + +
Sbjct: 19 MIVSGAPVPSEQLAKSGLFDAFVEGDLLEAAVAFARKAGAASGPHPRVRDREIVHEN--- 75
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + A + P CID +EAGV+ G GL E + F L+++
Sbjct: 76 ----AAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPE 131
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L H FF +R K+ V A R ++ VA++G G MG GI + + PV L E
Sbjct: 132 SRALRHAFFGERAAGKIADVP-ADTAVRGIESVAVIGAGTMGGGITMNFLNAGLPVTLLE 190
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ LE G+ +R N ++V KGK+TQEK + ++LL L Y+ KD D+VIEA+ E
Sbjct: 191 TKQEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEE 250
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+
Sbjct: 251 LGVKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEV 310
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G I
Sbjct: 311 VRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQI 370
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 371 DRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTG 429
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y R+A P V + I S GVA ++ + +IVE + + +VNE +
Sbjct: 430 AGWYDYVPGERRAKPSKLVDEMIVAYSSERGVA----RRQIGDAEIVERLVYALVNEGAK 485
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E IA KA+D+D+ + G GFP +R
Sbjct: 486 ILEEKIASKASDIDMVYLTGYGFPLWR 512
>gi|410628150|ref|ZP_11338879.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
gi|410152372|dbj|GAC25648.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
Length = 702
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 185/511 (36%), Positives = 283/511 (55%), Gaps = 23/511 (4%)
Query: 1 MMLTSKPVKGEEAHSL-GLVDAVVA-PNQLVSTARQWALDILEHRRPWVATLYKTDK--I 56
M+++ +P E+A L G+ D VV P L+S A + ++ A + KT I
Sbjct: 152 MIVSGRP---EKASKLAGVFDLVVEDPTNLLSEAMAFVQKVIADG----AQVRKTSDVAI 204
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
+ E+F R +KQA P CI VEA V GL +E E F + + S+
Sbjct: 205 DKSSAPDELFAQYRQGLKKQARGFFAPERCIQAVEASVSLPFEQGLVREGELFMECMGSK 264
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++ H FFA+R + V D R +KKV I+G G MG GIA + PVI+
Sbjct: 265 EARAQQHFFFAERAAAHVSDY-DKSTPTRDIKKVGIIGAGTMGGGIAMNFANAGIPVIML 323
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E+ ++ L+ G+ +R N ++ KKGK+TQ+ E+ ++LL G +Y + DVD+VIEA+ E
Sbjct: 324 ELKQEALDKGLALIRKNYENSAKKGKLTQQAVEERMALLQGSTEYAALSDVDLVIEAVFE 383
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+S+K+++F L+K C ILASNTST+D+N I T + ++G HFFSPA+VM LLE
Sbjct: 384 KMSVKKEVFGALDKVCKKGAILASNTSTLDVNEIAASTSRPEDVIGLHFFSPANVMKLLE 443
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+V+ +TS VI + + KKI K ++VG C GF NRM PY + A L+ G
Sbjct: 444 VVKAEKTSADVIKTCMQMAKKINKVAVLVGVCFGFVGNRMIEPYGREAARLMLEGATPQQ 503
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAI---ATGMQFIENFPERTYKSMIIPIMQEDKRAG 413
ID+ I FG+PMGPF + D+ G + + +FI + P +Y ++ + + R G
Sbjct: 504 IDKVIYDFGLPMGPFTMGDMAGLDIGFYVRESRREFIAHDP--SY-CVVSDRLVKQGRVG 560
Query: 414 ETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
+ +G Y+Y+ R PDPEV + ++ + G+A +S+++I+E I FP++N
Sbjct: 561 LKSGRGAYMYEPGNRMPIPDPEVVEMAKEEAARLGIAQR----DISDQEILERIIFPLIN 616
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E + EGIA K++D+D+ V G GFP YR
Sbjct: 617 EGALILEEGIAAKSSDIDVIYVYGYGFPVYR 647
>gi|167738151|ref|ZP_02410925.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
14]
Length = 543
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 271/507 (53%), Gaps = 17/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL DA V + L V+ AR+ H R D+
Sbjct: 1 MIVSGAPVPSEQLAKSGLFDAFVEGDLLEAAVAFARKAGAASGPHPRV-------RDREI 53
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + A + P CID +EAGV+ G GL E + F L+++
Sbjct: 54 VHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPE 113
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L H FF +R K+ V A R ++ VA++G G MG GI + + PV L E
Sbjct: 114 SRALRHAFFGERAAGKIADVP-ADTAVRGIESVAVIGAGTMGGGITMNFLNAGLPVTLLE 172
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ LE G+ +R N ++V KGK+TQEK + ++LL L Y+ KD D+VIEA+ E
Sbjct: 173 TKQEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEE 232
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+
Sbjct: 233 LGVKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEV 292
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G I
Sbjct: 293 VRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQI 352
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 353 DRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTG 411
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y R+A P V + I S GVA ++ + +IVE + + +VNE +
Sbjct: 412 AGWYDYVPGERRAKPSKLVDEMIVAYSSERGVA----RRQIGDAEIVERLVYALVNEGAK 467
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E IA KA+D+D+ + G GFP +R
Sbjct: 468 ILEEKIASKASDIDMVYLTGYGFPLWR 494
>gi|348028986|ref|YP_004871672.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola nitratireducens FR1064]
gi|347946329|gb|AEP29679.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Glaciecola
nitratireducens FR1064]
Length = 704
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 175/496 (35%), Positives = 278/496 (56%), Gaps = 23/496 (4%)
Query: 17 GLVDAVV-APNQLVSTARQWALDILEHRRPWVAT----LYKTDKIEPLGEAREIFKFARA 71
G+ D +V + ++L + A +A D++E + P L T IE L E ++A+
Sbjct: 169 GVFDLIVDSADELQAAAMAFATDVVEQQMPVKKVCDIELSMTSDIEALFE-----QYAQG 223
Query: 72 QARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGT 131
A K P C+ V+A + GL +E+E F + +++ ++ H FFA+R
Sbjct: 224 VAAKTKGYFA-PGHCVLAVKAAFTHDFKDGLARESELFMECMKTSQARAQQHFFFAERAA 282
Query: 132 SKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVR 191
S V G+ + R +K+VA++G G MG GIA + PV++ E+ + L+ G+ +R
Sbjct: 283 SHVQGIAK-DVVARDIKQVAVIGAGTMGGGIAMNFANAGIPVVMLELKQDALDKGLALIR 341
Query: 192 ANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKY 251
N ++ KKGK+T E+ E+ +SLLTG YE +VD+VIEA+ E +S+K+++F L+K
Sbjct: 342 RNYENSAKKGKLTTEQVEQRMSLLTGTTSYEDLSNVDLVIEAVFEKMSVKKEVFGMLDKV 401
Query: 252 CPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDL 311
C P ILASNTST+DLN I ++G HFFSPA+VM LLEIVR +T+ VI
Sbjct: 402 CKPGAILASNTSTLDLNEIAASVSRPQDVIGLHFFSPANVMKLLEIVRGEKTADDVIKTA 461
Query: 312 LDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPF 371
+ + K I+K ++VG C GF NRM PY + A L+ G +D+ I KFG+PMGPF
Sbjct: 462 MKLAKTIRKVGVLVGVCFGFVGNRMIEPYGREANRLMLEGATPEQVDKVIGKFGLPMGPF 521
Query: 372 RLADLVGFGVAI---ATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-RR 427
+ D+ G + + +FI++ P ++ + R G KG YLY++ R
Sbjct: 522 TMGDMAGLDIGYFVRESRREFIKHDPSYC---IVADKLVAQGRVGLKVGKGAYLYEQGSR 578
Query: 428 KASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAA 487
+ PDPEV + ++ G+ + ++S+++I+E +P++NE + EGIA K++
Sbjct: 579 QPIPDPEVIEIAKQEAKRLGI----QQREISDQEILERCIYPLINEGADILKEGIASKSS 634
Query: 488 DLDIASVMGMGFPPYR 503
D+D+ V G GFP +R
Sbjct: 635 DIDVIYVYGYGFPVFR 650
>gi|386018756|ref|YP_005936780.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 4166]
gi|327478728|gb|AEA82038.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 4166]
Length = 701
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/504 (34%), Positives = 273/504 (54%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ +P+ EA +VD + L+ +A ++E R + +T +E +
Sbjct: 152 MIVSGQPIGAAEALEHYIVDELFE-GDLIEAGLTYARRLVEEGRGPRRSGEQTRGLEGV- 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ + + A+ K+ P L P+ CI VEA GL++E E F + L S +
Sbjct: 210 DNEALIRAKHAEVAKRMPGLFSPLRCIAAVEAATRLPLAEGLKRERELFTECLNSPQRGA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FFA+R K+ + + PR ++ A++GGG MG GIA + + PV L E+N+
Sbjct: 270 LIHSFFAERQAGKIDDLPS-DVTPRPIRTAAVIGGGTMGVGIALSFANAGVPVKLLEIND 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+ R R + VK+G +T++ E+ ++L+ GV DY + D D+V+EA+ E + +
Sbjct: 329 EALQRGLQRARETYAASVKRGSLTEDAMEQRLALIAGVTDYGALADADVVVEAVFEEMGV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQ+F L+ C P ILASNTS++DLN I T + +VG HFFSPA+VM LLE+VR
Sbjct: 389 KQQVFEQLDAVCKPGAILASNTSSLDLNAIAGFTRRPEDVVGMHFFSPANVMRLLEVVRG 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS +V+ + IGK++KK +VVG C GF NRM F Y + A L+E G +D A
Sbjct: 449 ERTSDEVLAAAMAIGKQLKKVSVVVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDAA 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FGM MGPF + DL G + A + P + + G+ T G+
Sbjct: 509 LRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDKLCAAGMLGQKTGAGY 568
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R +P++ +E A G+ + L E+ IVE F +VNE ++
Sbjct: 569 YRYEPGNRTPQENPDLAPMLEAASREKGI----ERQALDEQYIVERCIFALVNEGAKILE 624
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA +++D+D+ + G GFP +R
Sbjct: 625 EGIAQRSSDIDVIYLNGYGFPAFR 648
>gi|167719148|ref|ZP_02402384.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
DM98]
Length = 694
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 271/507 (53%), Gaps = 17/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL DA V + L V+ AR+ H R + +
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGDLLEAAVAFARKAGAASGPHPRVRDREIVHEN--- 208
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + A + P CID +EAGV+ G GL E + F L+++
Sbjct: 209 ----AAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L H FF +R K+ V A R ++ VA++G G MG GI + + PV L E
Sbjct: 265 SRALRHAFFGERAAGKIADVP-ADTAVRGIESVAVIGAGTMGGGITMNFLNAGLPVTLLE 323
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ LE G+ +R N ++V KGK+TQEK + ++LL L Y+ KD D+VIEA+ E
Sbjct: 324 TKQEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEE 383
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+
Sbjct: 384 LGVKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEV 443
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G I
Sbjct: 444 VRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQI 503
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 504 DRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTG 562
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y R+A P V + I S GVA ++ + +IVE + + +VNE +
Sbjct: 563 AGWYDYVPGERRAKPSKLVDEMIVAYSSERGVA----RRQIGDAEIVERLVYALVNEGAK 618
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E IA KA+D+D+ + G GFP +R
Sbjct: 619 ILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|217421439|ref|ZP_03452943.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
576]
gi|217395181|gb|EEC35199.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
576]
Length = 694
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 271/507 (53%), Gaps = 17/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL DA V + L V+ AR+ H R + +
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGDLLEVAVAFARKAGAASGPHPRVRDREIVHEN--- 208
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + A + P CID +EAGV+ G GL E + F L+++
Sbjct: 209 ----AAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L H FF +R K+ V A R ++ VA++G G MG GI + + PV L E
Sbjct: 265 SRALRHAFFGERAAGKIADVP-ADTAVRGIESVAVIGAGTMGGGITMNFLNAGLPVTLLE 323
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ LE G+ +R N ++V KGK+TQEK + ++LL L Y+ KD D+VIEA+ E
Sbjct: 324 TKQEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEE 383
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+
Sbjct: 384 LGVKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEV 443
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G I
Sbjct: 444 VRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQI 503
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 504 DRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTG 562
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y R+A P V + I S GVA ++ + +IVE + + +VNE +
Sbjct: 563 AGWYDYVPGERRAKPSKLVDEMIVAYSSERGVA----RRQIGDAEIVERLVYALVNEGAK 618
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E IA KA+D+D+ + G GFP +R
Sbjct: 619 ILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|407713391|ref|YP_006833956.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
BR3459a]
gi|407235575|gb|AFT85774.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
BR3459a]
Length = 692
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 181/506 (35%), Positives = 275/506 (54%), Gaps = 15/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIE-PL 59
M+++ PV ++ GL D +V L A +A + P + KI+ P
Sbjct: 150 MIVSGAPVDSQKLAGSGLFDELV-EGDLAEAALAFARKVGAQAGPHPKV--RERKIDHPN 206
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
E +FAR A + P+ CID VEAGV G GL E E F L+++ +
Sbjct: 207 AEG--FIQFARNSVAAVAKHFPAPLKCIDAVEAGVKHGFDKGLAFERECFVALVQTPESR 264
Query: 120 SLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+L H FF +R SK+P V D + R +++VA++G G MG GIA + + PV L E
Sbjct: 265 ALRHAFFGERAASKIPDVPADTPV--REIRRVAVIGAGTMGGGIAMNFVNAGIPVTLLET 322
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
++ L+ G+ +R N ++ VKKGK+ E ++L+T L Y+ KD D+++EA+ E +
Sbjct: 323 KQEALQRGLATIRGNYEASVKKGKLKAGALEARMALITPTLSYDDLKDADLIVEAVFEEL 382
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+V
Sbjct: 383 GVKEQVFRRLDEIAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLEVV 442
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +T+ V+ ++ + K+I+KT +V G C GF NRM Y + A ++E G +D
Sbjct: 443 RGRETAKDVLATVMKLAKQIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVD 502
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
RAI KFG MGPFR++DL G + A + + P+ Y S I + E R G+ T
Sbjct: 503 RAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEQPDLHY-SKIADRLCETGRFGQKTGG 561
Query: 419 GFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y R A P K ++ ++ + K+ + +IVE + F +VNE ++
Sbjct: 562 GWYDYVAGERTARP----SKLVDDMIVAYSKEVNAERRKIGDDEIVERLVFALVNEGAKI 617
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP +R
Sbjct: 618 LEEGIASKASDIDMVYLTGYGFPLHR 643
>gi|53723637|ref|YP_103090.1| fatty oxidation complex subunit alpha [Burkholderia mallei ATCC
23344]
gi|76810376|ref|YP_333850.1| fatty oxidation complex subunit alpha [Burkholderia pseudomallei
1710b]
gi|121599487|ref|YP_993247.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
domain-containing protein [Burkholderia mallei SAVP1]
gi|124384112|ref|YP_001029308.1| fatty oxidation complex subunit alpha [Burkholderia mallei NCTC
10229]
gi|126440121|ref|YP_001059329.1| enoyl-CoA hydratase [Burkholderia pseudomallei 668]
gi|126449433|ref|YP_001080755.1| enoyl-CoA hydratase [Burkholderia mallei NCTC 10247]
gi|166998730|ref|ZP_02264584.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei
PRL-20]
gi|167910526|ref|ZP_02497617.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
112]
gi|167918554|ref|ZP_02505645.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
BCC215]
gi|226197152|ref|ZP_03792729.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
Pakistan 9]
gi|238562188|ref|ZP_00440761.2| peroxisomal bifunctional enzyme [Burkholderia mallei GB8 horse 4]
gi|254177997|ref|ZP_04884652.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei ATCC
10399]
gi|254189161|ref|ZP_04895672.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
Pasteur 52237]
gi|254200037|ref|ZP_04906403.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei FMH]
gi|254206372|ref|ZP_04912724.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei JHU]
gi|254259421|ref|ZP_04950475.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1710a]
gi|254358214|ref|ZP_04974487.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei
2002721280]
gi|418540588|ref|ZP_13106116.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1258a]
gi|418546832|ref|ZP_13112021.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1258b]
gi|52427060|gb|AAU47653.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
mallei ATCC 23344]
gi|76579829|gb|ABA49304.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
pseudomallei 1710b]
gi|121228297|gb|ABM50815.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei SAVP1]
gi|124292132|gb|ABN01401.1| putative fatty oxidation complex, alpha subunit [Burkholderia
mallei NCTC 10229]
gi|126219614|gb|ABN83120.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
668]
gi|126242303|gb|ABO05396.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei NCTC
10247]
gi|147749633|gb|EDK56707.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei FMH]
gi|147753815|gb|EDK60880.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei JHU]
gi|148027341|gb|EDK85362.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei
2002721280]
gi|157936840|gb|EDO92510.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
Pasteur 52237]
gi|160699036|gb|EDP89006.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei ATCC
10399]
gi|225930531|gb|EEH26541.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
Pakistan 9]
gi|238523039|gb|EEP86480.1| peroxisomal bifunctional enzyme [Burkholderia mallei GB8 horse 4]
gi|243065085|gb|EES47271.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei
PRL-20]
gi|254218110|gb|EET07494.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1710a]
gi|385361078|gb|EIF66976.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1258a]
gi|385362861|gb|EIF68655.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1258b]
Length = 694
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 271/507 (53%), Gaps = 17/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL DA V + L V+ AR+ H R + +
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGDLLEAAVAFARKAGAASGPHPRVRDREIVHEN--- 208
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + A + P CID +EAGV+ G GL E + F L+++
Sbjct: 209 ----AAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L H FF +R K+ V A R ++ VA++G G MG GI + + PV L E
Sbjct: 265 SRALRHAFFGERAAGKIADVP-ADTAVRGIESVAVIGAGTMGGGITMNFLNAGLPVTLLE 323
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ LE G+ +R N ++V KGK+TQEK + ++LL L Y+ KD D+VIEA+ E
Sbjct: 324 TKQEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEE 383
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+
Sbjct: 384 LGVKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEV 443
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G I
Sbjct: 444 VRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQI 503
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 504 DRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTG 562
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y R+A P V + I S GVA ++ + +IVE + + +VNE +
Sbjct: 563 AGWYDYVPGERRAKPSKLVDEMIVAYSSERGVA----RRQIGDAEIVERLVYALVNEGAK 618
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E IA KA+D+D+ + G GFP +R
Sbjct: 619 ILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|337279644|ref|YP_004619116.1| 3-hydroxybutyryl-CoA epimerase [Ramlibacter tataouinensis TTB310]
gi|334730721|gb|AEG93097.1| 3-hydroxybutyryl-CoA epimerase-like protein [Ramlibacter
tataouinensis TTB310]
Length = 700
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 187/517 (36%), Positives = 282/517 (54%), Gaps = 24/517 (4%)
Query: 1 MMLTSKPVKGE---EAHSLGLVDAVVAPNQ-LVSTARQWALDILEHR-RPWVATLYKTDK 55
M+++ +PVK E + L D + + Q L A +A + + R P V L
Sbjct: 152 MIVSGEPVKSELLAQQPGQKLFDKMASSAQALQEEALAFARSVADTRPLPLVRNLPCK-- 209
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
P G+A F+FAR + A N P+ C+D VE G+ E E F L+ +
Sbjct: 210 -HPQGDA--YFQFARNMVKGMAKNFPAPVKCVDAVEFATRKKFDEGMTLEREIFTNLMFT 266
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++L HIF A+R SK+P V + R +K VA++G G MG GI+ + + PV +
Sbjct: 267 PESRALRHIFMAERAASKIPDVPE-DTPQREIKAVAVIGAGTMGGGISMNFLNAGIPVTI 325
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E+ ++ L+ GI +R N ++++KKGK+ Q+K+E+ +SLL LDY+ D+VIEA+
Sbjct: 326 LEMKQEALDRGISTIRKNYEAQIKKGKLKQDKYEQRMSLLKTTLDYQDLAQADLVIEAVF 385
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +KQ++F L+ ILASNTST+D+N I T +VG HFFSPA+VM LL
Sbjct: 386 EEMGVKQKVFETLDGVMKKGAILASNTSTLDVNKIAAFTKRPQDVVGMHFFSPANVMKLL 445
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR +T+ V+ ++ + KKIKKT +V G C GF NRM Y++ A L++ G
Sbjct: 446 EVVRGGKTAKDVLATVMQLAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPQ 505
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+AI KFG MGPFR+ DL G + A + + Y S + E R G+
Sbjct: 506 QVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRATERADMKY-SRTADKLCELGRFGQK 564
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T G+Y Y +R A P V+ I R G I+P+ K+S+++IV+ + + +VNE
Sbjct: 565 TGAGWYDYQAGKRDAIPSKLVEDMIAAHRKELG--IEPR--KISDEEIVQRLVYALVNEG 620
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRG 511
+ EGIA +A+D+D+ + G GFP IHRG
Sbjct: 621 AHILEEGIASRASDIDMVYLTGYGFP-------IHRG 650
>gi|163792916|ref|ZP_02186892.1| PROBABLE TRIFUNCTONAL: ENOYL-COA HYDRATASE AND
DELTA3-CIS-DELTA2-TRANS-ENOYL-COA ISOMERASE AND [alpha
proteobacterium BAL199]
gi|159181562|gb|EDP66074.1| PROBABLE TRIFUNCTONAL: ENOYL-COA HYDRATASE AND
DELTA3-CIS-DELTA2-TRANS-ENOYL-COA ISOMERASE AND [alpha
proteobacterium BAL199]
Length = 699
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 276/504 (54%), Gaps = 7/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++++ + V EA LG++DA+ A L+ A A+++ + + +D +
Sbjct: 153 LIVSGRLVSEREALKLGMIDAI-ADGDLIDAAVAKAIELADVGENPRRSSTLSDGLTEAQ 211
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+F R K+A + P C+ +EA G + E E+F+ L+ + ++
Sbjct: 212 ANPGLFDAFRKSMEKRARGMNAPYACVRCIEAATRLPFAEGRRFEHEEFKALVTAVEARA 271
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ H FFA+R SK+P V D + ++ ++G G MG GIA + PV + E +E
Sbjct: 272 MRHAFFAEREVSKIPDVPD-STPTQPIESAGVIGCGTMGGGIAMVFANAGIPVTIVESDE 330
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ ++RAN Q+ V KG+M+Q+ ++ ++ +TG D+ + D D+V+EA+ E +++
Sbjct: 331 GALDNGLTKIRANYQATVDKGRMSQQAMDERMASITGATDFAAIADADIVVEAVFEEMAV 390
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQ+F L+ C P +LA+NTST+D++ I T + ++G HFFSPA+VM LLE+VR
Sbjct: 391 KQQVFRSLDGICQPDVVLATNTSTLDVDTIAAATGRPESVIGTHFFSPANVMRLLEVVRG 450
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++SPQ I + + K + K ++VG C GF NRM Y + A LVE G +DR
Sbjct: 451 AKSSPQTIATAMGLSKTLGKVGVLVGVCDGFVGNRMLHQYLREAAFLVEEGALPQDVDRV 510
Query: 361 ITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
I +FG PMGPF ++DL G V Q E + Y + + E R G+ T G
Sbjct: 511 IFEFGFPMGPFAMSDLAGNDVGWRIRKAQAAERPSNQRYSGTLADRICERGRFGQKTGAG 570
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
+Y Y + R PDP+++ I G++ +S+++I+E +P+VNE ++
Sbjct: 571 WYRYKDGRTPLPDPDIEALILATSQELGMS----RRVISDQEILERCLYPLVNEGAKILD 626
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA++A+D+D+ + G GFP YR
Sbjct: 627 EGIALRASDVDVVWMQGYGFPRYR 650
>gi|134277281|ref|ZP_01763996.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
305]
gi|134250931|gb|EBA51010.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
305]
Length = 694
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 271/507 (53%), Gaps = 17/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL DA V + L V+ AR+ H R + +
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGDLLEAAVAFARKAGAASGPHPRVRDREIVHEN--- 208
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + A + P CID +EAGV+ G GL E + F L+++
Sbjct: 209 ----AAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L H FF +R K+ V A R ++ VA++G G MG GI + + PV L E
Sbjct: 265 SRALRHAFFGERAAGKIADVP-ADTAVRGIESVAVIGAGTMGGGITMNFLNAGLPVTLLE 323
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ LE G+ +R N ++V KGK+TQEK + ++LL L Y+ KD D+VIEA+ E
Sbjct: 324 TKQEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEE 383
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+
Sbjct: 384 LGVKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTGRPQDVVGLHFFSPANVMKLLEV 443
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G I
Sbjct: 444 VRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQI 503
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 504 DRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTG 562
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y R+A P V + I S GVA ++ + +IVE + + +VNE +
Sbjct: 563 AGWYDYVPGERRAKPSKLVDEMIVAYSSERGVA----RRQIGDAEIVERLVYALVNEGAK 618
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E IA KA+D+D+ + G GFP +R
Sbjct: 619 ILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|146280495|ref|YP_001170648.1| enoyl-CoA hydratase [Pseudomonas stutzeri A1501]
gi|145568700|gb|ABP77806.1| enoyl-CoA hydratase [Pseudomonas stutzeri A1501]
Length = 701
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/505 (34%), Positives = 275/505 (54%), Gaps = 10/505 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ +P+ EA +VD + L+ +A ++E R + +T +E +
Sbjct: 152 MIVSGQPIGAAEALEHHIVDELFE-GDLIEAGLTYARRLVEEGRGPRRSGEQTRGLEGV- 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ + + A+ K+ P L P+ CI VEA GL++E E F + L S +
Sbjct: 210 DNEALIRAKHAEVAKRMPGLFSPLRCIAAVEAATRLPLAEGLKRERELFTECLNSPQRGA 269
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L+H FFA+R K+ + +D+ L P ++ A++GGG MG GIA + + PV L E+N
Sbjct: 270 LIHSFFAERQAGKIDDLPSDVKLRP--IRTAAVIGGGTMGVGIALSFANTGVPVKLLEIN 327
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+ R R + VK+G +T++ E+ ++L+ GV DY + D D+V+EA+ E +
Sbjct: 328 DEALQRGLQRARETYAASVKRGSLTEDAMEQRLALIAGVTDYGALADADVVVEAVFEEMG 387
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+KQQ+F L+ C P ILASNTS++DLN I T + +VG HFFSPA+VM LLE+VR
Sbjct: 388 VKQQVFEQLDAVCKPGAILASNTSSLDLNAIAAFTKRPEDVVGLHFFSPANVMRLLEVVR 447
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+TS +V+ + IGK++KK +VVG C GF NRM F Y + A L+E G +D
Sbjct: 448 GERTSDEVLATAMAIGKQLKKVSVVVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDA 507
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
A+ FGM MGPF + DL G + A + P + + G+ T G
Sbjct: 508 ALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDKLCAAGMLGQKTGAG 567
Query: 420 FYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y+ R +P++ +E A G+ + L E+ IVE F +VNE ++
Sbjct: 568 YYRYEPGNRTPQENPDLAPMLEAASREKGI----ERKALDEQYIVERCIFALVNEGAKIL 623
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA +++D+D+ + G GFP +R
Sbjct: 624 EEGIAQRSSDIDVIYLNGYGFPAFR 648
>gi|53719060|ref|YP_108046.1| fatty acid degradation protein [Burkholderia pseudomallei K96243]
gi|167815336|ref|ZP_02447016.1| putative fatty acid degradation protein (possibly trifunctional)
[Burkholderia pseudomallei 91]
gi|167902285|ref|ZP_02489490.1| putative fatty acid degradation protein (possibly trifunctional)
[Burkholderia pseudomallei NCTC 13177]
gi|237812653|ref|YP_002897104.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
gi|254179451|ref|ZP_04886050.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1655]
gi|418382845|ref|ZP_12966770.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
354a]
gi|418553051|ref|ZP_13117892.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
354e]
gi|52209474|emb|CAH35426.1| putative fatty acid degradation protein (possibly trifunctional)
[Burkholderia pseudomallei K96243]
gi|184209991|gb|EDU07034.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1655]
gi|237506159|gb|ACQ98477.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
gi|385372167|gb|EIF77292.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
354e]
gi|385376964|gb|EIF81593.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
354a]
Length = 694
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 271/507 (53%), Gaps = 17/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL DA V + L V+ AR+ H R + +
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGDLLEAAVAFARKAGAASGPHPRVRDREIVHEN--- 208
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + A + P CID +EAGV+ G GL E + F L+++
Sbjct: 209 ----AAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L H FF +R K+ V A R ++ VA++G G MG GI + + PV L E
Sbjct: 265 SRALRHAFFGERAAGKIADVP-ADTAVRGIESVAVIGAGTMGGGITMNFLNAGLPVTLLE 323
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ LE G+ +R N ++V KGK+TQEK + ++LL L Y+ KD D+VIEA+ E
Sbjct: 324 TKQEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEE 383
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+
Sbjct: 384 LGVKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTGRPQDVVGLHFFSPANVMKLLEV 443
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G I
Sbjct: 444 VRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQI 503
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 504 DRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTG 562
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y R+A P V + I S GVA ++ + +IVE + + +VNE +
Sbjct: 563 AGWYDYVPGERRAKPSKLVDEMIVAYSSERGVA----RRQIGDAEIVERLVYALVNEGAK 618
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E IA KA+D+D+ + G GFP +R
Sbjct: 619 ILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|386861445|ref|YP_006274394.1| fatty oxidation complex subunit alpha [Burkholderia pseudomallei
1026b]
gi|418533716|ref|ZP_13099575.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1026a]
gi|385360676|gb|EIF66590.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1026a]
gi|385658573|gb|AFI65996.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1026b]
Length = 694
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/507 (36%), Positives = 271/507 (53%), Gaps = 17/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL DA V + L V+ AR+ H R + +
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGDLLEAAVAFARKAGAASGPHPRVRDREIVHEN--- 208
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + A + P CID +EAGV+ G GL E + F L+++
Sbjct: 209 ----AAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L H FF +R K+ V A R ++ VA++G G MG GI + + PV L E
Sbjct: 265 SRALRHAFFGERAAGKIADVP-ADTAVRGIESVAVIGAGTMGGGITMNFLNAGLPVTLLE 323
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ LE G+ +R N ++V KGK+TQEK + ++LL L Y+ KD D+VIEA+ E
Sbjct: 324 TKQEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEE 383
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+
Sbjct: 384 LGVKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEV 443
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+ V+ ++ + KK++KT +V G C GF NRM Y + A ++E G I
Sbjct: 444 VRGEHTAKDVLATVMQLAKKVRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQI 503
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 504 DRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTG 562
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y R+A P V + I S GVA ++ + +IVE + + +VNE +
Sbjct: 563 AGWYDYVPGERRAKPSKLVDEMIVAYSSERGVA----RRQIGDAEIVERLVYALVNEGAK 618
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E IA KA+D+D+ + G GFP +R
Sbjct: 619 ILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|456358170|dbj|BAM92615.1| 3-hydroxyacyl-CoA dehydrogenase [Agromonas oligotrophica S58]
Length = 697
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/504 (34%), Positives = 277/504 (54%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EA GL++ ++ S +A +L RP KI
Sbjct: 152 MIVGGDPIGAAEALKSGLIEEII--EGPASGGEAFARKVLAENRPLRKLRDDESKIAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K++ L P D V + GL+KE E F KL+ S+ K+
Sbjct: 210 ADRSIFTNAVAAITKKSRGLEAPFAAADAVGYAIDLPFDEGLKKEREGFLKLVASDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +K+ GV + G R+V++VAI+G G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREAAKIAGVPE-GTKGRKVERVAIIGAGTMGGGIAMSFANAGVPVTLIETAE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L G+G ++ N ++ +G + + K ++L+ GV+ E+ D D++IEA+ E +++
Sbjct: 329 EQLRRGMGIMQKNWEATAARGGIPADAPAKRMALINGVVGLENVGDADLIIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L++Y P +LASNTS ++++ I ++T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFGKLDQYAKPGAVLASNTSYLNIDDIAKQTSRPQDVLGMHFFSPANVMKLCEIVRA 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P +V + I +KI K P VVG C GF NRM + A L+ G +D
Sbjct: 449 EKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQAEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ +A PDP+V++ I++ + G+ K +S+++I+E + +P++NE ++ A
Sbjct: 562 YKYEAGSRAPLPDPDVERLIDETLAKLGL----KRRAVSDEEILERMMYPMINEGAKILA 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ + G G+P YR
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYR 641
>gi|351732218|ref|ZP_08949909.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax radicis
N35]
Length = 699
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/456 (37%), Positives = 258/456 (56%), Gaps = 16/456 (3%)
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P G+A F+FAR + A N P C+D VEA G+ E E F L+ +
Sbjct: 210 HPEGDA--YFQFARNMVKGMAKNFPAPAKCVDAVEAATKKKFAEGMLVEREIFINLMWTP 267
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H+F A+R SK+P V R +K V ++G G MG GI+ + + PV +
Sbjct: 268 ESRALRHLFMAERAASKIPDVAS-DTPKRDIKLVGVIGAGTMGGGISMNFLNAGIPVKIL 326
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E+ ++ L+ GI ++ N +++VKKGK+ Q+K+++ ++LL+ L Y+ FKD D++IEA+ E
Sbjct: 327 EMKQEALDRGIATIKKNYEAQVKKGKLKQDKYDQRMALLSTTLSYDDFKDCDLIIEAVFE 386
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+ +F L+ P ILASNTST+D++ I T +VG HFFSPA+VM LLE
Sbjct: 387 EMGVKEAVFKQLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLE 446
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR +T+ V+ ++ IGKKIKKT +V G C GF NRM Y++ A L++ G
Sbjct: 447 VVRGKETAKDVLATVMAIGKKIKKTSVVSGVCDGFIGNRMIEQYSRQAGFLLDEGCTPQQ 506
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+D+A+ KFG MGPFR+ DL G + A + + Y S + E R G+ T
Sbjct: 507 VDKAVEKFGFAMGPFRMGDLAGNDIGWAIRKRRSVERADMKY-SRTADKLCELGRFGQKT 565
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y +R A P V K IE R G I P+ K+S+++IV+ + F +VNE
Sbjct: 566 GAGWYDYQAGKRDAIPSDLVNKMIEDHRKELG--ITPR--KISDEEIVQRLVFALVNEGA 621
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRG 511
+ +GIA K+ D+D+ + G GFP IHRG
Sbjct: 622 HILEDGIASKSGDIDMVYLTGYGFP-------IHRG 650
>gi|365091125|ref|ZP_09328632.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax sp. NO-1]
gi|363416243|gb|EHL23363.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax sp. NO-1]
Length = 699
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 172/456 (37%), Positives = 257/456 (56%), Gaps = 16/456 (3%)
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P G+A F+FAR + A N P C+D VEA G+ E E F L+ +
Sbjct: 210 HPEGDA--YFQFARNMVKGMAKNFPAPAKCVDAVEAATKKKFAEGMLVEREIFINLMWTP 267
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H+F A+R SK+P V R +K V ++G G MG GI+ + + PV +
Sbjct: 268 ESRALRHLFMAERAASKIPDVAS-DTPKRDIKLVGVIGAGTMGGGISMNFLNAGIPVKIL 326
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E+ ++ L+ G+ ++ N +++VKKGK+ Q+K+E+ ++LL+ L Y+ KD D++IEA+ E
Sbjct: 327 EMKQEALDRGVATIKKNYEAQVKKGKLKQDKYEQRMALLSTTLSYDDLKDCDLIIEAVFE 386
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+ +F L+ P ILASNTST+D++ I T +VG HFFSPA+VM LLE
Sbjct: 387 EMGVKEAVFKQLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLE 446
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR +T+ V+ ++ IGKKIKKT +V G C GF NRM Y++ A L++ G
Sbjct: 447 VVRGKETAKDVLATVMAIGKKIKKTSVVSGVCDGFIGNRMIEQYSRQAGFLLDEGCTPQQ 506
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+D+AI KFG MGPFR+ DL G + A + + Y S + E R G+ T
Sbjct: 507 VDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVERADMKY-SRTADKLCELGRFGQKT 565
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y +R A P V K IE R G I P+ K+S+++IV+ + F +VNE
Sbjct: 566 GAGWYDYQAGKRDAIPSDLVNKMIEDHRKELG--ITPR--KISDEEIVQRLVFALVNEGA 621
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRG 511
+ +GIA K+ D+D+ + G GFP IHRG
Sbjct: 622 HILEDGIASKSGDIDMVYLTGYGFP-------IHRG 650
>gi|407939373|ref|YP_006855014.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
gi|407897167|gb|AFU46376.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
Length = 699
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/457 (37%), Positives = 259/457 (56%), Gaps = 18/457 (3%)
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P G+A F+FAR + A N P C+D VEA G+ E E F L+ +
Sbjct: 210 HPEGDA--YFQFARNMVKGMAKNFPAPAKCVDAVEAATKKKFAEGMLVEREIFINLMWTP 267
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRR-VKKVAILGGGLMGSGIATALILSNYPVIL 175
++L H+F A+R SK+P V P+R +K V ++G G MG GI+ + + PV +
Sbjct: 268 ESRALRHLFMAERAASKIPDVASD--TPKRDIKLVGVIGAGTMGGGISMNFLNAGIPVKI 325
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E+ ++ L+ G+ ++ N +++VKKGK+ Q+K+E+ ++LL+ L Y+ KD D++IEA+
Sbjct: 326 LEMKQEALDRGVATIKKNYEAQVKKGKLKQDKYEQRMALLSTTLSYDDLKDCDLIIEAVF 385
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +K+ +F L+ P ILASNTST+D++ I T +VG HFFSPA+VM LL
Sbjct: 386 EEMGVKEAVFKQLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLL 445
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR +T+ V+ ++ IGKKIKKT +V G C GF NRM Y++ A L++ G
Sbjct: 446 EVVRGKETAKDVLATVMAIGKKIKKTSVVSGVCDGFIGNRMIEQYSRQAGFLLDEGCTPQ 505
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+AI KFG MGPFR+ DL G + A + + Y S + E R G+
Sbjct: 506 QVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVERADMKY-SRTADKLCELGRFGQK 564
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T G+Y Y +R A P V K IE R G I P+ K+S+++IV+ + F +VNE
Sbjct: 565 TGAGWYDYQAGKRDAIPSDLVNKMIEDHRKELG--ITPR--KISDEEIVQRLVFALVNEG 620
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRG 511
+ +GIA K+ D+D+ + G GFP IHRG
Sbjct: 621 AHILEDGIASKSGDIDMVYLTGYGFP-------IHRG 650
>gi|187923916|ref|YP_001895558.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phytofirmans PsJN]
gi|187715110|gb|ACD16334.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
phytofirmans PsJN]
Length = 694
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 274/505 (54%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ GL D + A L A +A + P + KIE
Sbjct: 152 MIVSGAPVMSEKLADSGLFDEL-AQGDLAEAALAFARKVSAKEGPHPKV--RDRKIEHPN 208
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A I +FAR A N P+ CID VEAGV G GL E E F L+++ +
Sbjct: 209 AAGFI-QFARNTVATMAKNFPAPLKCIDAVEAGVQKGFDKGLAFERECFMALVQTPESHA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V +D + R + +VA++G G MG GIA I + PV L E
Sbjct: 268 LRHAFFGERAASKIPDVPSDTPV--RDIGQVAVIGAGTMGGGIAMNFINAGIPVTLLETK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+ +R N ++ VKKGK+ E + ++L+T L Y+ K+ D+++EA+ E +
Sbjct: 326 QEALDRGLATIRKNYEATVKKGKLKPEVLGQRMALITPTLSYDDLKNADLIVEAVFEELG 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q F L++ ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKEQAFKRLDEVAKQGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+T+ V+ ++++ KKIKKT +V G C GF NRM Y + A ++E G +D+
Sbjct: 446 GKETAKDVLATVMNLAKKIKKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQVDK 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI KFG MGPFR++DL G + A + P+ Y S I + E R G+ T G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYLEHPDMHY-SKIADRLCETGRFGQKTGGG 564
Query: 420 FYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y R A P V I + D + K+S+++IVE + F +VNE ++
Sbjct: 565 WYDYKAGDRTAYPSKVVDDMIVAFSKET----DTERRKISDEEIVERLVFALVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP YR
Sbjct: 621 EEGIASKASDIDMVYLTGYGFPLYR 645
>gi|299533351|ref|ZP_07046734.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni S44]
gi|298718667|gb|EFI59641.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni S44]
Length = 699
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 259/449 (57%), Gaps = 11/449 (2%)
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P GEA F+FA + + N P+ C++ V+ G+ E E F +L+ +
Sbjct: 210 HPQGEA--YFEFAATMVQGMSKNFPAPLRCLEAVKNATTKKFDDGMVAERETFMQLMMTP 267
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAP-RRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+SL H+F A+R SK+P V G P R ++ V ++G G MG GI+ + + PV +
Sbjct: 268 ESRSLRHLFMAERAASKIPDVP--GDTPVREIRTVGVIGAGTMGGGISMNFLNAGIPVTI 325
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E ++ L+ G+ +R N +++VKKGK++++K+E+ +SLL+ L+Y K+ D++IEA+
Sbjct: 326 LETKQEALDRGVATIRKNYEAQVKKGKLSEQKYEQRMSLLSTTLNYGDLKNADLIIEAVF 385
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +K+Q+F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LL
Sbjct: 386 EELGVKEQVFKQLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLL 445
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR T+ V+ ++ +GKKIKKT +V G C GF NRM Y++ A L++ G
Sbjct: 446 EVVRGKATAKDVLATVMKVGKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGASPQ 505
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+AI KFG MGPFR+ DL G + A + P+ Y S + E R G+
Sbjct: 506 QVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRYVEKPDMKY-SASADRLCELGRFGQK 564
Query: 416 TRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T G+Y Y +R A P V K I++ R G I P+ K+S+++IV+ + + + NE
Sbjct: 565 TGAGWYDYVPGKRDAIPSEVVAKMIDEHRKSLG--ITPR--KISDEEIVQRLVYALANEG 620
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ +GIA K+ D+D+ + G GFP +R
Sbjct: 621 AHILEDGIASKSGDIDMVYLTGYGFPLWR 649
>gi|431929301|ref|YP_007242335.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas stutzeri RCH2]
gi|431827588|gb|AGA88705.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas stutzeri RCH2]
Length = 701
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 270/506 (53%), Gaps = 12/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ +P+ EA +VD + LV + ++E R T +T +E
Sbjct: 152 MIVSGQPISAAEAVEHNIVDELFE-GDLVEAGLAYVRRMVEEGRTPRRTGEQTQGLEG-A 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ + + A+ K+ P L P+ CI VEA GL++E E F + L S +
Sbjct: 210 DNEALIRAKHAEVAKRMPGLFSPLRCIAAVEAATKLPLAEGLKRERELFAECLNSPQRGA 269
Query: 121 LVHIFFAQRGTSKVPGVTDL--GLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
LVH FFA+R K+ DL PR + A++GGG MG GIA + + PV L E+
Sbjct: 270 LVHSFFAERQAGKI---NDLPSDTKPRSINSAAVIGGGTMGVGIALSFANAGVPVKLLEI 326
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
NE+ L+ G+ R R + VK+G +T++ E+ ++L+ GV +Y + D D+V+EA+ E +
Sbjct: 327 NEEALQRGLQRARDTYAASVKRGSLTEDAMEQRLALIEGVTEYAALADADVVVEAVFEEM 386
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+KQQ+F L+ C P ILASNTS++DL+ I T + +VG HFFSPA+VM LLE+V
Sbjct: 387 GVKQQVFEQLDAICKPGAILASNTSSLDLDAIAAFTKRPEDVVGLHFFSPANVMRLLEVV 446
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +TS +V+ + IGK++KK +VVG C GF NRM F Y + A L+E G +D
Sbjct: 447 RGAKTSDEVLATAMAIGKQLKKVSVVVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVD 506
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ FGM MGPF + DL G + A + P + + G+ T
Sbjct: 507 AALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDKLCAAGMLGQKTGA 566
Query: 419 GFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y+ R +P++ +E A G+ + L E+ IVE F +VNE ++
Sbjct: 567 GYYRYEPGNRTPQENPDLAPMLEAASLEKGI----ERKALDEQYIVERCIFALVNEGAKI 622
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA +++D+D+ + G GFP +R
Sbjct: 623 LEEGIAQRSSDIDVIYLNGYGFPAFR 648
>gi|319780809|ref|YP_004140285.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317166697|gb|ADV10235.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 688
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 174/502 (34%), Positives = 267/502 (53%), Gaps = 20/502 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ P+ EAH+ GLVDAV L + A +A +I P+ D+ E L
Sbjct: 152 MIVSGAPIGATEAHAAGLVDAVF-EGDLTTHAVNFAGEIARKGGPFTPV---RDRNEGLK 207
Query: 61 EAR-EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+A F A ++A L PI C V V A L E F KL+ S+ +
Sbjct: 208 QADLAAFDVEAADLARKARGLEAPIACAQSVRNAVTLPFDAALAAERALFVKLVASDQSR 267
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ H+FFA+R +K+PG + RR+ +V ++G G MG GIA A Y VIL E +
Sbjct: 268 AQRHLFFAEREAAKLPGKD---IVKRRIARVGVIGAGTMGGGIAMAFANGGYSVILLETS 324
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L+ G+ + N V +G ++++ + ++ G DY D D+++EA+ E+++
Sbjct: 325 HEALQRGLATIDRNYSVSVTRGSLSEDAKRQRLAQFKGSTDYVDLADCDLIVEAVFEDMA 384
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+++F LE P ILA+NTS +D+N I T ++G HFFSPA+VM LLEIVR
Sbjct: 385 VKKEVFGKLEAVAKPGAILATNTSYLDINEIAGSTSRPQDVLGLHFFSPANVMKLLEIVR 444
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+T+P + +D+ ++I K +VVG C GF NRM + L+ G ID+
Sbjct: 445 AEKTAPDALATSVDLARRIGKVAVVVGVCHGFVGNRMLAARGSESEALLLEGATPSQIDQ 504
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
T FG PMGPF++ DL G + N R K++I + E R G+ T +G
Sbjct: 505 VFTDFGWPMGPFQMGDLAGLDIG-------WRNRKARGQKAVIADTLCEQGRFGQKTGRG 557
Query: 420 FYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
FYLY+ R PDPEV+ I + +G+A P+ +S ++IVE +P++NE ++
Sbjct: 558 FYLYEAGARTPVPDPEVEALIRDKAAENGIA--PR--AISAEEIVERTLYPLINEGAKIL 613
Query: 479 AEGIAVKAADLDIASVMGMGFP 500
EGIA +A+D+D+ V G GFP
Sbjct: 614 EEGIAARASDIDVVWVNGYGFP 635
>gi|403519024|ref|YP_006653157.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
domain-containing protein [Burkholderia pseudomallei
BPC006]
gi|403074666|gb|AFR16246.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
domain-containing protein [Burkholderia pseudomallei
BPC006]
Length = 692
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 270/507 (53%), Gaps = 17/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL DA V + L V+ AR+ H R + +
Sbjct: 150 MIVSGAPVPSEQLAKSGLFDAFVEGDLLEAAVAFARKAGAASGPHPRVRDREIVHEN--- 206
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + A + P CID +EAGV+ G GL E + F L+++
Sbjct: 207 ----AAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPE 262
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L H FF +R K+ V A R ++ VA++G G MG GI + + PV L E
Sbjct: 263 SCALRHAFFGERAAGKIADVP-ADTAVRGIESVAVIGAGTMGGGITMNFLNAGLPVTLLE 321
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ LE G+ +R N ++V KGK+TQEK + ++LL L Y+ KD D+VIEA+ E
Sbjct: 322 TKQEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEE 381
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+
Sbjct: 382 LGVKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEV 441
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G I
Sbjct: 442 VRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQI 501
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 502 DRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTG 560
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y R+A P V + I S GVA ++ + +IVE + + +VNE +
Sbjct: 561 AGWYDYVPGERRAKPSKLVDEMIVAYSSERGVA----RRQIGDAEIVERLVYALVNEGAK 616
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E IA KA+D+D+ + G GFP +R
Sbjct: 617 ILEEKIASKASDIDMVYLTGYGFPLWR 643
>gi|94310793|ref|YP_584003.1| multifunctional 3-hydroxybutyryl-CoA epimerase
/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
dehydrogenase [Cupriavidus metallidurans CH34]
gi|430809384|ref|ZP_19436499.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
gi|93354645|gb|ABF08734.1| fused 3-hydroxybutyryl-CoA epimerase and
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase and
enoyl-CoA hydratase ; 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus metallidurans CH34]
gi|429498193|gb|EKZ96707.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
Length = 693
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 253/444 (56%), Gaps = 10/444 (2%)
Query: 62 AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGP-RAGLQKEAEDFQKLLRSETCKS 120
A FAR A N P+ C+D V A + P AGL+ E + F L+ + ++
Sbjct: 209 AEGFLAFARNTVAAVAKNFPAPLKCVDAVAASLK--PFEAGLKDERDGFMYLVGTPESRA 266
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H FF +R SK+P V + G R++++VA++G G MG GI + + PV + E+ +
Sbjct: 267 LRHAFFGERAASKIPDVPE-GTPVRKIERVAVIGAGTMGGGITMNFLNAGIPVTMLEMKQ 325
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ LE G+ +R N ++ KKGK+TQEK E+ + LLT + Y+ K+ D+VIEA+ E + +
Sbjct: 326 EALERGVATIRRNYENSAKKGKLTQEKVEQRMGLLTTTMSYDDIKNADLVIEAVFEEMGV 385
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F L++ ILASNTST+D+N I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 KETVFKKLDEVMKDGAILASNTSTLDVNKIASFTRRPQDVVGMHFFSPANVMKLLEVVRG 445
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T V+ ++ IGKKIKKT +V G C GF NRM Y++ A L++ G +D+A
Sbjct: 446 EKTGKDVLATVMQIGKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDKA 505
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I KFG MGPFR+ DL G + A + + P+ Y S + E R G+ T G+
Sbjct: 506 IEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIQY-SKTADKLCEMGRFGQKTGAGW 564
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y RK P+ +V I + G+ K+S+++IVE + F +VNE ++
Sbjct: 565 YDYKAGDRKPYPNKQVNDMIVEHSKELGIT----RRKISDEEIVERLVFALVNEGAKILE 620
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP +R
Sbjct: 621 EGIASKASDIDMVYLTGYGFPLFR 644
>gi|374572763|ref|ZP_09645859.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM471]
gi|374421084|gb|EHR00617.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM471]
Length = 698
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 275/504 (54%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EA GL++ +V + + +L +RP KI
Sbjct: 152 MIVGGDPIGAAEALKNGLIEEIV--EGPAAGGEAFVRKLLAEKRPLRRLRDDDSKIAAAR 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K++ L P D V + GL+KE E F KL+ S+ K+
Sbjct: 210 ADRSIFTNAVAAMTKKSRGLEAPFAAADAVGYAIDLPFDEGLKKEREGFLKLVASDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R SK+ GV + G PR V +VAILG G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREASKIAGVPE-GTKPRPVNRVAILGAGTMGGGIAMSFANAGVPVTLIETGE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+ GV+ E+ D D+VIEA+ E +++
Sbjct: 329 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALINGVVGIENVGDADLVIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L++Y P +LASNTS ++++ I + T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFGKLDQYVKPGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRA 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++T+P +V ++I +KI K P VVG C GF NRM + + L+ G +D
Sbjct: 449 DKTAPDALVTAVNIARKIAKVPAVVGVCDGFVGNRMLAQRGKQSEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R A PDPEV+K I++ + + K +S+ +I+E + +P++NE ++
Sbjct: 562 YKYEAGSRSALPDPEVEKLIDETL----LRLGRKKRVVSDDEILERMMYPMINEGAKILE 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ + G G+P YR
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYR 641
>gi|418531196|ref|ZP_13097113.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
ATCC 11996]
gi|371451698|gb|EHN64733.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
ATCC 11996]
Length = 699
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 259/449 (57%), Gaps = 11/449 (2%)
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P GEA F+FA + + N P+ C++ V+ G+ E E F +L+ +
Sbjct: 210 HPQGEA--YFEFAATMVQGMSKNFPAPLRCLEAVKNATTKKFDDGMVAEREAFMQLMMTP 267
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAP-RRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+SL H+F A+R SK+P V G P R ++ V ++G G MG GI+ + + PV +
Sbjct: 268 ESRSLRHLFMAERAASKIPDVP--GDTPVREIRTVGVIGAGTMGGGISMNFLNAGIPVTI 325
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E ++ L+ G+ +R N +++VKKGK++++K+E+ + LL+ L+Y K+ D++IEA+
Sbjct: 326 LETKQEALDRGVATIRKNYEAQVKKGKLSEQKYEQRMGLLSTTLNYGDLKNADLIIEAVF 385
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +K+Q+F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LL
Sbjct: 386 EELGVKEQVFKQLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLL 445
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR T+ V+ ++ +GKKIKKT +V G C GF NRM Y++ A L++ G
Sbjct: 446 EVVRGKATAKDVLATVMKVGKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGASPQ 505
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+AI KFG MGPFR+ DL G + A + P+ Y S + E R G+
Sbjct: 506 QVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRYVEKPDMKY-SASADRLCELGRFGQK 564
Query: 416 TRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T G+Y Y +R A P V K I++ R G I P+ K+S+++IV+ + + +VNE
Sbjct: 565 TGAGWYDYVPGKRDAIPSEVVAKMIDEHRKSLG--ITPR--KISDEEIVQRLVYALVNEG 620
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ +GIA K+ D+D+ + G GFP +R
Sbjct: 621 AHILEDGIASKSGDIDMVYLTGYGFPLWR 649
>gi|386400122|ref|ZP_10084900.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM1253]
gi|385740748|gb|EIG60944.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM1253]
Length = 698
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 274/504 (54%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EA GL++ +V + + +L +RP KI
Sbjct: 152 MIVGGDPIGAAEALKNGLIEEIV--EGPAAGGEAFVRKLLAEKRPLRRLRDDDSKIAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K++ L P D V + GL+KE E F KL+ S+ K+
Sbjct: 210 ADRSIFTNAVAAMTKKSRGLEAPFAAADAVGYAIDLPFDEGLKKEREGFLKLVASDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R SK+ GV + G PR V +VAILG G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREASKIAGVPE-GTKPRPVNRVAILGAGTMGGGIAMSFANAGVPVTLIETGE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+ GV+ E+ D D+VIEA+ E +++
Sbjct: 329 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALINGVVGIENVGDADLVIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L++Y P +LASNTS ++++ I + T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFGKLDQYVKPGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRA 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++T+P +V + I +KI K P VVG C GF NRM + + L+ G +D
Sbjct: 449 DKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQSEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R A PDPEV+K I++ + + K +S+ +I+E + +P++NE ++
Sbjct: 562 YKYEAGSRSALPDPEVEKLIDETL----LRLGRKKRVVSDDEILERMMYPMINEGAKILE 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ + G G+P YR
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYR 641
>gi|452752262|ref|ZP_21952005.1| Enoyl-CoA hydratase [alpha proteobacterium JLT2015]
gi|451960338|gb|EMD82751.1| Enoyl-CoA hydratase [alpha proteobacterium JLT2015]
Length = 685
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 171/505 (33%), Positives = 277/505 (54%), Gaps = 19/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILE-HRRPWVATLYKTDKIEPL 59
M++ +P+ EA +GLVD + + L + A +A + + P AT +TD++
Sbjct: 152 MIVFGRPIGAGEAEKIGLVDTLAGEDSLEADAIAFAREKAKADSHP--ATSRRTDRLPDA 209
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+IF +A+ ++ P C+ V A G++ E E+F KL++ + K
Sbjct: 210 AHIGQIFDDFKAKNGRKMRGFDAPAACMRCVRAAAELPYVEGVKVEREEFMKLMQGDQSK 269
Query: 120 SLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+ H+FFA+R +K+ V D L P ++KV I+G G MG GIA + + PV + E+
Sbjct: 270 AQRHLFFAERQAAKIDDVPKDTPLIP--IRKVGIIGAGTMGGGIAMNFLSAGIPVTMLEM 327
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
++ L+ G G + N + VK+G+M++EK + + LL+ LDY D D+VIEA+ E++
Sbjct: 328 KQEALDRGTGVMGKNYEGNVKRGRMSEEKAKAAMDLLSTTLDYADLADCDLVIEAVFESM 387
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+ +F L+ + ILASNTS ++++ I + T +VG HFFSPA+VM LLE+V
Sbjct: 388 DVKKDVFGKLDAHVKDGAILASNTSYLNVDEIAQATKRPGYVVGMHFFSPANVMKLLEVV 447
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +T P V+ ++ + KKI K +V G C GF NRM P + A L+ G + ID
Sbjct: 448 RGAETRPDVLATVMALSKKIGKVAVVAGVCHGFIGNRMLSPRQREANKLIMEGATPWQID 507
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+ +FGMPMGPF+++DL G + IE+ + + D+R G+ T
Sbjct: 508 KVHQEFGMPMGPFQMSDLAGLDIGWHRDTNRIESLRDE--------LCAMDRR-GQKTGA 558
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY YDE R+ +P V+ I K G P+ ++S+++I E +P+VNE +
Sbjct: 559 GFYDYDENRRGTPSDTVEALIRKWAEKEGT---PQ-REISDEEIRERTLYPMVNEGALIL 614
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EG+A +A+D+D+ + G G+P YR
Sbjct: 615 EEGMAQRASDIDVVWIYGYGWPRYR 639
>gi|407699845|ref|YP_006824632.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Black
Sea 11']
gi|407248992|gb|AFT78177.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Black
Sea 11']
Length = 707
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 164/469 (34%), Positives = 251/469 (53%), Gaps = 5/469 (1%)
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E + +F AQ +K A P+ CI+ V GL+ E + F + + + ++
Sbjct: 212 ETQAVFDAVTAQTKKAARGFFAPLKCIEAVRGAYTLAFEDGLKNEGKLFMECMNTPQARA 271
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
H FFA+R V D R ++KVAI+G G MG GIA + PV + E+ E
Sbjct: 272 QQHFFFAERAAGHVSDF-DKNTPERNIEKVAIIGAGTMGGGIAMNFANAGIPVTMLELKE 330
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ LE G+ +R N ++ KKGK+TQE+ E ++LL+G Y+ DVD+VIEA+ E + +
Sbjct: 331 EALEKGLALIRKNYENSAKKGKLTQEQVESRMALLSGTTSYDDLADVDLVIEAVFEKMEV 390
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F+ L+K C P ILASNTST+D++ I T + ++G HFFSPA+VM LLE+V+
Sbjct: 391 KKTVFSTLDKVCKPGAILASNTSTLDIDEIATATSRPEDVIGLHFFSPANVMRLLEVVKA 450
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS +VI + + K+IKK ++VG C GF NRM PY + A LV G +DR
Sbjct: 451 EKTSAEVIKTCMKMAKRIKKVAVLVGVCFGFVGNRMIEPYGREANRLVLEGATPEQVDRV 510
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+T+FGMPMGPF + D+ G + E+ + + E R G +G
Sbjct: 511 LTEFGMPMGPFTMGDMAGLDIGYYVRQSRQEHIAHDPAYGAVADRLVEKGRNGLKAGRGV 570
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R PDPEV + ++ GV + + +S+++I+ + + ++NE +
Sbjct: 571 YNYEPGSRVPIPDPEVLEIAKQEAERLGVV---QRSDISDEEILVRVMYSLINEGAAILE 627
Query: 480 EGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCYFDQ 528
EGIA K++D+D+ V G GFP YR + + L Y DQ
Sbjct: 628 EGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEVGLGTILDKLTTYRDQ 676
>gi|295676535|ref|YP_003605059.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
gi|295436378|gb|ADG15548.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
Length = 696
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 190/506 (37%), Positives = 276/506 (54%), Gaps = 13/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA-PNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
M+++ PV E+ GL D VVA P +L A +A + P + KIE
Sbjct: 152 MIVSGTPVLSEKLADSGLFDEVVANPAELAEAALAFARKVGAQAGPHPKV--RDRKIEHP 209
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
A I +FAR A N P CID VEAGV G GL E E F L+++
Sbjct: 210 NAAGFI-QFARNSVAAIAKNFPAPHKCIDAVEAGVKDGFDKGLAFERECFIALVQTPESH 268
Query: 120 SLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+L H FF +R SK+P V +D + R + +VA++G G MG GIA + + PV L E
Sbjct: 269 ALRHAFFGERAASKIPDVPSDTSV--RDINQVAVIGAGTMGGGIAMNFLNAGIPVTLLET 326
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
++ L+ G+ +R N ++ V KGK+ E E+ ++LL+ L Y+ K DM+IEA+ E +
Sbjct: 327 KQEALDRGVATIRKNYEATVTKGKLKPEVMEQRLALLSPTLSYDDLKHADMIIEAVFEEL 386
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+Q+F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+V
Sbjct: 387 GVKEQVFGRLDEVAKPGAILASNTSTLDVDRIAAFTKRPQDVVGMHFFSPANVMKLLEVV 446
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +D
Sbjct: 447 RGKETAKDVLATVMKLAKKIRKTAVVSGVCDGFIGNRMIEQYLRQALFMLEEGALPAQVD 506
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+AI KFG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 507 KAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEHPDMHY-SKIADRLCEMGRFGQKTGG 565
Query: 419 GFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y R A P V + I + + + K+S+ +IVE + F +VNE ++
Sbjct: 566 GWYDYKAGDRTAYPSGAVNEMIVEYSKET----HSERRKISDDEIVERLVFALVNEGAKI 621
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP YR
Sbjct: 622 LEEGIASKASDIDMVYLTGYGFPLYR 647
>gi|126453618|ref|YP_001066597.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
domain-containing protein [Burkholderia pseudomallei
1106a]
gi|167845292|ref|ZP_02470800.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
B7210]
gi|242316511|ref|ZP_04815527.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1106b]
gi|254198130|ref|ZP_04904552.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
S13]
gi|254297334|ref|ZP_04964787.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
406e]
gi|126227260|gb|ABN90800.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1106a]
gi|157808034|gb|EDO85204.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
406e]
gi|169654871|gb|EDS87564.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
S13]
gi|242139750|gb|EES26152.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1106b]
Length = 694
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 270/507 (53%), Gaps = 17/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+++ PV E+ GL DA V + L V+ AR+ H R + +
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGDLLEAAVAFARKAGAASGPHPRVRDREIVHEN--- 208
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A +FAR + A + P CID +EAGV+ G GL E + F L+++
Sbjct: 209 ----AAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPE 264
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L H FF +R K+ V A R ++ VA++G G MG GI + + PV L E
Sbjct: 265 SCALRHAFFGERAAGKIADVP-ADTAVRGIESVAVIGAGTMGGGITMNFLNAGLPVTLLE 323
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ LE G+ +R N ++V KGK+TQEK + ++LL L Y+ KD D+VIEA+ E
Sbjct: 324 TKQEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEE 383
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+
Sbjct: 384 LGVKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEV 443
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G I
Sbjct: 444 VRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQI 503
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI FG MGPFR++DL G + A + P+ Y S I + E R G+ T
Sbjct: 504 DRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTG 562
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y R+A P V + I S GVA ++ + +IVE + + +VNE +
Sbjct: 563 AGWYDYVPGERRAKPSKLVDEMIVAYSSERGVA----RRQIGDAEIVERLVYALVNEGAK 618
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E IA KA+D+D+ + G GFP +R
Sbjct: 619 ILEEKIASKASDIDMVYLTGYGFPLWR 645
>gi|312115608|ref|YP_004013204.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Rhodomicrobium
vannielii ATCC 17100]
gi|311220737|gb|ADP72105.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rhodomicrobium
vannielii ATCC 17100]
Length = 695
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 171/505 (33%), Positives = 275/505 (54%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++++ V +A ++GLVD VV + L + + P L + KI P
Sbjct: 153 IIISGDLVPAVKAKTIGLVDEVVDGDILPAAIALAKSKSFLSKHPKTREL--SAKIAP-D 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+F+ R + R++ P C+D +E+ V GL++E E F + L + K+
Sbjct: 210 RGSHLFEGRRDELRRRQPFQHAQFRCVDAIESAVHLPFSQGLKRERELFNEALDDDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L+H FFA+R +K+PG TD+ PR +K VA++G G MG GIA A + +PVI+ + +
Sbjct: 270 LIHAFFAEREAAKIPGFRTDV--RPREIKSVAVVGSGHMGGGIAMAFANAGFPVIVLDRD 327
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L G+ V N +S V++G++ Q K +S + ++Y+ DVD+V+EA E++
Sbjct: 328 QAALSRGLAVVAKNYESMVRRGRLDQPGMNKRLSAIRSTVNYKDLADVDLVVEAAFEDIG 387
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F DL++ C I ASNTST+D++ I T ++G HFFSPA+V L+E+VR
Sbjct: 388 VKEQVFRDLDRACKKGAIFASNTSTLDIDEIASFTRRPGDVIGTHFFSPANVQRLVEVVR 447
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+TS V+ + + KKI K + VGNC GFA NRM Y A +++E G +D
Sbjct: 448 GKETSADVLATAMAVAKKIGKIGVAVGNCDGFAGNRMLEKYVTEAMIILEEGATPAEVDT 507
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
A+T++G+ MGPF + DL G V + ++ + Y S ++ + R G+ T KG
Sbjct: 508 ALTRWGLAMGPFAVFDLTGIDVNWHIRQRRLKQ--GKPYGSALLDRFYDAGRFGQKTGKG 565
Query: 420 FYLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
FY Y+ +A PDPE IE R G P+ +SE++IV+ + +VNE +
Sbjct: 566 FYRYETGSRAPLPDPEADAIIEAYRREVG----PRVKSVSEQEIVKRTIYALVNEGANIL 621
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EG+ ++ D+D + G GFP +R
Sbjct: 622 DEGVVYRSGDIDTIYINGYGFPAWR 646
>gi|338972995|ref|ZP_08628365.1| enoyl-CoA hydratase [Bradyrhizobiaceae bacterium SG-6C]
gi|338233748|gb|EGP08868.1| enoyl-CoA hydratase [Bradyrhizobiaceae bacterium SG-6C]
Length = 695
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 278/504 (55%), Gaps = 14/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ +P+ ++A GL++ +V V +A I+ +RP K+
Sbjct: 152 MIVGGEPISAQDALKNGLIEEIVDAPPAVG-GESFARKIVAEKRPLRRLRDDDSKLAAAK 210
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A A K++ L P+ + V + L+ E E F KL+ + K+
Sbjct: 211 ADRSIFTNAAAAANKRSRGLEAPVTAAEAVSHSLDQPFDQALKTERELFLKLMNGDQSKA 270
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +K+ GV D G R VK+VA++G G MG GIA + + PV + E+ +
Sbjct: 271 QRYAFFAERAAAKIDGVPD-GTKGREVKQVAVIGAGTMGGGIAMSFANAGIPVTIIEMAD 329
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K + L+ G + E+ KD D++IEA+ E + +
Sbjct: 330 EPLKRGLGIMQKNYEATAARGGIPADAPAKRMGLIKGAVGLENVKDADLIIEAVFETMEI 389
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L+++ P +LASNTS +D+N I + T ++G HFFSPA+VM L EIVR
Sbjct: 390 KKEVFTKLDQFAKPGAVLASNTSYLDINKIADVTKRPQDVLGMHFFSPANVMKLCEIVRG 449
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P +V ++I KKI K P+VVG C GF NRM ++ + + G +D
Sbjct: 450 AKTAPDALVTAVNIAKKIAKVPVVVGVCDGFVGNRMLAARSKQSEKFLFEGALPQQVDAV 509
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 510 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 562
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y++ R PDPEV+K I++ + G+ K ++S+++I+E + +P++NE R+
Sbjct: 563 YRYEQGSRSPLPDPEVEKLIDETLAKLGL----KRREISDEEILERMVYPMINEGARILE 618
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA + +D+D+ + G G+P YR
Sbjct: 619 EKIAARPSDIDVVWLYGYGWPIYR 642
>gi|91783541|ref|YP_558747.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia xenovorans LB400]
gi|91687495|gb|ABE30695.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia xenovorans LB400]
Length = 694
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 184/505 (36%), Positives = 276/505 (54%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV E+ GL D + A L A +A + P + +IE
Sbjct: 152 MIVSGTPVMSEKLADSGLFDEL-AQGDLAEAALAFARKVGAKEGPH--PKLRDRRIEHPN 208
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A I +FAR A + P CID VEAGV +G GL E E F L+++ ++
Sbjct: 209 AAGFI-QFARNSVAAVAKHFPAPHKCIDAVEAGVQNGFDKGLAFERECFIALVQTPESRA 267
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H FF +R SK+P V +D + R + +VA++G G MG GIA I + PV L E
Sbjct: 268 LRHAFFGERAASKIPDVPSDTPV--RDINQVAVIGAGTMGGGIAMNFINAGIPVTLLETR 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+ +R N ++ V+KGK+ E E+ ++L+T L Y+ K+ D+++EA+ E +
Sbjct: 326 QEALDRGLATIRKNYEASVRKGKLKPEALEQRMALITPTLSYDDLKNADLIVEAVFEELD 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L++ ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRRLDEVAKQGAILASNTSTLDVDRIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+T+ V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G +DR
Sbjct: 446 GRETAKDVLATVMKLAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI KFG MGPFR++DL G + A + + P+ Y S I + E R G+ T G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEHPDMHY-SKIADRLCETGRFGQKTGGG 564
Query: 420 FYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y R A P V I + + K+S+++IVE + F +VNE ++
Sbjct: 565 WYDYKAGDRTAYPSKVVDDMIVAFSKEA----NAGRRKISDEEIVERLVFSLVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP YR
Sbjct: 621 EEGIASKASDIDMVYLAGYGFPLYR 645
>gi|170747490|ref|YP_001753750.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium
radiotolerans JCM 2831]
gi|170654012|gb|ACB23067.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium
radiotolerans JCM 2831]
Length = 680
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 180/509 (35%), Positives = 278/509 (54%), Gaps = 27/509 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATL----YKTDKI 56
MMLT +PV E+A +LG+VDAVV LV+ AR AL++ + TL ++DK+
Sbjct: 140 MMLTGEPVSAEKAAALGIVDAVVL-GDLVAEARTRALELAD-----AGTLPRVRDRSDKL 193
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P EARE F+ +A K+ P+ T+ V AG+ A + E +F+ L+
Sbjct: 194 TP--EARERFEAQATEAVKRDPDATNVHALARAVRAGLEQDFDAAVAVERAEFRALVEDP 251
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRR-VKKVAILGGGLMGSGIATALILSNYPVIL 175
K+L + FFA+R ++VPG+ PRR ++ A++G G MG GIA + PV +
Sbjct: 252 RSKALRYAFFAEREAARVPGLPKD--TPRRPIRTAAVIGAGTMGGGIAMCFANAGIPVTV 309
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E E L G+ RV+A K+G +T+ + E+ + +TG + E ++ D+V+EA
Sbjct: 310 IETEEGALTRGLDRVKALYAGSAKRGSITEAQREERVGRITGAIGLEHAREADIVVEAAF 369
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E++ +K+ IF++L++ P ILA+NTS +D+N I T ++G HFFSPA+VM L+
Sbjct: 370 EDMGVKRGIFSELDQIAKPGAILATNTSYLDVNAIAAVTNRPQDVLGLHFFSPANVMRLV 429
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR +T+P+V+ LD+GK++ K P+ VG C GF NRM ++A L+ G +
Sbjct: 430 EVVRAEKTAPEVLATALDLGKRLNKLPVAVGVCFGFVGNRMLERRSRAGERLLLEGALPH 489
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D A+T FG MGPF + DL G + + F P + + E R G+
Sbjct: 490 EVDAAVTGFGFRMGPFAMGDLAGLDIGWRSRKDFGGRAP-------VADSLAEQGRFGQK 542
Query: 416 TRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T +GFYLY D R + DPEV+ I + + GVA + IV + +P+VNE
Sbjct: 543 TGRGFYLYPDGARTGTRDPEVEALIARVAAEHGVA----RRSFTADAIVARLMYPMVNEG 598
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ EGIA + D+D + G +P +R
Sbjct: 599 ARILEEGIAARPGDIDTIWINGYNWPAWR 627
>gi|398846806|ref|ZP_10603760.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
gi|398252208|gb|EJN37411.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
Length = 701
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 268/506 (52%), Gaps = 15/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQ-LVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
MML+ P+ + +LGL+D + P Q ++ A +A D+L AT PL
Sbjct: 154 MMLSGDPIDARQGLALGLIDRLPEPGQDMLELACAFARDLLAQPTAPAATPI------PL 207
Query: 60 --GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
G A + F AQ + P P+ + V A GL +E F++ L+
Sbjct: 208 ADGLASDFFASREAQLVARKPGQRAPLRVLAAVRAACELPLAEGLAQEQALFREALQDPQ 267
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L H FFA+R +VPG+ D R + VA++G G MG+GIA I + PV L E
Sbjct: 268 ATALRHQFFAEREALRVPGI-DANTTLRNIANVAVIGAGTMGAGIAMNFINAGIPVRLLE 326
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + L+ G+ ++R N +S +K+GK+T E+ E+ +SLL G LDY D D+VIEA+ E+
Sbjct: 327 LKPEALDRGLAQIRKNYESSIKRGKLTPEQLEQRMSLLQGTLDYADLADADLVIEAVFED 386
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+S+KQQ+F L++ C P ILASNTST+D++ I T +VG HFFSPA+VM LLE+
Sbjct: 387 LSIKQQVFRTLDRVCKPGAILASNTSTLDVDRIAGCTQRPQDVVGLHFFSPANVMRLLEV 446
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+P V+ L I K+I K P+V G C GF NRM PY + A LV G +
Sbjct: 447 VRGRATAPDVLATTLKIAKRIGKLPVVSGVCFGFIGNRMLEPYGREAHRLVLEGASPAQV 506
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+ +T G+ MG F + DL G V + + R G+ +
Sbjct: 507 DKVLTGLGLAMGVFAMYDLAGIDVGYLVRQSRRSEIAHDPSYFRLADELYHLGRHGQKSG 566
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
+GFY Y+ R + DPEV++ + + G+ P +S+ +I + F ++NE ++
Sbjct: 567 RGFYRYEGRERIE-DPEVEQIAAQLAAKLGIIRRP----ISDAEIHDRCLFMLINEGLQL 621
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA+++ D+D+ G GFP +R
Sbjct: 622 LDEGIALRSGDIDLVWTNGYGFPAWR 647
>gi|430808528|ref|ZP_19435643.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
gi|429499103|gb|EKZ97555.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
Length = 696
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/457 (37%), Positives = 252/457 (55%), Gaps = 27/457 (5%)
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P GE+ +FAR +QA P+ ++ V A + G++ E E F L+ S
Sbjct: 208 HPQGES--FLQFARNSVAQQAKGQIAPMKALEAVAASLTKSFDEGMRVEREGFMSLMASP 265
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDL--GLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L HIF A+ SK+ DL G R ++KV ++G G MG GI + + PV+
Sbjct: 266 ESRALRHIFKAEHAASKI---ADLPAGTPLREIRKVGVIGAGTMGGGITMNFLNAGIPVV 322
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
L E+ ++ L+ G+ +R N ++ +KKGK+ E+ E+ ++L+TG L Y DVD+VIEA+
Sbjct: 323 LLEMKQEALDKGLATIRRNYENSMKKGKLKPEQLEQRMALITGTLSYADLSDVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
EN+ +K+ +F L+K C ILASNTS ++L+ I T ++G HFFSPA+VM L
Sbjct: 383 FENMDVKKTVFETLDKTCKAGAILASNTSYLNLDRIASFTKRPTDVIGLHFFSPANVMRL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LEIVR QT+P V+ + + KKIKK +V G C GF NRM Y AA L+ G
Sbjct: 443 LEIVRGAQTAPDVLATCMALAKKIKKIAVVSGVCDGFIGNRMLARYGAAAGALINAGALP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI-------MQ 407
ID A+ KFGM MGP+R+ DL G + AT +R +P+ +
Sbjct: 503 QQIDGALQKFGMAMGPYRMGDLAGLDIGYAT--------RKRKAAEAGVPLRPSVADKLA 554
Query: 408 EDKRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMI 466
E R G+ T G+Y Y+ R PDP + I + RS G I P+ +S++++VE
Sbjct: 555 EAGRLGQKTGAGWYRYEAGNRDPIPDPATETLIAEFRSAQG--ITPR--AISDEEVVERC 610
Query: 467 FFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
F +VNE R+ EGIA +A+DLD+ + G GFP R
Sbjct: 611 IFALVNEGARILEEGIAARASDLDVVYLNGYGFPRLR 647
>gi|264679089|ref|YP_003278996.1| 3-hydroxyacyl-CoA dehydrogenase [Comamonas testosteroni CNB-2]
gi|262209602|gb|ACY33700.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni CNB-2]
Length = 699
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 167/449 (37%), Positives = 263/449 (58%), Gaps = 13/449 (2%)
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
P GEA F+FA + + N P+ C++ V+ G+ E E F +L+ +
Sbjct: 211 PQGEA--YFEFAATMVQGMSKNFPAPLRCLEAVKNATTKKFDDGMVAEREAFMQLMMTPE 268
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAP-RRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL H+F A+R SK+P V G P R + V ++G G MG GI+ + + PV +
Sbjct: 269 SRSLRHLFMAERAASKIPDVP--GDTPVREIWTVGVIGAGTMGGGISMNFLNAGIPVTIL 326
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E ++ L+ G+ +R N +++VKKGK++++K+E+ ++LL+ L+Y K+ D++IEA+ E
Sbjct: 327 ETKQEALDRGVATIRKNYEAQVKKGKLSEQKYEQRMALLSTTLNYGDLKNADLIIEAVFE 386
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+Q+F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE
Sbjct: 387 ELGVKEQVFKQLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLE 446
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR T+ V+ ++ +GKKIKKT +V G C GF NRM Y++ A L++ G
Sbjct: 447 VVRGKATAKDVLATVMKVGKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGASPQQ 506
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+AI KFG MGPFR+ DL G + A ++IE P+ Y S + E R G+
Sbjct: 507 VDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRYIEK-PDMKY-SASADRLCELGRFGQK 564
Query: 416 TRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T G+Y Y +R A P V K I++ R G I P+ K+S+++IV+ + + +VNE
Sbjct: 565 TGAGWYDYVPGKRDAIPSEVVAKMIDEHRKSLG--ITPR--KISDEEIVQRLVYALVNEG 620
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ +GIA K+ D+D+ + G GFP +R
Sbjct: 621 AQILEDGIASKSGDIDMVYLTGYGFPLWR 649
>gi|73541099|ref|YP_295619.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
gi|72118512|gb|AAZ60775.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
Length = 693
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/438 (38%), Positives = 255/438 (58%), Gaps = 10/438 (2%)
Query: 68 FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFA 127
FA+ A N P+ C++ V AG + GL++E + F L+ + ++L H FF
Sbjct: 215 FAKTTVGAMAKNFPAPLKCLEAV-AGSLKPFEQGLKEERDGFLYLVTTPESRALRHAFFG 273
Query: 128 QRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAG 186
+R SK+P V +D L R+++K+A++G G MG GI+ + + PV + E ++ L+ G
Sbjct: 274 ERAASKIPDVPSDTPL--RKIEKIAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRG 331
Query: 187 IGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFA 246
IG +R N ++ KKGK+TQEK E+ + LL+ L Y+ KD DMVIEA+ E + +K+ +F
Sbjct: 332 IGIIRKNYENSAKKGKLTQEKVEQRMGLLSTTLSYDDIKDADMVIEAVFEEMGVKEIVFK 391
Query: 247 DLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQ 306
L++ ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR +T
Sbjct: 392 KLDEVMKQGAILASNTSTLDVDKIASFTKRPQDVVGMHFFSPANVMKLLEVVRGAKTGKD 451
Query: 307 VIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGM 366
V+ ++ IGKKIKKT +V G C GF NRM Y++ A L++ G +DRAI KFG
Sbjct: 452 VLATVMAIGKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAIEKFGF 511
Query: 367 PMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE- 425
MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+Y Y
Sbjct: 512 AMGPFRMGDLAGNDIGWAIRKRRAVDKPDIQY-SKTADLLCEMGRYGQKTGAGWYDYKAG 570
Query: 426 RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVK 485
RK P+ +V I + G+ K+S+++IVE + F +VNE ++ EGIA K
Sbjct: 571 DRKPYPNQQVNDMIVQHSKDLGIT----RRKISDEEIVERLVFALVNEGAKILEEGIASK 626
Query: 486 AADLDIASVMGMGFPPYR 503
A+D+D+ + G GFP +R
Sbjct: 627 ASDIDMVYLTGYGFPLFR 644
>gi|414170055|ref|ZP_11425669.1| hypothetical protein HMPREF9696_03524 [Afipia clevelandensis ATCC
49720]
gi|410884727|gb|EKS32547.1| hypothetical protein HMPREF9696_03524 [Afipia clevelandensis ATCC
49720]
Length = 695
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 278/504 (55%), Gaps = 14/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ +P+ ++A GL++ +V V +A I+ +RP K+
Sbjct: 152 MIVGGEPISAQDALKNGLIEEIVDAPPAVG-GESFARKIVAEKRPLRRLRDDDSKLAAAK 210
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A A K++ L P+ + V + L+ E E F KL+ + K+
Sbjct: 211 ADRSIFTNAAAAANKRSRGLEAPVTAAEAVSHSLDQPFDQALKTERELFLKLMNGDQSKA 270
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +K+ GV D G R VK+VA++G G MG GIA + + PV + E+ +
Sbjct: 271 QRYAFFAERAAAKIDGVPD-GTKGREVKQVAVIGAGTMGGGIAMSFANAGIPVTIIEMAD 329
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K + L+ G + E+ KD D++IEA+ E + +
Sbjct: 330 EPLKRGLGIMQKNYEATAARGGIPADAPAKRMGLIKGAVGLENVKDADLIIEAVFETMEI 389
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L+++ P +LASNTS +D+N I + T ++G HFFSPA+VM L EIVR
Sbjct: 390 KKEVFTKLDQFAKPGAVLASNTSYLDINKIADVTKRPQDVLGMHFFSPANVMKLCEIVRG 449
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P +V ++I KKI K P+VVG C GF NRM ++ + + G +D
Sbjct: 450 AKTAPDALVTAVNIAKKIAKVPVVVGVCDGFVGNRMLAARSKQSEKFLFEGALPQQVDAV 509
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 510 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 562
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y++ R PDPEV+K I++ + G+ K ++S+++I+E + +P++NE R+
Sbjct: 563 YKYEQGSRSPLPDPEVEKLIDETLAKLGL----KRREISDEEILERMVYPMINEGARILE 618
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA + +D+D+ + G G+P YR
Sbjct: 619 EKIAARPSDIDVVWLYGYGWPIYR 642
>gi|429218881|ref|YP_007180525.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus peraridilitoris DSM
19664]
gi|429129744|gb|AFZ66759.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus peraridilitoris DSM
19664]
Length = 703
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 179/505 (35%), Positives = 282/505 (55%), Gaps = 14/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKT-DKIEPL 59
M++T P+ E+AH GL+D ++ L+ A Q+A R L K D+ L
Sbjct: 153 MIVTGNPISAEKAHEFGLIDELIE-GDLLEGAVQFA-----QRAGESGELPKIRDRDVKL 206
Query: 60 G-EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
A F A + RK+A L P++C++ V+ V GLQ+E E F + RS+
Sbjct: 207 DIPAHMFFNVATERVRKEARGLIAPLLCLEAVKGAVELPFDEGLQREGELFLQAQRSDQS 266
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+ L HIFFA+R +K+ GV D + PR ++ +LG G MG GIA + PV + E
Sbjct: 267 RGLRHIFFAEREAAKINGV-DRSVKPREIRSAGVLGAGTMGGGIAMNFANAGIPVTIYEA 325
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N + LE G+ +R N ++ KKG++T E+ E+ ++L+ G L +E D D VIEA+ E++
Sbjct: 326 NAENLERGLATIRRNYENTAKKGRLTLEQVEERMALIRGTLSFEDLADADYVIEAVFEDM 385
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
++K+++F L+ C P ILASNTST+D+N I T ++++G HFFSPA+VM LLEIV
Sbjct: 386 NVKREVFGRLDAVCKPGAILASNTSTLDVNEIARATSRPEQVLGMHFFSPANVMKLLEIV 445
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R ++ Q +V + + K + K +VVG C GF NRM Y + A +VE G +D
Sbjct: 446 RPDKVDDQTLVTSVQLAKTLGKVGVVVGVCDGFVGNRMINQYGREAQQMVEEGASPRQVD 505
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ G+PMGPF ++D+ G + A + + + + I+ E R G+ T
Sbjct: 506 DAMHALGLPMGPFEMSDMAGLDIGYAIRQRQAQEAGREKSDTFMDRIV-EAGRKGQKTGA 564
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
G Y Y R DP ++ I+ +R+ GV +P+ +L++++I + + + +VNE ++
Sbjct: 565 GVYSYANGRTPEVDPVAEQIIQDSRAEKGV--EPR--ELTQEEITKRLVYQLVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA +A+D+D+ V G GFP R
Sbjct: 621 EEGIAQRASDIDVIYVYGYGFPASR 645
>gi|406596554|ref|YP_006747684.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126]
gi|406373875|gb|AFS37130.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126]
Length = 707
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 250/469 (53%), Gaps = 5/469 (1%)
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E + +F AQ +K P+ CI+ V GL+ E + F + + + ++
Sbjct: 212 ETQAVFDAVTAQTKKATRGFFAPLKCIEAVRGAYTLAFEDGLKNEGKLFMECMNTPQARA 271
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
H FFA+R V D R + KVAI+G G MG GIA + PV + E+ E
Sbjct: 272 QQHFFFAERAAGHVSDF-DKNTPERNIDKVAIIGAGTMGGGIAMNFANAGIPVTMLELKE 330
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ LE G+ +R N ++ KKGK+TQE+ E ++LL+G Y+ DVD+VIEA+ E + +
Sbjct: 331 EALEKGLALIRKNYENSAKKGKLTQEQVESRMALLSGTTSYDDLADVDLVIEAVFEKMEV 390
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F+ L+K C P ILASNTST+D++ I T + ++G HFFSPA+VM LLE+V+
Sbjct: 391 KKTVFSTLDKVCKPGAILASNTSTLDIDEIATATSRPEDVIGLHFFSPANVMRLLEVVKA 450
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS +VI + + K+IKK ++VG C GF NRM PY + A L+ G +DR
Sbjct: 451 EKTSAEVIKTCMKMAKRIKKVAVLVGVCFGFVGNRMIEPYGREANRLLLEGATPEQVDRV 510
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+T+FGMPMGPF + D+ G + E+ + + E R G T +G
Sbjct: 511 LTEFGMPMGPFTMGDMAGLDIGYYVRQSRQEHIAHDPAYGAVADRLVEKGRNGLKTGRGA 570
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R PDPEV + ++ GV + + +S+++I+ + + ++NE +
Sbjct: 571 YNYEPGSRVPVPDPEVLEIAKQEAERLGVV---QRSDISDEEILVRVMYSLINEGAAILE 627
Query: 480 EGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCYFDQ 528
EGIA K++D+D+ V G GFP YR + + L Y DQ
Sbjct: 628 EGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEVGLGTILDKLTTYRDQ 676
>gi|407687498|ref|YP_006802671.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407290878|gb|AFT95190.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 707
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 250/469 (53%), Gaps = 5/469 (1%)
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E + +F AQ +K P+ CI+ V GL+ E + F + + + ++
Sbjct: 212 ETQAVFDAVTAQTKKATRGFFAPLKCIEAVRGAYTLAFEDGLKNEGKLFMECMNTPQARA 271
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
H FFA+R V D R + KVAI+G G MG GIA + PV + E+ E
Sbjct: 272 QQHFFFAERAAGHVSDF-DKNTPERNIDKVAIIGAGTMGGGIAMNFANAGIPVTMLELKE 330
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ LE G+ +R N ++ KKGK+TQE+ E ++LL+G Y+ DVD+VIEA+ E + +
Sbjct: 331 EALEKGLALIRKNYENSAKKGKLTQEQVESRMALLSGTTSYDDLADVDLVIEAVFEKMEV 390
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F+ L+K C P ILASNTST+D++ I T + ++G HFFSPA+VM LLE+V+
Sbjct: 391 KKTVFSTLDKVCKPGAILASNTSTLDIDEIATATSRPEDVIGLHFFSPANVMRLLEVVKA 450
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS +VI + + K+IKK ++VG C GF NRM PY + A L+ G +DR
Sbjct: 451 EKTSAEVIKTCMKMAKRIKKVAVLVGVCFGFVGNRMIEPYGREANRLLLEGATPEQVDRV 510
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+T+FGMPMGPF + D+ G + E+ + + E R G T +G
Sbjct: 511 LTEFGMPMGPFTMGDMAGLDIGYYVRQSRQEHIAHDPAYGAVADRLVEKGRNGLKTGRGA 570
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R PDPEV + ++ GV + + +S+++I+ + + ++NE +
Sbjct: 571 YNYEPGSRVPVPDPEVLEIAKQEAERLGVV---QRSDISDEEILVRVMYSLINEGAAILE 627
Query: 480 EGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCYFDQ 528
EGIA K++D+D+ V G GFP YR + + L Y DQ
Sbjct: 628 EGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEVGLGTILDKLTTYRDQ 676
>gi|407683514|ref|YP_006798688.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
'English Channel 673']
gi|407245125|gb|AFT74311.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
'English Channel 673']
Length = 707
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 250/469 (53%), Gaps = 5/469 (1%)
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E + +F AQ +K P+ CI+ V GL+ E + F + + + ++
Sbjct: 212 ETQAVFDAVTAQTKKATRGFFAPLKCIEAVRGAYTLAFEDGLKNEGKLFMECMNTPQARA 271
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
H FFA+R V D R + KVAI+G G MG GIA + PV + E+ E
Sbjct: 272 QQHFFFAERAAGHVSDF-DKNTPERNIDKVAIIGAGTMGGGIAMNFANAGIPVTMLELKE 330
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ LE G+ +R N ++ KKGK+TQE+ E ++LL+G Y+ DVD+VIEA+ E + +
Sbjct: 331 EALEKGLALIRKNYENSAKKGKLTQEQVESRMALLSGTTSYDDLADVDLVIEAVFEKMEV 390
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F+ L+K C P ILASNTST+D++ I T + ++G HFFSPA+VM LLE+V+
Sbjct: 391 KKTVFSTLDKVCKPGAILASNTSTLDIDEIATATSRPEDVIGLHFFSPANVMRLLEVVKA 450
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS +VI + + K+IKK ++VG C GF NRM PY + A L+ G +DR
Sbjct: 451 EKTSAEVIKTCMKMAKRIKKVAVLVGVCFGFVGNRMIEPYGREANRLLLEGATPEQVDRV 510
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+T+FGMPMGPF + D+ G + E+ + + E R G T +G
Sbjct: 511 LTEFGMPMGPFTMGDMAGLDIGYYVRQSRQEHIAHDPAYGAVADRLVEKGRNGLKTGRGA 570
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R PDPEV + ++ GV + + +S+++I+ + + ++NE +
Sbjct: 571 YNYEPGSRVPVPDPEVLEIAKQEAERLGVV---QRSDISDEEILVRVMYSLINEGAAILE 627
Query: 480 EGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCYFDQ 528
EGIA K++D+D+ V G GFP YR + + L Y DQ
Sbjct: 628 EGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEVGLGTILDKLTTYRDQ 676
>gi|333892777|ref|YP_004466652.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas sp. SN2]
gi|332992795|gb|AEF02850.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas sp. SN2]
Length = 706
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/477 (35%), Positives = 264/477 (55%), Gaps = 19/477 (3%)
Query: 39 ILEHRRPWVATLYKTDKIEPLG--------EAREIFKFARAQARKQAPNLTHPIVCIDVV 90
+LE + ++A+L + I+ E + +F AQ +K A P+ CI+ V
Sbjct: 182 LLEDTKQYLASLNAENCIKRTSDITLTMSEEVQGVFDAVTAQTKKAARGFFAPLKCIEAV 241
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
+ GL+ E + F + + + ++ H FFA+R V D R ++KV
Sbjct: 242 KGAYTLAFEDGLKHEGKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKSTPERSIEKV 300
Query: 151 AILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK 210
A++G G MG GIA + PV + E+ ++ L+ G+ +R N ++ KKGK+TQE+ E
Sbjct: 301 AVIGAGTMGGGIAMNFANAGIPVTMLELKQEALDKGLALIRKNYENSAKKGKLTQEQVET 360
Query: 211 TISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLI 270
++LL+G Y+ DVD+VIEA+ E + +K+ +F L+K C P ILASNTST+D+N I
Sbjct: 361 RMALLSGTTTYDDLADVDLVIEAVFEKMEVKKTVFTTLDKVCKPGAILASNTSTLDVNEI 420
Query: 271 GERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTG 330
T ++G HFFSPA+VM LLE+V+ TS VI + + K+IKK ++VG C G
Sbjct: 421 AACTSRPQDVIGLHFFSPANVMKLLEVVKAEDTSADVIKTCMKLAKRIKKVAVLVGVCFG 480
Query: 331 FAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAI---ATGM 387
F NRM PY + A L+ G +DR +T+FGMPMGPF + D+ G + +
Sbjct: 481 FVGNRMIEPYGREANRLLLEGASPEQVDRVLTQFGMPMGPFTMGDMAGLDIGYYVRQSRQ 540
Query: 388 QFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMS 446
FI + P TY ++ ++++D R G T +G YLY+ R PDPEV + ++ +
Sbjct: 541 AFISHDP--TYGAVADRLVEKD-RNGLKTGRGAYLYEAGSRVPIPDPEVLEIAKQEAARL 597
Query: 447 GVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
GV + +S+++I+ + ++NE + EGIA K++D+D+ V G GFP YR
Sbjct: 598 GVT---QRDDISDEEILVRCLYTLINEGACILEEGIAAKSSDIDVIYVYGYGFPVYR 651
>gi|381202863|ref|ZP_09909972.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Sphingobium yanoikuyae
XLDN2-5]
Length = 691
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/508 (36%), Positives = 265/508 (52%), Gaps = 24/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+M PV + A +GLVD + QL + A A +L+ RP L D+ E L
Sbjct: 154 LMTAGSPVSAKAAKGMGLVDELAVEGQLRADAIALAQRVLDEGRPL---LKVRDRTEKLD 210
Query: 61 EAR---EIF-KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
EAR EIF F +A ARK P I VEA + G+ E + F +L
Sbjct: 211 EARGKPEIFADFRKANARKFR-GFNAPEAIIRCVEASLDLPFDEGMTFERQLFNELQADS 269
Query: 117 TCKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+ H+FFA+R +KV + D + P + KV ++G G MG GIA + PV L
Sbjct: 270 QSAAQRHVFFAERQAAKVDSLPADTPILP--IAKVGVIGAGTMGGGIAMNFANAGIPVTL 327
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E NE L G+ +R N ++ KKGKM E + + LLTG + E D D++IEA+
Sbjct: 328 VETNEDALFRGLRIIRGNYETTAKKGKMKPEDVDTRMGLLTGSIAMEDLADCDLIIEAVF 387
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +K+++FA L++ P ILA+NTS +D++ I T D +VG HFFSPA+VM LL
Sbjct: 388 EQIDVKREVFAKLDRIAKPGAILATNTSYLDIDDIAAATSRPDSVVGLHFFSPANVMKLL 447
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VRT T P++I + + K I K ++VGN GF NR+ A L+ G +
Sbjct: 448 EVVRTKDTKPEIIATAMKLAKTIGKIGVLVGNGYGFVGNRILAARNTQADQLILEGATPW 507
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+ + FG MG F++ DLVG V P+ T + + I+ E R G+
Sbjct: 508 AVDKVLYDFGFAMGHFQMRDLVGLDVGWN---------PKTTSSANVREILNEMGRHGQK 558
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
T+ GFY YDE RK +P P + IE + G+ +S+ +I + I F +VNE
Sbjct: 559 TKGGFYDYDENRKQTPSPVAMQVIEDFAAKQGIT----RRDISDAEIQDRILFAMVNEGA 614
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ EGIA +A+D+DI + G G+P YR
Sbjct: 615 RILDEGIASRASDIDIVWITGYGWPKYR 642
>gi|83859319|ref|ZP_00952840.1| fatty oxidation complex, alpha subunit [Oceanicaulis sp. HTCC2633]
gi|83852766|gb|EAP90619.1| fatty oxidation complex, alpha subunit [Oceanicaulis alexandrii
HTCC2633]
Length = 680
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/509 (34%), Positives = 277/509 (54%), Gaps = 31/509 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEH--RRPWVATLYKTDKIEP 58
M+ P+ E+A SLGLVD +V ++L A +A + RR T +TDK+
Sbjct: 150 MIAKGDPISAEKAQSLGLVDELVEADKLRDAAIAFARARIADGPRR----TGARTDKLS- 204
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+A FA+ AR+ + P CI+ V+A GL+ E E F KL+ +
Sbjct: 205 -ADAEVFHAFAQKNARR-FRGMDAPQACIEAVKAATEKPLSEGLKLERELFTKLMTGDQS 262
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRR-VKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L H+FFA+R +K+ + PR+ V V ++G G MG GI + + PV L E
Sbjct: 263 AALRHLFFAERAAAKIDDIAKD--TPRKTVSSVGVIGAGTMGGGITMNFLSAGIPVTLVE 320
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L+ G+ +R N ++ KG+++Q++ EK ++LLT L+ ++ D D++IEA+ E
Sbjct: 321 REQAALDRGVATIRKNYEASAAKGRLSQDQVEKAMALLTPTLEMDALSDCDLIIEAVFEL 380
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K++IF L+ ILA+NTS +D+N I T + ++G HFFSPA++M LLEI
Sbjct: 381 MRIKKEIFTALDSIAKKDAILATNTSYLDVNEIAAVTQRPESVLGLHFFSPANIMKLLEI 440
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR +T+ V+ +D+ ++I K +V G C GF NRM A L+ G + +
Sbjct: 441 VRGAKTADTVLATAMDLSRRIGKVAVVAGVCHGFIGNRMLAQRQAEANSLILEGAKPWDV 500
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DR + +FG+PMGPF++ADL G + P+ T S + I+ E R G+ T
Sbjct: 501 DRVLVEFGLPMGPFQMADLAGLDIGWD---------PDATSSSTVREILCEQDRRGQKTG 551
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV---AIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY YD+ R+ +P V++ I + +G AID +++I E + +P+VNE
Sbjct: 552 AGFYDYDQNRRGAPSEHVERLIAEFAEKAGYEQRAID-------DQEIRERLLYPMVNEG 604
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ EGIA +A+D+D+ V G G+P YR
Sbjct: 605 AKILDEGIAQRASDIDVVWVYGYGWPTYR 633
>gi|226355857|ref|YP_002785597.1| peroxisomal bifunction [Deinococcus deserti VCD115]
gi|226317847|gb|ACO45843.1| putative Fatty acid oxidation complex subunit alpha [Deinococcus
deserti VCD115]
Length = 692
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 180/503 (35%), Positives = 279/503 (55%), Gaps = 12/503 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML+ P++G EA LGLVD +V L+ A ++A + R L + + G
Sbjct: 152 MMLSGNPIRGAEARELGLVDELVQ-GDLLEGAVRFARAHADAR-----PLPRISERSVEG 205
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ E+F AR +K P + ID+ E + G + EAE F + S +
Sbjct: 206 GSPEVFAAARESIKKTHRGQLSPSLIIDLAEMAATQPFQTGWEAEAEKFMQAKDSPQSRG 265
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L HIFFA+R ++K+PG++ ++ V I+G G MG GIA + PV + E +
Sbjct: 266 LRHIFFAERESAKIPGLSK-DTPTLDIRSVGIIGAGTMGGGIAMNFLNVGIPVTIVETAQ 324
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G +R N ++ KKG+MT E EK ++LLT L+ E D D++IEA+ EN+ +
Sbjct: 325 EALDRGLGVIRRNYENSAKKGRMTMEDVEKRMALLTPTLNMEDLADADIIIEAVFENMDV 384
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K++IF L+ P ILA+NTST+D+N I T + ++G HFFSPA+VM LLEIVR
Sbjct: 385 KKEIFTKLDAIAKPGAILATNTSTLDVNEIASVTGRPESVIGLHFFSPANVMKLLEIVRA 444
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TS V+ + + KKI+K +VVG C GF NRM Y A +VE G +D +
Sbjct: 445 DKTSDSVLATSMALAKKIRKVGVVVGVCDGFVGNRMIHRYGDEARKIVEEGAAPQDVDAS 504
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ G+PMGPF+++D+ G + A + E + I+ E R G+ T G
Sbjct: 505 MNALGLPMGPFQMSDMAGLDIGYAIRQHQAKVRGEPKPDGWLDRIV-ERGRKGQKTGAGI 563
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y YDE+RK P+ E+++ I R+ G I P+ ++S+++ + + + +VNE ++ E
Sbjct: 564 YDYDEQRKPRPNDEMEELISSYRAEKG--ITPR--EISQEESTKRLAYSLVNEGAKILEE 619
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIA +A D+D+ + G GFP YR
Sbjct: 620 GIAQRAGDIDVIYIYGYGFPAYR 642
>gi|209517039|ref|ZP_03265887.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
gi|209502570|gb|EEA02578.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
Length = 696
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 170/440 (38%), Positives = 251/440 (57%), Gaps = 9/440 (2%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
+FAR A + P CID VEAGV G GL E E F L+++ ++L H F
Sbjct: 215 IQFARNSVAAIAKDFPAPHKCIDAVEAGVKDGFDKGLAFERECFVALVQTPESRALRHAF 274
Query: 126 FAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLE 184
F +R SK+P V +D + R + VA++G G MG GIA + + PV L E ++ L+
Sbjct: 275 FGERAASKIPDVPSDTPV--RDINHVAVIGAGTMGGGIAMNFLNAGIPVTLLETKQEALD 332
Query: 185 AGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQI 244
G+ +R N ++ VKKGK+ E E+ ++LLT L Y+ K D+++EA+ E + +K+Q+
Sbjct: 333 RGLATIRKNYEATVKKGKLKPEVMEQRLALLTPTLSYDDLKQADLIVEAVFEELGVKEQV 392
Query: 245 FADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTS 304
F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR +T+
Sbjct: 393 FRRLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETA 452
Query: 305 PQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKF 364
V+ ++ + KKIKKT +V G C GF NRM Y + A ++E G +D+AI KF
Sbjct: 453 KDVLATVMKLAKKIKKTAVVSGVCDGFIGNRMIEQYVRQALFMLEEGALPAQVDKAIEKF 512
Query: 365 GMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYD 424
G MGPFR++DL G + A + P+ Y S I + E R G+ T G+Y Y
Sbjct: 513 GFAMGPFRMSDLAGNDIGWAIRKRRYLERPDMLY-SKIADRLCEMGRFGQKTGGGWYDYK 571
Query: 425 E-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIA 483
R A P V + I + + + + K+S+++IVE + F +VNE ++ EGIA
Sbjct: 572 AGDRTAYPSSVVNEMISEYSKET----NSERRKISDEEIVERLVFALVNEGAKILEEGIA 627
Query: 484 VKAADLDIASVMGMGFPPYR 503
KA+D+D+ + G GFP YR
Sbjct: 628 SKASDIDMVYLTGYGFPLYR 647
>gi|27382932|ref|NP_774461.1| fatty oxidation complex subunit alpha [Bradyrhizobium japonicum
USDA 110]
gi|27356105|dbj|BAC53086.1| bll7821 [Bradyrhizobium japonicum USDA 110]
Length = 698
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 275/504 (54%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EA GL++ +V S + +L +RP K+
Sbjct: 152 MIVGGDPIGAAEALKNGLIEEIV--EGPASGGEAFVRKLLAEKRPLRRLRDDDSKLAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K++ L P D V + GL+KE E F KL+ S+ K+
Sbjct: 210 ADRSIFTNAVAAMTKKSRGLEAPFAAADAVGYAIDFPFDEGLKKEREGFLKLVASDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +K+ GV + G R V +VAILG G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREAAKIAGVPE-GTKSRPVNRVAILGAGTMGGGIAMSFANAGVPVTLIETGE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+TGV+ E+ D D+VIEA+ E +++
Sbjct: 329 EQLKRGLGIMQKNWEATAARGGIPADAPAKRMALITGVVGIENVGDADLVIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L+++ P +LASNTS ++++ I + T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFGKLDQFAKPGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRA 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++T+P +V + I +KI K P VVG C GF NRM + + L+ G +D
Sbjct: 449 DKTAPDALVTAVTIARKIAKVPAVVGVCDGFVGNRMLAQRGKQSEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R A PDPEV+K I++ + G K +S+++I+E + +P++NE ++
Sbjct: 562 YKYEAGSRSALPDPEVEKLIDETLARLGR----KKRAVSDEEILERMMYPMINEGAKILE 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ + G G+P YR
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYR 641
>gi|148553751|ref|YP_001261333.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas wittichii RW1]
gi|148498941|gb|ABQ67195.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Sphingomonas wittichii RW1]
Length = 678
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/503 (34%), Positives = 271/503 (53%), Gaps = 22/503 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ P+ +A LGLVD V A L+ A +WA ++ RRP L +T + G
Sbjct: 150 MIVSGDPIPAGKAAELGLVDHVAAEGSLIEEAHRWA-QVIAGRRP----LPRTGERPVAG 204
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+A I ++A ARK T P C + + A + GL E F++L+ + +
Sbjct: 205 DAAAIDRYAETHARKLR-GQTAPQACFEALRAAIDLPLAEGLAVERGLFRQLVAGDQSAA 263
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H FFA+R +++ G+ D + P ++ V ++G G MG+GIA A + V+L E
Sbjct: 264 LRHYFFAERRAARIDGL-DASIEPLPIETVGVIGAGTMGAGIAMAFLSKGLRVVLLETGA 322
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ +R ++ V KG+MTQE ++ ++ L+ LDY + D++IEA+ E +++
Sbjct: 323 DALDRGLANIRRTYEASVAKGRMTQEAGDQALARLSTTLDYAALGGCDLIIEAVFELMAV 382
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++FA ++ P ILA+NTS +D++ I T D +VG HFFSPA++M LLE+VR
Sbjct: 383 KREVFARIDAVARPGAILATNTSYLDIDEIAAATGRPDHVVGLHFFSPANIMKLLEVVRG 442
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSP+V+ + + K+I K +V GN GF NR+ AF L+ G + ID A
Sbjct: 443 ARTSPRVLATAMALAKRIGKIAVVAGNGYGFIGNRLLARRRSEAFELLLEGVAPWDIDEA 502
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
FGMPMGPFR++DL G + +EN + + R G+ KG+
Sbjct: 503 HVGFGMPMGPFRMSDLAGVDIGWHRDPARVENVRDALCAA---------GRLGQKAGKGY 553
Query: 421 YLYDERRKASPDPEVKKFIEK-ARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y YDE R+A+P E I+ AR D + DI+E + +V+E R+ A
Sbjct: 554 YDYDEARQATPSAEALAIIDAFARGQGRARRD-----VPRDDILERTLYAMVDEGARLLA 608
Query: 480 EGIAVKAADLDIASVMGMGFPPY 502
EGIA +A+D+D+ V G G+P Y
Sbjct: 609 EGIAQRASDIDVVWVNGYGWPSY 631
>gi|332141154|ref|YP_004426892.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
ecotype']
gi|410861466|ref|YP_006976700.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii AltDE1]
gi|327551176|gb|AEA97894.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
ecotype']
gi|410818728|gb|AFV85345.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii AltDE1]
Length = 708
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/469 (34%), Positives = 251/469 (53%), Gaps = 5/469 (1%)
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E + +F AQ +K P+ CI+ V GL+ E + F + + + ++
Sbjct: 212 ETKGVFDAVTAQTKKATRGFFAPLKCIEAVRGAYTLAFDDGLKNEGKLFMECMNTPQARA 271
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
H FFA+R V D R ++KVAI+G G MG GIA + PV + E+ E
Sbjct: 272 QQHFFFAERAAGHVSDF-DKNTPERSIEKVAIIGAGTMGGGIAMNFANAGIPVTMLELKE 330
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ LE G+ +R N ++ KKGK+TQE+ E ++LL+G Y+ DVD+VIEA+ E + +
Sbjct: 331 EALEKGLALIRKNYENSAKKGKLTQEQVESRMALLSGTTSYDDLSDVDLVIEAVFEKMEV 390
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F+ L+K C P ILASNTST+D++ I T + ++G HFFSPA+VM LLE+V+
Sbjct: 391 KKTVFSTLDKVCKPGAILASNTSTLDIDEIATATSRPENVIGLHFFSPANVMKLLEVVKA 450
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS +VI + + K+I+K ++VG C GF NRM PY + A L+ G +DR
Sbjct: 451 EKTSAEVIKTCMKMAKRIRKVAVLVGVCFGFVGNRMIEPYGREANRLLLEGATPEQVDRV 510
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+T+FGMPMGPF + D+ G + E+ + + E R G T +G
Sbjct: 511 LTEFGMPMGPFTMGDMAGLDIGYYVRQSRQEHISHDPAYGAVADRLVEKGRNGLKTGRGA 570
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R PDPEV + ++ GV + + +S+++I+ + + ++NE +
Sbjct: 571 YNYEPGSRVPIPDPEVLEIAKQEAERLGVQ---QRSDISDEEILVRVMYSLINEGAAILE 627
Query: 480 EGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCYFDQ 528
EGIA K++D+D+ V G GFP YR + + L Y DQ
Sbjct: 628 EGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEVGLGTILDKLTTYRDQ 676
>gi|367472156|ref|ZP_09471747.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 285]
gi|365275555|emb|CCD84215.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 285]
Length = 698
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/504 (34%), Positives = 276/504 (54%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EA GL++ +V S ++A ++ RP KI
Sbjct: 152 MIVGGDPIGAAEALKSGLIEEIV--EGPASGGVEFARKVVAENRPLRKLRDDESKIAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K++ L P D V + GL++E E F KL+ S+ K+
Sbjct: 210 ADRSIFTNAVAAITKKSRGLEAPFAAADAVGYAIDLPFDEGLKREREGFLKLVASDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +K+ V + G R+V++VAI+G G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREAAKIASVPE-GTKGRKVERVAIIGAGTMGGGIAMSFANAGIPVTLIETAE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+ G + E+ KD D+VIEA+ E +++
Sbjct: 329 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALIDGKVGLENVKDADLVIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L++Y P +LASNTS ++++ I T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFGKLDQYAKPGAVLASNTSYLNIDAIAAETSRPQDVLGMHFFSPANVMKLCEIVRA 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P +V + I +KI K P VVG C GF NRM + A L+ G +D
Sbjct: 449 EKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQAEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ +A PDP+V+K I++ + G+ K +S+++I+E + +P++NE ++ A
Sbjct: 562 YKYEAGSRAPLPDPDVEKLIDETLAKLGL----KRRAVSDEEILERMMYPMINEGAKILA 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ + G G+P YR
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYR 641
>gi|392423205|ref|YP_006459809.1| enoyl-CoA hydratase [Pseudomonas stutzeri CCUG 29243]
gi|390985393|gb|AFM35386.1| enoyl-CoA hydratase [Pseudomonas stutzeri CCUG 29243]
Length = 701
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/506 (34%), Positives = 272/506 (53%), Gaps = 12/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ P+ +A +VD + LV+ +A +++ R T +T ++
Sbjct: 152 MIVSGTPISAAKAVEHSIVDELFE-GDLVNAGLAYARRMVDEGRAPRRTGEQTRGLDS-A 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ + + A+ K+ P L P+ CI VEA GL++E E F + L S +
Sbjct: 210 DNEALIRAKHAEVAKRMPGLFSPLRCIAAVEAATKLPLAEGLKRERELFAECLNSPQRGA 269
Query: 121 LVHIFFAQRGTSKVPGVTDL--GLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
LVH FF++R K+ DL + PR +K A++GGG MG GI + + PV L E+
Sbjct: 270 LVHSFFSERQAGKI---NDLPSDVKPRSIKTAAVIGGGTMGVGITLSFANAGVPVKLLEI 326
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N++ L+ G+ R R + VK+G +T+E E+ ++L+ GV +Y + D D+V+EA+ E +
Sbjct: 327 NDESLQRGLQRARDTYAASVKRGSLTEEAMEQRLALVEGVTEYAALADADVVVEAVFEEM 386
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+KQQ+F L+ C P ILASNTS++DL+ I T + +VG HFFSPA+VM LLE+V
Sbjct: 387 GVKQQVFEQLDAVCKPGAILASNTSSLDLDAIAAFTKRPEDVVGLHFFSPANVMRLLEVV 446
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +TS +V+ + IGK++KK +VVG C GF NRM F Y + A L+E G +D
Sbjct: 447 RGEKTSDEVLATAMAIGKQLKKVSVVVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVD 506
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ FGM MGPF + DL G + A + P + + G+ T
Sbjct: 507 AALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDKLCAAGMLGQKTGA 566
Query: 419 GFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y+ R +P++ +E A G+ + L E+ IVE F +VNE ++
Sbjct: 567 GYYRYEPGNRTPQENPDLAPMLEAASQEKGI----ERQTLDEQYIVERCIFALVNEGAQI 622
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA +++D+D+ + G GFP +R
Sbjct: 623 LEEGIAQRSSDIDVIYLNGYGFPAFR 648
>gi|94313504|ref|YP_586713.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA
dehydrogenase (C-terminal) [Cupriavidus metallidurans
CH34]
gi|93357356|gb|ABF11444.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA
dehydrogenase (C-terminal) [Cupriavidus metallidurans
CH34]
Length = 696
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 172/457 (37%), Positives = 251/457 (54%), Gaps = 27/457 (5%)
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P GE+ +FAR +QA P+ ++ V A + G++ E E F L+ S
Sbjct: 208 HPQGES--FLQFARNSVAQQAKGQIAPMKALEAVAASLTKSFDEGMRVEREGFMSLMASP 265
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDL--GLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L HIF A+ SK+ DL G R ++KV ++G G MG GI + + PV+
Sbjct: 266 ESRALRHIFKAEHAASKI---ADLPAGTPLREIRKVGVIGAGTMGGGITMNFLNAGIPVV 322
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
L E+ ++ L+ G+ +R N ++ +KKGK+ E+ E+ + L+TG L Y DVD+VIEA+
Sbjct: 323 LLEMKQEALDKGLATIRRNYENSMKKGKLKPEQVEQRMGLITGTLSYADLSDVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
EN+ +K+ +F L+K C ILASNTS ++L+ I T ++G HFFSPA+VM L
Sbjct: 383 FENMDVKKTVFETLDKTCKAGAILASNTSYLNLDRIASFTKRPTDVIGLHFFSPANVMRL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LEIVR QT+P V+ + + KKIKK +V G C GF NRM Y AA L+ G
Sbjct: 443 LEIVRGAQTAPDVLATCMALAKKIKKIAVVSGVCDGFIGNRMLARYGAAAGALINAGALP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI-------MQ 407
ID A+ KFGM MGP+R+ DL G + AT +R +P+ +
Sbjct: 503 QQIDGALQKFGMAMGPYRMGDLAGLDIGYAT--------RKRKAAEAGVPLRPSVADKLA 554
Query: 408 EDKRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMI 466
E R G+ T G+Y Y+ R PDP + I + RS G I P+ +S++++VE
Sbjct: 555 EAGRLGQKTGAGWYRYEAGNRDPIPDPATEALIAEFRSAQG--ITPR--AISDEEVVERC 610
Query: 467 FFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
F +VNE R+ EGIA +A+DLD+ + G GFP R
Sbjct: 611 IFALVNEGARILEEGIAARASDLDVVYLNGYGFPRLR 647
>gi|383769235|ref|YP_005448298.1| fatty oxidation complex alpha subunit [Bradyrhizobium sp. S23321]
gi|381357356|dbj|BAL74186.1| probable fatty oxidation complex alpha subunit [Bradyrhizobium sp.
S23321]
Length = 698
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 274/504 (54%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EA GL++ +V S + +L +RP K+
Sbjct: 152 MIVGGDPIGAAEALKNGLIEEIV--EGPASGGEAFVRKLLAEKRPLRRLRDDDSKLAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K++ L P D V + GL+KE E F KL+ S+ K+
Sbjct: 210 ADRSIFTNAVASMTKKSRGLEAPFAAADAVGYAIDLPFDEGLKKEREGFLKLVASDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +K+ GV + G R V +VAILG G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREAAKIAGVPE-GTKSRPVNRVAILGAGTMGGGIAMSFANAGIPVTLIETGE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+TGV+ E+ D D+VIEA+ E +++
Sbjct: 329 EQLKRGLGIMQKNWEATAARGGIPADAPAKRMALITGVVGIENVGDADLVIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L++Y P +LASNTS ++++ I + T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFGKLDQYVKPGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRA 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++T+P +V + I +KI K P VVG C GF NRM + + L+ G +D
Sbjct: 449 DKTAPDALVTAVTIARKIAKVPAVVGVCDGFVGNRMLAQRGKQSEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R A PDPEV+K I++ + + K +S+ +I+E + +P++NE ++
Sbjct: 562 YKYEPGSRSALPDPEVEKLIDETL----LRLGRKKRVVSDDEILERMMYPMINEGAKILE 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ + G G+P YR
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYR 641
>gi|398809677|ref|ZP_10568520.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
gi|398085084|gb|EJL75749.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
Length = 702
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 181/512 (35%), Positives = 283/512 (55%), Gaps = 20/512 (3%)
Query: 1 MMLTSKPVKGEEAHSL---GLVDAVV-AP----NQLVSTARQWALDILEHRRPWVATLYK 52
M+++ +PVK E SL L D + +P ++ V+ AR A P V L
Sbjct: 152 MIVSGEPVKSELLASLPGQKLFDKLADSPESVFDEAVAFARSVAGKTGADALPLVRNLPC 211
Query: 53 TDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKL 112
P G+A F+FA+ + N P+ C+D V+A AG+ +E F L
Sbjct: 212 K---HPQGDA--YFQFAKNMVGGMSKNYPAPLQCVDAVQAATKMKFDAGMAEERRIFTSL 266
Query: 113 LRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
+ + +L H+F A+R SK+P V + R +K V ++G G MG GI+ + + P
Sbjct: 267 MFTPESLALRHLFMAERAASKIPDVPE-DTPKREIKAVGVIGAGTMGGGISMNFLNAGIP 325
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
V + E+ ++ L+ G+ ++ N +++VKKGK+ Q+K+E+ ++LL+ L Y+ KD D++IE
Sbjct: 326 VKILEMKQEALDRGVATIKKNYEAQVKKGKLKQDKYEQRMALLSTTLSYDDLKDADLIIE 385
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A+ E + +K+++F +L++ ILASNTST+D++ I T +VG HFFSPA+VM
Sbjct: 386 AVFEEIGVKEKVFKELDRVAKKGAILASNTSTLDVDKIASFTERPQDVVGMHFFSPANVM 445
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
LLE+VR T+ V+ ++ IGKKIKKT +V G C GF NRM Y++ A L++ G
Sbjct: 446 KLLEVVRGKATAKDVLATVMAIGKKIKKTSVVSGVCDGFIGNRMIEQYSRQAGFLLDEGA 505
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRA 412
+D+A+ KFG MGPFR+ DL G + A + + Y S + E R
Sbjct: 506 TPQQVDKAVEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVERADMKY-SRTADKLCELGRF 564
Query: 413 GETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ T G+Y Y +R A P V K IE R G I P+ K+S+++IV+ + F +V
Sbjct: 565 GQKTGAGWYDYQAGKRDAIPSELVNKMIEDHRKELG--ITPR--KISDEEIVQRLVFALV 620
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE + +GIA K+ D+D+ + G GFP +R
Sbjct: 621 NEGAHILEDGIASKSGDIDMVYLTGYGFPIWR 652
>gi|384222108|ref|YP_005613274.1| hypothetical protein BJ6T_84430 [Bradyrhizobium japonicum USDA 6]
gi|354961007|dbj|BAL13686.1| hypothetical protein BJ6T_84430 [Bradyrhizobium japonicum USDA 6]
Length = 698
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 274/504 (54%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EA GL++ +V S + +L +RP K+
Sbjct: 152 MIVGGDPIGAAEALKNGLIEEIV--EGPASGGEAFVRKLLAEKRPLRRLRDDDSKLAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K++ L P D V + GL+KE E F KL+ S+ K+
Sbjct: 210 ADRSIFTNAVAAMTKKSRGLEAPFAAADAVGYAIDLPFDEGLKKEREGFLKLVASDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R SK+ GV + G R V +VAILG G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREASKIAGVPE-GTKSRPVNRVAILGAGTMGGGIAMSFANAGVPVTLIETGE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+ GV+ E+ D D+VIEA+ E +++
Sbjct: 329 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALINGVVGIENVGDADLVIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L++Y P +LASNTS ++++ I + T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFGKLDQYVKPGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRA 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++T+P +V + I +KI K P VVG C GF NRM + + L+ G +D
Sbjct: 449 DKTAPDALVTAVTIARKIAKVPAVVGVCDGFVGNRMLAQRGKQSEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R A PDPEV+K I++ + + K +S+++I+E + +P++NE ++
Sbjct: 562 YKYEAGSRSALPDPEVEKLIDETL----LRLGRKKRVVSDEEILERMMYPMINEGAKILE 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ + G G+P YR
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYR 641
>gi|344170553|emb|CCA82972.1| fused 3-hydroxybutyryl-CoA
epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase,enoyl-CoA hydratase, 3-hydroxyacyl-CoA
dehydrogenase [blood disease bacterium R229]
Length = 693
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 169/439 (38%), Positives = 249/439 (56%), Gaps = 7/439 (1%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
+FAR A N P CID V+A V G+Q E F +L+ + ++L H F
Sbjct: 212 LQFARNTVAAVAKNFPAPGKCIDAVQAAVEKRFDDGIQFERALFIELVNTTESRALRHAF 271
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
F +R SK+P V + R+V+ VA++G G MG GI+ + + PV L E ++ L+
Sbjct: 272 FGERAASKIPDVPE-DTPVRKVETVAVIGAGTMGGGISMNFLNAGIPVTLLETRQEALDR 330
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
GI +R N ++ KKGK+TQEK E+ ++LL L Y+ KD D+VIEA+ E++ +K+ +F
Sbjct: 331 GIATIRKNYENSAKKGKLTQEKVEEFMALLKPTLSYDDIKDADLVIEAVFEDMGVKETVF 390
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR T+
Sbjct: 391 KTLDEVVKPGAILASNTSTLDVDRIAGFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAK 450
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
V+ ++ I K IKKT +V G C GF NRM Y++ A L++ G +DRA+ KFG
Sbjct: 451 DVLATVMKIAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAVEKFG 510
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE 425
MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+Y Y
Sbjct: 511 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIIY-SKTADLLCEKGRFGQKTGAGWYDYKA 569
Query: 426 -RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
RK P EV I + G+ K+S+++IVE + + +VNE ++ EGIA
Sbjct: 570 GDRKPYPSQEVNDMIVQHSKALGIT----RRKISDEEIVERLVYALVNEGAKILDEGIAS 625
Query: 485 KAADLDIASVMGMGFPPYR 503
KA+D+D+ + G GFP +R
Sbjct: 626 KASDIDMVYLTGYGFPLFR 644
>gi|221066315|ref|ZP_03542420.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
gi|220711338|gb|EED66706.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
Length = 699
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 259/448 (57%), Gaps = 11/448 (2%)
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
P GEA F+FA + + N P+ C++ V+ G+ E E F +L+ +
Sbjct: 211 PQGEA--YFEFAATMVQGMSKNFPAPLRCLEAVKNATTKKFDDGMMAEREAFMQLMMTPE 268
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAP-RRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL H+F A+R SK+P V G P R ++ V ++G G MG GI+ + + PV +
Sbjct: 269 SRSLRHLFMAERAASKIPDVP--GDTPVREIRTVGVIGAGTMGGGISMNFLNAGIPVTIL 326
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E ++ L+ G+ +R N +++V+KGK++++K+E+ +SLL+ L+Y K+ D++IEA+ E
Sbjct: 327 ETKQEALDRGVATIRKNYEAQVRKGKLSEQKYEQRMSLLSTTLNYGDLKNADLIIEAVFE 386
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+Q+F L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE
Sbjct: 387 ELGVKEQVFKQLDEVARPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLE 446
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR T+ V+ ++ + KKIKKT +V G C GF NRM Y++ A L++ G
Sbjct: 447 VVRGKATAKDVLATVMKVAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGASPQQ 506
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+D+AI KFG MGPFR+ DL G + A + P+ Y S + E R G+ T
Sbjct: 507 VDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRHVEQPDMKY-SASADRLCELGRFGQKT 565
Query: 417 RKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y R A P V K I++ R G + P+ K+S+++IV+ + + +VNE
Sbjct: 566 GAGWYDYVPGNRDAIPSEVVAKMIDEHRKSLG--LTPR--KISDEEIVQRLVYALVNEGA 621
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ +GIA K+ D+D+ + G GFP +R
Sbjct: 622 QILEDGIASKSGDIDMVYLTGYGFPLWR 649
>gi|393778010|ref|ZP_10366298.1| multifunctional 3-hydroxybutyryl-CoA epimerase
/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
dehydrogenase [Ralstonia sp. PBA]
gi|392715061|gb|EIZ02647.1| multifunctional 3-hydroxybutyryl-CoA epimerase
/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
dehydrogenase [Ralstonia sp. PBA]
Length = 699
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 183/507 (36%), Positives = 279/507 (55%), Gaps = 20/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLG--LVDAVVAPNQLVSTARQWALDILEHRR-PWVATLYKTDKIE 57
M++T K V A +LG L D VV +++S A A ++ + R P V D+
Sbjct: 156 MIVTGKTVT---AAALGAPLFDRVV-DGEVLSAALALAQEVADSRPLPRV-----RDRQV 206
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L A F+ AR + ++PNL P+ C+D V A + GL KE F +L RS
Sbjct: 207 KLPGADAFFQHARRIVQARSPNLPAPLKCVDAV-AAALEPFDIGLPKERAMFVELSRSRE 265
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L H FFA+R K+P + G R V+ A++G G MG GIA + PV L+E
Sbjct: 266 ARALQHGFFAEREAPKIPALP-AGTQARDVQAGAVIGAGTMGGGIAMNFANAGIPVWLRE 324
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+++ L+ G+G +R N ++ KKG++T + E+ ++L+ L Y D+VIEA+ E+
Sbjct: 325 TSQEALDRGLGIIRRNYEASAKKGRLTDAQVEQRMALIRPTLQYADIAQADVVIEAVFED 384
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K+ +F L++ P ILA+NTST+D+N I T +VG HFFSPA+VM LLE+
Sbjct: 385 WGVKETVFRTLDEVMKPGAILATNTSTLDVNRIAAFTRRPQDVVGLHFFSPANVMRLLEV 444
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V+ T+P VI + + K+ K ++ G C GF NRM Y + A L+E G +
Sbjct: 445 VQGAATAPDVIATAMALAKRFSKVGVLSGVCDGFIGNRMLDRYIRQAHFLLEEGALPEQV 504
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+ KFGM MGP R+ D+VG + A + +P++ + + P+ E R G+
Sbjct: 505 DRALEKFGMAMGPCRMNDMVGNDIGWAIRKRRYVEYPDQAFARVADPLC-EAGRLGQKAG 563
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
KG+Y Y+ +R PDPEV+ IE + G+ ++S+++IVE F +VNE R
Sbjct: 564 KGWYRYEPGKRDPIPDPEVRALIEAYSAQHGI----TRRRISDQEIVERTVFALVNEGAR 619
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA +A+DLD + G GFP +R
Sbjct: 620 LLEEGIAQRASDLDAVFLTGYGFPAFR 646
>gi|300691451|ref|YP_003752446.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum PSI07]
gi|299078511|emb|CBJ51166.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum PSI07]
Length = 693
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 169/439 (38%), Positives = 249/439 (56%), Gaps = 7/439 (1%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
+FAR A N P CID V+A V G+Q E F +L+ + ++L H F
Sbjct: 212 LQFARNTVAAVAKNFPAPGKCIDAVQAAVEKRFDDGIQFERVLFIELVNTTESRALRHAF 271
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
F +R SK+P V + R+V+ VA++G G MG GI+ + + PV L E ++ L+
Sbjct: 272 FGERAASKIPDVPE-DTPVRKVETVAVIGAGTMGGGISMNFLNAGIPVTLLETRQEALDR 330
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
GI +R N ++ KKGK+TQEK E+ ++LL L Y+ KD D+VIEA+ E++ +K+ +F
Sbjct: 331 GIATIRKNYENSAKKGKLTQEKVEEFMALLKPTLSYDDIKDADLVIEAVFEDMGVKETVF 390
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR T+
Sbjct: 391 KTLDEVVKPGAILASNTSTLDVDRIAGFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAK 450
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
V+ ++ I K IKKT +V G C GF NRM Y++ A L++ G +DRA+ KFG
Sbjct: 451 DVLATVMKIAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAVEKFG 510
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE 425
MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+Y Y
Sbjct: 511 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIIY-SKTADLLCEKGRFGQKTGAGWYDYKA 569
Query: 426 -RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
RK P EV I + G+ K+S+++IVE + + +VNE ++ EGIA
Sbjct: 570 GDRKPYPSQEVNDMIVQHSKALGIT----RRKISDEEIVERLVYALVNEGAKILDEGIAS 625
Query: 485 KAADLDIASVMGMGFPPYR 503
KA+D+D+ + G GFP +R
Sbjct: 626 KASDIDMVYLTGYGFPLFR 644
>gi|170738585|ref|YP_001767240.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium sp.
4-46]
gi|168192859|gb|ACA14806.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium sp.
4-46]
Length = 691
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 272/506 (53%), Gaps = 20/506 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+++ P+ +A ++GL+D + L + A +A ++ RP D+ E L
Sbjct: 154 VIVGGAPLGAGQAAAMGLIDELAPEEGLRAHAVAFAQRVVAEGRPLTKI---RDRDERLA 210
Query: 61 EARE---IFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
E R+ +F R + ++ P CI VEA GL E E F KL+
Sbjct: 211 EGRDAPGLFDAFRKENARRMRGFEAPEACIACVEAACRLPFPQGLAFEREQFLKLVSGSQ 270
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+ ++FFA+R T+K+P V + R + +V ++G G MG GIA + + PV + E
Sbjct: 271 SAAQRYVFFAERQTAKIPDVPE-DTPTRPIARVGVIGAGTMGGGIAMNFLNAGIPVTIVE 329
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L+ G+ +R+N ++ +KG++ E + + LL L E KD D++IEA+ E+
Sbjct: 330 ARREALDRGLAVIRSNYENTARKGRLRPEDVQTRMGLLADTLAIEDLKDCDLIIEAVFED 389
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K++IF+ L++ P ILASNTS +D++ I T ++G HFFSPA+VM LLE+
Sbjct: 390 MGIKKEIFSKLDRVAKPGAILASNTSYLDIDEIASVTGRPADVIGMHFFSPANVMRLLEV 449
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR +T+ VI + +G+K+ K ++VG C GF NRM + A L+ G + +
Sbjct: 450 VRGARTAKDVIATAMQVGRKVGKIAVLVGVCHGFVGNRMLAERQREANRLILEGVTPWDV 509
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DR I +FG+PMGPF ++DL G + + E + ++ E R G+ T
Sbjct: 510 DRVIYEFGLPMGPFAMSDLAGLDIGWSR---------ETNRSESVRDLLCEIDRRGQKTG 560
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
GFY YD +RKASP P ++ I + + GVA P S+++I+E +P+VNE ++
Sbjct: 561 AGFYDYDAKRKASPSPVTEEIIARVAARQGVARKPA----SDQEILERCLYPMVNEGAKI 616
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EG A++A+D+DI + G G+P YR
Sbjct: 617 LDEGKAIRASDIDIVWINGYGWPVYR 642
>gi|334344251|ref|YP_004552803.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334100873|gb|AEG48297.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 690
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 185/512 (36%), Positives = 272/512 (53%), Gaps = 33/512 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ + PV A +GLVD + A L + A +A +LE +RP L D+ E L
Sbjct: 154 LTTSGAPVGARAAKEMGLVDEL-AQGDLRADAIAFARRVLEEKRPL---LKVRDRTEKLD 209
Query: 61 EAR---EIF-KFARAQARK----QAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKL 112
EAR EIF F +A ARK +AP H I C VEA + G+ E + F +L
Sbjct: 210 EARGKPEIFANFRKANARKFRGFKAPE--HIIRC---VEATLEKSFDEGMVYERQLFNEL 264
Query: 113 LRSETCKSLVHIFFAQRGTSKVPGVT-DLGLAPRRVKKVAILGGGLMGSGIATALILSNY 171
+ H+FFA+R +KV G+ D P + KV ++G G MG GIA +
Sbjct: 265 QSDSQSAAQRHVFFAERQAAKVLGLAADTPTLP--IAKVGVIGAGTMGGGIAMNFANAGI 322
Query: 172 PVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVI 231
PV + E ++ L+ G+G +R N +S KKG+M E + + LLTG + E D D++I
Sbjct: 323 PVTIVEAKQEALDRGLGIIRGNYESTAKKGRMKAEDVDTRMGLLTGSVAMEDLADCDLII 382
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHV 291
EA+ EN+ +K+++F L+ P ILA+NTS +D++ I T + + G HFFSPA+V
Sbjct: 383 EAVFENLDVKREVFGTLDAIARPGAILATNTSYLDIDDIAAATERPESVCGLHFFSPANV 442
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
M LLE+VRT TSP+++V + + K I K ++VGN GF NR+ A LV G
Sbjct: 443 MKLLEVVRTKDTSPEIVVTAMKLAKTIGKIGVLVGNGFGFVGNRILAARNAQADRLVLEG 502
Query: 352 TDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKR 411
+ +DR + FG MG F++ DLVG V E T + + I+ E R
Sbjct: 503 ATPWTVDRVLYDFGFAMGHFQMRDLVGLDVGWNR---------ETTSSANVREILNEMGR 553
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ T+ G+Y YD+ RK +P P + IE + G+ + +S+ +I + I F +V
Sbjct: 554 HGQKTKGGYYDYDDNRKQTPSPIAMQVIEDFAAKQGI----ERRAVSDDEIHDRILFAMV 609
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE R+ EGIA +A+D+DI V G G+P YR
Sbjct: 610 NEGARILDEGIAARASDIDIVWVTGYGWPKYR 641
>gi|337265631|ref|YP_004609686.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
opportunistum WSM2075]
gi|336025941|gb|AEH85592.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
opportunistum WSM2075]
Length = 690
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/501 (33%), Positives = 263/501 (52%), Gaps = 18/501 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ P+ EEAH+ GLVDAV L + A +A ++ P+ + D+++
Sbjct: 152 MIVSGTPIGAEEAHAAGLVDAVF-EGDLSTHAVNFARELAPKGGPFTPVRDRDDRLKETD 210
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A F A ++A L PI C V V L E F L+ S+ ++
Sbjct: 211 LA--AFDAEAADLARKARGLEAPIACAQAVRNAVTLPFDEALAAERALFAGLIASDQSRA 268
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
H+FFA+R +KVPG RR+ +V ++G G MG GIA A + V L E +E
Sbjct: 269 QRHLFFAEREAAKVPGKD---TPKRRIARVGVIGAGTMGGGIAMAFANGGFSVTLLETSE 325
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+ + N V +G +T++ + ++ G DY D D+++EA+ E++++
Sbjct: 326 EALQRGLATIEKNYAVSVSRGSLTEDAKRQRLAQFKGSTDYADLADCDLIVEAVFEDMAV 385
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F ++ P ILA+NTS +D++ I +VG HFFSPA+VM LLEIVR
Sbjct: 386 KKEVFGKIDAVARPGAILATNTSYLDIDEIAASVSRPQDVVGLHFFSPANVMKLLEIVRA 445
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++T+P + ++D+ ++I K +VVG C GF NRM + L+ G ID+A
Sbjct: 446 DKTAPDALATVVDLARRIGKVAVVVGVCHGFVGNRMLAARGSESEELLLEGATPSQIDKA 505
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
T FG PMGPF++ DL G + N R ++I + E R G+ T +GF
Sbjct: 506 FTDFGWPMGPFQMGDLAGLDIG-------WRNRKARGQTAVIADTLCEQGRFGQKTGRGF 558
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY+ R PDPEV+ I + G+A P+ + +I+E +P+VNE ++
Sbjct: 559 YLYEAGARSGIPDPEVEALIRDKAAERGIA--PR--AIGADEIIERTLYPLVNEGAKILE 614
Query: 480 EGIAVKAADLDIASVMGMGFP 500
EGIA +A+D+D+ V G GFP
Sbjct: 615 EGIAARASDIDVVWVNGYGFP 635
>gi|427411688|ref|ZP_18901890.1| hypothetical protein HMPREF9718_04364 [Sphingobium yanoikuyae ATCC
51230]
gi|425709978|gb|EKU73001.1| hypothetical protein HMPREF9718_04364 [Sphingobium yanoikuyae ATCC
51230]
Length = 691
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 181/508 (35%), Positives = 264/508 (51%), Gaps = 24/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+M PV + A +GL+D + QL + A A +L+ RP L D+ E L
Sbjct: 154 LMTAGSPVSAKAAKEMGLIDELAIEGQLRADAIALAQRVLDEGRPL---LKVRDRTEKLD 210
Query: 61 EAR---EIF-KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
EAR EIF F +A ARK P I VEA + G+ E + F +L
Sbjct: 211 EARGKPEIFADFRKANARKFR-GFNAPEAIIRCVEASLDLPFDEGMTFERQLFNELQADS 269
Query: 117 TCKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+ H+FFA+R +KV + D + P + KV ++G G MG GIA + PV L
Sbjct: 270 QSAAQRHVFFAERQAAKVDSLPADTPILP--IAKVGVIGAGTMGGGIAMNFANAGIPVTL 327
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E NE L G+ +R N ++ KKGKM E + + LLTG + E D D++IEA+
Sbjct: 328 VETNEDALFRGLRIIRGNYETTAKKGKMKPEDVDTRMGLLTGSIAMEDLADCDLIIEAVF 387
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +K+++F L++ P ILA+NTS +D++ I T D +VG HFFSPA+VM LL
Sbjct: 388 EQIDVKREVFGKLDRIAKPGAILATNTSYLDIDDIAAATSRPDSVVGLHFFSPANVMKLL 447
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VRT T P++I + + K I K ++VGN GF NR+ A L+ G +
Sbjct: 448 EVVRTKDTKPEIIATAMKLAKTIGKIGVLVGNGYGFVGNRILAARNTQADQLILEGATPW 507
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+ + FG MG F++ DLVG V P+ T + + I+ E R G+
Sbjct: 508 AVDKVLYDFGFAMGHFQMRDLVGLDVGWN---------PKTTSSANVREILNEMGRHGQK 558
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
T+ GFY YDE RK +P P + IE + G+ +S+ +I + I F +VNE
Sbjct: 559 TKGGFYDYDENRKQTPSPVAMQVIEDFAAKQGMT----RRDISDAEIQDRILFAMVNEGA 614
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ EGIA +A+D+DI + G G+P YR
Sbjct: 615 RILDEGIASRASDIDIVWITGYGWPKYR 642
>gi|84684289|ref|ZP_01012191.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Maritimibacter alkaliphilus HTCC2654]
gi|84668042|gb|EAQ14510.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Rhodobacterales bacterium HTCC2654]
Length = 698
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 181/506 (35%), Positives = 277/506 (54%), Gaps = 21/506 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M L+ + V GEEA S+GL+D + A + A A D+L + KT + LG
Sbjct: 158 MALSGRQVSGEEALSMGLIDGLEA-GEPRDVALAAAEDVLSGK-------LKTRRTSDLG 209
Query: 61 EAREIFKFARAQARKQ-APNLTHPIVCIDVVEAGVVS-GPRA-GLQKEAEDFQKLLRSET 117
E+ + A A K A + H +++EA +S GP A G+ E + F + L+
Sbjct: 210 --VELDEAALDDAAKMVAKKMKHHPTAPNMIEAVRMSTGPMADGMAYERKSFMEGLKDPA 267
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+ + H FFA+R SK+P + PR + K+ ++GGG MGSGIATA + S + V L E
Sbjct: 268 SQGMRHAFFAERAVSKIP---EGKATPREIAKIGVIGGGTMGSGIATAALTSGFAVRLIE 324
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++++ L+ G+G + NL VK+GKM++ K + ++ L D ES DVD+VIEA+ EN
Sbjct: 325 ISQEGLDKGVGFITGNLGGAVKRGKMSEAKRDNAMARLEPSTDMESLSDVDLVIEAVFEN 384
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ IF L+K C P ILASNTS +D+N I T + ++G HFFSPA++M LLE+
Sbjct: 385 MDVKKDIFGQLDKICKPGAILASNTSYLDINEIASATSRPEDVIGLHFFSPANLMRLLEV 444
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V ++T+P+V+ + KK+KK + G C GF NR+ Y + A L+E G I
Sbjct: 445 VVADKTAPEVVATGFALAKKMKKVGVRAGVCDGFIGNRILAYYGKTAGYLMEDGASPQQI 504
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ FG MGP+++ DL G + A + P I + E+ G T
Sbjct: 505 DNALEDFGFAMGPYKVGDLAGLDIGWANRKRMSATRPNDERYVRIHDKICEEGMFGRKTG 564
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
GFY+YD+ P+P + I+ R+ G+ PK ++++IVE +++EA RV
Sbjct: 565 SGFYIYDD-EGIRPNPRALEIIDAERAAKGIL--PK--TFTDEEIVERYMTAMISEAARV 619
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D + G GFP +R
Sbjct: 620 VEEGIALRPIDVDAVFLFGYGFPRFR 645
>gi|126739002|ref|ZP_01754698.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Roseobacter sp. SK209-2-6]
gi|126720183|gb|EBA16890.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Roseobacter sp. SK209-2-6]
Length = 698
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/437 (38%), Positives = 255/437 (58%), Gaps = 18/437 (4%)
Query: 75 KQAPNLTHPIVCIDVVEAGVVSGP--RAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTS 132
K+ P C+ V+A P GL++E E F +L+ S+ L+H FF++R S
Sbjct: 218 KKGRGQLSPATCVRAVQA-AAEAPSLEEGLKRERELFMELMNSDQRLGLIHAFFSERAVS 276
Query: 133 KVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRA 192
K+P + G+ PR++ + ++GGG MG+GIATA +LS V++ E++E+ A GR+
Sbjct: 277 KLPELK--GVEPRQLASIGVIGGGTMGAGIATAALLSGLSVVMLEMSEEAAAAAKGRIAG 334
Query: 193 NLQSRVKKGKMTQEKF----EKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADL 248
NLQ +K+GK+++E+F E+ +SL TG YE+ DVD+VIEA+ E +S+K+++F L
Sbjct: 335 NLQGALKRGKISEEQFAQLTEEALSLATG---YEALSDVDLVIEAVFEEMSVKKEVFGKL 391
Query: 249 EKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVI 308
+ C ILASNTS +D+N I T + ++G HFFSPAHVM LLE+V ++T+ V+
Sbjct: 392 DAVCKKGAILASNTSYLDVNEIAAATSRPEDVIGLHFFSPAHVMKLLEVVVADKTALDVV 451
Query: 309 VDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPM 368
++GK++KK + G C GF NR+ Y +AA +V G Y ID+A+T+FG M
Sbjct: 452 ATGFELGKRLKKISVRAGVCDGFIGNRILATYRKAADHMVLDGASPYQIDKALTEFGFAM 511
Query: 369 GPFRLADLVGFGVAIAT-GMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-R 426
GPF +ADL G + A + E R S M E G+ T KG+Y+Y+ +
Sbjct: 512 GPFAVADLAGLDIGWAVRKRKRAEGMDPRDRDSSYADKMCEAGNFGQKTGKGYYVYEAGK 571
Query: 427 RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKA 486
R +P+PEV I R+ G I P+ ++++I+ +VNEA +V EGIA +
Sbjct: 572 RGGTPNPEVSDLIAAERAEQG--ITPR--AFTDEEILNRYMAAMVNEAAKVVGEGIARRP 627
Query: 487 ADLDIASVMGMGFPPYR 503
D+D+ + G GFP YR
Sbjct: 628 LDVDMTLLFGYGFPRYR 644
>gi|241663087|ref|YP_002981447.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia pickettii
12D]
gi|240865114|gb|ACS62775.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Ralstonia pickettii
12D]
Length = 693
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 276/504 (54%), Gaps = 12/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ + E+ GL D ++ L++ A +AL + K + P G
Sbjct: 152 MIVSGNAIPSEKLAKSGLFDQMIE-GDLMAGAIDFALKAAAEGKLPKLRDRKVEHDNPQG 210
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+FAR A N P C+D V+A V G++ E + F +L+ + ++
Sbjct: 211 ----FLQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIKFERDLFIELVNTPESRA 266
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H FF +R SK+P V + R+V+KVA++G G MG GI+ + + PV + E +
Sbjct: 267 LRHAFFGERAASKIPDVPE-DTPVRKVEKVAVIGAGTMGGGISMNFLNAGIPVTILETKQ 325
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+ +R N ++ KKGK+TQEK E+ ++LLT L Y+ KD D+VIEA+ E + +
Sbjct: 326 EALDRGVATIRKNYENSAKKGKLTQEKVEQRMALLTPTLSYDDIKDADLVIEAVFEEMGV 385
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F L++ ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 KEVVFKKLDEVVKQGAILASNTSTLDVDKIASFTKRPQDVVGMHFFSPANVMKLLEVVRG 445
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+ V+ ++ + K IKKT +V G C GF NRM Y++ A L++ G +D+A
Sbjct: 446 KETAKDVLATVMKLAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDKA 505
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I KFG MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+
Sbjct: 506 IEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEMGRFGQKTGGGW 564
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y RK P+ +V I + G+ K+S+++IVE + F +VNE ++
Sbjct: 565 YDYKAGDRKPYPNQQVNDMIVQHSKDLGIT----RRKISDEEIVERLVFALVNEGAKILE 620
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP +R
Sbjct: 621 EGIASKASDIDMVYLTGYGFPLFR 644
>gi|187928533|ref|YP_001899020.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia pickettii
12J]
gi|187725423|gb|ACD26588.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Ralstonia pickettii
12J]
Length = 693
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 275/504 (54%), Gaps = 12/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ + E+ GL D ++ L++ A +AL + K + P G
Sbjct: 152 MIVSGNAIPSEKLAKSGLFDQMI-EGDLMAGAIDFALKAAAEGKLPKLRDRKVEHDNPQG 210
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+FAR A N P C+D V+A V G++ E + F +L+ + ++
Sbjct: 211 ----FLQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIKFERDLFIELVNTSKSRA 266
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H FF +R SK+P V + R+V+KVA++G G MG GI+ + + PV + E +
Sbjct: 267 LRHAFFGERAASKIPDVPE-DTPVRKVEKVAVIGAGTMGGGISMNFLNAGIPVTMLETKQ 325
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+ +R N ++ KKGK+TQEK E+ ++LLT L Y+ KD D+VIEA+ E + +
Sbjct: 326 EALDRGVATIRKNYENSAKKGKLTQEKVEQRMALLTPTLSYDDIKDADLVIEAVFEEMGV 385
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F L++ ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 KEVVFKKLDEVVKQGAILASNTSTLDVDKIASFTKRPQDVVGMHFFSPANVMKLLEVVRG 445
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
T+ V+ ++ + K IKKT +V G C GF NRM Y++ A L++ G +D+A
Sbjct: 446 KDTAKDVLATVMKLAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDKA 505
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I KFG MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+
Sbjct: 506 IEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEMGRFGQKTGGGW 564
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y RK P+ +V I + G+ K+S+++IVE + F +VNE ++
Sbjct: 565 YDYKAGDRKPYPNQQVNDMIVQHSKDLGIT----RRKISDEEIVERLVFALVNEGAKILE 620
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP +R
Sbjct: 621 EGIASKASDIDMVYLTGYGFPLFR 644
>gi|309781993|ref|ZP_07676723.1| enoyl-CoA hydratase [Ralstonia sp. 5_7_47FAA]
gi|404377685|ref|ZP_10982785.1| hypothetical protein HMPREF0989_04269 [Ralstonia sp. 5_2_56FAA]
gi|308919059|gb|EFP64726.1| enoyl-CoA hydratase [Ralstonia sp. 5_7_47FAA]
gi|348611680|gb|EGY61320.1| hypothetical protein HMPREF0989_04269 [Ralstonia sp. 5_2_56FAA]
Length = 693
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 275/504 (54%), Gaps = 12/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ + E+ GL D ++ L++ A +AL + K + P G
Sbjct: 152 MIVSGNAIPSEKLAKSGLFDQMI-EGDLMAGAIDFALKAAAEGKLPKLRDRKVEHDNPQG 210
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+FAR A N P C+D V+A V G++ E + F +L+ + ++
Sbjct: 211 ----FLQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIKFERDLFIELVNTSESRA 266
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H FF +R SK+P V + R+V+KVA++G G MG GI+ + + PV + E +
Sbjct: 267 LRHAFFGERAASKIPDVPE-DTPVRKVEKVAVIGAGTMGGGISMNFLNAGIPVTILETKQ 325
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+ +R N ++ KKGK+TQEK E+ ++LLT L Y+ KD D+VIEA+ E + +
Sbjct: 326 EALDRGVSTIRKNYENSAKKGKLTQEKVEQRMALLTPTLSYDDIKDADLVIEAVFEEMGV 385
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F L++ ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 KEVVFKKLDEVVKQGAILASNTSTLDVDKIASFTKRPQDVVGMHFFSPANVMKLLEVVRG 445
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
T+ V+ ++ + K IKKT +V G C GF NRM Y++ A L++ G +D+A
Sbjct: 446 KDTAKDVLATVMKLAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDKA 505
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I KFG MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+
Sbjct: 506 IEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEMGRFGQKTGGGW 564
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y RK P+ +V I + G+ K+S+++IVE + F +VNE ++
Sbjct: 565 YDYKAGDRKPYPNQQVNDMIVQHSKDLGIT----RRKISDEEIVERLVFALVNEGAKILE 620
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP +R
Sbjct: 621 EGIASKASDIDMVYLTGYGFPLFR 644
>gi|377820680|ref|YP_004977051.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia sp. YI23]
gi|357935515|gb|AET89074.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia sp. YI23]
Length = 694
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 246/443 (55%), Gaps = 7/443 (1%)
Query: 62 AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSL 121
A +FAR A + P CID +E GV G GL E E F L+++ ++L
Sbjct: 209 AEGFIQFARNGVAAAAKHFPAPHKCIDAIEKGVKEGFERGLAFERECFLSLVQTPESRAL 268
Query: 122 VHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEK 181
H FF +R K+ V G R + +V ++G G MG GIA + + +PV L E ++
Sbjct: 269 RHAFFGERAAGKIADVPP-GTPVRTIARVGVVGAGTMGGGIAMTFLNAGFPVTLLETKQE 327
Query: 182 FLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLK 241
L+ G+ +R + +++ KGK+T+E+ E ++L+T L Y D D++IEA+ E++S+K
Sbjct: 328 ALDRGLATIRGHYEAQAAKGKLTREQAEARMALITPTLVYGDLADADLIIEAVFEDLSVK 387
Query: 242 QQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTN 301
+ +F L++ P +LASNTST+DLN I T ++G HFFSPA+VM LLE+VR
Sbjct: 388 ESVFRQLDQCAKPGAVLASNTSTLDLNRIASFTQRPGDVIGMHFFSPANVMKLLEVVRGE 447
Query: 302 QTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAI 361
+T V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G IDRAI
Sbjct: 448 KTGKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQIDRAI 507
Query: 362 TKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFY 421
KFG MGPFR++DL G + A + P Y S I + E R G+ T G+Y
Sbjct: 508 EKFGFAMGPFRMSDLAGNDIGWAIRKRRYREQPALHY-SGIADTLCEAGRFGQKTGAGWY 566
Query: 422 LYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y +R+A P V I + G+A ++ +++IVE + +VNE ++ E
Sbjct: 567 DYQAGKREALPSQAVDAMIVAYSNERGIA----RRRIGDEEIVERLVLALVNEGAKILEE 622
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIA KA+D+D+ + G GFP +R
Sbjct: 623 GIAAKASDIDMVYLTGYGFPLWR 645
>gi|254503061|ref|ZP_05115212.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Labrenzia alexandrii DFL-11]
gi|222439132|gb|EEE45811.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Labrenzia alexandrii DFL-11]
Length = 699
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 181/508 (35%), Positives = 282/508 (55%), Gaps = 24/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVV--APNQLVSTARQWALD-ILEHRRPWVATLYKTDKIE 57
M+ + KPV ++A GLVDAV AP L A Q D L HR KT +++
Sbjct: 159 MITSGKPVSAQKALESGLVDAVEEGAPRDLALKAAQALADGTLSHR--------KTGELD 210
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRA-GLQKEAEDFQKLLRSE 116
+ + I + R + +K P L P C+D VEA + P A GL+KE FQ + S
Sbjct: 211 TDADQQAIEAY-RKKLQKTQPLLFSPHRCVDAVEASTL--PLADGLKKERSLFQDCMESP 267
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
L+H FFA+R SK+P + PR++ K+ ++GGG MGSGIATA +L+ + V L
Sbjct: 268 QRAGLIHAFFAERAVSKIPEAKE---TPRQIAKIGVIGGGTMGSGIATACLLAGFDVTLT 324
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISL-LTGVLDYESFKDVDMVIEAII 235
E ++ L+ G+ + NL VK+GK+ +K ++ +S L+ ++ + + D++IEA+
Sbjct: 325 ERDQGGLDRGLATIAKNLDGAVKRGKLAADKRDQILSNNLSSAVELGALSEADLIIEAVF 384
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +K+ IF +L+K +LASNTS +D+N I T ++G HFFSPAHVM LL
Sbjct: 385 EEMDVKRSIFTELDKVAKQGAVLASNTSYLDINEIAAVTSRPQDVIGLHFFSPAHVMRLL 444
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+V ++T+P + + KK+KK + G C GF NR+ Y +AA ++ G
Sbjct: 445 EVVVADKTAPDAVATGFALAKKLKKVAVRAGVCDGFIGNRILSFYKKAADYMMMDGASPE 504
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D A+T FG MGP+++ DL G ++ AT + P S I+ + E+ G
Sbjct: 505 EVDTAMTNFGFAMGPYQVYDLAGLDISWATNKRRAATRPAEERYSPILDRICEEGWFGRK 564
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
T +GFY+YDE A P+P+ K I++ R+ +G I P+ K + ++IV +++EA
Sbjct: 565 TGRGFYIYDE-TGARPNPDALKIIDEERAKAG--ITPR--KFTAEEIVSRFMTAMISEAI 619
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
RV +GIA++ D+D + G GFP +R
Sbjct: 620 RVLEDGIALRPIDIDAVYLFGYGFPRFR 647
>gi|390450411|ref|ZP_10236003.1| enoyl-CoA hydratase [Nitratireductor aquibiodomus RA22]
gi|389662484|gb|EIM74046.1| enoyl-CoA hydratase [Nitratireductor aquibiodomus RA22]
Length = 690
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 269/506 (53%), Gaps = 27/506 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ KP+ +EA LG VD V A + L++ A +A D+ ++P + +++K+
Sbjct: 152 MIVSGKPIGMDEAVRLGAVDRV-AESDLLAEAVAFARDMAASKKPHIHIRARSEKL---- 206
Query: 61 EAREIFKFARAQ--ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
A ++ F A A K+A LT P + V + A L +E E F + SE
Sbjct: 207 -AIDLAAFDEAVKVATKKARGLTAPHTAAEAVRNAITMEFDAALDRERELFLERRDSEES 265
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+ H+FFA R ++VPG+ A R++ + ++G G MG+GIA AL PV + E+
Sbjct: 266 AAQRHLFFATREATRVPGIPRETEA-RKIARAGVIGAGTMGAGIAMALANGGIPVTILEM 324
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
NE + G+ + +K+G +T E+ E ++G Y D D+VIEA+ E +
Sbjct: 325 NEDAIARGLAHIDKTYAGSLKRGSITAEEKEARTGRISGTTHYADLADCDIVIEAVFEEM 384
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+Q+F L+ P ILASNTS +D+N I T +VG HFFSPAHVM LLEIV
Sbjct: 385 GVKRQVFTALDGMLKPGAILASNTSYLDVNEIAATTKRPQDVVGLHFFSPAHVMKLLEIV 444
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +T+P VI L + +KI K P+VVG C GF NRM + L+ G +D
Sbjct: 445 RGEETAPDVIKTALALARKIGKVPVVVGVCNGFVGNRMLAARREQNEDLLLSGATPEQVD 504
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI---MQEDKRAGET 415
R T FG PMGPF++ DL G + ++ R + + PI + E G+
Sbjct: 505 RVFTDFGWPMGPFQMVDLAGLDI----------SWKHRQSQGLTAPIGDTLCEAGHFGQK 554
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T +GFYLY+E R PDP V++ IEK + GV + ++S +I E +P++NE
Sbjct: 555 TGRGFYLYEEGSRTPKPDPFVQELIEKKAAELGV----ERREISADEITERTLYPMINEG 610
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFP 500
++ E IA +A+D+D+ V G GFP
Sbjct: 611 AKILEERIAARASDIDVVWVNGYGFP 636
>gi|167644779|ref|YP_001682442.1| 3-hydroxyacyl-CoA dehydrogenase [Caulobacter sp. K31]
gi|167347209|gb|ABZ69944.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Caulobacter sp. K31]
Length = 692
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 270/503 (53%), Gaps = 16/503 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ T + V + A ++GL D++V L A +A +L +P + K+E
Sbjct: 155 MVTTGQHVPAKAALAMGLFDSLVEEGALRDGAIAFARVVLAEDKPLTRIRDQNAKVEAAR 214
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EIF RA ++ P I +EA V GL++E F +L+ +
Sbjct: 215 GKPEIFSEFRAANARKFRGFLAPENNIKCIEAAVNLPFDEGLKEERRLFMELMTGTQSAA 274
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
H+FFA+R +K+P V D + P VKKV ++G G MG GI+ + + PV + E
Sbjct: 275 QRHVFFAERQAAKIPDVPDDTPIIP--VKKVGVIGAGTMGGGISMNFLNAGIPVTIIEAK 332
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+G +R N ++ KKG++TQ+ EK ++LLT + E D D++IEA+ E +
Sbjct: 333 QENLDRGVGVIRKNYENTAKKGRLTQDDVEKRMALLTPSMHLEDLTDCDLMIEAVFELME 392
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+++F L+ P ILASNTS +DL++I T ++G HFFSPA+VM LLEIVR
Sbjct: 393 IKKEVFGKLDTIAKPGAILASNTSYLDLDVIAASTSRPQSVIGLHFFSPANVMKLLEIVR 452
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+T VI + IGK I K ++VGNC GF NRM + A L+ G + +DR
Sbjct: 453 GAKTDKSVIATAMRIGKTIGKVAVLVGNCHGFVGNRMLAQRQREAQKLILEGAMPWDVDR 512
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
+ FG+PMGPF ++DL G + + ++ S + ++ E R G+ KG
Sbjct: 513 VLYDFGLPMGPFAMSDLAGLDIGWDS---------TKSSSSTVREVLCEMDRRGQKNGKG 563
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
FY YDE R A P EV++ I + + ++S+++I+E +P+VNE ++
Sbjct: 564 FYDYDENRVAKPSKEVEQVILDFAEKRQI----QRREISDQEILERCLYPMVNEGAKILE 619
Query: 480 EGIAVKAADLDIASVMGMGFPPY 502
EG A++A+D+D + G G+P Y
Sbjct: 620 EGKAIRASDIDTVWINGYGWPVY 642
>gi|163744419|ref|ZP_02151779.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Oceanibulbus indolifex HEL-45]
gi|161381237|gb|EDQ05646.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Oceanibulbus indolifex HEL-45]
Length = 698
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 276/506 (54%), Gaps = 21/506 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVA--PNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
+ T + +K +A +G+VD V P ++ + LD RRP + + I+
Sbjct: 153 ITTGRHIKAPQALEMGIVDRVEEGDPQEVGLAYVRELLDSGAERRP-ICDMPAPAPIDWD 211
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
K R Q P + V+AGV G++ E F +L+ ++ +
Sbjct: 212 AAYEATLKKGRGQ--------ISPAEAVRAVQAGVEKPFEEGMKAERRIFSELMNTDQRQ 263
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
++H FF++R S +P + G+ PR +K + ++GGG MG+GIATA +LS + V+L E+
Sbjct: 264 GMIHAFFSERAVSNLPELK--GVEPRTLKAIGVIGGGTMGAGIATAALLSGFNVVLIEMK 321
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEK-TISLLTGVLDYESFKDVDMVIEAIIENV 238
++ +A R+ NLQ +K+GK+ Q KF+ T LT DY S DVD+V+EA+ E++
Sbjct: 322 DEAAKAAHDRISGNLQGALKRGKIDQAKFDTLTGEALTVSTDYASLSDVDLVVEAVFEDM 381
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+Q+F L+ C P C+LASNTS +D++ I + T ++G HFFSPAHVM LLE+V
Sbjct: 382 DVKKQVFGKLDAVCKPGCVLASNTSYLDVDEIADSTSRPADVIGLHFFSPAHVMKLLEVV 441
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
++T+P V+ +GK + K + G C GF NR+ Y AA +V G Y ID
Sbjct: 442 VADKTAPDVVATGFALGKALGKISVRAGVCDGFIGNRILATYRTAADHMVLDGASPYKID 501
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
A+ KFG MGPF +ADL G + AT + PE + I + E G+ T
Sbjct: 502 AALEKFGFAMGPFAVADLAGLDIGWATRKRKAATRHPEERVPTYIDRLC-EQGHFGQKTG 560
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+G+Y+Y++ +R +P+PE+ + IE+ + G I P+ + ++ +IV +VNEA +
Sbjct: 561 QGYYIYEKGKRGGTPNPEITRLIEEEQKERG--ITPR--EFTDAEIVRRYMSAMVNEAAK 616
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPY 502
V EGIA + D+D+ + G GFP Y
Sbjct: 617 VLEEGIAKRPLDIDMTLLFGYGFPRY 642
>gi|398822432|ref|ZP_10580812.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. YR681]
gi|398226887|gb|EJN13129.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. YR681]
Length = 698
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 173/504 (34%), Positives = 273/504 (54%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EA GL++ +V S + ++ +RP KI
Sbjct: 152 MIVGGDPIGAAEALKNGLIEEIV--EGPASGGEAFVRKLIAEKRPLRRLRDDDSKIAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K++ L P D V + GL+KE E F KL+ S+ K+
Sbjct: 210 ADRSIFTNAVAAMTKKSRGLEAPFAAADAVGYAIDLPFDEGLKKEREGFLKLVASDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +K+ GV + G R V +VAILG G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREAAKIAGVPE-GTKSRPVNRVAILGAGTMGGGIAMSFANAGVPVTLIETGE 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+ GV+ E+ D D+VIEA+ E +++
Sbjct: 329 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALINGVVGIENVGDADLVIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L++Y P +LASNTS ++++ I + T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFGKLDQYVKPGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRA 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++T+P +V + I +KI K P VVG C GF NRM + + L+ G +D
Sbjct: 449 DKTAPDALVTAVTIARKIAKVPAVVGVCDGFVGNRMLAQRGKQSEKLLFEGALPQQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R A PDPEV+K I++ + + K +++ +I+E + +P++NE ++
Sbjct: 562 YKYEAGSRSALPDPEVEKLIDETL----LRLGRKKRVVTDDEILERMMYPMINEGAKILE 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ + G G+P YR
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYR 641
>gi|92115984|ref|YP_575713.1| 3-hydroxyacyl-CoA dehydrogenase [Nitrobacter hamburgensis X14]
gi|91798878|gb|ABE61253.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Nitrobacter hamburgensis X14]
Length = 707
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 277/504 (54%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ +PV EA GL+DA+V S +A +L RRP ++
Sbjct: 152 MIVGGEPVGATEALKQGLIDAIV--EGPASGGEAFACRVLAERRPLRRLRDDDSRLMAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K+A L P + V + + L++E E F KL+ + K+
Sbjct: 210 ANRSIFTDAVAAVTKRARGLEAPFAAAEAVGLSLDTPFDEALKQERELFLKLMNGDQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R ++V GV + G PR+V++VAI+G G MG GIA + + PV L E+ +
Sbjct: 270 QRYAFFAEREAARVAGVPE-GTKPRKVERVAIIGAGTMGGGIAMSFANAGIPVTLIEMGD 328
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G +R N ++ +G + ++ + + L+TGV+ E KD D+VIEA+ E +++
Sbjct: 329 ESLKRGLGVMRKNFEATAARGGIAADEPARRMGLVTGVVGLEHVKDADLVIEAVFETMAV 388
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++FA L+K+ +LASNTS +++N I T ++G HFFSPA+VM L EIVR
Sbjct: 389 KKEVFATLDKFARSGAVLASNTSYLNINEIASVTKRPQDVLGMHFFSPANVMKLCEIVRG 448
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P V+V + + ++I K P+VVG C GF NRM ++ A L+ G +D
Sbjct: 449 AKTAPDVLVTAVAVARRIAKVPVVVGVCDGFVGNRMLAARSRQADKLLFEGALPRQVDAV 508
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
T+FGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 509 ATRFGMPMGPFAMDDLAGLDIG-------WRSRRDRGVKSEIADALCEAGRFGQKTGKGY 561
Query: 421 YLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ +A PDP+V+ I A + G+ + ++ + +I+E + +P VNE R+
Sbjct: 562 YKYEGGSRAPLPDPDVETLIVDACARLGL----RRREIGDNEILERLVYPTVNEGARILE 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + D+D+ + G G+P YR
Sbjct: 618 EGIAARPGDIDVVWLYGYGWPIYR 641
>gi|386333461|ref|YP_006029631.1| fused 3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum Po82]
gi|334195910|gb|AEG69095.1| fused 3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum Po82]
Length = 1292
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 167/439 (38%), Positives = 249/439 (56%), Gaps = 7/439 (1%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
+FAR A N P CID V+A V GL+ E + F +L+ + ++L H F
Sbjct: 811 LQFARNTVAAVAKNFPAPGKCIDAVQAAVEKRFDDGLKFERDLFIELVNTTESRALRHAF 870
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
F +R K+P V + R+V+KVA++G G MG GI+ + + PV + E ++ L+
Sbjct: 871 FGERAAGKIPDVPE-DTPVRKVEKVAVIGAGTMGGGISMNFLNAGIPVTILETRQEALDR 929
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
GI +R N ++ KKGK+TQEK E ++LL L Y+ +D D+VIEA+ E++ +K+ +F
Sbjct: 930 GIATIRKNYENSAKKGKLTQEKVEARMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVF 989
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR T+
Sbjct: 990 KKLDEVAKPGAILASNTSTLDVDRIAGFTKRAQDVVGMHFFSPANVMKLLEVVRGKATAK 1049
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
V+ ++ K IKKT +V G C GF NRM Y++ A L++ G +DRA+ KFG
Sbjct: 1050 DVLATVMKTAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAMEKFG 1109
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYD- 424
MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+Y Y
Sbjct: 1110 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKV 1168
Query: 425 ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
RK P EV I + G+A K+S+++IVE + + +VNE ++ EGIA
Sbjct: 1169 GDRKPYPSQEVNDMIVQHSKDLGIA----RRKISDEEIVERLVYALVNEGAKILEEGIAS 1224
Query: 485 KAADLDIASVMGMGFPPYR 503
KA+D+D+ + G GFP +R
Sbjct: 1225 KASDIDMVYLTGYGFPLFR 1243
>gi|357024730|ref|ZP_09086872.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium
amorphae CCNWGS0123]
gi|355543398|gb|EHH12532.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium
amorphae CCNWGS0123]
Length = 689
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 268/529 (50%), Gaps = 18/529 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ P+ EA GLVDAV +LV+ A ++A +++ ++ + D++
Sbjct: 152 MIVSGAPIGAVEALEAGLVDAVF-DGELVAQAVRFASEMVAKGGRFLPVRDRNDRLGKTD 210
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A F A+ K+A L PI C V + L E E F KL+ + ++
Sbjct: 211 LA--AFDRQAAELAKKARGLEAPIACAQAVRNAISLSFDEALAAERELFLKLVAGDQSRA 268
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
H+FFA+R ++ PG +A R++ ++ I+G G MG GIA A +PV L E NE
Sbjct: 269 QRHLFFAEREAARGPGKD---VARRKITRIGIIGAGTMGGGIAMAFANGGFPVTLLETNE 325
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+ + N V +G +T+ ++ + L G DY D D+++EA+ E +++
Sbjct: 326 EALQRGLATIDKNYAVSVGRGSLTEAARQQRLGLFKGSTDYADLADCDLIVEAVFEEMAV 385
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ++F L+ P ILA+NTS +D+N I T +VG HFFSPA+VM LLEIVR
Sbjct: 386 KQEVFGKLDAVAKPGAILATNTSYLDVNAIAASTSRPQDVVGLHFFSPANVMKLLEIVRA 445
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P + ++++ + I K P+VVG C GF NRM + L+ G IDR
Sbjct: 446 EKTAPDALATVVELARGIGKVPVVVGVCHGFVGNRMLAARGAESEALLLEGATPSQIDRV 505
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
T FG P+GPF++ DL G + N R ++I + E R G+ T G+
Sbjct: 506 FTDFGWPIGPFQMGDLAGLDIG-------WRNRKARGLTAVIADTLCEQGRFGQKTGSGW 558
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y D R SPDPEV+ I + G+A + +I+E +P+VNE ++
Sbjct: 559 YRYEDGSRDPSPDPEVENLIRAKAAEKGIAAR----AIDADEIIERTLYPLVNEGAKILE 614
Query: 480 EGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCYFDQ 528
E IA +A+D+D+ V G GFP + G + + L + Q
Sbjct: 615 EKIADRASDIDVVWVNGYGFPIGKGGPMFWAGLEGAGKIVERLEYWHGQ 663
>gi|374294040|ref|YP_005041063.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Azospirillum
lipoferum 4B]
gi|357427443|emb|CBS90387.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Azospirillum
lipoferum 4B]
Length = 707
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 173/504 (34%), Positives = 267/504 (52%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L+ PV GEEA ++GLVDAV + + A +L R +TD+I G
Sbjct: 162 MILSGDPVGGEEALTIGLVDAVEDDVSPLEAGLRTADRLLADGRMPEPVSARTDRIA--G 219
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+F RA+ K+ P L P +D VEA V G +E E F + S
Sbjct: 220 TDPALFTAKRAELAKRQPQLFSPHRIVDAVEAAVTLPFAEGTARERELFLACMDSPQRAG 279
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FFA+R +KVPG+ G R ++KV ++G G MG GIA + PV+L + +
Sbjct: 280 LIHAFFAEREVAKVPGLP-AGTPTREIRKVGVIGAGTMGGGIAMCFANAGIPVVLVDSAQ 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G +R N ++ +KG++T + E+ ++L+ L Y D D+V+EA E++ +
Sbjct: 339 EALDRGTAAIRRNYEATARKGRLTAAQVEERMALIRPTLSYGDLADADLVVEAAFESMEV 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ IF L+ C P ILA+NTST+D++ I T ++G HFFSPA+VM LLE+VR
Sbjct: 399 KRTIFRTLDDTCKPGAILATNTSTLDVDAIAAATGRPQDVLGMHFFSPANVMRLLEVVRG 458
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS V+ ++ + ++I K + VG C GF NR+ + + LVE G +DR
Sbjct: 459 ARTSDTVLATVMGLARRIGKVGVAVGVCYGFVGNRILHQRGRESMALVEEGASPEQVDRV 518
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+T+FG P+G F + DL G V + + + ++ E R G+ T G
Sbjct: 519 LTEFGFPLGHFSMTDLAGIDVGWRIREERRKAGDPEAQAPNWLDVLAERGRYGQKTSAGV 578
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R PDPEV IE+ R G+A P+ +S++++ E + +VNEA ++
Sbjct: 579 YRYEPGSRTPIPDPEVAAVIEEDRRNRGIA--PR--AVSDEEVRERCLYVMVNEAAKILE 634
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + D+D + G GFP +R
Sbjct: 635 EGIAARPVDIDAIWLHGYGFPSWR 658
>gi|410623226|ref|ZP_11334043.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410157148|dbj|GAC29417.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 707
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 168/482 (34%), Positives = 265/482 (54%), Gaps = 14/482 (2%)
Query: 26 NQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIV 85
++L S A +A +++E P V + D +E + +F ++ P
Sbjct: 182 DELQSAAMSFANEVVEKLMP-VKRVCDID-LEMSSDIETLFAQYSQGVAAKSKGFFAPGQ 239
Query: 86 CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPR 145
C+ V+A +AGL +EAE F + + + ++ H FFA+R S V G++ + R
Sbjct: 240 CVLAVKAAFTHDFKAGLAREAELFMECMTTSQARAQQHFFFAERAASHVQGISR-DVKAR 298
Query: 146 RVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQ 205
+K+ A++G G MG GIA + PVI+ E+ + L+ G+ +R N ++ KKGK+T
Sbjct: 299 DIKQAAVIGAGTMGGGIAMNFANAGIPVIMLELQQAALDKGLALIRRNYENSAKKGKLTS 358
Query: 206 EKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTI 265
E+ E+ + LLTG Y D D+VIEA+ E +S+K+++F+ L+K C P ILASNTST+
Sbjct: 359 EQVEQRMLLLTGTTSYADLSDADLVIEAVFEKMSVKKEVFSMLDKVCKPGAILASNTSTL 418
Query: 266 DLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVV 325
DLN I ++G HFFSPA+VM LLEIVR +TS +VI + + K I+K ++V
Sbjct: 419 DLNEIAASISRPQDVIGLHFFSPANVMKLLEIVRGEKTSDEVIKTAMKLAKTIRKVGVLV 478
Query: 326 GNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAI-- 383
G C GF NRM PY + A L+ G +DR I KFG+PMGPF + D+ G +
Sbjct: 479 GVCFGFVGNRMIEPYGREANRLMLEGATPEQVDRVIGKFGLPMGPFTMGDMAGLDIGYFV 538
Query: 384 -ATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-RRKASPDPEVKKFIEK 441
+ +FI + P ++ + R G KG YLY+ R PDP+V + ++
Sbjct: 539 RESRREFIAHDPSYC---IVADKLVAQGRVGLKVGKGAYLYEHGSRHPIPDPDVIEMAKQ 595
Query: 442 ARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPP 501
G+ + ++S+++I+E +P++NE + EGIA K++D+D+ V G GFP
Sbjct: 596 EAKRLGI----EQREISDQEILERCIYPLINEGADILKEGIAAKSSDIDVIYVYGYGFPV 651
Query: 502 YR 503
+R
Sbjct: 652 FR 653
>gi|154252397|ref|YP_001413221.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Parvibaculum
lavamentivorans DS-1]
gi|154156347|gb|ABS63564.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Parvibaculum
lavamentivorans DS-1]
Length = 692
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 273/505 (54%), Gaps = 18/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + V ++ +GLVD + +L A +A I+ +RP +DK+E
Sbjct: 155 MVTSGSHVGAKKCLEMGLVDELTEEGKLRDGAIAFAKKIVAEKRPLKRVRDLSDKVEAAR 214
Query: 61 EAREIF-KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
EIF +F +A ARK L P I +EA V G++ E + F++L+
Sbjct: 215 GKPEIFSEFRKANARKFRGFLA-PEYNIQCIEAAVNLPFDEGIKVEQKLFRELVTGTQSA 273
Query: 120 SLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+ H+FFA+R K+P V D P V KV I+G G MG GIA + PV + E
Sbjct: 274 AQRHVFFAERQVWKLPDVPADTPTIP--VNKVGIIGAGTMGGGIAMNFLNVGLPVTIVET 331
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
++ L+ GI +R N ++ KKG+ + E+ EK + LLTG L+ E+ D D+VIEA+ EN+
Sbjct: 332 KQEALDRGIATIRKNYENSAKKGRFSMEEVEKRMGLLTGSLEMEALADSDLVIEAVFENM 391
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+Q+F+ L+ ILA+NTS ++++ I + ++G HFFSPA+VM LLE+V
Sbjct: 392 DVKKQVFSKLDAIVKQGAILATNTSALNIDEIATAVKRPEAVIGLHFFSPANVMRLLEVV 451
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R ++TS VI + + KKI K +VG C GF NR+ + A L+ G + +D
Sbjct: 452 RADKTSKPVIATSMQLAKKIGKIAALVGVCPGFVGNRILAQRQREAQKLILEGAMPWDVD 511
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
R + FG+PMGPF ++DL G + + E++ + I ++ E R G+ T
Sbjct: 512 RVLYDFGLPMGPFAMSDLAGLDIGWSK---------EKSQGATIRDVLCEMDRRGQKTGA 562
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY YDE R A P P V+K I G+ K+S+ +I+E +P++NE ++
Sbjct: 563 GFYDYDENRNAKPSPVVEKIILDFAQKKGI----NRRKISDDEILERCIYPMINEGAKIL 618
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EG A++++D+DI + G GFP YR
Sbjct: 619 EEGKAIRSSDIDIVWINGYGFPVYR 643
>gi|407976062|ref|ZP_11156964.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
[Nitratireductor indicus C115]
gi|407428563|gb|EKF41245.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
[Nitratireductor indicus C115]
Length = 690
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 174/501 (34%), Positives = 270/501 (53%), Gaps = 17/501 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++++ KP+ +EA SLG VD + A L S A +A + L P ++DK++
Sbjct: 152 IIVSGKPIGMDEAFSLGAVDRI-AEGDLKSEAISFAREKLAEEAPHHHIRERSDKLQIDD 210
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A F+ A Q ++A LT P+ + V V A L +E E F + + SE +
Sbjct: 211 AA---FETAIEQVARKARGLTAPVKAAESVRNAVTMEFGAALAREREIFLERVASEESAA 267
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
H+FFA R +KV GV + R V ++ ++G G MG GIA A PV L E+N+
Sbjct: 268 QRHLFFATREAAKVRGVGR-DIEARPVARIGVIGAGTMGGGIAMAFANGGLPVTLLEMND 326
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L G+ ++ N VK+G +++++ ++ + G Y++ D+VIEA+ E + +
Sbjct: 327 EALARGLHQIDRNYAGSVKRGSISEDEKTARLARIQGTTSYDALAGCDLVIEAVFEKMDV 386
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+Q+F L+K P ILA+NTS +D+N I T +VG HFFSPAH+M LLEIVR
Sbjct: 387 KRQVFGALDKVLKPGAILATNTSYLDVNEIAAVTSRPQDVVGLHFFSPAHIMKLLEIVRG 446
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++T+P V+ L + ++I K P+VVG C GF NRM + L+ G +D+
Sbjct: 447 DRTAPDVLATALALARRIGKVPVVVGVCNGFVGNRMLAARREQNEALLLEGATPAQVDKV 506
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
T+FG PMGPF++ADL G +A + P I + E G+ + +GF
Sbjct: 507 FTQFGWPMGPFQMADLSGLDIAWNNRKSLGQTAP-------IADALCEAGHFGQKSGRGF 559
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R PDP+V+ IE+ + GV + + ++I+E +P++NE R+
Sbjct: 560 YLYEDGARIPIPDPDVQALIERKAAELGV----ERRSIDAEEIIERTLYPMINEGARILE 615
Query: 480 EGIAVKAADLDIASVMGMGFP 500
EGIA +A+D+D+ V G GFP
Sbjct: 616 EGIATRASDIDVVWVNGYGFP 636
>gi|254466277|ref|ZP_05079688.1| peroxisomal bifunctional enzyme [Rhodobacterales bacterium Y4I]
gi|206687185|gb|EDZ47667.1| peroxisomal bifunctional enzyme [Rhodobacterales bacterium Y4I]
Length = 706
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 151/404 (37%), Positives = 243/404 (60%), Gaps = 8/404 (1%)
Query: 101 GLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGS 160
GL++E E F +L+ S+ + L+H FF++R SK+P + G+APR V + ++GGG MG+
Sbjct: 255 GLKRERELFMELMDSDQRQGLIHAFFSERAVSKLPELD--GVAPREVASMGVIGGGTMGA 312
Query: 161 GIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK-TISLLTGVL 219
GIATA +L+ PV+L E+ ++ + A GR+ NL+ +K+GK++ ++++ T LT
Sbjct: 313 GIATAALLAGLPVVLIEMTDEAVTAARGRIEGNLKGALKRGKISPAQYDQLTGEALTVAT 372
Query: 220 DYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDR 279
DY + DVD+V+EA+ E++ +K+++F L+ +C P +LA+NTS +D++ I T +
Sbjct: 373 DYAALSDVDLVVEAVFEDMGVKREVFGKLDAHCKPGAVLATNTSYLDVDEIAAATSRPED 432
Query: 280 IVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFP 339
++G HFFSPAHVM LLE+V +T+P+V+ +GK++KK + G C GF NR+
Sbjct: 433 VIGLHFFSPAHVMKLLEVVVAEKTAPEVLATGFALGKRLKKVAVRSGICDGFIGNRIMNA 492
Query: 340 YTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK 399
Y +AA +V G Y +D+ +T FG PMGPF + DL G + A + R
Sbjct: 493 YRKAAEYVVLDGASPYQVDKVVTGFGFPMGPFAMGDLAGLDINWAARKRRAPTRDPRERV 552
Query: 400 SMIIPIMQEDKRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLS 458
++ E G+ T KGFY+Y+E RR P+PEV I K + GV+ P+ + S
Sbjct: 553 PRFYEMLCEGGDFGQKTGKGFYIYEEGRRGGVPNPEVAALIAKDQEQQGVS--PR--EFS 608
Query: 459 EKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
+ +++ +VNEA +V EGIA + D+D+ + G GFP +
Sbjct: 609 DAEVLRRYMCAMVNEASKVVGEGIARRPLDVDMVMLFGYGFPRF 652
>gi|56695674|ref|YP_166025.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
gi|56677411|gb|AAV94077.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Ruegeria pomeroyi DSS-3]
Length = 698
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 181/509 (35%), Positives = 270/509 (53%), Gaps = 21/509 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA--PNQLVSTARQWALDILEHRRPWVATLYKTDKIEP 58
M+ T + V+ +EA LG++D V P ++ + + LD RRP V + ++
Sbjct: 151 MITTGRHVRADEALRLGVIDRVAEGEPREIGLSYLRELLDEGAPRRP-VGEMPAPAPVD- 208
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGP-RAGLQKEAEDFQKLLRSET 117
F A ++ P + V+A + AGL++E E F +L+ S+
Sbjct: 209 -------FDAIYAAVLRKGRGQLSPATAVRAVQAACEAESFAAGLKRERELFMELMNSDQ 261
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+ L+H FFA R K+P + G+APR + + ++GGG MG+GIATA +LS V + E
Sbjct: 262 REGLIHAFFADRAVGKLPELE--GVAPRPLAAIGVIGGGTMGAGIATAALLSGLSVTMLE 319
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK-TISLLTGVLDYESFKDVDMVIEAIIE 236
+ + EA GR+ NL +K+GK+T ++F+ T LT +DY++ D D+VIEA+ E
Sbjct: 320 MTPEAAEAAKGRIEGNLSGALKRGKLTAQQFDNLTTKALTLAIDYDALADADLVIEAVFE 379
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++ +K+Q+F L+ C P +LASNTS +D+N I T ++G HFFSPAHVM LLE
Sbjct: 380 DMEVKKQVFTKLDAVCKPGAVLASNTSYLDINQIAAVTSRPQDVLGLHFFSPAHVMKLLE 439
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+V +QT+P V +GK++ K + G C GF NR+ Y A ++ G Y
Sbjct: 440 VVIADQTAPDVAATGFALGKRLGKVSVRAGVCDGFIGNRILSVYRTCADHMILDGASPYQ 499
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTYKSMIIPIMQEDKRAGET 415
ID A+ +FG MGPF +ADL G + A + E R S + E G+
Sbjct: 500 IDEALEEFGFAMGPFAVADLAGLDIGWAVRKRKRAEGLDPRARDSAYADKLCEAGHFGQK 559
Query: 416 TRKGFYLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T KG+Y Y KA P+PEV IE R+ G I P+ S+ +IV +VNEA
Sbjct: 560 TGKGYYDYAAGAKARVPNPEVLPLIEAERAQQG--ITPR--AFSKDEIVRRYMAAMVNEA 615
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+V EGIA + D+D+ + G GFP YR
Sbjct: 616 AKVVGEGIARRPLDVDVTLLYGYGFPRYR 644
>gi|443468142|ref|ZP_21058378.1| Enoyl-CoA hydratase [Pseudomonas pseudoalcaligenes KF707]
gi|442897219|gb|ELS24207.1| Enoyl-CoA hydratase [Pseudomonas pseudoalcaligenes KF707]
Length = 703
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 171/504 (33%), Positives = 271/504 (53%), Gaps = 11/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQ-LVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
MM++ +P+ A LGL+D + + + L+ AR +A ++L+ R P T + E +
Sbjct: 154 MMISGQPIGAGRAFELGLLDRLASGKESLLDDARAFARELLDQRAPAQRTSRFANPAESV 213
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
A + RA + + P + + VEA GL +E E F++ S+
Sbjct: 214 --AADFLSQFRAANEPRWKSRLAPRLVLAAVEAACNLPLAEGLVREHELFKEAEASKQSA 271
Query: 120 SLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+L H+FFA+R ++PG+ D+ L RR++KVA++G G MG GIA + + PV L E
Sbjct: 272 ALRHVFFAEREAGRIPGIEADIPL--RRIEKVAVIGAGTMGGGIAMNFVNAGIPVALLEQ 329
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ L+ G+ +R N + VK+GK+T + E+ + LL G LDY D D+VIEA+ E +
Sbjct: 330 KGEALDCGLANIRKNYEISVKRGKLTAAQLEQRMELLFGTLDYADLADADLVIEAVFEKL 389
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+KQQ+F +L++ C P ILASNTS++D+++I T ++G HFFSPA+VM LLE+V
Sbjct: 390 EIKQQVFRELDRLCKPGAILASNTSSLDVDVIAASTSRPQDVIGLHFFSPANVMRLLEVV 449
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R T+P V+ + I K+I K P++ G C GF NRM PY++ A LV G +D
Sbjct: 450 RGKATAPDVLATTMKIAKRIGKLPVISGVCFGFIGNRMLEPYSREAHRLVLEGATPTQVD 509
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+ +T + MG F + DL G V F + + R G+ T +
Sbjct: 510 KVLTDLDLNMGVFSMLDLAGIDVNFLVRNSNRAAFAHDESYCRLGDELYAQGRHGQKTGR 569
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFYLY+ R + D EV E+ V P + +++I + F ++NE ++
Sbjct: 570 GFYLYEGRNR-QEDYEVVALAERLAGELHVPRRP----VGDQEIHDRCLFMLINEGIQLL 624
Query: 479 AEGIAVKAADLDIASVMGMGFPPY 502
EGIA++A+D+D+ + G GFP +
Sbjct: 625 DEGIALRASDIDLVWINGYGFPAH 648
>gi|300704070|ref|YP_003745672.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum CFBP2957]
gi|299071733|emb|CBJ43057.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum CFBP2957]
Length = 693
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/439 (37%), Positives = 248/439 (56%), Gaps = 7/439 (1%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
+FAR A N P C+D V+A V G+Q E + F +L+ + ++L H F
Sbjct: 212 LQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIQFERDLFIELVNTTESRALRHAF 271
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
F +R K+P V + R+V+KVA++G G MG GI+ + + PV + E ++ L+
Sbjct: 272 FGERAAGKIPDVPE-DTPVRKVEKVAVIGAGTMGGGISMNFLNAGIPVTILETRQEALDR 330
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
GI +R N ++ KKGK+TQEK E ++LL L Y+ +D D+VIEA+ E++ +K+ +F
Sbjct: 331 GIATIRKNYENSAKKGKLTQEKVEARMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVF 390
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR T+
Sbjct: 391 KKLDEVAKPGAILASNTSTLDVDRIAGFTKRAQDVVGMHFFSPANVMKLLEVVRGKATAK 450
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
V+ ++ K IKKT +V G C GF NRM Y++ A L++ G +DRA+ FG
Sbjct: 451 DVLATVMKTAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAMETFG 510
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYD- 424
MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+Y Y
Sbjct: 511 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKV 569
Query: 425 ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
RK P EV + I + G+A K+S+ +IVE + + +VNE ++ EGIA
Sbjct: 570 GDRKPYPSQEVNEMIVQHSKDLGIA----RRKISDDEIVERLVYALVNEGAKILEEGIAS 625
Query: 485 KAADLDIASVMGMGFPPYR 503
KA+D+D+ + G GFP +R
Sbjct: 626 KASDIDMVYLTGYGFPLFR 644
>gi|393776994|ref|ZP_10365288.1| 3-hydroxybutyryl-CoA epimerase [Ralstonia sp. PBA]
gi|392716351|gb|EIZ03931.1| 3-hydroxybutyryl-CoA epimerase [Ralstonia sp. PBA]
Length = 698
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/425 (39%), Positives = 243/425 (57%), Gaps = 13/425 (3%)
Query: 83 PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSK---VPGVTD 139
P+ CI+ +EA V AGL+ E E F LL + ++L H FF +R K VP T
Sbjct: 234 PLKCIEALEAAVRLPFEAGLKVEREAFLFLLTTPESRALRHAFFGERAAGKIADVPSATP 293
Query: 140 LGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVK 199
+ R + KVA++G G MG+GIA + + PV L E ++ LE G+ +R N S V+
Sbjct: 294 V----RDIHKVAVIGAGTMGAGIAMTFLSAGLPVTLLEARQEALERGVATIRKNYDSTVR 349
Query: 200 KGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILA 259
KGK+++EK E+ ++LL LDY + D D+VIEA+ E++ +K+ +F L+ P ILA
Sbjct: 350 KGKLSEEKAERAMALLQTTLDYAAIADADLVIEAVFEDMGVKETVFRQLDAVMKPGAILA 409
Query: 260 SNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIK 319
SNTST+DLN I T +VG HFFSPA+VM LLE+VR QT V+ ++ + K ++
Sbjct: 410 SNTSTLDLNAIAGFTTRPQDVVGLHFFSPANVMKLLEVVRGAQTGKDVLATVMKLAKTLR 469
Query: 320 KTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGF 379
KT +V G C GF NRM Y + A L++ G ID AI +FG MGPFR+ DL G
Sbjct: 470 KTAVVSGVCDGFIGNRMVEQYVRQAGFLLDEGCTPQQIDSAIERFGFAMGPFRMCDLAGN 529
Query: 380 GVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKASPDPEVKKF 438
+ A + ++ P+ Y S + R G+ T G+Y Y R A P P V
Sbjct: 530 DIWQAIRTRKLQEHPDLAY-STTADQLCALGRFGQKTGAGWYDYVPGDRTAHPSPVVAGL 588
Query: 439 IEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMG 498
+ K + SGV P+ ++S+++IVE + + +VNE + EGIA KA+D+D+ + G G
Sbjct: 589 LAKHVAASGV---PQ-RQVSDEEIVERLVYALVNEGAAILEEGIAAKASDIDMVYLTGYG 644
Query: 499 FPPYR 503
FP +R
Sbjct: 645 FPLHR 649
>gi|83748601|ref|ZP_00945620.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum
UW551]
gi|207743140|ref|YP_002259532.1| trifunctonal protein: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
IPO1609]
gi|83724725|gb|EAP71884.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum
UW551]
gi|206594537|emb|CAQ61464.1| trifunctonal protein: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
IPO1609]
Length = 693
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/439 (37%), Positives = 249/439 (56%), Gaps = 7/439 (1%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
+FAR A N P C+D V+A V G+Q E + F +L+ + ++L H F
Sbjct: 212 LQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIQFERDLFIELVNTTESRALRHAF 271
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
F +R K+P V + R+V+KVA++G G MG GI+ + + PV + E ++ L+
Sbjct: 272 FGERAAGKIPDVPE-DTPVRKVEKVAVIGAGTMGGGISMNFLNAGIPVTILETRQEALDR 330
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
GI +R + ++ KKGK+TQEK E ++LL L Y+ +D D+VIEA+ E++ +K+ +F
Sbjct: 331 GIATIRKSYENSAKKGKLTQEKVEARMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVF 390
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR T+
Sbjct: 391 KTLDEVVKPGAILASNTSTLDVDRIAGFTKRAQDVVGMHFFSPANVMKLLEVVRGKATAK 450
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
V+ ++ K IKKT +V G C GF NRM Y++ A L++ G +DRA+ KFG
Sbjct: 451 DVLATVMKTAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAMEKFG 510
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYD- 424
MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+Y Y
Sbjct: 511 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKV 569
Query: 425 ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
RK P EV I + G+A K+S+++IVE + + +VNE ++ EGIA
Sbjct: 570 GDRKPYPSQEVNDMIVQHSKDLGIA----RRKISDEEIVERLVYALVNEGAKILEEGIAS 625
Query: 485 KAADLDIASVMGMGFPPYR 503
KA+D+D+ + G GFP +R
Sbjct: 626 KASDIDMVYLTGYGFPLFR 644
>gi|13473557|ref|NP_105125.1| enoyl-CoA hydratase [Mesorhizobium loti MAFF303099]
gi|14024307|dbj|BAB50911.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium
loti MAFF303099]
Length = 689
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/502 (33%), Positives = 262/502 (52%), Gaps = 20/502 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ P+ +EAH GLVDAV L + A +A +I P+ D+ E LG
Sbjct: 152 MIVSGTPIGADEAHEAGLVDAVF-EGDLTTHAVNFAGEIARKGGPFTPV---RDRDERLG 207
Query: 61 EAR-EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
E F A ++A L P+ C V V L E F KL+ S+ +
Sbjct: 208 ETDLAAFDAEAADLARKARGLEAPVACAQAVRNAVTLPFDEALAAERALFVKLVASDQSR 267
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ H+FFA+R +K+P RR+ +V ++G G MG GIA A + V L E +
Sbjct: 268 AQRHLFFAEREAAKLPAKDTY---KRRIARVGVIGAGTMGGGIAMAFANGGFSVTLLETS 324
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L+ G+G + N V +G + ++ + ++ G DY + D++IEA+ E+++
Sbjct: 325 AEALQRGLGTIEKNYAVSVSRGSLAEDAKHQRLAQFKGSTDYADLAECDLIIEAVFEDMA 384
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+++F L+ P ILA+NTS +D+N I ++G HFFSPA+VM LLEIVR
Sbjct: 385 VKKEVFGKLDAVAKPGAILATNTSYLDINEIAGSISRPQDVLGLHFFSPANVMKLLEIVR 444
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
++T+P + ++D+ ++I K +VVG C GF NRM + L+ G ID+
Sbjct: 445 ADKTAPDALATVIDLARRIGKVAVVVGVCHGFVGNRMLAARGSESEALLLEGATPSQIDK 504
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
A T FG PMGPF++ DL G + N R ++I + E R G+ T +G
Sbjct: 505 AFTDFGWPMGPFQMGDLAGLDIG-------WRNRKARGLTAVIADTLCEQGRFGQKTGRG 557
Query: 420 FYLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
FYLY+ +A PDPEV+ I + G+A P+ +S +I+E +P+VNE ++
Sbjct: 558 FYLYEAGARAGIPDPEVEALIRDKAAERGIA--PR--AISADEIIERTLYPLVNEGAKIL 613
Query: 479 AEGIAVKAADLDIASVMGMGFP 500
E IA +A+D+D+ V G GFP
Sbjct: 614 EEKIAARASDIDVVWVNGYGFP 635
>gi|398383587|ref|ZP_10541655.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium sp. AP49]
gi|397724603|gb|EJK85068.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium sp. AP49]
Length = 691
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/508 (35%), Positives = 263/508 (51%), Gaps = 24/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+M PV A +GL+D + A QL + A A +L+ RP L D+ E L
Sbjct: 154 LMTAGGPVSARAAKEMGLIDELAAEGQLRADAIALAQRVLDEGRPL---LKVRDRTEKLD 210
Query: 61 EAR---EIF-KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
EAR EIF F +A ARK P I VEA + G+ E + F +L
Sbjct: 211 EARGKPEIFADFRKANARKFR-GFNAPEAIIRCVEAALELPFDDGMIFERQLFNELQADS 269
Query: 117 TCKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+ H+FFA+R +KV + D + P + KV ++G G MG GIA + PV L
Sbjct: 270 QSAAQRHVFFAERQAAKVDSLPADTPILP--IAKVGVIGAGTMGGGIAMNFANAGIPVTL 327
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E NE L G+ +R N ++ KKGKM E + + LLTG + E D D++IEA+
Sbjct: 328 VETNEDALFRGLRIIRGNYETTAKKGKMKPEDVDTRMGLLTGSIAMEDLADCDLIIEAVF 387
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +K+++F L++ P ILA+NTS +D++ I T + + G HFFSPA+VM LL
Sbjct: 388 EQIDVKREVFTRLDRIAKPGAILATNTSYLDIDDIAAATSRPNSVAGLHFFSPANVMKLL 447
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VRT T P++I + + K I K ++VGN GF NR+ A L+ G +
Sbjct: 448 EVVRTRDTKPEIIATAMKLAKTIGKIGVLVGNGYGFVGNRILAARNTQADQLILEGATPW 507
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D+ + FG MG F++ DLVG V P+ T + + I+ E R G+
Sbjct: 508 AVDKVLYDFGFAMGHFQMRDLVGLDVGWN---------PKTTSSANVREILNEMGRHGQK 558
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
T+ GFY YDE RK +P P + IE + G+ +S+ +I + I F +VNE
Sbjct: 559 TKGGFYDYDENRKQTPSPVAMQVIEDFAAKQGIV----RRDVSDAEIQDRILFAMVNEGA 614
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ EGIA +A+D+DI + G G+P YR
Sbjct: 615 RILDEGIASRASDIDIVWITGYGWPKYR 642
>gi|421745980|ref|ZP_16183806.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator HPC(L)]
gi|409775497|gb|EKN56977.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator HPC(L)]
Length = 693
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 273/507 (53%), Gaps = 18/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M++T PV E+ L D +V + L ++ AR H P V L +
Sbjct: 152 MIVTGNPVLSEKFAGTKLFDEIVDGDVLPAAIAFARNVGAASGPH--PKVRDLKVRHE-- 207
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A FA+ A N P C++ V A + GL+ E E F L+ +
Sbjct: 208 ---NAEGFLAFAKNTVAAVAKNFPAPGKCVEAVAASLKPFDE-GLRLEREGFMFLVNTPE 263
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L H FF +R SK+P V R+++KVA++G G MG GI+ + + PV + E
Sbjct: 264 SRALRHAFFGERAASKIPDVPS-DTPTRKIEKVAVIGAGTMGGGISMNFLNAGIPVTVLE 322
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ L+ G+ +R N ++ KKGK+TQEK E+ + LL+ L Y+ KD D++IEA+ E
Sbjct: 323 TKQEALDRGVATIRRNYENSAKKGKLTQEKVEQRMGLLSTTLSYDDIKDADLIIEAVFEE 382
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ +F L++ P ILASNTST+D+N I T +VG HFFSPA+VM LLE+
Sbjct: 383 MGVKETVFKKLDEVAKPGAILASNTSTLDVNKIASFTRRPQDVVGMHFFSPANVMKLLEV 442
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR ++T V+ ++ + KKIKKT +V G C GF NRM Y++ A L++ G +
Sbjct: 443 VRGDKTGKDVLATVMQVAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQV 502
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+AI KFG MGPFR+ DL G + A + P+ Y S ++ E R G+ T
Sbjct: 503 DKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVEKPDIQY-SKTADLLCEMGRFGQKTG 561
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y RK P+ +V + I + G+ K+S+++IVE + + +VNE +
Sbjct: 562 AGWYDYKPGDRKPYPNQQVNEMIVQHSKDLGIT----RRKISDEEIVERLVYALVNEGAK 617
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA KA+D+D+ + G GFP +R
Sbjct: 618 ILEEGIASKASDIDMVYLTGYGFPLHR 644
>gi|421602426|ref|ZP_16045030.1| 3-hydroxyacyl-CoA dehydrogenase, partial [Bradyrhizobium sp.
CCGE-LA001]
gi|404265468|gb|EJZ30544.1| 3-hydroxyacyl-CoA dehydrogenase, partial [Bradyrhizobium sp.
CCGE-LA001]
Length = 594
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/504 (34%), Positives = 274/504 (54%), Gaps = 15/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EA GL++ +V S + ++ +RP K+
Sbjct: 48 MIVGGDPIGAAEALKKGLIEEIV--EGPASGGEAFVRKLIAEKRPLRRLRDDDSKLAAAK 105
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K++ L P D V + GL+KE E F KL+ S+ K+
Sbjct: 106 ADRSIFTNAVAAMTKKSRGLEAPFAAADAVGCAIDLPFDEGLKKEREGFLKLVASDQSKA 165
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +K+ GV + G R V +VAILG G MG GIA + + PV L E E
Sbjct: 166 QRYAFFAEREANKIAGVPE-GTKGRPVNRVAILGAGTMGGGIAMSFANAGIPVTLIETAE 224
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K ++L+ G + E+ D D+VIEA+ E +++
Sbjct: 225 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALIEGKVGIENVGDADLVIEAVFETMAV 284
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L++Y P +LASNTS ++++ I + T ++G HFFSPA+VM L EIVR
Sbjct: 285 KKEVFGKLDQYAKPGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRA 344
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++T+P +V + I +KI K P VVG C GF NRM ++ + L+ G +D
Sbjct: 345 DKTAPDALVTAVTIARKIAKVPAVVGVCDGFVGNRMLAQRSKQSEKLLFEGALPQQVDAV 404
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 405 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 457
Query: 421 YLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ +A PDPEV+K I++ + + K +S+++I+E + +P+VNE ++
Sbjct: 458 YKYEAGSRAPMPDPEVEKLIDETL----LRLGRKKRVVSDEEILERMMYPMVNEGAKILE 513
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ + G G+P YR
Sbjct: 514 EGIAARPSDIDVVWLYGYGWPIYR 537
>gi|344174706|emb|CCA86516.1| fused 3-hydroxybutyryl-CoA
epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA
dehydrogenase [Ralstonia syzygii R24]
Length = 693
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/439 (37%), Positives = 247/439 (56%), Gaps = 7/439 (1%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
+FAR A N P C+D V+A V G++ E F +L+ + ++L H F
Sbjct: 212 LQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIRFERALFIELVNTTESRALRHAF 271
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
F +R SK+P V + R+V+ V ++G G MG GI+ + + PV L E ++ L+
Sbjct: 272 FGERAASKIPDVPE-DTPVRKVETVVVIGAGTMGGGISMNFLNAGIPVTLLETRQEALDR 330
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
GI +R N ++ KKGK+TQE E+ ++LL L Y+ KD D+VIEA+ E++ +K+ +F
Sbjct: 331 GIATIRKNYENSAKKGKLTQETVEERMALLKPTLSYDDIKDADLVIEAVFEDMGVKETVF 390
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR T+
Sbjct: 391 KQLDEVVKPGAILASNTSTLDVDRIAGFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAK 450
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
V+ ++ I K IKKT +V G C GF NRM Y++ A L++ G +DRAI KFG
Sbjct: 451 DVLATVMKIAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAIEKFG 510
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE 425
MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+Y Y
Sbjct: 511 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKA 569
Query: 426 -RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
RK P EV I + G+ K+S+++IVE + + +VNE ++ EGIA
Sbjct: 570 GDRKPYPSQEVNDMIVQHSKALGIT----RRKISDEEIVERLVYALVNEGAKILDEGIAS 625
Query: 485 KAADLDIASVMGMGFPPYR 503
KA+D+D+ + G GFP +R
Sbjct: 626 KASDIDMVYLTGYGFPLFR 644
>gi|119713641|gb|ABL97692.1| fatty oxidation complex alpha subunit [uncultured marine bacterium
EB0_39H12]
Length = 690
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 265/503 (52%), Gaps = 14/503 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MM + + V + H +GLVD + L A Q+A I+ +P V +KI+
Sbjct: 155 MMTSGEHVPANQCHDMGLVDEMADEANLEGDAIQFANRIVSEGKPLVKVRDADEKIKSDK 214
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+F R ++ P I +EA V G++ E + F KL+ +
Sbjct: 215 GNDALFADFRKSILRKTRGFLAPEYNIQCIEAAVNLPFEEGMKVEQDLFMKLMTGSQSAA 274
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
++FFAQR +K+P + + + + V I+G G MG GI+ PV + E ++
Sbjct: 275 QRYMFFAQRQVTKIPDI-EKETPLKEIGSVGIIGAGTMGGGISMNFANVGIPVTIIEQSQ 333
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ GI +R N ++ KG++T E+ E+ +SL+ G E+ D++IEA+ EN+ L
Sbjct: 334 ERLDKGISIIRKNYENTAAKGRITSEQVEERMSLINGQTSIEALNTQDLIIEAVFENMDL 393
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ IF L+ C ILASNTS +D+N I + T + ++G HFFSPA+VM LLEIVR
Sbjct: 394 KKDIFKQLDNICKEGAILASNTSALDVNEIADVTNRPEDVIGLHFFSPANVMKLLEIVRG 453
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TS V+ L + K+I+K VVG C GF NR+ + A L+ G + ID A
Sbjct: 454 DKTSKSVVASSLAVAKRIQKIAAVVGVCPGFVGNRILAQRQREANKLILEGALPWDIDDA 513
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG PMGPF ++DL G + E + + ++ E R G+ + KGF
Sbjct: 514 LFDFGFPMGPFAMSDLAGLDIGWNK---------ETSNGETLRDVLCEAGRLGQKSGKGF 564
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+YDE R SPDPEV+ I+K G + +S+++I+E +P++NE ++ E
Sbjct: 565 YVYDENRNKSPDPEVEALIKKF----GEERQIQMRDISKEEILERCLYPMINEGFKILEE 620
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+A++A+D+DI G G+P Y
Sbjct: 621 GMAIRASDIDIVWTNGYGWPVYE 643
>gi|409396617|ref|ZP_11247597.1| enoyl-CoA hydratase [Pseudomonas sp. Chol1]
gi|409118799|gb|EKM95190.1| enoyl-CoA hydratase [Pseudomonas sp. Chol1]
Length = 705
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/531 (34%), Positives = 278/531 (52%), Gaps = 23/531 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA--PNQLVSTARQWALDILEHRRPWVATLYKTDKIE- 57
M+++ +P+ EA +VD + P Q LD E RRP +T ++
Sbjct: 152 MIVSGQPITAAEALEHLIVDELFDGDPRAAALAYAQRLLD--EGRRP-----RRTGELSV 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
P ++ E+ A+ ++ P L P+ CI VEA GL++E + F + L S
Sbjct: 205 PGTDSAELIAARHAEVARRTPGLFAPLRCIAAVEAATRLPLAEGLERERQLFLECLHSPQ 264
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLA--PRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+LVH FFA+R K+ DL A PR + A++GGG MG GIA + PV L
Sbjct: 265 RAALVHAFFAERQAGKI---ADLPAATRPREIATAAVIGGGTMGVGIALCFANAGVPVKL 321
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
EV+++ L+ + R R V++G +++ + E+ ++L+ GV DY + +VD+V+EA+
Sbjct: 322 LEVSDEALQRALQRARDTCAVSVRRGSLSEAEMERRLALIAGVTDYAALAEVDLVVEAVF 381
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E++++KQQ+F L+ C P ILASNTS++DLN I T + +VG HFFSPA+VM LL
Sbjct: 382 EDMAVKQQVFERLDAVCKPGAILASNTSSLDLNQIAAFTRRPEDVVGLHFFSPANVMRLL 441
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR +TS V+ + IGK++KK +VVG C GF NRM F Y + A L+E G
Sbjct: 442 EVVRGARTSHAVLATAMAIGKRLKKVAVVVGVCDGFVGNRMLFQYGREAEFLLEEGATPQ 501
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D A+ FGM MGPF + DL G + A + P + + G+
Sbjct: 502 QVDGALRNFGMAMGPFAVRDLSGLDIGQAIRKRQRALLPAHLEFPTVADRLCAAGMLGQK 561
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T G+Y Y+ R +P + +E A G+ + L E+ IVE + +VNE
Sbjct: 562 TGVGYYRYEPGNRTPLENPALAPMLEAASREKGL----ERQTLDEQYIVERCLYALVNEG 617
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHR---GFSKSSSCFKNL 522
++ EGIA +A+D+D+ + G GFP +R H G +K + K L
Sbjct: 618 AKILEEGIAQRASDIDLIYLNGYGFPAWRGGPMFHADSVGLAKVLATVKEL 668
>gi|299066775|emb|CBJ37969.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum CMR15]
Length = 693
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 270/504 (53%), Gaps = 12/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ V E+ GL D ++ L++ A +AL + K + P G
Sbjct: 152 MIVSGTAVPSEQLAKSGLFDQMIE-GDLMAGAIGFALKAAAEGKLPKLRDRKVEHDNPEG 210
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+FAR A N P C+D V+A V G++ E + F L+ + ++
Sbjct: 211 ----FLQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIKFERDLFIALVNTTESRA 266
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H FF +R SK+P V + R+V+ VA++G G MG GIA + + PV + E +
Sbjct: 267 LRHAFFGERAASKIPDVPE-DTPVRKVETVAVIGAGTMGGGIAMNFLNAGIPVTILETKQ 325
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ GI +R N ++ KKGK+T EK E ++LL L Y+ +D D+V+EA+ E++ +
Sbjct: 326 EALDRGIATIRKNYENSAKKGKLTPEKVEARMALLKPTLSYDDIRDADLVVEAVFEDMGV 385
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F L+ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 KETVFKTLDAVAKPGAILASNTSTLDVDRIAGFTRRPQDVVGMHFFSPANVMKLLEVVRG 445
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
T+ V+ ++ + K IKKT +V G C GF NRM Y++ A L++ G +DRA
Sbjct: 446 KATAKDVLATVMKLAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRA 505
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ KFG MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+
Sbjct: 506 VEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRYGQKTGAGW 564
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y RK P EV I + G+ K+S+++IVE + F +VNE ++
Sbjct: 565 YDYKTGDRKPYPSQEVNDMILQHSKDLGIT----RRKISDEEIVERLVFALVNEGAKILE 620
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP +R
Sbjct: 621 EGIASKASDIDMVYLTGYGFPLFR 644
>gi|220925287|ref|YP_002500589.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium
nodulans ORS 2060]
gi|219949894|gb|ACL60286.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium
nodulans ORS 2060]
Length = 692
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 271/507 (53%), Gaps = 22/507 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+++ P+ ++A ++GLVD + + L + A +A ++ RP + D+ L
Sbjct: 155 VIVGGAPIGAKQAAAMGLVDEIAPEDSLRAHAVAFAERVVAEGRPLTRIRDREDR---LA 211
Query: 61 EARE---IFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
E R+ +F R + ++ P CI V+A GL E E F KL+
Sbjct: 212 EGRDDPGLFDAFRRENARRLRGFEAPEACIACVQAACTLPFDQGLAFEREQFLKLVSGSQ 271
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+ ++FFA+R T+++P V + R + KV ++G G MG GI+ + + PV + E
Sbjct: 272 SAAQRYVFFAERQTARIPDVPE-DTPTRPIAKVGVIGAGTMGGGISMNFLNAGIPVTIVE 330
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L+ G+G +R+N ++ +KG++ E E + LLT L+ E+ K D++IEA+ E+
Sbjct: 331 TKREALDRGLGIIRSNYETTARKGRLRPEDVETRMGLLTDTLELEALKGCDLIIEAVFED 390
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ IF+ L++ P ILASNTS +D++ I T ++G HFFSPA+VM LLE+
Sbjct: 391 MGIKKDIFSRLDRIAKPGAILASNTSYLDIDEIASVTSRPGDVIGMHFFSPANVMRLLEV 450
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR +T VI + IG+ I K P++VG C GF NRM + A L+ G + +
Sbjct: 451 VRGARTERDVIATAMQIGRTIGKIPVLVGVCHGFVGNRMLAERQREANRLILEGVKPWDV 510
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMII-PIMQEDKRAGETT 416
DR I +FG+PMGPF ++DL G + + T KS + ++ E R G+ T
Sbjct: 511 DRVIYEFGLPMGPFAMSDLAGLDI----------GWSRETNKSESVRDLLCERDRRGQKT 560
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
GFY YD +R A P ++ I GV + S+++I+E +P+VNE +
Sbjct: 561 GAGFYDYDAKRNAMPSAVTEEIIATVAERQGV----RRKAASDQEILERCLYPMVNEGAK 616
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EG A++A+D+DI + G G+P YR
Sbjct: 617 ILDEGKAIRASDIDIVWINGYGWPVYR 643
>gi|421897544|ref|ZP_16327912.1| trifunctonal protein: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
MolK2]
gi|206588750|emb|CAQ35713.1| trifunctonal protein: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
MolK2]
Length = 693
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 165/439 (37%), Positives = 248/439 (56%), Gaps = 7/439 (1%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
+FAR A N P C+D V+A V G+Q E + F +L+ + ++L H F
Sbjct: 212 LQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIQFERDLFIELVNTTESRALRHAF 271
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
F +R K+P V + R+V+KVA++G G MG GI+ + + PV + E ++ L+
Sbjct: 272 FGERAAGKIPDVPE-DTPVRKVEKVAVIGAGTMGGGISMNFLNAGIPVTILETRQEALDR 330
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
GI +R N ++ KKGK+TQEK E ++LL L Y+ +D D+VIEA+ E++ +K+ +F
Sbjct: 331 GIATIRKNYENSAKKGKLTQEKVEARMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVF 390
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR T+
Sbjct: 391 KTLDEVVKPGAILASNTSTLDVDRIAGFTRRAQDVVGMHFFSPANVMKLLEVVRGKATAK 450
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
V+ ++ K IKKT +V G C GF NRM Y++ A L++ G +DRA+ KFG
Sbjct: 451 DVLATVMKTAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAMEKFG 510
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYD- 424
MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+Y Y
Sbjct: 511 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKV 569
Query: 425 ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
RK P EV I + +A K+S+++IVE + + +VNE ++ EGIA
Sbjct: 570 GDRKPYPSQEVNDMIVQHSKDLCIA----RRKISDEEIVERLVYALVNEGAKILEEGIAS 625
Query: 485 KAADLDIASVMGMGFPPYR 503
KA+D+D+ + G GFP +R
Sbjct: 626 KASDIDMVYLTGYGFPLFR 644
>gi|383643635|ref|ZP_09956041.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas elodea ATCC 31461]
Length = 674
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/503 (33%), Positives = 264/503 (52%), Gaps = 21/503 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M P+ +A GLVD + + L++ A +A ++ + P+
Sbjct: 151 MATKGDPIPAVQAKEAGLVDRLAGEDSLLADAVAFANEV-------IGKPVSRSSERPVT 203
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E F RA K+ L P ID++E G+Q E F KL+ + +
Sbjct: 204 VDAETFAKFRAANAKRFRGLDAPNTIIDIIEQTAGKPYAEGVQAERMGFMKLIMGQQSAA 263
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L HIFFA+R +K+ G+ D + R +++V ++G G MG GI+ + + PV + E+ +
Sbjct: 264 LRHIFFAERKAAKIDGIAD-DIQLRDIRRVGVIGAGTMGGGISMNFLSAGVPVTIVEMAQ 322
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G G +R N ++ KG+MT E+ EK + LL L+++ + D++IEA+ E++ +
Sbjct: 323 EALDRGTGVMRKNYEASAAKGRMTAEQVEKAMGLLKPTLNFDDLAECDLIIEAVYESMDV 382
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F L+ P ILASNTS ++++ I T +VG HFFSPA+VM LLEIVR
Sbjct: 383 KKDVFGRLDTIAKPGAILASNTSYLNIDEIAAATSRPQDVVGLHFFSPANVMKLLEIVRG 442
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+ V+ + + KKIKK ++ G C GF NRM P A ++ G ID+
Sbjct: 443 AKTADDVLATAMALSKKIKKVAVIAGVCYGFIGNRMLMPRQVEATKMLLEGATPEQIDKV 502
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
FGMPMGPF++ADL G + IEN I + + R G+ GF
Sbjct: 503 HVAFGMPMGPFQMADLAGVDIGWHRDPNRIEN---------IRDALAAEGRWGQKKGAGF 553
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y YDE+R+ S P V + IE+ R V P +++E++IV + +VNE + AE
Sbjct: 554 YDYDEKRQPSNSPRVAELIEEWRGKLNV---PSH-EITEEEIVVRTLYTMVNEGALILAE 609
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+A +A+D+D+ V G G+PPYR
Sbjct: 610 GMAQRASDIDVVWVYGYGWPPYR 632
>gi|163793451|ref|ZP_02187426.1| Enoyl-CoA hydratase [alpha proteobacterium BAL199]
gi|159181253|gb|EDP65768.1| Enoyl-CoA hydratase [alpha proteobacterium BAL199]
Length = 702
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 172/505 (34%), Positives = 261/505 (51%), Gaps = 11/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + + V EEA LG+VDA++ + + +A ++ + L D+ L
Sbjct: 152 MITSGRHVPVEEAADLGIVDAIIDTKDVKAAGIAFAQRVIAE---GLTALPVRDRDGKLA 208
Query: 61 EAR---EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
EAR +F AR + K A L P C+D VEA V GL++E E FQ+ + S
Sbjct: 209 EARADRSVFADARKKLEKSARGLFSPFRCVDAVEAAVDLPIDDGLKRERELFQQCMESPQ 268
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+ +H+FF +R +KVPG++ + R V K A++G G MG GIA + PV + E
Sbjct: 269 RAAQIHVFFGEREVAKVPGMSK-DITARPVNKAAVIGAGTMGGGIAMCFANAGIPVTVVE 327
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L+ G+ RVR+N K+G+MT + E ++L+T LD D D++IEA+ E+
Sbjct: 328 TAQDALDRGLNRVRSNYDISAKRGRMTPDDVEARMALITPSLDLADLHDADLIIEAVFES 387
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+++FA L+K P +LA+NTS +D++ I T ++G HFFSPA+VM LLE+
Sbjct: 388 LDVKKEVFAKLDKIAKPGAVLATNTSYLDVDAIAAMTSRPADVLGMHFFSPANVMRLLEV 447
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR +T + L++G+K K +V G C GF NRM Y L+E G I
Sbjct: 448 VRGAKTDDDALRTALEVGRKFGKVAVVSGVCDGFIGNRMLRTYKTQMDYLLEDGALPQEI 507
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D AIT FG PMG + + DL G + T + P I + E R G+ T
Sbjct: 508 DAAITGFGFPMGLYAMGDLAGLDIGYMTRRREDATRPADARYVAIADRLYEKGRLGQKTG 567
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y++ R PDPEV I + G+ P + +I +VNE +V
Sbjct: 568 AGWYRYEDGRTPIPDPEVDAIILEESQKKGINRRP----FTVDEIQTRALCALVNEGAKV 623
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EGIA++ D+D+ + G GFP +
Sbjct: 624 LGEGIALRPVDIDMVWLFGYGFPSW 648
>gi|86140265|ref|ZP_01058826.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Roseobacter sp. MED193]
gi|85823068|gb|EAQ43282.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Roseobacter sp. MED193]
Length = 697
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 177/508 (34%), Positives = 283/508 (55%), Gaps = 20/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA--PNQLVSTARQWALDILEHRRPWVATLYKTDKIEP 58
++ + + V +EA LG++D + P ++ Q L+ RRP V+ + + ++
Sbjct: 151 VITSGRQVGAKEALELGILDRIEEGEPREIGLAYTQELLESGATRRP-VSEMPAPEAVD- 208
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
F + K+ L P V + ++A G+++E E F +L+ ++
Sbjct: 209 -------FDALYEKVLKKGRGLLAPAVAVRGIQACCELPFDEGMKRERELFMELMNTDQR 261
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+ ++H FF++R SK+P + G+APR + + ++GGG MG+GIATA +LS PV++ E+
Sbjct: 262 QGMIHAFFSERAVSKLPELK--GVAPRELGSIGVIGGGTMGAGIATAALLSGLPVVMLEM 319
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK-TISLLTGVLDYESFKDVDMVIEAIIEN 237
E EA GR+ NLQ +K+GK+++ +F + T +LT DY + DVD+VIEA+ E
Sbjct: 320 TEAAAEAAKGRITGNLQGALKRGKISEAQFTQLTEEILTLSTDYAALSDVDLVIEAVFEE 379
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+S+K+ +F L++ C ILASNTS +D+N I T + ++G HFFSPAHVM LLEI
Sbjct: 380 MSVKKVVFGKLDEVCKKGAILASNTSYLDVNEIAACTSRPEDVIGLHFFSPAHVMKLLEI 439
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V ++T+ V+ +G+++KK + G C GF NR+ Y +AA ++ G Y I
Sbjct: 440 VVADKTALDVVATGFALGQRLKKISVRAGVCDGFIGNRILSTYRKAADHMILDGASPYQI 499
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
D+A+T FG MGPF +ADL G + A + E R S + M E G+ T
Sbjct: 500 DKALTDFGFAMGPFAVADLAGLDIGWAMRKRKRAEGMDPRERDSSYVDKMCEAGNFGQKT 559
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KG+Y+Y+ +R +P+PEV I R+ G I P+ ++++IV +VNEA
Sbjct: 560 GKGYYVYEAGKRGGTPNPEVSDLIAAERADKG--ITPR--SFTDEEIVTRYMAAMVNEAA 615
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
+V EGIA + D+D+ + G GFP YR
Sbjct: 616 KVVGEGIARRPLDVDMTLLFGYGFPRYR 643
>gi|381393975|ref|ZP_09919693.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379330247|dbj|GAB54826.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 682
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 174/489 (35%), Positives = 270/489 (55%), Gaps = 20/489 (4%)
Query: 21 AVVAPNQLVSTARQWALDILEHRRPWVA--TLYKTDKIEPLGEAREIFKFARAQARKQAP 78
++V P++L+ A + A + P + L + +IE L E ++ Q +A
Sbjct: 153 SIVEPSELLVQAIKVAKQAVGKVIPATSLIKLSSSPEIEALCEQTKV------QTSAKAR 206
Query: 79 NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVT 138
P CI+ V+A GL++E E F++ + + ++ H FFA+R +P +
Sbjct: 207 GFFAPAKCIEAVKAAFELPFAQGLKREGELFEECMHTPQARAQQHFFFAERVAGALPQIA 266
Query: 139 DLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRV 198
A R +K+VAI+G G MG GIA PV+L E+ + L+ G+ +R N ++
Sbjct: 267 K-DTALRDIKQVAIIGAGTMGGGIAMNFANVGIPVVLLELEQAALDKGLELIRRNYENSA 325
Query: 199 KKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCIL 258
KKGK+TQE+ E+ + LLTG Y+ +VD+VIEA+ E +S+K+Q+F L+K C P IL
Sbjct: 326 KKGKLTQEQVEQRMELLTGTTSYDDLSEVDLVIEAVFEKMSVKKQVFEALDKVCKPGAIL 385
Query: 259 ASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKI 318
ASNTST+DL+ I + T + ++G HFFSPA+VM LLEIV+ +T+ VI + + K I
Sbjct: 386 ASNTSTLDLDEIAQCTSREQDVIGLHFFSPANVMKLLEIVQGAKTADDVIKTAMHLAKTI 445
Query: 319 KKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVG 378
KK ++VG C GF NRM Y + A L+ G ID+ I FG+PMGPF + D+ G
Sbjct: 446 KKVGVLVGVCFGFVGNRMIEVYGREAGRLMLEGATPQQIDKVIYDFGLPMGPFTMGDMAG 505
Query: 379 FGVAI---ATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-RRKASPDPE 434
+ + +FI + P +Y ++ ++ E R G KG YLYD R PDP
Sbjct: 506 LDIGYFVRQSRKEFISHDP--SYCTVADELV-EAGRVGLKAGKGVYLYDAGSRSPIPDPS 562
Query: 435 VKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASV 494
V ++ G+ + +S+++I+E +P++NE + EGIA +A+D+D+ V
Sbjct: 563 VLDIAKRKAKELGI----QRRDISDQEILERCIYPLINEGANILLEGIAQRASDIDVIYV 618
Query: 495 MGMGFPPYR 503
G GFP YR
Sbjct: 619 YGYGFPVYR 627
>gi|398812807|ref|ZP_10571521.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
gi|398076521|gb|EJL67581.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
Length = 700
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 270/507 (53%), Gaps = 18/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++L+ P+K AH LGLV+AV+ +L++ AR +A ++ L +EP G
Sbjct: 155 IILSGAPIKAPRAHELGLVNAVIM-GELLAGARAFARRVVAEGAAL--PLVAQRALEPAG 211
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
F R +A N T +D V+A GL +E F +L+ K+
Sbjct: 212 VD---FAERRRAVPARARNATAQRAAVDAVQASTQLALEDGLTRERALFDELVAGPESKA 268
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAP---RRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L H+FFA+R + P +++ LAP R V+KVA+LG G MG GIA A + PV+L E
Sbjct: 269 LRHLFFAER---EAPKLSET-LAPTELRVVRKVAVLGAGTMGGGIAMAFANAGIPVVLLE 324
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ ++ G+ VR N V KGK+++ ++L+ LD+ + DVD+VIEA+ E+
Sbjct: 325 REQAAIDRGLDLVRRNYGVTVAKGKLSEAAMAGRMALIEPALDFAALHDVDLVIEAVFED 384
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++K+++F L+ +C P ILA+NTS + ++ I T ++G HFFSPA+VM LLE+
Sbjct: 385 MAVKKEVFEQLDAHCKPGAILATNTSRLSIDEIARSTSRPQDVIGLHFFSPANVMRLLEV 444
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T P VI + + + I K P++V C GF NRM Y + A L+E G +
Sbjct: 445 VRGEGTLPAVIAACMKMAQDIGKIPVLVRVCEGFVGNRMLTGYWREAGFLLEEGASPQQV 504
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+T FGM MGP +ADL G + AT + P S + + E R G+ T
Sbjct: 505 DRAMTGFGMAMGPLAMADLAGMDINWATRKRLAPTRPAHLRYSKVADRICEAGRYGQKTS 564
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y+ R PDP V IE + +G+ + ++DIVE +VNE R
Sbjct: 565 AGYYRYEAGSRTPIPDPLVDMIIESCAAEAGIVRH----TVRDEDIVERCVLALVNEGVR 620
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EG+A +A+D+D+ V G GFP R
Sbjct: 621 ILDEGVAQRASDIDVVYVHGYGFPASR 647
>gi|114571197|ref|YP_757877.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Maricaulis maris MCS10]
gi|114341659|gb|ABI66939.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Maricaulis maris MCS10]
Length = 679
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 169/503 (33%), Positives = 268/503 (53%), Gaps = 18/503 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ P+ A +GLVD +VA +QL + +A + +++ +TDK++ +
Sbjct: 151 MIAKGDPIPAAAAERIGLVDKLVADDQLAESGIAFARSVSSATTHPISS-ARTDKLDTV- 208
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A + F R ++ P CI+ V A + G++KE E F KL+ ++
Sbjct: 209 LADDFFDNFRKTELRRLKGFEAPEACIEAVRAAIELPFAEGVKKERELFGKLVSGTQSRA 268
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H+FFA+R K+ + D + P + KV ILG G MG GIA + + V + E
Sbjct: 269 LRHVFFAERAAGKIDDIPADTPVLP--IAKVGILGAGTMGGGIAMNFLTAGIAVTILERE 326
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L+ G+ +R N + +GK T E+ E+ + LT LD D D+VIEA+ EN+
Sbjct: 327 QDPLDRGVSIIRKNYERSASRGKFTAEQVEQCMGRLTPTLDMNDLADCDLVIEAVFENMD 386
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+ +F L+ P ILASNTS ++++ + T + ++G HFFSPA+VM LLE+VR
Sbjct: 387 VKKDVFTKLDSIVKPGAILASNTSYLNVDEMAAMTKRPEFVLGLHFFSPANVMRLLEVVR 446
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+ SP V+ + + KK+ K +V G C GF NRM P QAA ++ +G + +D
Sbjct: 447 AEKASPAVLKTAMALAKKVGKVAVVSGVCHGFIGNRMLSPRQQAANAMLMQGITPWAVDD 506
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
A+T FGMPMGPF++ADL G + + + I ++ E R G+ KG
Sbjct: 507 ALTDFGMPMGPFQMADLAGLDLGWNR---------DASKGETIRDVLCERDRRGQKNGKG 557
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
FY YDE R+ +P EV++ I + SG A P+ S ++I + FP++NE ++
Sbjct: 558 FYDYDENRRRTPSAEVEEVIAAFVAKSGQA--PQ--SFSPEEIRNRLLFPMINEGAKILD 613
Query: 480 EGIAVKAADLDIASVMGMGFPPY 502
EG+A +A+D+D + G G+P Y
Sbjct: 614 EGMAQRASDIDTVWINGYGWPAY 636
>gi|393725326|ref|ZP_10345253.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas sp. PAMC 26605]
Length = 677
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 172/503 (34%), Positives = 265/503 (52%), Gaps = 19/503 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M P+ + A S GL+D + + L + A +A +I + R P K + +P
Sbjct: 152 MTAKGDPIPAKLALSAGLIDRLAGEDSLEADAIAFAREIADAR-PLPRAREKVAQADP-- 208
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EA FK A+ + I C++ G S G+ E ++F KL+ +
Sbjct: 209 EAVAAFKKDNAKRFRGFDAPAANIACVEKAADG--SSFDEGIAFERQEFMKLMMGVQSAA 266
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
HIFFA+R +K+ G+ D + R +K+V ++G G MG GI+ + + PV + E+ +
Sbjct: 267 QRHIFFAERQAAKIDGI-DANIQLREIKRVGVIGAGTMGGGISMNFLSAGIPVTIVEMAQ 325
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G G +R N ++ KG++ E+ E + L LD+E+ + D++IEA+ EN+ +
Sbjct: 326 EALDRGAGTIRKNYEASAAKGRLKSEQVEAAMGALNPTLDFEALAECDLIIEAVYENMEV 385
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ IF L+ P ILASNTS +D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 386 KKDIFTRLDAIAKPGAILASNTSYLDIDEIASVTKRPGDVVGMHFFSPANVMKLLEVVRG 445
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
QT V+ ++ + K IKK +V G C GF NRM P A L+ G IDR
Sbjct: 446 AQTDDDVLATVMALSKTIKKVAVVAGVCDGFIGNRMLKPRQVEAMKLLMEGATPEQIDRV 505
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
FGMPMGPF+++DL G + IEN I + + R G+ T KGF
Sbjct: 506 HVAFGMPMGPFQMSDLAGVDIGWHRDPNRIEN---------IRDALAAEGRWGQKTAKGF 556
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y YDE+R +P P V + IE RS S + + ++S+++IVE + +VNE + E
Sbjct: 557 YDYDEKRNPTPSPRVAEIIEDFRSKSNM----QKREISDQEIVEKTLYTMVNEGALILEE 612
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
+A +A+D+D+ + G G+P YR
Sbjct: 613 KMAQRASDIDVVWIYGYGWPVYR 635
>gi|15806500|ref|NP_295210.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Deinococcus radiodurans R1]
gi|6459246|gb|AAF11052.1|AE001993_2 enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Deinococcus radiodurans R1]
Length = 708
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 184/509 (36%), Positives = 274/509 (53%), Gaps = 24/509 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
MML+ P+K A LGLVD +V + L V+ AR A RP L + +
Sbjct: 168 MMLSGNPIKAPAAKELGLVDEIVDGDLLAGAVAFARAHA-----DARP----LPRVSERS 218
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
G + E+F AR +K P +D+ E + G EA+ F L S
Sbjct: 219 VEGGSPEVFAAAREGLKKTHRGQHSPSHIVDLAEMAATKPFQEGWDAEADRFVDSLNSPQ 278
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+ L HIFFA+R K+ G++ +K I+G G MG GIA + PV + E
Sbjct: 279 SRGLRHIFFAEREAGKIRGLSK-DTPTTDIKSAGIIGAGTMGGGIAMNFLNVGIPVTIVE 337
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+++ L+ G+G +R N ++ KKG+MTQ+ EK + LLT L E D++IEA+ EN
Sbjct: 338 TSQEALDRGLGVIRKNYENTAKKGRMTQDDVEKRMGLLTPTLKMEDLAGADIIIEAVFEN 397
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ IF L+K P ILASNTST+D+N I T ++++G HFFSPA+VM LLEI
Sbjct: 398 MDVKKDIFTRLDKIAKPGAILASNTSTLDVNEIASVTGRPEQVIGLHFFSPANVMKLLEI 457
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR ++TS V+ L + K+IKK +VVG C GF NRM Y A +VE G +
Sbjct: 458 VRADKTSDSVLATSLALAKRIKKVGVVVGVCDGFVGNRMVHRYGDEARKIVEEGARPEDV 517
Query: 358 DRAITKFGMPMGPFRLADLVGF--GVAIATGMQFIENFPE-RTYKSMIIPIMQEDKRAGE 414
D A+ G+PMGPF+++D+ G G +I + PE + I+ + R G+
Sbjct: 518 DAAMNALGLPMGPFQMSDMAGLDIGYSIRQHQAKVRGEPEPDGWLDRIV----KTGRKGQ 573
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T+ G Y Y E RK P+ +V+K IE R+ G + ++S+++I + + + +VNE
Sbjct: 574 KTQGGIYDYGEDRKPKPNADVQKLIEDYRAEQGT----QSREISQEEITKRLAYSLVNEG 629
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ EGIA +A+D+D+ + G GFP YR
Sbjct: 630 AKILEEGIAQRASDIDVIYIYGYGFPAYR 658
>gi|90423729|ref|YP_532099.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas
palustris BisB18]
gi|90105743|gb|ABD87780.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodopseudomonas palustris BisB18]
Length = 697
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 273/504 (54%), Gaps = 16/504 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ EA GL+D +V + +A +L +R K++
Sbjct: 152 MIVGGDPIGAAEALQHGLIDEIV--EATAAGGEAFARKVLAEQRGLRRLRDDDSKLQAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K+A L P D V A + GL++E + F KL+ E K+
Sbjct: 210 TDRSIFTQAVASMTKKARGLEAPFAAADAVGAAIDLPFDEGLKQERDGFMKLVTGEQSKA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +KV V D G PR V +VAI+G G MG GIA + + PV L E E
Sbjct: 270 QRYAFFAEREAAKV-SVPD-GTKPRPVARVAIIGAGTMGGGIAMSFANAGIPVTLIETGE 327
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N + +G + + K ++L+ GV+ E KD D+VIEA+ E +++
Sbjct: 328 QQLKRGLGVMQKNYDATAARGGIPADAPAKRMALINGVVGLEHVKDADLVIEAVFETMAV 387
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F ++ Y P +LASNTS ++++ I + T + ++G HFFSPA+VM L EIVR
Sbjct: 388 KKEVFTAIDAYAKPGAVLASNTSYLNIDEIAQVTKRPEDVLGMHFFSPANVMKLCEIVRA 447
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++T+P ++ + I +KI K P VVG C GF NRM + A L+ G +D
Sbjct: 448 DKTAPDALLTAVAIARKIAKVPAVVGVCDGFVGNRMLAARGKQAERLLFEGALPQQVDAV 507
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 508 VTKFGMPMGPFAMGDLAGLDIG-------WRSRKDRGIKSEIADALCEAGRFGQKTGKGY 560
Query: 421 YLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ +A PDPEV+ I S G+ K ++S+++I+E + +P++NE R+
Sbjct: 561 YKYEAGSRAPLPDPEVEALINDTLSKLGL----KRREVSDEEILERMMYPMINEGARILE 616
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ + G G+P YR
Sbjct: 617 EGIAARPSDIDVIWLYGYGWPIYR 640
>gi|390168303|ref|ZP_10220267.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum B90A]
gi|389589183|gb|EIM67214.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum B90A]
Length = 654
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 178/508 (35%), Positives = 268/508 (52%), Gaps = 27/508 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVAT----LYKTDKI 56
M++ P+ EEA GL+D VA L+ ARQ+A + P V T + D++
Sbjct: 155 MIVGGDPISAEEALEAGLLDRKVADGTLIEAARQFAREAAGEGAP-VRTRDLPVADPDRV 213
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
+ + + ++ A R+ P C++V+ G+ L E F +L
Sbjct: 214 DTV-----LDEYGNANPRRFG-GQDAPAACVEVIRKGLRVPFDEALALERAAFTRLRDGA 267
Query: 117 TCKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+L H+FFA+R SKV G+ D P + + ++G G MG GIA AL+ + PV+L
Sbjct: 268 QSAALRHVFFAEREVSKVAGIDADTPRLP--IDRAGVIGAGTMGRGIAMALLAAGLPVVL 325
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E + L+AG+ VR + VK G+M + + + LTG L Y+ +VD+VIEA
Sbjct: 326 VEQRREALDAGLAAVRDLIARAVKGGRMDRASADAASARLTGSLSYDDLAEVDLVIEAAF 385
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +KQ IF L+ P ILA+NTS +D++ I T ++++G HFFSPA++M LL
Sbjct: 386 ETMEVKQVIFRALDGVAKPTAILATNTSYLDVDAIAACTSRPEQVLGLHFFSPANIMKLL 445
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EIVR +TSPQV+ LD+ K++ K +V GN GF NRM AA + G Y
Sbjct: 446 EIVRGARTSPQVLATALDLAKRLGKIAVVAGNAHGFIGNRMLMVRRLAAEAMALEGASPY 505
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
IDR + FGMPMGPFR+ DL G + PE + S I + E R G+
Sbjct: 506 AIDRVLVAFGMPMGPFRIGDLAGLDLGWT---------PETSTGSTIRERLNERGRRGQK 556
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
GFY YD+ +A P PEV++ I + + G+ P+ S++ I+ + P++ E
Sbjct: 557 VGAGFYDYDDEGRARPSPEVERIIAELAADKGI---PQR-DWSDEAILAGLLDPMIEEGR 612
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ AEGIA +A+D+D+ V G G+P +R
Sbjct: 613 RIVAEGIAQRASDVDMVWVHGYGWPRWR 640
>gi|319793843|ref|YP_004155483.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Variovorax
paradoxus EPS]
gi|315596306|gb|ADU37372.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Variovorax
paradoxus EPS]
Length = 701
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/447 (35%), Positives = 254/447 (56%), Gaps = 9/447 (2%)
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
P G+A F+F + + N P++CID V+A G+ +E F L+ +
Sbjct: 213 PQGDA--YFQFTKNMVGGMSKNYPAPLMCIDAVQAATKMKFDQGMAEERRIFTALMFTPE 270
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L H+F A+R SK+P V + R + V ++G G MG GI+ + + PV + E
Sbjct: 271 SLALRHLFMAERAASKIPDVPE-DTPKREINSVGVIGAGTMGGGISMNFLNAGIPVKILE 329
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ ++ L+ G+ ++ N +++VKKGK+ ++K+ + ++LL+ L Y+ KD D++IEA+ E
Sbjct: 330 MKQEALDRGVATIKKNYEAQVKKGKLKEDKYAQRMALLSTTLSYDDLKDADLIIEAVFEE 389
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+++F +L++ ILASNTST+D++ I T +VG HFFSPA+VM LLE+
Sbjct: 390 IGVKEKVFKELDRVAKKGAILASNTSTLDVDKIASFTERPQDVVGMHFFSPANVMKLLEV 449
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+ V+ ++ IGKKIKKT +V G C GF NRM Y++ A L++ G +
Sbjct: 450 VRGKATAKDVLATVMAIGKKIKKTSVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPQQV 509
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+AI KFG MGPFR+ DL G + A + + Y S + E R G+ T
Sbjct: 510 DKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRATERADMKY-SRTADKLCELGRFGQKTG 568
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y +R A P V K IE R G I P+ K+S+++IV+ + + +VNE
Sbjct: 569 AGWYDYQAGKRDAIPSDLVNKMIEDHRKELG--ITPR--KISDEEIVQRLVYALVNEGAH 624
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ +GIA K+ D+D+ + G GFP +R
Sbjct: 625 ILEDGIASKSGDIDMVYLTGYGFPIWR 651
>gi|262195563|ref|YP_003266772.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Haliangium
ochraceum DSM 14365]
gi|262078910|gb|ACY14879.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Haliangium
ochraceum DSM 14365]
Length = 686
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/507 (34%), Positives = 261/507 (51%), Gaps = 21/507 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHR--RPWVATLYKTDKIEP 58
M +P+ AH GL+D VV + Q E RP + I+
Sbjct: 151 MCARGEPISAARAHQAGLIDRVVDTDDEDGLLEQAIAFAEEIAAVRPIPRVGERELAIDS 210
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
A + F RA ++ P I VE GLQ E E+F KL E
Sbjct: 211 EALAETVAAF-RAANERRFRGFDAPEANIRCVERAAQVPLAEGLQYEREEFSKLSEGEQS 269
Query: 119 KSLVHIFFAQRGTSKVPGVTDL--GLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++ H+FFA+R +K+ DL G+ R + +V I+G G MG GIA + + PV L
Sbjct: 270 AAMRHLFFAERKAAKI---DDLPAGIETRAIARVGIIGAGTMGGGIAMNFVQAGVPVTLV 326
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E +++ L+ G+G + N Q KG+ T + E + LLTG L E + D++IEA+ E
Sbjct: 327 ETSQEALDRGLGVIAKNYQRSAAKGRFTPAQVESWLGLLTGTLAIEELAECDLIIEAVFE 386
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++++K QIFA L++ P ILA+NTS +D++ I ++G HFFSPA+VM LLE
Sbjct: 387 DMAVKTQIFAKLDEIAKPGAILATNTSYLDIDEIAASISRPGDVLGTHFFSPANVMKLLE 446
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR +T+P V+ ++ + KKI+K +V G C GF NRM P + A L+ G
Sbjct: 447 LVRGARTAPDVLATVMALAKKIRKVAVVSGVCHGFIGNRMLEPRQREASKLLLEGATPEQ 506
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+D FGMPMGPF++ADL G + + +E+ ++ + + R G+
Sbjct: 507 VDAVHVAFGMPMGPFQMADLAGVDIGWHRDPERVESVRDQ---------LCAEGRWGQKK 557
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
GFY YDERR+ SP P V + I + R GV + + + +IV +P+VNE R
Sbjct: 558 GAGFYDYDERRQPSPSPRVGEIIAEWRERLGV----EARAIDDDEIVARTLYPMVNEGAR 613
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ AEGIA +A+D+D+ V G G+P YR
Sbjct: 614 ILAEGIAQRASDIDVVWVYGYGWPVYR 640
>gi|209963882|ref|YP_002296797.1| peroxisomal bifunctional enzyme [Rhodospirillum centenum SW]
gi|209957348|gb|ACI97984.1| peroxisomal bifunctional enzyme [Rhodospirillum centenum SW]
Length = 698
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/512 (34%), Positives = 273/512 (53%), Gaps = 27/512 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTAR-QWALDILEHRRPWVATLYKTDKIEPL 59
M+ + + V +AH LG++DA+V + + R ALD+ P+ + ++I
Sbjct: 152 MITSGEFVPAPKAHELGILDAIVEGDPVDGAVRFAEALDLAG---PYPRVRDRAERIA-A 207
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+F R K A L P C+D V+A GL++E E F + +
Sbjct: 208 DRGSAVFDEKRRALEKTARGLFAPQRCVDAVQAAAELPFEEGLKRERELFGQCMAHPQSA 267
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+L+H+FFA+R K+P V A R V A+LG G MG GIA + PV L E +
Sbjct: 268 ALIHVFFAERAIGKIPDVPADTPA-RPVATAAVLGAGTMGGGIAMNFANAGIPVTLLETS 326
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+ + N V KG++TQ + ++ +SL+T LD + DMV+EA+ E+++
Sbjct: 327 QEALDRGLATIARNYAGTVAKGRLTQAEMDRRLSLITPTLDMAALAGADMVVEAVFEDMA 386
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+KQ +F L+ P +LA+NTST+D++ I T ++G HFFSPA+VM LLE+VR
Sbjct: 387 VKQDVFRRLDTVAKPGAVLATNTSTLDIDAIAAVTSRPADVIGMHFFSPANVMKLLEVVR 446
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+ T+ VI + G+KI K ++VGNC GF NRM PY++ A LLVE G +D+
Sbjct: 447 GSATARDVIATAMQTGRKIGKVSVLVGNCDGFVGNRMLMPYSRQAELLVEEGAWPEQVDK 506
Query: 360 AITKFGMPMGPFRLADLVGFGVA-------IATGMQFIENFPERTYKSMIIPIMQEDKRA 412
A+ +GM MGPF + DL G V +A G +R Y +M R
Sbjct: 507 ALQDWGMAMGPFAMGDLAGVDVTWRIRQRRLAEGKAAGSPLTDRLY------LMD---RY 557
Query: 413 GETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ T G++ Y+ R PD VK+ IE R I P+ +S+++IV+ + + +V
Sbjct: 558 GQKTGAGWFRYEAGSRTPLPDDVVKRMIENHRETH--QIQPR--AISDEEIVKRMIYALV 613
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE + EG+A++A+D+D+ + G GFP +R
Sbjct: 614 NEGAKALEEGMALRASDIDVIYLYGYGFPAWR 645
>gi|294010197|ref|YP_003543657.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
gi|292673527|dbj|BAI95045.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
Length = 654
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/510 (35%), Positives = 268/510 (52%), Gaps = 31/510 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVAT----LYKTDKI 56
M++ P+ EEA GL+D VA L+ ARQ+A + P V T + D++
Sbjct: 155 MIVGGDPISAEEALEAGLLDRKVADGTLIEAARQFAREAAGEGAP-VRTRDLPVADPDRV 213
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
+ + + ++ A R+ P C++V+ G+ L E F +L
Sbjct: 214 DTV-----LDEYGNANPRRFG-GQDAPAACVEVIRKGLHVPFDEALALERAAFTRLRDGA 267
Query: 117 TCKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+L H+FFA+R SKV G+ D P + +V ++G G MG GIA AL+ + PV+L
Sbjct: 268 QSAALRHVFFAEREVSKVAGIDADTPRLP--IDRVGVIGAGTMGRGIAMALLTAGLPVVL 325
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E + L+AG+ VR + VK G+M + + + LTG L Y+ +VD+VIEA
Sbjct: 326 VEQRREALDAGLAGVRDLIARAVKGGRMDRASADAASARLTGSLSYDDLAEVDLVIEAAF 385
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E + +KQ IF L P ILA+NTS +D++ I T ++++G HFFSPA++M LL
Sbjct: 386 ETMEVKQVIFRALGGVAKPTAILATNTSYLDVDAIAACTSRPEQVLGLHFFSPANIMKLL 445
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EIVR +TSPQV+ LD+ K++ K +V GN GF NRM AA + G Y
Sbjct: 446 EIVRGARTSPQVLATALDLAKRLGKIAVVAGNAHGFIGNRMLMARRLAAEAMALEGASPY 505
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
IDR + FGMPMGPFR+ DL G + PE + S I + E R G+
Sbjct: 506 AIDRVLVAFGMPMGPFRIGDLAGLDLGWT---------PETSTGSTIRERLNERGRRGQK 556
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAK--LSEKDIVEMIFFPVVNE 473
GFY YD+ +A+P PEV++ I + +A D + S++ I+ + P++ E
Sbjct: 557 VGAGFYDYDDEGRATPSPEVERIIAE------LAADKAIPQRDWSDEAILAGLLDPMIEE 610
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ AEGIA +A+D+D+ V G G+P +R
Sbjct: 611 GRRIVAEGIAQRASDVDMVWVHGYGWPRWR 640
>gi|421888133|ref|ZP_16319245.1| fused 3-hydroxybutyryl-CoA
epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA
dehydrogenase [Ralstonia solanacearum K60-1]
gi|378966523|emb|CCF95993.1| fused 3-hydroxybutyryl-CoA
epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA
dehydrogenase [Ralstonia solanacearum K60-1]
Length = 693
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 162/439 (36%), Positives = 247/439 (56%), Gaps = 7/439 (1%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
+FAR A N P C+D V+A V G++ E + F +L+ + ++L H F
Sbjct: 212 LQFARNTVAAVARNFPAPGKCVDAVQAAVEKRFDDGIKFERDLFIELVNTTESRALRHAF 271
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
F +R K+P V + R+V++VA++G G MG GI+ + + PV + E ++ L+
Sbjct: 272 FGERAAGKIPDVPE-DTPVRKVERVAVIGAGTMGGGISMNFLNAGIPVTILETRQEALDR 330
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
G+ +R N ++ KKGK+TQEK E ++LL L Y+ +D D+VIEA+ E++ +K+ +F
Sbjct: 331 GVATIRKNYENSAKKGKLTQEKVEARMALLKPTLSYDDIRDADLVIEAVFEDMGVKEAVF 390
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
L++ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR T
Sbjct: 391 KTLDEVAKPGAILASNTSTLDVDRIAGFTRRAQDVVGMHFFSPANVMKLLEVVRGKATGK 450
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
V+ ++ K IKKT +V G C GF NRM Y++ A L++ G +DRA+ FG
Sbjct: 451 DVLATVMKTAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAMETFG 510
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYD- 424
MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+Y Y
Sbjct: 511 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKV 569
Query: 425 ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
RK P EV I + G+A K+S+++IVE + + +VNE ++ EGIA
Sbjct: 570 GDRKPYPSQEVNDMIVQHSKDLGIA----RRKISDEEIVERLVYALVNEGAKILEEGIAS 625
Query: 485 KAADLDIASVMGMGFPPYR 503
KA+D+D+ + G GFP +R
Sbjct: 626 KASDIDMVYLTGYGFPLFR 644
>gi|375107014|ref|ZP_09753275.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
JOSHI_001]
gi|374667745|gb|EHR72530.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
JOSHI_001]
Length = 696
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/508 (35%), Positives = 276/508 (54%), Gaps = 19/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ P G + DAVV +V A +A +++ + P L +T ++
Sbjct: 154 MIVSGSPAAGATFKGTPVADAVVDAG-VVDAAVAFAEGVVKDKTP----LRRTRDLKVAA 208
Query: 61 EAREIF-KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
E F +FAR A L P C+D V + L+ E E F L+ + +
Sbjct: 209 PNAEAFLQFARNTVGAMAKGLPAPGKCVDAVALSLSKPFDEALRLEREMFLALMGTPESR 268
Query: 120 SLVHIFFAQRGTSKVPGVTDL-GLAP-RRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L H+F A+R SK+ DL AP R + KV ++G G MG GI + + PV+L E
Sbjct: 269 ALRHVFGAERAASKI---ADLPADAPLRSIAKVGVIGAGTMGGGITMNFLNAGIPVVLLE 325
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ ++ L+ G+G +R N ++ +KKGK+ E+ E+ + L+T L Y++F DVD+VIEA+ EN
Sbjct: 326 MKQEALDKGLGTIRRNYENSMKKGKLKPEQVEQRMGLVTPTLSYDAFADVDLVIEAVFEN 385
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +KQQ+F L++ C P ILASNTS ++++ I T ++G HFFSPA+VM LLE+
Sbjct: 386 MDVKQQVFETLDRVCKPGAILASNTSYLNIDAIAGFTKRPADVLGLHFFSPANVMRLLEV 445
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR +T+P V+ + + KKIKK +V G C GF NRM Y AA L+ G +
Sbjct: 446 VRGAKTAPDVLATAMALAKKIKKVAVVSGVCDGFIGNRMLARYGAAAQGLINAGALPQQV 505
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
D A+ KFG+ MGPFR+ DL G + AT + E E K ++ + E R G+ T
Sbjct: 506 DGALQKFGLAMGPFRMGDLAGLDIGWATRKRKAAEAGVE--MKPIVADRLCEAGRFGQKT 563
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y+ +R PDP + I R+ G+ K+S+ ++VE + +VNE
Sbjct: 564 GAGWYRYEAGQRDPIPDPVTEALIVAHRTALGLTAR----KVSDAEVVERCIYALVNEGA 619
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ E IA +A+D+D+ + G GFP R
Sbjct: 620 RILEERIAARASDIDLVYLNGYGFPLTR 647
>gi|413962686|ref|ZP_11401913.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
gi|413928518|gb|EKS67806.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
Length = 694
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 271/505 (53%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIE-PL 59
M+++ PV E+ L D + A L+ +A +A + P + +IE P
Sbjct: 152 MIVSGAPVPSEKLAQTALFDEL-ADGDLLESALSFARRAADRGGPHPKV--RDRQIEHPN 208
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
E +FAR A + P CID +E GV G GL E E F L+++ +
Sbjct: 209 AEG--FIQFARNSVAGVAKHFPAPHKCIDAIEKGVKEGFERGLAFERECFLALVQTPESR 266
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+L H FF +R +K+ V R+++++ ++G G MG GIA + + PV+L E
Sbjct: 267 ALRHAFFGERAAAKIADVPS-NTPVRKIERIGVIGAGTMGGGIAMNFLNAGLPVVLLETK 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L+ GI +R N +++VKKGK+TQEK E+ ++L+ L + D+++EA+ E++S
Sbjct: 326 QDALDRGIATIRRNYEAQVKKGKLTQEKVEERMALIAPTLAFGDLAQADLIVEAVFEDLS 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L++ ILASNTST++L+ I T ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRQLDEIAKSGAILASNTSTLNLDTIASFTKRPGDVIGMHFFSPANVMKLLEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+T V+ ++ + KKI+KT +V G C GF NRM Y + A ++E G IDR
Sbjct: 446 GAKTEKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQIDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI FG MGPFR++DL G + A + PE Y S + + E R G+ T G
Sbjct: 506 AIENFGFAMGPFRMSDLAGNDIGWAIRKRRYREQPELHY-SRVADRLCEMGRFGQKTGAG 564
Query: 420 FYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y +R A P V I GV + K+ +++IVE + +VNE ++
Sbjct: 565 WYDYQPGKRDALPSNVVDDMIVAYSKERGV----ERRKIRDEEIVERLVLSLVNEGAKIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP +R
Sbjct: 621 EEGIAGKASDIDMVYLTGYGFPLWR 645
>gi|17546478|ref|NP_519880.1| trifunctonal enoyl-CoA hydratase/delta3-cis-delta2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase [Ralstonia
solanacearum GMI1000]
gi|17428776|emb|CAD15461.1| probable trifunctonal: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 706
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 268/504 (53%), Gaps = 12/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ V E+ GL D ++ L++ A +AL + K + P G
Sbjct: 165 MIVSGTAVPSEQLAKSGLFDQMIE-GDLMAGAIGFALKAAAEGKLPKLRDRKVEHDNPEG 223
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+FAR A N P C+D V+A V G++ E + F L+ + ++
Sbjct: 224 ----FLQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIRFERDLFIALVNTTESRA 279
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H FF +R SK+P V + R+V+ VA++G G MG GIA + + PV + E +
Sbjct: 280 LRHAFFGERAASKIPDVPE-DTPVRKVETVAVIGAGTMGGGIAMNFLNAGIPVTILETKQ 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ GI +R N +S KKGK+T K E ++LL L Y+ +D D+VIEA+ E++ +
Sbjct: 339 EALDRGIATIRKNYESSAKKGKLTPGKVEARMALLKPTLSYDDIRDADLVIEAVFEDMGV 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F L+ P ILASNTST+D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 399 KETVFKTLDAVAKPGAILASNTSTLDVDRIAGFTQRPQDVVGMHFFSPANVMKLLEVVRG 458
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
T+ V+ ++ + K IKKT +V G C GF NRM Y++ A L++ G +DRA
Sbjct: 459 KATAKDVLATVMKLAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRA 518
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG MGPFR+ DL G + A + + P+ Y S ++ E R G+ T G+
Sbjct: 519 VETFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRYGQKTGAGW 577
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y RK P EV I + G+ K+S+++IVE + F +VNE ++
Sbjct: 578 YDYKAGDRKPYPSQEVNDMIIQHSKDLGIT----RRKISDEEIVERLVFALVNEGAKILE 633
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA KA+D+D+ + G GFP +R
Sbjct: 634 EGIASKASDIDMVYLTGYGFPLFR 657
>gi|433772523|ref|YP_007302990.1| 3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium australicum WSM2073]
gi|433664538|gb|AGB43614.1| 3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium australicum WSM2073]
Length = 686
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 263/501 (52%), Gaps = 18/501 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ P+ +EA+ GLVDAV L + A +A ++ P+ + D ++
Sbjct: 152 MIVSGTPIGADEAYGAGLVDAVF-EGDLTTHAVNFAREMARKGGPFPPVRDRDDVLKETD 210
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A F A ++A L PI C V V L +E F KL+ S+ ++
Sbjct: 211 LA--AFDAEAADLARKARGLEAPIACARAVRNAVTLPFDEALAEERALFVKLVASDQSRA 268
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
H+FFA+R +K+PG + RR+ +V ++G G MG GIA A +PV L E ++
Sbjct: 269 QRHLFFAEREAAKLPGKD---VVKRRIARVGVIGAGTMGGGIAMAFANGGFPVTLLETSQ 325
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L G+ + N V +G ++++ + ++ G +D+ D D+++EA E++++
Sbjct: 326 EALRRGLATIEKNYTVSVARGSLSEDAKRQRLAQFKGTIDHADLADCDLIVEAAFEDMAV 385
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K++IF L+ P ILA+NTS +D++ I T ++G HFFSPA+VM LLEIVR
Sbjct: 386 KKEIFGKLDAVARPGAILATNTSYLDIDEIAASTSRPQDVLGLHFFSPANVMKLLEIVRA 445
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P + ++D+ ++I K +VVG C GF NRM + L+ G ID+A
Sbjct: 446 EKTAPDALATVIDLARRIGKVAVVVGVCHGFVGNRMLAVRGSESEALLLEGATPSQIDKA 505
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
T FG PMGPF++ DL G + N R ++I + E R G+ T +GF
Sbjct: 506 FTDFGWPMGPFQMGDLAGLDIG-------WRNRKARGLTAVIADTLCEQGRFGQKTGRGF 558
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY+ R PDPEV+ I + G+ P+ + +I+E +P+VNE ++
Sbjct: 559 YLYENGSRTPVPDPEVEALIRDKAAEKGIV--PR--TIDADEIIERTLYPLVNEGAKILE 614
Query: 480 EGIAVKAADLDIASVMGMGFP 500
EGIA +A+D+D+ V G GFP
Sbjct: 615 EGIAARASDIDVVWVNGYGFP 635
>gi|357973934|ref|ZP_09137905.1| fatty oxidation complex, alpha subunit [Sphingomonas sp. KC8]
Length = 679
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 172/503 (34%), Positives = 267/503 (53%), Gaps = 22/503 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ ++A +GL+D + L + A +A +I + R P T KT EP
Sbjct: 150 MIVGGAPIGAKKALDVGLIDRLATEGNLAAEAIAFAQEIADVR-PLPRTSEKTAVAEP-- 206
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+F+ RA ++ P CI ++A V GL+ E + L+ S+ K+
Sbjct: 207 ---GVFEAFRAANARKMKGFEAPEACITAIKAAVELPFAEGLEVERGLIKTLVASDQSKA 263
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
HIFFA+R +KV G+ D L P V+ V ++G G MG GIA + PV + E+
Sbjct: 264 QRHIFFAERAAAKVDGLPADTPLIP--VQSVGVIGAGTMGGGIAMNFLSIGIPVTILEMK 321
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+ V N + VK G+MTQE+ +K ++LL L Y+ D++IEA+ EN+
Sbjct: 322 QEALDRGVATVAKNYANNVKSGRMTQEQADKAVALLKPTLSYDDLGAADLIIEAVFENMD 381
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+++FA L+K ILASNTS +D++ I T + ++G HFFSPA+VM LLE+VR
Sbjct: 382 VKKEVFAKLDKVAKAGAILASNTSYLDVDEIAAVTSRPEYVLGMHFFSPANVMKLLEVVR 441
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+TS V+ + + K IKK +V G C GF NRM P A L+ G +DR
Sbjct: 442 GAKTSDSVLATAMSLAKSIKKIAVVAGVCYGFIGNRMLKPRQDQAGQLILEGAKPSDVDR 501
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
FG PMGPF+LADL G + + T + + + + R G+ + G
Sbjct: 502 VFLDFGFPMGPFQLADLAGLDIGW---------HRDPTRRETVREALCAEGRLGQKSGSG 552
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
FY YDE+R+ +P P +K I + + G+A +S+ ++ E + +VNE +V
Sbjct: 553 FYDYDEKRQRTPSPVAEKIIAEYAASKGIAQR----VISDDEVRERCLYTLVNEGAKVLE 608
Query: 480 EGIAVKAADLDIASVMGMGFPPY 502
EG A +A+D+D+ V G G+P Y
Sbjct: 609 EGKAQRASDIDVVWVFGYGWPVY 631
>gi|334342888|ref|YP_004555492.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334103563|gb|AEG50986.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 685
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/505 (33%), Positives = 278/505 (55%), Gaps = 19/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ KP+K ++A LG++DA+ +L A +A IL +P + + +K+E
Sbjct: 153 IITGGKPIKAKQALHLGMIDALAEEGKLREDAIAFARRILAEGKPLLRVRDRNEKLEGAK 212
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGP--RAGLQKEAEDFQKLLRSETC 118
+F + + P + ++A V + P AG ++E E F++L S
Sbjct: 213 GNPGLFDDYLKKNARAFRGFKAPTNIVRAIQAAVDTAPDFEAGSRRETELFRELEPSTES 272
Query: 119 KSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++ + FFA+R T+K+P + D+ P ++ V ++G G MG GIA + PV L E
Sbjct: 273 QAQRYYFFAERETAKIPDIGKDVPTLP--IQTVGVIGAGTMGGGIAMNFLNIGVPVTLME 330
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++++ L+ GI +R N +S KKG++TQ++ E+ ++L+T + E+ VD+VIEA+ E
Sbjct: 331 MSQEALDRGIAVIRRNYESAAKKGRLTQDQVEQRMALITPAIGLEALSQVDLVIEAVFEE 390
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ +FA L+ C ILASNTS +D++ I T + +VG HFFSPA+VM LLE+
Sbjct: 391 MGVKKDVFAKLDGICKQGAILASNTSFLDVDEIAAATSRPEWVVGLHFFSPANVMRLLEV 450
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR ++TS +V+ + +GKKI K P++ C GF NR+ + A ++ G +
Sbjct: 451 VRGDKTSKEVVATAMALGKKIGKVPVLSRVCFGFIANRIMAKRSAEASAIILEGPSPQQV 510
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ +G MGPF++ DLVG V I G ER+ ++ + R G+
Sbjct: 511 DKALYDYGFAMGPFQMNDLVGLDV-IGRGST------ERSVAGDLVKL----DRLGQKKN 559
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y YDE RKA+P P + I GV S+ DIV + +PVVNE ++
Sbjct: 560 GGYYDYDENRKATPSPVAAQVIADFAQFKGVE---NKGPQSDADIVARLLYPVVNEGAKL 616
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EGIA++A+D+D+A+++G +P Y
Sbjct: 617 LEEGIALRASDIDVAAILGYNWPVY 641
>gi|392951320|ref|ZP_10316875.1| hypothetical protein WQQ_09470 [Hydrocarboniphaga effusa AP103]
gi|391860282|gb|EIT70810.1| hypothetical protein WQQ_09470 [Hydrocarboniphaga effusa AP103]
Length = 712
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 173/505 (34%), Positives = 277/505 (54%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L+ PV G +A LG+VD +V L++ A +A I+ RP T DK+
Sbjct: 168 MILSGTPVNGTKALELGIVDELV-DGDLLAGAIAFARKIVAEGRPLRVTSQLQDKVANTD 226
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A IF A + K+ L P ++ V+A G E + +++ S K+
Sbjct: 227 PA--IFADAIKKNEKKWKGLLSPYKIVEAVQAACTLPFAEGAALELKVYRETQASPQRKA 284
Query: 121 LVHIFFAQRGTSKVPGVT-DLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L ++FFA+R +K+P V DL AP VK A++G G MG GIA + + PV + E+
Sbjct: 285 LTYMFFAEREAAKIPDVPRDLKPAP--VKSAAVIGAGTMGGGIAMSFANAGIPVKILELK 342
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+AG+ R++ N + V +G TQ + ++ + ++ DY D D+V+EA+ EN+
Sbjct: 343 QEALDAGLARIKGNYATSVSRGSTTQAQMDERLGRISTTTDYAQIGDADIVVEAVFENME 402
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+KQ +F L+ IL +NTST+D++ I T ++G HFFSPA+VM L+E VR
Sbjct: 403 IKQGVFKTLDGVMKQGAILGTNTSTLDIDQIANVTKRPQDVIGMHFFSPANVMKLVENVR 462
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+TSP++I + + K+I K P++ GNC GF NR+ Y + L+E G + ID
Sbjct: 463 GAKTSPEIIGRTMAVSKQIGKVPVLAGNCDGFIGNRILAAYGRECDFLLEEGATPWQIDT 522
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK-SMIIPIMQEDKRAGETTRK 418
A+ FG PMG F + D+ G V Q+ E F ++ + S + + E R G+ T
Sbjct: 523 ALQGFGFPMGLFLMRDMAGLDVGWRI-RQYREQFRDKNQRYSPVGDRICELGRYGQKTGA 581
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
G+Y Y E R A+PDPE++ I K + G+ + K+S+++IV + +VNE ++
Sbjct: 582 GYYKY-EGRNATPDPEIEALIVKVSADLGI----ERRKVSDEEIVWRVLSVMVNEGAKIV 636
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA++A+D+D+ V G GFP ++
Sbjct: 637 GEGIAIRASDIDVTYVFGYGFPRHQ 661
>gi|259415983|ref|ZP_05739903.1| peroxisomal bifunctional enzyme [Silicibacter sp. TrichCH4B]
gi|259347422|gb|EEW59199.1| peroxisomal bifunctional enzyme [Silicibacter sp. TrichCH4B]
Length = 696
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 272/506 (53%), Gaps = 18/506 (3%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
+ + + + +EA G++D + + + +A +++ AT +T ++ P
Sbjct: 153 ITSGRQISADEALKTGVIDRISDTSDIREMGLTYARELVASG----ATPRRTSELSPAPV 208
Query: 62 AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSL 121
A E+F AR + K+A P CI VE+ GL E FQ+L+ S+ +L
Sbjct: 209 AAEVFDAARTRLAKKARGQLAPQNCIKAVESATHLSFAEGLANERALFQELMESDQRAAL 268
Query: 122 VHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEK 181
+H FFA+R +KVP + D+ APR + ++ ++GGG MG+GIA + +L+ V L E +
Sbjct: 269 IHAFFAERQVAKVPEIKDV--APRAIDQIGVIGGGTMGAGIAVSALLAGLQVTLIERDAD 326
Query: 182 FLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVL----DYESFKDVDMVIEAIIEN 237
+ V L+ VK+GK++QEK++ +++ G DY + + D+VIEA+ E+
Sbjct: 327 AVARAEANVSKTLRGSVKRGKLSQEKYD---AIMGGTFRASDDYATLAEADVVIEAVFES 383
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ +F L+ C P +LASNTS +D+N I T + ++G HFFSPAHVM LLEI
Sbjct: 384 MEVKKDVFTKLDAICKPGAVLASNTSYLDVNEIAAMTSRPEDVIGLHFFSPAHVMRLLEI 443
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V ++T+P+V + K++KK + G C GF NR+ Y +A V G + +
Sbjct: 444 VVADKTAPEVTATGFALAKRLKKVAVRAGVCDGFIGNRILSHYRKAGDGAVLAGASPFEV 503
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+ FG+ MGP+ ++DL G + AT + R + + E G
Sbjct: 504 DRALVNFGLAMGPYAVSDLAGLDIGWATRKRLAPTRDPREVYAEFADRLCEAGHFGRKAG 563
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
KGFY+Y E + P+ EV + I R+ G+A ++SE++IV+ +VNEA RV
Sbjct: 564 KGFYVYGEEGQV-PNDEVLEHIATERAAKGIAAR----EISEQEIVDRYMAAMVNEAARV 618
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D+ + G GFP +R
Sbjct: 619 VEEGIALRPLDVDVTLLNGYGFPRWR 644
>gi|99080201|ref|YP_612355.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Ruegeria sp. TM1040]
gi|99036481|gb|ABF63093.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Ruegeria sp. TM1040]
Length = 696
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 274/504 (54%), Gaps = 14/504 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
+ + + + EEA + G++D + + +A +++ A +T I P
Sbjct: 153 ITSGRQIGAEEALAAGVIDRISDTADIREMGLSYARELIASG----AQPRRTSDIAPEPV 208
Query: 62 AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRA-GLQKEAEDFQKLLRSETCKS 120
+ ++F+ ARA+ K+A P C+ VE G +S P A GL E FQ+L+ S+ +
Sbjct: 209 SPDVFEQARAKLAKKARGQLAPQNCVKAVE-GALSLPFAEGLANERALFQELMESDQRAA 267
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FFA+R +KVP + G+ PR + ++ ++GGG MG+GIA + +L+ V L E +
Sbjct: 268 LIHAFFAERQVAKVPEIN--GVEPRAISRIGVIGGGTMGAGIAVSALLAGLQVTLIERDA 325
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTI-SLLTGVLDYESFKDVDMVIEAIIENVS 239
+ + V LQ VK+GK+TQEKF+ + +Y + D+VIEA+ E++
Sbjct: 326 EAVSRAETNVAKILQGSVKRGKLTQEKFDAIMREAFEASAEYATLATADVVIEAVFESME 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+++F L+ C P +LASNTS +D+N I T ++G HFFSPAHVM LLEIV
Sbjct: 386 VKKEVFTKLDAICKPGAVLASNTSYLDVNEIAAMTTRPQDVIGLHFFSPAHVMRLLEIVV 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
++T+P V + K++KK + G C GF NR+ Y +A V G + +DR
Sbjct: 446 ADETAPDVTATGFALAKRLKKVAVRAGVCDGFIGNRILSHYRKAGDGAVLAGASPFEVDR 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
A+ FG+ MGP+ ++DL G + AT + R + + + E G T KG
Sbjct: 506 ALVNFGLAMGPYAVSDLAGLDIGWATRKRLAPTRDPREVYAEFVDRLCEAGHLGRKTGKG 565
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
FY+YD+ + +P+ EV I + R+ G+A ++ E++IV+ ++NEA RV
Sbjct: 566 FYVYDDGGQ-TPNAEVLDHIAEERAAKGIAAR----EIPEQEIVDRYMAAMINEAARVVE 620
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D+ + G GFP +R
Sbjct: 621 EGIALRPLDVDVTLLNGYGFPRWR 644
>gi|359790820|ref|ZP_09293699.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359253181|gb|EHK56342.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 694
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 171/501 (34%), Positives = 264/501 (52%), Gaps = 16/501 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ PV + A + LVDA+ + + L++ A +A D + +I +G
Sbjct: 152 MIVSGAPVPADVALASALVDAI-SESSLLANAVAFARDKAASGVAAAPVRNRGGQI--IG 208
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
F A+ ++A L P+ C V + L E E F KL+ + ++
Sbjct: 209 ADLAAFDADAAELARKARGLEAPLACAQSVRNAITLPFDEALAAERELFTKLVSGDQSRA 268
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
H+FFA+R +KVPGV +APR +++V ++G G MG GIA A + PV L E+N
Sbjct: 269 QRHLFFAEREATKVPGVGKE-VAPREIRRVGVIGAGTMGGGIAMAFVNGGIPVTLLEMNR 327
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+ + N V +G ++++ ++L DY + D+VIEA+ E++++
Sbjct: 328 EALDRGLATIEKNYAISVSRGSLSEDAKAGRMALFAPTTDYADLAECDLVIEAVFEDMAV 387
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F+ L+ P ILA+NTS +D+N I T ++G HFFSPA+VM LLEIVR
Sbjct: 388 KREVFSKLDAVAKPTAILATNTSYLDVNEIAASTSRPQDVLGLHFFSPANVMKLLEIVRG 447
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P V+ L + K+I K P+VVG C GF NRM + A L+ G ID+
Sbjct: 448 EKTAPDVLATALGVAKRIGKVPVVVGVCHGFVGNRMLSARSADAENLLLEGASPDEIDKV 507
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
T FG PMGPF++ DL G + N R ++I + E R G+ T KGF
Sbjct: 508 FTGFGWPMGPFQMYDLAGLDIG-------WRNRKARGQLAVIADRLCEQGRFGQKTGKGF 560
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY+ R PDPEV + IE + GV+ + +I+E +P+VNE ++
Sbjct: 561 YLYENGSRTPVPDPEVTQLIEDSARERGVS----RRAVPAGEIIERTLYPMVNEGTKILE 616
Query: 480 EGIAVKAADLDIASVMGMGFP 500
EGIA +A+D+DI G GFP
Sbjct: 617 EGIAARASDIDIVWTNGYGFP 637
>gi|307944786|ref|ZP_07660124.1| noyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Roseibium sp. TrichSKD4]
gi|307772000|gb|EFO31223.1| noyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Roseibium sp. TrichSKD4]
Length = 771
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 273/512 (53%), Gaps = 32/512 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA--PNQL-VSTARQWALDILEHRRPWVATLYKTDKIE 57
++ T ++ E +H +GL+D + P L + A Q LE RR L T+ +
Sbjct: 232 LITTGNRIEAEASHEIGLIDVIADGDPRDLAIKFAEQVLSGELETRR--TGELTVTEDPD 289
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ E K RKQ PNL P C++ V A ++ GLQKE F + + S
Sbjct: 290 AIATVAETLK------RKQ-PNLFSPHKCVEAVAASILP-LSEGLQKERSLFFECMESPQ 341
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L+H FFA+R SK+P + PR ++ + ++GGG MGSGIATA +L+ + VIL E
Sbjct: 342 RAGLIHAFFAERAVSKIPEAKE---TPRTIENIGVIGGGTMGSGIATACLLAGFQVILAE 398
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTIS-LLTGVLDYESFKDVDMVIEAIIE 236
+E +E G+ + NL VK+GK+T ++ + +S L+ DY +F D D+VIEA+ E
Sbjct: 399 RDEAGVERGVSIISGNLDGAVKRGKVTADQRDTILSNALSTTTDYAAFSDADLVIEAVFE 458
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++ +K+ +F L+ C +LA+NTS +D+N I T + ++G HFFSPAHVM LLE
Sbjct: 459 DMDVKKSVFKQLDAICKDGAVLATNTSYLDVNEIAASTSRPEDVIGLHFFSPAHVMKLLE 518
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+V ++T+P V+ +GK+++K + G C GF NR+ Y +AA L+ G
Sbjct: 519 VVVADKTAPDVVATGFALGKRLRKIAVRAGVCDGFIGNRILNTYKKAADYLMMDGASPEE 578
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI---MQEDKRAG 413
+DRA+ +G MGPF + DL G + A + P R + + I + E + G
Sbjct: 579 VDRAMVNYGFAMGPFTVGDLSGQDIGWAARKR---QAPMRAQQERYVAIPDRLCEQEMFG 635
Query: 414 ETTRKGFYLYDERRKASP--DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
T KG+Y+Y E SP +PE IE R+ +G I P+ SE +I I ++
Sbjct: 636 RKTGKGYYVYGE---GSPTLNPEAVAIIEDERAKAG--ITPR--NFSEDEITARIMTAII 688
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
EA + +GIA++ D+D + G GFP +R
Sbjct: 689 KEAISILEDGIALRPIDIDAVYLFGYGFPRFR 720
>gi|399993437|ref|YP_006573677.1| fatty acid oxidation complex subunit alpha [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398657992|gb|AFO91958.1| fatty acid oxidation complex subunit alpha [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 706
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 264/505 (52%), Gaps = 12/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQ-LVSTARQWALDILEHRRPWVATLYKTDKI-EP 58
M+L+ PVKGE A S GLVDA+ +Q + +A + P + T + +P
Sbjct: 151 MILSGDPVKGEYALSCGLVDALFENDQDFRAHVLGFATRVSHEGDPKRSCADMTVRHPDP 210
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
G R Q + NL P C+ +EA GL++E F +LL +
Sbjct: 211 KG----YLTGFRDQIAHTSKNLVAPERCLVSIEAACEMPLAEGLEQEKAGFAELLDTPQS 266
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
++ H+FFA+R +KVPGVT PR + VA++G G MG GIA A + + YPV L E
Sbjct: 267 RAGRHLFFAERECTKVPGVTRAD-RPRDIASVAVIGAGTMGRGIAIAFLQAGYPVTLLET 325
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ LE G+ +VR + Q +KG+++ ++ E + TG L Y D++IEA E++
Sbjct: 326 TQGALEQGLEKVREHFQRAAQKGRLSADRAEAISANATGTLSYAGLAKADLIIEAAFESM 385
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
++K+QIF L+ + P ILASNTST+DL+ I T + ++G HFFSPA+VM LLE+V
Sbjct: 386 NVKRQIFEALDLHAKPGAILASNTSTLDLDEIATVTSRPEDVIGLHFFSPANVMRLLEVV 445
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +T+P VI + + KKI+K P+ VG C GF NRM PY + L+ G +D
Sbjct: 446 RGAKTAPDVIATAITVAKKIRKLPVTVGVCYGFVGNRMLEPYFREGSRLLLEGATPKQVD 505
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+ FGM MG +ADL G V + + + E R G+ T +
Sbjct: 506 DVLEGFGMAMGIHAMADLAGVDVGARVRQERRSEIAHDPTYQAVQDRLFELGRLGQKTGR 565
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
G Y+Y+ R + DPE+ + + + GV K + +++I+E FP++NE +
Sbjct: 566 GSYVYEGRTRVE-DPEMVQISSELADLHGV----KRRDIDDQEILERCLFPLINEGFLIL 620
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA + D D+ V G GFP +R
Sbjct: 621 EEGIATRPGDCDLIWVNGYGFPNWR 645
>gi|430805524|ref|ZP_19432639.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus sp. HMR-1]
gi|429502228|gb|ELA00543.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus sp. HMR-1]
Length = 715
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 261/513 (50%), Gaps = 21/513 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVV--APNQLVSTARQWALDILEHRRPWVATLYKTDKIEP 58
M+ PV GE A +GL DAV +P+ AL + + P
Sbjct: 163 MIQQGVPVSGETAARIGLADAVADASPSGTRDAGPVVALAV-----DFCRRAAARAVAHP 217
Query: 59 LGEAREI-------FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQK 111
+ A + F A +A N CI VEA GL E F+
Sbjct: 218 VASALAVKAGGDVDFGTRIAAINGKARNAIAQNACIRCVEAATQLPIADGLAFERAQFEA 277
Query: 112 LLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNY 171
L+ K+L HIFFA+R K G A R +++VA++G G MG GIA + + +
Sbjct: 278 LVAGNESKALRHIFFAEREAPKF--AEGKGQALRPIERVAVIGSGTMGVGIAMSFVNAGI 335
Query: 172 PVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVI 231
PV+L E + L+ G+ +R N + KGK+ ++ + + +T L +E+ D D+V+
Sbjct: 336 PVMLIEREQAALDRGVALIRRNYEITAAKGKLAPQQIDARMGRITPTLAFEAVADADLVV 395
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHV 291
EA+ E++++KQ IF L+ C P ILA+NTS ++++ I T ++G HFFSPA+V
Sbjct: 396 EAVFEDMAVKQAIFERLDALCKPSAILATNTSRLNIDTIAASTKRPGDVIGLHFFSPANV 455
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
M LLE+VR T VI + + ++I+K P++V C GF NRM PY + A L+E G
Sbjct: 456 MKLLEVVRGQATHADVIASCMAMAQRIRKIPVLVRVCEGFVGNRMLTPYWREAGFLLEEG 515
Query: 352 TDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKR 411
+DRA+T+FGM MGP +ADL G + AT + P S + + E R
Sbjct: 516 ASPLQVDRALTQFGMAMGPLTMADLAGMDINWATRKRLAPTRPAHLRYSAVADRICELGR 575
Query: 412 AGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
G+ T G+Y Y+ R PDP++ IE +G+A P +++++IVE +
Sbjct: 576 FGQKTNGGYYRYEPGSRTPIPDPQIDALIEDCAREAGIARRP----VADEEIVERCMLAL 631
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+NE R+ EGIA +A+D+D+ V G GFP +R
Sbjct: 632 INEGARILDEGIAQRASDIDVVYVHGYGFPAWR 664
>gi|311107837|ref|YP_003980690.1| fatty acid oxidation complex subunit alpha [Achromobacter
xylosoxidans A8]
gi|310762526|gb|ADP17975.1| fatty acid oxidation complex subunit alpha 1 [Achromobacter
xylosoxidans A8]
Length = 700
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 176/510 (34%), Positives = 257/510 (50%), Gaps = 28/510 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + KP+ A ++GLVDAV + L +AL R PL
Sbjct: 165 MIQSGKPMDATAAMAVGLVDAVAEGDLL-----DFALSYARER--------AAQDSHPLA 211
Query: 61 EAREI------FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLR 114
R + F ARA +A N ID +EA GL +E F L+
Sbjct: 212 ARRALDAGGVDFAAARAGVNPKARNAIAQRAVIDCLEAATRQPIEPGLDEERRLFDALVE 271
Query: 115 SETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
+ K+L H+FFA+R +V G G R+ +V ILG G MG GIA A + Y V
Sbjct: 272 GDASKALRHLFFAEREAPRVTGGGSAG----RIGRVGILGAGTMGGGIAMAYANAGYDVT 327
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
L E + L+ G+ +R N + KGK+ E ++ + LD + D+VIEA+
Sbjct: 328 LYEREQAALDRGMSLIRKNYEITAAKGKLDAAGVEARMARIAPSLDMQDLAQADLVIEAV 387
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++++KQ +F L+ C P ILA+NTS ++++ I T + ++G HFFSPA+VM L
Sbjct: 388 FEDMAVKQAVFRQLDAVCKPGAILATNTSRLNIDEIATCTARPEAVIGLHFFSPANVMKL 447
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE+VR +T VI + + ++I K P++VG C GF NRM Y + A L+E G
Sbjct: 448 LEVVRGARTGADVIATCMAVAQQIGKIPVLVGVCEGFVGNRMLTGYWREAGFLLEEGASP 507
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID A+T+FGM MGP +ADL G + AT + P S + + E R G+
Sbjct: 508 QQIDGALTRFGMAMGPLAMADLAGMDINWATRKRLAPTRPAHLRYSKVADRICELGRFGQ 567
Query: 415 TTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
T+ G+Y Y+ R+ PDP V IE +G+A P +S+++IVE + NE
Sbjct: 568 KTQAGYYRYEPGSRQPLPDPVVDGIIETCAREAGIARRP----VSDEEIVERCMLALANE 623
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ EGIA +A+D+D+ V G GFP R
Sbjct: 624 GARIIEEGIAQRASDVDVVYVHGYGFPGAR 653
>gi|114321260|ref|YP_742943.1| short chain enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Alkalilimnicola ehrlichii MLHE-1]
gi|114227654|gb|ABI57453.1| 3-hydroxyacyl-CoA dehydrogenase [Alkalilimnicola ehrlichii MLHE-1]
Length = 714
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 178/513 (34%), Positives = 268/513 (52%), Gaps = 17/513 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRR-----PWVATLYKTDK 55
+MLT + ++ +A GLVD +VAP L+ AR+ ++ E RR P L + +
Sbjct: 179 LMLTGRQLRARQARKRGLVDDLVAPPILLDAARKRIDELAEPRRHRPKRPLTTRLLENN- 237
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
PLG + R K N P ID V AG G +AGL+ E F +L +
Sbjct: 238 --PLGRRLVYRQSERTVQAKTHGNYPAPPRIIDAVRAGRERGRQAGLETERRHFGELAMT 295
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
++L+ ++FA K G TD G+ PR V++V +LG GLMG+GIA + PV
Sbjct: 296 PEARALMALYFATTALKKDSG-TDAGVEPRPVRRVGVLGAGLMGAGIAYVTSAKAGTPVR 354
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
LK++ + L G+ + +++R K+G +T + + + +T LDY F +D+VIEA+
Sbjct: 355 LKDIALEGLNNGMRHIDGEIRARHKRGALTDFEATRQRTRVTPTLDYRGFGALDVVIEAV 414
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E+ LK ++ AD+E + P H I ASNTS++ ++ I +R++G H+FSP MPL
Sbjct: 415 FEDPELKHRMLADVEAHGPEHVIFASNTSSLPISEIATGAQRPERVIGMHYFSPVEKMPL 474
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ T++T P+VI + +G+ KT IVV + GF VNR+ PY A L++ G +
Sbjct: 475 LEVIATDRTDPEVIATTVALGRTQGKTVIVVRDGAGFYVNRILAPYLNEACRLLQEGVAI 534
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
IDR + +FG P+GPF L D VG V+ F ER + M D R G
Sbjct: 535 DHIDRTLVRFGFPVGPFALLDEVGLDVSEKVAPILHRAFGERMTPVDVGGRMLADGRKGR 594
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
+ KGFY YD +R P E + G+A ++ + I++ P++NEA
Sbjct: 595 KSGKGFYRYDRKRGKGGRP----VDEGVYRLLGLA---PGRDMAPEAIIDRTVLPMINEA 647
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI D DI +V G+GFPP+R F
Sbjct: 648 VRCRDEGIIRCERDGDIGAVFGIGFPPFRGGPF 680
>gi|90417373|ref|ZP_01225298.1| fatty oxidation complex, alpha subunit [gamma proteobacterium
HTCC2207]
gi|90330815|gb|EAS46084.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2207]
Length = 704
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 270/506 (53%), Gaps = 12/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + P+K + A L L+D ++ + L+ A + +L + P + T I+P
Sbjct: 155 LITSGNPIKAKAAVGLNLIDHIIDGDDLLEGALAYTQQLLADKAPLLKVRDIT--IDPAS 212
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
IF +R Q ++A P +D +EA + GL E F L +
Sbjct: 213 FDPAIFDQSRKQLSRRARGQLAPQRIVDCIEAAATTSFDEGLATEGRLFMDLKDDSQSAA 272
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ H+FFAQR +K+ G+ + R ++ VAI+GGG MG GIA PV + E+N+
Sbjct: 273 MRHMFFAQREANKIKGIGKETV-KRPIQSVAIIGGGTMGGGIAMNFANVGIPVTMLEIND 331
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G + N VKKG++++E+ +SL++G DY+ D+VIEA+ EN+ +
Sbjct: 332 EALQRGLGIIDKNYSMTVKKGRLSEEQKHGCMSLISGTTDYQDLATADLVIEAVFENLEI 391
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQ+FA L+K C P ILASNTS D+N I T + ++G HFFSPA++M LLEIVR
Sbjct: 392 KQQVFAKLDKVCKPGAILASNTSYQDVNAIAAATQRPEDVIGLHFFSPANIMKLLEIVRA 451
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
++TS +VI + + K I K P++ G C GF NRMF Y + L + G IDR
Sbjct: 452 DKTSDEVIATSMAVAKAIGKVPVLSGVCFGFIGNRMFSEYGRETQLCLIEGASAEQIDRV 511
Query: 361 ITKFGMPMGPFRLADLVG--FGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+ +GM MGP ++DL G G + G+ E R++ + + E R G+ T
Sbjct: 512 MEDYGMAMGPLAVSDLAGIDIGYKVREGLSEEEKGDPRSF--CVADALVEQGRLGQKTGA 569
Query: 419 GFYLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
GFY YD + +A DPEV IE + V+ S+++I + + P++NE ++
Sbjct: 570 GFYQYDPQTRARISDPEVNALIEAKAAEYNVS----RRDFSDEEIRDRLLLPLINEGAKI 625
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA ++ D+D+ V G GFP Y
Sbjct: 626 LQEGIAQRSGDIDVVYVFGYGFPVYH 651
>gi|397688839|ref|YP_006526158.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 10701]
gi|395810395|gb|AFN79800.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 10701]
Length = 701
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 267/505 (52%), Gaps = 10/505 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L+ PV+ +EA LVD + LV +A +L+ R + +T +E
Sbjct: 152 MILSGAPVEAKEACEHQLVDELF-EGDLVDAGLAYARRLLQEDRGVRRSGEQTRGLEGAD 210
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A + A+ K++P L P+ CI VEA GL +E E F + L S +
Sbjct: 211 NA-ALIAARHAEVVKRSPGLFSPLRCIAAVEAATRLPLVEGLARERELFLECLNSPQRAA 269
Query: 121 LVHIFFAQRGTSKVPGVTDL--GLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
LVH FFA+R SK+ DL PR ++ A++GGG MG GIA + PV L EV
Sbjct: 270 LVHTFFAERQASKI---ADLPADTRPREIRTAAVIGGGTMGVGIALCFANAGVPVKLLEV 326
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+++ L+ + R R VK+G +++ + ++L+ G+ DY + DVD+V+EA+ E++
Sbjct: 327 SDEALQRALQRARDTYAISVKRGSLSEAAMAQRLALIEGITDYAALADVDLVVEAVFEDM 386
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
++KQQ+F L+ C P ILASNTS++DLN I T +VG HFFSPA+VM LLE+V
Sbjct: 387 AVKQQVFERLDAVCKPGAILASNTSSLDLNAIAAFTRRPQDVVGLHFFSPANVMRLLEVV 446
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R QTS +V+ + IG+K+KK +VVG C GF NRM F Y + A L+E G +D
Sbjct: 447 RGAQTSHEVLATAMAIGRKLKKVAVVVGVCDGFVGNRMLFQYGREAEFLLEEGATPQQVD 506
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+ FGM MGPF + DL G + A + P + + G+ T
Sbjct: 507 AVLRNFGMAMGPFAVRDLAGLDIGQAIRKRQRAILPAHLEFPTVADRLCAAGMLGQKTGV 566
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
G+Y Y+ + +P A + I+ + +L ++ IVE + +VNE ++
Sbjct: 567 GYYRYEPGNR-TPLENPALAPMLAAASREKGIERR--ELDKQYIVERTLYSLVNEGAKIL 623
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA +++D+DI + G GFP +R
Sbjct: 624 EEGIAQRSSDIDIIYLNGYGFPAWR 648
>gi|94314029|ref|YP_587238.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus metallidurans CH34]
gi|93357881|gb|ABF11969.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus metallidurans CH34]
Length = 715
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 236/429 (55%), Gaps = 7/429 (1%)
Query: 76 QAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVP 135
+A N CI VEA GL E F+ L+ K+L HIFFA+R K
Sbjct: 242 KARNALAQNACIRCVEAATQLPIADGLAFERAQFEALVAGNESKALRHIFFAEREAPKF- 300
Query: 136 GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQ 195
GLA R +++VA++G G MG GIA + + + PV+L E + L+ G+ +R N +
Sbjct: 301 -AEGKGLALRPIERVAVIGSGTMGVGIAMSFVNAGIPVMLIEREQAALDRGMALIRRNYE 359
Query: 196 SRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPH 255
KGK+ ++ + + +T L +E+ D D+V+EA+ E++++KQ IF L+ C P
Sbjct: 360 ITAAKGKLAPQQIDACMGRITPTLAFEAVADADLVVEAVFEDMAVKQAIFERLDALCKPS 419
Query: 256 CILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIG 315
ILA+NTS ++++ I T ++G HFFSPA+VM LLE+VR T VI + +
Sbjct: 420 AILATNTSRLNIDTIAASTKRPGDVIGLHFFSPANVMKLLEVVRGQATRADVIASCMAMA 479
Query: 316 KKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLAD 375
++I+K P++V C GF NRM PY + A L+E G +DRA+T+FGM MGP +AD
Sbjct: 480 QRIRKIPVLVRVCEGFVGNRMLTPYWREAGFLLEEGASPLQVDRALTQFGMAMGPLTMAD 539
Query: 376 LVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-RRKASPDPE 434
L G + AT + P S + + E R G+ T G+Y Y+ R PDP+
Sbjct: 540 LAGMDINWATRKRLAPTRPAHLRYSAVADRICELGRFGQKTNGGYYRYEPGSRTPIPDPQ 599
Query: 435 VKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASV 494
+ IE+ +G+ P +++++IVE ++NE R+ EGIA +A+D+D+ V
Sbjct: 600 IDALIEECAREAGITRRP----VADEEIVERCMLALINEGARILDEGIAQRASDIDVVYV 655
Query: 495 MGMGFPPYR 503
G GFP +R
Sbjct: 656 HGYGFPAWR 664
>gi|399991624|ref|YP_006571864.1| fatty acid oxidation complex subunit alpha [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398656179|gb|AFO90145.1| putative fatty acid oxidation complex subunit alpha [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 697
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 277/512 (54%), Gaps = 30/512 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEH---RRPWVATLYKTDKIE 57
M+ T + V EA G++D + N + ++LE RRP V + + ++
Sbjct: 151 MITTGRHVAAAEAFDKGVIDRIAEGNPR-EVGLAYTRELLEQNAPRRP-VCDMPAPEPVD 208
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPR--AGLQKEAEDFQKLLRS 115
+ R Q P + + V+A P G+++E E F KL+ S
Sbjct: 209 FDATYERVLVRGRGQ--------LSPAIAVRAVQA-ACEAPSFLDGVRQERELFMKLMES 259
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+ + L+H FF++R SK+P + D+ PR V + ++GGG MG+GIATA +L+ V+L
Sbjct: 260 DQRQGLIHAFFSERAVSKLPELVDV--FPRDVAAMGVIGGGTMGAGIATAALLAGLSVVL 317
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFE----KTISLLTGVLDYESFKDVDMVI 231
E +E A R+ NL+ +K+GK++Q +F+ +T+ L T DY + VD+V+
Sbjct: 318 IERDEAASVAARERIEGNLRGALKRGKISQSQFDAILNETLKLAT---DYAALSQVDLVV 374
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHV 291
EA+ E++ +K+ +FA L+++C P ILASNTS +D+N I T ++G HFFSPAHV
Sbjct: 375 EAVFEDMDVKRDVFAALDEHCKPGAILASNTSYLDINDIAAATSRPSDVIGLHFFSPAHV 434
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
M LLE+V +QT+P V+ +GK++KKT + G C GF NR+ Y +AA +V G
Sbjct: 435 MKLLEVVVADQTAPDVVATGFALGKRLKKTSVRSGVCDGFIGNRIMNSYRKAADYMVLDG 494
Query: 352 TDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKR 411
Y ID+ +T FG MGPF +ADL G + A + R ++ E
Sbjct: 495 ASPYQIDKVMTGFGFAMGPFAVADLAGLDIGWAARKRRAPTLDPRERVVHFSDMLCEGGD 554
Query: 412 AGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
G+ T +GFY+Y+E +R +P+P+V ++IE+ + GV P+ + +++ +
Sbjct: 555 FGQKTGRGFYVYEEGKRGGTPNPQVAEYIERDQRDQGVT--PQI--FANDEVLRRYMCAM 610
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
VNEA +V EGIA + D+D+ + G GFP +
Sbjct: 611 VNEAAKVVGEGIARRPLDVDMVLLFGYGFPRF 642
>gi|404253295|ref|ZP_10957263.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas sp. PAMC 26621]
Length = 681
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 272/507 (53%), Gaps = 29/507 (5%)
Query: 3 LTSK--PVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
LT+K P+ + A S GL+D + N L + A +A ++ + + TL +
Sbjct: 156 LTAKGDPIPAKLALSAGLIDRLANENNLEADAIAFAREVADTK-----TLPRARDKVAQA 210
Query: 61 EAREIFKFARAQARK----QAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
+ +F + A++ +AP I C++ G S G+ E ++F KL+
Sbjct: 211 APESVAQFKKDNAKRFRGFEAPAAN--IACVEKATDG--SSFDEGIAFERQEFMKLMMGV 266
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+ HIFFA+R +K+ G+ D + R +K+V ++G G MG GI+ + + PV +
Sbjct: 267 QSAAQRHIFFAERQAAKIDGI-DPKIPLREIKRVGVIGAGTMGGGISMNFLSAGIPVTIV 325
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E+ ++ L+ G G +R N ++ KG++ E+ E+ + LT LD+++ D D++IEA+ E
Sbjct: 326 EMAQEALDRGAGTIRKNYEASAAKGRLKPEQVEQAMGALTPTLDFDALADCDLIIEAVYE 385
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N+ +K++IF L+ P ILASNTS +D++ I T +VG HFFSPA+VM LLE
Sbjct: 386 NMDVKKEIFTRLDAIAKPGAILASNTSYLDIDEIASVTKRPGDVVGMHFFSPANVMKLLE 445
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR QT V+ ++ + K I+K +V G C GF NRM P A L+ G
Sbjct: 446 VVRGAQTEDDVLATVMALSKTIRKVAVVAGVCDGFIGNRMLKPRQVEAMKLLMEGATPEQ 505
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
ID+ FGMPMGPF+++DL G + IEN I + + R G+ T
Sbjct: 506 IDKVHVAFGMPMGPFQMSDLAGVDIGWHRDPTRIEN---------IRDALAAEGRWGQKT 556
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
KGFY YDE+R +P P V + IE RS S + + ++S+++IVE + +VNE
Sbjct: 557 GKGFYDYDEKRTPTPSPRVAEIIEDFRSKSNL----QKREISDQEIVEKTLYTMVNEGAL 612
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E +A +A+D+D+ + G G+P YR
Sbjct: 613 ILEEKMAQRASDIDVVWIYGYGWPVYR 639
>gi|115525778|ref|YP_782689.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas palustris BisA53]
gi|115519725|gb|ABJ07709.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodopseudomonas palustris BisA53]
Length = 694
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 272/506 (53%), Gaps = 20/506 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ +P+ EA GL++ +V + +A +L +RP K+
Sbjct: 152 MIVSGEPIGASEALQHGLIEEIV--EGPAAGGEAFARKVLAEKRPLRKLRDDDAKLAAAK 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
R IF A A K+A L P C D + A + GL+KE E F KL+ S+ K+
Sbjct: 210 ADRSIFTNAVAAMTKKARGLEAPFACADAIAAAIDLPFDEGLKKEREGFMKLVVSDQSKA 269
Query: 121 LVHIFFAQRGTSKV--PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+ FFA+R +KV P T PR V KVAI+G G MG GIA + + PV L E
Sbjct: 270 QRYAFFAEREAAKVEVPEATR----PRPVNKVAIIGAGTMGGGIAMSFANAGIPVTLIET 325
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
E+ L+ G+G ++ N ++ +G + + K + L+TGV+ E KD D++IEA+ E +
Sbjct: 326 GEEQLKRGLGIMQKNYEATAARGGIPADAPAKRMGLITGVVGLEHVKDADLIIEAVFETM 385
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
++K+++F L+ Y P +LASNTS ++++ I T ++G HFFSPA+VM L EIV
Sbjct: 386 AVKKEVFTALDAYAKPGAVLASNTSYLNIDEIAATTKRPQDVLGMHFFSPANVMKLCEIV 445
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +T+P ++ + I +KI K P VVG C GF NRM + A L+ G +D
Sbjct: 446 RAAKTAPDALLTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRAKQAEKLLFEGALPQQVD 505
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T K
Sbjct: 506 AVVTKFGMPMGPFAMGDLAGLDIG-------WRSRQDRGIKSEIADALCEAGRFGQKTGK 558
Query: 419 GFYLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y+ +A PDPEV+ I++ +D K + +++I+E + +P++NE R+
Sbjct: 559 GYYKYEAGSRAPLPDPEVETLIDQTLQK----LDLKRRAIDDQEILERMMYPMINEGARI 614
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
E IA + +D+D+ + G G+P YR
Sbjct: 615 LEEKIAARPSDIDVIWLYGYGWPIYR 640
>gi|400753263|ref|YP_006561631.1| fatty acid oxidation complex subunit alpha [Phaeobacter
gallaeciensis 2.10]
gi|398652416|gb|AFO86386.1| putative fatty acid oxidation complex subunit alpha [Phaeobacter
gallaeciensis 2.10]
Length = 748
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 171/512 (33%), Positives = 276/512 (53%), Gaps = 30/512 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEH---RRPWVATLYKTDKIE 57
M+ T + V EA G++D + N + ++LE RRP V + + ++
Sbjct: 202 MITTGRHVAAAEAFDKGVIDRIAEGNPR-EAGLAYTRELLEQNAPRRP-VCDMPAPEPVD 259
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPR--AGLQKEAEDFQKLLRS 115
+ R Q P + + V+A P G+++E E F KL+ S
Sbjct: 260 FDATYERVLARGRGQ--------LSPAIAVRAVQA-ACEAPSFLDGVRQERELFMKLMES 310
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+ + L+H FF++R SK+P + D +PR V + ++GGG MG+GIATA +L+ V+L
Sbjct: 311 DQRQGLIHAFFSERAVSKLPELVDA--SPRDVAAMGVIGGGTMGAGIATAALLAGLSVVL 368
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFE----KTISLLTGVLDYESFKDVDMVI 231
E +E A R+ NL+ +K+GK++Q +F+ +T+ L T DY + VD+V+
Sbjct: 369 VERDEAASVAARERIEGNLRGALKRGKISQSQFDAILNETLKLAT---DYAALSQVDLVV 425
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHV 291
EA+ E++ +K+ +FA L+++C P ILASNTS +D+N I T ++G HFFSPAHV
Sbjct: 426 EAVFEDMDVKRDVFAALDEHCKPGAILASNTSYLDINDIAAATSRPSDVIGLHFFSPAHV 485
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
M LLE+V +QT+P V+ +GK++KKT + C GF NR+ Y +AA +V G
Sbjct: 486 MKLLEVVVADQTAPDVVATGFALGKRLKKTSVRSDVCDGFIGNRIMNSYRKAADYMVLDG 545
Query: 352 TDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKR 411
Y +D+ +T FG MGPF +ADL G + A + R ++ E
Sbjct: 546 ASPYQVDKVMTGFGFAMGPFAVADLAGLDIGWAARKRRAPTLDPRERVVHFSDMLCEGGD 605
Query: 412 AGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
G+ T +GFY+Y+E +R +P+P+V ++IE+ + GV P+ + +++ +
Sbjct: 606 FGQKTGRGFYVYEEGKRGGTPNPQVAEYIERDQRDQGVT--PQI--FANDEVLRRYMCAM 661
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
VNEA +V EGIA + D+D+ + G GFP +
Sbjct: 662 VNEAAKVVGEGIARRPLDVDMVLLFGYGFPRF 693
>gi|359795628|ref|ZP_09298244.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Achromobacter
arsenitoxydans SY8]
gi|359366313|gb|EHK67994.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Achromobacter
arsenitoxydans SY8]
Length = 733
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 268/504 (53%), Gaps = 7/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT K + + A + GLVDA+ + + + +L T D +
Sbjct: 184 LMLTGKHLSADAALAAGLVDALASEEDPLDAGLAYTRQLLALNAGPRRTRDAADALSDRQ 243
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A + A L P + V A + GL+ E F + L S +
Sbjct: 244 AQLAAVDAAAERIATTARGLFSPARIVQAVRAAIEQPFDEGLRTERALFLQCLDSPQRAA 303
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R T+K+P + + RR+++V I+GGG MG+GIA A++ + PV++ E ++
Sbjct: 304 LVHAFFAERETAKIPELKEA--RARRLERVGIVGGGTMGAGIAVAVLDAGLPVVMVEQDD 361
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G RV VKKG+++ ++ ++ TG +Y++ + D++IEA+ E++++
Sbjct: 362 AALARGRARVEQVYDLLVKKGRISSDERAARLARFTGATNYDALGEADLIIEAVFEDMAV 421
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ +FA L++ P +LA+NTS +D+N I E T ++G HFFSPA++M LLE+V
Sbjct: 422 KQAVFAQLDRVAKPGAVLATNTSYLDVNQIAEATRGPADVLGLHFFSPANIMKLLEVVVG 481
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
T+P + ++ ++++KTP+ G C GF NR+ + QAA +++E G Y ID A
Sbjct: 482 RHTAPDTVATGFELARRLRKTPVRAGVCDGFIGNRILAVHRQAADMMMEDGASPYDIDAA 541
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG PMGP+++ADL G + AT + I + E G+ T +GF
Sbjct: 542 VRAFGYPMGPYQMADLAGGDIGWATRKRRAATRDPALRYVQIPDRLCERGWFGQKTGRGF 601
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R+ +PDP+V I+ R +GVA P ++ DI+ +VNEA V
Sbjct: 602 YLYPDGARQGTPDPDVLAIIDDERRRAGVAPRP----FTQDDILSRYLAAMVNEAANVLH 657
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
+GIA++ +D+D+ + G GFP YR
Sbjct: 658 QGIALRPSDIDVVFLSGYGFPRYR 681
>gi|170700585|ref|ZP_02891585.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
IOP40-10]
gi|170134491|gb|EDT02819.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
IOP40-10]
Length = 693
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 176/511 (34%), Positives = 274/511 (53%), Gaps = 26/511 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTAR--QWALDILEHRRPWVATLYKTDKIEP 58
M+++ + V+ E+ GL D ++ + L R Q A D E R + + + P
Sbjct: 152 MIVSGRIVRSEKLADTGLFDLIIEGDLLTGAVRFAQQAADRNELPR---LRDRRIEHVNP 208
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
G +FAR + N P C+D V+A V G++ E + F +L+ +
Sbjct: 209 DG----FLQFARNTIATASRNFPAPFKCVDAVQASVQQAFDDGIKFERKLFMELMDTSES 264
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAP----RRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L H FF +R +K+P L P R V +VA++G G MG+GIA + + V
Sbjct: 265 RALRHAFFGKRAGAKIPD-----LPPDTPVRTVTQVAVVGAGTMGAGIAMNFLSAGLQVT 319
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ E + LE G+ +R N +KGK+TQE+ E+ +SLLT L Y+ + D++IEA+
Sbjct: 320 ILETRQDALERGVAAIRKNYDDNARKGKLTQEQVEQRMSLLTPTLSYDDLRHADLIIEAV 379
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E +S+K+ +F +L+ ILASNTST+D++ I T +VG HFFSPA+VM L
Sbjct: 380 FEEMSVKESVFRELDAVAKHGAILASNTSTLDVDKIAAFTKRPCDVVGMHFFSPANVMEL 439
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE+VR +T+ V+ ++ + +KI KT +V G C GF NRM Y + A L++ G
Sbjct: 440 LEVVRGEKTAHDVLATVMSLARKIGKTAVVSGVCDGFIGNRMINQYLRQAGYLLDEGALP 499
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
IDRAI KFG MGPFR+ DL G + A + P+ Y S ++ E R G+
Sbjct: 500 EQIDRAIEKFGFAMGPFRMLDLSGNDIVWAIHKRHAVERPDIVY-SKTTHLLCEMGRFGQ 558
Query: 415 TTRKGFYLYDE-RRKASPDPEVKKFI-EKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
+ G+Y Y RKA P V I +++R + ++ + +S+ +IVE + + +VN
Sbjct: 559 KSGAGWYDYKAGDRKAYPSLAVNDMIVQQSRD---IGLERRV--ISDDEIVERLVYALVN 613
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R+ EGIA KA+D+D+ + G GFP +R
Sbjct: 614 EGARILEEGIASKASDIDVVYLTGYGFPVFR 644
>gi|296136057|ref|YP_003643299.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Thiomonas
intermedia K12]
gi|295796179|gb|ADG30969.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Thiomonas
intermedia K12]
Length = 697
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 174/508 (34%), Positives = 267/508 (52%), Gaps = 20/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ + V + + L DAVV + +V A +A + E +P T ++ L
Sbjct: 153 MIVSGEAVPAKMLAATALFDAVV-EDDVVGAAAAFARHLAESTKP-------TPRVRDLA 204
Query: 61 ----EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
A +F R Q P+ + C++ V AG + G+ +E F L+ +
Sbjct: 205 VNHDNAEAFIQFTRTTVAAQFPHEPARLQCVEAV-AGSLKPFNEGMLRERSLFAMLMATP 263
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L H FFA+R SK+ G R + +V ++G G MG GI+ + + +PV L
Sbjct: 264 ESQALRHAFFAERAASKI-GDVPADTPTRPIARVGVIGAGTMGGGISMNFLNAGFPVTLV 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E ++ L+ G+ + N + KKGK+ E+ +K ++LL LD+ D D+VIEA+ E
Sbjct: 323 ETTQEALDRGVATIHKNYDNSAKKGKLKPEQVDKRMALLRPTLDFAQLADCDLVIEAVFE 382
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+ +F L+ P ILASNTST+DL+ I T ++G HFFSPA+VM LLE
Sbjct: 383 TMEVKRDVFERLDAIAKPGAILASNTSTLDLDAIAAYTKRPQDVIGMHFFSPANVMKLLE 442
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+VR T+ + ++ + K I+KT +V G C GF NRM Y + A LVE G
Sbjct: 443 VVRGKATAKDALATVMKLAKTIRKTAVVSGVCDGFIGNRMIEHYGRMANFLVEEGASPQQ 502
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+DRA+ +GM MGPFR+ DL G + A + P Y S + + E R G+ T
Sbjct: 503 VDRALEAWGMAMGPFRMGDLAGNDIGWAIRKRRYVEKPNVMY-SRLADRLCEQGRYGQKT 561
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KG+Y Y+ R A PDPEV I R GV P+ K+ + +IV+ + +VNE
Sbjct: 562 GKGWYRYEAGNRAALPDPEVDALITAYRQEIGVT--PR--KIDDAEIVDRCLYALVNEGA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ AEGIA +A+D+D+ + G GFP +R
Sbjct: 618 RLLAEGIAQRASDIDMVYLAGYGFPAWR 645
>gi|297623637|ref|YP_003705071.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Truepera
radiovictrix DSM 17093]
gi|297164817|gb|ADI14528.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Truepera
radiovictrix DSM 17093]
Length = 693
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 176/509 (34%), Positives = 275/509 (54%), Gaps = 13/509 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ +P+ EA +LGLVD ++ L++ A +A + + RRP + +P
Sbjct: 154 LMLSGEPIGAREAAALGLVDELIE-GDLLAGAVAFAERVAD-RRPLPRLSARRAAPDP-- 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E ARA+ ++A L P +++VEA G + E E F + S ++
Sbjct: 210 ---EAVAAARAELDRRAQGLLSPHFIVELVEAATERPFEEGTRLERERFLQARSSPQSRA 266
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+FFA+R +KV GV R V++V ++G G MG GIA + + + PV L E +
Sbjct: 267 LRHLFFAERAAAKVAGVGKE-TPTREVRRVGVVGAGTMGGGIAMSFLNAGVPVTLLEADA 325
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE G+ VRAN ++ +KG+++ E+ + LT L+ + + D++IEA+ E++ +
Sbjct: 326 GALERGLATVRANYEASARKGRLSGEEVAARLGRLTPTLEPSALAEADLIIEAVFEDMEV 385
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L+ P ILA+NTST+D+N I T + ++G HFFSPA+VM L+EIVR
Sbjct: 386 KKEVFGRLDALAKPGAILATNTSTLDVNEIAAATSRPEDVLGLHFFSPANVMKLVEIVRG 445
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS +V+ L + K++ K +VVG C GF NRM Y + A LVE G + +D A
Sbjct: 446 ERTSAEVLATALKLTKRLGKVGVVVGVCDGFVGNRMIHAYVREAQRLVEEGAAPHEVDGA 505
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG+PMGPF + DL G + A Q ++ + E R G+ T+ G
Sbjct: 506 MHAFGLPMGPFEMGDLAGLDIGYAI-RQHRAKLAGAPKPDDLLDRIVERGRKGQKTKAGV 564
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y Y E RK P EV I+ R+ GV P+ L +++I + + + +VNEA R+ E
Sbjct: 565 YDYPEGRKGVPSAEVAALIDALRAERGVT--PR--TLGQEEITKRLLYTLVNEAARILEE 620
Query: 481 GIAVKAADLDIASVMGMGFPPYRFVTFIH 509
G+A +A D+D+ G GFP YR H
Sbjct: 621 GVAARAGDIDVIYRYGYGFPAYRGGPLHH 649
>gi|254476527|ref|ZP_05089913.1| peroxisomal bifunctional enzyme [Ruegeria sp. R11]
gi|214030770|gb|EEB71605.1| peroxisomal bifunctional enzyme [Ruegeria sp. R11]
Length = 697
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 153/404 (37%), Positives = 237/404 (58%), Gaps = 8/404 (1%)
Query: 101 GLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGS 160
GL++E E F +L+ S+ + L+H FF++R SK+P + D+ PR V V ++GGG MG+
Sbjct: 245 GLRRERELFTELMESDQRQGLIHAFFSERAVSKLPELADV--TPRDVASVGVIGGGTMGA 302
Query: 161 GIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK-TISLLTGVL 219
GIATA +L+ V+L E + EA R+ NL +K+GK++Q++F+ T L
Sbjct: 303 GIATAALLAGVSVVLVERDASAAEAAGQRISGNLSGALKRGKISQDQFDTMTGDALELAT 362
Query: 220 DYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDR 279
+Y + VD+VIEA+ E++ +K+++F L+ C P ILASNTS +D+N I T
Sbjct: 363 EYGALGQVDLVIEAVFEDMDVKREVFEALDANCKPGAILASNTSYLDINEIAAATSRPQD 422
Query: 280 IVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFP 339
++G HFFSPAHVM LLE+V +QT P V+ +GK+++K + G C GF NR+
Sbjct: 423 VIGLHFFSPAHVMKLLEVVVADQTDPDVVATGFALGKRLRKISVRSGVCDGFIGNRIMNA 482
Query: 340 YTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK 399
Y +AA +V G Y IDR +T FG MGPF + DL G + A + + R
Sbjct: 483 YRKAADYMVLDGASPYQIDRVMTGFGFAMGPFAVGDLAGLDIGWAARKRRAPHRDPRERV 542
Query: 400 SMIIPIMQEDKRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLS 458
++ E G+ T KGFY+Y+ +R +P+P+V+K+I + ++ GV+ P+ + S
Sbjct: 543 VHFADMLCEGGDFGQKTGKGFYVYEAGKRGGTPNPDVEKYIAQDQADQGVS--PR--EFS 598
Query: 459 EKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
+ +I+ +VNEA +V EGIA + D+D+ + G GFP Y
Sbjct: 599 DAEILRRYMCAMVNEAAKVVGEGIARRPLDVDMVLLFGYGFPRY 642
>gi|374288523|ref|YP_005035608.1| fatty acid oxidation complex subunit alpha [Bacteriovorax marinus
SJ]
gi|301167064|emb|CBW26643.1| fatty acid oxidation complex subunit alpha [Bacteriovorax marinus
SJ]
Length = 706
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 269/505 (53%), Gaps = 16/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++LT K +K ++A LGLV A V P + + + E + +L +
Sbjct: 166 VILTGKMLKAKKAKRLGLV-AGVYPKERIKKMASFHFGGDEKKGGLKESLEHIAS-DNFF 223
Query: 61 EAREIFKFARAQARKQAPNLTH-PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+ IF+ AR K+ P+ +DV+EAG++ G + L E++ F +L SE K
Sbjct: 224 AKKIIFQKARESVLKKTKGFYQAPLKILDVMEAGIMKGRSSYLAAESQAFGELCVSEQSK 283
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+L HIFF K G G PR +KK A LG G MG GIA + + ++K++
Sbjct: 284 NLQHIFFMTETAKKYSGPESSGNLPR-LKKGAALGAGTMGGGIAWLMANNGMAPLMKDLT 342
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ LE G + +N VK+ +MT+++FE+ + G + Y+ F+ VD+VIEAI+EN++
Sbjct: 343 PEALELGYKQSSSNFMGAVKRKRMTRDEFERKQRSIQGQVGYDGFERVDLVIEAIVENMN 402
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+ +F+++E C++ SNTS++ + + + +R G HFF+P H+MPL+EI+
Sbjct: 403 IKKSVFSEVETKVRKDCVITSNTSSLSVQEMSTALENPERFAGLHFFNPVHMMPLVEIIT 462
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
++ +P+ + L + K+KKTP++V + GF VNR+ P+ A L+E G + ID
Sbjct: 463 HDKVAPETLEALYNWCMKVKKTPVIVKDGPGFLVNRILMPFMNEAGFLLEEGVPMKDIDD 522
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
A FGMPMGP RL D VG V + +R S + E G+ KG
Sbjct: 523 ACLNFGMPMGPCRLLDEVGIDVGEKVAKIIHDGLGDRVKSSPFSSKLVEKNFLGKKNGKG 582
Query: 420 FYLYDERRKA-SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
FY+YD+R K P+ EV+ + K + K+ E +I IF P++NEA V
Sbjct: 583 FYIYDKRGKVEGPNEEVQAMLPKTKK-----------KMDETEIQMRIFLPMINEAATVL 631
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
A+GI AA +D+ + G+GFPP+R
Sbjct: 632 ADGIVESAAQVDLGLIFGIGFPPFR 656
>gi|407779694|ref|ZP_11126947.1| enoyl-CoA hydratase [Nitratireductor pacificus pht-3B]
gi|407298464|gb|EKF17603.1| enoyl-CoA hydratase [Nitratireductor pacificus pht-3B]
Length = 690
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 174/504 (34%), Positives = 261/504 (51%), Gaps = 23/504 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++++ KPV E+A +LG VDAV A L + A + + P + +K L
Sbjct: 152 IIVSGKPVGMEKAQALGAVDAV-ADGDLRAAAMAFLRAKIAEDGPHRHIRARDEK---LA 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F+ A A A K+A LT P+ + V + L +E E F + S +
Sbjct: 208 VDLDAFEAAVADATKKARGLTAPLTAAEAVRNAITMAFDDALARERELFLERRDSLESAA 267
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
H+FFA R +KVPG+ A R ++K A++G G MG+GIA AL V L E+N
Sbjct: 268 QRHLFFATREATKVPGIARDTQA-RPIEKAAVIGAGTMGAGIAMALANGGIEVRLLELNA 326
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ LE G+G++ VK+G + + E ++ ++G DY + D D+ IEA+ E++ +
Sbjct: 327 EALERGLGQIDKTYAGSVKRGSIDAAEKEARLARISGTTDYAALSDCDIAIEAVFEDMGV 386
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K ++F L+K P ILASNTS +DL+ I T +VG HFFSPAHVM LLEIVR
Sbjct: 387 KHKVFGALDKVMKPGAILASNTSYLDLDEIAASTGRPQDVVGLHFFSPAHVMRLLEIVRG 446
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ T+P+V+ L + ++I K P+VVG C GF NRM + L+ G +DR
Sbjct: 447 DHTAPEVLASALALARRIGKVPVVVGVCNGFVGNRMLAARREENESLLLSGATPEQVDRV 506
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI---MQEDKRAGETTR 417
FG PMGPF + DL G + ++ R + P+ + E G+
Sbjct: 507 FADFGWPMGPFAMVDLAGLDI----------SWKHRQSLGLTAPVADALCEAGHFGQKAG 556
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+GFYLY D R PDP V + IE+ G+ + + ++I E +P++NE R
Sbjct: 557 RGFYLYEDGSRTPKPDPFVAELIERKADELGI----ERRTVGAEEITERTLYPMINEGAR 612
Query: 477 VFAEGIAVKAADLDIASVMGMGFP 500
+ EGIA +A+D+D+ V G GFP
Sbjct: 613 IVEEGIAARASDVDVVWVNGYGFP 636
>gi|339328360|ref|YP_004688052.1| fatty acid oxidation complex subunit alpha [Cupriavidus necator
N-1]
gi|338170961|gb|AEI82014.1| fatty acid oxidation complex subunit alpha [Cupriavidus necator
N-1]
Length = 702
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 167/517 (32%), Positives = 276/517 (53%), Gaps = 35/517 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++L+ + V EA LG+VDA+V L + A ++A D+ R PL
Sbjct: 153 VILSGRHVSAGEAQRLGIVDAIVEGIDLKAAAIRFAKDVASQR--------------PLP 198
Query: 61 EAREIFK------------FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAED 108
AR++ + AR K++ ++ P ++ V+A + G+ EAE
Sbjct: 199 RARDMVQRVATDAAMASLDAARKSIAKKSRHVKAPAYALECVQAALTMPFDEGVALEAER 258
Query: 109 FQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL 168
F +L S+ K+L + FFA+R +KVPG +R+ A++G G MGSGIA +
Sbjct: 259 FVELESSDEAKALRYAFFAEREAAKVPGAAPAA-KTQRIGSAAVIGAGTMGSGIAMSYAD 317
Query: 169 SNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVD 228
+ PV + EV+ + L+ G+ R++ RVK+G ++Q + ++L+ GV YE+ D D
Sbjct: 318 AGIPVKVLEVSREALDRGMQRIQDTYAVRVKRGSLSQGDMDARMALIEGVQSYEAIADCD 377
Query: 229 MVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSP 288
V+EA+ E + +KQ+IF L+ P +L +N+S ID++++ + T + GAHFF+P
Sbjct: 378 AVVEAVFERIDIKQEIFGRLDTVMKPGALLLTNSSAIDIDIMADATARPQDVAGAHFFAP 437
Query: 289 AHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLV 348
A+VM L E+VR ++TSP+ + + + + + + K V G+C GFA NR P L++
Sbjct: 438 ANVMKLCEVVRGSKTSPETVANAMKMARDMGKVCAVAGSCDGFATNRSRAPMMTETMLML 497
Query: 349 ERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI-MQ 407
E G ID+ + FG PMGPF + D+ G V+ + E PE Y+ + +P +
Sbjct: 498 EEGATPEQIDKVMVDFGYPMGPFAVNDISGLDVSYEGRKRRAEANPE--YRKLHVPDRLV 555
Query: 408 EDKRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMI 466
E R G+ T G+Y Y E R PD VK+ I + G+ P+ ++++I+ +
Sbjct: 556 EMGRKGQKTGAGWYAYREGDRTPYPDDVVKQVIAEVAEEFGI---PQR-TFTDQEILHRL 611
Query: 467 FFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
F VNEAC++ EG A +A+D+D+ + G GFP +R
Sbjct: 612 LFASVNEACKILEEGKAYRASDIDVMWLYGFGFPRHR 648
>gi|254473846|ref|ZP_05087240.1| peroxisomal bifunctional enzyme [Pseudovibrio sp. JE062]
gi|211956956|gb|EEA92162.1| peroxisomal bifunctional enzyme [Pseudovibrio sp. JE062]
Length = 717
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 277/512 (54%), Gaps = 26/512 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + P+ + A + G++D V V+ +A ++++ P L + ++
Sbjct: 158 MIPSGAPIGADAAKAAGILDGVSEEADAVAAGLAFARSVIDNGTP----LRRCSELVAPA 213
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
++F A+A K+A P+VC++ +E + G+ KE E F +L S ++
Sbjct: 214 VDAQVFADAKAAVAKRARGQKSPVVCVEAIEMASQTSFADGMAKEREMFMELKNSAQHRA 273
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H FFA R K+P + G+APR +K + ++GGG MG+GIAT +++ V L E ++
Sbjct: 274 LAHAFFADRALGKLPEIE--GIAPRTLKSIGVIGGGTMGAGIATGALMNGLSVTLIERDD 331
Query: 181 KFLEAGIGRVRA----NLQSRVKKGKMTQEK----FEKTISLLTGVLDYESFKDVDMVIE 232
+ G+GR +A N+ VKKGK++ E+ F++ +SL T DY S DVD+V+E
Sbjct: 332 E----GLGRAKATIAKNVGGAVKKGKLSAEQEQRIFDEALSLST---DYVSLSDVDLVVE 384
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A+ E++ +K+Q+F L++ C +LA+NTS +D+N I T ++G HFFSPAH+M
Sbjct: 385 AVFEDIDVKKQVFQKLDEVCKEGAVLATNTSYLDVNAIAAVTKRPQDVIGLHFFSPAHIM 444
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
LLE+V ++T+P VI +GK ++K + G C GF NR+ Y AA +V G+
Sbjct: 445 KLLEVVVADKTAPDVIATGFQLGKIMRKVAVRAGVCDGFIGNRILATYRAAADAIVVDGS 504
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRA 412
+ +D + +FG PMGP+ ++DL G + AT + R M E
Sbjct: 505 TPFEVDDVMLEFGFPMGPYAVSDLAGLDIGWATRKRKAPTRDPRERYFTFADRMCEQGWF 564
Query: 413 GETTRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ T KG+Y+Y D RK +P+P V + + R + LS++ I++ +V
Sbjct: 565 GQKTSKGYYVYEDGARKGTPNPAVLDILTEERKEKQI----NAQNLSKEQILDRYMAAMV 620
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NEA +V EGIA++ D+D+ + G GFP +R
Sbjct: 621 NEAAKVVEEGIALRPLDVDMTLIYGYGFPRWR 652
>gi|222622587|gb|EEE56719.1| hypothetical protein OsJ_06221 [Oryza sativa Japonica Group]
Length = 448
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 136/250 (54%), Positives = 185/250 (74%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + +E GLVDA+ +P++L+ +R WAL+I +R+PW+ +L +TD++ L
Sbjct: 163 MMLQSKFITAKEGKEGGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLS 222
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + AR QA+K A NL C+DV+E GV+ G AG+ KEA+ F++L+ S T K+
Sbjct: 223 EARSVLNSARQQAKKVAANLPQHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKA 282
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR T+KVPGVTD+ L PR+++KVA++GGGLMGSGIATAL++SN V+LKEVN
Sbjct: 283 LVHAFFAQRLTTKVPGVTDVQLKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNP 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+ G + ANL+ VK+G +T++K K +SLL G LDY FKDVDMVIEA+IE + L
Sbjct: 343 QFLQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPL 402
Query: 241 KQQIFADLEK 250
KQ IF+DLEK
Sbjct: 403 KQSIFSDLEK 412
>gi|70728857|ref|YP_258606.1| enoyl-CoA hydratase [Pseudomonas protegens Pf-5]
gi|68343156|gb|AAY90762.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Pseudomonas protegens Pf-5]
Length = 706
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 172/508 (33%), Positives = 266/508 (52%), Gaps = 16/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + + EA LG+VD + ++ +A ++++ A + +T LG
Sbjct: 157 LMLSGRHLNAREALDLGVVDRLAEGEDALAAGLAYARELVDSH----AGVRRTRDARALG 212
Query: 61 EA---REIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ RE AR Q +A L P I VEA + GL++E FQ+ L S
Sbjct: 213 DQHLQREQINAAREQLTHKAKGLLSPQNIIRAVEAALDRPFDQGLEEERRLFQECLDSPQ 272
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
LVH FFA+R K P PR +++VA++GGG MG+GIA + + + V + E
Sbjct: 273 RAGLVHAFFAEREVLKAPETRIA--QPRPIEQVAVVGGGTMGAGIAVSALDAGLQVTMIE 330
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+++ L+ G G V ++KG++ T++ LDY+ D+VIEA+ E+
Sbjct: 331 RDQQALDRGRGNVEKVYDGLIEKGRLDAAGKAATLARFRASLDYQDLARADLVIEAVFED 390
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++ KQ +F +L++ C P +LASNTS +DLN I + ++G HFFSPA++M LLEI
Sbjct: 391 MAAKQAVFKELDRVCKPGAVLASNTSYLDLNAIADSVSRPADVIGLHFFSPANIMKLLEI 450
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + +P V+ ++ KK++K P+ G C GF NR+ Y QAA ++E G Y I
Sbjct: 451 VVPAKVAPDVVATAFELAKKLRKVPVRAGVCDGFIGNRILAVYRQAADYMMEDGASPYQI 510
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
D+A+ FG PMGPF++ADL G + AT + P+ Y I + E G T
Sbjct: 511 DQALRDFGFPMGPFQVADLAGGDIGWATRKRKAATRNPDARY-VQIADRLCERGWFGHKT 569
Query: 417 RKGFYLYDER-RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
+G+YLY + R A+ DPEV I+ R+ +G+ P +I+ ++NE
Sbjct: 570 GRGYYLYAQGPRNATQDPEVLAIIDAERARAGITPRP----FGNPEILRRYMAAMINEGA 625
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
V EGIA++ D+DI + G GFP YR
Sbjct: 626 NVVHEGIALRPLDVDITFIHGYGFPRYR 653
>gi|119474779|ref|ZP_01615132.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2143]
gi|119450982|gb|EAW32215.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2143]
Length = 694
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 168/511 (32%), Positives = 274/511 (53%), Gaps = 30/511 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + + +EA + GL+ +V L A +A ++ +P V + +I+
Sbjct: 155 MVTSGDQIGADEALASGLISEIV--TDLRGDAIAFAKKVVAEGKPLVRIRDQNAEIDAAK 212
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGP-RAGLQKEAEDFQKLLRSETCK 119
E+F R +++ P I +EA V S GL+ EA+ F++L+
Sbjct: 213 AKPELFSNIRKAIARKSRGFKAPEYNIRCIEAAVNSDNFDDGLKVEADLFRELMTGGQSA 272
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRR-----VKKVAILGGGLMGSGIATALILSNYPVI 174
+ H FFA+R +K+P V P+ + V ++G G MG GI+ ++ PV
Sbjct: 273 AQRHFFFAERQAAKIPDV------PKETPEIEINSVGVIGAGTMGGGISMNILNIGTPVT 326
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ E ++ L+ GI VR N ++ KKG+++Q+ E ++LLTG L+ E D D+VIEA+
Sbjct: 327 IVETTQEALDRGIAIVRKNYENTAKKGRISQQDVEDRMALLTGSLNIEDLADCDLVIEAV 386
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
EN+ +K++IFA L+K ILASNTS +D+N I T + ++G HFFSPA+VM L
Sbjct: 387 FENMKVKKEIFAKLDKIVKQGAILASNTSALDVNEIASATVRPESVIGLHFFSPANVMKL 446
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE+VR +++S VI + K+I K +VG C GF NR+ P Q A L+ G
Sbjct: 447 LEVVRGDKSSHPVIKTSMAFAKRIGKVAALVGVCPGFVGNRILAPRQQQAQQLILEGALP 506
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRA 412
+ +D+ + FG PMGPF+++DL G + + E T K ++ + E R
Sbjct: 507 HQVDKVLFDFGKPMGPFQMSDLAGLDIG----------WSEETSNGKEVLRDRLVEAGRR 556
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ T G+Y YDE R SP PE++K I + +G ++S+++I+ +P++N
Sbjct: 557 GQKTSAGYYDYDENRVPSPSPEIEKIILEFSEKNG----KTRREISDEEILIRCIYPMIN 612
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E ++ EGIA++++D+D+ V G G+P YR
Sbjct: 613 EGAKILEEGIAIRSSDIDVVWVYGYGWPIYR 643
>gi|260431228|ref|ZP_05785199.1| peroxisomal bifunctional enzyme [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415056|gb|EEX08315.1| peroxisomal bifunctional enzyme [Silicibacter lacuscaerulensis
ITI-1157]
Length = 698
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 175/511 (34%), Positives = 271/511 (53%), Gaps = 25/511 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA--PNQLVSTARQWALDILEHRRPWVATLYKTDKIEP 58
M+ T + V+ +EA LG++D V P ++ Q LD RR V + D ++
Sbjct: 151 MITTGRHVRADEALKLGVIDKVQDGDPREIGLAYAQELLDTGAPRRA-VGEMPAPDPVDF 209
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+ K R Q C EA + G+ +E E F +L+ S+
Sbjct: 210 DAVYEAVLKKGRGQLSPAVAVRAVQAAC----EAPSFA---EGMARERELFMQLMESDQR 262
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
K L+H FFA+R K+P + G+ PR V ++ ++GGG MG+GIATA +L+ PV L E+
Sbjct: 263 KGLIHAFFAERAVGKLPELK--GVEPRPVHQIGVIGGGTMGAGIATAALLAGLPVTLLEM 320
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTIS----LLTGVLDYESFKDVDMVIEAI 234
++ A R+ NL +K+GK++Q++ + +S L TG Y++ VD+VIEA+
Sbjct: 321 TQEAAHAAKDRIAGNLAGALKRGKISQQQHDAILSDQLQLATG---YDALSAVDLVIEAV 377
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++ +K+Q+FA L+ C P +LA+NTS +D+N I T ++G HFFSPAHVM L
Sbjct: 378 FEDMDVKKQVFAQLDAVCKPGAVLATNTSYLDVNEIAAATTRPQDVIGLHFFSPAHVMKL 437
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LEIV ++T+P+V+ +G ++KK + G C GF NR+ Y A +V G
Sbjct: 438 LEIVVADKTAPEVVATGFALGHRLKKVSVRAGVCDGFIGNRILSTYRTCADHMVLDGASP 497
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTYKSMIIPIMQEDKRAG 413
+ ID+A+T FG MGPF ++DL G + A + E R S + E G
Sbjct: 498 FQIDKALTDFGFAMGPFAVSDLAGLDIGWAVRKRKRAEGLDPRARDSSYADKLCEAGHFG 557
Query: 414 ETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
+ T +G Y+Y++ +R +P+ EV I R+ G I P+ ++ +IV +VN
Sbjct: 558 QKTGQGSYVYEKGKRGGTPNSEVLDLIAADRAAQG--ITPR--TFTDDEIVRRYMVSMVN 613
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
EA +V EGIA + D+D+ + G GFP YR
Sbjct: 614 EAAKVVGEGIARRPLDVDVVLLYGYGFPRYR 644
>gi|116694675|ref|YP_728886.1| enoyl-CoA hydratase/isomerase family protein [Ralstonia eutropha
H16]
gi|113529174|emb|CAJ95521.1| Enoyl-CoA hydratase/isomerase family [Ralstonia eutropha H16]
Length = 692
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/516 (33%), Positives = 272/516 (52%), Gaps = 28/516 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + V A +GLVD + L + A +A ++ +RP DK+
Sbjct: 155 MVTSGTHVAASAAAEMGLVDLLTDDASLRADAVAFARKVVAEKRPLRKVRESDDKVAAAR 214
Query: 61 EAREIFK-FARAQARK----QAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
E+F F +A AR+ AP I CI EA V AGL++E E F +LL
Sbjct: 215 GKPELFAAFRKANARRFRGFDAPEFN--IRCI---EAAVELPFEAGLKRERELFTELLNG 269
Query: 116 ETCKSLVHIFFAQRGTSKVP--GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
+ + FFA R VP G LA V+++ I+G G MG GIA + + YPV
Sbjct: 270 TQSAAQRYYFFASRQVWNVPDVGADTPALA---VRRIGIVGAGTMGGGIAMNFLNAGYPV 326
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
+ E +++ L+ G+ +RAN + +KG+++ E ++LLT LD + D D++IEA
Sbjct: 327 TIVESSQQALDRGLKTIRANYDNTARKGRLSAADVEARMALLTPTLDLQLLADADLIIEA 386
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
+ EN+ +KQ++F L++ ILA+NTS +D+N+I + + ++G HFFSPA+VM
Sbjct: 387 VFENMEVKQELFGKLDRIAKAGAILATNTSALDVNVIAAASSRPEAVIGLHFFSPANVMK 446
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
LLE+VR ++T+ VI +++ +KI K +VG C GF NRM + A LV G
Sbjct: 447 LLEVVRGDKTAKPVIRTAMELARKIGKVAALVGVCPGFVGNRMLAQRQREAQKLVLDGAL 506
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAG 413
+ +DR + FG PMGPF ++DL G + E++ S + ++ E R G
Sbjct: 507 PWDVDRVLYDFGFPMGPFAMSDLAGLDLGWVR---------EKSSGSTLREVLCEMDRRG 557
Query: 414 ETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
+ G+Y YDE+R A P P V++ I + G +SE++I++ +P++NE
Sbjct: 558 QKAGAGYYDYDEQRNAKPSPVVEQVIRDFAAKQG----RNSRVVSEQEILDRCIYPMINE 613
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIH 509
++ EG A++A+D+D+ V G G+P YR I+
Sbjct: 614 GAKILQEGKAIRASDIDVIWVNGYGWPVYRGGPMIY 649
>gi|221067466|ref|ZP_03543571.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
gi|220712489|gb|EED67857.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
Length = 706
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 267/510 (52%), Gaps = 9/510 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + K V+ +EA LGLVDA+ + L + +AL + + P + L P G
Sbjct: 163 LITSGKHVEAKEALELGLVDAIF-EDDLEQASLMFALSMADSH-PALPVLADIQAPPPKG 220
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E + F R +A N I V + + GL KE E F++L+ KS
Sbjct: 221 ELPD-FDRLRTGINPKARNAIAQRAAIQCVRSAMDLPFEQGLDKERELFEELVVGAPSKS 279
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L HIFFA++ +K G D +A R++ +V ILG G MG GIA A + PV+L E +
Sbjct: 280 LRHIFFAEKEAAKFVG-RDCDVAERQICRVGILGAGTMGGGIAMAFANAGIPVVLCEREQ 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ + N Q V +G +T E ++ + + LD +F +VD+VIEA+ E++++
Sbjct: 339 AALDRGMAMIERNYQISVSRGGLTAEAVKERMQHIQQTLDLSAFAEVDLVIEAVFEDMAI 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F L++ C ILA+NTS +++N I T + ++G HFFSPA+VM LLE+VR
Sbjct: 399 KRDVFVQLDRICRKGTILATNTSRLNINEIAAVTQRPEDVIGLHFFSPANVMKLLEVVRG 458
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T VI + + I K P++VG C GF NRM Y + A L+E G + ID A
Sbjct: 459 ERTCDAVIASCMQMAVAIGKIPVLVGVCEGFVGNRMLTGYWREAGFLLEEGATVQQIDAA 518
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG MGP +ADL G + AT + S + + E R G+ T G+
Sbjct: 519 MQAFGFAMGPLAMADLAGLDINWATRKRLASTRASHLRYSRVADSICEQGRFGQKTGAGY 578
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R PDP V+ I + ++G+ + ++ +++IVE +VNE R+
Sbjct: 579 YRYEAGNRTPVPDPFVEALIAECARVAGI----ERRRVRDEEIVERCVLALVNEGARIVD 634
Query: 480 EGIAVKAADLDIASVMGMGFPPYRFVTFIH 509
EGIA +A+D+D+ V G GFP +R H
Sbjct: 635 EGIAQRASDVDVVYVNGYGFPAWRGGPMFH 664
>gi|395492969|ref|ZP_10424548.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas sp. PAMC 26617]
Length = 681
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 268/503 (53%), Gaps = 21/503 (4%)
Query: 3 LTSK--PVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
LT+K P+ + A S GL+D + N L + A +A ++ + + P K + +P
Sbjct: 156 LTAKGDPIPAKLALSAGLIDRLANENNLEADAIAFACEVADTK-PLPRARDKVAQADP-- 212
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EA FK A+ + I C++ G S G+ E ++F KL+ +
Sbjct: 213 EAVAAFKKDNAKRFRGFEAPAANIACVEKATDG--SSFDEGIAFERQEFMKLMMGVQSAA 270
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
HIFFA+R +K+ G+ D + R +K+V ++G G MG GI+ + + PV + E+ +
Sbjct: 271 QRHIFFAERQAAKIDGI-DPKIPLREIKRVGVIGAGTMGGGISMNFLSAGIPVTIVEMAQ 329
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G +R N ++ KG++ E+ E+ + LT D+E+ D D++IEA+ EN+ +
Sbjct: 330 EALDRGAATIRKNYEASAAKGRLKPEQVEQAMGALTPTFDFEALADCDLIIEAVYENMDV 389
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K++IF L+ P ILASNTS +D++ I T +VG HFFSPA+VM LLE+VR
Sbjct: 390 KKEIFTRLDAIAKPGAILASNTSYLDIDEIASVTKRPGDVVGMHFFSPANVMKLLEVVRG 449
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
QT V+ ++ + K I+K +V G C GF NRM P A L+ G ID+
Sbjct: 450 AQTEDDVLATVMALSKTIRKVAVVAGVCDGFIGNRMLKPRQVEAMKLLMEGATPEQIDKV 509
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
FGMPMGPF+++DL G + IEN I + + R G+ T KGF
Sbjct: 510 HVAFGMPMGPFQMSDLAGVDIGWHRDPNRIEN---------IRDALAAEGRWGQKTGKGF 560
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y YDE+R +P V + IE RS S + + ++S+++IVE + +VNE + E
Sbjct: 561 YDYDEKRNPTPSARVAEIIEDFRSKSNL----QKREISDQEIVEKTLYTMVNEGALILEE 616
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
+A +A+D+D+ + G G+P YR
Sbjct: 617 KMAQRASDIDVVWIYGYGWPVYR 639
>gi|254510901|ref|ZP_05122968.1| peroxisomal bifunctional enzyme [Rhodobacteraceae bacterium KLH11]
gi|221534612|gb|EEE37600.1| peroxisomal bifunctional enzyme [Rhodobacteraceae bacterium KLH11]
Length = 697
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/507 (34%), Positives = 272/507 (53%), Gaps = 19/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA--PNQLVSTARQWALDILEHRRPWVATLYKTDKIEP 58
M+ T + V+ EA +G++D + P ++ + L RRP + + + I+
Sbjct: 151 MITTGRHVRAAEALEMGVLDKIGEGDPREVGLAYTRALLAANTPRRP-ICEMPTPEPIDF 209
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+ K R Q C EA + +GL +E E F +L+ S+
Sbjct: 210 DARYEAVLKKGRGQLSPAVAVRAVQAAC----EADDFA---SGLVRERELFTELMASDQR 262
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
K L+H FFA+R SK+P + G+ PR + ++ ++GGG MG+GIAT+ +L+ PV+L E+
Sbjct: 263 KGLIHAFFAERAVSKLPELQ--GVVPRDLHQIGVIGGGTMGAGIATSALLAGLPVVLLEM 320
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTI-SLLTGVLDYESFKDVDMVIEAIIEN 237
+ +A R+ +NL VK+GK++Q + + + L LDY++ ++VD+VIEA+ E+
Sbjct: 321 TPEAAKAAQARIASNLAGAVKRGKLSQSDHDDILQNRLELALDYDALQNVDLVIEAVFED 380
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+FA L+ C +LA+NTS +D+N I T D ++G HFFSPAHVM LLE+
Sbjct: 381 MEVKKQVFAQLDAVCKGGAVLATNTSYLDINEIAALTRRPDDVIGLHFFSPAHVMKLLEV 440
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V ++T+P+V+ +GK++ KT + G C GF NR+ Y A +V G Y I
Sbjct: 441 VVADRTAPEVVATGFALGKRLGKTAVRAGVCDGFIGNRILSAYRTCADHMVLDGASPYQI 500
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
D A+T FG MGPF ++DL G + A + R S + E G+ T
Sbjct: 501 DAALTAFGFAMGPFAVSDLAGLDIGWAARKRKRAAGLDPRARDSFYADKLCEGGYFGQKT 560
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KG+Y+Y+ RR P+PEV IE R+ G++ ++ +IV +VNEA
Sbjct: 561 GKGYYVYETGRRGGVPNPEVMPLIEAERAAQGISA----RGFTDDEIVRRYMVAMVNEAA 616
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
RV EGIA + D+D+ + G GFP Y
Sbjct: 617 RVIGEGIARRPLDVDVTLIYGYGFPRY 643
>gi|346991676|ref|ZP_08859748.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Ruegeria sp. TW15]
Length = 697
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/514 (35%), Positives = 275/514 (53%), Gaps = 33/514 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA--PNQLVSTARQWALDILEH---RRPWVATLYKTDK 55
M+ T + V+ EA +G++D V P ++ + D+LE RRP V + K
Sbjct: 151 MITTGRHVQASEALQMGVLDKVQDGDPREI---GLAFVRDLLETGAPRRP-VCEMAKPTP 206
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGP-RAGLQKEAEDFQKLLR 114
I+ + K R Q P + + V+A + AG +E E F +L+
Sbjct: 207 IDFDATYDAVLKKGRGQ--------LSPAIAVRAVQASCEAHDFAAGQARERELFTELMA 258
Query: 115 SETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
S+ K L+H FFA+R SK+P + G+ PR + ++ ++GGG MG+GIAT+ +L+ V+
Sbjct: 259 SDQRKGLIHAFFAERAVSKLPELQ--GINPRELHQIGVVGGGTMGAGIATSALLAGLTVV 316
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMT----QEKFEKTISLLTGVLDYESFKDVDMV 230
L E++ +A R+ ANL VK+GK++ +E E I+L T DY+ VD+V
Sbjct: 317 LLEMSVDAAKAAKDRIAANLAGAVKRGKLSPDAQEEILENRITLST---DYDGLSGVDLV 373
Query: 231 IEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAH 290
IEA+ E++ +K+Q+FA L+ C +LA+NTS +DLN I T ++G HFFSPAH
Sbjct: 374 IEAVFEDMEIKKQVFAKLDATCKSGAVLATNTSYLDLNEIAASTGRPSDVIGLHFFSPAH 433
Query: 291 VMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVER 350
VM LLEIV + T+P+VI +GK++ K + G C GF NR+ Y A +V
Sbjct: 434 VMKLLEIVVADHTAPEVIATGFALGKRLGKVSVRAGVCDGFIGNRILNAYRTCADHMVLD 493
Query: 351 GTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTYKSMIIPIMQED 409
G + ID A+T+FG MGPF ++DL G + A + R +S + E
Sbjct: 494 GASPFQIDAALTRFGFAMGPFAVSDLAGLDIGWAARKRKRATGLDPRARESFYADKLCEA 553
Query: 410 KRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFF 468
G+ T KG+Y+Y+ R P+PE+ IE R+ G I P+ + ++++IV
Sbjct: 554 GHFGQKTGKGYYVYEPGNRSRKPNPEIMPLIEAERAAKG--ISPR--EFTDEEIVRRYMI 609
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
+VNEA +V EGIA + D+DI + G GFP Y
Sbjct: 610 AMVNEAAKVVGEGIARRPLDVDITLLYGYGFPRY 643
>gi|148553249|ref|YP_001260831.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas wittichii RW1]
gi|148498439|gb|ABQ66693.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Sphingomonas wittichii RW1]
Length = 748
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 272/502 (54%), Gaps = 18/502 (3%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVV--APNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
+L+ KPV +A +LG++DAV AP+ + + +A +++ + P VA + D+I
Sbjct: 201 VLSGKPVGAAQALALGILDAVEDGAPDAIGAA---FARRVIDEKLPAVAVSRRDDRIAAT 257
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
F A+ ++ P + V + +AE + L+ +
Sbjct: 258 RADPSAFDALAAKLTARSKGQEAPAANVAAVRRSFTLPFDEAMAIDAEANRALMAGSQSR 317
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+L H+FFA+R +++PG+ A R V AI+G G MG GIA + PV++ +
Sbjct: 318 ALRHLFFAEREAARIPGLPKDARA-RDVASAAIIGAGTMGGGIAMCFAGAGIPVVIVDTT 376
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+ RVRAN + VK+G ++QE+ +K ++L+T D + D D+VIEA+ E+++
Sbjct: 377 QEALDRGMERVRANYATSVKRGSISQEQVDKRLALITPATDRAAVADADLVIEAVFEDMA 436
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K++IF+DLEK P +LASNTS +D++ I + VG HFFSPA+VM LLE+V+
Sbjct: 437 VKKEIFSDLEKRVKPGTVLASNTSALDVDEIAAALDRPEDFVGMHFFSPANVMKLLEVVQ 496
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
++SP+ I+ + +G+KI K P+ GNC GF NRM + A L++RG +D
Sbjct: 497 AAKSSPEAILTAMAVGRKIGKVPVWSGNCDGFIGNRMVAKRSAQAERLLQRGAFPPQVDA 556
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
A+TK G PMGP D+ G + A + FP I + E + G+ T G
Sbjct: 557 ALTKLGFPMGPLTTNDMSGLDIGYAIRKRRGTPFP-------IADAIVESGQLGQKTGSG 609
Query: 420 FYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y Y+ R P+P+ I + G+ + ++SE ++VE + FP++NE R+
Sbjct: 610 YYRYEPGDRTPRPNPDTDALIVATSAKLGI----ERREMSEGEMVERLLFPLINEGARIV 665
Query: 479 AEGIAVKAADLDIASVMGMGFP 500
GIA++ +D+D+ + G G+P
Sbjct: 666 EAGIALRPSDVDLVWINGYGWP 687
>gi|294146813|ref|YP_003559479.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
gi|292677230|dbj|BAI98747.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
Length = 687
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 176/500 (35%), Positives = 259/500 (51%), Gaps = 28/500 (5%)
Query: 7 PVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREIF 66
PV A +G+VD V LV +A ++ ++ P D+I + E+F
Sbjct: 158 PVSASAAREMGIVDEVADEGALVGSALEYVRKLIAGGAPLRRVRDLEDRIAADRQQPELF 217
Query: 67 -KFARAQAR----KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSL 121
+F R+ AR K AP + +EA V GL +E E F +L + K+
Sbjct: 218 DEFRRSNARAFRGKDAPE-----SIVKAIEAAVALPFEEGLAREFELFVELEKGLQAKAQ 272
Query: 122 VHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+H FFA+R SKV V D + P V+ V ++G G MG GIA + PV + E +
Sbjct: 273 IHAFFAERTASKVKDVPGDTPVLP--VRTVGVVGAGTMGGGIAMNFLNVGIPVHIVETAQ 330
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ GI +R N + +K+GK+T E E+ +SLL LD +D D++IEA+ E++ L
Sbjct: 331 ANLDRGIATIRKNYEISLKRGKLTAEALERRMSLLHATLDLGDLRDCDLIIEAVFESMPL 390
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ+IFA L+ ILASNTS +DLN I T D ++G HFFSPA+VMPLLE+VR
Sbjct: 391 KQEIFAKLDAVARDGAILASNTSFLDLNQIARATSRPDHVIGLHFFSPANVMPLLEVVRG 450
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ T+ V+ + + +KI K P++ G C GF NR T+ A LL+ + ID A
Sbjct: 451 DATAKPVVATAMKLARKIGKVPVLSGVCDGFIANRAMRARTEQADLLLLQNLSPDAIDAA 510
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I +G MGPFR+ DLVG V + ER+ ++ R G+ + G+
Sbjct: 511 IYDYGFAMGPFRMLDLVGLDV-------IGRDSTERSVAKDLVAA----GRMGQKSGGGY 559
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y YDE R A P I + G+A S+++IV + PVVNE ++ E
Sbjct: 560 YDYDEARAARPSEAALDIIRAHAAWKGIAQR----SFSQEEIVARLLHPVVNEGAKILEE 615
Query: 481 GIAVKAADLDIASVMGMGFP 500
GIA++A+D+D+A + G +P
Sbjct: 616 GIAMRASDIDVAMIKGYNWP 635
>gi|421747817|ref|ZP_16185486.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator
HPC(L)]
gi|409773513|gb|EKN55297.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator
HPC(L)]
Length = 693
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 269/505 (53%), Gaps = 18/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + V A +GLVD + L + A +A ++ RP DKI
Sbjct: 155 MVTSGTHVPAPAAAEMGLVDLLTDDASLRADAIAFARQVVGEGRPLRKVRDLDDKIAAAR 214
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EIF R ++ P I +EA V GL++E F +LL +
Sbjct: 215 GKPEIFAEFRRANARRFRGFDAPEYNIRCIEAAVELPFDEGLKRERAMFVELLNGTQSAA 274
Query: 121 LVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ FFA R ++P + D L P V++V I+G G MG GIA + + YPV + E +
Sbjct: 275 QRYYFFASRQVWQLPDIDADTPLLP--VRQVGIIGAGTMGGGIAMNFLNAGYPVTIVETS 332
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+ +R N ++ KKG++T E ++LLT L+ E D D+VIEA+ EN+
Sbjct: 333 QQALDRGVRTIRTNYENTAKKGRITATDIEHRMALLTPTLEMEKLADADLVIEAVFENMD 392
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+ +F L++ P ILA+NTS +D++ I T + ++G HFFSPA+VM LLE+VR
Sbjct: 393 VKKDVFGRLDRIAKPGAILATNTSALDVDEIAAATSRPESVIGLHFFSPANVMKLLEVVR 452
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+T+ VI +++ +KI K +VG C GF NRM + A LV G + +DR
Sbjct: 453 GARTAKPVIRTSMELARKIGKIAALVGVCPGFVGNRMLAQRQREAQKLVLEGALPWDVDR 512
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
A+ +FG PMGPF ++DL G + E++ S + I+ E +R G+ T G
Sbjct: 513 ALYEFGFPMGPFAMSDLAGLDLGWVR---------EKSSSSTLREILCEMERRGQKTGAG 563
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAK-LSEKDIVEMIFFPVVNEACRVF 478
+Y YDE+R A P P V++ I + G + ++ +SE++I+E +P++NE ++
Sbjct: 564 YYDYDEKRNAKPSPVVEQVIRDFAAKQG-----RTSRVVSEQEILERCIYPMINEGAKIL 618
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EG A++A+D+D+ V G G+P YR
Sbjct: 619 EEGKAIRASDIDVIWVNGYGWPVYR 643
>gi|88810261|ref|ZP_01125518.1| fatty oxidation complex, alpha subunit [Nitrococcus mobilis Nb-231]
gi|88791891|gb|EAR23001.1| fatty oxidation complex, alpha subunit [Nitrococcus mobilis Nb-231]
Length = 726
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 265/510 (51%), Gaps = 19/510 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA----LDILEHRRPWVATLYKTD-K 55
+MLT K ++ +A LGLVD V + L+ TA QW + W+ L +
Sbjct: 178 LMLTGKRLRATQAQRLGLVDDRVPTSILLDTALQWVEVCQRGRVRRGGGWLQALTAWALR 237
Query: 56 IEPLGEAREIFKFARAQ--ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
PLG A +FK AR Q AR Q N P I+ VE G+ G GL+ EA+ F +L
Sbjct: 238 GNPLGRAM-VFKQARKQVAARTQG-NYPAPTRLIECVERGLSEGIEPGLKAEAQAFGELA 295
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYP 172
+ + L++++FA K GV D + PR V++V +LG GLMG+GI+ + P
Sbjct: 296 MTPQARQLINLYFATSAMKKDTGVADPDVEPRAVRRVGVLGAGLMGAGISFVTAARAKVP 355
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
V LK+V K L +G+ + + R+ + +++ + E+ +T LD+ + +D+VIE
Sbjct: 356 VRLKDVEPKGLASGLKYIDERIDQRLSRHAISRFEAERARCRVTPTLDFSGCRSLDLVIE 415
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A+ E++ LK ++ ++E C I ASNTS++ L I + ++G H+FSP M
Sbjct: 416 AVFEDLELKHRMIREVEANCNADVIFASNTSSLPLARIAQAAERPQNVIGLHYFSPVDRM 475
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PLLE++ +T+P+VI + G+ KTPIVV + GF VNR+ PY A L+E G
Sbjct: 476 PLLEVIAHERTAPEVIATAMAFGRAQGKTPIVVRDGVGFYVNRILAPYLNEAVHLLEEGV 535
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRA 412
+ ID+A+ +FG P+GPF+L D VG + E F ER + M E R
Sbjct: 536 AIDRIDQALVRFGFPVGPFKLLDEVGIDIIAKVAPVLHEAFGERMRPVSAVERMLEADRL 595
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ +GFY Y +R E S+ G+ ++++ IVE ++N
Sbjct: 596 GKKNGRGFYRYGGKRSGK---------EVDESVYGLLAVSTRQEMADTAIVERTLILLLN 646
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPY 502
EA R EGI +A D D+ +V G+GFPP+
Sbjct: 647 EAARCLDEGIIREARDGDVGAVFGIGFPPF 676
>gi|397733304|ref|ZP_10500023.1| enoyl-CoA hydratase/isomerase family protein [Rhodococcus sp. JVH1]
gi|396930876|gb|EJI98066.1| enoyl-CoA hydratase/isomerase family protein [Rhodococcus sp. JVH1]
Length = 701
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 255/504 (50%), Gaps = 12/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ PV G A LG+ DA + L + ALD L + + D + P
Sbjct: 162 MIQQGTPVSGARAAELGIADACFDGDPLGA-----ALDFLRTQVDTSTSGPVVDSLPPAD 216
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
F AR R N + ID VE AGL E F LLR +
Sbjct: 217 ATGIDFDAARRPVRPSTRNGLAQLTAIDAVETATRLPTAAGLAFERAAFLGLLRGPESAA 276
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+FFA++ K+ GV + P + +VA++G G MGSGIA A PV L E N+
Sbjct: 277 LRHVFFAEKTAPKLSGVPPVSARP--ISRVAVVGAGTMGSGIAMAFANGGLPVTLIEQNQ 334
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G VR +S KGK+T+ + I+L+ LD ++ + D+V+EA+ E++++
Sbjct: 335 DALTRGTALVRKTYESSTTKGKLTETQARDRIALIEPNLDLDAAAEADLVVEAVFEDMAV 394
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L+ C P ILASNTS +DL+ I T ++G HFFSPA++M L+E+VR
Sbjct: 395 KKEVFGKLDAVCKPGAILASNTSRLDLDEIARATSRPSDVIGLHFFSPANIMKLVEVVRG 454
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
T+ V+ L + ++I K P++ C GF NRM PY + A L+E G ID A
Sbjct: 455 EATADDVVATGLTLAQQIGKIPVLSQVCEGFIGNRMLTPYRREAEFLLEEGATPQQIDAA 514
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FGM MGP ++DL G +A A + P+ + + E+ R G+ + G+
Sbjct: 515 LQAFGMAMGPCAMSDLAGLDIAWAARKRLAPTRPKDVRYPRVADTLCENGRFGQKSGAGY 574
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y++ R PDP V + I + G+ + +++++I++ +VNE +
Sbjct: 575 YRYEKGSRTPVPDPAVDEIIRTCAAEDGI----ERRTITDEEIIDRCVLALVNEGATLLG 630
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA +A+D+D+ V G GFP +R
Sbjct: 631 EGIAQRASDIDVVYVDGYGFPAFR 654
>gi|83312089|ref|YP_422353.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Magnetospirillum magneticum AMB-1]
gi|82946930|dbj|BAE51794.1| Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Magnetospirillum magneticum AMB-1]
Length = 703
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 271/507 (53%), Gaps = 15/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++L+ KP+ +A LGLVD + + + + + E + + +T + P
Sbjct: 152 LVLSGKPLPAPKAAELGLVDEIASGDLNAAALAFAKKLVAEGK-----GVRRTCDMAPKD 206
Query: 61 EAR--EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
A+ EI +AQ K N T P+ ++ + A GL+ EA+ ++L +
Sbjct: 207 AAKDAEIIAARQAQVAKTMKNRTSPLKALEAMAATTTLSFAEGLRLEADISKQLEHAVEA 266
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+++ H+FFA R K+PG+T + R ++KV I+G G MG GIA PV + +V
Sbjct: 267 RAMRHLFFADREVRKIPGITK-DIKARPIRKVGIIGAGTMGGGIAMCFANIGIPVTIIDV 325
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+++ L+ G+G +R N + V +G +TQE+ E + LL+ DY + KD D+ IEA+ E +
Sbjct: 326 SDENLQRGLGVIRKNYERSVSRGSLTQEQLESRMGLLSASTDYAALKDADLAIEAVFEKM 385
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
LK+ IFA L+ P IL +NTST+D++ I T ++G HFFSPA+VMPLLEIV
Sbjct: 386 ELKKDIFAKLDAVLPAGAILGTNTSTLDIDEIANTTKRPADVIGLHFFSPANVMPLLEIV 445
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
+ QT+ V++ LD+ K IKKT +V C GF NRM PY + A +V G ID
Sbjct: 446 QGKQTAMDVLLTALDMAKLIKKTGVVSKVCYGFIGNRMMDPYGREAERMVLEGATPAEID 505
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ +GM MG + D+ G V T + P+ ++ +K G+ +
Sbjct: 506 GALEGWGMAMGILAVYDMAGVEVGDNTRIANPHMVPDDPSFYRCSTLLVANKWLGQKVGR 565
Query: 419 GFYLYD--ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y YD +R++AS DPEV + + G ++ K + +I+E + ++NE +
Sbjct: 566 GYYRYDSPDRKRAS-DPEVIEMMHA----EGKRLNVPARKPGKDEILERCLYSMINEGAK 620
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA++A+D+D+ G GFP YR
Sbjct: 621 LLEEGIALRASDIDVVYTAGYGFPRYR 647
>gi|320332993|ref|YP_004169704.1| 3-hydroxybutyryl-CoA epimerase [Deinococcus maricopensis DSM 21211]
gi|319754282|gb|ADV66039.1| 3-hydroxybutyryl-CoA epimerase [Deinococcus maricopensis DSM 21211]
Length = 690
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 276/506 (54%), Gaps = 19/506 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIE--P 58
+M T V G +AH++GLVD V+ L++ A+ +A VA + ++ P
Sbjct: 151 LMTTGDSVSGAQAHAMGLVDEVIT-GDLLTGAQAFA--------ERVAAAWPLPRVSERP 201
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+ A F RA +++A L P + +D+VEA GL+ EA+ F + L++
Sbjct: 202 VNAATVDFAAVRAALQQRARGLASPFLIVDLVEASTRVPFEEGLRLEADAFMRALQTPQS 261
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+ L H FFA+R +K+ G+ G R V+ VA++G G MG GIA + PV L E
Sbjct: 262 RGLRHAFFAEREAAKINGLPK-GTPTRDVRSVAVIGAGTMGGGIAMNFANAGVPVTLVET 320
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ L+ G+ +R N + +KG++T ++ E+ + LL LD D D+VIEA+ EN+
Sbjct: 321 QREALDRGLAVIRRNYEQSARKGRLTPQQVEERMGLLRPTLDMADIADADLVIEAVFENM 380
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+ +FA L+ + P +LA+NTST+D++ + T R++G HFFSPA+VM LLE+V
Sbjct: 381 DVKKAVFAQLDAHAKPTAMLATNTSTLDVDALAAGTRDPSRVLGMHFFSPANVMKLLEVV 440
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +T+P V+ ++ + + I+K +VVG C GF NRM Y + A L+ G +D
Sbjct: 441 RGERTAPDVLATVMRVARTIRKVGVVVGVCDGFVGNRMINAYGREAHQLLVEGASPRDVD 500
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFI-ENFPERTYKSMIIPIMQEDKRAGETTR 417
A+ FG+PMGPF ++D+ G + A + E +R+ ++ + + R G+ T
Sbjct: 501 DAMHAFGLPMGPFEMSDMAGLDIGYAIRQRHAHEAGLDRS--DTVLDRLVDLGRKGQKTG 558
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G Y Y + R PD + + R+ GV P+ + ++I + + + +VNE R+
Sbjct: 559 AGVYRYADGRTPEPDAVTDDVLTQYRAEQGVT--PR--DVPREEITKRLVYQLVNEGARI 614
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EG+A +A+D+D+ + G GFP YR
Sbjct: 615 LEEGVAQRASDIDVIYLYGYGFPAYR 640
>gi|311108557|ref|YP_003981410.1| fatty acid oxidation complex subunit alpha [Achromobacter
xylosoxidans A8]
gi|310763246|gb|ADP18695.1| fatty acid oxidation complex subunit alpha 2 [Achromobacter
xylosoxidans A8]
Length = 702
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 176/509 (34%), Positives = 268/509 (52%), Gaps = 21/509 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL----VSTARQWALDILEHRRPWVATLYKTDKI 56
++L + V G+ A +LGL+D V L V AR D RR A K +
Sbjct: 156 LILEGRSVDGKAALTLGLLDQVCDEASLLDCAVRKARALCADHAAARRGAAAADDKQAGL 215
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
+ RE R A+ + H + +D ++A + + GL+ E E F + + S
Sbjct: 216 AAVAAQRE-----RLAAKPHSLPAQH--LLLDCLQAALELPLQEGLKVEREAFLQCVASP 268
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLA-PRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
K L H FFA+R K P G A PR V++ ++GGG MG+GIA A++ + V+L
Sbjct: 269 EHKGLAHAFFAERLAGKSPA----GAARPRPVQRAGVIGGGTMGAGIAVAMLDAGLDVVL 324
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E + L+AG R+ Q +V G++ E+ +S L+ DY + VD+V+EA+
Sbjct: 325 IERDAASLQAGQERIDGVYQRQVNSGRLDAATREQRLSRLSTATDYAALAAVDLVVEAVF 384
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E++ +K Q+FA L++ C P ILA+NTS +D+N I ++G HFFSPA++M LL
Sbjct: 385 EDMDVKTQVFAQLDRVCKPGAILATNTSYLDINQIARSISRPQDVIGLHFFSPANIMKLL 444
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EIV Q + V+ + +++ K P+ G C GF NR+ + Y +AA ++E G Y
Sbjct: 445 EIVVPEQVADDVVATGFALARRLGKVPVRAGVCDGFIGNRILYVYREAANHMMEDGASPY 504
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
ID+A+ +FG MGPFR ADL G + AT + P + + E G+
Sbjct: 505 QIDQALERFGYAMGPFRTADLTGGDIGWATRKRKAATRPPEARYVQVADRLCERGWFGQK 564
Query: 416 TRKGFYLYDER-RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T +G+YLY ER ++ PD EV I++ R+ G+ P S++DIV +VNEA
Sbjct: 565 TGRGYYLYPERGQRGKPDAEVLALIDQERAARGIEARP----FSDEDIVRRYMAALVNEA 620
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+V +GIA++ AD+D A V G GFP +R
Sbjct: 621 AKVLDDGIALRPADIDAALVNGYGFPRWR 649
>gi|121611857|ref|YP_999664.1| 3-hydroxyacyl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
gi|121556497|gb|ABM60646.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Verminephrobacter eiseniae EF01-2]
Length = 703
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 165/505 (32%), Positives = 269/505 (53%), Gaps = 18/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
+M + V+ +A +GL+D + + L A A ++ +RP + DK+E
Sbjct: 155 LMTSGAQVEAADALGIGLIDELAPEDDLQGAAVALAKRVVAEKRPLRKLRDQNDKVEAAR 214
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
G + F +A A+K P + VEA V GL+ E + F +L++ E
Sbjct: 215 GNPELVAAFRKANAKK-FRGFAAPEKIVQCVEAAVNLPFDEGLKLERKLFVELMQGEQSA 273
Query: 120 SLVHIFFAQRGTSKVPGVT-DLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+ H FFA R KVPG+ D + P V+ V ++G G MG+GIA + PV + E
Sbjct: 274 AQRHYFFASRQAWKVPGLKKDAAIVP--VQTVGVIGAGTMGAGIAMNFLNVGIPVHIVET 331
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
++ L+ G+ +R N + KKG++ E+ ++L+TG L+ + ++VIEA+ E++
Sbjct: 332 RQEALDRGLATIRTNYGNTAKKGRLEVGAIEERMALVTGSLELQDLSGCELVIEAVFEDM 391
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+ +F L++ ILASNTS +DLN I T + ++G HFFSPA+VM LLEIV
Sbjct: 392 EVKKHLFGRLDRVAKAGAILASNTSALDLNQIASATARPESVIGLHFFSPANVMKLLEIV 451
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +QTS VI + + +KI K ++VG C GF NR+ + A L+ G + +D
Sbjct: 452 RGDQTSDSVIATSMQLARKIGKVAVLVGVCPGFVGNRILGQRQREANQLIFEGATPWAVD 511
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
R + FG PMGPF ++DL G + +++ + + ++ E R G+ T
Sbjct: 512 RVLYDFGFPMGPFAMSDLAGLDLGWNK---------DKSTGATLREVLCEMGRRGQKTGA 562
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY YD +R A P V+ I G+A P+ ++S+ +I+E +P++NE ++
Sbjct: 563 GFYDYDGQRTAQPSQLVEGVIRDFARKKGIA--PR--QVSDDEILERCIYPMINEGAKIL 618
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EG+AV+A+D+D+ + G G+P YR
Sbjct: 619 QEGVAVRASDIDVVWINGYGWPVYR 643
>gi|407686989|ref|YP_006802162.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407290369|gb|AFT94681.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 713
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 191/508 (37%), Positives = 276/508 (54%), Gaps = 21/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKT--DKI-E 57
MMLT P + ++A G+VD VV + L+ A Q+AL R+P K+ DK+ E
Sbjct: 172 MMLTGSPARAKQAKKYGIVDEVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLE 227
Query: 58 PLGEAREI-FKFAR-AQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
G R + FK AR A K N P IDV+E G+ G +AGL+ EAE F KL+ +
Sbjct: 228 KTGPGRNMMFKKAREATFAKTKGNYPAPGYIIDVIETGMNEGMKAGLKAEAEAFGKLVMT 287
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
L IFFA K GV G+ P ++KKV +LGGGLMG GIA + PV
Sbjct: 288 PESFQLRQIFFATTEMKKENGVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVR 345
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+V + + + L +VKK M + +K ++LLTG LDY ++D D+V+EA+
Sbjct: 346 IKDVRAEGIANAMKYSYDILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDADIVVEAV 405
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++ LKQ++ AD+E+ C I ASNTS+I + I + + ++G H+FSP MPL
Sbjct: 406 FEDLDLKQKMVADIEENCKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPL 465
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
E++ ++TS QVI ++ KK KTP+VV + GF VNR+ PY A L+ G +
Sbjct: 466 AEVIAHDKTSDQVISSTVEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPI 525
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID+++ KFG P+GP +L D VG V +E F ER + D R G+
Sbjct: 526 EHIDKSLVKFGFPVGPVKLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGK 585
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
+KGFY Y+ ++ P EV + I + +S AKLSEK++ E ++NEA
Sbjct: 586 KNQKGFYSYESKK---PGKEVDESIYELLGLS------PSAKLSEKEVAERCVLMMLNEA 636
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPY 502
R EG+ A D DI ++ G+GFPP+
Sbjct: 637 ARCLDEGVIRNARDGDIGAIFGIGFPPF 664
>gi|226943850|ref|YP_002798923.1| 3-hydroxyacyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
gi|226718777|gb|ACO77948.1| 3-hydroxyacyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
Length = 697
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 235/404 (58%), Gaps = 7/404 (1%)
Query: 101 GLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGS 160
GL++E F L ++L H F A+R K+PG+ D V++V ++G G MG+
Sbjct: 244 GLEEEGRLFAGLHAGPQSRALCHAFLAERAAGKIPGIDD-STPTIPVERVGVVGAGTMGT 302
Query: 161 GIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLD 220
GIA + + + V L E E+ LE G+ VR + + K ++ Q + + + L+G LD
Sbjct: 303 GIAIVFLNAGFEVALLESGEQALERGLAVVREHFAGLLAKKRLDQAQCDALLGKLSGSLD 362
Query: 221 YESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRI 280
Y + DV + +EA+ E++ +K+Q+ L++ P ILASNTST+DLNL+ E T + +
Sbjct: 363 YAALGDVQLAVEAVFEDLEVKRQVLRRLDEALPDGAILASNTSTLDLNLLAEATSRPESV 422
Query: 281 VGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPY 340
VG HFFSPA VM LLE+VR +T+ V+ + +GK+++K + G C GF NRM Y
Sbjct: 423 VGLHFFSPAQVMRLLEVVRGRRTADSVMATAMRLGKRLQKVSVASGVCDGFIGNRMLNEY 482
Query: 341 TQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS 400
+ A LL++ G + IDRA+ +GM MGPFR+ D+ G + A + P + S
Sbjct: 483 LRVAGLLLDAGALPWQIDRALETWGMAMGPFRMCDMAGNDIGWAIRKRQRAADPGLRF-S 541
Query: 401 MIIPIMQEDKRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSE 459
++ E R G+ T KG+Y Y+ RR +PDPEV++ I+ R+ +G+ P+ + +
Sbjct: 542 ATADLLCEQGRFGQKTGKGWYRYEAGRRGGTPDPEVERLIDAYRTRAGLL--PR--TIGD 597
Query: 460 KDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++IVE + +VNE R+ EGIA++A+D+D+ + G GFP R
Sbjct: 598 REIVERCIYALVNEGARLLEEGIALRASDVDVVYLAGYGFPRLR 641
>gi|393718288|ref|ZP_10338215.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas echinoides ATCC
14820]
Length = 677
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 269/505 (53%), Gaps = 21/505 (4%)
Query: 1 MMLTSK--PVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEP 58
+ LT+K P+ + A S GL+D + + L + A +A ++ + + P K + +P
Sbjct: 150 LELTAKGDPIPAKLALSAGLIDRIAGEDTLAADAIAFAREVADAK-PLPRARDKVAQADP 208
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
EA FK A+ + I C++ G S G+ E ++F KL+
Sbjct: 209 --EAVAAFKKENAKRFRGFDAPAANIACVEKATDG--SSFDEGIAFERQEFMKLMFGVQS 264
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+ HIFFA+R +K+ G+ D +A R +K+V ++G G MG GI+ + + PV + E+
Sbjct: 265 AAQRHIFFAERQAAKIDGI-DPKIALREIKRVGVIGAGTMGGGISMNFLSAGIPVTIVEM 323
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
++ L+ G G +R N ++ KG++ E+ E + LT LD+ + D D++IEA+ EN+
Sbjct: 324 AQEALDRGTGVIRKNYEASAAKGRLKPEQVEAAMGALTPTLDFSALADCDLIIEAVYENM 383
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+ IF L+ P ILASNTS ++++ I T ++G HFFSPA+VM LLE+V
Sbjct: 384 DVKKDIFTKLDAIAKPGAILASNTSYLNIDEIASVTKRPGDVLGMHFFSPANVMKLLEVV 443
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R QT V+ ++ + K I+K +V G C GF NRM P A L+ G ID
Sbjct: 444 RGAQTEDDVLATVMALSKTIRKVAVVAGVCDGFIGNRMLKPRQVEAMKLLLEGATPEQID 503
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+ FGMPMG F+++DL G + IEN I + + R G+ T K
Sbjct: 504 KVHVAFGMPMGAFQMSDLAGVDIGWHRDPTRIEN---------IRDALAAEGRWGQKTGK 554
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY YDE+R +P P V + IE RS S + + ++S+++IVE + +VNE +
Sbjct: 555 GFYDYDEKRNPTPSPRVAEIIEDFRSKSNL----QKREISDEEIVEKTLYTMVNEGALIL 610
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
E +A +A+D+D+ + G G+P YR
Sbjct: 611 EEKMAQRASDIDVVWIYGYGWPVYR 635
>gi|103488544|ref|YP_618105.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingopyxis alaskensis RB2256]
gi|98978621|gb|ABF54772.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Sphingopyxis alaskensis RB2256]
Length = 677
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 173/505 (34%), Positives = 259/505 (51%), Gaps = 25/505 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWAL-DILEHRRPWVATLYKTDKIEPL 59
M T PV +A +GLVD + + L + A +A I + RP T +
Sbjct: 156 MTSTGDPVPAPKAKEMGLVDELAGEDSLAADAIAFARAKIADGPRP-------TRERPVF 208
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
G+ I + A A++ P + VEA GL E E F KL+
Sbjct: 209 GDVAVIERLKAANAKRWR-GFEAPYANLACVEAATRLPFDEGLAFEREQFMKLMFGSQSA 267
Query: 120 SLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+ HIFFA+R +K+ G+ D L R VKKV I+G G MG GI + P + E+
Sbjct: 268 AQRHIFFAERQAAKIDGLPKDTKL--RDVKKVGIIGAGTMGGGIMMNFLQKGIPCTIVEM 325
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ L+ G+G VR N + KG+ T E+ ++ + L+T L + D D++IEA+ EN+
Sbjct: 326 AQDALDRGLGVVRKNYDASAAKGRFTPEQVDQMMGLITPSLSLDDLADCDLIIEAVYENM 385
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+ IF L+ P ILASNTS +D++ I T ++G HFFSPA+VM LLE+V
Sbjct: 386 DVKKDIFGKLDTIAKPGAILASNTSYLDIDEIATATNRPGDVLGMHFFSPANVMKLLEVV 445
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +T+P + + GKKI K +V G C GF NRM P A L+ G +D
Sbjct: 446 RGEKTAPDALATAMATGKKIGKVAVVAGVCDGFIGNRMLKPRQMEAMKLLLEGATPAQVD 505
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+ FGMPMGPF+++DL G + IEN I + + R G+ +
Sbjct: 506 KVHVDFGMPMGPFQMSDLAGVDIGWHRDPNRIEN---------IRDALCAEGRWGQKKQA 556
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY YDE+R S P V + IE+ R +G+ + ++++++I+E +P+VNE R+
Sbjct: 557 GFYDYDEKRNPSESPRVAEIIEEFRKKAGI----EKREITDQEIIERTLYPMVNEGARIL 612
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EG A +A+D+D+ + G G+P YR
Sbjct: 613 EEGKAQRASDIDVVWIYGYGWPVYR 637
>gi|311106832|ref|YP_003979685.1| enoyl-CoA hydratase [Achromobacter xylosoxidans A8]
gi|310761521|gb|ADP16970.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Achromobacter xylosoxidans A8]
Length = 706
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 239/426 (56%), Gaps = 7/426 (1%)
Query: 79 NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVT 138
L P ++ V A + GL+ E F + L S LVH FFA+R T+K+PG
Sbjct: 234 GLYSPAKIVEAVRAAIEQPFEEGLRTERALFLQCLDSPQRAGLVHAFFAERDTAKMPGQE 293
Query: 139 DLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRV 198
PRR++++ I+GGG MG+GIA + + + +PV + E +E LE G GRV + V
Sbjct: 294 PA--RPRRLERIGIVGGGTMGAGIAVSALDAGFPVTMVEQDEAALERGRGRVAQVYELLV 351
Query: 199 KKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCIL 258
KKG++ ++ + ++ TG YE+ D D++IEA+ E++++KQ +FA L++ P +L
Sbjct: 352 KKGRIGADERDARMARYTGSTRYEALDDADLIIEAVFEDMAVKQTVFAQLDRVAKPGAVL 411
Query: 259 ASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKI 318
A+NTS +D+NLI T ++G HFFSPA++M LLE+V + T+P + ++ +++
Sbjct: 412 ATNTSYLDVNLIAAATRGPADVLGLHFFSPANIMKLLEVVVGDHTAPDTVATGFELARRL 471
Query: 319 KKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVG 378
+K P+ G C GF NR+ + QAA +++E G Y ID A+ FG PMGP+++ADL G
Sbjct: 472 RKIPVRAGVCDGFIGNRILAVHRQAADMMMEDGASPYEIDAAVRAFGYPMGPYQMADLAG 531
Query: 379 FGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKASPDPEVKK 437
+ AT + I + E G+ T +GFYLY D R+ DPEV
Sbjct: 532 GDIGWATRKRRAPTRDPALRYVQIPDRLCERGWFGQKTGRGFYLYPDGARQGEQDPEVLA 591
Query: 438 FIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGM 497
I+ R+ +GV +++DI ++NEA V +GIA + +D+D+ + G
Sbjct: 592 LIDAERARAGVTPH----AYTQEDIQRRYLAAMINEAANVLHQGIAQRPSDIDVVFLSGY 647
Query: 498 GFPPYR 503
GFP YR
Sbjct: 648 GFPRYR 653
>gi|254503279|ref|ZP_05115430.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Labrenzia alexandrii DFL-11]
gi|222439350|gb|EEE46029.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Labrenzia alexandrii DFL-11]
Length = 696
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 171/508 (33%), Positives = 271/508 (53%), Gaps = 20/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHR---RPWVATLYKTDKIE 57
M+ + KPV EA LGL+D + + + + +A +++ RP T +
Sbjct: 153 MITSGKPVSANEALELGLIDQISGEDDMRAAGLAYAKALVKQGAGPRPVSGLPCNTPE-- 210
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRA-GLQKEAEDFQKLLRSE 116
+F ARA K+A CID +E G V+ P A GL +E F+ L+ S+
Sbjct: 211 -----DGLFDKARATLAKKARGQLASQKCIDAIE-GAVNLPFAEGLAQERALFRALMDSD 264
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+L+H FF++R K+P + D+ PR ++ V I+GGG MGSGIAT+ +L+ V L
Sbjct: 265 QRAALIHAFFSERQVGKLPEIKDV--EPRILENVGIIGGGTMGSGIATSALLAGLTVTLI 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTIS-LLTGVLDYESFKDVDMVIEAII 235
E + + + G V NL VK+GK++QEKF+ ++ DY++ + D+VIEA+
Sbjct: 323 ERDAEAVAKAEGTVSKNLAGAVKRGKLSQEKFDAIMAGHFKAGSDYDALAEADLVIEAVF 382
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E++ +K+++F L+K C P +LASNTS +D++ I E T ++G HFFSPAHVM LL
Sbjct: 383 ESMDVKKEVFGKLDKICKPGAVLASNTSYLDVDEIAEITSRPADVIGLHFFSPAHVMRLL 442
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EIV +T+P V+ + K++ K + G C GF NR+ Y +A V G +
Sbjct: 443 EIVVGAKTAPDVVATGFALAKRLGKIGVRAGVCDGFIGNRILATYRKAIDGAVLAGASPF 502
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+DRA+ FG+ MGPF ++DL G + T + R + + ED G
Sbjct: 503 DVDRALVDFGLAMGPFAVSDLAGLDIGYMTRQRLAATRDPREVYAEFSDKLCEDGHHGRK 562
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
T +GFY Y + P+ ++ +I + R+ G+ + LS+++I++ +VNEA
Sbjct: 563 TGRGFYDYSGEQPV-PNDDILGYISEERAAKGI----ESRSLSDQEIIDRYMAAMVNEAA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
V EGIA + D+D+ + G GFP +R
Sbjct: 618 LVVEEGIAQRPLDVDVTLLNGYGFPRWR 645
>gi|414176191|ref|ZP_11430420.1| hypothetical protein HMPREF9695_04066 [Afipia broomeae ATCC 49717]
gi|410886344|gb|EKS34156.1| hypothetical protein HMPREF9695_04066 [Afipia broomeae ATCC 49717]
Length = 696
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 270/504 (53%), Gaps = 14/504 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ P+ +A GL+D VV V +A +L +RP K+
Sbjct: 152 MIVGGDPIGAADALKNGLIDEVVEGEPAVG-GEAFARKVLAEKRPLRKLRDDDSKLAAAK 210
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ IF A A A K+ L P+ + V + L+ E + F KL+ + K+
Sbjct: 211 ADKSIFTNAAAAANKRNRGLEAPLAAAEAVSHSLDQPFDQALKSERDLFIKLMNGDQSKA 270
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ FFA+R +KV GV + G PR VK+VAI+G G MG GIA + + PV L E
Sbjct: 271 QRYAFFAEREAAKVSGVPE-GTKPRDVKQVAIIGAGTMGGGIAMSFANAGIPVTLIETGG 329
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G ++ N ++ +G + + K + L+ GV+ E+ KD D++IEA+ E +++
Sbjct: 330 EQLKRGLGVMQKNYEATAARGGIPADAPAKRMGLIKGVVGIENVKDADLIIEAVFETMAI 389
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F L+++ P +LA+NTS +D+N I T ++G HFFSPA+VM L EIVR
Sbjct: 390 KKDVFGKLDQFAKPGAVLATNTSYLDINQIAAMTKRPQDVLGMHFFSPANVMKLCEIVRG 449
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P ++ + + K+I K P+VVG C GF NRM + A + G +D
Sbjct: 450 EKTAPDALMTAVAVAKRIAKVPVVVGVCDGFVGNRMLAARGKQAEKFLFEGALPQQVDAV 509
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+TKFGMPMGPF + DL G + + +R KS I + E R G+ T KG+
Sbjct: 510 LTKFGMPMGPFAMGDLAGLDIG-------WRSRQDRGIKSEIADAICEAGRFGQKTGKGY 562
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R PDPE++K IE+ + G+ K ++ +++I+E + +P++NE R+
Sbjct: 563 YKYEAGSRSPLPDPEIEKLIEETTAKLGL----KRRQIDDQEILERLMYPMINEGARILE 618
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA + +D+D+ + G G+P YR
Sbjct: 619 EKIAARPSDIDVVWLYGYGWPIYR 642
>gi|209519293|ref|ZP_03268093.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
gi|209500242|gb|EEA00298.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
Length = 700
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 171/508 (33%), Positives = 269/508 (52%), Gaps = 21/508 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQ--LVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
+ PV E+AH G++D +V LVS AR +A D+ TL + D+ G
Sbjct: 156 SGNPVSAEQAHEWGVIDYLVTDRDVDLVSAARAFAQDLNCK-----GTLAR-DRTAIKGP 209
Query: 62 AREI----FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+++ F+ R + +++ L P +DV+EA G E + FQ+ S
Sbjct: 210 LKDVDLSMFETYRQKNQRKWHGLVAPQKIVDVLEASCALTFDEGCALEKKAFQECEHSPE 269
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
SL H+FFA+R KV G P +K V ++G G MG GIA A + V+L +
Sbjct: 270 SASLRHLFFAEREAGKVRGADKA--TPLDIKSVTVIGAGTMGQGIAQACASAGLSVVLVD 327
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ LE I ++AN ++ V +G M + K ++ +L++ D + D++IEA+ E+
Sbjct: 328 RTYEALERAIVAIQANYETSVARGSMARAKADRAFNLISISCDLVAVSTCDLIIEAVFED 387
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +KQ +F DL+ P ILA+NTST+D++LI T ++VG HFFSPAHVM L+E+
Sbjct: 388 LGVKQSVFRDLDAVAKPEAILATNTSTLDIDLIANVTRRPQQVVGMHFFSPAHVMKLVEV 447
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
++ +QTS +V +L I K ++K + GN GF NR+ Y + A L+E G + I
Sbjct: 448 IKGSQTSDEVSATILKITKALRKIAVFAGNEEGFIGNRILGAYGREADYLLEEGATPWQI 507
Query: 358 DRAITKFGMPMGPFRLADLVGFGV--AIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
DR + +FG PMG F + D+ G V I G + P S++ + E R G+
Sbjct: 508 DRVLNQFGFPMGLFAMRDMAGLDVIWRIRQGQERKGTRPAYERYSVLADRICEQGRFGQK 567
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
T G+Y Y E R A+P PE++ I + + +G+ + ++S++ IV+ I +VNE
Sbjct: 568 TGSGYYKY-EGRTATPCPEIEALIVQVSADAGI----ERREISDEAIVQRIMCAMVNEGA 622
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ G A +A+D+DI G GFP YR
Sbjct: 623 RIIDSGTAQRASDIDIVYTNGYGFPSYR 650
>gi|406596127|ref|YP_006747257.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii ATCC 27126]
gi|406373448|gb|AFS36703.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii ATCC 27126]
Length = 713
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 191/508 (37%), Positives = 276/508 (54%), Gaps = 21/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKT--DKI-E 57
MMLT P + ++A G+VD VV + L+ A Q+AL R+P K+ DK+ E
Sbjct: 172 MMLTGSPARAKQAKKYGIVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLE 227
Query: 58 PLGEAREI-FKFAR-AQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
G R + FK AR A K N P IDV+E G+ G +AGL+ EAE F KL+ +
Sbjct: 228 KTGPGRNMMFKKAREATFAKTKGNYPAPGYIIDVIETGMNEGMKAGLKAEAEAFGKLVMT 287
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
L IFFA K GV G+ P ++KKV +LGGGLMG GIA + PV
Sbjct: 288 PESFQLRQIFFATTEMKKENGVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVR 345
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+V + + + L +VKK M + +K ++LLTG LDY ++D D+V+EA+
Sbjct: 346 IKDVRAEGIANAMKYSYDILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDADIVVEAV 405
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++ LKQ++ AD+E+ C I ASNTS+I + I + + ++G H+FSP MPL
Sbjct: 406 FEDLDLKQKMVADIEENCKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPL 465
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
E++ ++TS QVI ++ KK KTP+VV + GF VNR+ PY A L+ G +
Sbjct: 466 AEVIAHDKTSDQVISSTVEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPI 525
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID+++ KFG P+GP +L D VG V +E F ER + D R G+
Sbjct: 526 EHIDKSLVKFGFPVGPVKLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGK 585
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
+KGFY Y+ ++ P EV + I + +S AKLSEK++ E ++NEA
Sbjct: 586 KNQKGFYSYEGKK---PGKEVDESIYELLGLS------PSAKLSEKEVAERCVLMMLNEA 636
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPY 502
R EG+ A D DI ++ G+GFPP+
Sbjct: 637 ARCLDEGVIRNARDGDIGAIFGIGFPPF 664
>gi|372278580|ref|ZP_09514616.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Oceanicola sp. S124]
Length = 697
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 176/508 (34%), Positives = 268/508 (52%), Gaps = 24/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVV--APNQL-VSTARQWALDILEHRRPWVATLYKTDKIE 57
M L+ + V EEA + G +D VV AP + ++ A++ L RR T T +I+
Sbjct: 157 MSLSGRQVSVEEAQAAGAIDRVVEGAPRDVALAMAQEVVAGTLPTRR----TSEITIEID 212
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRA-GLQKEAEDFQKLLRSE 116
RA +K++P+L +P+ CID + A P A GL+ E + F + +
Sbjct: 213 -----HTALDGIRAATQKKSPHLVNPLKCIDAIAA--ADQPIAEGLKVERQCFLDCMETP 265
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
L+H FF +R S +P R ++ V ++GGG MGSGIATA +L+ PV L
Sbjct: 266 QRAGLIHAFFGERAVSSIPEAKG---ETRDIQSVGVIGGGTMGSGIATACLLAGLPVTLV 322
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
EV ++ L+ G+ + NL+ V +GKM+ K + ++ LT L ++ DVD+VIEA+ E
Sbjct: 323 EVAQEGLDRGVATITKNLEGAVSRGKMSAAKKDAALTSLTPALQLDALADVDLVIEAVFE 382
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++ +K++IF L+ C P +LASNTS +D+N I T ++G HFFSPAHVM LLE
Sbjct: 383 DMGVKREIFGKLDAICKPGAVLASNTSYLDVNEIASCTSRPGDVLGLHFFSPAHVMRLLE 442
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
IV+ QT+P V+ + K++KK ++ C GF NR+ Y + LV G
Sbjct: 443 IVQGEQTAPDVLATGFALAKRLKKVGVLAQVCDGFIGNRILAHYALCSGYLVLDGASPAQ 502
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D A+ FG MGP ++ DL G + T + P Y I + E+ G
Sbjct: 503 VDAALEGFGFAMGPHKVGDLAGLDIGWMTRKRKAATRDPAERYAGQIPDRICENGWFGRK 562
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KG+YLY E P+PEV I++ R+ G I PK ++ +IVE +++EA
Sbjct: 563 AGKGYYLY-EGGAPVPNPEVATIIDEVRAEQG--ITPK--TFTDDEIVERYMTAMISEAA 617
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
RV +G A + D+D+ + G GFP +R
Sbjct: 618 RVVEDGTAKRPLDVDMVFLFGYGFPRFR 645
>gi|197106678|ref|YP_002132055.1| fatty oxidation complex subunit alpha [Phenylobacterium zucineum
HLK1]
gi|196480098|gb|ACG79626.1| fatty oxidation complex, alpha subunit [Phenylobacterium zucineum
HLK1]
Length = 691
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 260/504 (51%), Gaps = 18/504 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + + +EA ++GLVD +V +L A +A ++ +P V K+E
Sbjct: 154 MVTSGRHAPAKEALAMGLVDELVEEGKLKDGAVAFARKLVAENKPLVKVRENNAKLEEAK 213
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGP-RAGLQKEAEDFQKLLRSETCK 119
EIF R + ++ P I +EA V S GL E + F +L+
Sbjct: 214 GKPEIFAEFRKKNARKFRGFLAPEYNIRCIEAAVNSNSFEEGLAVERKLFMELMTGPQSA 273
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ + FFA+R K+P V D R VKKV +LG G MG GIA + PV + E+
Sbjct: 274 AQRYYFFAERTAQKIPDVPD-DTPTRPVKKVGVLGAGTMGGGIAMNFLNVGIPVTIVELK 332
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L+ G+ +R N + + E+ E+ +SLLTG L + F D D++IEA+ E +
Sbjct: 333 QDALDRGLATIRKNYE---RSRGAVPEQTEQRMSLLTGSLSMDDFADCDLIIEAVFERMD 389
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+ +FA L+ P ILA+NTS ++++ I T ++G HFFSPA+VM LLE++R
Sbjct: 390 IKKDVFAKLDGIAKPGAILATNTSYLNIDEIASATKRPQDVIGLHFFSPANVMKLLEVIR 449
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+ T+ VI + + K+I K ++ G C GF NRM + A LV G + IDR
Sbjct: 450 ADHTAKDVIATSMKLAKQIGKVAVLAGVCPGFIGNRMLSQRQREANKLVLEGAMPWDIDR 509
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
+ FG PMGPF ++DL G + EN T + ++ E R G+ T G
Sbjct: 510 VLYDFGFPMGPFAMSDLAGLDIGWVK-----ENSKGETLRD----VLCEMDRRGQKTGAG 560
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
FY YDE R A P P +K I+ R+ G+ +S+++I+E +P++NE ++
Sbjct: 561 FYDYDENRTAKPSPVTEKIIQDFRAKKGI----NARTISDEEILERCIYPMINEGAKILE 616
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EG A++ +D+D+ V G G+P YR
Sbjct: 617 EGKAIRPSDIDVVWVNGYGWPVYR 640
>gi|62320284|dbj|BAD94583.1| AIM1 protein [Arabidopsis thaliana]
Length = 399
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/236 (56%), Positives = 177/236 (75%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L SK + EE H LGL+DA+V P ++ST+R+WALDI E R+P++ +L++TDKI L
Sbjct: 163 MILLSKSISSEEGHKLGLIDALVPPGDVLSTSRKWALDIAEERKPFLQSLHRTDKIGSLS 222
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR I K +R A+K APN+ CI+V+E G++ G +G+ KEAE F++L+ S+T K
Sbjct: 223 EARAILKNSRQLAKKIAPNMPQHHACIEVIEEGIIHGGYSGVLKEAEVFKQLVLSDTAKG 282
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FFAQR TSKVP VTD+GL PR +KKVA++GGGLMGSGIATAL+LSN V+LKE+N
Sbjct: 283 LVHVFFAQRATSKVPNVTDVGLKPRPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINS 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
+FL GI V AN++S V +GK+TQ+K K +SL GVLDY F DVDMVIE ++
Sbjct: 343 EFLMKGIKSVEANMKSLVSRGKLTQDKAGKALSLFKGVLDYTEFNDVDMVIEVCLQ 398
>gi|330818421|ref|YP_004362126.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
gi|327370814|gb|AEA62170.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Burkholderia
gladioli BSR3]
Length = 712
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 176/508 (34%), Positives = 276/508 (54%), Gaps = 15/508 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + V E A LGLVD V A + ++ +A ++L R P V +
Sbjct: 162 LMLSGRHVGAEAARELGLVDRVAASDDTLAEGLAYAQELLSKRAP-VRRTRDAQGLADRA 220
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ ARA+ K++ L P ++ VEA +V G+++E E F + L S
Sbjct: 221 AAQAAIDAARAEVAKRSRGLFSPQRIVEAVEAALVLPFDEGMKRERELFVECLDSPQRAG 280
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FFA+R +++PG + G PR + +V ++GGG MG+GIA A++ + PVIL E ++
Sbjct: 281 LIHAFFAEREAARLPGAS--GAEPREIARVGVIGGGTMGAGIAVAVLDAGLPVILVERDD 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G R+ + V KG+++ ++ ++ L G Y++ +VD+VIEA+ E++++
Sbjct: 339 TALAQGRARIAKVYDALVAKGRLSDAARDERMARLAGSTVYDALAEVDLVIEAVFEDLAV 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLI----GERTYSKDRIVGAHFFSPAHVMPLLE 296
KQ +F +L + P +LA+NTS +D++ I GER ++G HFFSPA++M LLE
Sbjct: 399 KQAVFEELAQVAKPGVVLATNTSYLDIDAIAASAGERAAD---VIGLHFFSPANLMKLLE 455
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
IV Q +P+V+ K+++K + G C GF NR+ Y AA L+E G Y
Sbjct: 456 IVLPAQVAPEVVATAFAFAKRLRKVAVRAGVCDGFIGNRLLAVYRAAADYLMEDGASPYQ 515
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
IDRAI FG PMGP+++ DL G + AT + I + E G+ T
Sbjct: 516 IDRAIRGFGFPMGPYQVIDLAGGDIGWATRKRRAATRDPALRYVAIADRLCERGWFGQKT 575
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
++GFY Y E R PD EV+ I R+ G+A P+ + S++ IV ++NEA
Sbjct: 576 QRGFYRYPEGARVGEPDAEVEAIIAAERAAKGIA--PR--EFSDEAIVRRYLAAMINEAA 631
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
+V EGIA++ D+D+ V G GFP +R
Sbjct: 632 KVLEEGIALRPLDIDVVLVHGYGFPRHR 659
>gi|427404633|ref|ZP_18895373.1| hypothetical protein HMPREF9710_04969 [Massilia timonae CCUG 45783]
gi|425716804|gb|EKU79773.1| hypothetical protein HMPREF9710_04969 [Massilia timonae CCUG 45783]
Length = 696
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/508 (35%), Positives = 269/508 (52%), Gaps = 17/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVV-APNQLVSTARQWALDILEHR-RPWVATLYKTDKIEP 58
M+L P+ E+ L D V A +L+ A +A I + R P V D++
Sbjct: 152 MILGGIPMLSEKLAGTPLFDEVFQAGAELLPAAIAYAERIADLRPLPKV-----RDRVVE 206
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGP-RAGLQKEAEDFQKLLRSET 117
+A ARAQ A P C++ V A V + GL+ E E F +L +
Sbjct: 207 HPDAAGFLASARAQVDAAAGPFPAPRACVEAVAASVTADSFEDGLRFERERFIQLTTTSE 266
Query: 118 CKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
K+L H FFA+R KVP V D L R + A++G G MG GIA + PV L
Sbjct: 267 SKALRHAFFAERAAGKVPDVPADTPL--RSIASAAVVGAGTMGRGIAMNFANAGIPVTLL 324
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E + L+ G+ +R +S V KGK+ E+ E+ ++L+TG L Y++ D+V+EA+ E
Sbjct: 325 ETKQDALDQGLAAMRKLYESGVSKGKLKPEQLEQRMALVTGTLSYDAIAQADIVVEAVFE 384
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++ +K+ +F +L+K P ILA+NTST+D+N I T ++G HFFSPAHVM LLE
Sbjct: 385 DIGVKELVFRELDKVMKPGAILATNTSTLDVNRIAAFTRRPQDVIGLHFFSPAHVMKLLE 444
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
IVR +T V+ L + KK++K +V G C GF NRM Y + A L+E G
Sbjct: 445 IVRGARTGKDVLATALALSKKLRKIGVVSGVCDGFIGNRMLEQYLRQAVFLLEEGALPEQ 504
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+DRAI FG MGPFR++DL G + + P TY S + ++ E R G+ T
Sbjct: 505 VDRAIEAFGFAMGPFRMSDLAGNDIGWHIRKRRALESPGFTY-SKLPDLLCEQGRFGQKT 563
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y RKA P V + + + GV+ +++++IVE + + +VNE
Sbjct: 564 GAGWYDYRAGERKALPSEAVNDMVVRHSADIGVSRR----AIADEEIVERLVYALVNEGA 619
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ EGIA++A+D+D+ + G GFP +R
Sbjct: 620 RIIEEGIALRASDVDMVYLSGYGFPLHR 647
>gi|118590370|ref|ZP_01547772.1| Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase,
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein
[Stappia aggregata IAM 12614]
gi|118436833|gb|EAV43472.1| Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase,
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein
[Stappia aggregata IAM 12614]
Length = 704
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 268/504 (53%), Gaps = 16/504 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + KP+ +EA S GL+D +V + A A D+L P T T + +P
Sbjct: 163 MITSGKPMAADEALSHGLIDRIVEGDPR-DIALSSAKDLLAGDLPNRKTGELTAEPDPAA 221
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
K R + K P L P C+D VEA + R G+++E +++ + S
Sbjct: 222 -----IKAMRTKLAKSQPLLFSPHKCVDAVEACHLP-IREGMKEERRLYEECMASPQRAG 275
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FF++R +K+P T R + V ++GGG MGSGIATA++L PV L E ++
Sbjct: 276 LIHAFFSERAVTKIPEAT---ATAREINSVGVIGGGTMGSGIATAILLVGLPVTLTERDQ 332
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISL-LTGVLDYESFKDVDMVIEAIIENVS 239
L+ G+ + NL+ VK+GK++ E + ++ LT D + + D+VIEA+ E++
Sbjct: 333 DGLDRGVATITRNLEGAVKRGKLSAEARDDILAAKLTTSTDLAALAEADLVIEAVFEDMG 392
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K++IF L+K C P +LASNTS +D+N I T ++G HFFSPAHVM LLE+V
Sbjct: 393 VKREIFQTLDKVCKPGTVLASNTSYLDINEIAATTSRPQDVIGLHFFSPAHVMRLLEVVV 452
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
++T V+ + +K+KK + G C GF NR+ Y + A ++ G ID
Sbjct: 453 ADKTGADVVATGFALARKLKKIAVRSGVCDGFIGNRIMTFYKKTADYMMMDGASPEEIDT 512
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
A+ FG MGP+++ADL G ++ A + P I + E+ G T +G
Sbjct: 513 AMRGFGFAMGPYQVADLAGLDISWAANKRRAATRPAEERYIPIADRLCENGWFGRKTGQG 572
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
FY+YD+ + + P+PE I+ R +GV P+ +E++IV +++E RV
Sbjct: 573 FYIYDD-QGSRPNPEALAIIDAEREKAGVT--PR--SFTEEEIVSRFMTAMISEVVRVLE 627
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D + G GFP +R
Sbjct: 628 EGIALRPIDIDAVFLNGYGFPRFR 651
>gi|147810337|emb|CAN65032.1| hypothetical protein VITISV_018082 [Vitis vinifera]
Length = 516
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/225 (66%), Positives = 170/225 (75%), Gaps = 15/225 (6%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
+S KG +AHSLGLVD VVAP+QLV TA Q LDILE RR WV LYKT K+E LG+AR
Sbjct: 162 SSGYCKGVDAHSLGLVDVVVAPDQLVKTAPQ--LDILECRRLWVYNLYKTGKLEALGKAR 219
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
E+ KFAR QA+KQA NLTHP+VCIDV+EAG+VSGP AGL KEAE FQ+LLRS CKSLV
Sbjct: 220 EMLKFARTQAQKQALNLTHPLVCIDVIEAGIVSGPVAGLWKEAEAFQELLRSGICKSLVL 279
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
G+TDLGL PRR+ KVAIL GGLMGSGIATALILSNYPVILK+VNEKFL
Sbjct: 280 ------------GITDLGLVPRRINKVAIL-GGLMGSGIATALILSNYPVILKKVNEKFL 326
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVD 228
+AGIGRVRANLQSRVKK MT E + S+ ++ E+ K +
Sbjct: 327 QAGIGRVRANLQSRVKKEAMTMETDATSASVSAKAIEMETSKQTN 371
>gi|407699429|ref|YP_006824216.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Black Sea 11']
gi|407248576|gb|AFT77761.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Black Sea 11']
Length = 713
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 190/508 (37%), Positives = 275/508 (54%), Gaps = 21/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKT--DKI-E 57
MMLT P + ++A G+VD VV + L+ A Q+AL R+P K+ DK+ E
Sbjct: 172 MMLTGAPARAKQAKKYGIVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLE 227
Query: 58 PLGEAREI-FKFAR-AQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
G R + FK AR A K N P IDV+E G+ G +AGL+ EAE F KL+ +
Sbjct: 228 KTGPGRSMMFKKAREATFAKTKGNYPAPGYIIDVIETGMNDGMKAGLKAEAEAFGKLVMT 287
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
L IFFA K GV G+ P ++ KV +LGGGLMG GIA + PV
Sbjct: 288 PESFQLRQIFFATTEMKKENGVE--GVKPEKMNKVGVLGGGLMGGGIAYVTSTKAGVPVR 345
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+V + + + L +VKK M + +K ++LLTG LDY ++D D+V+EA+
Sbjct: 346 IKDVRAEGIANAMKYSYDILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDADIVVEAV 405
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++ LKQ++ AD+E+ C I ASNTS+I + I + + ++G H+FSP MPL
Sbjct: 406 FEDLDLKQKMVADIEENCKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPL 465
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
E++ ++TS QVI ++ KK KTP+VV + GF VNR+ PY A L+ G +
Sbjct: 466 AEVIAHDKTSDQVISSTVEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPI 525
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID+++ KFG P+GP +L D VG V +E F ER + D R G+
Sbjct: 526 EHIDKSLVKFGFPVGPVKLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGK 585
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
+KGFY Y+ ++ P EV + I + +S AKLSEK++ E ++NEA
Sbjct: 586 KNQKGFYSYEGKK---PGKEVDESIYELLGLS------PSAKLSEKEVAERCVLMMLNEA 636
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPY 502
R EG+ A D DI ++ G+GFPP+
Sbjct: 637 ARCLDEGVIRSARDGDIGAIFGIGFPPF 664
>gi|295699700|ref|YP_003607593.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
gi|295438913|gb|ADG18082.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
Length = 705
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 265/504 (52%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + V EAH+LGL+D + A +++ +A +L R P V +
Sbjct: 156 LMLSGRHVGANEAHALGLIDRIGASGDVLAEGLAYARSLLTTRAP-VRRACDARGLADRA 214
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+R + AR + ++ +L PI +D V+A + GL+ E + F + L S
Sbjct: 215 ASRAAIEAARVEVSTKSRHLFSPIKIVDAVQAALEMSFDDGLRHERQLFLQCLDSPQRAG 274
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R K P PR + V ++GGG MG+GIA AL+ + V + E ++
Sbjct: 275 LVHAFFAERAAQKAPETRKA--KPRAIASVGVIGGGTMGAGIAVALLDAGLSVTMIERDD 332
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G V ++ + KG+MT + ++ G Y++ VD+VIEA+ E++++
Sbjct: 333 ASLAYGRANVEKVYKALIAKGRMTSQAKAALLARFDGSTSYDALHAVDLVIEAVFEDMAV 392
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K +FA+L++ C P +LA+NTS +D++ I ++G HFFSPA++M LLE+V
Sbjct: 393 KHAVFAELDRVCKPGAVLATNTSYLDIDAIAASVSRPADVIGLHFFSPANLMKLLEVVVP 452
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
Q S V+ D+ KK++K P+ G C GF NR+ Y AA ++E G Y IDRA
Sbjct: 453 AQVSADVVATAFDLAKKLRKVPVRAGVCDGFIGNRVLAIYRAAADHMMEDGASPYQIDRA 512
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ +FG PMGPF+++DL G + AT + + I + E G+ T +G+
Sbjct: 513 VREFGFPMGPFQVSDLAGGDIGWATRKRRAATRDAKLRYVQIADRICERGWFGQKTGRGY 572
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R PDP+V+ I+ R + I P+ ++ +I+ ++NE V
Sbjct: 573 YLYADGARIGQPDPDVEAIIDAERERAN--ITPR--TFTDHEIMRRYMAAMINEGANVVH 628
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D+ + G GFP +R
Sbjct: 629 EGIALRPLDVDVTFLHGYGFPRHR 652
>gi|407683075|ref|YP_006798249.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'English Channel 673']
gi|407244686|gb|AFT73872.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'English Channel 673']
Length = 713
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 190/508 (37%), Positives = 276/508 (54%), Gaps = 21/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKT--DKI-E 57
MMLT P + ++A G+VD VV + L+ A Q+AL R+P K+ DK+ E
Sbjct: 172 MMLTGSPARAKQAKKYGIVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLE 227
Query: 58 PLGEAREI-FKFAR-AQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
G R + FK AR A K N P IDV+E G+ G +AGL+ EAE F KL+ +
Sbjct: 228 KTGPGRNMMFKKAREATFAKTKGNYPAPGYIIDVIETGMNEGMKAGLKAEAEAFGKLVMT 287
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
L IFFA K GV G+ P ++KKV +LGGGLMG GIA + PV
Sbjct: 288 PESFQLRQIFFATTEMKKENGVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVR 345
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+V + + + L +VKK M + +K ++LLTG LDY +++ D+V+EA+
Sbjct: 346 IKDVRAEGIANAMKYSYDILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQNADIVVEAV 405
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++ LKQ++ AD+E+ C I ASNTS+I + I + + ++G H+FSP MPL
Sbjct: 406 FEDLDLKQKMVADIEENCKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPL 465
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
E++ ++TS QVI ++ KK KTP+VV + GF VNR+ PY A L+ G +
Sbjct: 466 AEVIAHDRTSDQVISSTVEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPI 525
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID+++ KFG P+GP +L D VG V +E F ER + D R G+
Sbjct: 526 EHIDKSLVKFGFPVGPVKLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGK 585
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
+KGFY Y+ ++ P EV + I + +S AKLSEK++ E ++NEA
Sbjct: 586 KNQKGFYSYEGKK---PGKEVDESIYELLGLS------PSAKLSEKEVAERCVLMMLNEA 636
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPY 502
R EG+ A D DI ++ G+GFPP+
Sbjct: 637 ARCLDEGVIRSARDGDIGAIFGIGFPPF 664
>gi|94984861|ref|YP_604225.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus geothermalis DSM
11300]
gi|94555142|gb|ABF45056.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus geothermalis DSM
11300]
Length = 695
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 180/510 (35%), Positives = 272/510 (53%), Gaps = 26/510 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
MML+ P+ EA +LGLVDA+V + V+ AR A D RP +
Sbjct: 152 MMLSGNPIGATEAKALGLVDALVEGDLREGAVAFARVHADD-----RPLPRISER----- 201
Query: 58 PLGEAR-EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P+ +A E+F AR +K P + ID+ E G EA F + S
Sbjct: 202 PVKDASPELFAAAREGIKKTHRGQLAPSLIIDLAEMAATRPFAEGWDAEARLFMQAKDSP 261
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+ L HIFFA+R K+PG+T + +V I+G G MG GIA + PV +
Sbjct: 262 QSRGLRHIFFAEREAGKIPGLTK-DTPTTEITRVGIVGAGTMGGGIAMNFLNVGIPVTIV 320
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E +++ L+ G+ +R N ++ KG++T E+ E+ +SLLT LD + D D++IEA+ E
Sbjct: 321 ETSQEALDRGLATIRRNYENTAHKGRLTMEQVEQRLSLLTPTLDLTALSDADLIIEAVFE 380
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++ +K+ IF L+ P ILA+NTST+D+N I T ++++G HFFSPA+VM LLE
Sbjct: 381 DMDVKKDIFRRLDSIAKPGAILATNTSTLDVNEIASVTSRPEQVIGLHFFSPANVMRLLE 440
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
IVR ++TS V+ L++ K+I K +VVG C GF NRM Y A LVE G
Sbjct: 441 IVRADKTSDSVLATCLNLAKRIGKVGVVVGVCDGFVGNRMIHRYGDEARKLVEEGARPQD 500
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVA--IATGMQFIENFPE-RTYKSMIIPIMQEDKRAG 413
D A+ G+PMGPF ++D+ G V I + P+ + I+ E R G
Sbjct: 501 ADAAMHALGLPMGPFEMSDMAGLDVGYLIRQHQAKVRGLPKPDGWLDRIV----ERGRKG 556
Query: 414 ETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
+ T+ G Y Y + R+ P E+ + I R+ G I P+ ++S++++ E + + +VNE
Sbjct: 557 QKTQAGIYDYPDGRRPVPSAEIDQLIRDYRAEKG--IQPR--EISQEELTERLVYSLVNE 612
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ EGIA +A D+D+ + G GFP YR
Sbjct: 613 GAKILEEGIAQRAGDIDVIYIYGYGFPAYR 642
>gi|296533743|ref|ZP_06896290.1| Dodecenoyl-CoA isomerase [Roseomonas cervicalis ATCC 49957]
gi|296265919|gb|EFH11997.1| Dodecenoyl-CoA isomerase [Roseomonas cervicalis ATCC 49957]
Length = 698
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 266/514 (51%), Gaps = 24/514 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + PV E+A +LGL DA+V + L + + P + T +TD+++ G
Sbjct: 152 MIASGDPVPAEKAVALGLADALVEGDLLAAAKAKVKALAAAPLPPRLNT--RTDRLDAPG 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
ARE F+ A K+A I V GL KE + F L K+
Sbjct: 210 -AREEFEQAATALAKRAREEPQVAAIIQSVRNAFELPLEQGLAKERDFFVALRDDPRSKA 268
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+FFA+R +++PG+ + PR V + A+LGGG MG+GIA + + PV L E +
Sbjct: 269 LRHVFFAEREAARIPGLPRE-VKPRAVNRAAVLGGGTMGTGIAMSFANAGIPVRLIETDA 327
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE + RV VK+G + +E K ++L+ G + E+ D+V+EA+ E + L
Sbjct: 328 AALERALKRVADTYAVSVKRGSLAEEARAKRLALIEGAVGLENAAGTDLVVEAVFEELEL 387
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K++IFA L + P +LASNTS +D+N +G + ++G HFFSPA+VM LLE+VR
Sbjct: 388 KKEIFAKLGQITAPGTVLASNTSYLDINAMGAASGRPGDVLGMHFFSPANVMKLLEVVRA 447
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
T+P + +++G+K+ K P+VVG C GF NRM T+ L++ G +D+A
Sbjct: 448 EATAPDALATAMEVGRKLAKVPVVVGVCHGFVGNRMLAQRTRQVEALLQEGATPAQLDKA 507
Query: 361 ITKFGMPMGPFRLADLVGFGVAI----ATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+T FG MGP ++DL G + ATG K+ + + E R G+ T
Sbjct: 508 LTDFGFRMGPCAMSDLAGLDIGWRIRKATGA-----------KAPVADALCEAGRLGQKT 556
Query: 417 RKGFYLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KG+Y Y E +A DPE + IE + G+ + + +I+E + FP++NE
Sbjct: 557 GKGYYAYPEGARAGVEDPEAQAIIEGISAQLGI----TRRAIGQDEILERLVFPMINEGA 612
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIH 509
R+ EGIA + D+DI + G +P +R H
Sbjct: 613 RILEEGIAARPGDIDIVWLYGYNWPAWRGGPMHH 646
>gi|226362027|ref|YP_002779805.1| fatty oxidation complex alpha subunit [Rhodococcus opacus B4]
gi|226240512|dbj|BAH50860.1| fatty oxidation complex alpha subunit [Rhodococcus opacus B4]
Length = 687
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 251/461 (54%), Gaps = 8/461 (1%)
Query: 70 RAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQR 129
RAQ K++ P+V +D+VE GL E F +L+ + +L H FFA+R
Sbjct: 216 RAQLTKRSRGFEAPLVALDLVERARSVPFAEGLDAERAAFLELVGGDQSAALRHAFFAER 275
Query: 130 GTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGR 189
K+PG+ D R V++VA++G G MG GIA + + PVI+ E +++ L G+
Sbjct: 276 TARKIPGL-DPDTTVRPVREVAVVGAGTMGGGIAMNFLNAGIPVIVLETSQEPLARGLAT 334
Query: 190 VRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLE 249
+R N Q++V KGK+T E E+ + LL +DY D D+ IEA+ E++ +K+ +F +L+
Sbjct: 335 IRRNYQAQVDKGKLTPEAMEQRMGLLRPTVDYADLADCDLAIEAVFEDMDVKRAVFTELD 394
Query: 250 KYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIV 309
+ P ILASNTST+D++ I T +VG HFFSPA+VM LLEIVR ++T+ V+
Sbjct: 395 EVMKPGAILASNTSTLDVDTIAAFTRRPADVVGMHFFSPANVMTLLEIVRADKTADDVLA 454
Query: 310 DLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMG 369
+ +G++I K +V G C GF NRM Y AA L+E G ID AI FG MG
Sbjct: 455 TVSAVGQRIGKVTVVSGVCDGFIGNRMLARYRGAANALLEAGASPERIDSAIEDFGYAMG 514
Query: 370 PFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-RRK 428
P+R+ DL G + A + P+ + I + E R G+ T G+Y Y+ RR
Sbjct: 515 PYRVGDLAGGDIGWAIRKRRYAENPD-LPRDEISDRLCEMGRFGQKTGAGWYDYEPGRRD 573
Query: 429 ASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAAD 488
A P P V + +E + + ++IV+ + F +V+E R+ EGIA++A+D
Sbjct: 574 AIPSPVVAELLESYHREKRT----RRQDFTPEEIVQRLVFALVDEGARILDEGIALRASD 629
Query: 489 LDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCYFDQG 529
+D+ + G GFP +R + G + + + L FD G
Sbjct: 630 IDVVYLAGYGFPRHRGGPMFYAG-TVGLATVEQALRTFDAG 669
>gi|73537708|ref|YP_298075.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
gi|72121045|gb|AAZ63231.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
Length = 704
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 171/504 (33%), Positives = 262/504 (51%), Gaps = 9/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ K + + A + GLVD + + V+ + ++LE P T + I
Sbjct: 155 LMLSGKHLSAKAAQAAGLVDRLAEGDDPVAAGLAYVNELLEQGAPLRRT--RDLAIADKA 212
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +A+ K+ L P ++ V A V GL KE F + L S
Sbjct: 213 AALAELDTLQAETAKKTRGLFSPQKIVECVRAAVELPFDEGLAKERALFVECLNSPQRAG 272
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R T+KVP G APR + ++A++GGG MG+GI A + + PV++ E +
Sbjct: 273 LVHAFFAERETAKVPEAQ--GAAPRALNRIAVIGGGTMGAGITVAALDTGLPVVMIERDA 330
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ + G V + KG+MT E ++ T YES DVD+VIEA+ E++ +
Sbjct: 331 ESIARGQANVEKVYDGLIAKGRMTPEGKAAIMARYTPSTSYESIADVDLVIEAVFEDIEV 390
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F L++ C P +LA+NTS +D++ I ++G HFFSPA++M LLEIV
Sbjct: 391 KKAVFQQLDRVCKPGAVLATNTSYLDIDAIAGSISRPQDVIGLHFFSPANIMKLLEIVVP 450
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ SP V+V ++ K++KK P+ G C GF NR+ Y QAA ++E G Y ID A
Sbjct: 451 AKVSPDVVVTAFELAKRMKKIPVRAGVCDGFIGNRILAVYKQAADYIMEDGASPYEIDEA 510
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG PMGPF++ DL G + AT + + + + E G+ T +GF
Sbjct: 511 VRGFGYPMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEVADRICERGWFGQKTGRGF 570
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY + R PD EV +E R G+A P+ K + ++I+ +VNE +V
Sbjct: 571 YLYPQGARIGQPDREVLAIVEAERQKKGIA--PR--KFTAEEIMRRYMAAMVNEGAKVVE 626
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D+ + G GFP +R
Sbjct: 627 EGIALRPLDVDVTFLSGYGFPRFR 650
>gi|407798586|ref|ZP_11145493.1| peroxisomal bifunctional enzyme [Oceaniovalibus guishaninsula
JLT2003]
gi|407059547|gb|EKE45476.1| peroxisomal bifunctional enzyme [Oceaniovalibus guishaninsula
JLT2003]
Length = 704
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 165/512 (32%), Positives = 269/512 (52%), Gaps = 26/512 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL----VSTARQWALDILEHRRPWVATLYKTDKI 56
++ + + + +EA LGL+D + + ++ AR+W LD E R P +
Sbjct: 154 LVTSGRQISADEALKLGLIDTLAEGDDPRAAGLAEARRW-LD--EGRAPRRLSETAAPDA 210
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
+P + RA+ K A P+ +DVV G+ G+ E + F L+R+
Sbjct: 211 DP-----QTLDRWRARVAKSARGQVAPLRALDVVADGLAMPFADGMAMERQAFMDLMRTP 265
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+++H FFA+R ++ + G+ PR+V ++ ++GGG MG GIA + +++ V L
Sbjct: 266 ERAAMIHAFFAERRAAQQDDLA--GVKPRKVDRIGVIGGGTMGQGIAASALMAGLDVTLV 323
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTG----VLDYESFKDVDMVIE 232
E ++ E G + L ++GK+ Q+ +L+ G V Y++ D+VIE
Sbjct: 324 ERDDAAAEKARGGIGKMLDGAARRGKIAQDA---PAALMDGSFRAVTRYDALAQADLVIE 380
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A+ EN+ +KQ +F L+ C P +LA+NTS +D+N I + T ++G HFFSPAHVM
Sbjct: 381 AVFENMEVKQDVFRTLDGICRPGAVLATNTSYLDVNRIADATARPQDVIGLHFFSPAHVM 440
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
LLEIV ++T+P+V + K++ K + G C GF NRM Y AA +V G
Sbjct: 441 RLLEIVVADRTAPEVAATAFALAKRMGKIGVRSGVCDGFIGNRMLSTYRAAADHMVLDGA 500
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRA 412
Y IDRA+ FG PMGP+++ DL G + AT + R + + E R
Sbjct: 501 SPYDIDRAMVAFGFPMGPYQVGDLAGLDIGHATRQRKAATRDPRERVPVFADRLVEAGRL 560
Query: 413 GETTRKGFYLYDERRKAS-PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G T +G+Y+YD+ A PDPEV+ ++ R+ G+A P+ + S+++I +V
Sbjct: 561 GRKTGRGYYIYDDETPAGRPDPEVEPMLDGIRADLGIA--PR--QFSDEEIQSRYMAAMV 616
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE R+ EGIA +A+D+D+ + G GFP ++
Sbjct: 617 NEGARILDEGIAARASDIDVVLLHGYGFPRWK 648
>gi|163857274|ref|YP_001631572.1| fatty oxidation complex alpha subunit [Bordetella petrii DSM 12804]
gi|163261002|emb|CAP43304.1| putative fatty oxidation complex alpha subunit [Bordetella petrii]
Length = 705
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 241/433 (55%), Gaps = 7/433 (1%)
Query: 72 QARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGT 131
Q + + L P +D V+A + GL+ E F + L S +LVH FFA+R T
Sbjct: 227 QVQSRQRGLFSPAKIVDAVQAALDQPFDEGLRTERALFLQCLDSPQRAALVHAFFAERET 286
Query: 132 SKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVR 191
+K P PR ++++ ++GGG MG+GIA A++ + PV++ E N++ L G RV
Sbjct: 287 AKAPETRQA--RPRPLERLGVIGGGTMGAGIAVAMLDAGLPVVMVEQNDEALARGRARVE 344
Query: 192 ANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKY 251
VKKG++ + ++ TG YE+ D D+++EA+ E++ +K +FA+L++
Sbjct: 345 QVYDLLVKKGRLDAAGKAERMARYTGATRYEALADADLIVEAVFEDMDVKLAVFAELDRI 404
Query: 252 CPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDL 311
P +LA+NTS +D+N I T ++G HFFSPA++M LLEIV ++P +
Sbjct: 405 AKPGAVLATNTSYLDINRIAAATSRPGDVLGLHFFSPANIMKLLEIVVGANSAPDTVATG 464
Query: 312 LDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPF 371
++ ++++KTP+ G C GF NR+ Y QAA L++E G Y ID A+ FG PMGP+
Sbjct: 465 FELARRLRKTPVRAGVCDGFIGNRILAVYRQAADLMLEDGASPYQIDDAVRAFGYPMGPY 524
Query: 372 RLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKAS 430
++ADL G + AT + R I + E G+ T +G+YLY D R +
Sbjct: 525 QVADLAGGDIGWATRKRRAATRDPRLRYVQIPDRLCERGWFGQKTGRGYYLYPDGARTGT 584
Query: 431 PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLD 490
PDPEV I+ R +GV P+ + +++DI+ +VNEA V EGIA++ D+D
Sbjct: 585 PDPEVLAIIDAERQRAGVT--PR--QFTQEDILRRYLAAMVNEAANVLREGIALRPLDID 640
Query: 491 IASVMGMGFPPYR 503
+ + G GFP +R
Sbjct: 641 VVFLSGYGFPRFR 653
>gi|94497668|ref|ZP_01304236.1| fatty oxidation complex, alpha subunit [Sphingomonas sp. SKA58]
gi|94422885|gb|EAT07918.1| fatty oxidation complex, alpha subunit [Sphingomonas sp. SKA58]
Length = 689
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/503 (32%), Positives = 265/503 (52%), Gaps = 15/503 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + + +K EA SLGLVD VV L A +A I+ H + D +
Sbjct: 152 IITSGRQIKAAEALSLGLVDTVVEDAALRHNALAFAHRIVAHGSDKPRVRDRADALSADR 211
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ E+F A ++ P I+ V+A V GL KE + F++L+ S +
Sbjct: 212 DRPELFTAFAAANARRFKGFVAPAAIIEAVKAAVTLPFEQGLAKETDLFERLIASPESAA 271
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
H+FFA+R ++VP + +A ++ V ++G G MG GI + + PV L E ++
Sbjct: 272 QRHVFFAEREAARVPDIGPDTVAID-IRSVGVIGAGTMGGGITMNFLNAGIPVTLLETSQ 330
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ GI +R N ++ KG+MT + E+ + L+ LD S D D++IEA+ E++ +
Sbjct: 331 EALDRGIATIRRNYEATAVKGRMTAAQVEQRMDLIAPSLDLSSLTDADLIIEAVYESMDV 390
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K IFA L++ ILASNTS +DLN I T + +VG HFFSPA+VM LLE+VR
Sbjct: 391 KTGIFASLDRIARQGTILASNTSFLDLNCIAAATSRPEWVVGLHFFSPANVMRLLEVVRG 450
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS V+ + + K+I K ++ G C GF NR+ P A ++ T + IDR
Sbjct: 451 AETSKAVVATAMRLAKRIGKVAVLSGVCDGFIANRLMAPRGAQAEAMMLEDTPIAEIDRV 510
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ +G MG F++ DLVG V N ERT ++ + R G+ G+
Sbjct: 511 LVDYGFAMGHFQMMDLVGLDV-------IGRNATERTVMGDLVAV----GRLGQKRGAGY 559
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y YD++R++ K I++ + G+A + ++ ++ + +PVVNE ++ E
Sbjct: 560 YDYDDKRRSRFSDVTGKLIKEVAAARGIASNRTS---GDEALLGRLLYPVVNEGAKILEE 616
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIA++A+D+DIA+V+G +P YR
Sbjct: 617 GIALRASDIDIAAVLGYNWPVYR 639
>gi|410860966|ref|YP_006976200.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii AltDE1]
gi|410818228|gb|AFV84845.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii AltDE1]
Length = 719
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 191/508 (37%), Positives = 274/508 (53%), Gaps = 21/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKT--DK-IE 57
MMLT P + ++A G+VD VV + L+ A Q+AL R+P K+ DK +E
Sbjct: 178 MMLTGSPARAKQAKKYGIVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKMLE 233
Query: 58 PLGEAREI-FKFAR-AQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
G R + FK AR A K N P IDV+E G+ +AGL+ EAE F KL+ +
Sbjct: 234 KTGPGRNMMFKKAREATFAKTKGNYPAPGHIIDVIETGINEDMKAGLKAEAEAFGKLVMT 293
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
L IFFA K GV G+ P ++KKV +LGGGLMG GIA + PV
Sbjct: 294 PESFQLRQIFFATTEMKKENGVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVR 351
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+V + + + L +VKK M + +K ++LLTG LDY ++DVD+V+EA+
Sbjct: 352 IKDVRAEGIANAMKYSYDILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDVDIVVEAV 411
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++ LKQ++ AD+E+ C I ASNTS+I + I + ++G H+FSP MPL
Sbjct: 412 FEDLDLKQKMVADIEENCKESTIFASNTSSIPITQIAAEAARPENVIGLHYFSPVDKMPL 471
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
E++ +TS QVI ++ KK KTP+VV + GF VNR+ PY A L+ G +
Sbjct: 472 AEVIAHEKTSDQVISSTVEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPI 531
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID+++ KFG P+GP +L D VG V +E F ER + D R G+
Sbjct: 532 EHIDKSLVKFGFPVGPVKLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGK 591
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
+KGFY Y+ ++ P EV + I + +S AKLSEK++ E ++NEA
Sbjct: 592 KNQKGFYSYEGKK---PGKEVDESIYELLGLS------PSAKLSEKEVAERCVLMMLNEA 642
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPY 502
R EG+ A D DI ++ G+GFPP+
Sbjct: 643 ARCLDEGVIRNARDGDIGAIFGIGFPPF 670
>gi|393767275|ref|ZP_10355824.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium sp.
GXF4]
gi|392727176|gb|EIZ84492.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium sp.
GXF4]
Length = 690
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 173/507 (34%), Positives = 273/507 (53%), Gaps = 22/507 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRR-PWVATLYKTDKIEPL 59
MMLT +PV E A LG+VDAVV LV AR AL++ + P V + D + P
Sbjct: 149 MMLTGEPVSAEIAAKLGIVDAVVL-GDLVPAARIRALELADSGALPRVRD--RVDTLTP- 204
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGP-RAGLQKEAEDFQKLLRSETC 118
EAR+ F+ A K+ P T+ V AG+ A + E +F+ L+
Sbjct: 205 -EARQAFEAKAEAAVKRDPEATNVHALARAVRAGLDPDAFDAAVAVERAEFRTLVEDPRS 263
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRR-VKKVAILGGGLMGSGIATALILSNYPVILKE 177
K+L + FFA+R ++VPG++ PRR V+ A++G G MG GIA + PV + E
Sbjct: 264 KALRYAFFAEREAARVPGLSKD--TPRRPVETAAVIGAGTMGGGIAMCFANAGIPVTVIE 321
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
LE G+ RV+ K+G +T+ + ++ I +TG + E+ + D+VIEA E+
Sbjct: 322 TEAGALERGLDRVKGLYAGSAKRGSITEAQRDERIGRITGAIGLENAGEADIVIEAAFED 381
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++K++IF+ L+ P ILA+NTS +D++ I T ++G HFFSPA+VM L+E+
Sbjct: 382 MAVKREIFSKLDGIAKPGAILATNTSYLDVDAIAAVTGRPQDVLGLHFFSPANVMRLVEV 441
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR ++T+P V+ L + K++ K P+ VG C GF NR+ ++AA L+ G + +
Sbjct: 442 VRASKTAPDVLATALHLAKRLNKLPVTVGVCFGFVGNRILERRSRAAERLLLEGALPHAV 501
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+T FG MGPF ++DL G + + F P + + E R G+ T
Sbjct: 502 DAAVTGFGFRMGPFAMSDLAGLDIGWRSRKDFGGRAP-------VADALAEMGRFGQKTG 554
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+GF++Y D R + DP+V+ IEK + G+A + +I+ + +P+VNE R
Sbjct: 555 RGFFVYSDGARTGTRDPKVEALIEKTAAEHGIA----RRSFTPDEIIARLMYPMVNEGAR 610
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA + D+D + G +P +R
Sbjct: 611 ILEEGIAARPGDIDTIWINGYNWPAWR 637
>gi|149377817|ref|ZP_01895548.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Marinobacter
algicola DG893]
gi|149357875|gb|EDM46366.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Marinobacter
algicola DG893]
Length = 698
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/440 (37%), Positives = 260/440 (59%), Gaps = 9/440 (2%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
F F R A N P+ C++ V+A V G++ E E F L+++ ++L H F
Sbjct: 214 FMFTRNTVGAMAKNYPAPLKCVEAVKAAVTMPFDKGMEVEREAFVNLMQTPESRALRHAF 273
Query: 126 FAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLE 184
F++R TSK+ V +D + R ++ V ++GGG MG+GI+ + + PV L E+ ++ L+
Sbjct: 274 FSERLTSKIADVPSDTPV--RDIQSVGVIGGGTMGTGISINFLNAGIPVTLVEMKQEGLD 331
Query: 185 AGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQI 244
G+ ++ + RVKKG+M+++ + ++LLT L Y+ +VD+VIEA+ E + +KQ +
Sbjct: 332 RGVAAIQKVYEGRVKKGRMSEDDAKAKMALLTPSLTYDDLSNVDLVIEAVFEEMGVKQSV 391
Query: 245 FADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTS 304
F L++ C ILASNTST+DL+ I T + ++G HFFSPA++M LLE+VR +T+
Sbjct: 392 FEKLDEVCKQGAILASNTSTLDLDKIASFTKRPEDVIGLHFFSPANIMKLLEVVRGEKTA 451
Query: 305 PQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKF 364
V+ + + K IKKT +V G C GF NRM Y + A L++E G + ID+AI KF
Sbjct: 452 KDVLATAMKLAKTIKKTAVVSGVCDGFIGNRMINQYQREALLMLEEGASVQQIDKAIEKF 511
Query: 365 GMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYD 424
G MGP R+ADL G + A + + P+ K ++ + E R G+ T GFY Y+
Sbjct: 512 GFAMGPLRMADLAGGDIGWAIRKRQYQENPD-MVKMVLADRICEMGRYGQKTGAGFYRYE 570
Query: 425 E-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIA 483
R A DPEV K +++ R+ G I P+ K+S ++IVE + +VNE ++ EGIA
Sbjct: 571 PGNRNALHDPEVDKVVDEVRAELG--IKPR--KISNQEIVERCVYALVNEGAQILDEGIA 626
Query: 484 VKAADLDIASVMGMGFPPYR 503
+A+D+D+ + G GFP +R
Sbjct: 627 QRASDIDMVYLTGYGFPVFR 646
>gi|386856885|ref|YP_006261062.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus gobiensis I-0]
gi|380000414|gb|AFD25604.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Deinococcus
gobiensis I-0]
Length = 692
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 270/506 (53%), Gaps = 18/506 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML+ VK EA +LGLVD VV L ++A ++A + R L + G
Sbjct: 152 MMLSGSSVKATEARTLGLVDEVV-DGDLRASAVEFARAHADAR-----PLPRISGRGVEG 205
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ E+F ARA K P + +D+ E G EA+ F + S ++
Sbjct: 206 ASPELFAAARAGLGKTHKGQYSPGLIVDLAEMAATKPFAEGWDAEAQLFMQAKDSPQSRA 265
Query: 121 LVHIFFAQRGTSKVPGV---TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L H+FFA+R KV G+ T +G V++V I+G G MG GIA + PV + E
Sbjct: 266 LRHVFFAEREAGKVRGLGKDTPVG----DVRRVGIIGAGTMGGGIAMNFLNVGLPVTIVE 321
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L+ G+ +R N ++ KKG++T ++ EK + LLT LD + D D++IEA+ EN
Sbjct: 322 TAQDALDRGLATIRRNYENSAKKGRLTGDEVEKRMGLLTPTLDMGALADADLIIEAVFEN 381
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ IF L+ P ILASNTST+++N I T ++++G HFFSPA+VM LLEI
Sbjct: 382 MDVKKDIFTRLDAVAKPGAILASNTSTLNVNEIAAVTARPEQVIGLHFFSPANVMKLLEI 441
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR ++TS V+ L + +KI K +VVG C GF NRM Y A LVE G D +
Sbjct: 442 VRADKTSDTVLATSLAVARKIGKVGVVVGVCDGFVGNRMVHRYGDEARKLVEEGADPQAV 501
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ G+PMGPF ++D+ G + A + E + I+ E R G+ T
Sbjct: 502 DAAMHALGLPMGPFEMSDMAGLDIGYAIRQHQAKERGEPKPDGWLDRIV-ETGRKGQKTG 560
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G Y Y + R+ P+ E+ + I R+ G+ P+ ++ + +I + + + +VNE ++
Sbjct: 561 GGIYDYGDDRRPRPNAEMGQLIADYRAEKGLT--PR--EIGQDEITKRLAYSLVNEGAQI 616
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA +A D+D+ + G GFP YR
Sbjct: 617 LEEGIAQRAGDIDVIYLYGYGFPAYR 642
>gi|359797543|ref|ZP_09300127.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Achromobacter arsenitoxydans SY8]
gi|359364654|gb|EHK66367.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Achromobacter arsenitoxydans SY8]
Length = 695
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 165/510 (32%), Positives = 266/510 (52%), Gaps = 24/510 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDI----LEHRRPWVATLYKTDKI 56
M+ + E A GL+D V + L A +AL + L+ RR
Sbjct: 154 MICGGDAIDAETAADCGLLDEVYGSD-LRQRAAAYALKVSAVPLDGRRV---------GR 203
Query: 57 EPLGEARE--IFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLR 114
+PL + +++ AR +A ++ P+ C+ VE + + GL E E F +L+
Sbjct: 204 QPLAAPADAGVYERARQEAARRYRGCVAPLACVACVEHAAGATLQDGLAFERERFLELVN 263
Query: 115 SETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
K+ H+FFA+R K+P A ++KV ++G G MG GIA +L + V+
Sbjct: 264 GGQSKAQRHLFFAERAAVKLPPEWRAAGA---IRKVGVVGAGTMGGGIAMSLANAGLDVV 320
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
L E + + LE G +R N + KGK++ + E+ + LD + +D D+VIEA
Sbjct: 321 LIERDAQALERGWSAIRKNYAATAAKGKLSAVQVEERQGRIRASLDMDELRDADLVIEAA 380
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++ +K+Q+F L++ C P ILASNTS +D++ I T +++G HFFSPA+VM L
Sbjct: 381 FEDMGVKRQVFEALDRICKPGAILASNTSRLDVDQIAGFTGRPAQVLGTHFFSPANVMRL 440
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE+V+ +T V+ + + + + K P++VG C GF NRM PYT+ A L+E G
Sbjct: 441 LEVVKGRETDGNVVAAVFKLARAMGKLPVLVGVCDGFVGNRMVSPYTREAHFLLEEGATP 500
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
+D A+ +FG+ MGP R+AD+ G ++ A + + P S + + E R G+
Sbjct: 501 SQVDGALQRFGLAMGPLRMADMAGLDISWAFRKRTASSRPADLRYSRVADSLCEQGRFGQ 560
Query: 415 TTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
T GFY Y+ R D +V IE+ GV + +++++IV+ + +VNE
Sbjct: 561 KTGSGFYRYEAGSRTPLEDADVLALIERCAREDGV----ERRAVTDEEIVQRTMYALVNE 616
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ EGIA +A+D+D+ V G GFP +R
Sbjct: 617 GARILEEGIARRASDIDVIYVNGYGFPAHR 646
>gi|295677036|ref|YP_003605560.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
gi|295436879|gb|ADG16049.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
Length = 706
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 262/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++L+ + +EA +LGL+D + A +++ +A ++L P V +
Sbjct: 157 LILSGRHASAKEALALGLIDRLGASGDILAEGLAYAHELLAAHAP-VRRTRDAAALNDRA 215
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ AR + K+A L P+ +D VEA + GL+ E + F + L S
Sbjct: 216 ASLAAVAKARDETAKKARGLFSPLKIVDAVEAAIEQPFDEGLKFERKLFLQCLDSPQRAG 275
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R K P D PR+++ + ++GGG MG+GIA A++ + PV + E +E
Sbjct: 276 LVHAFFAEREVLKAPETRDA--KPRQLEAIGVIGGGTMGAGIAIAVLDAGLPVTMIERDE 333
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G + + KG++T +K T++ +G Y++ D+VIEA+ E++ +
Sbjct: 334 ASLARGRAHIDKVYDGLIAKGRLTADKKAATMARWSGSTSYDALAHADLVIEAVFEDLDV 393
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L++ C P +LA+NTS +D+ I ++G HFFSPA++M LLE+V
Sbjct: 394 KKAVFAELDRVCKPGAVLATNTSYLDIEAIAASISRPADVIGLHFFSPANIMKLLEVVVP 453
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
Q S V+ ++ KK++KTP+ G C GF NR+ Y AA L+E G Y ID A
Sbjct: 454 KQVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRLLAVYRAAADALMEDGASPYQIDAA 513
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG+PMGPF++ DL G + A + I + E G+ T +GF
Sbjct: 514 VRAFGLPMGPFQVVDLAGGDIGWAARKRRAATRDPNARYVQIADRLCERGWFGQKTGRGF 573
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY E R DPEV+ I+ R +G I P+ +++ I+ ++NE V
Sbjct: 574 YLYPEGSRGGMTDPEVEAIIDAERKRAG--ITPR--SFTDEQIMRRYMAAMINEGANVVH 629
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D+ + G GFP YR
Sbjct: 630 EGIALRPLDVDVTLLYGYGFPRYR 653
>gi|254283934|ref|ZP_04958902.1| peroxisomal bifunctional enzyme [gamma proteobacterium NOR51-B]
gi|219680137|gb|EED36486.1| peroxisomal bifunctional enzyme [gamma proteobacterium NOR51-B]
Length = 696
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 263/534 (49%), Gaps = 18/534 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ P+ E+A + GL+D VV + L A+D + HR + + P
Sbjct: 150 LITQGNPMPAEQALTSGLIDQVVQGDLLAG-----AVDYV-HRLIAEDAPRRRARDLPFS 203
Query: 61 ---EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
E RE AR K+ P +D +EA +GL +E E F +
Sbjct: 204 LSDEDREAIASARKSLAKKTRGEHAPQRILDCIEAAATLDFNSGLARERELFDACMTDPQ 263
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++ H+FFA+R +K+ G+ D +APR + V I+G G MG GIA + PV L +
Sbjct: 264 SAAMRHMFFAERQAAKIQGM-DPSVAPRDIGSVGIIGAGTMGGGIAMCFAQAGIPVTLLD 322
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N + AG+ R+R N VK+G+ ++E+ ++ + G DY + D+VIEA+ EN
Sbjct: 323 MNSDAVTAGLDRIRKNYAISVKRGRFSEEQVNAIMANIEGSSDYADLAETDLVIEAVFEN 382
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++KQ +F L+ C ILASNTS ++ I T ++G HFFSPA+VM LLE+
Sbjct: 383 LAVKQDVFRSLDSVCKADAILASNTSYQSIDDIAAVTSRPQSVLGTHFFSPANVMKLLEV 442
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR QT ++I + +GKKI K P++ G C GF NRM Y + A L + G I
Sbjct: 443 VRGAQTDDEIIATAMAVGKKIGKVPVLAGMCYGFIGNRMLRSYGREAQLCLIEGATPAQI 502
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ ++GM MGP + DL G + Q + ++ + E R G+ +
Sbjct: 503 DGAMERWGMAMGPIAVGDLAGLDIGYKAREQLTPEQKGKPASYIVADRLVEMGRLGQKSG 562
Query: 418 KGFYLYD-ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y YD E R DP V + + + G+ K +++++IV+ + + NE R
Sbjct: 563 AGYYQYDPETRARIEDPSVIELAAQCAAELGI----KQRSITDEEIVDRLTLALANEGAR 618
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR---FVTFIHRGFSKSSSCFKNLLCYFD 527
+ EGIA +A+D+D+ G GFP +R T RG + K L D
Sbjct: 619 ILEEGIAQRASDIDVVYCFGYGFPRHRGGPMWTIEARGLDNAVQRMKALGNSLD 672
>gi|406976712|gb|EKD99078.1| hypothetical protein ACD_23C00145G0001, partial [uncultured
bacterium]
Length = 446
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 153/399 (38%), Positives = 220/399 (55%), Gaps = 7/399 (1%)
Query: 106 AEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATA 165
AE FQ L S LVH FFA+R P ++ PR + V ++GGG MGSGI A
Sbjct: 1 AEAFQTCLGSPQRAGLVHAFFAERAAGHSPVAPEV--LPRAISSVGVIGGGTMGSGICVA 58
Query: 166 LILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFK 225
L+ + V++ E +EK LEAG+ RV+ V+ G+ T+E +++ + G +DY F
Sbjct: 59 LLDAGLSVVMLERDEKSLEAGLARVKKVYSRLVESGRATEELTTNSLNRIRGTVDYADFS 118
Query: 226 DVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHF 285
DVDMVIEA E++ +K+ IF L+ C ILA+NTS +D+NLI ++G HF
Sbjct: 119 DVDMVIEAAFEDLEVKKGIFKTLDAVCKKGAILATNTSYLDVNLIAAAVSRPHDVIGLHF 178
Query: 286 FSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAF 345
FSPA+VM LLE+V + + V+ D+ +++KK P+ G C GF NR+ F Y +AA
Sbjct: 179 FSPANVMKLLEVVVPAKVADDVVATGFDLARRLKKIPVRSGVCDGFIGNRILFTYREAAS 238
Query: 346 LLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI 405
++E G Y ID+A+ FG MGPFR DL G + AT + I +
Sbjct: 239 YMLEDGASPYDIDQALEDFGFAMGPFRTNDLTGGDIGWATRRRKDATRNPAARYVQIADM 298
Query: 406 MQEDKRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVE 464
+ E G+ T +G+Y Y E RK PD EV IE+ R G+ P+ S IVE
Sbjct: 299 LYERGWLGQKTGRGYYRYPEGERKGLPDDEVLALIEQERQSRGLT--PR--HFSHAQIVE 354
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++NEA +V +GIA++ +D+D+ V G GFP +R
Sbjct: 355 RYMAALINEASKVLEDGIALRPSDIDVVMVNGYGFPRWR 393
>gi|294899893|ref|XP_002776796.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Perkinsus marinus ATCC
50983]
gi|239883997|gb|EER08612.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Perkinsus marinus ATCC
50983]
Length = 733
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 180/523 (34%), Positives = 269/523 (51%), Gaps = 46/523 (8%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
ML +P+ A ++D +V ++L+ A AL RR T D++ +G
Sbjct: 159 MLGGQPIPAALAKRQKMIDEIVPADKLIDAAAAIAL-TKPVRRTSEMTCSTADRVMVVGG 217
Query: 62 ARE--IFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGP--RAGLQKEAEDFQKLLRSET 117
A E I + R + + AP V+A V SG + G + E E+F KLL S+
Sbjct: 218 AVEMGINQIDRFRKHQIAPEAIG-----RCVKAAVESGADFQKGCRVEQEEFDKLLYSKE 272
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L H+FFA+R +KV G L P +KKV ++G GLMG GIA + PV+L +
Sbjct: 273 SGALRHLFFAERIANKVSG---LRAKPLPIKKVGVVGAGLMGGGIAMCFVAKGMPVVLLD 329
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
E+FL G+G ++ N ++ V + + E+ K + L+ LDY F D D+VIEA+ EN
Sbjct: 330 AKEEFLSRGMGLIKKNYETSVARKSLKLEEAAKRLKLIKPSLDYADFGDCDIVIEAVFEN 389
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSK-DRIVGAHFFSPAHVMPLLE 296
+ LKQ IF L+K P +L SNTS++D++ I + +VG HFFSPA+VM LLE
Sbjct: 390 LKLKQDIFKQLDKVTKPDALLCSNTSSLDIDAIASMVPKRAANVVGTHFFSPANVMKLLE 449
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
VRT S I ++ +GK I K ++VGNC GF NRM PY +VE G DL
Sbjct: 450 NVRTKGASDTTIATVMAMGKLINKVAVLVGNCDGFVGNRMLGPYGAEVRQMVEEGGDLAE 509
Query: 357 IDRAITKFGMPMGPFRLADLVG---------------FGVAIATGMQFIENFPERTYKSM 401
D FGM MGP ++DLVG A+A G + ++
Sbjct: 510 FDAVAVDFGMAMGPLSMSDLVGQDLFWRARKMAGDMKMETAVAIGPHDLTDW-------- 561
Query: 402 IIPIMQEDKRAGETTRKGFYLYDERRKASP-DPEVKKFIEKARSMSGVAIDPKFAKLSEK 460
+ E R G+ KG Y+Y + R D E+ + +++ + GV P+ + EK
Sbjct: 562 ----LCEKGRFGQKAGKGVYVYGKGRGDKKIDQEILEGVKEIQKRKGVT--PRV--IDEK 613
Query: 461 DIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+++E + FP+VNE ++ EG+A + +D+DI + G GFPP +
Sbjct: 614 EMLERMLFPLVNEGFKILEEGMAQRPSDIDIVWIYGYGFPPVK 656
>gi|390167396|ref|ZP_10219386.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum B90A]
gi|389589946|gb|EIM67952.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum B90A]
Length = 705
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 245/447 (54%), Gaps = 8/447 (1%)
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
EIF ARA+ + I VEA V AG++ E F++L+ ++ K+L H
Sbjct: 211 EIFDAARARLSRSGERYPALPEIIAAVEAATVLDFAAGMEVEKSAFKRLIETDVSKALRH 270
Query: 124 IFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKF 182
F A+R S V + D+G+ RR+ A++G GLMG+GIA L + V L E +E+
Sbjct: 271 GFLAERRASHVRAIGADVGV--RRLDTAAVIGAGLMGTGIAQCLAAAGIEVTLLETSEQA 328
Query: 183 LEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQ 242
V L V KG++T ++ E +L+ DY ++VD+ IEA+ E++ K+
Sbjct: 329 TVRSEKSVDDVLGRAVAKGRLTAKQAEAQKALIRWTTDYGDLRNVDIAIEAVFESLEAKR 388
Query: 243 QIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQ 302
+F +L++ P ILASNTST+DLN I T +VG HFFSPA+VM LLE+VR ++
Sbjct: 389 AVFEELDRNLRPGAILASNTSTLDLNAIAAFTQRPADVVGTHFFSPANVMRLLEVVRGDR 448
Query: 303 TSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAIT 362
T+P V+ + G++I K ++ G C GF NRM Y + A LVE G + +D A+
Sbjct: 449 TAPDVVKTAMQFGRRIGKVSVLSGVCDGFIGNRMVEEYFRQAMFLVEEGALPFEVDEALE 508
Query: 363 KFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYL 422
+FG MGPF++ADL G + + + + P+ Y S ++ + E R G+ T+ G YL
Sbjct: 509 EFGFSMGPFKVADLAGLDIGWSIRKRRAQERPDMPY-SPVLDGLCEQGRFGQKTKAGVYL 567
Query: 423 YDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGI 482
Y + R A DPEV++ I +A ++S+ +IV+ +VNE ++ EGI
Sbjct: 568 YADGRTAVRDPEVERSIAAFSQSQNIA----RREISKSEIVDRCVLALVNEGAKILEEGI 623
Query: 483 AVKAADLDIASVMGMGFPPYRFVTFIH 509
A +A+D+D+ + G GFP +R H
Sbjct: 624 AQRASDIDVVYLAGYGFPDFRGGPMFH 650
>gi|374333398|ref|YP_005083582.1| fatty oxidation complex subunit alpha [Pseudovibrio sp. FO-BEG1]
gi|359346186|gb|AEV39560.1| fatty oxidation complex, alpha subunit [Pseudovibrio sp. FO-BEG1]
Length = 717
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 165/508 (32%), Positives = 272/508 (53%), Gaps = 18/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + P+ + A S G++D V V+ +A ++++ P L + ++
Sbjct: 158 MIPSGAPIGADAAKSAGILDGVSDEADAVAAGLAFARSVIDNGTP----LRRCSELVAPA 213
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
++F A+A K+A P+VC++ +E + G+ KE E F +L S ++
Sbjct: 214 VDAQVFVDAKAAVAKRARGQKSPVVCVEAIEVASQTSFVDGMAKEREMFMELKNSAQHRA 273
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H FFA R K+P + G+APR +K + ++GGG MG+GIAT +++ V L E ++
Sbjct: 274 LSHAFFADRALGKLPEIE--GIAPRMLKSIGVIGGGTMGAGIATGALMNGLSVTLIERDD 331
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEK----FEKTISLLTGVLDYESFKDVDMVIEAIIE 236
L + N+ VKKGK++ ++ F + +SL T DY S ++D+V+EA+ E
Sbjct: 332 DALGRAKATIAKNVGGAVKKGKLSADQEQRIFAEALSLST---DYASLSELDLVVEAVFE 388
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++ +K+Q+F L++ C +LA+NTS +D+N I T ++G HFFSPAH+M LLE
Sbjct: 389 DIDVKKQVFEKLDEVCKEGAVLATNTSYLDVNAIAAVTKRPQDVIGLHFFSPAHIMKLLE 448
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+V ++T+P VI +GK ++K + G C GF NR+ Y AA +V G+ +
Sbjct: 449 VVVADKTAPDVIATGFLLGKIMRKVAVRAGVCDGFIGNRILATYRAAADAIVVDGSTPFE 508
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+D + +FG PMGP+ +ADL G + AT R M E G+ T
Sbjct: 509 VDEVMLEFGFPMGPYAVADLAGLDIGWATRKHKAPTRDPRERYFTFADRMCEQGWFGQKT 568
Query: 417 RKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KG+Y+Y D RK +P+P V + + R I+ K KL++ I++ +VNEA
Sbjct: 569 SKGYYVYEDGARKGTPNPAVLDILTEERKEK--RINAK--KLTKTQILDRYMAAMVNEAA 624
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
+V +GIA++ D+D+ + G GFP +R
Sbjct: 625 KVVEDGIALRPLDVDMTLIYGYGFPRWR 652
>gi|333893918|ref|YP_004467793.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas sp. SN2]
gi|332993936|gb|AEF03991.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas sp. SN2]
Length = 712
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 190/508 (37%), Positives = 274/508 (53%), Gaps = 21/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKT--DK-IE 57
MMLT P + ++A G+VD VV + L+ A Q+AL R+P K+ DK +E
Sbjct: 172 MMLTGAPARAKQAKKYGIVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKMLE 227
Query: 58 PLGEAREI-FKFAR-AQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
G R + FK AR A K N P IDV+E G+ G AGL+ EAE F KL+ +
Sbjct: 228 NTGPGRGMMFKKAREATFAKTKGNYPAPGYIIDVIETGMRDGIEAGLKAEAEAFGKLVMT 287
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
L IFFA K G+ G+AP ++KKV +LGGGLMG GIA + PV
Sbjct: 288 PESFQLRQIFFATTDMKKENGIE--GVAPEKMKKVGVLGGGLMGGGIAFVTSTKAGVPVR 345
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+V + + + L +VKK M + +K +SL+TG LDY ++D D+V+EA+
Sbjct: 346 IKDVRPEGIANAMKYSYDILNKKVKKRFMRSSEMQKQLSLITGTLDYSGYQDTDIVVEAV 405
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++ LKQ++ AD+E+ C + I ASNTS+I + I + + ++G H+FSP MPL
Sbjct: 406 FEDLDLKQKMVADIEENCKENTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPL 465
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
E++ TS QVI ++ KK KTP+VV + GF VNR+ PY A L+ G +
Sbjct: 466 AEVIAHETTSDQVISSTVEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAASLILAGEPI 525
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID+++ KFG P+GP +L D VG V +E F ER + D R G+
Sbjct: 526 EHIDKSLVKFGFPVGPVKLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGK 585
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
+KGFY Y+ ++ P EV + I S + + P KLSEK++ E ++NEA
Sbjct: 586 KNQKGFYSYEGKK---PGKEVDESI-----YSLLGLTPS-TKLSEKEVAERCVLMMLNEA 636
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPY 502
R E + A D DI ++ G+GFPP+
Sbjct: 637 ARCLDESVIRNARDGDIGAIFGIGFPPF 664
>gi|385208794|ref|ZP_10035662.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
gi|385181132|gb|EIF30408.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
Length = 706
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 265/507 (52%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++L+ + +EA +LGL+D + + + +++ + ++L P + +T + LG
Sbjct: 157 LILSGRHASSKEALALGLIDRLGSSDDILAEGLAYVHELLAAHAP----VRRTREAAALG 212
Query: 61 E---AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ + ARA+ K++ L P+ ID VEA + GL+ E + F + L S
Sbjct: 213 DRAASLAAVTAARAETAKKSRGLFSPLKIIDAVEAAIEQPFDEGLRLERKLFLECLDSPQ 272
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L+H FFA+R K P D PR + + ++GGG MG+GIA A + + PV + E
Sbjct: 273 RAGLIHAFFAEREVLKAPETRDA--KPRALNAIGVVGGGTMGAGIAVAALDAGLPVTMIE 330
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ L G+ + + KG+M+ +K ++ G Y++ D D+VIEA+ E+
Sbjct: 331 RDDASLARGLAHIEKVYDGLIAKGRMSADKKAAVMARWNGSTSYDALADADLVIEAVFED 390
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++KQ +FA+L++ C +LA+NTS +D++ I ++G HFFSPA++M LLE+
Sbjct: 391 LAVKQAVFAELDRVCKAGAVLATNTSYLDIDAIAASISRPADVIGLHFFSPANIMKLLEV 450
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V Q S V+ + K ++KTP+ G C GF NR+ Y AA ++E G Y I
Sbjct: 451 VVPKQVSADVVATAFEFAKNLRKTPVRAGVCDGFIGNRVLAVYRAAADAMMEDGASPYQI 510
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ FG PMGPF++ DL G + A + I + E G+ T
Sbjct: 511 DAAVRAFGFPMGPFQVVDLAGGDIGWAARKRRAATRNPAARYVQIADRLCERGWFGQKTG 570
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+GFYLY E R +PDPEV+ I+ R+ +G I P+ ++ +I+ ++NE
Sbjct: 571 RGFYLYPEGSRSGTPDPEVEAIIDAERARAG--ITPR--SFTDDEIIRRYMAAMINEGAN 626
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V E IA++ D+D+ + G GFP YR
Sbjct: 627 VVHERIALRPLDVDVTFLYGYGFPRYR 653
>gi|449509561|ref|XP_004186281.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal bifunctional enzyme
[Taeniopygia guttata]
Length = 725
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 174/520 (33%), Positives = 265/520 (50%), Gaps = 24/520 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ T K + EA LGLVD +V N + + R I + P +L ++ P
Sbjct: 150 MITTGKHIPATEALKLGLVDEIVEENTIEAAIRLANKVIGQPLGPRRLSLKPIPRL-PNM 208
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EA + A + +KQA P +C V A G+++E E FQ LL S ++
Sbjct: 209 EA--FLREALVKVKKQARGCLAPELCFQAVRAAAERPFAEGVRRERELFQVLLTSGQARA 266
Query: 121 LVHIFFAQRGTSKV---PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L + FFA+R + G + AP+ V+K A++G G MG GI T+L+ +N P++ E
Sbjct: 267 LQYAFFAERAVRRWATPSGASWSSAAPQPVRKAAVIGLGTMGRGIVTSLVKANIPLVALE 326
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFE-KTISLLTGVLDYESFKDVDMVIEAIIE 236
+ ++L G V L+ K + + + + L +D++ VD+VIEA+ E
Sbjct: 327 QDLEYLNKGRKAVMLLLEREAMKMERGAQALDFHNPARLQFTVDFDLLHHVDLVIEAVFE 386
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N++LK++IF L K C P +L +NTS ++++ I T +++G HFFSPAHVM LLE
Sbjct: 387 NMALKKEIFHKLSKICKPGALLCTNTSALNIDEIASATSCPQQVIGTHFFSPAHVMRLLE 446
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
I+ TSP I + + K +KK +VVGNC GF NRM FPY Q A L+E G+
Sbjct: 447 IIYGRHTSPTAIATAMQLAKALKKVGVVVGNCFGFVGNRMMFPYVQQAVFLLEEGSRPEA 506
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAI-------ATGMQFIENFPERTYK----SMIIPI 405
+D+ + FG +GPFR++DL G V TG P R S + +
Sbjct: 507 VDQVLEDFGFKLGPFRMSDLAGLDVGWRSRKDQGLTGPSLPAGTPARQRHGQRYSPLPDL 566
Query: 406 MQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIV 463
+ E R G+ T KG+Y Y+ R A PDP + F+ R I +F + +++I+
Sbjct: 567 LCEQGRFGQKTGKGWYQYERAGGRTARPDPWLHSFLSHYRDTH--HIKSRF--IDQEEIL 622
Query: 464 EMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E F ++NE + AEGIA LD+ + G G+P +R
Sbjct: 623 ERCLFSLINEGFAILAEGIASGPEHLDVIYINGYGWPKHR 662
>gi|307729102|ref|YP_003906326.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1003]
gi|307583637|gb|ADN57035.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1003]
Length = 706
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 167/510 (32%), Positives = 267/510 (52%), Gaps = 20/510 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + +EA + GLVD + A +++ + ++L A +T L
Sbjct: 157 LMLSGRHASAKEALAWGLVDRLGASEDILAEGLAYVHELLASH----AAARRTRDASALS 212
Query: 61 E---AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ + ARAQ KQA L P+ +D VEA + GL+ E + F + + S
Sbjct: 213 DRTASLAAVAAARAQTEKQARGLFSPLKIVDAVEAAITQPFEDGLRLERQLFLQCIDSPQ 272
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L+H FFA+R K P PR ++ + ++GGG MG+GIA A++ + PV + E
Sbjct: 273 RVGLIHAFFAEREVLKAPETR--AAKPRPLETIGVVGGGTMGAGIAVAVLGAGLPVTMIE 330
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+E L G + + KG+M+ K + ++ TG +E+ + D+VIEA+ E+
Sbjct: 331 RDEASLARGRAHIEKVYDGLIAKGRMSAAKKAELLARFTGSTSHEALANADLVIEAVFED 390
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++KQ +FA+L++ C +LA+NTS +D++ I T ++G HFFSPA++M LLE+
Sbjct: 391 LAVKQAVFAELDRVCKAGAVLATNTSYLDIDAIAAGTSRPADVIGLHFFSPANIMKLLEV 450
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V S V+ ++ KK++KTP+ G C GF NR+ Y AA ++E G Y I
Sbjct: 451 VVPRAVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRILAVYRSAADAMMEDGASPYQI 510
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI---MQEDKRAGE 414
D A+ FG PMGPF++ DL G + A + P R + + I + E G+
Sbjct: 511 DAAVRAFGFPMGPFQVVDLAGGDIGWAARKR---RAPTRNPAARYVQIADRLCERGWFGQ 567
Query: 415 TTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
T +GFYLY E R PDPEV+ I+ R+ +G I P+ ++ +I+ ++NE
Sbjct: 568 KTGRGFYLYPEGSRSGQPDPEVEAIIDIERARAG--ITPR--TFTDDEIIRRYMAAMINE 623
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
V EGIA++ D+D+ + G GFP YR
Sbjct: 624 GANVVHEGIALRPLDVDVTFLYGYGFPRYR 653
>gi|386286798|ref|ZP_10063982.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [gamma
proteobacterium BDW918]
gi|385280180|gb|EIF44108.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [gamma
proteobacterium BDW918]
Length = 701
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 159/508 (31%), Positives = 267/508 (52%), Gaps = 22/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA---PNQLVSTARQWALDILEHRRPWVATLYKTDKIE 57
M+ + K + +EA GL+D ++A P ++ A++ +D RP A +
Sbjct: 159 MISSGKAISADEALQCGLIDQIIAASLPESGIAYAKEL-IDNGAKVRPTSALIAS----- 212
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
P+ E F + + + P ++++E + G + E E F + S
Sbjct: 213 PVDE----HFFENKKNSLKPTGILAPAYILELIELATKTDIHEGQRVERERFLECRSSAG 268
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L HIF A+R +K+P + + PR + KVA++G G MG GIA + +PV L E
Sbjct: 269 SAALRHIFLAERACTKLPDIAP-SVTPRPINKVAVIGAGTMGGGIAMCFASAGFPVTLIE 327
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ L G+ ++ AN VK+G+++Q++ K IS + L Y D D+VIEA EN
Sbjct: 328 TAQENLNRGLDQIEANYNQSVKRGRLSQDQLAKAISNIKPSLQYADIADADLVIEATFEN 387
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ +F+ L + C P+CILA+NTS +D+N I + T ++GAHFFSPA++M LLE+
Sbjct: 388 MDVKKAVFSKLVEVCKPNCILATNTSYLDVNTIADVTGRPQDVIGAHFFSPANIMKLLEV 447
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VRT +T+P+V++ ++ I K+I K + VG C GF NRMF Y + A LL+ G +
Sbjct: 448 VRTQKTAPEVVMSVMVIAKRIGKVAVAVGVCHGFVGNRMFKAYARQAQLLLLEGCTPAQV 507
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIP-IMQEDKRAGETT 416
D I +GM MGP + DL G ++ + + + + +P ++ E R G+ +
Sbjct: 508 DTVIQTWGMAMGPLAVGDLAGIDISYRS--RRDQGICSGSIAEFALPDLLVEMGRLGQKS 565
Query: 417 RKGFYLYD-ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
G+Y Y+ E R D V I+ + + ++S +I++ + ++NE
Sbjct: 566 GSGYYNYEPETRARKNDQSVHDLIQSIANQWCIT----RREISNDEIIDRLSLALINEGA 621
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA + +D+D+ V G GFP +R
Sbjct: 622 HILDEGIAARPSDIDVVYVNGYGFPRWR 649
>gi|393775492|ref|ZP_10363805.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
gi|392717542|gb|EIZ05103.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
Length = 702
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 256/507 (50%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + +EA +GL+D + + + A WA +IL + +T + LG
Sbjct: 153 LMLSGRHASVDEAKRMGLIDRIATQDDPLEEACTWASEILAQG----GIVRRTRDAQALG 208
Query: 61 EAREIF---KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ + ARA ++A L P +D V+ + AG+Q E F + + S
Sbjct: 209 DSATSLAAVEAARAGNARKARGLFAPFQILDAVKDAIEQPFEAGIQAERARFLQCVDSPQ 268
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
LVH FFA+R K P PR V V ++GGG MGSGIA AL+ + VI+ E
Sbjct: 269 RAGLVHAFFAERRVRKAPETESS--QPRPVATVGVIGGGTMGSGIAVALLDAGLQVIMVE 326
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ L+AG RV + G+M + E + TG Y++F D+VIEA+ E+
Sbjct: 327 RDDASLQAGRQRVEKVYDRLIANGRMEVARKEAVLQRFTGATSYDAFAQADLVIEAVFED 386
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ +F +L++ C P ILA+NTS +D++ I ++G HFFSPA++M LLEI
Sbjct: 387 MDVKKAVFGELDRICKPGAILATNTSYLDIDAIAASISRPQDVIGLHFFSPANIMKLLEI 446
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + S V+ + K++K P+ G C GF NR+ + Y + A ++E G Y I
Sbjct: 447 VVPAKVSADVVATGFALADKLRKVPVRAGICDGFIGNRILYVYREVASHMMEDGASPYEI 506
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ +FG MGPFR DL G + AT + I + E G+ T
Sbjct: 507 DQALEEFGYAMGPFRTNDLTGGDIGYATRKRKAATRDPNARYVRIADQLCERNWLGQKTG 566
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+G+Y Y E R DPEV I+ R+ G I P+ S +DI+ V+NE+
Sbjct: 567 RGWYRYPEGSRSGQHDPEVLALIDAERAERG--IQPR--TFSSEDILRRYMAAVINESAN 622
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V + IA++ D+D+ V G GFP +R
Sbjct: 623 VLHDKIALRPLDIDVTLVHGYGFPRWR 649
>gi|220923283|ref|YP_002498585.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium
nodulans ORS 2060]
gi|219947890|gb|ACL58282.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium
nodulans ORS 2060]
Length = 691
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 171/495 (34%), Positives = 258/495 (52%), Gaps = 20/495 (4%)
Query: 8 VKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR-EIF 66
+K EAH LGL+D VV + LV+ LE R P VA ++ P G+A E
Sbjct: 162 LKAPEAHDLGLLDEVVTGDLLVAA--------LE-RAPHVAKRRVSELPVPRGDAAAEAL 212
Query: 67 KFARA-QARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
F+RA +A K P + I I G + +GL +E F L S ++L H+F
Sbjct: 213 AFSRARKAAKSVPAIEAAIRVISAAHEGDFA---SGLAQERAAFLALRGSSEARALRHLF 269
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
FA+R KVPG+ + R V VA++G G MG+GIA AL + PV+L E ++ A
Sbjct: 270 FAEREAGKVPGMAEA--VARHVAMVAVIGAGTMGAGIAVALADAGLPVMLVERDDTAASA 327
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
G+ RVR + +VK G++++ + + + D+ D+++EA E++++K IF
Sbjct: 328 GLSRVRDLYERQVKSGRISEADVAERLGRILPTSDWSCLAAADLIVEAAFEDMAVKADIF 387
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
L+ +LA+NTS +DL+ I T +VG HFF+PAHVM LLE+VR T+P
Sbjct: 388 RRLDAVAKSGAVLATNTSYLDLDAIAAATCRPQDVVGLHFFAPAHVMKLLEVVRGRATAP 447
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
+VI L + ++ K P+V GNC GF NR++ Y + A LVE G +D A+ +G
Sbjct: 448 EVIATALTLARRAGKQPVVAGNCDGFIGNRIYAAYRRHAEYLVEDGAAPDAVDAALEAYG 507
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE 425
MG F ++D+ G +A A + R I + E +R G T G+Y YD
Sbjct: 508 FAMGIFTVSDMSGLDIAFAMRKRRAATRDSRERYVAIPDRLCELQRLGRKTNAGWYAYDA 567
Query: 426 RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVK 485
+ S DP V + I AR+ G+ + F L +I + + NE + AEG+A++
Sbjct: 568 AGRKSVDPLVTQLIAAARAEKGI-VPRTFTAL---EIQNRLLAVMANEGAKALAEGVALR 623
Query: 486 AADLDIASVMGMGFP 500
A+D+D+ V G GFP
Sbjct: 624 ASDIDVVFVNGYGFP 638
>gi|358637346|dbj|BAL24643.1| 3-hydroxyacyl-CoA dehydrogenase [Azoarcus sp. KH32C]
Length = 672
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/501 (31%), Positives = 262/501 (52%), Gaps = 13/501 (2%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
+ PV +AH G++D + A +L+ A A D++ P TDKI + A
Sbjct: 154 SGNPVAARQAHEWGVIDRI-ADGKLLEDALAMAQDVVSGALPARRLSESTDKIRDVDPA- 211
Query: 64 EIF-KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLV 122
+F +F + ARK L P +D VEA G + E + F++ S ++L+
Sbjct: 212 -LFDEFRKKNARKWKGQLA-PWKIVDCVEAACRLSFDEGFRMEKDAFRECEHSHQSRALI 269
Query: 123 HIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKF 182
H+FFA+R K+ +D+ AP V + ++G G MG+GIA + + PV L + +E+
Sbjct: 270 HLFFAERAAGKL---SDVTAAPMPVASIGVVGAGTMGAGIAMSFANAGLPVTLLDTSEEG 326
Query: 183 LEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQ 242
L G+ + N + V +G M Q + + ++ +T D + + D+++EA+ E++++KQ
Sbjct: 327 LARGMKTITGNYATSVSRGSMPQARADAALARITATTDDAALAEADLIVEAVFEDMAIKQ 386
Query: 243 QIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQ 302
+F L+ P ILA+NTST+D++ I T + ++G HFFSPA+VM LLE+VR +
Sbjct: 387 SVFRRLDAVAKPGAILATNTSTLDVDAIAAVTSRPESVLGLHFFSPANVMRLLEVVRGPR 446
Query: 303 TSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAIT 362
T + + + +K++K +V GN GF NR+ Y + A L+E G + IDR +T
Sbjct: 447 TGAATLATAMAVARKLRKIAVVSGNAYGFIGNRILAAYGREADFLLEEGATPWQIDRVLT 506
Query: 363 KFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYL 422
+FG PMG F + D+ G V Q P S I + E R G+ T +G+YL
Sbjct: 507 EFGFPMGLFAMRDMAGLDVIWRIRQQENLTRPADERYSPIADRICEMGRFGQKTGRGYYL 566
Query: 423 YDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGI 482
YD R PDPE++ I + G+A + + +I++ + + NE + EG+
Sbjct: 567 YDGRTPI-PDPEIENLIVGVSAELGIA----RRDIPDAEILQRLLSAMANEGAHILEEGV 621
Query: 483 AVKAADLDIASVMGMGFPPYR 503
A++A D+D+ V G GFP R
Sbjct: 622 ALRAGDIDVVYVNGYGFPATR 642
>gi|390576846|ref|ZP_10256891.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
gi|389931084|gb|EIM93167.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
Length = 707
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 167/508 (32%), Positives = 261/508 (51%), Gaps = 16/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDIL-EHRRPWVATLYKTDKIEPL 59
+ML+ K + +EA +GLVD V + +++ + +L EH A + +T + L
Sbjct: 158 LMLSGKHIGEQEALKIGLVDRVGQSDDVLAEGLAYVQQLLVEH-----APVRRTRDAQAL 212
Query: 60 GEAREIFKFARAQAR---KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
+ K++ L P+ +D VEA + GL+ E + F + L S
Sbjct: 213 SDKEAATAAVTTARADTAKKSRGLLSPLKIVDCVEAALNLPFDDGLRFERKQFLECLDSP 272
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+LVH F A+R K P PR + ++GGG MG+GIA AL+ + PV +
Sbjct: 273 QRAALVHAFQAEREVQKAPETRRA--QPRPIASAGVVGGGTMGAGIAVALLDAGLPVTMI 330
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E +++ L G + + KG++T + K ++ G YE+ DVD+VIEA+ E
Sbjct: 331 ERDDESLARGRAHIEKVYDGLIAKGRLTSDAKAKKLARFIGSTSYEALADVDIVIEAVFE 390
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++++KQ +FA+L++ C +LA+NTS +D++ I ++G HFFSPAH+M LLE
Sbjct: 391 DMAVKQAVFAELDRVCKQGAVLATNTSYLDIDAIAASMSRPQDVIGLHFFSPAHIMKLLE 450
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+V S V+ D+ KK++K P+ G C GF NRM Y AA L+E G Y
Sbjct: 451 VVVPAHVSADVVATSFDLAKKLRKVPVRAGVCDGFIGNRMLAVYRAAADHLMEDGASPYQ 510
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
ID+A+ +FG PMGP+++ DL G + AT + I + E G+ T
Sbjct: 511 IDKAVREFGFPMGPYQVIDLAGGDIGWATRKRRAATRNPDARYVQIPDRLCERGWFGQKT 570
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
++GFY YDE +R +PD EV+ I R +GV P+ S++ IV ++NE
Sbjct: 571 KRGFYRYDEGKRAGTPDAEVEAIIVAERERAGVT--PR--TFSDEQIVRRYMAAMINEGA 626
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
V E IA++ D+D+ + G GFP YR
Sbjct: 627 NVIHERIALRPLDVDVTLINGFGFPAYR 654
>gi|421483297|ref|ZP_15930874.1| 3-hydroxyacyl-CoA dehydrogenase [Achromobacter piechaudii HLE]
gi|400198541|gb|EJO31500.1| 3-hydroxyacyl-CoA dehydrogenase [Achromobacter piechaudii HLE]
Length = 707
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/433 (34%), Positives = 239/433 (55%), Gaps = 7/433 (1%)
Query: 72 QARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGT 131
Q K L P +D V A + GL+ E F + L S LVH FFA+R T
Sbjct: 228 QVAKTLRGLYSPAKIVDAVRAAIEQPFDEGLRTERALFLQCLDSPQRAGLVHAFFAERET 287
Query: 132 SKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVR 191
+K+P + PRR++K+ ++GGG MG+GIA +++ + PV++ E ++ LE G RV
Sbjct: 288 AKIPELK--AARPRRLEKIGVVGGGTMGAGIAVSVLDAGLPVVMVEQDDAALERGRARVA 345
Query: 192 ANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKY 251
KKG++T ++ + ++ +G Y++ D D++IEA+ E++ +K +FA L++
Sbjct: 346 QVYDLLQKKGRITADERDARMARFSGATTYDALGDADLIIEAVFEDMDVKLAVFAQLDRV 405
Query: 252 CPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDL 311
P +LA+NTS +D+N I T ++G HFFSPA++M LLEIV TS + +
Sbjct: 406 AKPGAVLATNTSYLDVNRIASATRGPADVLGLHFFSPANIMKLLEIVVGEHTSAETVATG 465
Query: 312 LDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPF 371
++ ++++KTP+ G C GF NR+ + QAA +++E G Y ID A+ +FG PMGP+
Sbjct: 466 FELARRLRKTPVRAGVCDGFIGNRILAVHRQAADMMMEDGASPYDIDAAVREFGYPMGPY 525
Query: 372 RLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKAS 430
++ADL G + AT + I + E G+ T +GFYLY D R +
Sbjct: 526 QMADLAGGDIGWATRKRRAATRDPALRYVQIPDRLCERGWFGQKTGRGFYLYPDGARVGT 585
Query: 431 PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLD 490
PDPEV I++ R + V P + +DI ++NEA V +GIA++ +D+D
Sbjct: 586 PDPEVLAIIDEERRRASVTPRP----FTHEDIQRRYLAAMINEAANVLHQGIALRPSDVD 641
Query: 491 IASVMGMGFPPYR 503
+ + G GFP YR
Sbjct: 642 VVFLSGYGFPRYR 654
>gi|254463027|ref|ZP_05076443.1| peroxisomal bifunctional enzyme [Rhodobacterales bacterium
HTCC2083]
gi|206679616|gb|EDZ44103.1| peroxisomal bifunctional enzyme [Rhodobacteraceae bacterium
HTCC2083]
Length = 711
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 178/507 (35%), Positives = 260/507 (51%), Gaps = 21/507 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHR---RPWVATLYKTDKIE 57
M+ + + V EA LG++D V ++ + +A IL+ RP V + + + ++
Sbjct: 165 MITSGRHVSAPEALELGILDEV-EEGEVEAIGLAYAQRILDAGLGPRP-VGQMPRPEVVD 222
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
F A A K+ P I +E G AGL+ E F LL S
Sbjct: 223 --------FDTAYEAAMKRGRGQIAPATAIRSIEGACHKGIDAGLEHERNLFMALLNSPQ 274
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+ +VH FF +R SK+P + G+APR V + ++GGG MG+GIA A +LS V + E
Sbjct: 275 REGMVHAFFNERAVSKLPELK--GVAPREVSAIGVIGGGTMGAGIAVAALLSGLDVTMIE 332
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLD-YESFKDVDMVIEAIIE 236
+ +AG RV LQ VK+GK+T EKF+ ++ D YE+ D D+VIEA E
Sbjct: 333 RDADAAKAGAERVSDILQGSVKRGKLTNEKFDAIMAGRFRASDSYEALGDADLVIEAAFE 392
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +K+ IFA+L++ C +LASNTS +D+N I T ++G HFFSPAHVM LLE
Sbjct: 393 EMGVKKTIFAELDRVCKKGAVLASNTSYLDVNEIAASTSRPADVLGLHFFSPAHVMKLLE 452
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
IV T+P V+ +GK ++K + G C GF NR+ Y A +V G +
Sbjct: 453 IVVAADTAPDVVATGFALGKMMRKIAVRSGVCDGFIGNRILKTYRTCADHMVLDGASPFE 512
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
ID A+T FG MGPF +ADL G + AT + R + M E G+ T
Sbjct: 513 IDTAMTAFGFAMGPFEVADLAGLDIGWATRKRLAPTRDARERVATYADKMCEAGHFGQKT 572
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
+G+Y+Y++ +R +PD V IE R G I P+ S+ +I +VNEA
Sbjct: 573 GQGYYVYEKGKRGGTPDVNVTALIEAERRELG--ITPR--AFSQDEIQRRYMCAMVNEAA 628
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
+V EGIA + D+D+ + G GFP +
Sbjct: 629 KVVGEGIARRPLDVDMVLLFGYGFPRH 655
>gi|406832259|ref|ZP_11091853.1| multifunctional fatty acid oxidation complex subunit alpha
[Schlesneria paludicola DSM 18645]
Length = 710
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 262/511 (51%), Gaps = 22/511 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + +PV +A +GL+ V +L++ A + +D W A + + +PLG
Sbjct: 163 MITSGEPVDARKAIDIGLIYDAVPVEKLIAEA-TYLIDEAHRTGEWTA--LRQRRNQPLG 219
Query: 61 EAREIFKFA--------RAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKL 112
+ + F FA + + R Q P P+V + + G+ GL E F+++
Sbjct: 220 LSEDQFNFAFGVAEGAVKGKTRGQYP---APLVALKAIRDGINRPLEEGLVIEQAAFREV 276
Query: 113 LRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
+ +L+ FF ++ GV D + PR ++ V +LG GLMG+GIATA
Sbjct: 277 GSTTIAANLIAQFFNNTRLARESGVDDRTVQPRSIQNVGVLGAGLMGAGIATACARRGVR 336
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+ +V+ +E G+ R ++ R+ + T +S LT +SF + D+V+E
Sbjct: 337 ATMVDVDAARVELGMKNARRVVEDRIAIHRATSSDLADMLSRLTATTSRQSFSECDLVVE 396
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A+ EN LK QI + K P + ASNTSTI + + + + G HFFSP M
Sbjct: 397 AVTENEKLKTQIIEECAKVVRPDALFASNTSTISITRLAKAWPQPESFAGLHFFSPVDRM 456
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
L+E+VR +TS + +V L+ + KKI KTPIVV +C GF VNR+ PY A +L+E G
Sbjct: 457 QLVEVVRGEKTSDEAVVSLVALAKKIGKTPIVVRDCPGFLVNRILMPYMAEALVLLEEGV 516
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRA 412
D+ ID+ TK+GMP+GP L D+VG + G + +R + I+ + E R
Sbjct: 517 DMDRIDKIATKWGMPVGPITLYDMVGIDTGLYAGQVLQAGYADRAVATPILAQLVELGRL 576
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ + KGF D++ K DPEV++ I + K ++LS+ D+ + +F +
Sbjct: 577 GKKSGKGFRGVDKKGKFVADPEVQQLIAHRVT--------KKSELSDDDVADRLFLCMAL 628
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
EA R ++ IA + D+D+A ++G+ FP +R
Sbjct: 629 EAIRALSDKIARQPGDIDMAMILGVNFPAFR 659
>gi|334345738|ref|YP_004554290.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334102360|gb|AEG49784.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 687
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 237/447 (53%), Gaps = 18/447 (4%)
Query: 58 PLGEAREIF-KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P+ ++F KFA ARK L P CI + A G+ E F +L+
Sbjct: 198 PMDAEEQLFEKFAARHARK-IDTLDAPKACIAAIRAATELPFGEGVAHERSLFAELVEGA 256
Query: 117 TCKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
K+L H FFA+R +K+ + D+ L P V++V ++G G MG GIA + + V +
Sbjct: 257 QSKALCHAFFAERAAAKIDNLPADIALRP--VRRVGVIGAGTMGGGIAMNFLSTGIAVTI 314
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E + L+ G+G +RAN + V +G++ E+ E +SLLT L +E D D+VIEA+
Sbjct: 315 VETEQAALDRGVGVIRANYGASVARGRLKAEQAEAAMSLLTPTLVFEDLADCDLVIEAVY 374
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN+ +K+QIF L++ P +LASNTS +D++ I T + G HFFSPA+VM L+
Sbjct: 375 ENMEVKKQIFCRLDQVARPGAMLASNTSYLDIDEIASVTGRPQDVFGLHFFSPANVMKLV 434
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR QTS ++ + + +K+ K P+V C GF NRM P AF L+E G
Sbjct: 435 EVVRGAQTSLDIVATAMALARKVGKVPVVARVCHGFIGNRMMHPRKVEAFKLLEEGATPA 494
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
IDR FGMPMGPF++ DL G + PER + I+ + + R G+
Sbjct: 495 QIDRVHLNFGMPMGPFQMMDLAGCDIG-------WHRDPERV--TTILEALCAEGRWGQK 545
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
T GFY YD RKASP P + I R +G+ ++S+++I + +VNE
Sbjct: 546 TGGGFYDYDTERKASPSPVAQAIIADFRERAGIV----SREISDEEITVRTIYTIVNEGA 601
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
V G A +++D+D + G G+P +
Sbjct: 602 AVLEGGYAQRSSDIDAVGLYGYGWPRH 628
>gi|374371761|ref|ZP_09629692.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus basilensis OR16]
gi|373096705|gb|EHP37895.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus basilensis OR16]
Length = 602
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 174/510 (34%), Positives = 264/510 (51%), Gaps = 19/510 (3%)
Query: 5 SKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI---EPLGE 61
KP +G++A +LG+ DA++ L + A+ E VA L T + +P +
Sbjct: 65 GKPERGDKAVALGMADALIGGEPLAA-----AVAFAER----VAGLPGTHPVIARKPCAD 115
Query: 62 AREIFKFAR-AQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A + AR A +A N I VEA AGL E F +L+ K+
Sbjct: 116 AAGVDFAARIAAVSAKARNALAQRAAIACVEAATRLPIDAGLDAERGHFDQLVAGTESKA 175
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+FFA+R KV + G + R V +V ILG G MG+GIA A + V L E +
Sbjct: 176 LRHLFFAEREAPKVAALP-AGASLRTVARVGILGAGTMGAGIAMAFANAGIQVTLLEQQQ 234
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ +R N + KGK+T + + ++ +T L + D D+VIEA+ E++++
Sbjct: 235 AALDRGLAMIRRNYEITAAKGKLTAQGIAQRMACITPTLAEAALADADLVIEAVFEDMAV 294
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA L C P ILA+NTS + +++I T ++G HFFSPA+VM LLE+V+
Sbjct: 295 KEAVFARLGALCKPGAILATNTSRLSIDVIAASTSRPQDVIGLHFFSPANVMKLLEVVQG 354
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T+P+V + + + I K P++V C GF NRM PY + A L+E G +D A
Sbjct: 355 ERTAPEVTATCMKMAQAIGKIPVLVRVCEGFVGNRMLTPYWREAGFLLEEGASPQQVDGA 414
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+T+FGM MGP +ADL G + AT + P S + + E R G+ T G+
Sbjct: 415 LTRFGMAMGPLAMADLAGMDINWATRKRLAPTRPAHLRYSKVADRICEQGRFGQKTNAGY 474
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y Y+ R PDP V I + +G+ + +S+++IVE +VNE R+
Sbjct: 475 YRYEAGGRSPLPDPAVDALIRACAAEAGI----ERRDVSDEEIVERCMLALVNEGARILE 530
Query: 480 EGIAVKAADLDIASVMGMGFPPYRFVTFIH 509
EGIA +A+D+D+ V G GFP +R H
Sbjct: 531 EGIAQRASDIDVVYVHGYGFPAWRGGPMFH 560
>gi|301630327|ref|XP_002944273.1| PREDICTED: peroxisomal bifunctional enzyme-like [Xenopus (Silurana)
tropicalis]
Length = 1251
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 230/407 (56%), Gaps = 11/407 (2%)
Query: 101 GLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMG 159
G EA +F +L+ S + K+L H+FFA+R +K+ + D L P ++KV I+G G MG
Sbjct: 805 GQAVEAAEFAQLVTSPSAKALRHLFFAEREVAKISALPCDTALRP--IRKVGIVGAGTMG 862
Query: 160 SGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVL 219
GIA P ++ EVN++ L+ G+G VR N ++ KG++T E+ ++LL G L
Sbjct: 863 GGIAMNFANVGIPTVVVEVNDETLQRGLGLVRRNYEASAAKGRLTAEQVAGRMALLQGAL 922
Query: 220 DYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDR 279
DY + + D+VIEA+ EN++LKQ I A L P I+A+NTST+D++++ T
Sbjct: 923 DYAALAECDLVIEAVFENMALKQDICAKLGAVAKPGAIIATNTSTLDVDVLARATGRSAD 982
Query: 280 IVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFP 339
+VG HFFSPAHVM LLE+VR T+P V+ ++ + +I K P+V G C GF NRM
Sbjct: 983 VVGMHFFSPAHVMRLLEVVRGAATAPDVLATIMKLAARIGKVPVVSGVCYGFIGNRMAEV 1042
Query: 340 YTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENF---PER 396
Y + A L+ G + +D A+ G MGP R+ D+ G V T +++ + P+
Sbjct: 1043 YMREAEFLIMEGAEPAQVDAAVEALGFAMGPCRMLDMAGVDVGAKTVIEYGKAGGLPPDA 1102
Query: 397 TYKSMIIPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAK 456
+Y++++ + R G+ T G+Y Y R PD EV + + G+ + +
Sbjct: 1103 SYRALVQKLFAL-GRHGQKTGAGYYRYAGRTPV-PDAEVTRIATQLAEQHGIT---RRSD 1157
Query: 457 LSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ + +I E + +P++NE ++ EGIA + D+D+ G GFP +R
Sbjct: 1158 IGQDEITERLLYPLINEGWKILDEGIAYRPGDIDVVWTAGYGFPDFR 1204
>gi|152995606|ref|YP_001340441.1| multifunctional fatty acid oxidation complex subunit alpha
[Marinomonas sp. MWYL1]
gi|150836530|gb|ABR70506.1| fatty oxidation complex, alpha subunit FadB [Marinomonas sp. MWYL1]
Length = 716
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 164/503 (32%), Positives = 256/503 (50%), Gaps = 19/503 (3%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVA---TLYKTDKIEPLGEAREI 65
+ E+A G VDAVV ++ +AR +L+ + + A L + P+ E +
Sbjct: 175 RSEDAFKDGAVDAVVPAAKVNESARHLIQQVLDGKLNYHARRDELRAPMEFTPI-EKMMV 233
Query: 66 FKFAR----AQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSL 121
F+ R A+A K P P+ I +E G+ L E + F KL + KSL
Sbjct: 234 FESVRGVVGAKAGKHYP---APMAAIKTIEKGISQDMEKALDTEIKGFIKLAKGPVAKSL 290
Query: 122 VHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEK 181
V++F + + K G P VK+ A+LG G+MG G+A P+I+K++ +
Sbjct: 291 VNLFLSDQQIKKTAGRYAKNATP--VKQAAVLGAGIMGGGVAYQSASKGTPIIMKDIRPE 348
Query: 182 FLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLK 241
LE G+ +V++G++T EK K ++ + L Y F+ VD+V+EA++ENV +K
Sbjct: 349 ALELGLSEANKLFNGQVERGRLTTEKAFKAMNAIIPALSYGEFEHVDLVVEAVVENVKIK 408
Query: 242 QQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTN 301
+ + A++E IL SNTSTI + + + + G HFF+P H MPL+E++R
Sbjct: 409 KSVLAEVETKISDDAILTSNTSTISITELAKDLKRPENFCGMHFFNPVHRMPLVEVIRGE 468
Query: 302 QTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAI 361
+TS I + + + KTP+VV +C GF VNR+ FPY L+++ G D ++D+ +
Sbjct: 469 KTSDAAIAKTVAYAQAMGKTPVVVNDCPGFLVNRVLFPYFAGFSLMMQEGADFQVVDKTM 528
Query: 362 TKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK--SMIIPIMQEDKRAGETTRKG 419
KFG PMGP L D+VG A E FP+R + + + E +R G+ KG
Sbjct: 529 EKFGWPMGPAYLLDVVGIDTAYHADQVMAEGFPDRMKHEGTNAVDCLFELERFGQKNGKG 588
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
FY Y+ RK P KK + + +I ++LSE DIV + P+ E R
Sbjct: 589 FYTYEPDRKGKP----KKIFNEEIDVLLSSIVVSKSELSEDDIVARMMIPLCIETVRCLE 644
Query: 480 EGIAVKAADLDIASVMGMGFPPY 502
E I AA+ D+ + G+GFPPY
Sbjct: 645 ENIVASAAEADMGLIYGIGFPPY 667
>gi|226228262|ref|YP_002762368.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Gemmatimonas
aurantiaca T-27]
gi|226091453|dbj|BAH39898.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Gemmatimonas
aurantiaca T-27]
Length = 737
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 175/512 (34%), Positives = 270/512 (52%), Gaps = 21/512 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDI-------LEHRRPWVATLYKT 53
++LT K V+ +A +GLV +V P L+ A Q A + + RRP + + +
Sbjct: 190 LILTGKNVRARKALPMGLVHELVHPAILLDVAMQRARQLAHGDRSAVRERRPGL--VERA 247
Query: 54 DKIEPLGEAREIFKFARAQ-ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKL 112
+ +G A IF+ AR +K + P +DV+E G AGL +EA+ F +L
Sbjct: 248 LEENSVGRA-IIFRKARESVTKKTGGHYPAPFAALDVIERGYRESFAAGLLEEAKRFGEL 306
Query: 113 LRSETCKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNY 171
S C+ L ++FFA K G+ +APR V K+ +LG G MG+GI + +
Sbjct: 307 AVSPECRQLAYLFFATTSLKKDTGLPAGQNVAPRAVHKLGVLGAGFMGAGITAVAVQAGT 366
Query: 172 PVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVI 231
V LK+ + L +G VR ++ R+ K ++T+ +F+ T+SL+ G +DY F +VD+VI
Sbjct: 367 VVRLKDGTVERLASGFKAVRDVVRERLVKRQITRVQFDDTMSLVGGTVDYRGFANVDLVI 426
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHV 291
EA+ E++ +K Q+ ++E+ P I ASNTSTI + I ++++G HFFSP H
Sbjct: 427 EAVFEDLDVKHQVLREVEETTPA-AIFASNTSTIPIRDIARAAKRPEQVLGMHFFSPVHR 485
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
MPLLE++ T +TS + + GK++ KT IVV + GF VNR+ PY +V+ G
Sbjct: 486 MPLLEVIVTPETSAETTATAVAYGKQLGKTVIVVQDGAGFYVNRILAPYLNECGRMVDEG 545
Query: 352 TDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKR 411
+ ID+A+ +FG P+GPF L D VG +A +G F R S + + R
Sbjct: 546 ASIEDIDKALVQFGFPVGPFTLLDEVGLDIAGKSGPIMEAAFGPRMQPSATLRAVIASGR 605
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G RKGFY YD D + + + +M+ V + L ++I + P++
Sbjct: 606 LGRKARKGFYRYDA------DGKRQGVDDSIYAMTPVGARRR--TLPVEEIQQRAVLPLL 657
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NEA R EGI D DI +V G+GFPP+R
Sbjct: 658 NEAVRCLDEGIIRSPRDGDIGAVFGIGFPPFR 689
>gi|170734224|ref|YP_001766171.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia MC0-3]
gi|169817466|gb|ACA92049.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
cenocepacia MC0-3]
Length = 708
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 259/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + EEA +LGLVD + + ++ +A +++ P V +
Sbjct: 159 LMLTGRHASAEEALALGLVDRIAHSDDTLAEGLAYAQELVSLGAP-VRRTRDAQGLADRA 217
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ ARA+ K++ L P +D VEA + AG++ E F + L S
Sbjct: 218 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALTQSFDAGMKLERNLFLQCLDSPQRAG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R +K P +PR V+++ ++GGG MG+GIA A + + PV + E +E
Sbjct: 278 LVHAFFAEREAAKAPEARRA--SPRPVERIGVVGGGTMGAGIAVAALDAGLPVTMIERDE 335
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G V V KG+MT ++ G Y++ D+VIEA+ E++++
Sbjct: 336 ASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQADVVIEAVFEDMAV 395
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA+VM LLEIV
Sbjct: 396 KQAVFAELARVCKPGAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEIVVP 455
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ SP V+ + K++KKTP+ G C GF NR+ Y AA L+E G Y IDRA
Sbjct: 456 ARVSPDVVATAFALAKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 515
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG PMGPF++ DL G + AT + I + E G+ T +G+
Sbjct: 516 VRGFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPNARYVEISDRLCERGWFGQKTGRGY 575
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV + + R+ G I P+ ++ +I+ ++NE V
Sbjct: 576 YLYPDGARVGTPDPEVGAIVAEERAKKG--ITPR--TFTDDEILRRYLAAMINEGANVVH 631
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP YR
Sbjct: 632 EKIALRPLDVDAVFLYGYGFPRYR 655
>gi|410446988|ref|ZP_11301090.1| enoyl-CoA hydratase/isomerase family protein [SAR86 cluster
bacterium SAR86E]
gi|409979975|gb|EKO36727.1| enoyl-CoA hydratase/isomerase family protein [SAR86 cluster
bacterium SAR86E]
Length = 719
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 175/513 (34%), Positives = 275/513 (53%), Gaps = 28/513 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALD-ILEHRRPWVATLYKTDKIEPL 59
MM+ P+ ++A G++DA+ + N L+ + D I P V DK E L
Sbjct: 156 MMIAGTPISAKKALQQGVIDAI-SENSLIEDGIAFLQDKITLSEHPKV-----RDKNEKL 209
Query: 60 GEAR---EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGP-RAGLQKEAEDFQKLLRS 115
EAR I A+A A K P I VEA + G++KE+E F + L
Sbjct: 210 LEARGADNILAEAKALAAKTRRGQFAPGQIISCVEAAINEDDFDIGMKKESEYFLECLVH 269
Query: 116 ETCKSLVHIFFAQRGTSKV---PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++++HIFF +R SK+ P T L ++ ++G G MG GIA + P
Sbjct: 270 PQREAMIHIFFGERAASKISDIPKETPL----HQINSAGVVGSGTMGGGIAMNFANAGIP 325
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
V++ + +EK L G+G + N Q V +G+M+Q++ + + ++T L YE DVD+V+E
Sbjct: 326 VLILDQDEKNLSRGMGVIEKNYQMMVDRGRMSQDQKDTVMQIITPTLSYEDLADVDIVVE 385
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A+ EN+ LKQ+IF L+ ILASNTS +D++ I T +++VG HFFSPA+VM
Sbjct: 386 AVYENLELKQEIFKSLDTAVNDQAILASNTSGLDIDAIASSTNRPNKVVGTHFFSPANVM 445
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
LLE+VR +++S + + ++ +GKK+ K +V N GF NRM + YT A +L+ G
Sbjct: 446 RLLEVVRGSKSSDETMATVMALGKKMGKASVVSLNAPGFIGNRMLYGYTYQANMLLLEGA 505
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAI-ATGMQFIENFPERTYKSMIIPIMQEDKR 411
ID A+ FGM MGPFR+ DLVG + A + IE + I + E R
Sbjct: 506 LPNQIDSALESFGMSMGPFRMMDLVGLDLGWRARKLGGIET----PLTNKISDALCEQDR 561
Query: 412 AGETTRKGFYLYDERRKA-SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
G+ KGFY Y E +A +P PE + ++ + + + ++S+++I++ F +
Sbjct: 562 FGQKNSKGFYNYSEGSRAPNPAPENESIYKEVSEKNNI----QRREISDQEIIDRCIFAL 617
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
VNE ++ EG++ +A D+DI + G GFP +R
Sbjct: 618 VNEGAKILEEGVSQRAGDMDIVYINGYGFPIWR 650
>gi|91784409|ref|YP_559615.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia xenovorans LB400]
gi|91688363|gb|ABE31563.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
Length = 706
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 266/507 (52%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++L+ + +EA +LGL+D + + +++ + ++L P T D + P G
Sbjct: 157 LILSGRHASAKEALALGLIDRLGSSGDILAEGLAYVHELLAAHAPVRRT---RDAVAP-G 212
Query: 61 E---AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ + ARA+ K++ L P+ +D VEA + GL+ E + F + L S
Sbjct: 213 DRAASLAAVTAARAETAKKSRGLFSPLKIVDAVEAAIEQPFDEGLRLERKLFLECLDSPQ 272
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L+H FFA+R K P D PR + + ++GGG MG+GIA A++ + PV + E
Sbjct: 273 RAGLIHAFFAEREVLKAPETRDA--KPRALNAIGVVGGGTMGAGIAVAVLDAGLPVTMIE 330
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ L G+ + + +G+M+ EK ++ G Y++ D D+VIEA+ E+
Sbjct: 331 RDDASLARGLAHIEKVYDGLIARGRMSAEKKAAVMTRWNGSTSYDALTDADLVIEAVFED 390
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++KQ +FA+L++ C +LA+NTS +D++ I ++G HFFSPA++M LLE+
Sbjct: 391 LAVKQAVFAELDRVCKAGAVLATNTSYLDIDAIAASISRPADVIGLHFFSPANIMKLLEV 450
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + S V+ ++ KK++KTP+ G C GF NR+ Y AA ++E G Y I
Sbjct: 451 VVPKRVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRVLAVYRAAADAMMEDGASPYQI 510
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ FG PMGPF++ DL G + A + I + E G+ T
Sbjct: 511 DAAVRAFGFPMGPFQVVDLAGGDIGWAARKRRAATRNPAARYVQIADRLCERGWFGQKTG 570
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+GFYLY E R +PDPEV+ I+ R+ +G I P+ ++ +I+ ++NE
Sbjct: 571 RGFYLYPEGSRSGTPDPEVEAIIDAERARAG--ITPR--SFTDDEIIRRYMAAMINEGAN 626
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V E IA++ D+D+ + G GFP YR
Sbjct: 627 VVHERIALRPLDVDVTLLYGYGFPRYR 653
>gi|196001669|ref|XP_002110702.1| hypothetical protein TRIADDRAFT_63801 [Trichoplax adhaerens]
gi|190586653|gb|EDV26706.1| hypothetical protein TRIADDRAFT_63801 [Trichoplax adhaerens]
Length = 689
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/475 (34%), Positives = 261/475 (54%), Gaps = 36/475 (7%)
Query: 54 DKI--EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQK 111
DKI EPL ++ FA+A A K + I C+ V G++KE + +
Sbjct: 164 DKIVDEPLLDS--AIDFAKAIADKPVADRMECIKCVSYS----VLPYEEGMKKEEQSMKV 217
Query: 112 LLRSETCKSLVHIFFAQRGTSK--VPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILS 169
L+ S ++L + FFAQR K + GV + P VK V I+G G MG+GIA AL+ S
Sbjct: 218 LMASYQARALQYSFFAQRSAPKWSLSGVNSKNVKPIPVKTVGIIGAGTMGTGIAIALMTS 277
Query: 170 NYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDM 229
Y V+L EV +++L+ G+ +++ L+ VK+G+MT+++ + +L+ L Y+ DVD
Sbjct: 278 KYRVVLLEVKKEYLDRGMKMIQSTLERNVKRGRMTKQQAKACSALVKPTLAYKDLSDVDF 337
Query: 230 VIEAIIENVSLKQQIFADLEKYCP----------PHCILASNTSTIDLNLIGERTYSKDR 279
VIEA+ E + +K+++F L K+C + IL SNTS +D++ I S D+
Sbjct: 338 VIEAVFEALEIKKEVFRKLVKHCKVDIDANKFLQSNAILCSNTSYLDIDKIASVVPSPDK 397
Query: 280 IVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFP 339
++G HFF+PA++M L+E ++ +TS + I ++++ ++KK P++VGNC GF NRM P
Sbjct: 398 VMGMHFFAPANIMKLVECIKGTKTSAETIATVMNLSLRMKKIPVLVGNCDGFVANRMLAP 457
Query: 340 YTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVA----IATGMQF-----I 390
Y + A +VE G + ID + +GMPMGP R+ DL G + + G+
Sbjct: 458 YAKEATFMVEEGALPHQIDDTLYDYGMPMGPLRVGDLSGLDIGYRDRVGKGLTGPNAPKF 517
Query: 391 EN--FPERTYKSMIIPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGV 448
EN + S++ I+ + R G+ T KG+Y Y E+ KA DP V + IEK + G
Sbjct: 518 ENPLLRQGQRYSLLGDILHDTGRLGQKTGKGWYKY-EKGKAVVDPLVTEMIEKYCNEYGF 576
Query: 449 AIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ ++ +IVE F NE ++ EGIA+K +D+D+ G GFP ++
Sbjct: 577 S----RRNITNAEIVERCFLSAANEGFKILEEGIALKPSDIDVIWQFGFGFPRHK 627
>gi|294010130|ref|YP_003543590.1| 3,2-trans-enoyl-CoA isomerase [Sphingobium japonicum UT26S]
gi|292673460|dbj|BAI94978.1| 3,2-trans-enoyl-CoA isomerase [Sphingobium japonicum UT26S]
Length = 705
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 244/447 (54%), Gaps = 8/447 (1%)
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
EIF ARA+ I VEA V AG++ E F++L+ ++ K+L H
Sbjct: 211 EIFDAARARLSGSGERYPALPEIIAAVEAATVLDFAAGMEVEKAAFKRLIETDVSKALRH 270
Query: 124 IFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKF 182
F A+R S V + D+G+ RR+ A++G GLMG+GIA L + V L E +E+
Sbjct: 271 GFLAERRASHVREIGADVGV--RRLDTAAVIGAGLMGTGIAQCLAAAGIEVTLLETSEQA 328
Query: 183 LEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQ 242
V L V KG++T ++ E +L+ DY ++VD+ IEA+ E++ K+
Sbjct: 329 TVRSEKSVDDVLGRAVAKGRLTAKQAEAQKALIRWTTDYGDLRNVDIAIEAVFESLEAKR 388
Query: 243 QIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQ 302
+F +L++ P ILASNTST+DLN I T +VG HFFSPA+VM LLE+VR ++
Sbjct: 389 AVFEELDRNLRPGAILASNTSTLDLNAIAAFTQRPADVVGTHFFSPANVMRLLEVVRGDR 448
Query: 303 TSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAIT 362
T+P V+ + G++I K ++ G C GF NRM Y + A LVE G + +D A+
Sbjct: 449 TAPDVVKTAMQFGRRIGKVSVLSGVCDGFIGNRMVEEYFRQAMFLVEEGALPFEVDEALE 508
Query: 363 KFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYL 422
+FG MGPF++ADL G + + + + P+ Y S ++ + E R G+ T+ G YL
Sbjct: 509 EFGFSMGPFKVADLAGLDIGWSIRKRRAQERPDMPY-SPVLDGLCEQGRFGQKTKAGVYL 567
Query: 423 YDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGI 482
Y + R A DPEV++ I +A ++S+ +IV+ +VNE ++ EGI
Sbjct: 568 YADGRTAVRDPEVERSIAAFSQSQNIA----RREISKSEIVDRCVLALVNEGAKILEEGI 623
Query: 483 AVKAADLDIASVMGMGFPPYRFVTFIH 509
A +A+D+D+ + G GFP +R H
Sbjct: 624 AQRASDIDVVYLAGYGFPDFRGGPMFH 650
>gi|206559114|ref|YP_002229874.1| putative trifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase [Burkholderia
cenocepacia J2315]
gi|444370153|ref|ZP_21169838.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia K56-2Valvano]
gi|198035151|emb|CAR51025.1| putative trifunctional protein [includes: enoyl-CoA hydratase;
3,2-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA
dehydrogenase] [Burkholderia cenocepacia J2315]
gi|443597878|gb|ELT66281.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia K56-2Valvano]
Length = 707
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 265/507 (52%), Gaps = 15/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + EEA +LGLVD V + ++ +A +++ P + +T + L
Sbjct: 159 LMLTGRHASAEEALALGLVDRVAHSDDTLAEGLAYAQELVSLGAP----VRRTRDAQGLA 214
Query: 61 E---AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ A+ ARA+ K++ L P +D VEA + AG++ E F + L S
Sbjct: 215 DRTAAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALTQSFDAGMKFERSLFLQCLDSPQ 274
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
LVH FFA+R +K P P V+++ ++GGG MG+GIA A + + PV + E
Sbjct: 275 RAGLVHAFFAEREAAKAPEARRASARP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIE 332
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+E L G V V KG+MT ++ G Y++ VD+VIEA+ E+
Sbjct: 333 RDEASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQVDVVIEAVFED 392
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++KQ +FA+L + C P +LA+NTS +D++ + D ++G HFFSPA+VM LLEI
Sbjct: 393 MAVKQAVFAELARVCKPGAVLATNTSYLDIDALASIDRPAD-VIGLHFFSPANVMKLLEI 451
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + SP V+ + +++KKTP+ G C GF NR+ Y AA L+E G Y I
Sbjct: 452 VVPARVSPDVVATAFALARQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQI 511
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+ +FG PMGPF++ DL G + AT + I + E G+ T
Sbjct: 512 DRAVREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPNARYVEISDRLCERGWFGQKTG 571
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+G+YLY D R +PDPEV+ + + R+ G I P+ ++ +I+ ++NE
Sbjct: 572 RGYYLYPDGARVGTPDPEVEAIVAEERAKKG--ITPR--TFTDDEILRRYLAAMINEGAN 627
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V E IA++ D+D + G GFP YR
Sbjct: 628 VVHEKIALRPLDVDAVFLHGYGFPRYR 654
>gi|345317598|ref|XP_001512869.2| PREDICTED: peroxisomal bifunctional enzyme [Ornithorhynchus
anatinus]
Length = 704
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 259/521 (49%), Gaps = 31/521 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
M+ + + + EA LGL+D VV + + + A Q + E RR ++
Sbjct: 132 MITSGRHLLAPEALKLGLLDQVVNSDTVEAAIKFAEQISGQPTESRR------IMNKQVP 185
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + RKQ P C+ V+A V G++KE + FQ L S
Sbjct: 186 ELPNMDSIFSEAYLKMRKQFPGCISREACVRAVQAAVQYPYPLGIEKEKDLFQYLHTSGQ 245
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
K+L ++FFAQR +K G + + + ++ A++G G MG GI +L +N PVI
Sbjct: 246 AKALQYLFFAQRICNKWSTSSGASWKNSSAQPIRSAAVIGLGTMGRGIVVSLARANIPVI 305
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
E +EK LE V L+ K + + + + T + E +VD+VIEA+
Sbjct: 306 AVEQDEKQLELASRMVSFLLELEASKMQKSGQSWAAPKPRFT--MSLEELGEVDLVIEAV 363
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E + LK+Q+F+ L C P L +NTS ++++ I T R++G HFFSPAHVM L
Sbjct: 364 FEEIGLKKQVFSKLSAICKPEAFLCTNTSALNIDEIASSTRHPQRVIGTHFFSPAHVMTL 423
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ ++SP I ++ + K +KK +VVGNC GF NRM FPY Q + L+E G+
Sbjct: 424 LEVIPGRRSSPTTIATVMSLAKTMKKVGVVVGNCFGFVGNRMLFPYVQQTYFLLEEGSQP 483
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPERTY-KSMIIPI- 405
+DR + +FG MGPFR++DL G + TG P R + PI
Sbjct: 484 EEVDRVLEEFGFKMGPFRVSDLAGLDIGWKSRQGQGLTGPTLAPGTPARQRGRKRYCPIP 543
Query: 406 --MQEDKRAGETTRKGFYLYDE--RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
+ E R G+ T KG+Y YD R PDP + KF+ + R + P +S+ +
Sbjct: 544 DMLCEQGRFGQKTGKGWYRYDRPMGRIHKPDPWLSKFLSEYRKTHHIETRP----ISQDE 599
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
I+E + ++NE R+ EGIA +D + G G+P +
Sbjct: 600 ILERCLYALINEGFRILGEGIAAGPEHVDCIYINGFGWPKH 640
>gi|341613565|ref|ZP_08700434.1| fatty oxidation complex, alpha subunit [Citromicrobium sp. JLT1363]
Length = 678
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 165/505 (32%), Positives = 262/505 (51%), Gaps = 23/505 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ P+ ++A +GL+D +V + L + A +A + P + + D +
Sbjct: 152 LVAIGNPISAKKAKEIGLLDELVGEDSLAADAIAFAKSKIGQPVPRSS---EGDANQDGI 208
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ +IF RA+ ++ P I+ V+A G++KE E F KL+ K+
Sbjct: 209 KNPDIFDEFRAKNGRKMRGFDAPNAAIEAVKAAGELSYAEGVKKERELFGKLMTGTQSKA 268
Query: 121 LVHIFFAQRGTSKV---PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+ H FFA+R +KV P T L +KKV I+G G MG GIA + + PV + E
Sbjct: 269 MRHYFFAERAANKVDDIPADTPL----IDIKKVGIIGAGTMGGGIAMNFLSAGIPVTILE 324
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ ++ L+ G +R N ++ KKG+MT E+ E+ + LLT L+Y D D+VIEA+ E+
Sbjct: 325 MKQEALDRGTATMRKNYEATAKKGRMTAEQVEQAMGLLTPTLEYSDLADCDLVIEAVYES 384
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ +F L++ ILASNTS +D+N I T ++G HFFSPA+VM LLE+
Sbjct: 385 MDVKKDVFGKLDEVVKDGAILASNTSYLDINEIATATKRPGYVLGLHFFSPANVMKLLEV 444
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR +T V+ + + KKI K V G C GF NRM + A L+ G + + +
Sbjct: 445 VRGEKTRDDVLATAMKLSKKIGKVAAVSGVCPGFIGNRMLSKRQEQANQLILEGANYWDV 504
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D + FG PMGPF++ DL G + P + + I + R G+
Sbjct: 505 DDVLLDFGFPMGPFQMGDLAGIDIG-------WHRDPSKV--TTIREALCAVGRFGQKAG 555
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
KGFY YDE R+ +P EVK+ I G + +S+ +I E + +P+VNE ++
Sbjct: 556 KGFYDYDEARQRTPSDEVKQIIADFAEKEG----NEQRDISKDEIRERLLYPMVNEGAKI 611
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EG+A +A+D+D+ + G G+P Y
Sbjct: 612 LDEGMAQRASDIDVVWINGYGWPLY 636
>gi|387814500|ref|YP_005429986.1| bifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381339516|emb|CCG95563.1| bifunctional enzyme (PBE) (PBFE) [Includes: Enoyl-CoA hydratase ;
3,2-trans-enoyl-CoA isomerase ; 3-hydroxyacyl-CoA
dehydrogenase ] [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 699
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 262/507 (51%), Gaps = 15/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+M + + V E+A LGL+D V+ + L A +A D L + D P+
Sbjct: 149 LMTSGEKVPAEQARELGLIDRVLEGD-LREGALNYARDCLAG---GLGVRRIRDMQIPVD 204
Query: 61 EA-REIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
++ R Q K+ P +D VE + GL E F + +S+
Sbjct: 205 SGDQQTLDAYRNQLAKRKRGQEAPQRIVDCVEIALNRPFDEGLAFERSQFVECTQSDQSA 264
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+L H+FFA+R KVP + D R + +V I+G G MG GIA A + PV+L E+N
Sbjct: 265 ALRHLFFAERKALKVPDL-DPEAHARDISRVGIIGAGTMGGGIAMAFANAGIPVMLLELN 323
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+ + N V +GK++ + +L+TG ++YE VD+VIEA+ E++
Sbjct: 324 QEGLDRGLTLISENYGRSVSRGKLSTSEAASRKALITGSINYEDLAKVDLVIEAVFESMD 383
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L++ C P ILA+NTS +D+N I T +VG HFFSPA++M LLE+VR
Sbjct: 384 VKKQVFQRLDEVCRPGTILATNTSYLDVNEIASATSRPGDVVGLHFFSPANIMKLLEVVR 443
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT+ VI + +GK+++K P++ C GF NRM Y + A L + G ID
Sbjct: 444 AEQTADDVIATAMALGKRLRKVPVLSRVCYGFIGNRMLRQYAKEAQLCMIEGATPEQIDG 503
Query: 360 AITKFGMPMGPFRLADLVGF--GVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
A+T FGM MGP + DL G G + + RTY I + E R G+ T
Sbjct: 504 ALTDFGMAMGPLAVGDLAGLDIGYKARQALTSEQKGDPRTY--CIADALVESGRLGQKTG 561
Query: 418 KGFYLYD-ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y YD + R DP+V + I++ S GV+ ++++I + +VNE R
Sbjct: 562 AGYYRYDPDTRARYSDPQVSEVIKREASRYGVSQ----RLFTKEEIQDRHILSLVNEGFR 617
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA + D+D+ V G GFP YR
Sbjct: 618 ILEEGIAQRPGDIDLVYVHGYGFPSYR 644
>gi|421870892|ref|ZP_16302521.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
cenocepacia H111]
gi|358069221|emb|CCE53399.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
cenocepacia H111]
Length = 720
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 171/507 (33%), Positives = 262/507 (51%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + EEA +LGLVD V + ++ +A +++ P + +T L
Sbjct: 171 LMLTGRHASAEEALALGLVDRVAHSDDTLAEGLAYAQELVSLGAP----VRRTRDAHGLA 226
Query: 61 E---AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ A+ ARA+ K++ L P +D VEA + AG++ E F + L S
Sbjct: 227 DRTAAQAAIDAARAELPKRSRGLFSPAKIVDAVEAALTQSFDAGMKFERSLFLQCLDSPQ 286
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
LVH FFA+R +K P P V+++ ++GGG MG+GIA A + + PV + E
Sbjct: 287 RAGLVHAFFAEREAAKAPEARRASARP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIE 344
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+E L G V V KG+MT ++ G Y++ VD+VIEA+ E+
Sbjct: 345 RDEASLTRGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQVDVVIEAVFED 404
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++KQ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA+VM LLEI
Sbjct: 405 MAVKQAVFAELARVCKPGAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEI 464
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + SP V+ + +++KKTP+ G C GF NR+ Y AA L+E G Y I
Sbjct: 465 VVPARVSPDVVATAFALARQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQI 524
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+ +FG PMGPF++ DL G + AT + I + E G+ T
Sbjct: 525 DRAVREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPNARYVEISDRLCERGWFGQKTG 584
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+G+YLY D R +PDPEV + + R+ G I P+ ++ +I+ ++NE
Sbjct: 585 RGYYLYLDGARVGTPDPEVDAIVAEERAKKG--ITPR--TFTDDEILRRYLAAMINEGAN 640
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V E IA++ D+D + G GFP YR
Sbjct: 641 VVHEKIALRPLDVDAVFLHGYGFPRYR 667
>gi|327309822|ref|YP_004336720.1| 3-hydroxybutyryl-CoA epimerase [Pseudonocardia dioxanivorans
CB1190]
gi|326955157|gb|AEA28853.1| 3-hydroxybutyryl-CoA epimerase [Pseudonocardia dioxanivorans
CB1190]
Length = 703
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 261/498 (52%), Gaps = 14/498 (2%)
Query: 8 VKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFK 67
V A LG++DA V + L AL L+ + D + P F
Sbjct: 170 VPAPRAAELGMIDACVDDDVL-----DAALAYLDDT-GVAGAQPRLDDLPPPAAGDADFA 223
Query: 68 FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFA 127
AR + R N + ID VEA GL E F +LL S K+L H FFA
Sbjct: 224 AARRRVRPSTRNGVAQLAAIDCVEAATQLPIEEGLPLERASFLRLLESTEAKALRHTFFA 283
Query: 128 QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGI 187
++ +KV + D + PR V+++A++G G MG+GIA A S V L E + LE GI
Sbjct: 284 EKQAAKVLDI-DRSVQPRPVERIAVIGAGTMGTGIAMAFANSGLAVDLIEQDRAALERGI 342
Query: 188 GRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFAD 247
V+ N ++ K ++ + E+ ++L+T LD + D+V+EA+ E++++K+ +FA
Sbjct: 343 ELVQRNYEATAAKRRLDAVQVEQRLALITPSLDLDVVAQADLVVEAVFEDMAVKKDVFAK 402
Query: 248 LEKYCPPHCILASNTSTIDLNLIGERTYSKDR-IVGAHFFSPAHVMPLLEIVRTNQTSPQ 306
L+ P +LASNTS +D++ + R+ S+ R ++G HFFSPAHVM LLE+VR T+
Sbjct: 403 LDAIAKPGAVLASNTSRLDIDELA-RSVSRPRDVIGLHFFSPAHVMKLLEVVRGESTADD 461
Query: 307 VIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGM 366
VI + + + I K P++ C GF NRM PY + A L+E G +DRA+ FG+
Sbjct: 462 VIATSMAVARLINKVPVLSKVCEGFIGNRMLTPYRREADFLLEEGMTPERVDRALETFGL 521
Query: 367 PMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DE 425
MGPFR++DL G + A + S + ++ E R G+ T G+Y Y ++
Sbjct: 522 AMGPFRMSDLAGLDIGWAARKRLAPTRDTSLRYSRVADVLCEAGRFGQKTGAGYYRYAED 581
Query: 426 RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVK 485
RK DP V++ I + GV + ++++ +IV+ +VNE R+ +G+A +
Sbjct: 582 SRKPVADPVVEQIIRQCAEEDGV----ERREITDAEIVDRCMLALVNEGARILGDGVAQR 637
Query: 486 AADLDIASVMGMGFPPYR 503
A+D+D+ + G GFP YR
Sbjct: 638 ASDIDVVYIDGYGFPAYR 655
>gi|209516658|ref|ZP_03265511.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
gi|209502933|gb|EEA02936.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
Length = 706
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 161/504 (31%), Positives = 259/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++L+ + +EA + G++D + +++ + ++L P T T +
Sbjct: 157 LILSGRHASAKEALAFGMIDRLGDSGDILAEGLAYVHELLAAHAPVRRTREAT-ALTDRA 215
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ AR + K+A L P+ +D VEA + GL+ E + F + L S
Sbjct: 216 ASLAAVATAREETAKKARGLFSPLKIVDAVEAAIEQPFDEGLKLERKLFLQCLDSPQRAG 275
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FFA+R K P D PR + + ++GGG MG+GIA A++ + PV + E +E
Sbjct: 276 LIHAFFAEREVLKAPETRDA--KPRALDAIGVVGGGTMGAGIAVAVLDAGLPVTMIERDE 333
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G + + KG++T E+ ++ +G Y++ VD+VIEA+ E++ +
Sbjct: 334 ASLARGRAHIDKVYDGLIAKGRLTAERKAAIMAGWSGSTSYDALAHVDLVIEAVFEDLDV 393
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F +L++ C P +LA+NTS +D++ I ++G HFFSPA++M LLE+V
Sbjct: 394 KKAVFVELDRVCKPGAVLATNTSYLDIDAIAASVSRPADVIGLHFFSPANLMKLLEVVVP 453
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
Q S V+ ++ KK++KTP+ G C GF NR+ Y AA L E G Y ID A
Sbjct: 454 KQVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRLLAVYRAAADALTEDGASPYQIDAA 513
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG PMGPF++ DL G + A + I + E G+ T +GF
Sbjct: 514 VRAFGFPMGPFQVVDLAGGDIGWAARKRRAATRNPNARYVQIADRLCERGWFGQKTGRGF 573
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY E R +PDPEV+ I+ R +G I P+ S+++I+ ++NE V
Sbjct: 574 YLYPEGSRGGTPDPEVEAIIDAERKRAG--ITPR--SFSDEEIMRRYMAAMINEGANVVH 629
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D+ + G GFP YR
Sbjct: 630 EGIALRPLDVDVTLLYGYGFPRYR 653
>gi|410647349|ref|ZP_11357783.1| peroxisomal bifunctional enzyme [Glaciecola agarilytica NO2]
gi|410133052|dbj|GAC06182.1| peroxisomal bifunctional enzyme [Glaciecola agarilytica NO2]
Length = 656
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 261/491 (53%), Gaps = 18/491 (3%)
Query: 17 GLVDAVVAPNQLVST---ARQWALDILEHRRPWVATLYKTDKIEPLGEARE-IFKFARAQ 72
G+VD +V+ + ++ T A+Q AL ++P +AT K +GEA + IF RA+
Sbjct: 131 GIVDKIVSDDLVLKTIEFAQQVAL-----KQPVIATPLLNVK---MGEAEDTIFAQYRAK 182
Query: 73 ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTS 132
K+A P ID +E + GL+KE E F S ++ H FFA++
Sbjct: 183 LAKRARGQQAPQSAIDSIENALNLPFNQGLKKEREYFLSCRESTESAAMRHAFFAEKAAV 242
Query: 133 KVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRA 192
K P + + P ++++AI+G G MG GIA + + YPVIL E +E+ L G +
Sbjct: 243 KYPATLN-KIEPLHIEQIAIIGAGTMGGGIAMSFLDRGYPVILVETSEENLARGTSGITE 301
Query: 193 NLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYC 252
+ V +++QE+ + + ++ Y+ DVD+VIEA E++ +K++IF L+ C
Sbjct: 302 RYKKMVLSKRISQEQMDIRLKMMKATCCYDDLHDVDLVIEAAFESMEVKREIFRKLDAVC 361
Query: 253 PPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLL 312
P ILASNTS +D+ I E T ++++G HFFSPA++M LLEIVR +TS ++ +
Sbjct: 362 KPQTILASNTSYLDIEEIAESTARPEKVLGMHFFSPANIMKLLEIVRCKETSETTLISAV 421
Query: 313 DIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFR 372
+ K I K VVG C GF NRM+ Y + A L+ G ID+A+ +GM MGP
Sbjct: 422 ALAKHIGKISSVVGMCYGFVGNRMYSCYGREANSLLLEGATPSQIDQAMVDWGMAMGPLA 481
Query: 373 LADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDERRKASPD 432
+ D+ G +A + N + +M E R G+ T+KGFY YDE S D
Sbjct: 482 VNDMSGIDIAY-NARKENPNLSKNPLYFHAANLMVEAGRLGQKTQKGFYQYDEAGVKSED 540
Query: 433 PEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIA 492
P ++ + G+ P+ ++S+ I E + + ++NE ++ E IA +A+D+D+
Sbjct: 541 PAALAIFQQEAKLHGI---PQ-QEISQAHIQERLIYALINEGAKILEESIAKQASDIDVI 596
Query: 493 SVMGMGFPPYR 503
+ G GFP YR
Sbjct: 597 WLNGYGFPRYR 607
>gi|119478556|ref|ZP_01618499.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2143]
gi|119448460|gb|EAW29709.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2143]
Length = 699
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 265/506 (52%), Gaps = 13/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + PV +AHS+GLVD ++ + L+ A +A ++ P T I+P
Sbjct: 150 MITSGNPVAAAKAHSMGLVDHIINGD-LLEGAMSYAERLIADNAPCKRVSDMT--IDPAT 206
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+F R + K++ P ID V+ V S G+ KE E F + ++S +
Sbjct: 207 ATDALFDSWRKKMAKKSRGQLAPQKIIDAVQIAVTSSVPEGMVKERELFTECVQSTQSSA 266
Query: 121 LVHIFFAQRGTSKVPGVTDLG--LAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+ HIFFA+R +KV DL R + KV ILGGG MG GIA PV++ E+
Sbjct: 267 MRHIFFAERAAAKV---NDLAKDTVDRTISKVGILGGGTMGGGIAMNFANVGIPVVMIEI 323
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N+ L G+ VR N V KGK+++E+ + +SL++G +Y+ DVD+VIEA+ E++
Sbjct: 324 NDDALARGLDIVRKNYSITVSKGKLSEEQMKDCLSLISGSTNYDDLGDVDLVIEAVFEDL 383
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+++FA L+K C ILA+NTS D++ I T D ++G HFFSPA+VM LLE+V
Sbjct: 384 DVKKEVFAKLDKACKQGAILATNTSYQDVDKIAAATTRPDDVIGMHFFSPANVMKLLEVV 443
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +T+ VI + + KKI K P++ G C GF NRM + L + G +D
Sbjct: 444 RGEKTAGDVISTTMKLAKKINKIPVLSGVCYGFIGNRMLRCSVRENQLCMMEGASPEQVD 503
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+ +GM MGP + DL G V+ E I+ M E R G+ +
Sbjct: 504 AVMQGWGMAMGPLAVGDLAGLDVSYKARQALTEEQKGDPKSYCIVDAMVEMGRLGQKSGA 563
Query: 419 GFYLYD-ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y YD + R S DPEV IE+ + + + ++S+ +I+ I +NE +
Sbjct: 564 GYYRYDPDTRARSSDPEVMAVIERLSAEHAI----ERREISDDEILNRITCAWINEGAYI 619
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA +++D+D+ V G GFP YR
Sbjct: 620 LQEGIAQRSSDIDVVYVNGYGFPIYR 645
>gi|107023812|ref|YP_622139.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia AU 1054]
gi|105894001|gb|ABF77166.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia AU 1054]
Length = 708
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 171/504 (33%), Positives = 261/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + EEA +LGLVD + + ++ +A +++ P V +
Sbjct: 159 LMLTGRHASAEEALALGLVDRIAHSDDTLAEGLAYAQELVSLGAP-VRRTRDAQGLADRA 217
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ ARA+ K++ L P +D VEA + AG++ E F + L S
Sbjct: 218 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALTQSFDAGMKLERSLFLQCLDSPQRAG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R +K P PR V+++ ++GGG MG+GIA A + + PV + E +E
Sbjct: 278 LVHAFFAEREAAKAPEARRAN--PRPVERIGVVGGGTMGAGIAVAALDAGLPVTMIERDE 335
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G V V KG+MT ++ L G Y++ D+VIEA+ E++++
Sbjct: 336 ASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARLKGSTSYDALAQADVVIEAVFEDMAV 395
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ +FA+L + C P +LA+NTS +D++++ ++G HFFSPA+VM LLEIV
Sbjct: 396 KQAVFAELARVCKPGAVLATNTSYLDIDVLAASIDRPADVIGLHFFSPANVMKLLEIVVP 455
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ SP V+ + K++KKTP+ G C GF NR+ Y AA L+E G Y IDRA
Sbjct: 456 ARVSPDVVATAFALAKQLKKTPVRAGVCDGFIGNRVLAVYRTAADYLMEDGASPYQIDRA 515
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG PMGPF++ DL G + AT + I + E G+ T +G+
Sbjct: 516 VRGFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPNARYVEISDRLCERGWFGQKTGRGY 575
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ + + R+ G I P+ ++ +I+ ++NE V
Sbjct: 576 YLYPDGARVGTPDPEVEAIVAEERAKKG--ITPR--TFTDDEILRRYLAAMINEGANVVH 631
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP YR
Sbjct: 632 EKIALRPLDVDAVFLYGYGFPRYR 655
>gi|296284660|ref|ZP_06862658.1| fatty oxidation complex, alpha subunit [Citromicrobium
bathyomarinum JL354]
Length = 678
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 260/504 (51%), Gaps = 21/504 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ P+ ++A +GL+D +V + L + A +A + P + + D +
Sbjct: 152 LVAIGNPISAKKAKEIGLLDELVGEDSLAADAIAFAKSKIGQPVPRSS---EGDANQDGI 208
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+IF RA+ ++ P I+ V+A G++KE E F KL+ K+
Sbjct: 209 RNPDIFDEFRAKNGRKMRGFDAPNAAIEAVKAAGELSYAEGVKKERELFMKLMTGTQSKA 268
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPR--RVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+ H FFA+R +KV D+ P +KKV I+G G MG GIA + + PV + E+
Sbjct: 269 MRHYFFAERAANKV---DDIPADPPLIDIKKVGIIGAGTMGGGIAMNFLSAGIPVTILEM 325
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
++ L+ G +R N ++ KKG+MT E+ E+ + LT L+Y D D+VIEA+ E++
Sbjct: 326 KQEALDRGTATMRKNYEATAKKGRMTAEQVEQAMGHLTPTLEYSDLADCDLVIEAVYESM 385
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+ +F L+K ILASNTS +D+N I T ++G HFFSPA+VM LLE+V
Sbjct: 386 DVKKDVFGKLDKVVKQGAILASNTSYLDINEIATATERPGYVLGLHFFSPANVMKLLEVV 445
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +T V+ + + KKI K V G C GF NRM + A L+ G + + +D
Sbjct: 446 RGEKTRDDVLATAMKLSKKIGKVAAVSGVCPGFIGNRMLSKRQEQANQLILEGANYWDVD 505
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+ FG PMGPF++ DL G + P + + I + R G+ K
Sbjct: 506 DVLLDFGFPMGPFQMGDLAGIDIG-------WHRDPSKV--TTIREALCAVGRFGQKAGK 556
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY YDE R+ +P EVK+ I G + +S+ +I E + +P+VNE ++
Sbjct: 557 GFYDYDEARQRTPSDEVKQIIADFAEKEG----NEQRDISKDEIRERLLYPMVNEGAKIL 612
Query: 479 AEGIAVKAADLDIASVMGMGFPPY 502
EG+A +A+D+D+ + G G+P Y
Sbjct: 613 DEGMAQRASDIDVVWINGYGWPLY 636
>gi|452964617|gb|EME69653.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Magnetospirillum sp. SO-1]
Length = 703
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 266/504 (52%), Gaps = 9/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++L+ KPV +A LGLVD V A + + + E + P ++
Sbjct: 152 LVLSGKPVPAAKALELGLVDEVAAADVNAAALAYAKKLVAEGKGPRRTCDLA---VKDAA 208
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+A EI +AQ K N T P+ ++ + A GL+ EA+ ++L + ++
Sbjct: 209 KAAEIIAARQAQVAKTMKNRTSPLKLVEAMAAAASLPFAEGLKLEADISRQLEHAVEARA 268
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ H+FFA R K+PG+T + R ++KV I+G G MG GIA PV + +V++
Sbjct: 269 MRHLFFADREVRKIPGITK-DIKARPIRKVGIIGAGTMGGGIAMCFANIGVPVTIIDVSD 327
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ G+G +R N + V +G +T E+ E + LL+ DY + KD D+ IEA+ E + L
Sbjct: 328 ENLQRGLGIIRKNYERSVSRGSLTAEQLESRMGLLSVSTDYAALKDADLAIEAVFEKMEL 387
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ IFA L+ P IL +NTST+D++ I T ++G HFFSPA+VMPLLEIV+
Sbjct: 388 KKDIFARLDAVLPAGAILGTNTSTLDIDEIAATTKRPADVIGLHFFSPANVMPLLEIVQG 447
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS V++ LD+ K IKKT +V C GF NRM PY + A +V G ID A
Sbjct: 448 AKTSMDVLLTALDMAKLIKKTGVVSKVCYGFIGNRMMDPYGREAERMVLEGATPADIDGA 507
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ +GM MG + D+ G V T + P+ ++ +K G+ T +G+
Sbjct: 508 LEGWGMAMGILAVYDMAGIEVGDNTRIANPHMVPDDPSFYRCSALLVANKWLGQKTGRGY 567
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y YD RK +P PEV + + G ++ K + +I+E + ++NE ++
Sbjct: 568 YRYDSPDRKRAPCPEVIEMMHA----EGKRLNVPARKPGKDEILERCLYSMINEGAKLLE 623
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA++A+D+D+ G GFP YR
Sbjct: 624 EGIALRASDIDVVYTAGYGFPRYR 647
>gi|83647442|ref|YP_435877.1| multifunctional fatty acid oxidation complex subunit alpha [Hahella
chejuensis KCTC 2396]
gi|83635485|gb|ABC31452.1| 3-hydroxyacyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
Length = 715
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/501 (31%), Positives = 259/501 (51%), Gaps = 13/501 (2%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTD---KIEPLGEAREI 65
+ E+A G VDA VAP +L+ A +E + + A + K+ P+ E+
Sbjct: 175 RAEQALKEGAVDAAVAPEKLMDAALSVLRQAIEGKLDYKARREEKTGKLKLNPM-ESMMA 233
Query: 66 FKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHI 124
F+ A+ QA N P+ I V++ ++ EA+ F K+ ++ SL+ +
Sbjct: 234 FETAKGYVAGQAGRNYPAPVEAIKVMQKHAGMTRDKAIEVEAKGFAKMAKTSVAHSLIGL 293
Query: 125 FFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLE 184
F + K DL VK+ A+LG G+MG G+A L P+++K++N+ ++
Sbjct: 294 FLNDQELKK--KAKDLEPKAGAVKQAAVLGAGIMGGGVAYQSALKGTPILMKDINQSGID 351
Query: 185 AGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQI 244
G+ + L RV+KG+M + ++ +T L Y F VD+V+EA++EN +K +
Sbjct: 352 LGLKEAKKLLTKRVEKGRMNASEMADVLNRITPALSYGDFGTVDLVVEAVVENPKVKDIV 411
Query: 245 FADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTS 304
++E IL SNTSTI +N + + + G HFF+P H+MPL+E++R +TS
Sbjct: 412 LREVEDLVREDTILTSNTSTISINRLAQNLKRPENFCGMHFFNPVHMMPLVEVIRGEKTS 471
Query: 305 PQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKF 364
+ I + K + KTPIVV +C GF VNR+ FPY LV G D +D+ + +F
Sbjct: 472 EKAIATTVAYAKAMGKTPIVVNDCPGFLVNRILFPYFGGFIGLVRDGADFQQVDKVMERF 531
Query: 365 GMPMGPFRLADLVGFGVAIATGMQFIENFPER-TY-KSMIIPIMQEDKRAGETTRKGFYL 422
G PMGP L D+VG A G E FP+R +Y ++ II +M + R G+ + KGFY
Sbjct: 532 GWPMGPAYLLDVVGMDTAKHAGDVMAEGFPDRMSYSETTIIDVMFDKGRYGQKSDKGFYA 591
Query: 423 YDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGI 482
Y+ +K KK ++ + ++ SE++I+E + P+ E R +GI
Sbjct: 592 YELDKKGKQ----KKIVDDSVDALIKSVQKSQRDFSEEEIIERMMAPLCIETVRCLEDGI 647
Query: 483 AVKAADLDIASVMGMGFPPYR 503
AA+ D+ + G+GFPP+R
Sbjct: 648 VETAAEADMGLIFGIGFPPFR 668
>gi|424864444|ref|ZP_18288347.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [SAR86 cluster bacterium SAR86B]
gi|400759190|gb|EJP73372.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [SAR86 cluster bacterium SAR86B]
Length = 715
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/410 (37%), Positives = 236/410 (57%), Gaps = 21/410 (5%)
Query: 101 GLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRR-----VKKVAILGG 155
GL+KE E F + L ++++HIFF +R +K+ V PR +KK A++G
Sbjct: 250 GLKKEGELFLECLMHPQREAMIHIFFGERAAAKIDDV------PRETQKQEIKKAAVIGS 303
Query: 156 GLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLL 215
G MG GIA + PV + + +E L+ GIG + N + V++G++ E E L+
Sbjct: 304 GTMGGGIAMCFANAGIPVHILDQDEDNLKRGIGVINKNYEMMVERGRLKPEAKEFVTGLI 363
Query: 216 TGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTY 275
T L+Y+ DVD+V+EA+ EN+ LK++IF L++ P ILA+NTS +D++ I T
Sbjct: 364 TSSLNYDDIHDVDIVVEAVYENIDLKKKIFEQLDEVTKPETILATNTSGLDVDGIASVTK 423
Query: 276 SKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNR 335
+++VG HFFSPA++M LLE+VR N++S + + ++D+GKK+KK +V N GF NR
Sbjct: 424 RPEKVVGTHFFSPANIMRLLEVVRGNESSNETLATIMDLGKKLKKASVVSLNAPGFIGNR 483
Query: 336 MFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAI-ATGMQFIENFP 394
M F Y+ A +L+ G + ID A+ FGM MGPFR+ DLVG + A + +E
Sbjct: 484 MLFGYSNQANMLLLEGALPHEIDGALEAFGMNMGPFRMFDLVGLDLGWRARKLGKLET-- 541
Query: 395 ERTYKSMIIPIMQEDKRAGETTRKGFYLYDERRKA-SPDPEVKKFIEKARSMSGVAIDPK 453
++ I + + R G+ KGFY Y E +A P PE ++ K + + +
Sbjct: 542 --PLQAKISDALCDQDRFGQKNGKGFYNYVEGSRAPHPAPENEELYIKVSEENNI----E 595
Query: 454 FAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++SE +IVE +VNE R+ +EG+A +AAD+DI + G GFP +R
Sbjct: 596 RRQISEDEIVERCMLGLVNEGTRILSEGVAQRAADIDIVYINGYGFPIWR 645
>gi|334145451|ref|YP_004538661.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Novosphingobium sp.
PP1Y]
gi|333937335|emb|CCA90694.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Novosphingobium sp.
PP1Y]
Length = 671
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 253/506 (50%), Gaps = 26/506 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M +P+ A +GLVDAV A LV A A + R L + + +
Sbjct: 152 MAALGEPMSAARAKDIGLVDAVTADGALVEHALGLARTVARQR-----PLPRVSEQRVVP 206
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ I +F AR+ A L + I +E GL E F +L+ +
Sbjct: 207 DPEAIAQFRHTHARRIA-GLHASTMAITCIEKAAELPFAEGLAFERATFMRLMADPRSAA 265
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
H+FFA+R +++ G+ +A R V++V I+G G MGSGIA + + V L E +
Sbjct: 266 QRHVFFAERQAARIDGIGS-DIAARSVERVGIIGAGTMGSGIAINFLSAGLAVTLLETSA 324
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G ++ S V KG+MT + E+ ++LL LD+++ D+VIEA+ EN+++
Sbjct: 325 DALKRGQEQIANTFSSNVAKGRMTARQAEQALALLDVKLDFDALGACDLVIEAVFENMNI 384
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ IFA L+ ILASNTS +DL+ I T +VG HFFSPAH+M LLE+VR
Sbjct: 385 KKDIFARLDHVAREGAILASNTSYLDLDEIAATTSRPSDVVGLHFFSPAHIMKLLEVVRG 444
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
N T+P V+V + + ++I K +V G GF NR+ A L+ G ID
Sbjct: 445 NCTAPDVLVTAMALARRIGKVAVVAGVTPGFIGNRLLRCRQNEAMNLLLEGATPEQIDCV 504
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
FGMPMGPF++ DL G + +E E + + R G+ T GF
Sbjct: 505 HRNFGMPMGPFQMTDLAGVDIGWHRDPARVETIRE---------ALCAEGRWGQKTGAGF 555
Query: 421 YLYDERRKASPDPEVKKFIE---KARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y YDERRK P P V + ++ K R S AI S+ +I+ FP+VNE +
Sbjct: 556 YDYDERRKPHPSPRVAEILQEFRKKRKSSERAI-------SDDEILARTLFPMVNEGALL 608
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EG A +A+D+D+A V G G+P +R
Sbjct: 609 LLEGKAQRASDIDVAWVYGYGWPAWR 634
>gi|365834023|ref|ZP_09375474.1| fatty oxidation complex, alpha subunit FadB [Hafnia alvei ATCC
51873]
gi|364570672|gb|EHM48276.1| fatty oxidation complex, alpha subunit FadB [Hafnia alvei ATCC
51873]
Length = 734
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 259/516 (50%), Gaps = 18/516 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K + E+A +GLVDAVV ++L+S A ++ + W A Y+ K+EPL
Sbjct: 166 IIAAGKDIGAEQALKVGLVDAVVPQDKLISGALNMLRQAIDGQLDWQA--YRQPKLEPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
E+ F A+ + A + PI + +EA L+ E F L R+
Sbjct: 224 LSPIESLMSFTTAKGMVMQTAGKHYPAPITAVKTIEAAAGLKRTEALKLETASFVPLTRT 283
Query: 116 ETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++LV IF Q K + G P +LG G+MG GI L PV+
Sbjct: 284 TQARALVGIFLNDQFVKGKAKKLAQSGQVPTHA---VVLGAGIMGGGITYQSALKGVPVL 340
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+++EK L+ G+ L ++++GK+ K + IS + L+Y + +V+EA+
Sbjct: 341 MKDISEKSLQLGMNEAGKLLNKQLERGKINGLKMAQIISTIQPTLNYAGIEQAQIVVEAV 400
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
+EN +K + A+ E P +LASNTSTI ++ + + G HFF+P H MPL
Sbjct: 401 VENPKIKAAVLAEAESLIKPDAVLASNTSTIPIDQLAASLQRPENFCGMHFFNPVHRMPL 460
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+R +TS Q I ++ K+ KTPIVV +C GF VNR+ FPY LL+ G D
Sbjct: 461 VEIIRGAKTSDQTIGTVVAYATKMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADF 520
Query: 355 YLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKR 411
+ +D+ + K FG PMGP L D+VG A + FP+R K+ + +M + +R
Sbjct: 521 HQVDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAQGFPQRMSKNYRDAVDVMFDAQR 580
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ GFY YD+ K P +K ++ + + P S+++I+ + P++
Sbjct: 581 FGQKNGVGFYRYDQDSKGKP----RKVQDEQTPLLLAEVAPSNENFSDEEIIARMMLPMI 636
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
NE R F E I A+ D+A V G+GFPP+ F
Sbjct: 637 NEVVRCFEEKIVASPAEADMALVYGIGFPPFHGGAF 672
>gi|452749441|ref|ZP_21949203.1| enoyl-CoA hydratase [Pseudomonas stutzeri NF13]
gi|452006667|gb|EMD98937.1| enoyl-CoA hydratase [Pseudomonas stutzeri NF13]
Length = 701
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 182/506 (35%), Positives = 273/506 (53%), Gaps = 12/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ +P+ EA +VD + +L +A +++ R T +T +E
Sbjct: 152 MIVSGQPIGAAEAVEHNIVDELF-DGELREAGLAYARRMVDESRAPRRTGEQTQGLEG-A 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ + + A+ K+ P L P+ CI VEA GL++E E F + L S +
Sbjct: 210 DNEALIRTKHAEVAKRMPGLFSPLRCIAAVEAATKLPLAEGLKRERELFAECLNSPQRGA 269
Query: 121 LVHIFFAQRGTSKVPGVTDL--GLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
LVH FFA+R K+ DL + PR +K A++GGG MG GIA + + PV L E+
Sbjct: 270 LVHSFFAERQAGKI---NDLPADVKPRPIKTAAVIGGGTMGVGIALSFANAGVPVKLLEI 326
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N+ L+ G+ R R + VK+G +T+E + ++L+ GV DY + DVD+V+EA+ E +
Sbjct: 327 NDDALQRGLQRARDTYAASVKRGSLTEEAMAQRLALIAGVTDYAALADVDVVVEAVFEEM 386
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+KQQ+F L+ C P ILASNTS++DLN I T + +VG HFFSPA+VM LLE+V
Sbjct: 387 GVKQQVFEQLDAVCKPGAILASNTSSLDLNAIAAFTKRPEDVVGLHFFSPANVMRLLEVV 446
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
+TS +V+ + IGKK+KK +VVG C GF NRM F Y + A L+E G +D
Sbjct: 447 HGEKTSHEVLATAMAIGKKLKKVSVVVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVD 506
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ FGM MGPF + DL G + A + P + + E G+ T
Sbjct: 507 GALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDKLCEAGMLGQKTGT 566
Query: 419 GFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y+ R +PE+ +E A G+ + KL E+ IVE F +VNE ++
Sbjct: 567 GYYRYEPGNRTPQENPELAPMLEAASREKGI----ERQKLDEQYIVERCIFALVNEGAKI 622
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA +A+D+D+ + G GFP +R
Sbjct: 623 LEEGIAQRASDIDVIYLNGYGFPAFR 648
>gi|186471950|ref|YP_001863268.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phymatum STM815]
gi|184198259|gb|ACC76222.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia phymatum
STM815]
Length = 706
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 260/507 (51%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ K + ++A +GLVD V + +++ +A +L P + +T + L
Sbjct: 157 LMLSGKHIGAQDALKMGLVDRVGQSDDVLTEGLTYAQQLLSEHAP----VRRTRDAQGLA 212
Query: 61 EA---REIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ ARA K++ L P+ +D V A + GL+ E F + L S
Sbjct: 213 DTDAGAAAIAVARADTAKKSRGLLSPLKIVDCVNAALTLPFEDGLRFERARFIECLDSPQ 272
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+LVH F A+R K P PR + ++GGG MG+GIA AL+ + PV + E
Sbjct: 273 RAALVHAFQAERQVQKAPETRSA--QPRPIASAGVVGGGTMGAGIAVALLDAGLPVTMIE 330
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ L G V + KG++T + K ++ G Y++ + D+VIEA+ E+
Sbjct: 331 RDDASLARGRAHVDKVYDGLIAKGRLTHDAKAKKLARFAGSTSYDALAEADVVIEAVFED 390
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++KQ +FA+L++ C P +LA+NTS +D++ I ++G HFFSPAHVM LLE+
Sbjct: 391 MAVKQAVFAELDRVCKPGAVLATNTSYLDIDAIAAGIARPQDVIGLHFFSPAHVMKLLEV 450
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + S V+ D+ KK++K P+ G C GF NRM Y AA L+E G Y I
Sbjct: 451 VVPARVSADVVATAFDLAKKLRKVPVRAGVCDGFIGNRMLAVYRAAADHLMEEGASPYQI 510
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ + G PMGP+++ DL G + AT + I + E G+ T
Sbjct: 511 DKAVRELGFPMGPYQVIDLAGGDIGWATRKRRASTRDPNARYVQIPDRLCERGWFGQKTS 570
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+GFY Y+ +R +PDPEV+ I+ R +G I P+ S++ IV ++NE
Sbjct: 571 RGFYRYEAGQRAGTPDPEVEAIIDAERERAG--ITPR--AFSDEQIVRRYMAAMINEGAN 626
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V E IA++ D+D+ + G GFP +R
Sbjct: 627 VIHERIALRPLDVDVTLMNGFGFPAWR 653
>gi|332308240|ref|YP_004436091.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
4H-3-7+YE-5]
gi|332175569|gb|AEE24823.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
4H-3-7+YE-5]
Length = 705
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/505 (32%), Positives = 264/505 (52%), Gaps = 9/505 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQ-LVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
++ + P K E+A S+GL+D +V +Q LV+ A+++A +L P + I+
Sbjct: 150 LITSGNPCKAEKALSIGLIDHLVEHDQDLVAAAQKYAQQVLNEGLPIRRS--SQSPIDKQ 207
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+ F RA+ K+A P +D +E + + G+Q E E F + SE K
Sbjct: 208 NIDSDWFDKKRAELSKRARGQIAPQHIVDCLEKALNAEFVEGMQFEREAFLNCVTSEQAK 267
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
++ H+FFAQR +KV V+ + R +K VAI+G G MG GIA PV L E++
Sbjct: 268 AMRHLFFAQRLAAKVKEVSP-DTSKRPIKSVAIIGAGTMGGGIAMNFANVGIPVTLLELS 326
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L G+ + N V KG++++ + + ++L++G Y+ VD+VIEA+ E+V
Sbjct: 327 AESLTKGLQLIEKNYAISVSKGRLSESQKAQRLALISGSTSYQELNQVDLVIEAVFEDVE 386
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F L++ C ILA+NTS D++ I + T ++G HFFSPA+VM LLE+VR
Sbjct: 387 IKKQVFRKLDEVCKVGAILATNTSYQDVDAIAQVTKRPQDVIGLHFFSPANVMKLLEVVR 446
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
QT+ VI + + I K P++ G C GF NR+ Y + + L + G +D
Sbjct: 447 GAQTADDVITTSMALATTIAKIPVLSGVCYGFIGNRLLSVYLRQSQLCLLHGATPEQVDS 506
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
A+T +G MGP + DL G + ++ I M R G+ T G
Sbjct: 507 AMTNWGAAMGPLAMNDLAGIDIGFKARQGLSDDKKGSPEVYAIADAMYHAGRLGQKTAVG 566
Query: 420 FYLYD-ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+Y YD E R DP+ IE + G+ P+ A+ +E++I+ + +VNE V
Sbjct: 567 YYRYDPETRARINDPDALAIIEAQSAKFGI---PRNAQ-TEQEILNRMIIALVNEGANVL 622
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
+GIA +++D+D+ + G GFP YR
Sbjct: 623 HDGIAQRSSDIDLVYIFGYGFPAYR 647
>gi|395005834|ref|ZP_10389697.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
gi|394316158|gb|EJE52894.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
Length = 707
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/504 (33%), Positives = 256/504 (50%), Gaps = 7/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ K + + A + GLVDAV + V+ ++L + P T ++
Sbjct: 157 LMLSGKHLNTQAALAAGLVDAVAEGSDPVAAGLAHVRELLARQAPVRPTSALPGRLADKA 216
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ RA K A L P+ ID V+A + G+Q E F L S
Sbjct: 217 AAQAELDVLRADTAKAARGLFSPLKIIDCVQAALDLPFDQGMQFERAQFLACLDSPQRAG 276
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FFA+R +KVP APR + +A++GGG MG+GI + + + PV + E +E
Sbjct: 277 LIHAFFAEREVAKVPEAK--AAAPRPITAIAVIGGGTMGAGITVSALDAGLPVTMIERDE 334
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ G V + V KG+M+ E T++ TG YE D+VIEA+ E++ +
Sbjct: 335 ASIARGRAHVEKVYDALVAKGRMSAEAKAATLARYTGSTRYEDIASADLVIEAVFEDIEV 394
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F +L++ C P +LA+NTS +D++ I T ++G HFFSPA++M LLEIV
Sbjct: 395 KKTVFRELDRVCKPGAVLATNTSYLDIDAIAAATARPQDVIGLHFFSPANIMKLLEIVVP 454
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ ++ K++KK P+ G C GF NR+ Y QAA L+E G Y ID A
Sbjct: 455 VRVSADVVATAFELAKRLKKVPVRAGVCDGFIGNRILAVYKQAADYLMEDGASPYEIDAA 514
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
FG PMGPF++ DL G + AT + + I + E G+ T +GF
Sbjct: 515 ARGFGYPMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEIADRICERGWFGQKTGRGF 574
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY E R DPEV ++ R+ GV P S +I+ +VNE +V A
Sbjct: 575 YLYPEGARVGQSDPEVLAIVDAERARKGVVPRP----FSADEIMRRYMAAMVNEGAKVVA 630
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D+ + G GFP +R
Sbjct: 631 EGIALRPLDVDVTFLSGYGFPRHR 654
>gi|319763962|ref|YP_004127899.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
gi|330823774|ref|YP_004387077.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
gi|317118523|gb|ADV01012.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Alicycliphilus
denitrificans BC]
gi|329309146|gb|AEB83561.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
Length = 702
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 264/505 (52%), Gaps = 13/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M++ V +EA LGLVD V A L + A P VA+ + G
Sbjct: 153 MIVEGNSVTADEALKLGLVDEVAAQELLPAALAFAARMSARSEHP-VASRRQAQAPAEAG 211
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
F R + K L P+ C+ VEA V G++ E E F L+ K+
Sbjct: 212 ----WFDAQRDKLHKSKRGLPAPLECLACVEAAVNLPFDEGMKFERERFDVLVNGTESKA 267
Query: 121 LVHIFFAQRGTSKVPGVT-DLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
L H+F A+R +K+ G+ D + P V+ VA++G G MG GIA + + PV+L E
Sbjct: 268 LRHLFLAERAAAKIAGLAADTPVIP--VRSVAVIGAGTMGGGIAMSFANAGIPVMLIEAA 325
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G+ + N V KGK+ +E+ + ++ +T L++E D D+VIEA+ E++
Sbjct: 326 QEALDRGMATIAKNYDGTVAKGKLAREEADARLARITPTLEFERVADADLVIEAVFESME 385
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+++F L+ C ILA+NTS +D+N I T ++G HFFSPA+VM L+E+VR
Sbjct: 386 VKKELFRKLDALCKADAILATNTSRLDVNEIAATTARPASVIGLHFFSPANVMRLVEVVR 445
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
T+P VI + + ++I K P++VG C GF NRM Y + A L+E G +D
Sbjct: 446 GQATAPSVIASSMAVSRQIGKLPVLVGVCDGFVGNRMVGQYAREAEFLLEEGASPQQVDA 505
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
A+ KFG+ MG F ++DL G ++ A+ + P S + + E R G+ T G
Sbjct: 506 ALQKFGLAMGRFAMSDLAGLDISWASRKRAAPTRPAHLRYSKVADRLCEMGRFGQKTGAG 565
Query: 420 FYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
FY Y+ R PDP V++ IE +G+ + + + IVE + +VNE +V
Sbjct: 566 FYRYEAGSRTPIPDPIVQQVIEDCAREAGI----ERRVIDDAQIVERCIYALVNEGAKVL 621
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA +++D+D+ V G GFP +R
Sbjct: 622 QEGIAQRSSDIDLIYVNGYGFPAWR 646
>gi|221211110|ref|ZP_03584089.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
multivorans CGD1]
gi|221168471|gb|EEE00939.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
multivorans CGD1]
Length = 710
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/504 (33%), Positives = 265/504 (52%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + EEA +LGLVD + + ++ +A +++ P T +
Sbjct: 161 LMLTGRHASAEEALALGLVDRLAHSDDTLAEGLAYAQELVSLGAPARRTRDAQALAD-RA 219
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ ARA+ K++ L P +D VEA + AG++ E F + + S
Sbjct: 220 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALAQPFDAGMKLERSLFLQCIDSPQRAG 279
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R +KVP G A R ++++ ++GGG MG+GIA A + + PV + E +E
Sbjct: 280 LVHAFFAEREAAKVPEARR-GTA-RPIERIGVVGGGTMGAGIAIAALDAGLPVTMIERDE 337
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G V + V KG+MT I+ L G Y++ VD+VIEA+ E++++
Sbjct: 338 AALARGRAHVEKVYDALVAKGRMTSAAQAARIARLKGSTSYDALAQVDVVIEAVFEDMAV 397
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA+VM LLEIV
Sbjct: 398 KQAVFAELARVCKPGAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEIVVP 457
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ + +++KK P+ G C GF NR+ Y AA L+E G Y IDRA
Sbjct: 458 ARASADVVATAFALARQLKKMPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 517
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ +FG PMGPF++ DL G + AT + R I + E G+ T +G+
Sbjct: 518 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTGRGY 577
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ +E+ R+ G+ P+ ++ +I+ ++NE V
Sbjct: 578 YLYPDGARVGTPDPEVEAIVEQERAKKGIV--PR--AFTDDEILRRYLAAMINEGANVVH 633
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP YR
Sbjct: 634 EKIALRPLDVDAVFLHGYGFPRYR 657
>gi|348027575|ref|YP_004870261.1| fatty oxidation complex subunit alpha [Glaciecola nitratireducens
FR1064]
gi|347944918|gb|AEP28268.1| fatty oxidation complex, alpha subunit [Glaciecola nitratireducens
FR1064]
Length = 702
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 183/513 (35%), Positives = 279/513 (54%), Gaps = 23/513 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTD--KIEP 58
++ + P+ +A S+GL+D VV L+S A ++A +++E ATL K ++E
Sbjct: 150 LITSGTPIAASKALSIGLIDKVV-DGDLLSGALEFAKEVIEQG----ATLKKISDLEVEK 204
Query: 59 LGEAREIFKFARAQAR----KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLR 114
G++ E F A+ R K+ P +D +EA V GL+ E E F + ++
Sbjct: 205 QGDSPEFFSELFAEWRITLSKRYRGQEAPQRIVDCIEAAVNKPFNEGLKIERELFMECMQ 264
Query: 115 SETCKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
S +L H+FFA+R +SKV G+ D L + +K+V I+GGG MG GIA + PV
Sbjct: 265 SSQSAALRHLFFAERMSSKVNGLPKDTQL--KDIKRVGIIGGGTMGGGIAMNFVNVGIPV 322
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
L E+N++ L+ G + N V KGK++ E ++ ++TG DY ++D+VIEA
Sbjct: 323 TLLEINDEALQRGKDIIAKNYAITVSKGKLSAELADERQGMITGTTDYNELANMDLVIEA 382
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
+ EN+ +K+Q+F L+ C ILA+NTS D++LI + T ++G HFFSPA+VM
Sbjct: 383 VFENLDIKKQVFKKLDAVCKQGAILATNTSYQDVDLIAQATSRPQDVIGLHFFSPANVMK 442
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
LLEIVR TS QV+ + + K IKK P + C GF NRM PY + + L + G+
Sbjct: 443 LLEIVRGEHTSDQVLATSMAVAKSIKKVPALSRVCYGFIGNRMLRPYVRESQLCLLEGST 502
Query: 354 LYLIDRAITKFGMPMGPFRLADLVG--FGVAIATGMQFIENFPERTYKSMIIPIMQEDKR 411
ID + +FGM MGP ++DL G G G+ + RTY I + E R
Sbjct: 503 PQAIDSVMQRFGMAMGPLAVSDLAGIDIGYKAREGLSDEQKGDIRTY--CIADALYEMGR 560
Query: 412 AGETTRKGFYLYD-ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
G+ T GFY YD R+ PDP+V + IE+ GV + + + I++ + F +
Sbjct: 561 LGQKTGAGFYQYDPNTRQRIPDPKVLEVIEEQAEKRGV----ERKDILDHTILQRLTFAL 616
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+NE ++ EGIA + +D+D+ V G GFP YR
Sbjct: 617 INEGFKILEEGIAQRPSDIDVVYVFGYGFPAYR 649
>gi|282892017|ref|ZP_06300494.1| hypothetical protein pah_c205o035 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498059|gb|EFB40401.1| hypothetical protein pah_c205o035 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 630
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 273/519 (52%), Gaps = 32/519 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA----PNQLVSTAR-----QWALDILEHRRPWVATLY 51
M+L K V G +A+ + L DAV A P + + AR ++A +L R+ +
Sbjct: 81 MILNGKTVNGVKAYKMKLADAVAAWEFFPEKSLEFARNILKPEFAQKVLNRRKQSGIQNF 140
Query: 52 KTDKIEPLGEAREIFKFARAQARKQAPNLTH-----PIVCIDVVEAGVVSGPRAGLQKEA 106
+K P G A + QA+KQ + TH P+V ++ ++ GL+ E
Sbjct: 141 LLEK-NPAGRALIFY-----QAKKQVLDKTHGFYPAPLVALETIKQTYTLPLNEGLEIEQ 194
Query: 107 EDFQKLLRSE--TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIAT 164
++F + + ++ K+LV +FF K G++ + PR VK +LG G MG G+
Sbjct: 195 KNFVENIPTKFMNAKNLVKVFFQNESLKKDAGIS-IQATPRPVKSAGVLGAGTMGGGLIF 253
Query: 165 ALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESF 224
+ PV K++N + + G V + + ++ K+ +++ +G +DY F
Sbjct: 254 LFSYHDIPVRFKDINWEAVAKGYSHVYSLFKKMIELKKLDKDQAILKFQQASGTIDYTGF 313
Query: 225 KDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAH 284
K +D+V+EA EN+ LK + +LE P I+ASNTS++ + + +R VG H
Sbjct: 314 KQLDLVVEAATENLELKHTLLNELESQLRPDAIIASNTSSLTIAQMASVMKHPERFVGMH 373
Query: 285 FFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAA 344
FF+P + MPL+E+V+ QTS + I ++ +++ +TPIVVG+C GF VNR+F
Sbjct: 374 FFNPPNRMPLVEVVKGTQTSDEAIATAVETCRRLGRTPIVVGDCQGFLVNRIFVMGANEI 433
Query: 345 FLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIP 404
+E+G + I++ + FGMPMGPF L+D VG V+ F E + +R +I
Sbjct: 434 VRFLEKGNSIEKIEKTMLDFGMPMGPFHLSDEVGNDVSCKVSHIFEETYGKRMQVPELIE 493
Query: 405 IMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVE 464
M + G+ T KGFYLYD +K + +PEV+K +E V PK +LS +++V+
Sbjct: 494 RMNQKGLFGKKTEKGFYLYDS-KKPTVNPEVQKIVE-------VIGQPK-EELSSEEMVD 544
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
F ++NEA R E I K +D+D+A ++G GFPP+R
Sbjct: 545 RSIFLMINEAARCLTEKIVQKPSDIDMALILGTGFPPFR 583
>gi|421471274|ref|ZP_15919575.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans ATCC BAA-247]
gi|400225835|gb|EJO55970.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans ATCC BAA-247]
Length = 710
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 171/504 (33%), Positives = 265/504 (52%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + EEA +LGLVD + + ++ +A +++ P T +
Sbjct: 161 LMLTGRHASAEEALALGLVDRLAHSDDTLAEGLAYAQELVSLGAPARRTRDAQALAD-RA 219
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ ARA+ K++ L P +D VEA + AG++ E F + + S
Sbjct: 220 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALAQPFDAGMKLERSLFLQCIDSPQRAG 279
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R +KVP G A R ++++ ++GGG MG+GIA A + + PV + E +E
Sbjct: 280 LVHAFFAEREAAKVPEARR-GTA-RPIERIGVVGGGTMGAGIAIAALDAGLPVTMIERDE 337
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G V + V KG+MT I+ L G Y++ VD+VIEA+ E++++
Sbjct: 338 AALARGRAHVEKVYDALVAKGRMTPAAQAARIARLKGSTSYDALAQVDVVIEAVFEDMAV 397
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA+VM LLEIV
Sbjct: 398 KQAVFAELARVCKPGAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEIVVP 457
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ + +++KK P+ G C GF NR+ Y AA L+E G Y IDRA
Sbjct: 458 ARASADVVATAFALARQLKKMPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 517
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ +FG PMGPF++ DL G + AT + R I + E G+ T +G+
Sbjct: 518 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTGRGY 577
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ +E+ R+ G+ P+ ++ +I+ ++NE V
Sbjct: 578 YLYPDGARVGTPDPEVEAIVEQERAKKGIV--PR--AFTDDEILRRYLAAMINEGANVVH 633
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP YR
Sbjct: 634 EKIALRPLDVDAVFLHGYGFPRYR 657
>gi|161523604|ref|YP_001578616.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia multivorans ATCC
17616]
gi|189351627|ref|YP_001947255.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
17616]
gi|160341033|gb|ABX14119.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
multivorans ATCC 17616]
gi|189335649|dbj|BAG44719.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
17616]
Length = 710
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 171/504 (33%), Positives = 265/504 (52%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + EEA +LGLVD + + ++ +A +++ P T +
Sbjct: 161 LMLTGRHASAEEALALGLVDRLAHSDDTLAEGLAYAQELVSLGAPARRTRDAQALAD-RA 219
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ ARA+ K++ L P +D VEA + AG++ E F + + S
Sbjct: 220 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALTQPFDAGMKLERSLFLQCIDSPQRAG 279
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R +KVP G A R ++++ ++GGG MG+GIA A + + PV + E +E
Sbjct: 280 LVHAFFAEREAAKVPEARR-GTA-RPIERIGVVGGGTMGAGIAIAALDAGLPVTMIERDE 337
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G V + V KG+MT I+ L G Y++ VD+VIEA+ E++++
Sbjct: 338 AALARGRAHVEKVYDALVAKGRMTPAAQAARIARLKGSTSYDALAQVDVVIEAVFEDMAV 397
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA+VM LLEIV
Sbjct: 398 KQAVFAELARVCKPGAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEIVVP 457
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ + +++KK P+ G C GF NR+ Y AA L+E G Y IDRA
Sbjct: 458 ARASADVVATAFALARQLKKMPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 517
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ +FG PMGPF++ DL G + AT + R I + E G+ T +G+
Sbjct: 518 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTGRGY 577
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ +E+ R+ G+ P+ ++ +I+ ++NE V
Sbjct: 578 YLYPDGARVGTPDPEVEAIVEQERAKKGIV--PR--AFTDDEILRRYLAAMINEGANVVH 633
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP YR
Sbjct: 634 EKIALRPLDVDAVFLHGYGFPRYR 657
>gi|407937505|ref|YP_006853146.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
gi|407895299|gb|AFU44508.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
Length = 706
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 257/504 (50%), Gaps = 9/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ +P+K + A GLVD +V ++ + ++L + P V EP
Sbjct: 158 LMLSGQPLKAQAALQAGLVDKLVEGTDPLAAGLAYVRELLAAQAP-VRRTRDLAIAEPQA 216
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A + + + K++ L P+ I+ V+A + G+ +E F + L S
Sbjct: 217 -ALAWLEEQKTETAKKSRGLFSPLKIIECVQAALQLPFDEGMARERALFMECLDSPQRAG 275
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FFA+R KVP PR V +A++GGG MG+GIA A + + PV + E +
Sbjct: 276 LIHAFFAEREVVKVPEAQ--AAQPRPVASIAVIGGGTMGAGIAVAALDAGLPVTMIERDA 333
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ + G V + V KG+MT ++ TG Y VD+VIEA+ E++ +
Sbjct: 334 ESIARGRANVEKVYNALVAKGRMTDAAKVAVMARYTGSTSYADIAQVDLVIEAVFEDIEV 393
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F +L++ C P +LA+NTS +D++ I T ++G HFFSPA++M LLEIV
Sbjct: 394 KKTVFRELDRVCKPGAVLATNTSYLDIDAIAAATGRPQDVIGLHFFSPANIMKLLEIVVP 453
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ +P V+ ++ +K+KK P+ G C GF NR+ Y QAA L+E G Y ID A
Sbjct: 454 AKVAPDVVATAFELARKLKKVPVRAGVCDGFIGNRILAVYKQAADYLLEDGASPYEIDAA 513
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG MGPF++ DL G + AT + + I + E G+ T +GF
Sbjct: 514 VRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPQARYVEIADRICERGWFGQKTGRGF 573
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY E R PDPEV ++ R+ G I P+ + +I+ +VNE V
Sbjct: 574 YLYPEGSRTGQPDPEVLAIVDAERAKKG--ISPR--SFTADEIMRRYMAAMVNEGANVVH 629
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D+ V G GFP +R
Sbjct: 630 EGIALRPLDVDVTFVAGYGFPRHR 653
>gi|422319042|ref|ZP_16400125.1| fatty oxidation complex alpha subunit [Achromobacter xylosoxidans
C54]
gi|317406310|gb|EFV86548.1| fatty oxidation complex alpha subunit [Achromobacter xylosoxidans
C54]
Length = 524
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 232/426 (54%), Gaps = 7/426 (1%)
Query: 79 NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVT 138
L P ++ V A V GL+ E F + L S L+H FFA+R T+K+P +
Sbjct: 52 GLFSPAKILEAVRAAVEQPFDDGLRTERALFLQCLDSPQRAGLIHAFFAERETAKIPELK 111
Query: 139 DLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRV 198
PRR+ V ++GGG MG+GIA A++ + PV++ E +E L G RV V
Sbjct: 112 QA--KPRRLDSVGVIGGGTMGAGIAVAVLDAGLPVVMVEQDEAALARGRQRVEHVYDLLV 169
Query: 199 KKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCIL 258
KG+M+ ++ ++ TG DY + + D++IEA+ E++ +K+ +FA L++ P +L
Sbjct: 170 GKGRMSADERAARLARFTGATDYAALGEADLIIEAVFEDMDVKRAVFAQLDRVAKPGAVL 229
Query: 259 ASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKI 318
A+NTS +D++ I + T ++G HFFSPA++M LLE+V QT+ + ++ +++
Sbjct: 230 ATNTSYLDVDRIAQATRGPADVLGLHFFSPANIMKLLEVVVGRQTAADTVATGFELARRL 289
Query: 319 KKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVG 378
+K P+ G C GF NR+ + QAA +++E G Y ID A+ FG PMGP+++ DL G
Sbjct: 290 RKIPVRAGVCDGFIGNRILAVHRQAADMMMEDGASPYEIDAAVRDFGYPMGPYQMVDLAG 349
Query: 379 FGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKASPDPEVKK 437
+ AT + I + E G+ T +GFYLY D R +PDPEV
Sbjct: 350 GDIGWATRKRRAATRDPALRYVQIPDRLCERGWFGQKTGRGFYLYPDGARHGTPDPEVLA 409
Query: 438 FIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGM 497
I+ R +GV P S +DI ++NEA V +GIA++ +D+D+ + G
Sbjct: 410 IIDAERQRAGVTPRP----FSAEDIQRRYLAAMINEAANVLHQGIALRPSDIDMVFLSGY 465
Query: 498 GFPPYR 503
GFP YR
Sbjct: 466 GFPRYR 471
>gi|420250967|ref|ZP_14754168.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
gi|398059407|gb|EJL51260.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
Length = 698
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 169/508 (33%), Positives = 268/508 (52%), Gaps = 21/508 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQ--LVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
+ PV E+AH G++D +V LVS A +A D++ TL + D G
Sbjct: 154 SGNPVPAEQAHEWGVIDYLVTDQDVDLVSAATAFAQDLISK-----GTLAR-DLGAIKGP 207
Query: 62 AREI----FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+++ F+ R + +K+ L P +DV+EA G E + FQ+ S
Sbjct: 208 VKDVDLAVFEAYRQKNQKKWRGLVAPQKIVDVLEASCALTFDEGCALEKKAFQECEHSPE 267
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
SL H+FFA+R KVPG TD P +K VA++G G MG GIA A V+L +
Sbjct: 268 SASLRHLFFAEREAGKVPG-TDKA-TPLDIKSVAVIGAGTMGQGIAQACANGGMSVVLVD 325
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ LE I ++ N ++ V +G M + K ++ +L++ D + D+VIEA+ E+
Sbjct: 326 RTYEALERAIVAIQGNYETSVARGSMARAKADRAFNLISISSDLVAASKCDLVIEAVFED 385
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +KQ +F DL+ P ILA+NTST+D++LI T ++VG HFFSPAHVM L+E+
Sbjct: 386 LGVKQSVFKDLDAVAMPEAILATNTSTLDIDLIANVTRRPQQVVGMHFFSPAHVMKLVEV 445
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
++ ++TS +V +L + K ++K + GN GF NR+ Y + A L+E G + I
Sbjct: 446 IKGSKTSDEVSATILKVTKALRKIAVFAGNEEGFIGNRILGAYGREADYLLEEGATPWQI 505
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK--SMIIPIMQEDKRAGET 415
DR + +FG PMG F + D+ G V + + Y+ S++ + E R G+
Sbjct: 506 DRVLNQFGFPMGLFAMRDMAGLDVIWRIRQEREQKGTRPAYERYSVLADRICELGRFGQK 565
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
T G+Y Y E R A+P P+++ I + + +G+ + ++S++ IV+ I +VNE
Sbjct: 566 TGSGYYKY-EGRTATPCPDIEALIVQVSADAGI----ERREISDEAIVQRIMCAMVNEGA 620
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ A +A D+DI G GFP YR
Sbjct: 621 RIIDSRTAQRAGDIDIVYTNGYGFPSYR 648
>gi|198426800|ref|XP_002125215.1| PREDICTED: similar to enoyl-Coenzyme A, hydratase/3-hydroxyacyl
Coenzyme A [Ciona intestinalis]
Length = 731
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 240/432 (55%), Gaps = 18/432 (4%)
Query: 83 PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSK--VPGVTDL 140
PIVC+ V+++ + + GL+ E + LL S ++ ++ FFA+R SK VPGVT+
Sbjct: 232 PIVCLQVIKSSALLSYQEGLESERQGMFTLLASSQSRAQIYSFFAERQVSKWSVPGVTNY 291
Query: 141 GLA-PRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVK 199
A P +VK V ++G G MG GIA + + + E+N K AG+ +R +++ K
Sbjct: 292 QNAVPMKVKAVGVVGLGTMGRGIAICCLRAGKITYVLEMNTKAQTAGVKYIRGYIETMRK 351
Query: 200 KGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILA 259
+ ++ ++ + L V +Y K+VD+VIEA+ E++ +K++IF LEK C P ILA
Sbjct: 352 RKQINDQQSSMMNNALIPVDNYNGLKNVDLVIEAVFESMKIKKEIFKKLEKVCKPSAILA 411
Query: 260 SNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIK 319
SNTST++++ + T ++ G HFF+PAH+M LLE +R ++SP+ I ++D+GK+++
Sbjct: 412 SNTSTLNIDEMASVTKRPQKVAGMHFFAPAHIMMLLENIRGEKSSPETIATIMDLGKQMR 471
Query: 320 KTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGF 379
KT ++VGNC GF NRMF YT + L+E G +D + +G MG F++ DL G
Sbjct: 472 KTTVLVGNCHGFVGNRMFAYYTAESSFLLEEGAYPKQVDDVLLDYGFAMGRFQVGDLSGT 531
Query: 380 GVAIA-------TGMQFIENFPERTYK----SMIIPIMQEDKRAGETTRKGFYLYDERRK 428
+ T Q PER S + + E R G RKG+Y Y+ R
Sbjct: 532 DIGYKIRRERGLTHKQQPAGTPERKRGDRRYSPLDDFLYEKGRYGLKARKGWYKYEGSRT 591
Query: 429 ASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAAD 488
PDPEV+K I+ R I+P+ +S ++ ++ + FP+VNE V EGIA D
Sbjct: 592 PIPDPEVRKMIDDFRKRHN--INPRH--ISPEETLQRMIFPLVNEGFNVLDEGIAANPWD 647
Query: 489 LDIASVMGMGFP 500
+D+ G +P
Sbjct: 648 IDMIFQHGYAWP 659
>gi|323526726|ref|YP_004228879.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1001]
gi|323383728|gb|ADX55819.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein protein
[Burkholderia sp. CCGE1001]
Length = 706
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 263/507 (51%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + +EA +LGLVD + A +++ +A +L AT +T L
Sbjct: 157 LMLSGRHASAKEALALGLVDRLGASGDILAEGLAYAHALLAA----HATARRTRDAAALS 212
Query: 61 E---AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ + AR + K++ L P+ +D VEA V GL+ E + F + L S
Sbjct: 213 DRAASLAAVVAARTETEKKSRGLFSPLKIVDAVEAAVTQPFEEGLRVERQLFLQCLDSPQ 272
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
LVH FFA+R K P D PR + + ++GGG MG+GIA A++ + PV + E
Sbjct: 273 RAGLVHAFFAEREVLKAPETRDA--KPRALAAIGVVGGGTMGAGIAVAVLDAGLPVTMIE 330
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+E L G + + KG+M+ EK + ++ TG YE+ + D+VIEA+ E+
Sbjct: 331 RDEASLARGRAHIEKVYDGLIAKGRMSAEKKAELMARWTGSTSYEALANADLVIEAVFED 390
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++KQ +FA+L++ C +LA+NTS +D++ I ++G HFFSPA++M LLE+
Sbjct: 391 LAVKQAVFAELDRVCKAGAVLATNTSYLDIDAIAAGISRPADVIGLHFFSPANIMKLLEV 450
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V S V+ ++ KK++KTP+ G C GF NR+ Y AA ++E G Y I
Sbjct: 451 VVPRAVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRILAVYRSAADAMMEDGASPYQI 510
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ FG PMGPF++ DL G + A + I + E G+ T
Sbjct: 511 DAAVRAFGFPMGPFQVVDLAGGDIGWAARKRRAATRNPAARYVQIADRLCERGWFGQKTG 570
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+GFYLY E R PDPEV+ I+ R+ +G I P+ ++ +I+ ++NE
Sbjct: 571 RGFYLYPEGSRSGQPDPEVEAIIDAERARAG--ITPR--SFTDDEIMRRYMAAMINEGAN 626
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V E IA++ D+D+ + G GFP YR
Sbjct: 627 VVHERIALRPLDVDVTLLYGYGFPRYR 653
>gi|297621495|ref|YP_003709632.1| Fatty acid oxidation complex, alpha subunit FadB [Waddlia
chondrophila WSU 86-1044]
gi|297376796|gb|ADI38626.1| Fatty acid oxidation complex, alpha subunit FadB [Waddlia
chondrophila WSU 86-1044]
gi|337293681|emb|CCB91668.1| Fatty acid oxidation complex subunit alpha [Waddlia chondrophila
2032/99]
Length = 714
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 158/517 (30%), Positives = 269/517 (52%), Gaps = 29/517 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALD----------ILEHR--RPWVA 48
M+LT +PV ++A + L DA+ P++ + ++ +LE R R ++
Sbjct: 166 MVLTGRPVDAKKAFKIHLADAIF-PSEFMKEKTDAFVEEILTSKGKEKVLERRKSRGLMS 224
Query: 49 TLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAED 108
L++ + P+G A ++ R+ +K P+ +D+++ + GL+KE E
Sbjct: 225 LLFERN---PIGRAFVFWQSRRSVLQKTKGQYPSPLAALDLIQNTYTMPLKKGLKKEVEA 281
Query: 109 FQKLLRS--ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATAL 166
F K + + +L++IFF K PG+ + VK V +LG G+MGSGIA +
Sbjct: 282 FVKSMSGAFQCAPNLIYIFFNSEQMKKDPGMIGGQATGKEVKSVGVLGAGVMGSGIAWLM 341
Query: 167 ILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKD 226
+ PV +K+VN K + +G + +KK K+ + + L++G +DY F
Sbjct: 342 SYRDLPVRMKDVNWKAVGSGFKSAWDTYKVLIKKRKLKPAQANRKFHLISGTIDYTGFDK 401
Query: 227 VDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFF 286
+D VIEA +EN+ LK +I +LE P I+A+NTS++ ++ + +R+VG HFF
Sbjct: 402 LDFVIEAAVENLELKHKILKELEANVRPDAIIATNTSSLTIDELAPALKHPERLVGMHFF 461
Query: 287 SPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFL 346
+P MPL+EIV +TSP+ + + ++ +++KKTP+VVG+C+GF VNR+F
Sbjct: 462 NPPARMPLVEIVSGEKTSPEAVQTVFELCQRLKKTPVVVGDCSGFLVNRVFAHGFVEIMR 521
Query: 347 LVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIM 406
++E G +D+ KFG+PM PF LAD +G V + F + R ++ +
Sbjct: 522 MLEEGVPQERLDKLFLKFGLPMAPFVLADEIGNDVNLKAMKSFESAYGIRMEVPKLLEKL 581
Query: 407 QEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMI 466
E + G KGFY+YD++ K +PE+ F+ M+ +S+ D ++ +
Sbjct: 582 NEKQLYGRKVGKGFYIYDKKSKKI-NPEITSFLPHQNGMN----------ISDTDAIDRV 630
Query: 467 FFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++NEA R E + LD+A V G+GFPP+R
Sbjct: 631 MLAMINEAARCLQENVIHNPGYLDMALVFGVGFPPFR 667
>gi|254247097|ref|ZP_04940418.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
gi|124871873|gb|EAY63589.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
Length = 720
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 259/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + +EA +LGLVD + + ++ +A +++ P V +
Sbjct: 171 LMLTGRHASADEALALGLVDRIAHSDDTLAEGLAYAQELVSLGAP-VRRTRDAQGLADRA 229
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ ARA+ K++ L P +D VEA + AG++ E F + L S
Sbjct: 230 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALTQSFDAGMKFERSLFLQCLDSPQRAG 289
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R +K P +PR V+++ ++GGG MG+GIA A + + PV + E +E
Sbjct: 290 LVHAFFAEREAAKAPEARRA--SPRPVERIGVVGGGTMGAGIAVAALDAGLPVTMIERDE 347
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G V V KG+MT ++ G Y++ D+VIEA+ E++++
Sbjct: 348 ASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQADVVIEAVFEDMAV 407
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA+VM LLEIV
Sbjct: 408 KQAVFAELARVCKPGAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEIVVP 467
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ + K++KKTP+ G C GF NR+ Y AA L+E G Y IDRA
Sbjct: 468 ARVSADVVATAFALAKQLKKTPVRAGVCDGFIGNRVLAVYRTAADYLMEDGASPYQIDRA 527
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG PMGPF++ DL G + AT + I + E G+ T +G+
Sbjct: 528 VRGFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPNARYVEISDRLCERGWFGQKTGRGY 587
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ + + R+ GV P+ ++ +I+ ++NE V
Sbjct: 588 YLYPDGARVGTPDPEVEAIVAEERAKKGVT--PR--TFTDDEILRRYLAAMINEGANVVH 643
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP YR
Sbjct: 644 EKIALRPLDVDAVFLYGYGFPRYR 667
>gi|239813853|ref|YP_002942763.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Variovorax paradoxus
S110]
gi|239800430|gb|ACS17497.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Variovorax paradoxus
S110]
Length = 711
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 263/504 (52%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++L+ + +EA SLGLVD + + +A +++ + P V + +
Sbjct: 162 LVLSGRHAGAKEALSLGLVDRLGNEADARAEGLAYAQELVAAKAP-VRRTREAGGLADKE 220
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+R + ARA +++ L P+ I+ VEA + G+ E + F + + S
Sbjct: 221 ASRAALEAARADTARKSRGLFSPMKIIEAVEAALTLPFDEGMALERKLFLQCIDSPQRAG 280
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FFA+R K P APR + I+GGG MG+GIA A++ + PV + E +E
Sbjct: 281 LIHAFFAEREVLKAPETRSA--APRALASAGIVGGGTMGAGIAVAMLDAGLPVTMIERDE 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G V +KKG+MT E ++ +G Y++ VD+V+EA+ E++ +
Sbjct: 339 PSLARGRQHVEKVYDGLIKKGRMTPEAKTAVMARFSGSTSYDALAQVDIVVEAVFEDMGV 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L++ C +LA+NTS +D++ I E +VG HFFSPA++M LLEIV
Sbjct: 399 KKAVFAELDRVCKRGAVLATNTSYLDIDEIAESISRPQDVVGLHFFSPANIMKLLEIVVP 458
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ ++ KK+KK P+ G C GF NR+ Y QAA ++E G Y ID A
Sbjct: 459 AKVSADVVATGFELAKKLKKVPVRAGVCDGFIGNRILAVYRQAADHMMEDGASPYQIDEA 518
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG PMGPF+++DL G + AT + + I + E G+ T++G+
Sbjct: 519 VRNFGYPMGPFQVSDLAGGDIGWATRKRKAATRDPQARYVQIADRICERGWFGQKTQRGY 578
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY E R PDPEV I+ R +G I P+ +E++I+ ++NE V
Sbjct: 579 YLYPEGARTGQPDPEVLAIIDAERERAG--ITPR--TFTEEEIMRRYMAAMINEGANVVL 634
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
+ IA++ D+D+ + G GFP +R
Sbjct: 635 QRIALRPLDVDVTFLYGYGFPRHR 658
>gi|393776806|ref|ZP_10365100.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
gi|392716163|gb|EIZ03743.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
Length = 698
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 260/509 (51%), Gaps = 19/509 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQ-LVSTARQWALDILEH-RRPWVATLYKTDKIEP 58
M+++ +P E L+D V+ L+ A A + EH RP + T +
Sbjct: 156 MIVSGEPQTAAELQGTPLLDQVIEHEHVLLPAAVALAEQMGEHGERPMASARTVTAENAD 215
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
L AR Q ++ P CID VEA ++ A L++E F +L S
Sbjct: 216 LQ-----LAAAREQVARRTPREPAKRRCIDAVEASLLLPFEAALERELAYFHELSASPES 270
Query: 119 KSLVHIFFAQR---GTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++L H+FFA+R S +P T + R + A++G G MG+GIA L+ + PV L
Sbjct: 271 RALRHLFFAERTAASISDIPKDTPV----RPIHSAAVVGAGTMGAGIAQCLLDAGIPVKL 326
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E + L+ G+ + Q KG++ + + LLT VLDY + DVD+VIEA+
Sbjct: 327 LEASRAALDRGVASITRQYQRARDKGRIDDARMAARLKLLTPVLDYAALGDVDIVIEAVF 386
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E +K ++F L+ P ILA+NTS +D+N + T ++G HFFSPAHVM LL
Sbjct: 387 EQFDVKSKVFQSLDAVMKPGAILATNTSMLDINRLAATTGRAGDVIGTHFFSPAHVMRLL 446
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR QT V+V ++ + KK+ KT +V C GF NRM Y + A L+E G
Sbjct: 447 EVVRGEQTRADVLVTVMRLAKKLGKTAVVARVCDGFIGNRMIEQYLRQAGFLLEEGATPA 506
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+DRA+ +FG+ MGPFR++D+ G + + P Y + +++ R G+
Sbjct: 507 QVDRAVEQFGLAMGPFRMSDMAGNDIGYDIRKRRSRETPSLFYSRIPDLLVETLDRKGQK 566
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
+G+Y Y E +A P EV I + R + + ++S+++IV+ + + +VNE
Sbjct: 567 VGRGWYDYQEGSYQAIPSAEVDDMIVQFRKAHNL----QARQISDEEIVKRLVYALVNEG 622
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R+ +G A +A+D+D+A G GFP R
Sbjct: 623 YRILDDGTAQRASDIDVAYATGYGFPDTR 651
>gi|167568599|ref|ZP_02361473.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia oklahomensis C6786]
Length = 708
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 261/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + EEA +LGL+D + + ++ +A ++L P V +
Sbjct: 159 LMLSGRHASAEEALTLGLIDRLAHSDDTLAEGLAYAQELLAAGAP-VRRTRDAQGLADRA 217
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A ARA K++ L P +D V A + GL+ E F + L S
Sbjct: 218 AAEAALDAARADVAKKSRGLFSPAKIVDAVAAALAQPFDEGLRAERRLFLECLDSPQRAG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R +K P T G APR V+++ ++GGG MG+GIA A + + PV + E ++
Sbjct: 278 LVHAFFAEREAAKSP-ETRRG-APRPVERIGVVGGGTMGAGIAVAALDAGLPVTMIERDD 335
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE G V V KG+MT ++ G Y++ D+VIEA+ E++++
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYDALAQADVVIEAVFEDMAV 395
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L + C P +LA+NTS +D++ I ++G HFFSPA++M LLE+V
Sbjct: 396 KKAVFAELARVCKPGAVLATNTSYLDIDEIAASVERASDVIGLHFFSPANIMKLLEVVVP 455
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
Q S V+ ++ KK+KK P+ G C GF NR+ Y AA ++E G Y IDRA
Sbjct: 456 AQVSADVVATAFELAKKLKKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ +FG PMGP+++ DL G + AT + R I + E G+ T +G+
Sbjct: 516 VREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIPDRLCERGWFGQKTGRGY 575
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ I+ R+ GV P+ ++++I+ ++NE V
Sbjct: 576 YLYPDGARVGTPDPEVEAIIDDERAKRGVT--PR--AFTDEEIIRRYLAAMINEGANVVH 631
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP YR
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRYR 655
>gi|350544774|ref|ZP_08914321.1| Enoyl-CoA hydratase /Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Candidatus Burkholderia
kirkii UZHbot1]
gi|350527428|emb|CCD38107.1| Enoyl-CoA hydratase /Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Candidatus Burkholderia
kirkii UZHbot1]
Length = 609
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 171/507 (33%), Positives = 260/507 (51%), Gaps = 23/507 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIE-PL 59
M+++ PV E+ L D + A L++ A +A + P+ + KIE P
Sbjct: 73 MIVSGTPVPSEKLAQTALFDEI-AEADLLAAAICFAGQAADRGGPYPKV--RDRKIEHPN 129
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
E +FAR A + P CID +E GV G GL L+++ +
Sbjct: 130 AEG--FIQFARNSVAAVAQHFPAPHECIDAIEKGVKEGFERGL--------ALVQTPESR 179
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+L H FF +R K+ V R++ + ++G G MG GIA + + PV+L E
Sbjct: 180 ALRHTFFGERAADKIADVPP-DTPVRKIGHIGVVGAGTMGGGIAMNFLNAGLPVVLLETK 238
Query: 180 EKFLEAGIGRVRANLQ--SRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L+ G+ +R N + ++VKKGK+TQEK E+ ++L+ L Y D+++EA+ E
Sbjct: 239 QDALDRGLATIRRNYEDEAQVKKGKLTQEKVEERMALIHPTLSYADLAQADLIVEAVFEE 298
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F L++ P ILASNTST+DLN I T ++G HFFSP +VM LLE
Sbjct: 299 LGVKEQVFRQLDEIAKPGAILASNTSTLDLNKIASFTKLPGDVIGMHFFSPTNVMKLLEA 358
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR +T+ V+ ++ + KKI KT +V C GF NRM Y + A ++E G I
Sbjct: 359 VRGEETAKNVLATVIQLAKKIGKTAVVADVCDGFIGNRMIEQYIRQALFMLEEGALPAQI 418
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI +FG MGPFR+++L G + A + PE Y S + + E G+ T
Sbjct: 419 DRAIEQFGFAMGPFRMSNLAGNDIGWAIRKRRYREQPELHY-SRVADRLCEMGCFGQKTG 477
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y RR A P V I G ++ +++IVE + +VNE +
Sbjct: 478 AGWYDYQPGRRDALPSKLVDDMIVAYSKEQGAV----RRRIGDEEIVERLVLSLVNEGAK 533
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA KA+D+D+ + G GFP +R
Sbjct: 534 ILDEGIAAKASDIDMVYLTGYGFPLWR 560
>gi|170694988|ref|ZP_02886137.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
gi|170140086|gb|EDT08265.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
Length = 697
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 165/507 (32%), Positives = 266/507 (52%), Gaps = 15/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML+ PV AH GLVD + + L A +A ++ P L +T ++
Sbjct: 154 MMLSGSPVDAATAHRQGLVDRL-SDGDLFDDALSFARQLVAEGAP----LRRTSQLRVRM 208
Query: 61 EAR--EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+ ++F R K+ + + +D A G Q E F +LL +
Sbjct: 209 DTAPADLFDQLRDDINKRYLSHKGKLHIVDCCVAATKLSFEEGRQFERARFLELLETPES 268
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
K+L + FFA+R +K+ V+ + PR ++ AI+G G MG+GIA + V L +
Sbjct: 269 KALRYNFFAERNAAKIADVS-ADVRPRNIRTAAIVGAGTMGAGIAVCFANAGIRVALIDA 327
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYES-FKDVDMVIEAIIEN 237
+ + LE G+ +R + V KG+++ ++ ++ ++ + + S DVD+V+EA E
Sbjct: 328 STEGLERGMSIIRGVFDADVVKGRISADERDRRLAFVAPTVSLPSAVSDVDLVVEAAFEQ 387
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +KQQIF +L++ PPH ILA+NTS +D++ I T +VG HFFSPAHVM LLE+
Sbjct: 388 LDIKQQIFRELDRLAPPHAILATNTSMLDIDAIAAVTSRPQDVVGMHFFSPAHVMRLLEV 447
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR TS +V++ ++ I +K++KT ++ C GF NRM Y Q A L++ G + I
Sbjct: 448 VRCRMTSDEVLITVMQIARKLRKTAVMSRVCDGFIGNRMLQRYLQQALFLLDEGCTVEQI 507
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ +FGM MGPF + DL G + + + P+ Y S + + E +R G+ +
Sbjct: 508 DSAMERFGMAMGPFAVGDLSGLDIGWSIRKRRYVERPDMMY-SRVADRICEARRLGQKSG 566
Query: 418 KGFYLYDER-RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
KG+Y Y++ RK DPE + R GV P A + E +IV+ + ++NE
Sbjct: 567 KGWYRYEQNSRKRISDPEAAAIVSAYRQEIGV---PSRA-VGEHEIVDRLMLALINEGAL 622
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EG+A +A+D+D+ G GFP R
Sbjct: 623 ILQEGVAQRASDIDVVYATGYGFPVTR 649
>gi|424863887|ref|ZP_18287799.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [SAR86 cluster bacterium SAR86A]
gi|400757208|gb|EJP71420.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [SAR86 cluster bacterium SAR86A]
Length = 717
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 269/507 (53%), Gaps = 16/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILE--HRRPWVATLYKTDKIEP 58
MMLT + ++A +G+VD++ +V + ++A++ E + P V L + IE
Sbjct: 152 MMLTGGHIPAKKALDMGIVDSI--SENVVEDSIKFAIEKAESSEQHPKVRDLNEK-MIEA 208
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGV-VSGPRAGLQKEAEDFQKLLRSET 117
G + I A+A A K P I VEA + + GL+KE E F + L
Sbjct: 209 RGNDK-ILLEAQAMAAKGRKGQFAPGQIIKCVEAAINLDDFDEGLKKEGELFLECLLHPQ 267
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++++HIFF +R SK+ V + +KK I+G G MG GIA + PV + +
Sbjct: 268 REAMIHIFFGERAASKISDVPK-DTPVKEIKKAGIIGSGTMGGGIAMCFANAGIPVHIID 326
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+E+ L+ G+ + N V KG++T E+ + L+T L+YE D D+VIEA+ EN
Sbjct: 327 QDEENLKRGVSVIEKNYDFMVGKGRLTSEQKDAVFGLVTSSLEYEDISDCDIVIEAVYEN 386
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ LK +IF L+ P ILASNTS +D++ I T + +VG HFFSPA++M LLE+
Sbjct: 387 LELKHEIFKTLDSVVKPEAILASNTSGLDIDSIAAVTKRPELVVGTHFFSPANIMRLLEV 446
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR TS + + ++ +GKK+KK +V N GF NRM F YT A +L+ G + I
Sbjct: 447 VRGEVTSDETLATVMAVGKKLKKAAVVSLNAPGFIGNRMLFGYTAQANMLLLEGALPHQI 506
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ FG+ MGPFR+ DLVG + + P + I + E R G+
Sbjct: 507 DQALESFGLNMGPFRMMDLVGLDLGWRARKLSGKESP---LHAKIGDELCEQNRYGQKNG 563
Query: 418 KGFYLYDERRKA-SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y Y E +A + PE ++ E+ +G ++S+++IV+ ++NE
Sbjct: 564 AGYYNYTEGSRAPNAAPENEELYERISQENGFT----RREISDEEIVDRCILALINEGAN 619
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ +EG+A +A D+D+ + G GFP +R
Sbjct: 620 ILSEGVAQRAVDIDVVYINGYGFPIWR 646
>gi|120554072|ref|YP_958423.1| multifunctional fatty acid oxidation complex subunit alpha
[Marinobacter aquaeolei VT8]
gi|120323921|gb|ABM18236.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Marinobacter aquaeolei VT8]
Length = 715
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 254/514 (49%), Gaps = 39/514 (7%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTA----RQWALDILEH--RRPWVATLYKTDKIEPLGEA 62
+ + A G VDAVV ++LV A +Q L+H RR K + +E + A
Sbjct: 175 RADAALKTGAVDAVVGADKLVEAAVAIIKQCNEGKLDHMARREEKKGKIKLNAMESM-MA 233
Query: 63 REIFK-FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSL 121
EI K F +A K P P+ I ++ ++ EA+ F K+ ++ L
Sbjct: 234 FEISKAFVAGKAGKNYP---APVEAIKTMQKHAGMTRDKAIEVEAKGFAKMAKTNVAACL 290
Query: 122 VHIFFAQRGTSKVPGV-----TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
V +F + K +D+ LA A+LG G+MG G+A L P+I+K
Sbjct: 291 VGLFLNDQALKKKASAWEKEASDVNLA-------AVLGAGIMGGGVAFQSALKGTPIIMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++N+ ++ G+ + L RV KGKM + ++ +T L+Y FK+VD+V+EA++E
Sbjct: 344 DINQDGIKLGLNEAKKLLSKRVAKGKMDAGQMGDVLNAITPTLNYGDFKNVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + + E IL SNTSTI +NL+ + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKDAVLRETEDAVREDTILTSNTSTISINLLAKNLKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS + I + K + KTPIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKTSDRAIATTVAYAKAMGKTPIVVNDCPGFLVNRVLFPYFGGFAALVRDGADFQK 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAG 413
ID+ + KFG PMGP L D+VG A E FPER +KS I +M E+ R G
Sbjct: 524 IDKVMEKFGWPMGPAYLLDVVGMDTAKHANEVMAEGFPERMKADFKSA-IDVMFENSRYG 582
Query: 414 ETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+ KGFY Y+E +K P D E K IE S E++I+ + P
Sbjct: 583 QKNDKGFYKYEEDKKGKPKKVVDEETYKLIEPVVDGS--------KDFDEEEIIARMMIP 634
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E R + I AD D+ + G+GFPP+R
Sbjct: 635 LCLETVRCLEDNIVEDPADADMGLIYGIGFPPFR 668
>gi|241763979|ref|ZP_04762020.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
2AN]
gi|241366730|gb|EER61182.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
2AN]
Length = 705
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 167/507 (32%), Positives = 263/507 (51%), Gaps = 15/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI---E 57
+ML+ K + + A GLVD +V V+ +A ++L + P + +T I
Sbjct: 157 LMLSGKHLGAKAALQAGLVDRLVESGTPVAAGLAYANELLAQKAP----VRRTRDIAIAN 212
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
P G ++ RA K+ L P+ I+ V+A V GL +E F + L S
Sbjct: 213 PSGALADLEAL-RADTAKKTRGLFSPLKIIECVQAAVQLTFDEGLARERALFLECLDSPQ 271
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L+H FFA+R T+K+P PR K +AI+GGG MG+GI + + + + V + E
Sbjct: 272 RAGLIHAFFAERETAKIPEAQ--AAQPRAFKTLAIIGGGTMGAGITVSALDAGFTVTMIE 329
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + + G V + KG+MT+E T++ T Y+ DVD+VIEA+ E+
Sbjct: 330 RDAESIARGQKNVEKVYDGLIAKGRMTEEGKAATMARYTPSTSYDEIADVDLVIEAVFED 389
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ +F +L++ C +LA+NTS +D++ I T ++G HFFSPA++M LLEI
Sbjct: 390 LEVKKAVFKELDRVCKKGAVLATNTSYLDIDAIAAATSRPQDVIGLHFFSPANIMKLLEI 449
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + S V+ ++ KK+KK P+ G C GF NR+ Y QAA L+E G Y I
Sbjct: 450 VVPAKVSADVVATAFELAKKLKKVPVRAGVCDGFIGNRILAVYKQAADYLMEDGASPYEI 509
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ FG MGPF++ DL G + AT + + + + E G+ T
Sbjct: 510 DEAVRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEVADRICERGWFGQKTG 569
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+GFYLY + R PDPEV ++ R+ GV P+ + + ++I+ +VNE +
Sbjct: 570 RGFYLYPQGARVGQPDPEVLAIVDAERAKKGVT--PR--QFTPEEIMRRYMAAMVNEGAK 625
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V EGIA++ D+D+ + G GFP +R
Sbjct: 626 VVEEGIALRPLDVDVTFLSGYGFPRFR 652
>gi|398844584|ref|ZP_10601644.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
gi|398254406|gb|EJN39503.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
Length = 703
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 175/518 (33%), Positives = 267/518 (51%), Gaps = 39/518 (7%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA-PNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
++L PV E A LG++D V + L+ A +A ++L R A +P
Sbjct: 154 LILAGTPVNSETALRLGILDRVAKHADALLDEACAFARELLGDR---AAARPDVPYPDPA 210
Query: 60 GEAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
G + F F A A + L P + +D ++A GL E F++ S
Sbjct: 211 GGLPDDFFEHFLEANAPRWKSRLA-PRLVLDALQAACRWPLTEGLAHEQVLFKQAEDSRQ 269
Query: 118 CKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+L H+FFA+R +KVP + DL L P + KVA++G G MG GIA + PVIL
Sbjct: 270 SAALRHVFFAEREAAKVPWIEADLPLRP--ICKVAVIGAGTMGGGIAMNFANAGIPVILL 327
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E + L+ GI ++ N + VK+GK+ E+ E+ +L++G LDY +DVD+VIEA+ E
Sbjct: 328 ERQQDALDRGIAQINRNYANSVKRGKLAPEQLEQRTTLISGTLDYADLRDVDLVIEAVFE 387
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ +KQ++F L++ C P ILA+NTS++D++ I T ++G HFFSPA+VM LLE
Sbjct: 388 KLEIKQEVFRTLDEVCKPGAILATNTSSLDVDRIAAVTSRPHDVIGLHFFSPANVMRLLE 447
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
+V QT+ V+ L +G+ I K P+V G C GF NRM PY + A LV G
Sbjct: 448 VVNGRQTAADVLATTLKLGRTIGKLPVVSGVCFGFIGNRMLEPYAREAHRLVLEGASPAQ 507
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDK------ 410
+D +T + MG + DL G V F+ RT I +D
Sbjct: 508 VDNVLTGLDLNMGVLSMLDLAGIDV------NFLVRDANRT------AINHDDSYCRLGD 555
Query: 411 ------RAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVE 464
R G+ T +GFYLYD+R + D EV E+ ++G P+ + ++I +
Sbjct: 556 ELYALGRYGQKTGRGFYLYDDRERQE-DYEVIALAER---LAGELHIPR-RPIDAQEIHD 610
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
F ++NE ++ EGIA++A+D+D+ + G GFP +
Sbjct: 611 RCLFMLINEGIQLLDEGIALRASDIDLVWINGYGFPAH 648
>gi|338174758|ref|YP_004651568.1| fatty acid oxidation complex subunit alpha [Parachlamydia
acanthamoebae UV-7]
gi|336479116|emb|CCB85714.1| fatty acid oxidation complex subunit alpha [Parachlamydia
acanthamoebae UV-7]
Length = 715
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 273/519 (52%), Gaps = 32/519 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA----PNQLVSTAR-----QWALDILEHRRPWVATLY 51
M+L K V G +A+ + L D+V A P + + AR ++A +L R+ +
Sbjct: 166 MILNGKTVNGVKAYKMKLADSVAAWEFFPEKSLEFARNILKPEFAQKVLNRRKQSGIQNF 225
Query: 52 KTDKIEPLGEAREIFKFARAQARKQAPNLTH-----PIVCIDVVEAGVVSGPRAGLQKEA 106
+K P G A + QA+KQ + TH P+V ++ ++ GL+ E
Sbjct: 226 LLEK-NPAGRALIFY-----QAKKQVLDKTHGFYPAPLVALETIKQTYTLPLNEGLEIEQ 279
Query: 107 EDFQKLLRSE--TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIAT 164
++F + + ++ K+LV +FF K G++ + PR VK +LG G MG G+
Sbjct: 280 KNFVENIPTKFMNAKNLVKVFFQNESLKKDAGIS-IQATPRPVKSAGVLGAGTMGGGLIF 338
Query: 165 ALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESF 224
+ PV K++N + + G V + + ++ K+ +++ +G +DY F
Sbjct: 339 LFSYHDIPVRFKDINWEAVAKGYSHVYSLFKKMIELKKLDKDQAILKFQQASGTIDYTGF 398
Query: 225 KDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAH 284
K +D+V+EA EN+ LK + +LE P I+ASNTS++ + + +R VG H
Sbjct: 399 KQLDLVVEAATENLELKHTLLNELESQLRPDAIIASNTSSLTIAQMASVMKHPERFVGMH 458
Query: 285 FFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAA 344
FF+P + MPL+E+V+ QTS + I ++ +++ +TPIVVG+C GF VNR+F
Sbjct: 459 FFNPPNRMPLVEVVKGTQTSDEAIATAVETCRRLGRTPIVVGDCQGFLVNRIFVMGANEI 518
Query: 345 FLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIP 404
+E+G + I++ + FGMPMGPF L+D VG V+ F E + +R +I
Sbjct: 519 VRFLEKGNSIEKIEKTMLDFGMPMGPFHLSDEVGNDVSCKVSHIFEETYGKRMQVPELIE 578
Query: 405 IMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVE 464
M + G+ T KGFYLYD +K + +PEV+K +E V PK +LS +++V+
Sbjct: 579 RMNQKGLFGKKTEKGFYLYDS-KKPTVNPEVQKIVE-------VIGQPK-EELSSEEMVD 629
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
F ++NEA R E I K +D+D+A ++G GFPP+R
Sbjct: 630 RSIFLMINEAARCLTEKIVQKPSDIDMALILGTGFPPFR 668
>gi|420248747|ref|ZP_14752051.1| 3-hydroxyacyl-CoA dehydrogenase, partial [Burkholderia sp. BT03]
gi|398066816|gb|EJL58366.1| 3-hydroxyacyl-CoA dehydrogenase, partial [Burkholderia sp. BT03]
Length = 489
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 230/430 (53%), Gaps = 7/430 (1%)
Query: 75 KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKV 134
K++ L P+ +D VEA + GL+ E + F + + S +LVH F A+R K
Sbjct: 14 KKSRGLLSPLKIVDCVEAALNLPFDEGLRFERKQFLECVDSPQRAALVHAFQAEREVQKA 73
Query: 135 PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANL 194
P PR + ++GGG MG+GIA AL+ + PV + E +++ L G +
Sbjct: 74 PETR--SAQPRPIASAGVVGGGTMGAGIAVALLDAGLPVTMIERDDESLARGRAHIEKVY 131
Query: 195 QSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPP 254
+ KG++T E K ++ G YE+ DVD+VIEA+ E++++KQ +FA+L++ C
Sbjct: 132 DGLIAKGRLTSEAKAKKLARFIGSTSYEALADVDIVIEAVFEDMAVKQAVFAELDRVCKQ 191
Query: 255 HCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDI 314
+LA+NTS +D++ I ++G HFFSPAH+M LLE+V S V+ D+
Sbjct: 192 GAVLATNTSYLDIDAIAASMSRLQDVIGLHFFSPAHIMKLLEVVVPAHVSADVVATSFDL 251
Query: 315 GKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLA 374
KK++K P+ G C GF NRM Y AA L+E G Y ID+A+ +FG PMGP+++
Sbjct: 252 AKKLRKVPVRAGVCDGFIGNRMLAVYRAAADHLMEDGASPYQIDKAVREFGFPMGPYQVI 311
Query: 375 DLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-RRKASPDP 433
DL G + AT + I + E G+ T++GFY YDE +R +PD
Sbjct: 312 DLAGGDIGWATRKRRAATRNPDARYVQIPDRLCERGWFGQKTKRGFYRYDEGKRAGTPDA 371
Query: 434 EVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIAS 493
EV+ I R +GV P+ S++ IV ++NE V E IA++ D+D+
Sbjct: 372 EVEAIIVAERERAGVT--PR--TFSDEQIVRRYMAAMINEGANVIHERIALRPLDVDVTL 427
Query: 494 VMGMGFPPYR 503
+ G GFP YR
Sbjct: 428 INGFGFPAYR 437
>gi|409404906|ref|ZP_11253379.1| 3-hydroxyacyl-CoA dehydrogenase [Herbaspirillum sp. GW103]
gi|386435673|gb|EIJ48497.1| 3-hydroxyacyl-CoA dehydrogenase [Herbaspirillum sp. GW103]
Length = 713
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/515 (33%), Positives = 267/515 (51%), Gaps = 29/515 (5%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
ML+ + + +EA LGLVD + A + + AR L L+ TL D P+
Sbjct: 162 MLSGRHLGAKEALGLGLVDHL-AEGEDAAQARAAGLRELQ-------TLL--DMGAPVRR 211
Query: 62 ARE------------IFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDF 109
+R+ ARA+ K++ L P ID VEA GL E + F
Sbjct: 212 SRDGSALADSAAAQAAISAARAETGKKSRGLFSPHKIIDAVEAATTLPFDQGLALERQFF 271
Query: 110 QKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILS 169
+ L S L+H FFA+R K P + PR + ++ ++GGG MG+GIA A++ +
Sbjct: 272 LQCLDSPQRAGLIHAFFAEREVQKAPETRNA--QPRPIARIGVVGGGTMGAGIAVAVLDA 329
Query: 170 NYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDM 229
PV + E +++ L G G V ++V KG++TQE + ++ L G YE D+
Sbjct: 330 GLPVTMIERDDEALARGRGHVEKVYDAQVAKGRLTQEARDAVLARLHGSTRYEDLSAADV 389
Query: 230 VIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPA 289
VIEA+ E++++KQ +FA+L++ C P +LA+NTS +D++ I ++G HFFSPA
Sbjct: 390 VIEAVFEDLNVKQAVFAELDRVCKPGAVLATNTSYLDIDAIAASISRPADVIGLHFFSPA 449
Query: 290 HVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVE 349
+VM LLEIV Q + V+ ++ K+++K P+ G C GF NR+ Y QAA L+E
Sbjct: 450 NVMKLLEIVVPRQVAADVVATAFELAKRLRKVPVRAGVCDGFIGNRILAVYRQAADALME 509
Query: 350 RGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQED 409
G Y ID A+ FG MGP+++ DL G + AT + R I + E
Sbjct: 510 DGASPYEIDAAVRDFGFAMGPYQVVDLAGGDIGWATRKRRAATRDPRARYVHIADRLCER 569
Query: 410 KRAGETTRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFF 468
G+ + +GFY Y D R +PDPEV I++ R+ +G I P+ S++DI
Sbjct: 570 GWFGQKSGRGFYRYPDGPRSGAPDPEVLALIDEERARAG--ITPR--SFSKEDIQRRYLA 625
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++NE V + IA++ D+D+ + G GFP +R
Sbjct: 626 AMINEGANVVHQRIALRPLDVDVTFLYGYGFPRHR 660
>gi|327267366|ref|XP_003218473.1| PREDICTED: peroxisomal bifunctional enzyme-like [Anolis
carolinensis]
Length = 729
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 175/519 (33%), Positives = 262/519 (50%), Gaps = 30/519 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
++ T + V EA LG++D VV N + ++ A++ L RR + + K +E
Sbjct: 156 IITTGRHVPATEALKLGILDEVVEENPIEAAINLAQRVTGQPLGPRRLCLKEVPKLPNME 215
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
AR + +K+A P +C + V A V G+QKE + F LL S
Sbjct: 216 ------AFLDEARLKVKKRANGQLSPQMCFEAVRASVYLPFAEGIQKEKQLFMYLLSSGQ 269
Query: 118 CKSLVHIFFAQRGTSK--VPGVTDLGLA-PRRVKKVAILGGGLMGSGIATALILSNYPVI 174
K+L + FFAQR K +P G A P+ VKK A++G G MG GI +L+ + PV+
Sbjct: 270 SKALQYAFFAQRAMEKWVLPNGASWGTADPQPVKKAAVIGLGTMGRGIVASLLKAKIPVV 329
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
E ++K LE G V A L+ K +K +K I + LD+ + KDVD+VIEA+
Sbjct: 330 ALEQDKKQLEVGKAAVMALLEREALKMHQNGQKPKKPI-VPHFTLDFGALKDVDLVIEAV 388
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E ++LK++IF L C P +L +NTS +D++ I T +++G HFFSPAH+M L
Sbjct: 389 FEEIALKKEIFHKLSVICKPEALLGTNTSYLDIDEIASVTDRPHKVIGIHFFSPAHIMKL 448
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+ QTSP I + + K + K +VVGNC GF NRM Y A+ L+E G+
Sbjct: 449 VEIIYGQQTSPSAIATAMSLAKSMGKIGVVVGNCFGFVGNRMLTHYYDQAYFLIEDGSTP 508
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAI-------ATGMQFIENFPERTYKSM----II 403
+D+ + +FG MGP R+ DL G V TG P R M I
Sbjct: 509 EEVDKVLQEFGFKMGPLRVGDLAGLDVGWRIRKGKGQTGDALPPGTPPRHRDGMRYSPIP 568
Query: 404 PIMQEDKRAGETTRKGFYLYDE--RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R GE T KG+YLYD+ + A PDP + F+ R + +S+ +
Sbjct: 569 DMLCEMGRYGEKTGKGWYLYDKPGGKIAQPDPWLHGFLSDFRRTHNITAR----TISQDE 624
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFP 500
I+E + + NE R+ ++GIA +D + G +P
Sbjct: 625 ILERCLYSLANEGFRILSDGIASCPEAIDTIYINGYAWP 663
>gi|323454080|gb|EGB09950.1| hypothetical protein AURANDRAFT_22720 [Aureococcus anophagefferens]
Length = 695
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 171/514 (33%), Positives = 268/514 (52%), Gaps = 35/514 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+M+T + V +EA +LG VDAVVA L + A + ++ RR K ++
Sbjct: 150 IMVTGRQVSAKEALALGAVDAVVAKADLEAEAVK-VVEASPVRR------TKAVLVDGFK 202
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+A I K K L P I VEA V + + GL E F++L S +
Sbjct: 203 DADSIAKL------KARATLNAPKSIIQCVEAAVCNDMQDGLAFEEARFRELQGSTQANA 256
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRR---VKKVAILGGGLMGSGIATALILSNYPVILKE 177
L H+FFA+R SKVPGV+ P V+ ++GGG MG GIA + + PV + E
Sbjct: 257 LQHLFFAERACSKVPGVS-----PEDAVDVQAAGVVGGGTMGRGIAMCFVDNGLPVTILE 311
Query: 178 VNEKFLEAGIGRVRANLQ--SRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
+ A I V + S K+G++T+E ++LL+ D ++ KD D+V+EA+
Sbjct: 312 TSADAAAAAISGVEETYRRSSAFKRGRLTEEALTAKLNLLSSASDVDALKDCDLVVEAVF 371
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E++++K+ IFADL++ P C+LASNTST+ ++ I R+VG HFFSPA+VM LL
Sbjct: 372 EDMAVKRSIFADLDRVTKPSCVLASNTSTLSIDGIAGAVADPARVVGMHFFSPANVMRLL 431
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT-DL 354
E VR +T P + + +GK+++KT ++ G+ GF NRM PY + L+
Sbjct: 432 ENVRGARTGPAAVATAMAMGKRLRKTTVLAGDDFGFIGNRMLEPYGRECLALLRHANCGP 491
Query: 355 YLIDRAITKFGMPMGPFRLADLVG--FGVAIATGMQFIENF---PERTYKSMIIPIMQED 409
L+D A+ ++GM MG F+++DL G G A+ T + + P Y + + +
Sbjct: 492 ELVDAALLEYGMAMGFFQMSDLAGNDIGYAVRTSLGLTDAASRDPAVEYSADVADALARA 551
Query: 410 KRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
R G+ +G+Y Y+ R S DP V + I + S +A D ++ D+V+
Sbjct: 552 GRFGQKVGRGWYAYETPRVPSSDPAVAELIAGFKDAS-LAPD-----VTHGDVVDRALLA 605
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ NE RV EG+A++ +D+D+ G GFP +R
Sbjct: 606 LANEGFRVLEEGLALRPSDIDVVWTSGYGFPRHR 639
>gi|355685539|gb|AER97768.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Mustela putorius furo]
Length = 722
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 168/547 (30%), Positives = 274/547 (50%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D +V + + + ++ + LE RR I+
Sbjct: 151 LITSGRHISADEALKLGILDKMVNSDPVEEAIELVQKISDQPLESRR------LCNKPIQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
IF A + RKQ P C+ ++A V G++KE E F L +S
Sbjct: 205 SFPNMDSIFNEALLKMRKQHPGCLSQETCVRAIQAAVQYPYEVGIKKEEELFMYLQKSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L ++FFA+R SK G + + + V ++G G MG GI TAL + PVI
Sbjct: 265 ARALQYVFFAERNASKWSTPSGASWKTATAQPISSVGVVGLGTMGRGIVTALAKAKIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
E+++K LE + + L+ K + + + LT L + VD+VIEA+
Sbjct: 325 AVELDKKQLETADQIITSLLEKEASKMQRSSHHWLGPKPRLTTSL--KELGGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E ++LK+Q+FA+L C P L +NTS ++++ I T ++G HFFSPAH+M L
Sbjct: 383 FEEINLKKQVFAELSAVCKPEAFLCTNTSALNIDEIASSTDRPHLVIGTHFFSPAHIMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LEI+ + +SP I ++++ KK+KK +VVGNC GF NRM PY + L+E G+
Sbjct: 443 LEIIPSQYSSPTTIATVMNLSKKMKKIGVVVGNCFGFVGNRMLKPYYNQTYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPERTYKSM----II 403
ID+ + +FG MGPFR++DL G V TG P R S I
Sbjct: 503 EEIDQVLEEFGFKMGPFRVSDLAGLDVGWKSRQGQGLTGPMLPSGTPARKRGSERYCPIP 562
Query: 404 PIMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+YLYD+ R PDP + +F+ + R I+P+ +S+ +
Sbjct: 563 DMLCESGRFGQKTGKGWYLYDKPLGRIHKPDPWLSEFLSQYRQT--YHIEPRV--ISQDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EG+A +D+ + G G+P ++ + + +
Sbjct: 619 ILERCLYSLINEAFRILGEGMAATPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 679 LQKYYRQ 685
>gi|413961192|ref|ZP_11400421.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
gi|413931906|gb|EKS71192.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
Length = 709
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 254/507 (50%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML+ + EEA LGLVD V + + + +A +++ + A +T L
Sbjct: 160 MMLSGHHIGAEEALRLGLVDRVGQSDDVFAEGLAFAHELIATK----AAPRRTKNARGLA 215
Query: 61 EAREIFKFARA---QARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ A + +K++ L P+ +D VEA + GL+ E E F + S
Sbjct: 216 DKEASVAAIAAARAETQKKSRGLLSPLKIVDCVEAALNLPFDEGLRFEREQFLECRESPQ 275
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
LVH FF +R T K P D PR + ++ ++GGG MG+GIA AL+ + V + E
Sbjct: 276 RAGLVHAFFVERETQKSPETRDA--QPRALDRIGVIGGGTMGAGIAVALLDAGLAVTMIE 333
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+E LE G V + + KG++T E + + G Y++ D D+VIEA+ E+
Sbjct: 334 RDEASLERGSAHVEKVYDALIAKGRLTHESKTRALQRFHGDTKYDALADADLVIEAVFED 393
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++ K+ +FA L++ C P +LA+NTS +D++ I ++G HFFSPA++M LLE+
Sbjct: 394 MAAKKAVFAQLDRVCKPGAVLATNTSYLDIDEIAASISRPQDVLGLHFFSPANIMKLLEV 453
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + S V+ ++ KK+KK + G C GF NRM Y AA L+E G Y I
Sbjct: 454 VVPARVSADVVATGFELAKKLKKVAVRAGVCDGFIGNRMLAVYRAAADHLMEDGASPYQI 513
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+ FG PMGP+++ DL G + A + I + E G+ T
Sbjct: 514 DRAVRDFGFPMGPYQVIDLAGGDIGWAARKRRAATRDPNARYVRIGDELCERGWFGQKTG 573
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+GFY Y D R +PD EV+ I+ R +GV P +++ IV ++NE
Sbjct: 574 RGFYRYEDGARTGTPDAEVESIIDAERERAGVKPRP----FTDEQIVRRYLAAMINEGAN 629
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ EGIA + D+D + G GFP YR
Sbjct: 630 IVHEGIAQRPLDVDATLMHGFGFPRYR 656
>gi|302341530|ref|YP_003806059.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Desulfarculus
baarsii DSM 2075]
gi|301638143|gb|ADK83465.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Desulfarculus
baarsii DSM 2075]
Length = 709
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 255/509 (50%), Gaps = 16/509 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLV----STARQWALDILEHR-RPWVATLYKTDK 55
MM T KP+K E A GLVD V AP++L+ A+ + + + R T Y+
Sbjct: 162 MMTTGKPIKAEVAFVRGLVDEVCAPDKLLKKAFGAAKMFKARMYNQKVRTARNTFYR--- 218
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
+ E + RA Q+ P +D ++ G+ + A L+ EA F L+ S
Sbjct: 219 LPSFNEKLHFMNYIRAMVGAQSKGYIAPGKILDCLDKGLSADFEADLKVEANGFADLVTS 278
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
K+L+ +F R ++P + DL P + KVA LGGG+MG GI L+ + + +L
Sbjct: 279 AVAKNLIGMFLNTRSAGRLPRIKDL--KPAKPMKVAQLGGGVMGCGIVHLLLANGFECVL 336
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTIS-LLTGVLDYESFKDVDMVIEAI 234
++N+ L G+ V+ +KK KM +K ++ LT E DVD+VIEA+
Sbjct: 337 WDINDAALAKGVESVKKTFAFMIKKKKMKPADLDKLLAEKLTTTTKLEDLGDVDLVIEAV 396
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
+EN+ +KQ+I+ LEK C P I +NTS + + + R++G HFF+PA M L
Sbjct: 397 LENMKVKQEIWLTLEKTCRPDVIFGTNTSALPITEMASVLKDPGRMIGLHFFNPAERMQL 456
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LEI+ QTS Q + +D G++IKK PIVV + GF V+R + LV G
Sbjct: 457 LEIICAQQTSDQTLATSVDFGRRIKKVPIVVNDGPGFYVSRQLGGLMGGSVFLVADGVSG 516
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
I++A+ FGMPMGP LADL G + F +R + + G
Sbjct: 517 EAIEKAMMNFGMPMGPATLADLTGIDINYHVNQTFARELGDRYTVHPLTEAIYNLGDYGR 576
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T +G+ Y K P+P +++ + + VA PK + E++I++ + +NEA
Sbjct: 577 KTGRGYMDYTS-GKPVPNPRLQQVVADYLKANNVA--PK--DMPEQEIIDAMLGLAINEA 631
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ +GI + AD+D+A + G GFPPYR
Sbjct: 632 ALMIEQGICDRPADMDLAMIYGTGFPPYR 660
>gi|387814548|ref|YP_005430034.1| Fatty acid oxidation complex subunit alpha [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|302608168|emb|CBW44433.1| Fatty oxidation complex subunit alpha [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381339564|emb|CCG95611.1| Fatty acid oxidation complex subunit alpha [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 715
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 171/514 (33%), Positives = 254/514 (49%), Gaps = 39/514 (7%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTA----RQWALDILEH--RRPWVATLYKTDKIEPLGEA 62
+ + A G VDAVV ++LV A +Q L+H RR K + +E + A
Sbjct: 175 RADAALKTGAVDAVVGADKLVEAAVAIIKQCNEGKLDHMARREEKKGKIKLNAMESM-MA 233
Query: 63 REIFK-FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSL 121
EI K F +A K P P+ I ++ ++ EA+ F K+ ++ L
Sbjct: 234 FEISKAFVAGKAGKNYP---APVEAIKTMQKHAGMTRDKAIEVEAKGFAKMAKTNVAACL 290
Query: 122 VHIFFAQRGTSKVPGV-----TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
V +F + K +D+ LA A+LG G+MG G+A L P+I+K
Sbjct: 291 VGLFLNDQALKKKASAWEKEASDVNLA-------AVLGAGIMGGGVAFQSALKGTPIIMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++N+ ++ G+ + L RV KGKM + ++ +T L+Y FK+VD+V+EA++E
Sbjct: 344 DINQDGIKLGLNEAKKLLSKRVAKGKMDAGQMGDVLNAITPTLNYGDFKNVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + + E IL SNTSTI +NL+ + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKDAVLRETEDAVREDTILTSNTSTISINLLAKNLKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS + I + K + KTPIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKTSDRAIATTVAYAKAMGKTPIVVNDCPGFLVNRVLFPYFGGFAALVRDGADFQK 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAG 413
ID+ + KFG PMGP L D+VG A + FPER +KS I +M E+ R G
Sbjct: 524 IDKVMEKFGWPMGPAYLLDVVGMDTAKHANEVMADGFPERMKADFKSA-IDVMFENNRYG 582
Query: 414 ETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+ KGFY Y+E +K P D E K IE S E++I+ + P
Sbjct: 583 QKNDKGFYKYEEDKKGKPKKVVDEETYKLIEPVVDGS--------KDFDEEEIIARMMIP 634
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E R + I AD D+ + G+GFPP+R
Sbjct: 635 LCLETVRCLEDNIVEDPADADMGLIYGIGFPPFR 668
>gi|254251314|ref|ZP_04944632.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
gi|124893923|gb|EAY67803.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
Length = 710
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 259/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + +EA +LGLVD + + ++ +A +++ P T D +
Sbjct: 161 LMLTGRHASADEALALGLVDRIAQSDDTLAEGLAYAHELVSLDAPPRRT-RDADGLSDRA 219
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ ARA+ K++ L P +D +EA + AG++ E F + + S
Sbjct: 220 AAQAAIDAARAELPKKSRGLFSPAKIVDAIEAALTQPFDAGMKLERSLFLQCVDSPQRAG 279
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R +KVP P V+++ ++GGG MG+GIA A + + PV + E +E
Sbjct: 280 LVHAFFAEREAAKVPEARRASARP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIERDE 337
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G V V KG+MT + LTG Y++ D+VIEA+ E++++
Sbjct: 338 ASLARGRAHVEKVYDGLVAKGRMTPAARAARLERLTGSTSYDALAQADVVIEAVFEDMTV 397
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L + C P +LA+NTS +D++ + ++G HFFSPAHVM LLEIV
Sbjct: 398 KKAVFAELARVCKPRAMLATNTSYLDIDELAASIDRPADVIGLHFFSPAHVMKLLEIVVP 457
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ +V+ + K++KKTP+ G C GF NR+ Y AA L+E G Y IDRA
Sbjct: 458 ARVDAEVVATAFALAKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 517
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ +FG PMGPF++ DL G + A + R I + E G+ T +G+
Sbjct: 518 VREFGFPMGPFQVVDLAGGDIGWAARKRRAATRDPRARYVEISDRLCERGWFGQKTGRGY 577
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDP+V + R+ G+ P+ ++ +I+ ++NE V
Sbjct: 578 YLYPDGARVGTPDPDVDAIVAHERAKKGIV--PR--TFTDDEILRRYLAAMINEGANVVH 633
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP YR
Sbjct: 634 EKIALRPLDVDAVFLHGYGFPRYR 657
>gi|332286481|ref|YP_004418392.1| fatty oxidation complex subunit alpha [Pusillimonas sp. T7-7]
gi|330430434|gb|AEC21768.1| fatty oxidation complex, alpha subunit [Pusillimonas sp. T7-7]
Length = 696
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/496 (32%), Positives = 255/496 (51%), Gaps = 9/496 (1%)
Query: 8 VKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFK 67
V E A LGL+D V +L + A +A +++ P + + ++ ++F+
Sbjct: 159 VSAERALELGLIDERVVSGKLEAAALDFARGVIDSSMP----VRRLSTLDCSFSDSDVFE 214
Query: 68 FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFA 127
++ P+ CI V+A G+++E F +L S K+ H FFA
Sbjct: 215 AYTESVTRKRRGYIAPLRCIAAVQAAAELPFAKGMERERAMFLELAASFQSKAQRHAFFA 274
Query: 128 QRGTSKVPGVT-DLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAG 186
+R ++VP T V V ++G G MG+GIA PV+L E N LE G
Sbjct: 275 ERAAARVPDATLKKETEVLSVDSVGVVGAGTMGTGIAMCFANVGIPVLLLETNADNLERG 334
Query: 187 IGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFA 246
+ +R N + +G +TQ + ++ I+L+ YE VD+VIEA+ E + +KQ +F
Sbjct: 335 VATIRKNYARTMDRGGLTQAEMDRRIALIRPSAVYEDLAQVDLVIEAVFEELGVKQMVFR 394
Query: 247 DLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQ 306
L++ C P ILASNTS ++++ I + T + ++G HFFSPA+VMPLLE VR +T PQ
Sbjct: 395 MLDQVCKPGAILASNTSYLNIDAIADVTARPEYVLGMHFFSPANVMPLLENVRGAKTLPQ 454
Query: 307 VIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGM 366
V + +GK I KTP++V C GF NRM T+ ++ ++E G IDR + FG
Sbjct: 455 VCAAAMKVGKVIGKTPVMVRVCDGFVGNRMLAKRTRESYFMLEEGATPQQIDRVLYDFGF 514
Query: 367 PMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDER 426
PMGPF ++DL G V + N R I+ + R G+ T GFY Y+E
Sbjct: 515 PMGPFAMSDLAGVDVGWLNRQSRLANLTSRERACDILDQVHALGRFGQKTGAGFYRYEED 574
Query: 427 RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKA 486
R DP++++ I G+ + ++ + +I+E +P++NEA ++ EGI +
Sbjct: 575 RSRHVDPKIEELIVNHSKKRGI----ERRQIPDSEIIERCLYPMINEAAKLLEEGIVDRP 630
Query: 487 ADLDIASVMGMGFPPY 502
D+D+ + G GFP +
Sbjct: 631 GDIDVVWLKGYGFPAF 646
>gi|77165210|ref|YP_343735.1| multifunctional fatty acid oxidation complex subunit alpha
[Nitrosococcus oceani ATCC 19707]
gi|254433896|ref|ZP_05047404.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Nitrosococcus oceani AFC27]
gi|76883524|gb|ABA58205.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Nitrosococcus oceani ATCC 19707]
gi|207090229|gb|EDZ67500.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Nitrosococcus oceani AFC27]
Length = 744
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 286/553 (51%), Gaps = 35/553 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILE--HRRPWVATLYKTDKI-- 56
M+LT K +A +LGLVD VV L+ A A ++++ ++ P T + +I
Sbjct: 168 MILTGKTHPASKACALGLVDEVVPRPVLLEAALARARELVQENNKEPEAGTFQQVSRIFG 227
Query: 57 --EPLGEAREIF----KFARA----QARKQAPNLTH-----PIVCIDVVEAGVVSGPRAG 101
L + R + R+ QA+K+ + TH P+ ++V++ G+ G AG
Sbjct: 228 SMLSLRKVRSLLLEKNSLGRSMVFNQAKKKVLSHTHGNLPAPLQALEVIKTGMEQGLEAG 287
Query: 102 LQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSG 161
+ E E F L S ++L+ +F A+ K PG TD +APR V+KV +LG GLMGSG
Sbjct: 288 FKAEVEAFGDLAVSTKARNLMALFLAKSALKKDPG-TDEEIAPRLVRKVGVLGAGLMGSG 346
Query: 162 IA-TALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLD 220
IA + PV LK++ ++ L G+ + + +VKK +MT + ++ ++L+ +
Sbjct: 347 IAYVTAAKARLPVRLKDLKQEVLRQGLRTLWNAVTEQVKKRRMTAGEGDRVLALVRPTTE 406
Query: 221 YESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRI 280
Y FK D+VIEA++E++ +KQQ+ ++E + P I ASNTS+I ++ I E + + +
Sbjct: 407 YTGFKQADVVIEAVVEDLKVKQQVLREVEAHGGPEMIFASNTSSIPIHKIAEASDRPEAV 466
Query: 281 VGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPY 340
VG H+FSP +PLLE++ T +T P+V+ + +GK+ KT IVV + GF R+ PY
Sbjct: 467 VGMHYFSPVPKVPLLEVIVTEKTVPEVVATCVALGKQQNKTVIVVRDGAGFYTTRILAPY 526
Query: 341 TQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS 400
A L+ G + ID+A+ FG P+GP +L D VG V E F ER +
Sbjct: 527 INEATHLLAEGVSIQDIDKALVNFGFPVGPLKLLDEVGIDVVQKIAHILEEAFGERMKPT 586
Query: 401 MIIPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEK 460
++ + R G+ +G Y Y ++ + K+ + G+ D KL
Sbjct: 587 SVLAKLVSSHRLGKKNGQGLYRY-QKMDGIFKGKGKQVDQSVYQSLGIKPD---KKLEAN 642
Query: 461 DIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFP-----PYRFVTFIHRGFSKS 515
+I P++NEA + EGI A D D+ +V G+GFP P+RF+ ++G
Sbjct: 643 EIAMRCLLPMINEAVHCYHEGILRSARDGDVGAVFGLGFPPFLGGPFRFID--NQGLRNV 700
Query: 516 SSCFKNLLCYFDQ 528
S K L+ Y +Q
Sbjct: 701 S---KQLVHYQEQ 710
>gi|402565355|ref|YP_006614700.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
gi|402246552|gb|AFQ47006.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
Length = 711
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 259/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + V +EA + GLVD V + ++ + +++ P T +
Sbjct: 162 LMLTGRHVSADEALAFGLVDRVAHSDDTLAEGLAYTQELVSLGAPARRT-RDAQGLADRA 220
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ ARA+ K++ L P +D VEA + AG++ E F + + S
Sbjct: 221 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEATLTHAFDAGMKLERSLFLQCIDSPQRAG 280
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R +KVP P V+++ ++GGG MG+GIA A + + PV + E +E
Sbjct: 281 LVHAFFAEREAAKVPEARRASARP--VERLGVVGGGTMGAGIAVAALDAGLPVTMIERDE 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G V V KG+MT ++ G Y++ D+VIEA+ E++++
Sbjct: 339 ASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQADVVIEAVFEDMAV 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA+VM LLEIV
Sbjct: 399 KKAVFAELARACKPGAVLATNTSYLDIDELAASIDRPADVIGLHFFSPANVMKLLEIVVP 458
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ + K++KKTP+ G C GF NR+ Y AA L+E G Y IDRA
Sbjct: 459 ARVSADVVATAFALAKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 518
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ +FG PMGPF++ DL G + AT + R I + E G+ T +G+
Sbjct: 519 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTGRGY 578
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ + AR+ G I P+ ++ +I+ ++NE V
Sbjct: 579 YLYPDGTRVGTPDPEVEAIVADARAKQG--ITPR--TFTDDEILRRYLAAMINEGANVVH 634
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP YR
Sbjct: 635 EKIALRPLDVDAVFLYGYGFPRYR 658
>gi|403049459|ref|ZP_10903943.1| 3-hydroxyacyl-CoA dehydrogenase [SAR86 cluster bacterium SAR86D]
Length = 486
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 246/458 (53%), Gaps = 20/458 (4%)
Query: 53 TDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGV-VSGPRAGLQKEAEDFQK 111
DK+ + + A+A A K P I VEA + + GL++E E F +
Sbjct: 6 NDKLIEARGSENVLVEAQALAAKSRKGQFAPGQIIKCVEAAINLDDFDEGLKREGELFLE 65
Query: 112 LLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRR-----VKKVAILGGGLMGSGIATAL 166
L ++++HIFF +R SK+ V P+ VKK I+G G MG GIA
Sbjct: 66 CLLHPQREAMIHIFFGERSASKISDV------PKDTPIMDVKKAGIIGSGTMGGGIAMCF 119
Query: 167 ILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKD 226
+ PV + + + L+ G+ + N V KG+MT E+ + L+T LDY+ D
Sbjct: 120 ANAGIPVHIIDQDADNLKRGLSVIEKNYDFMVNKGRMTAEQKDMVFGLITSSLDYKDLHD 179
Query: 227 VDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFF 286
VD+ IEA+ EN+ LK +IF L+++ + ILASNTS +D++ I T +++VG HFF
Sbjct: 180 VDIAIEAVYENLDLKLEIFKSLDEHVQNNAILASNTSGLDVDAIASVTKRPNKVVGTHFF 239
Query: 287 SPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFL 346
SPA++M LLE+VR QTS + + +++I KKIKK +V N GF NRM F YT A +
Sbjct: 240 SPANIMRLLEVVRGEQTSHETLATVMNISKKIKKAAVVSLNAPGFIGNRMLFNYTAQANM 299
Query: 347 LVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIM 406
L+ G + ID+AI FG+ MGPFR+ DLVG + + E + I +
Sbjct: 300 LLLEGALPHQIDQAIESFGLNMGPFRMMDLVGLDLGWRARKL---SGAESPLHAKIGDYL 356
Query: 407 QEDKRAGETTRKGFYLYDERRKA-SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEM 465
++ R G+ KG+Y Y E +A +P PE + EK S +G +S+++I++
Sbjct: 357 CDNDRFGQKNGKGYYNYSEGSRAPNPAPENEAIYEKISSDNGFT----RRDISDEEILDR 412
Query: 466 IFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++NE + +EG+A +AAD+D+ + G GFP +R
Sbjct: 413 CILALINEGADILSEGVAQRAADIDVVYINGYGFPIWR 450
>gi|221199900|ref|ZP_03572943.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
multivorans CGD2M]
gi|221207431|ref|ZP_03580440.1| 3-hydroxyacyl-CoA dehydrogenase, C- domain family [Burkholderia
multivorans CGD2]
gi|221172634|gb|EEE05072.1| 3-hydroxyacyl-CoA dehydrogenase, C- domain family [Burkholderia
multivorans CGD2]
gi|221180139|gb|EEE12543.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
multivorans CGD2M]
Length = 710
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 264/504 (52%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + E+A +LGLVD + + ++ +A +++ P T +
Sbjct: 161 LMLTGRHASAEDALALGLVDRLAHSDDTLAEGLAYAQELVSLGAPARRTRDAQALAD-RA 219
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ ARA+ K++ L P +D VEA + AG++ E F + + S
Sbjct: 220 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALAQPFDAGMKLERSLFLQCIDSPQRAG 279
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R +KVP G A R ++++ ++GGG MG+GIA A + + PV + E +E
Sbjct: 280 LVHAFFAEREAAKVPEARR-GTA-RPIERIGVVGGGTMGAGIAIAALDAGLPVTMIERDE 337
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G V + V KG+MT I+ L G Y++ VD+VIEA+ E++++
Sbjct: 338 AALARGRAHVEKVYDALVAKGRMTPAAQSARIARLKGSTSYDALAQVDVVIEAVFEDMAV 397
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA+VM LLEIV
Sbjct: 398 KQAVFAELARVCKPGAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEIVVP 457
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ + + +KK P+ G C GF NR+ Y AA L+E G Y IDRA
Sbjct: 458 ARASADVVATAFALARLLKKMPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 517
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ +FG PMGPF++ DL G + AT + R I + E G+ T +G+
Sbjct: 518 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTGRGY 577
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ +E+ R+ G+ P+ ++ +I+ ++NE V
Sbjct: 578 YLYPDGARVGTPDPEVEAIVEQERAKKGIV--PR--AFTDDEILRRYLAAMINEGANVVH 633
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP YR
Sbjct: 634 EKIALRPLDVDAVFLHGYGFPRYR 657
>gi|115352985|ref|YP_774824.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria AMMD]
gi|115282973|gb|ABI88490.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia ambifaria AMMD]
Length = 711
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 260/507 (51%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYK---TDKIE 57
+MLT + +EA +LGL+D + + ++ +A +++ P T D++
Sbjct: 162 LMLTGRHASADEALALGLIDRLAHSDDTLAEGLAYAQELVSLGAPARRTRDARGLADRVS 221
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A+ ARA K++ L P +D VEA + AG++ E F + + S
Sbjct: 222 ----AQAAIDAARADLPKKSRGLFSPAKIVDAVEAALTQSFDAGMKLERSLFLQCIDSPQ 277
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
LVH FFA+R +K P P V+++ ++GGG MG+GIA A + + PV + E
Sbjct: 278 RAGLVHAFFAEREAAKAPEARRASARP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIE 335
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+E L G V V KG+MT ++ G Y++ D+VIEA+ E+
Sbjct: 336 RDEAALARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQADVVIEAVFED 395
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++KQ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA+VM LLEI
Sbjct: 396 MAVKQAVFAELARVCKPGAVLATNTSYLDIDELAASIDRPADVIGLHFFSPANVMKLLEI 455
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + S +V+ + K++KKTP+ G C GF NR+ Y AA L+E G Y I
Sbjct: 456 VVPARVSAEVVATAFALAKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQI 515
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+ +FG PMGPF++ DL G + AT + R I + E G+ T
Sbjct: 516 DRAVREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTA 575
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+G+YLY D R +PDPEV+ + R+ G I P+ S+ +I+ ++NE
Sbjct: 576 RGYYLYPDGARVGTPDPEVEAIVADERAKKG--ITPR--AFSDDEILRRYLAAMINEGAN 631
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V E IA++ D+D + G GFP YR
Sbjct: 632 VVHEKIALRPLDVDAVFLHGYGFPRYR 658
>gi|171322242|ref|ZP_02911085.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia ambifaria MEX-5]
gi|171092437|gb|EDT37786.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia ambifaria MEX-5]
Length = 549
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/506 (32%), Positives = 256/506 (50%), Gaps = 14/506 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
MLT + +EA +LGLVD + + ++ +A +++ P +T + L +
Sbjct: 1 MLTGRHASADEALALGLVDRLAHSDDTLAEGLAYAQELVSLGAP----ARRTRDAQGLAD 56
Query: 62 AREIFKFARAQAR---KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
A K++ L P +D VEA + AG++ E F + + S
Sbjct: 57 RASAQAAIDAARADLPKKSRGLFSPAKIVDAVEAALTLSFDAGMKLERSLFLQCIDSPQR 116
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
LVH FFA+R +K P P V+++ ++GGG MG+GIA A + + PV + E
Sbjct: 117 AGLVHAFFAEREAAKAPEARRASARP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIER 174
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+E L G V V KG+MT ++ G Y++ D+VIEA+ E++
Sbjct: 175 DEASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQADVVIEAVFEDM 234
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
++K+ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA+VM LLEIV
Sbjct: 235 AVKKAVFAELARVCKPGAVLATNTSYLDIDELAASVDRPADVIGLHFFSPANVMKLLEIV 294
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
+ S +V+ + K++KKTP+ G C GF NR+ Y AA L+E G Y ID
Sbjct: 295 VPARVSAEVVATAFALAKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQID 354
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
RA+ +FG PMGPF++ DL G + AT + R I + E G+ T +
Sbjct: 355 RAVREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTAR 414
Query: 419 GFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+YLY D R +PDPEV+ + R+ G I P+ S+ +I+ ++NE V
Sbjct: 415 GYYLYPDGARVGTPDPEVEAIVADERAKKG--ITPR--AFSDDEILRRYLAALINEGANV 470
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP YR
Sbjct: 471 VHEKIALRPLDVDAVFLHGYGFPRYR 496
>gi|299529900|ref|ZP_07043328.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni S44]
gi|298722072|gb|EFI63001.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni S44]
Length = 705
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 255/504 (50%), Gaps = 7/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + + + + GLVD + V+ +A ++L P ++
Sbjct: 157 LMLSGQQIGAKAGLAAGLVDKLDDGADPVAAGLAYARELLAQGAPLRPVSATPGRLADKA 216
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ RA K++ L P+ ID V+A + GL+ E F + S
Sbjct: 217 AAQAELDALRADTAKKSRGLFSPLKIIDCVQAALDLPFAEGLKFERAQFLACIDSPQRAG 276
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FFA+R T+K+P PR K+AI+GGG MG+GI + + + V + E +
Sbjct: 277 LIHAFFAERETAKIPEAR--AAQPRAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERDA 334
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ + G V + KG+M++E ++ T Y+ DVD+VIEA+ E++ +
Sbjct: 335 ESIARGQANVEKVYNGLIAKGRMSEEAKAAILARYTPSTRYDDIADVDLVIEAVFEDLEV 394
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F +L++ C +LA+NTS +D++ I T ++G HFFSPA++M LLEIV
Sbjct: 395 KKAVFKELDRVCKSGAVLATNTSYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVVP 454
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ +P V+ ++ KK+KK P+ G C GF NR+ Y QAA L+E G Y ID A
Sbjct: 455 AKVAPDVVTTAFELAKKMKKVPVRAGVCDGFIGNRILATYKQAADYLMEDGASPYEIDEA 514
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG MGPF++ DL G + AT + + I + E+ G+ T +GF
Sbjct: 515 VRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEIADRICENGWFGQKTGRGF 574
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY + R PDPEV ++ R+ GV P + ++I+ +VNE +V
Sbjct: 575 YLYPQGARIGQPDPEVLAIVDAERAKKGVTARP----FTAEEIMRRYMAAMVNEGAKVVG 630
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D+ + G GFP +R
Sbjct: 631 EGIALRPLDVDVTFISGYGFPRHR 654
>gi|319791569|ref|YP_004153209.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Variovorax
paradoxus EPS]
gi|315594032|gb|ADU35098.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Variovorax
paradoxus EPS]
Length = 711
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 160/507 (31%), Positives = 262/507 (51%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + +EA SLGLVD + + +A +++ + P + +T + L
Sbjct: 162 LMLSGRHAGAKEALSLGLVDRLGTEADARAEGLAYAEELVAAKAP----VRRTREAAGLA 217
Query: 61 E---AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ +R + AR K++ L P+ ++ VE + G+ E + F + + S
Sbjct: 218 DKEASRAALEAARTDTAKKSRGLFSPMKIVEAVEGALTLPFDEGMALERKLFMQCIDSPQ 277
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L+H FFA+R K P PR+++ I+GGG MG+GIA A++ + PV + E
Sbjct: 278 RAGLIHAFFAEREVLKAPETKSAN--PRKLESAGIVGGGTMGAGIAVAMLDAGLPVTMIE 335
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+E L G V + KG+MT E ++ +G Y++ +VD+V+EA+ E
Sbjct: 336 RDEPSLARGRQHVEKVYDGLIAKGRMTPEAKAAVMARFSGSTSYDALANVDIVVEAVFEE 395
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ +FA+L++ C P +LA+NTS +D++ I +VG HFFSPA++M LLEI
Sbjct: 396 MGVKKAVFAELDRVCKPGAVLATNTSYLDIDEIAASIKRPQDVVGLHFFSPANIMKLLEI 455
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + S V+ ++ KK+KK P+ G C GF NR+ Y QAA ++E G Y I
Sbjct: 456 VVPAKVSADVVATGFELAKKLKKVPVRAGVCDGFIGNRILAVYRQAADHMMEDGASPYQI 515
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ +FG PMGPF+++DL G + AT + + I + E G+ T+
Sbjct: 516 DEAVREFGYPMGPFQVSDLAGGDIGWATRKRKAATRDPQARYVQIADRICERGWFGQKTQ 575
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+G+YLY E R SPDP V I+ R +G+ + ++I+ +VNE
Sbjct: 576 RGYYLYPEGARTGSPDPAVLAIIDAERERAGIV----RRSFTNEEIIRRYMAAMVNEGAN 631
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V + IA++ D+D+ + G GFP +R
Sbjct: 632 VVLQRIALRPLDVDVTFLYGYGFPRHR 658
>gi|90420390|ref|ZP_01228298.1| fatty oxidation complex, alpha subunit FadB [Aurantimonas
manganoxydans SI85-9A1]
gi|90335724|gb|EAS49474.1| fatty oxidation complex, alpha subunit FadB [Aurantimonas
manganoxydans SI85-9A1]
Length = 691
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 263/504 (52%), Gaps = 18/504 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LT PV A +LG+VD + A L + A ++A I+ RP + +++ G
Sbjct: 155 MILTGTPVGAASAVTLGIVDELAA-GDLRAEALRFANAIVTEGRPLRRIRDEAQRLD--G 211
Query: 61 EAREI-FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
E + + AR + ++ +D V GL +E E F +LL K
Sbjct: 212 ENVDAALEGARERHGRKMRGYESFERAMDAVANAARLPFDEGLAREREIFVELLGGTQSK 271
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ ++F A R +K+ + R++ +V I+G G MG GIA + + PV + E
Sbjct: 272 AQRYVFGATRAVAKIADIP-ADTPTRKIGRVGIIGAGTMGGGIAMKFLSAGIPVTIIEQA 330
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
++ L+ G G + N + V++G++ E EK +LLT L+++ D D++IEA E ++
Sbjct: 331 QEALDRGTGTIAKNYAASVRRGRIRAEDAEKANALLTPSLEFDDLADCDLIIEAAFEEMA 390
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K++IFA L+ ILASNTS +D++ I T ++G HFFSPA++M LLE+VR
Sbjct: 391 VKKEIFARLDAIARDGAILASNTSYLDIDEIASVTKRPADVLGMHFFSPANIMKLLEVVR 450
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+T+ VI + IG+ I KT ++VG C GF NRM + A L+ G + +DR
Sbjct: 451 GRETAKDVIATAMKIGRDIGKTAVLVGVCHGFVGNRMLSARQREANKLILEGAMPWDVDR 510
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
+T FG+PMGPF++ADL G + E ER + E R G+ T G
Sbjct: 511 VLTDFGLPMGPFQMADLAGLDLGWNRETSKGETIRER---------LCEADRRGQKTSAG 561
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
FY YDE RK SP V++ I G + + + +I+E + +P++NE ++
Sbjct: 562 FYDYDENRKGSPSAMVEEIILIKSREEGF----ERRAIGDDEILERLVYPMINEGAKILD 617
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA +A+D+D+ + G G+P YR
Sbjct: 618 EGIAQRASDIDVVWINGYGWPVYR 641
>gi|260797707|ref|XP_002593843.1| hypothetical protein BRAFLDRAFT_214740 [Branchiostoma floridae]
gi|229279073|gb|EEN49854.1| hypothetical protein BRAFLDRAFT_214740 [Branchiostoma floridae]
Length = 586
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 169/518 (32%), Positives = 267/518 (51%), Gaps = 43/518 (8%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + + + ++A SLGLVD +V N L+ A ++A I RP
Sbjct: 33 MITSGQHINAKQALSLGLVDKIVQGN-LLKEAIRFAQSI--EGRP--------------- 74
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E+ + AR ++A P+ C+ + A V+ G+Q+E E L+ S +
Sbjct: 75 -VEEVVEAARKTILRRARGAIAPMTCVQAIRASVLPF-DLGMQRERELMTFLMTSWQAPA 132
Query: 121 LVHIFFAQRGTSKVPGVTDLGL-----APRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+ FF++R + D + PR +K V ++G G MG GI +L+ + V+L
Sbjct: 133 QQYAFFSEREVRRWSHPRDKRVNFKTAKPRVIKSVGVVGAGTMGVGITISLLQAGLKVVL 192
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
EVN+K L+ G + ++K ++Q+ + +S L +DY DVDMVIEA+
Sbjct: 193 LEVNKKQLDKGQNCSLPTAITMIQK-TLSQKSASQRMSQLITTMDYSQLSDVDMVIEAVF 251
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E++ LK+++F L+ P ILASNTS +D++ I T D++VG HFFSPA+VM LL
Sbjct: 252 ESLKLKKEVFKKLDAITKPQAILASNTSGLDIDKIAAVTKRPDKVVGTHFFSPANVMRLL 311
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E + TSP+ I + +G I K ++VGNC+GF NRM PY + L+E G +
Sbjct: 312 ENIYGKHTSPETIATAMQLGVTIGKVGVLVGNCSGFVGNRMLGPYRAESLFLLEEGLEPQ 371
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVA----IATGMQFIENFPERT-----YKSMIIPI- 405
+D+AI +FG PMGPFR++DL G + I G+ + P T + + P+
Sbjct: 372 DVDKAIEEFGFPMGPFRMSDLAGGDIGWRGRIEKGLTTEQGPPPDTPPLYRHGNRYCPLP 431
Query: 406 --MQEDKRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDI 462
+ R G+ T G+Y Y+ R A PDP V + I + R G K +S ++I
Sbjct: 432 DMLCMKGRLGQKTGAGWYRYEPGSRAALPDPVVTQMIHEYRQEHGF----KKRNISSQEI 487
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFP 500
VE +P++NE + EGIA ++ D+D+ + G G+P
Sbjct: 488 VERCLYPLINEGFHILDEGIAARSMDIDVIYLFGYGWP 525
>gi|172061837|ref|YP_001809489.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria MC40-6]
gi|171994354|gb|ACB65273.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
MC40-6]
Length = 711
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 256/507 (50%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + +EA +LGLVD + + ++ +A +++ P +T + L
Sbjct: 162 LMLTGRHASADEALALGLVDRLAHSDDTLAEGLAYAQELVSLGAP----ARRTREARGLA 217
Query: 61 EAREIFKFARAQAR---KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ A K++ L P +D VEA + AG++ E F + + S
Sbjct: 218 DRASAQAAIDAARADLPKKSRGLFSPAKIVDAVEAALTQSFDAGMKLERSLFLQCIDSPQ 277
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
LVH FFA+R +K P P V+++ ++GGG MG+GIA A + + PV + E
Sbjct: 278 RAGLVHAFFAEREAAKAPEARRASARP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIE 335
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+E L G V V KG+MT ++ G Y++ D+VIEA+ E+
Sbjct: 336 RDEASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQADVVIEAVFED 395
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++K+ +FA+L + C P +LA+NTS +D++ + +VG HFFSPA+VM LLEI
Sbjct: 396 MAVKKAVFAELARVCKPGAVLATNTSYLDIDELAATIDRPADVVGLHFFSPANVMKLLEI 455
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + S +V+ + K++KKTP+ G C GF NR+ Y AA L+E G Y I
Sbjct: 456 VVPARVSAEVVATAFALAKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQI 515
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+ +FG PMGPF++ DL G + AT + R I + E G+ T
Sbjct: 516 DRAVREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTA 575
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+G+YLY D R +PDPEV+ R+ G I P+ S+ +I+ ++NE
Sbjct: 576 RGYYLYPDGARVGTPDPEVEAIAADERAKKG--ITPR--AFSDDEILRRYLAAMINEGAN 631
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V E IA++ D+D + G GFP YR
Sbjct: 632 VVHEKIALRPLDVDAVFLHGYGFPRYR 658
>gi|333916713|ref|YP_004490445.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
gi|333746913|gb|AEF92090.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
Length = 705
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 263/506 (51%), Gaps = 13/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ K + + A + GLVD +V + +A ++L +T IE
Sbjct: 157 LMLSGKHLSAKAALAAGLVDKLVDGTDATAAGLVYANELLASN----TAPRRTRDIEIAD 212
Query: 61 EAREIFKFARAQAR--KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+A + + A K++ L P+ ++ V A V G+ KE F + L S
Sbjct: 213 KAAALAELDALAAETAKKSRGLFSPLKIVECVRAAVELPFDEGIAKERALFVECLNSPQR 272
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
L+H FFA+R T+K+P APR K+A++GGG MG+GI + + + V + E
Sbjct: 273 AGLIHAFFAERETAKIPEAK--AAAPRHFAKIAVIGGGTMGAGITVSALDAGLTVTMIER 330
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ + + G V + KG+MT+E ++ T Y+ KDVD+VIEA+ E++
Sbjct: 331 DAESIARGQANVEKVYNGLIAKGRMTEEAKAAVMARYTPSTSYDDIKDVDLVIEAVFEDL 390
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+ +F +L++ C P +LA+NTS +D++ I T ++G HFFSPA++M LLEIV
Sbjct: 391 EVKKAVFKELDRVCKPGAVLATNTSYLDIDAIAAATSRPQDVIGLHFFSPANIMKLLEIV 450
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
+ +P V+ ++ K++KK P+ G C GF NR+ Y QAA ++E G Y ID
Sbjct: 451 VPAKVAPDVVTTAFELAKRMKKVPVRAGVCDGFIGNRILAVYKQAADYIMEDGASPYEID 510
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ FG PMGPF++ DL G + AT + + + + E G+ T +
Sbjct: 511 EAVRGFGYPMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEVADRVCERGWFGQKTGR 570
Query: 419 GFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
GFYLY + R PDPEV ++ R+ GV P+ K + ++I+ +VNE +V
Sbjct: 571 GFYLYPQGARVGQPDPEVLAIVDAERAKKGVT--PR--KFTPEEIMRRYMAAMVNEGAKV 626
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D+ + G GFP +R
Sbjct: 627 VEEGIALRPLDVDVTFLSGYGFPRFR 652
>gi|420251826|ref|ZP_14754984.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
gi|398056833|gb|EJL48814.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
Length = 706
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 269/504 (53%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + V +EAH+LGLVD V + +++ + +L+ + P V D +
Sbjct: 157 LMLSGRHVGAKEAHALGLVDLVGETDDVLAEGFAYVQALLDAQAP-VRRTRDADGLADRA 215
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+R + ARA+ K++ L P+ +D V+A + GL+ E + F + L S
Sbjct: 216 ASRANIEAARAETSKKSHGLFSPLKIVDAVQAALELPFDDGLRHERQLFLQCLDSPQRAG 275
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H F A+R K P + PR++ V ++GGG MG+GIA A++ + PV + E ++
Sbjct: 276 LIHAFLAEREVLKAPETRNA--KPRKIASVGVVGGGTMGAGIAVAVLDAGLPVTMIERDD 333
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G+ + + + KG+MT E ++ G Y++ D+VIEA+ E +++
Sbjct: 334 VSLARGLAHIEKVYDNLIAKGRMTPEAKAAVLARWNGSTSYDALGTADLVIEAVFEEMTV 393
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K +FA L++ C P +LA+NTS +D++ I +VG HFFSPA++M LLE+V
Sbjct: 394 KHAVFAKLDRVCKPGAVLATNTSYLDIDAIAASVSRPGDVVGLHFFSPANIMKLLEVVVP 453
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
Q S V+ D+ KK++K P+ G C GF NR+ Y AA ++E G Y IDRA
Sbjct: 454 AQVSADVVATAFDLAKKLRKVPVRAGVCDGFIGNRVLAIYRAAADHMMEDGASPYQIDRA 513
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG PMGPF++ADL G + AT + + I + E G+ T +G+
Sbjct: 514 VRAFGFPMGPFQVADLAGGDIGWATRKRRAATRDPQQRYVQIADRICERGWFGQKTGRGY 573
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y+Y D R +PDPEV+ I+ R +GV P+ + S+++I+ ++NE V
Sbjct: 574 YVYADGARTGNPDPEVESIIDAERERAGVT--PR--EFSDEEIMRRYMAAMINEGANVVH 629
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
+ IA++ D+D+ + G GFP +R
Sbjct: 630 QRIALRPLDVDVTFLYGYGFPRHR 653
>gi|372270559|ref|ZP_09506607.1| multifunctional fatty acid oxidation complex subunit alpha
[Marinobacterium stanieri S30]
Length = 708
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/508 (32%), Positives = 264/508 (51%), Gaps = 18/508 (3%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
ML+ KP K + A LG VD VV ++L + A ++ +A + K + L
Sbjct: 167 MLSGKPQKAKAALELGAVDRVVDASELRTEALNLLQSVVNGDVDHLAN--RQRKQQALEN 224
Query: 62 AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSL 121
EI A ++K PN P+ + +V L+ E + F L +++ SL
Sbjct: 225 GAEIEAAAEQMSKKLDPNYPAPLQILKLVSTHATLPFDDALKAEVDAFVALAKTDAAASL 284
Query: 122 VHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ +F Q K G T AP VKK A+LG G+MG G+A + P+++K++ +
Sbjct: 285 IGLFMNDQLLKKKARGWTKQA-AP--VKKSAVLGAGIMGGGVAYQSASTGTPILMKDIRD 341
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ L+ GI L +++KG++ + EK +S + L+Y F VD+V+EA++EN ++
Sbjct: 342 EALDLGINTATGLLNKQIEKGRLDEAGKEKVLSAIEPTLEYTGFDTVDIVVEAVVENPNV 401
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K + AD+EK P + +L SNTSTI ++ + + D+ G HFF+P H+MPL+E++R
Sbjct: 402 KAAVLADVEKAVPANAVLTSNTSTISIDQLAKSVSRPDQFCGMHFFNPVHLMPLVEVIRG 461
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+QTS + I + + KTPIVV +C GF VNR+ FPY A L+ G D ID
Sbjct: 462 SQTSDETIARTVAYAAAMGKTPIVVNDCPGFLVNRILFPYFNAFNRLLVDGVDFERIDPV 521
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK--SMIIPIMQEDKRAGETTRK 418
+ FG PMGP LAD+VG + E FP R ++ + + + G+ K
Sbjct: 522 MEGFGWPMGPAYLADVVGIDTLVHADHVMQEGFPGRMGHDADVVAEALLDAQHLGQKNGK 581
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKF---AKLSEKDIVEMIFFPVVNEAC 475
GFY Y + D ++F +KA +++ ID + +LS++DI++ + P+ EA
Sbjct: 582 GFYEYGK------DENGRRF-KKASAVAQELIDARIKEKVELSDQDIIDRMMIPMCLEAA 634
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
+GI A+ D+ ++G+GFP +R
Sbjct: 635 LCLEDGIVETPAEADMGLILGLGFPRFR 662
>gi|187924712|ref|YP_001896354.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phytofirmans PsJN]
gi|187715906|gb|ACD17130.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
phytofirmans PsJN]
Length = 706
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 154/504 (30%), Positives = 261/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++L+ + +EA + GL+D + + + +++ + ++L P V +
Sbjct: 157 LILSGRHASAKEALAFGLIDRLGSSDDILAEGLAYVHELLAAHAP-VRRTRDAAALSDRA 215
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ ARA+ K++ L P+ +D VEA + GL+ E + F + + S
Sbjct: 216 ASLAAVATARAETAKKSRGLFSPLKIVDAVEAAIEQPFDEGLRVERKLFLECIDSPQRAG 275
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FFA+R K P PR + + ++GGG MG+GIA A++ + PV + E ++
Sbjct: 276 LIHAFFAEREVLKAPETR--AAKPRTLNTIGVVGGGTMGAGIAVAVLDAGLPVTMIERDD 333
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G + + KG+++ EK +S +G Y++ D+VIEA+ E++++
Sbjct: 334 ASLARGRAHIEKVYDGLIAKGRLSAEKKAALMSRWSGSTSYDALAGADLVIEAVFEDLAV 393
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ +FA+L++ C +LA+NTS +D++ + ++G HFFSPA++M LLE+V
Sbjct: 394 KQAVFAELDRVCKAGAVLATNTSYLDIDALASSVSRPADVIGLHFFSPANIMKLLEVVVP 453
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
Q S V+ ++ KK++KTP+ G C GF NR+ Y AA ++E G Y ID A
Sbjct: 454 KQVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRVLAVYRSAADAMMEDGASPYQIDAA 513
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG PMGPF++ DL G + A + I + E G+ + +GF
Sbjct: 514 VRAFGFPMGPFQVVDLAGGDIGWAARKRRAATRNPAARYVQIADRLCERGWFGQKSGRGF 573
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY E R +PDPEV+ I+ R+ +G I P+ ++++I+ ++NE V
Sbjct: 574 YLYPEGSRSGTPDPEVEAIIDAERARAG--ITPR--SFTDEEIIRRYMAAMINEGANVVH 629
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D+ + G GFP YR
Sbjct: 630 ERIALRPLDVDVTFLYGYGFPRYR 653
>gi|296224758|ref|XP_002758183.1| PREDICTED: peroxisomal bifunctional enzyme [Callithrix jacchus]
Length = 722
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 273/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
++ T + + EA LG++D VV + L + A++ + LE RR L+K I+
Sbjct: 150 LITTGRHILAGEALKLGILDKVVNSDLLEEAIRFAQRVSDQPLESRR-----LFK-KPIQ 203
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + RKQ P C+ V+A V G +KE E FQ LL+S
Sbjct: 204 SLPNMDSIFGEALLKMRKQHPGCLAQEACVRAVQAAVQYPYEVGSKKEEELFQYLLQSGQ 263
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + F A+R +K G + + + V V ++G G MG GI + + PVI
Sbjct: 264 ARALQYAFLAERKANKWSSPSGASWKTASAQPVSSVGVVGLGTMGRGIVISFARARIPVI 323
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 324 AVDSDKNQLATANKIITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAV 381
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++SLK+Q+FA+L C P L +NTS++D++ I T ++G HFFSPAH+M L
Sbjct: 382 FEDMSLKKQVFAELSAVCKPEAFLCTNTSSLDVDEIASSTNRPHLVIGTHFFSPAHIMKL 441
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY + L+E G+
Sbjct: 442 LEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYSQTYFLLEEGSKP 501
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPERTYKSM----II 403
+DR + +FG MGPFR++DL G V TG P R S I
Sbjct: 502 EEVDRVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGSRRYCPIP 561
Query: 404 PIMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + KF+ + R I+P+ +S +
Sbjct: 562 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETH--HIEPRI--ISRDE 617
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EGIA +D+ + G G+P +R + + +
Sbjct: 618 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHRGGPMFYASTVGLPAVLEK 677
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 678 LQKYYRQ 684
>gi|440795856|gb|ELR16970.1| 3hydroxyacyl-CoA dehydrogenase, NAD binding domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 570
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 152/373 (40%), Positives = 217/373 (58%), Gaps = 33/373 (8%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA---PNQLVSTARQWALDILEHRRPWVATLYKTDKIE 57
MML+S+ +K +EA +LGLVD VV P QL+ A +I E RP+V TD++E
Sbjct: 217 MMLSSRSLKADEAKNLGLVDEVVGGSDPAQLIDAAITVGKEIAEGMRPFVRATQLTDRLE 276
Query: 58 PLGEAREIFKFARAQARKQAPN-LTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
PL EA++I R PN + HP C+D V+AGV G +G+ E L ++
Sbjct: 277 PLPEAKKII-----DERAYPPNTVVHPFACLDAVQAGVQMGGSSGVDAERRAVVACLYND 331
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+++ H FFA+R T+ V GVTD GL PR ++ V I+GGGLMGSGIATAL+ S V++K
Sbjct: 332 ASEAMTHAFFAERKTANVSGVTDQGLQPRPIRSVGIIGGGLMGSGIATALLFSGIAVVIK 391
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
EV+ + L+A + V ANL V++ ++T+E+ ++ +S++T L + F VDMVIEA++E
Sbjct: 392 EVSRQLLDAVVNTVTANLDRAVERRRLTREQRDRLLSMVTPTLQFADFVAVDMVIEAVVE 451
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N+ +KQ +F ++EK P CILA+NTSTI ++ I T S R++G HFFS A +
Sbjct: 452 NLKVKQDVFREVEKVVKPDCILATNTSTIPIDQIATATQSAHRMLGVHFFSHASGGDRAD 511
Query: 297 I----------VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFL 346
RT Q+ Q D ++ G VNR+FFP+ QAA L
Sbjct: 512 ARGVGAGDRGHARTGQSPAQ------DAHRR--------GQLPWITVNRIFFPFFQAASL 557
Query: 347 LVERGTDLYLIDR 359
LV+ G D Y IDR
Sbjct: 558 LVDCGVDPYRIDR 570
>gi|319764427|ref|YP_004128364.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
gi|317118988|gb|ADV01477.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Alicycliphilus
denitrificans BC]
Length = 705
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 234/430 (54%), Gaps = 7/430 (1%)
Query: 75 KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKV 134
K+ L P I+ V+A V G+++E E F + L S LVH FFA+R T+K+
Sbjct: 229 KKTRGLFSPAKIIECVKAAVQMPFAEGVKRERELFLECLNSPQRAGLVHAFFAERETAKI 288
Query: 135 PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANL 194
P APR K+AI+GGG MG+GI A + + V++ E + + + G V
Sbjct: 289 PEAK--AAAPRHFAKLAIIGGGTMGAGITVAALDAGLSVVMIERDAESIARGRKNVEKVY 346
Query: 195 QSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPP 254
+ KG+MT E T++ Y+ KDVD+VIEA+ E++ +K+ +F +L++ C
Sbjct: 347 DGLIAKGRMTAEAKAATMARYQPSTSYDDIKDVDLVIEAVFEDIEVKKAVFKELDRVCKS 406
Query: 255 HCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDI 314
+LA+NTS +D++ I T ++G HFFSPA++M LLEIV + +P V+V ++
Sbjct: 407 GAVLATNTSYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVVTAFEL 466
Query: 315 GKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLA 374
K++KK P+ G C GF NR+ Y +AA ++E G Y ID A+ +FG PMGPF+++
Sbjct: 467 AKRMKKVPVRAGVCDGFIGNRILSVYREAANYMLEDGASPYEIDAAVREFGYPMGPFQVS 526
Query: 375 DLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-RRKASPDP 433
DL G + AT + R I + E G+ T +G+YLY E R DP
Sbjct: 527 DLAGGDIGWATRKRKAATRDPRARYVEIADRIAERGWYGQKTGRGWYLYPEGARTGQQDP 586
Query: 434 EVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIAS 493
EV ++ R+ G I P+ + ++I+ +VNE +V EGIA++ D+D+
Sbjct: 587 EVLAIVDAERTKKG--ITPR--AFTHEEIMRRYMAAMVNEGAKVLEEGIALRPLDIDVTF 642
Query: 494 VMGMGFPPYR 503
+ G GFP +R
Sbjct: 643 LFGYGFPRWR 652
>gi|398812024|ref|ZP_10570805.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
gi|398079241|gb|EJL70108.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
Length = 711
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 161/504 (31%), Positives = 262/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + +EA SLGLVD + ++ +A +++ + P T ++
Sbjct: 162 LMLSGRHADAKEALSLGLVDRLGNDADALAEGLAYAQELVAAKAPVRRTREAAGLVD-TE 220
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+R + ARA K++ L P+ I+ VE + G+ E + F + + S
Sbjct: 221 ASRAALEAARADTAKKSRGLFSPMKIIEAVEGALTLPFDEGMALERKLFLQCIDSPQRAG 280
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FFA+R K P PR ++ I+GGG MG+GIA A++ + PV + E +E
Sbjct: 281 LIHAFFAEREVLKAPETK--AAKPRALESAGIVGGGTMGAGIAVAMLDAGLPVTMIERDE 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G V + KG+MT E ++ G Y++ +VD+V+EA+ E + +
Sbjct: 339 PSLARGRQHVEKVYDGLIAKGRMTPESKAAVMARFNGSTSYDALANVDIVVEAVFEEMGV 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L++ C +LA+NTS +D++ I + +VG HFFSPA++M LLEIV
Sbjct: 399 KKAVFAELDRVCKRGAVLATNTSYLDIDEIADSISRPQDVVGLHFFSPANIMKLLEIVVP 458
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ ++ KK+KK P+ G C GF NR+ Y QAA ++E G Y ID A
Sbjct: 459 AKVSADVVATGFELAKKLKKVPVRAGVCDGFIGNRILAVYRQAADHMMEDGASPYEIDAA 518
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG PMGPF+++DL G + AT + + + + E G+ T++G+
Sbjct: 519 VRNFGYPMGPFQVSDLAGGDIGWATRKRKAATRDPQARYVQVADRICERGWFGQKTQRGY 578
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY E R PDPEV I+ R +G I P+ + +E++I+ ++NE V
Sbjct: 579 YLYPEGARTGVPDPEVLAIIDAERVRAG--ITPR--QFTEEEIMRRYMAAMINEGANVVL 634
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
+ IA++ D+D+ + G GFP +R
Sbjct: 635 QRIALRPLDVDVTFLYGYGFPRHR 658
>gi|264679896|ref|YP_003279805.1| 3-hydroxyacyl-CoA dehydrogenase [Comamonas testosteroni CNB-2]
gi|262210411|gb|ACY34509.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni CNB-2]
Length = 705
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 162/507 (31%), Positives = 259/507 (51%), Gaps = 13/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHR---RPWVATLYKTDKIE 57
+ML+ + + + + GLVD + V+ +A ++L RP AT ++
Sbjct: 157 LMLSGQQIGAKAGLAAGLVDKLEEGTDPVAAGLAYARELLAQGASLRPVSAT---PGRLA 213
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A+ RA K++ L P+ ID V+A + GL+ E F + S
Sbjct: 214 DKAAAQAELDALRADTTKKSRGLFSPLKIIDCVQAALDLPFAEGLKFERAQFLACIDSPQ 273
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L+H FFA+R T+K+P PR K+AI+GGG MG+GI + + + V + E
Sbjct: 274 RAGLIHAFFAERETAKIPEAR--AAQPRAFSKIAIIGGGTMGAGITVSALDAGLVVTMIE 331
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + + G V + KG+M++E ++ T Y+ DVD+VIEA+ E+
Sbjct: 332 RDAESIARGQANVEKVYNGLIAKGRMSEEAKASIMARYTPSTRYDDIADVDLVIEAVFED 391
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ +F +L++ C +LA+NTS +D++ I T ++G HFFSPA++M LLEI
Sbjct: 392 LEVKKAVFKELDRVCKSGAVLATNTSYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEI 451
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + +P V+ ++ KK+KK P+ G C GF NR+ Y QAA L+E G Y I
Sbjct: 452 VVPAKVAPDVVTTAFELAKKMKKVPVRAGVCDGFIGNRILATYKQAADYLMEDGASPYEI 511
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ FG MGPF++ DL G + AT + + I + E+ G+ T
Sbjct: 512 DEAVRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEIADRICENGWFGQKTG 571
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+GFYLY + R PDPEV ++ R+ +GV P + ++I+ +VNE +
Sbjct: 572 RGFYLYPQGARIGQPDPEVLAIVDAERAKNGVTPRP----FTAEEIMRRYMAAMVNEGAK 627
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V EGIA++ D+D+ + G GFP +R
Sbjct: 628 VVGEGIALRPLDVDVTFISGYGFPRHR 654
>gi|330826648|ref|YP_004389951.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
gi|329312020|gb|AEB86435.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
Length = 705
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 234/430 (54%), Gaps = 7/430 (1%)
Query: 75 KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKV 134
K+ L P I+ V+A V G+++E E F + L S LVH FFA+R T+K+
Sbjct: 229 KKTRGLFSPAKIIECVKAAVQMPFAEGVKRERELFLECLNSPQRAGLVHAFFAERETAKI 288
Query: 135 PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANL 194
P APR K+AI+GGG MG+GI A + + V++ E + + + G V
Sbjct: 289 PEAR--AAAPRHFAKLAIIGGGTMGAGITVAALDAGLSVVMIERDAESIARGRKNVEKVY 346
Query: 195 QSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPP 254
+ KG+MT E T++ Y+ KDVD+VIEA+ E++ +K+ +F +L++ C
Sbjct: 347 DGLIAKGRMTAEAKAATMARYQPSTSYDDIKDVDLVIEAVFEDIEVKKAVFKELDRVCKS 406
Query: 255 HCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDI 314
+LA+NTS +D++ I T ++G HFFSPA++M LLEIV + +P V+V ++
Sbjct: 407 GAVLATNTSYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVVTAFEL 466
Query: 315 GKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLA 374
K++KK P+ G C GF NR+ Y +AA ++E G Y ID A+ +FG PMGPF+++
Sbjct: 467 AKRMKKVPVRAGVCDGFIGNRILSVYREAANYMLEDGASPYEIDAAVREFGYPMGPFQVS 526
Query: 375 DLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-RRKASPDP 433
DL G + AT + R I + E G+ T +G+YLY E R DP
Sbjct: 527 DLAGGDIGWATRKRKAATRDPRARYVEIADRIAERGWYGQKTGRGWYLYPEGARTGQQDP 586
Query: 434 EVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIAS 493
EV ++ R+ G I P+ + ++I+ +VNE +V EGIA++ D+D+
Sbjct: 587 EVLAIVDAERTKKG--ITPR--AFTHEEIMRRYMAAMVNECAKVLEEGIALRPLDIDVTF 642
Query: 494 VMGMGFPPYR 503
+ G GFP +R
Sbjct: 643 LFGYGFPRWR 652
>gi|334343134|ref|YP_004555738.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334103809|gb|AEG51232.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 703
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 269/512 (52%), Gaps = 20/512 (3%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
+L+ KPV ++A LG+VDAV + V A +A +++ + P V D+ E L E
Sbjct: 156 VLSGKPVGAKQALELGIVDAVEDGDPAVIGA-AFARRVIDEKIPAVPV---RDRDEKLAE 211
Query: 62 AREIFKFARAQARK---QAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R A A+K ++ P ID + G + +A ++L+
Sbjct: 212 TRADPSDFDALAKKLTARSKGQLAPQANIDSIRRSFTMGLDEAMAVDAVANRELMAGSQS 271
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
++L H+FFA+R +++PG+ + A R VKK AI+G G MG GIA + V + +
Sbjct: 272 RALRHLFFAEREAARIPGLPETAKA-RPVKKAAIIGAGTMGGGIAMCFAGAGIAVTVIDT 330
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ L+ G+ RVR N + VK+G + Q + ++ ++L+TG D + D D+VIEA+ E++
Sbjct: 331 TQDALDRGLDRVRGNYATSVKRGSIAQAQMDERLALITGATDRAAAADADIVIEAVFEDM 390
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K++IF+DLEK P ILASNTS +D++ I + VG HFFSPA+VM LLE+V
Sbjct: 391 DVKKEIFSDLEKRVKPGTILASNTSALDVDEIASVLERPEDFVGMHFFSPANVMKLLEVV 450
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
+SP I+ + +GK I K + GNC GF NRM + A L+++G +D
Sbjct: 451 VAKHSSPDAILTAMAVGKAIGKVSVWSGNCDGFIGNRMVAKRSAQAERLLQQGAFPQQVD 510
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+T G PMGP D+ G + + + FP I + E R G+ T
Sbjct: 511 AALTNLGFPMGPLTTNDMSGLDIGYSIRKRRGTPFP-------IADAIVESGRLGQKTGA 563
Query: 419 GFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y+ R P+PE + I G+A ++E+++V+ + FP++NE R+
Sbjct: 564 GYYRYEPGDRTPHPNPETEALIIATSEKMGIA----RRDIAEEEMVQRLLFPLINEGARI 619
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYRFVTFIH 509
EGIA++A+D+D+ + G G+P + H
Sbjct: 620 LEEGIALRASDVDLVWINGYGWPRHLGGPMFH 651
>gi|78067690|ref|YP_370459.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. 383]
gi|77968435|gb|ABB09815.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia sp. 383]
Length = 710
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 260/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + V +EA +LGLVD V + ++ +A +++ P V +
Sbjct: 161 LMLTGRHVSADEALALGLVDRVAHSDDTLAEGLAYAQELVSLGAP-VRRTRDAQGLVDRA 219
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ ARA+ K++ L P +D VEA + AG+ E F + + S
Sbjct: 220 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALTQSFDAGMAFERSLFLQCIDSPQRAG 279
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R +K P + R V+++ ++GGG MG+GIA + + + PV + E +E
Sbjct: 280 LVHAFFAEREAAKAP--ESRRASARPVERIGVVGGGTMGAGIAVSALDAGLPVTMIERDE 337
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G V V KG+MT ++ G Y++ D+VIEA+ E++++
Sbjct: 338 ASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGGTSYDALAQADVVIEAVFEDMAV 397
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA+VM LLEIV
Sbjct: 398 KKAVFAELARVCKPGAVLATNTSYLDIDELAASIDRPADVIGLHFFSPANVMKLLEIVVP 457
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ + K++KKTP+ G C GF NR+ Y AA L+E G Y IDRA
Sbjct: 458 ARVSADVVATAFALAKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 517
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ +FG PMGPF++ DL G + AT + R I + E G+ T +G+
Sbjct: 518 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTARGY 577
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ + + R+ GV P+ ++ +I+ ++NE V
Sbjct: 578 YLYPDGARVGTPDPEVETIVAEERAKKGVT--PR--TFTDDEIMRRYLAAMINEGANVVH 633
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP YR
Sbjct: 634 EKIALRPLDVDAVFLYGYGFPRYR 657
>gi|374367960|ref|ZP_09626016.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
OR16]
gi|373100473|gb|EHP41538.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
OR16]
Length = 693
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 173/515 (33%), Positives = 263/515 (51%), Gaps = 27/515 (5%)
Query: 16 LGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREIF-KFARAQAR 74
+GL D V L + A + + +RP +K+E E+F F RA AR
Sbjct: 170 MGLFDLVTDDAALRADAIAFVKQVNAEQRPLRKVRDLNEKVEAARGKPELFADFRRANAR 229
Query: 75 K----QAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRG 130
K AP + I CI EA V G++ E + F L+ + + FFA R
Sbjct: 230 KFRGFDAPE--YNIRCI---EAAVNLPFDEGMKVERKLFLALMNGTQSAAQRYYFFASRQ 284
Query: 131 TSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRV 190
+P V VKKV I+G G MG GIA L+ + PV++ E ++ L+ G+ +
Sbjct: 285 VWNLPDVP-ADTPTIDVKKVGIIGAGTMGGGIAMNLLNAGVPVVIVETAQEALDRGMRTI 343
Query: 191 RANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEK 250
RAN + KG++T +K ++LLT L+ D D+VIEA+ EN+ +K+ IF L+K
Sbjct: 344 RANYDNTASKGRITAADVDKRMALLTPTLELGQLADADLVIEAVYENMDVKKDIFGKLDK 403
Query: 251 YCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVD 310
ILA+NTS +D+N I T + ++G HFFSPA+VM LLE+VR ++TS VI
Sbjct: 404 IVKRGAILATNTSALDVNEIAAATSRPESVIGLHFFSPANVMKLLEVVRGDKTSKPVIRT 463
Query: 311 LLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGP 370
+++ +KI K +VG C GF NRM + A LV G + IDR + FG PMGP
Sbjct: 464 SMELARKIGKIAALVGVCPGFVGNRMLAQRQREAQKLVLEGALPWDIDRVLYNFGFPMGP 523
Query: 371 FRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDERRKAS 430
F ++DL G + E++ + + I+ E R G+ T G+Y YD++R A
Sbjct: 524 FAMSDLAGLDLGW---------IREKSSSATLREILCEMDRRGQKTGAGYYDYDDKRNAI 574
Query: 431 PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLD 490
P P V++ I + G+ +SE++I+E + ++NE ++ EG A++A+D+D
Sbjct: 575 PSPVVEQIIRDFAARKGMT----SRVVSEQEILERCVYTMINEGAKILEEGKAIRASDID 630
Query: 491 IASVMGMGFPPYRFVTFIHR---GFSKSSSCFKNL 522
+ V G G+P YR + G K + KN
Sbjct: 631 VVWVNGYGWPVYRGGPMFYADTIGLDKVLAAMKNF 665
>gi|359394875|ref|ZP_09187928.1| hypothetical protein KUC_1526 [Halomonas boliviensis LC1]
gi|357972122|gb|EHJ94567.1| hypothetical protein KUC_1526 [Halomonas boliviensis LC1]
Length = 699
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 169/516 (32%), Positives = 268/516 (51%), Gaps = 34/516 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ KP+ +AH +GLVD ++ + ++ + +L + A Y+ K +PL
Sbjct: 160 MIVSGKPITALDAHKVGLVDELLHATEGEASDTEAFDQVLAY-----ANRYQGGK-QPLA 213
Query: 61 EAREIFK-------------FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAE 107
E R++ AR + AP V +VV AG+ E
Sbjct: 214 E-RDVPPADEQALQVQVNKLLARTRGLPAAP------VAAEVVMQAATHSFSAGIADERA 266
Query: 108 DFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALI 167
F L SE+ ++L ++FFA+R + P + +V +++++G G MGSGIA +
Sbjct: 267 QFLALRGSESAQALRYLFFAER---EKPFEPTQHVQAAQVSRISVVGAGTMGSGIALCAL 323
Query: 168 LSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDV 227
+ Y V L E+N+K LEAG+ R+ L VK+ +TQ + + ++S L
Sbjct: 324 NAGYSVDLLELNDKALEAGVARITQALDEGVKRQLLTQAQRDSSLSRLKPTQQLPEVAGT 383
Query: 228 DMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFS 287
D+VIEAI+E++++K+ +FADL K+ +LASNTS +D++ I E +R++G HFFS
Sbjct: 384 DLVIEAIVEDLAIKRSLFADLAKWVSESTLLASNTSYLDIDQIAEGIPHPERVLGLHFFS 443
Query: 288 PAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLL 347
PA MPL+EIVR TS Q + + + +++KK IVV N GF NR++ Y + +
Sbjct: 444 PADRMPLMEIVRCQITSEQTLSTAVSVARRLKKKAIVVANSWGFVGNRLYAAYRRQCEFM 503
Query: 348 VERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQ 407
+E G ID A+ +G MGPF++AD+ G +A Q + R Y I ++
Sbjct: 504 LEEGASPEQIDAALEAYGFAMGPFKVADMSGLDIAWKMRQQTADTRHLRRYVG-IPDLIC 562
Query: 408 EDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
E R G T G+Y YD + + DP+V + I R AI P+ SE+DI +
Sbjct: 563 EAGRLGRKTGSGYYRYDNTMQPASDPKVAQLIAHYREEH--AITPQ--AFSEQDIQQRAV 618
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++NEA + EG+ + AD+DIA V G GFP +R
Sbjct: 619 HALINEALLLLEEGVCQRPADIDIALVNGYGFPRWR 654
>gi|407714172|ref|YP_006834737.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
BR3459a]
gi|407236356|gb|AFT86555.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
BR3459a]
Length = 734
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 262/507 (51%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + +EA +LGLVD + A +++ +A +L AT +T L
Sbjct: 185 LMLSGRHASAKEALALGLVDRLGASGDILAEGLAYAHALLAA----HATARRTRDAAALS 240
Query: 61 E---AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ + AR + K++ L P+ +D VEA V GL+ E + F + L S
Sbjct: 241 DRAASLAALAAARTETEKKSRGLFSPLKIVDAVEAAVTQPFEEGLRVERQLFLQCLDSPQ 300
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
LVH FFA+R K P D PR ++ + ++GGG MG+GIA A++ + PV + E
Sbjct: 301 RAGLVHAFFAEREVLKAPETRDA--KPRALEAIGVVGGGTMGAGIAVAVLDAGLPVTMIE 358
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+E L G + + KG+M+ K + ++ TG YE+ + D+VIEA+ E+
Sbjct: 359 RDEASLARGRAHIEKVYDGLIAKGRMSAAKKAELMARWTGSTSYEALANADLVIEAVFED 418
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++K+ +FA+L++ C +LA+NTS +D++ I ++G HFFSPA++M LLE+
Sbjct: 419 LAVKKAVFAELDRVCKAGAVLATNTSYLDIDAIAASISRPADVIGLHFFSPANIMKLLEV 478
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V S V+ ++ KK++KTP+ G C GF NR+ Y AA ++E G Y I
Sbjct: 479 VVPRAVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRILAVYRSAADAMMEDGASPYQI 538
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ FG PMGPF++ DL G + A + I + E G+ T
Sbjct: 539 DAAVRAFGFPMGPFQVVDLAGGDIGWAARKRRAATRNPAARYVQIADRLCERGWFGQKTG 598
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+GFYLY E R PDPEV+ I+ R+ +G I P+ ++ I+ ++NE
Sbjct: 599 RGFYLYPEGSRSGQPDPEVEAIIDAERARAG--ITPR--SFTDDKIMRRYMAAMINEGAN 654
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V E IA++ D+D+ + G GFP YR
Sbjct: 655 VVHERIALRPLDVDVTFLYGYGFPRYR 681
>gi|262196642|ref|YP_003267851.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Haliangium
ochraceum DSM 14365]
gi|262079989|gb|ACY15958.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Haliangium
ochraceum DSM 14365]
Length = 752
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 269/534 (50%), Gaps = 44/534 (8%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRP-------------WV 47
M+LT K ++ ++A +LGLVD VV L ARQ AL + E R
Sbjct: 169 MILTGKRLRAKKARALGLVDLVVPAAVLERAARQHALQLAEARAALRKQRAGKGALSRMA 228
Query: 48 ATLYKTDK-IEPLGEARE------------IFKFARAQ--ARKQAPNLTHPIVCIDVVEA 92
AT+ + + + G+ +E +F AR + A+ Q N P ++ +
Sbjct: 229 ATMREAVRGVNLSGDLQELVLEDNRLGRKVVFDTARKKLLAKTQG-NYPAPEKALEAMRL 287
Query: 93 GVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLA--PRRVKKV 150
G P G EA F +L S L+ IF A K GV+ G PR V+KV
Sbjct: 288 GAAK-PEDGYAAEARFFGELAVSPEANELIQIFLATTALKKDSGVSGQGAEARPRPVRKV 346
Query: 151 AILGGGLMGSGIA-TALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFE 209
A+LG GLMG+GIA + + V LK+ + + G+ VR + ++K+ +++ +
Sbjct: 347 AMLGAGLMGAGIAYVSAAKAGAQVRLKDRDPASVGRGLRAVREIVDGQLKRKRLSARQRL 406
Query: 210 KTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNL 269
+ ++ +T DY F D D++IEA+ E+++LK++I A++E C P I ASNTSTI +
Sbjct: 407 ELMNRVTPTTDYSGFGDADVIIEAVFEDLALKRRIVAEVEAACGPETIFASNTSTIPIGR 466
Query: 270 IGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCT 329
I E + + ++G H+FSP MPLLEI+ T QT+P V + +GK KT IVV +
Sbjct: 467 IAEASTRPETVIGMHYFSPVDKMPLLEIIVTEQTAPWVTATCVALGKAQGKTVIVVRDSV 526
Query: 330 GFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQF 389
GF +R+ PY AF ++ G + IDRA+ FG P+GP +L D VG VA G
Sbjct: 527 GFYTSRILGPYMNEAFHILAEGVSVERIDRALVDFGFPVGPVKLLDEVGVDVAHKAGTVM 586
Query: 390 IENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVA 449
E F ER + + +D+R G ++GFYLY ++K D + GVA
Sbjct: 587 REAFGERMDAPPGMERLIDDERLGRKNQRGFYLYGGKKKGVDD--------SVYELLGVA 638
Query: 450 IDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ A +I E +VNEA F EG+ A D DI ++ G+GFPP+R
Sbjct: 639 PGRETAA---DEIAERCALQMVNEAAHCFGEGVLRSARDGDIGAIFGLGFPPFR 689
>gi|85372891|ref|YP_456953.1| fatty oxidation complex subunit alpha [Erythrobacter litoralis
HTCC2594]
gi|84785974|gb|ABC62156.1| fatty oxidation complex, alpha subunit [Erythrobacter litoralis
HTCC2594]
Length = 678
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/504 (31%), Positives = 260/504 (51%), Gaps = 21/504 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVA--TLYKTDKIEP 58
M++ P+ +A ++GLVD +V + L + A +A + + P + T ++ P
Sbjct: 152 MVVNGNPIPAAKAEAIGLVDKIVGEDSLEADAIAFAREQIGKPVPRSSEGTAHEDGVKNP 211
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
++F RA+ ++ P + V+A G++KE E F L+
Sbjct: 212 -----DLFDEFRARNARKIRGFDAPDAAVKAVKAATERPYAEGVKKERELFTGLMSGTQS 266
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
++ H FFA+R +K+ V D ++KV ++G G MG GIA + + PV + E+
Sbjct: 267 AAMRHYFFAERAANKIDNV-DPKTPLIDIQKVGVIGAGTMGGGIAMNFLSAGIPVTILEM 325
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ L+ G G + N + KKG+M E+ E+ + LL LDY D D+VIEA+ EN+
Sbjct: 326 KQDALDRGTGVIAKNYERTAKKGRMKPEQVEQAMGLLNPTLDYADLADCDLVIEAVYENM 385
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+++FA L++ ILASNTS ++++ I + T ++G HFFSPA+VM LLEIV
Sbjct: 386 DVKKEVFAKLDETVKQGAILASNTSYLNIDEIAQATKRPGYVLGLHFFSPANVMKLLEIV 445
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +T V++ + + KKI K +V G C GF NRM P + A L+ G + +D
Sbjct: 446 RGAETRDDVLLTSMKLAKKIGKVAVVAGVCDGFIGNRMLSPRQKQANELIMEGAKYWEVD 505
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+ +FG PMGPF++ADL G + + E + +R G+ K
Sbjct: 506 DVLLEFGFPMGPFQMADLAGIDIGWHRDPSKVTTIREALCAA---------ERFGQKNGK 556
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY YDE R+ +P EV+ I G + +S+ +I E + +P+VNE +
Sbjct: 557 GFYDYDEARQRTPSEEVQAIIADFARKEGT----EQRDISKDEIRERLLYPMVNEGAMIL 612
Query: 479 AEGIAVKAADLDIASVMGMGFPPY 502
EG+A +A+D+D+ + G G+P Y
Sbjct: 613 DEGMAQRASDIDVVWINGYGWPLY 636
>gi|89092152|ref|ZP_01165107.1| fatty-acid oxidation complex alpha-subunit [Neptuniibacter
caesariensis]
gi|89083887|gb|EAR63104.1| fatty-acid oxidation complex alpha-subunit [Oceanospirillum sp.
MED92]
Length = 719
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/504 (30%), Positives = 256/504 (50%), Gaps = 19/504 (3%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKF 68
+ + A + G VD+VVAP+Q+ + A + + + A + L + ++ F
Sbjct: 175 RADAALTDGAVDSVVAPDQVAAAALDLIKNCNAGKFDYAARREEKKSPIKLNQIEQMMAF 234
Query: 69 ARAQA---RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
A+ K P+ P+ + ++ ++ EA+ F K+ ++E C SLV +F
Sbjct: 235 ESAKGVIGGKAGPHYPAPMAALKAIQKHANLPRDKAIEVEAKGFVKVAKTEVCASLVGLF 294
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
+ KV + P VKK A+LG G+MG G+A P+++K++N+ L+
Sbjct: 295 MKDQYVKKVSKSFESKAEP--VKKAAVLGAGIMGGGVAYQSASKGTPILMKDINDAALDL 352
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
G+ L RV +G+M K ++ +T L+Y F VD+V+EA++EN ++K+ +
Sbjct: 353 GLDEATKLLNKRVSRGRMDAMKMASVLNKITPTLNYGDFGSVDLVVEAVVENPNVKKAVL 412
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
A++E P +L SNTSTI + + + G HFF+P H MPL+E++R +TS
Sbjct: 413 AEVEGELPEGAVLTSNTSTISITELATALKKPENFCGMHFFNPVHQMPLVEVIRGEKTSE 472
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
+ + + K + KTPIVV +C GF VNR+ FPY LV G + ID+ + +FG
Sbjct: 473 EAVARTVAYAKAMGKTPIVVNDCPGFLVNRVLFPYFGGFSALVSDGANFQQIDKVMERFG 532
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPER-TYKS-MIIPIMQEDKRAGETTRKGFYLY 423
PMGP L D+VG A E FP+R T++ I M + +R G+ KGFY Y
Sbjct: 533 WPMGPAYLLDVVGIDTAHHADAVMAEGFPDRMTHEGENAIDRMYKLERFGQKNSKGFYRY 592
Query: 424 DERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
+ RK P D EV ++ V +P+ + S+++I+ + P+ E R
Sbjct: 593 ELDRKGKPKKLADEEVPAL------LADVVAEPR--EFSDEEIIARMMIPLCIETVRCLE 644
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
+GI A+ D+ + G+GFPP+R
Sbjct: 645 DGIVATPAEADMGLIYGIGFPPFR 668
>gi|326318994|ref|YP_004236666.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323375830|gb|ADX48099.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 710
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 257/507 (50%), Gaps = 15/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML+ KP+ + A + GLVD +V + V+ L ++ + A L +T +
Sbjct: 158 MMLSGKPLSAKAALAAGLVDRLVDGSDPVAAG----LACVQELQSAQAPLRRTRDVAIAD 213
Query: 61 EAR---EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+A E+ A A K++ L P ++ V V G+Q+E F + L S
Sbjct: 214 KAAAMAELDALA-ADTAKKSRGLFSPQKIVECVRNAVELDFDEGMQRERAAFMECLASPQ 272
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L+H FFA+R +KVP APR + +AI+GGG MG+GI + + + PV + E
Sbjct: 273 RAGLIHAFFAEREVAKVPEAK--AAAPRPITSIAIIGGGTMGAGITVSALDAGLPVTMIE 330
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ L G V V KG+MT + ++ TG YE D+VIEA+ E+
Sbjct: 331 RDDASLARGRAHVEKVYDGLVAKGRMTADAKAAVMARYTGSTRYEDIAAADLVIEAVFED 390
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ +F +L++ C P +LA+NTS +D++ I T ++G HFFSPA++M LLEI
Sbjct: 391 LEVKKAVFRELDRVCKPGAVLATNTSYLDIDAIAAATQRPQDVIGLHFFSPANIMKLLEI 450
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + S V+ + + +KK P+ G C GF NR+ Y QAA L+E G Y I
Sbjct: 451 VVPAKVSADVVATAFALARTMKKVPVRAGVCDGFIGNRILAVYKQAADYLMEDGASPYEI 510
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ FG PMGPF++ DL G + AT + I + E G+ T
Sbjct: 511 DAAVRGFGYPMGPFQVTDLAGGDIGWATRKRRAATRDPNARYVEIADRICERGWFGQKTG 570
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+GFYLY E R PDPEV ++ R+ GV P+ + +I+ +VNE +
Sbjct: 571 RGFYLYPEGARTGQPDPEVLAIVDAERAKKGVV--PR--SFTPHEIMRRYMAAMVNEGAK 626
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V EGIA++ D+D+ + G GFP +R
Sbjct: 627 VVEEGIALRPLDVDVTFLSGYGFPRFR 653
>gi|354724370|ref|ZP_09038585.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter mori LMG 25706]
Length = 715
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 174/511 (34%), Positives = 262/511 (51%), Gaps = 28/511 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LT K ++ +A +GLVD VV + L+ A + AL + +RP + + PLG
Sbjct: 167 MILTGKQLRARQALKVGLVDEVVPHSILLEAAVELALKGRQAKRPL--PVRERVLAGPLG 224
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A ++ +K N ++V+E G+ G +G EA+ F +L + ++
Sbjct: 225 RALLFNMVSKKTEQKTKGNYPAAKRILEVIETGLSQGSSSGYAAEAKAFGELAMTPQSQA 284
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L IFFA K PG ++ AP R V G G TA PV +K++N
Sbjct: 285 LRSIFFASIDVKKDPG-SEAEPAPLRAVGVLGGGLMGGGIAFVTA-SKGKLPVRIKDINP 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
K + + NL +VK+ + + +KT+S++TG DY F D+VIEA+ E+++L
Sbjct: 343 KGINHALQYSWQNLDQKVKRRHIKASERDKTLSMITGTTDYRGFAHRDLVIEAVFEDLAL 402
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQ+ AD+E++C PH I ASNTS++ + I + ++++G HFFSP MPL+E++
Sbjct: 403 KQQMVADVEQHCAPHTIFASNTSSLPIGDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPH 462
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TSPQ + ++ + KK KTPIVV + GF VNR+ PY A L+ G + +D A
Sbjct: 463 ATTSPQTVATVVKLAKKQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEA 522
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY------KSMIIPIMQEDKRAGE 414
+ KFG P+GP +L D VG I TG + I E Y + I+ + +D R G
Sbjct: 523 LVKFGFPVGPIQLLDEVG----IDTGTKIIPVL-EAAYGDRFSPPANIVSAILKDDRKGR 577
Query: 415 TTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
+GFYLY + + S DP V I S++G KLS E ++
Sbjct: 578 KNERGFYLYGAKGRKSKKQVDPAVYGLI----SVTGQ------GKLSSAQCAERCVMMML 627
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
NEA R F E + A D DI +V G+GFPP+
Sbjct: 628 NEAARCFGEQVIRSARDGDIGAVFGIGFPPF 658
>gi|46309503|ref|NP_996951.1| peroxisomal bifunctional enzyme [Danio rerio]
gi|82185947|sp|Q6NYL3.1|ECHP_DANRE RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|42542964|gb|AAH66545.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Danio rerio]
Length = 718
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 272/523 (52%), Gaps = 37/523 (7%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDI----LEHRRPWVATLYKTDKI 56
++ T + V +EA LG+VD V N A ++AL L RR + T +
Sbjct: 150 LITTGRHVSAQEALKLGMVDQVTEQNT-CEVALEFALKAVGKPLSSRRLSMLTTPCPPGL 208
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
+ IF+ A Q +K+A + P+ C+ V A + G+++E E L S
Sbjct: 209 D------GIFEAATMQVQKKARGVMAPLACVQAVRAATLPYSE-GIKREGELMATLFSSG 261
Query: 117 TCKSLVHIFFAQRGTSK--VP-GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
++L + FFAQR K +P G PR ++ A++G G MG GI +L V
Sbjct: 262 QAQALQYSFFAQRTAEKWTLPSGAQWNNSKPREIQSAAVIGLGTMGRGIVVSLARVGISV 321
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
I E +K LE G V L+ K+ ++ +++LL L + KDVD+VIEA
Sbjct: 322 IAVESEKKLLETGRQMVIGMLERDAKRRGVS-----ASLNLLKFSLSLQDLKDVDLVIEA 376
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
+ E+++LK+QIF +L + C P +L SNTS +D++ + + T + G HFFSPAHVM
Sbjct: 377 VFEDMALKKQIFRELSRVCRPATLLCSNTSGLDVDALADVTDRPQLVAGMHFFSPAHVMK 436
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
LLE+V ++S + I + +GK++ K + VGNC GF NRM PY + A L+E G
Sbjct: 437 LLEVVCGPRSSKEAIATAMSLGKRMGKVSVAVGNCPGFVGNRMLMPYLEQATFLLEEGAT 496
Query: 354 LYLIDRAITKFGMPMGPFRLADL----VGFGVAIATGMQFIE----NFPERTYKSMIIPI 405
ID+A+ FG MG FR++DL VG+ V +G+ + + P R PI
Sbjct: 497 PQQIDKALEDFGFAMGVFRMSDLAGLDVGWRVRKESGLTGPDVDPKDPPRRRQGRKYCPI 556
Query: 406 ---MQEDKRAGETTRKGFYLYDE--RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEK 460
+ + R G+ T +G+Y+YD+ A PDP ++ +E RS G I P+ K++++
Sbjct: 557 PDMVCQQGRFGQKTGRGWYMYDKPGDTNAKPDPLIQNLLETYRSRYG--IQPR--KITDQ 612
Query: 461 DIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+I+E F + NE R+ + IA + D+D+ + G GFP +R
Sbjct: 613 EIIERCLFALANEGFRILKDKIAGQPEDIDVIYLFGYGFPRHR 655
>gi|68989263|ref|NP_001957.2| peroxisomal bifunctional enzyme isoform 1 [Homo sapiens]
gi|223590229|sp|Q08426.3|ECHP_HUMAN RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|62021246|gb|AAH38948.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Homo sapiens]
gi|62898652|dbj|BAD97180.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
variant [Homo sapiens]
gi|83405887|gb|AAI10461.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Homo sapiens]
gi|119598635|gb|EAW78229.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase,
isoform CRA_b [Homo sapiens]
gi|119598636|gb|EAW78230.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase,
isoform CRA_b [Homo sapiens]
gi|159032526|emb|CAD22483.1| L-3-hydroxyacyl-CoA dehydrogenase [Homo sapiens]
Length = 723
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 274/547 (50%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D VV + + + A++ + LE RR I+
Sbjct: 151 LITSGRRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRR------LCNKPIQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + R+Q P C+ V+A V G++KE E F LL+S
Sbjct: 205 SLPNMDSIFSEALLKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + FFA+R +K G + + R V V ++G G MG GI + + PVI
Sbjct: 265 ARALQYAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 325 AVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E +SLK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 383 FEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY A+ L+E G+
Sbjct: 443 LEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG MGPFR++DL G V TG + P R + IP
Sbjct: 503 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLLPGTPARKRGNRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDE--RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + KF+ + R I+P+ +S+ +
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSRYRKTH--HIEPR--TISQDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EGIA +D+ + G G+P ++ + + +
Sbjct: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 679 LQKYYRQ 685
>gi|347735378|ref|ZP_08868262.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Azospirillum amazonense Y2]
gi|346921425|gb|EGY02151.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Azospirillum amazonense Y2]
Length = 514
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/436 (34%), Positives = 243/436 (55%), Gaps = 13/436 (2%)
Query: 80 LTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTD 139
L P+ CI+ V A V GLQ+E F++L+ + K+L + FFA+R +++ G++
Sbjct: 43 LPAPLACIEAVRAAVELPFSQGLQREFNLFRELVVTPESKALQYAFFAERRAARIDGLSP 102
Query: 140 LGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVK 199
+ PR +++VA++G G MG+GIAT + + VIL + +E ++ G+ + + V
Sbjct: 103 -DVQPRAIERVAVIGAGTMGAGIATVAVNAGLEVILLDRDETGVQKGLAGITKGYDAAVA 161
Query: 200 KGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILA 259
KG+M + ++ + L D + VD+VIEA E++ +KQ IF L+K C P ILA
Sbjct: 162 KGRMDGAERDRRLGRLHTATDLAACAAVDLVIEAAFEDMGVKQDIFRTLDKVCGPDTILA 221
Query: 260 SNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIK 319
SNTST+DL+ I T +VG HFFSPA VM LLE+VR +T+P+V+ + + +K+
Sbjct: 222 SNTSTLDLDAIAAVTSRPQSVVGLHFFSPAPVMRLLEVVRGAETAPEVLATAMALSRKLG 281
Query: 320 KTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVG- 378
K +V G C GF NRM Y + A+ LV+ G + +D A+ ++GM MGPF + DL G
Sbjct: 282 KVGVVAGVCNGFIGNRMVEEYLRQAYFLVDEGVLPWQVDGALERWGMAMGPFAMMDLAGN 341
Query: 379 -FGVAIATGMQFI-ENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDERRKA-SPDPEV 435
G AI G + + + P T+ I + R G+ T KG+Y YD +A DPEV
Sbjct: 342 DIGRAIRAGRKALGDERPYSTFPDKICAL----GRFGQKTGKGYYQYDPATRARETDPEV 397
Query: 436 KKFIE-KARSMSG-VAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIAS 493
+ A+ ++ + P+ + +++IV + NE + EGIA +A+D+D+
Sbjct: 398 DALAQAHAKEVAQEFGLSPRV--IGDEEIVARCLLALANEGAALLGEGIAQRASDIDVVY 455
Query: 494 VMGMGFPPYRFVTFIH 509
+ G GFP ++ H
Sbjct: 456 LNGYGFPAHKGGPMFH 471
>gi|261878539|ref|NP_001159887.1| peroxisomal bifunctional enzyme isoform 2 [Homo sapiens]
gi|194376928|dbj|BAG63025.1| unnamed protein product [Homo sapiens]
Length = 627
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 274/547 (50%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D VV + + + A++ + LE RR I+
Sbjct: 55 LITSGRRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRR------LCNKPIQ 108
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + R+Q P C+ V+A V G++KE E F LL+S
Sbjct: 109 SLPNMDSIFSEALLKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQ 168
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + FFA+R +K G + + R V V ++G G MG GI + + PVI
Sbjct: 169 ARALQYAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVI 228
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 229 AVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAV 286
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E +SLK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 287 FEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKL 346
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY A+ L+E G+
Sbjct: 347 LEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKP 406
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG MGPFR++DL G V TG + P R + IP
Sbjct: 407 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLLPGTPARKRGNRRYCPIP 466
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + KF+ + R I+P+ +S+ +
Sbjct: 467 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSRYRKTH--HIEPR--TISQDE 522
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EGIA +D+ + G G+P ++ + + +
Sbjct: 523 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 582
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 583 LQKYYRQ 589
>gi|167835270|ref|ZP_02462153.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia thailandensis MSMB43]
Length = 488
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 235/436 (53%), Gaps = 7/436 (1%)
Query: 69 ARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQ 128
ARA K++ L P +D V A + GL+ E F + L S LVH FFA+
Sbjct: 6 ARADVAKKSRGLFSPAKIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAE 65
Query: 129 RGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIG 188
R +K P APR ++++ ++GGG MG+GIA A + + +PV + E ++ LE G
Sbjct: 66 REAAKSPETRRA--APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRA 123
Query: 189 RVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADL 248
V V KG+MT ++ LTG YE+ D+VIEA+ E++++K+ +FA+L
Sbjct: 124 HVEKVYAGLVAKGRMTPAAQAARLARLTGGTSYEALAQADVVIEAVFEDMAVKKAVFAEL 183
Query: 249 EKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVI 308
+ C P +LA+NTS +D++ + ++G HFFSPA++M LLE+V + S V+
Sbjct: 184 ARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVV 243
Query: 309 VDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPM 368
++ KK+KK P+ G C GF NR+ Y AA ++E G Y IDRAI +FG PM
Sbjct: 244 ATAFELAKKLKKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYRIDRAIREFGFPM 303
Query: 369 GPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERR 427
GP+++ DL G + AT + R I + E G+ T +G+YLY D R
Sbjct: 304 GPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGAR 363
Query: 428 KASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAA 487
+PDPEV+ I + R+ GV+ P+ ++ +IV ++NE V E IA++
Sbjct: 364 VGTPDPEVEAIIAEERAKKGVS--PR--AFTDDEIVRRYLAAMINEGANVVHERIALRPL 419
Query: 488 DLDIASVMGMGFPPYR 503
D+D + G GFP +R
Sbjct: 420 DVDAVFLHGYGFPRHR 435
>gi|83950253|ref|ZP_00958986.1| 3-hydroxyacyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
gi|83838152|gb|EAP77448.1| 3-hydroxyacyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
Length = 653
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/508 (31%), Positives = 260/508 (51%), Gaps = 21/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHR--RPWVATLYKTDKIEP 58
M+ KPV +A +GL+DA+ + ++ ALD L R P L P
Sbjct: 150 MISGGKPVTAPKALDIGLIDALAEGDL-----QEAALDFLRARLDAPLPTPLRHRQPHAP 204
Query: 59 LGEAREIFKFAR--AQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
A + R A+AR QA P+ ++ +E + L +E + F +L
Sbjct: 205 RDAADWDKRRQRLHARARGQAA----PLAALEAIETALKEPADLALARERDSFLRLKSHP 260
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+L H+FFA+R ++P + D+ P + ++ ++GGG MG+GIATA +L++ PV L
Sbjct: 261 ESAALRHVFFAERAAGQMPRLKDVTPGP--LTQIGVIGGGTMGAGIATACLLADLPVTLI 318
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E + EAG RV +L + + ++ +S L DY + D+VIEA+ E
Sbjct: 319 ERDAAACEAGRARVTDSLDGARARRLIDADRHATLLSQLATDTDYAALTGADLVIEAVFE 378
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++ LK +FA L+ + P CILASNTS +D+N I T DR++G HFFSPAHVM LLE
Sbjct: 379 DMDLKHAVFAALDAHTRPDCILASNTSYLDINDIARATAQPDRVIGLHFFSPAHVMKLLE 438
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++ T++ S + + +GK+++K + G C GF NR+ Y + +++ G
Sbjct: 439 LIVTDRASDRALATGFALGKRLRKLTVPAGVCDGFIGNRILSSYRRDTDAILQDGATPSQ 498
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTYKSMIIPIMQEDKRAGET 415
ID+A+ FG PMG F + DL G ++ A + P Y I + E R G
Sbjct: 499 IDQAMRDFGFPMGIFEMQDLAGLDISWAMRKRRAATRDPSERYVD-IADTLCEAGRFGRK 557
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
T +G+YLY++ + PDPEV++ ++ + +G+ S+ +I+ I + E
Sbjct: 558 TGRGWYLYEDGKTPIPDPEVEEIARQSAAAAGI----TRRSFSDDEIISRILATMQREGE 613
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E IA +A+D+D+ + G GFP +R
Sbjct: 614 EILNENIAERASDIDVVMINGYGFPRWR 641
>gi|57110042|ref|XP_545234.1| PREDICTED: peroxisomal bifunctional enzyme [Canis lupus familiaris]
Length = 723
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 272/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + V +EA LG++D +V + + + A++ + LE RR I+
Sbjct: 151 LITSGRHVLADEALKLGILDEIVNSDPVEEAIKLAQRISDQSLESRR------LCNKPIQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + +KQ P P C+ V+A V G+QKE E F L +S
Sbjct: 205 SLPNMESIFSEALLKMQKQHPGCLAPETCVRAVQAAVHCPYEVGIQKEKELFMYLQKSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + FFA+R +K G + + + V ++G G MG GI +L + PVI
Sbjct: 265 ARALQYAFFAERNATKWSTPSGASWKTAIAQPISSVGVVGLGTMGRGIVVSLAKAKIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
E ++K LE + L+ K + + LT + + VD+VIEA+
Sbjct: 325 AVESDKKQLETADMIITTLLEKEASKMQRSSHPSLGPKPRLTTSM--KELGGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E ++LK+++FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 383 FEEINLKKRVFAELSAICKPEAFLCTNTSALDIDEIASSTDRPHLVIGTHFFSPAHVMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LEI+ + +SP I ++++ KKIKK +VVGNC GF NRM PY + L+E G+
Sbjct: 443 LEIIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLKPYYNQTYFLLEEGSRP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
ID+ + +FG MGPFR++DL G V TG P R + IP
Sbjct: 503 EEIDQVLEEFGFKMGPFRVSDLAGLDVGWKSRQGQGLTGPMVPSGTPARKRGNRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + +F+ + R I+P+ +S+ +
Sbjct: 563 DLLCESGRFGQKTGKGWYQYDKPLGRIHKPDPWLSEFLSQYRKT--YHIEPRI--ISQDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EG+A +D+ + G G+P +R + + +
Sbjct: 619 ILERCLYSLINEAFRILGEGMATDPEHIDVVYLHGYGWPRHRGGPMFYASTVGLPTVLEK 678
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 679 LQKYYRQ 685
>gi|421475833|ref|ZP_15923767.1| 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein,
partial [Burkholderia multivorans CF2]
gi|400229573|gb|EJO59416.1| 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein,
partial [Burkholderia multivorans CF2]
Length = 514
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 233/430 (54%), Gaps = 7/430 (1%)
Query: 75 KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKV 134
K++ L P +D VEA + AG++ E F + + S LVH FFA+R +KV
Sbjct: 38 KKSRGLFSPAKIVDAVEAALAQPFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKV 97
Query: 135 PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANL 194
P G A R ++++ ++GGG MG+GIA A + + PV + E +E L G V
Sbjct: 98 PEARR-GTA-RPIERIGVVGGGTMGAGIAIAALDAGLPVTMIERDEAALARGRAHVEKVY 155
Query: 195 QSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPP 254
+ V KG+MT I+ L G Y++ VD+VIEA+ E++++KQ +FA+L + C P
Sbjct: 156 DALVAKGRMTPAAQAARIARLKGSTSYDALAQVDVVIEAVFEDMAVKQAVFAELARVCKP 215
Query: 255 HCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDI 314
+LA+NTS +D++ + ++G HFFSPA+VM LLEIV + S V+ +
Sbjct: 216 GAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEIVVPARASADVVATAFAL 275
Query: 315 GKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLA 374
+++KK P+ G C GF NR+ Y AA L+E G Y IDRA+ +FG PMGPF++
Sbjct: 276 ARQLKKMPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVV 335
Query: 375 DLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKASPDP 433
DL G + AT + R I + E G+ T +G+YLY D R +PDP
Sbjct: 336 DLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTGRGYYLYPDGARVGTPDP 395
Query: 434 EVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIAS 493
EV+ +E+ R+ G+ P+ ++ +I+ ++NE V E IA++ D+D
Sbjct: 396 EVEAIVEQERAKKGIV--PR--AFTDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVF 451
Query: 494 VMGMGFPPYR 503
+ G GFP YR
Sbjct: 452 LHGYGFPRYR 461
>gi|160896840|ref|YP_001562422.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Delftia acidovorans
SPH-1]
gi|160362424|gb|ABX34037.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Delftia acidovorans
SPH-1]
Length = 705
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 231/430 (53%), Gaps = 7/430 (1%)
Query: 75 KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKV 134
K++ L P+ ++ V A V G+ KE F + L S L+H FFA+R T+K+
Sbjct: 229 KKSRGLFSPLKIVECVRAAVELPFDEGIAKERALFVECLNSPQRAGLIHAFFAERETAKI 288
Query: 135 PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANL 194
P APR K+A++GGG MG+GI + + + V + E + + G V
Sbjct: 289 PEAK--AAAPRHFAKIAVIGGGTMGAGITVSALDAGLTVTMIERDADSIARGQANVEKVY 346
Query: 195 QSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPP 254
+ KG+MT+E ++ T Y+ KDVD+VIEA+ E++ +K+ +F +L++ C P
Sbjct: 347 NGLIAKGRMTEEAKAAVMARYTPSTSYDDIKDVDLVIEAVFEDLEVKKAVFKELDRVCKP 406
Query: 255 HCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDI 314
+LA+NTS +D++ I T ++G HFFSPA++M LLEIV + +P V+ ++
Sbjct: 407 GAVLATNTSYLDIDAIAAATSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFEL 466
Query: 315 GKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLA 374
K++KK P+ G C GF NR+ Y QAA ++E G Y ID A+ FG PMGPF++
Sbjct: 467 AKRMKKVPVRAGVCDGFIGNRILAVYKQAADYIMEDGASPYEIDEAVRGFGYPMGPFQVT 526
Query: 375 DLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-RRKASPDP 433
DL G + AT + + + + E G+ T +GFYLY R PDP
Sbjct: 527 DLAGGDIGWATRKRRAATRDPKARYVEVADRVCERGWFGQKTGRGFYLYPHGARVGQPDP 586
Query: 434 EVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIAS 493
EV ++ R+ GV P+ K + ++I+ +VNE +V EGIA++ D+D+
Sbjct: 587 EVLAIVDAERAKKGVT--PR--KFTPEEIMRRYMAAMVNEGAKVVEEGIALRPLDVDVTF 642
Query: 494 VMGMGFPPYR 503
+ G GFP +R
Sbjct: 643 LSGYGFPRFR 652
>gi|226193718|ref|ZP_03789321.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei Pakistan 9]
gi|225934296|gb|EEH30280.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei Pakistan 9]
Length = 708
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 260/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + EEA +LGLVD + + ++ + ++L V +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAAG-AGVRRTRDAQGLADRA 217
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A ARA + + L P +D V A + GL+ E F + L S
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR +K P T G APR ++++ ++GGG MG+GIA A + S +PV + E ++
Sbjct: 278 LVHAFFAQREAAKSP-ETRRG-APRAIERIGVVGGGTMGAGIAVAALDSGFPVTMIERDD 335
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE G V V KG+MT ++ G YE+ D+VIEA+ E++++
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA++M LLE+V
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ ++ +K+ K P+ G C GF NR+ Y AA ++E G Y IDRA
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I +FG PMGP+++ DL G + AT + R I + E G+ T +G+
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ I +AR+ GV+ P+ ++++IV ++NE V
Sbjct: 576 YLYPDGARVGTPDPEVEAIIAQARAAKGVS--PR--AFTDEEIVRRYLAAMINEGANVVH 631
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP +R
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHR 655
>gi|432932478|ref|XP_004081759.1| PREDICTED: peroxisomal bifunctional enzyme-like [Oryzias latipes]
Length = 717
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 273/542 (50%), Gaps = 26/542 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ T + V G EA LGLVD V N V A ++AL + + +P + T
Sbjct: 150 LITTGRHVTGAEALQLGLVDKVTDRNT-VDEAVKFALSVAD--QPPNSRRVSTFPCPRHP 206
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ +F+ A + R++A P+ C+ V A G+++E E L S ++
Sbjct: 207 DLDALFEGAMQRVRQRARGALAPVACVQAVRAAATLPYAQGMERERELMATLFTSGQARA 266
Query: 121 LVHIFFAQR--GTSKVP-GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+ FFAQR G +P G P V K ++G G MG GI+ AL+ + V+ E
Sbjct: 267 QQYHFFAQRAVGRWSMPSGARWDTTKPGAVHKAMVIGLGTMGRGISVALVQAGVSVVAME 326
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
NEK L + + L+ K+ + + + E DVD+VIEA+ E+
Sbjct: 327 TNEKQLMEAKQAISSMLERGAKR-----RGVAPALDKIGYSSNMEPAADVDLVIEAVFED 381
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK+++F L C P L SNTS +D++ + T + +VG HFF+PAHVM LLE+
Sbjct: 382 MALKKKVFQQLSALCKPGTFLCSNTSGLDIDQLASETRHPELVVGMHFFAPAHVMKLLEV 441
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V +++SPQ + +++GK++ K + VGNC GF NRM PY + AF L+E GT +
Sbjct: 442 VYGSRSSPQAVATAMELGKQMGKVSVAVGNCRGFVGNRMLKPYLEQAFFLLEEGTTPEFV 501
Query: 358 DRAITKFGMPMGPFRLADL----VGFGVAIATG-MQFIENFPERTYK----SMIIPIMQE 408
D+ + +FG MG FR++DL VG+ V A G + E R + S + ++ E
Sbjct: 502 DQVLEEFGFAMGVFRMSDLSGLDVGWRVRKADGLLNASEGHSARIRQGCRYSPLGDLLCE 561
Query: 409 DKRAGETTRKGFYLYDE--RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMI 466
R G+ T +G+Y YD+ R A PDP + F+EK R+ G+ ++ ++++E
Sbjct: 562 QGRFGQKTGRGWYQYDKPGGRVAKPDPWLHGFLEKFRTQHGLVAR----RIDHQEVLERC 617
Query: 467 FFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCYF 526
+ ++NE R+ +GIA D+D+ V+G +PP+R + G + L Y
Sbjct: 618 LYALMNEGFRILEDGIAAGPEDIDVIYVLGYSWPPHRGGPMFYAGMVGLQKVLERLEHYH 677
Query: 527 DQ 528
+
Sbjct: 678 QE 679
>gi|288960821|ref|YP_003451161.1| 3-hydroxyacyl-CoA dehydrogenase [Azospirillum sp. B510]
gi|288913129|dbj|BAI74617.1| 3-hydroxyacyl-CoA dehydrogenase [Azospirillum sp. B510]
Length = 728
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/426 (33%), Positives = 233/426 (54%), Gaps = 7/426 (1%)
Query: 79 NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVT 138
L P+ C+D VE GL E + F +L + L H F A+R + + G+
Sbjct: 245 GLPAPVACVDCVEKAATLPFHEGLAFEHDCFTRLRGTAEFAGLRHAFLAERRAADIRGLP 304
Query: 139 DLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRV 198
D G+ PR VK VA++G G MG GIA +L + V L E ++ L+ G+ +R +S +
Sbjct: 305 D-GIKPRPVKTVAVIGAGTMGGGIAMSLANAGLAVTLIEREQEALDRGLAIIRQTCESAL 363
Query: 199 KKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCIL 258
+KG++T E+ + L+ G + Y+ + D+VIEA+ E++ +K+Q+F ++ +L
Sbjct: 364 RKGRLTAEEAAGRLDLIKGCVGYDPVRQADLVIEAVFEDLEVKRQVFEQIDAVARAGTVL 423
Query: 259 ASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKI 318
A+NTS +DL+ I T ++G HFFSPAHVM LLE+VR T+P V+ + + ++I
Sbjct: 424 ATNTSMLDLDRIAGFTRRPQDVLGLHFFSPAHVMKLLEVVRGAATAPDVLATAIALARRI 483
Query: 319 KKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVG 378
KT +V G C GF NR+ PY A L++ G + +D+AI ++GM MGPFR++DL G
Sbjct: 484 GKTSVVSGVCEGFIGNRILQPYLYQAGRLLDEGALPHQVDQAIERWGMAMGPFRVSDLAG 543
Query: 379 FGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYD-ERRKASPDPEVKK 437
+ Q + N PE + ++ R G+ + +G+Y Y +R P EV
Sbjct: 544 NDLGAGIRAQVMANRPELAFSGSFDAVVAM-GRFGQKSGRGWYDYSASQRGPQPSMEVNA 602
Query: 438 FIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGM 497
+ G+ + +++++I++ + +VNE +V +GIA +A+D+D+ G
Sbjct: 603 AVVAESGRLGL----RRRTIADEEIIDRLLLALVNEGAKVLGDGIAQRASDIDVVYTAGY 658
Query: 498 GFPPYR 503
GFP +R
Sbjct: 659 GFPRWR 664
>gi|221065494|ref|ZP_03541599.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
gi|220710517|gb|EED65885.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
Length = 705
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 254/504 (50%), Gaps = 7/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + + + + GL+D + V +A ++L P ++
Sbjct: 157 LMLSGQQIGAKAGLAAGLLDKLDDGADPVVAGLAYARELLAQGAPLRPVSATPGRLADKA 216
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ RA K++ L P+ ID V+A + GL+ E F + S
Sbjct: 217 AAQAELDALRADTAKKSRGLFSPLKIIDCVQAALDLPFAEGLKFERAQFLACIDSPQRAG 276
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FFA+R T+K+P PR K+AI+GGG MG+GI + + + V + E +
Sbjct: 277 LIHAFFAERETAKIPEAR--AAQPRAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERDA 334
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ + G V + KG+M++E ++ T Y+ DVD+VIEA+ E++ +
Sbjct: 335 ESIARGQANVEKVYNGLIAKGRMSEEAKAAIMARYTPSTRYDDIADVDLVIEAVFEDLEV 394
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F +L++ C +LA+NTS +D++ I T ++G HFFSPA++M LLEIV
Sbjct: 395 KKAVFKELDRVCKRGAVLATNTSYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVVP 454
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ +P V+ ++ KK+KK P+ G C GF NR+ Y QAA L+E G Y ID A
Sbjct: 455 AKVAPDVVTTAFELAKKMKKVPVRAGVCDGFIGNRILATYKQAADYLMEDGASPYEIDEA 514
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG MGPF++ DL G + AT + + I + E G+ T +GF
Sbjct: 515 VRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEIADRICEQGWFGQKTGRGF 574
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY + R PDPEV ++ R+ GVA P + ++I+ +VNE +V
Sbjct: 575 YLYPQGARIGQPDPEVLAIVDAERAKKGVAPRP----FTAEEIMRRYMAAMVNEGAKVVG 630
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D+ + G GFP +R
Sbjct: 631 EGIALRPLDVDVTFISGYGFPRHR 654
>gi|281354037|gb|EFB29621.1| hypothetical protein PANDA_003730 [Ailuropoda melanoleuca]
Length = 700
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 169/547 (30%), Positives = 272/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D +V + + + A + + LE RR I+
Sbjct: 128 LITSGRHILADEALKLGILDEIVNSDPVEEAIKLAERISDQPLESRR------LCNKPIQ 181
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + RKQ P C+ V+A V GL+KE E F L +S
Sbjct: 182 SLPNMDSIFSEAFLKMRKQHPGCLSQETCVRAVQAAVQYPYEVGLKKEEELFMYLQKSGQ 241
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L ++FFA+R SK G + + V ++G G MG GI +L + PVI
Sbjct: 242 ARALQYVFFAERNVSKWSTPSGASWKTAVAHHISSVGVVGLGTMGRGIVISLAKAKIPVI 301
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
E ++K LE + + L+ K + + + LT + + VD+VIEA+
Sbjct: 302 AVESDKKQLEVAEKIISSLLEKEASKMQHSSHPWLGPKPRLTTSM--KELGGVDLVIEAV 359
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E ++LK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 360 FEEINLKKQVFAELSAVCKPEAFLCTNTSALDIDEIASSTDRPHLVIGTHFFSPAHVMKL 419
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LEI+ +SP I ++++ KKIKK +VVGNC GF NRM Y + L+E G+
Sbjct: 420 LEIIPGQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLKAYYNQTYFLLEEGSKP 479
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG+ MGPFR++DL G + TG + P R + IP
Sbjct: 480 EGVDQVLEEFGLKMGPFRVSDLAGLDIGWKSRQGQGLTGPKLPSGTPARKRGNRRYCPIP 539
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + +F+ + R I+P+ +S+ +
Sbjct: 540 DMLCESGRFGQKTGKGWYQYDKPLGRIHKPDPWLSEFLSQYRET--YHIEPRI--ISQDE 595
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EG+A +D+ + G G+P +R + + +
Sbjct: 596 ILERCLYSLINEAFRILEEGMAAAPEHIDVIYLHGYGWPRHRGGPMFYASTVGLPTVLEK 655
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 656 LQKYYRQ 662
>gi|402700675|ref|ZP_10848654.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Pseudomonas fragi A22]
Length = 703
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 259/504 (51%), Gaps = 9/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVV-APNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
M+L +PV A GL+D + +P L++ A +WA ++L + P + D L
Sbjct: 154 MILYGRPVNARHALQAGLLDRLAQSPETLLAEASEWAHELLAAQAPAQPSPPWPDPASEL 213
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
F+ R+ + + P + +EA GL EA FQ+L S +
Sbjct: 214 --PAHYFQQYRSANKHRWQGQPAPQQALAALEAACNLPLAEGLAFEAGLFQQLEGSSQSE 271
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+L H+ A+ PGV +L R V +VAI+G G MG GIA + PV L E+
Sbjct: 272 ALRHVHAAEGDLGTQPGV-NLQTPIRPVHRVAIIGAGTMGGGIAMCFANAGIPVALLELK 330
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L+ G+ ++R N Q+ VK+GK+T+ + E+ + LL G LDY D D+VIEA+ E+++
Sbjct: 331 AEALDHGLRQIRTNYQTGVKRGKLTEAQLEQRMELLHGTLDYAEISDADLVIEAVFESLA 390
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+KQQ+F L++ C P ILASNTST+D++ I T ++G HFFSPA+VM LLE+VR
Sbjct: 391 IKQQVFRTLDEVCKPGAILASNTSTLDVDAIAAVTRRPQDVIGLHFFSPANVMRLLEVVR 450
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
T+ + L I +I K P+V G C GF NRM PY++ A L+ G + ID+
Sbjct: 451 GQATAADTLATTLSIAARIGKIPVVSGVCFGFIGNRMLEPYSREAHRLLLEGATVAQIDK 510
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
+T G+ MG + DL G V+ E + I + + G+ T G
Sbjct: 511 VLTDLGLAMGVLAMHDLAGIDVSYLIREARREQIRQDPGYCKIADALYDLGHYGQKTASG 570
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
FYLY R +PE+ E G+ I + +S ++I + F ++NE +
Sbjct: 571 FYLYQGREPVE-NPELTALAENI--AWGLGITRRV--ISNQEIHDRCMFMLINEGIALLD 625
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA ++ D+D+ + G GFP +R
Sbjct: 626 EGIAQRSGDIDLVWINGYGFPAWR 649
>gi|418528630|ref|ZP_13094578.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
ATCC 11996]
gi|371454384|gb|EHN67388.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
ATCC 11996]
Length = 705
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/504 (31%), Positives = 253/504 (50%), Gaps = 7/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + + + + GLVD V+ +A ++L P ++
Sbjct: 157 LMLSGQQIGAKAGLAAGLVDKPDDGTDPVAAGLAYARELLAQGAPLRPVSATPGRLADKA 216
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A+ RA K++ L P+ ID V+A + GL+ E F + S
Sbjct: 217 AAQAELDALRADTAKKSRGLFSPLKIIDCVQAALDLPFAEGLKFERTQFLACIDSPQRAG 276
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H FFA+R T+K+P PR K+AI+GGG MG+GI + + + V + E +
Sbjct: 277 LIHAFFAERETAKIPEAR--AAQPRAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERDA 334
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ + G V + KG+M++E ++ T Y+ DVD+VIEA+ E++ +
Sbjct: 335 ESIARGQANVEKVYNGLIAKGRMSEEAKAAILARYTPSTRYDEIADVDLVIEAVFEDLEV 394
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F +L++ C +LA+NTS +D++ I T ++G HFFSPA++M LLEIV
Sbjct: 395 KKAVFKELDRVCKSGAVLATNTSYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVVP 454
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ +P V+ ++ +K+KK P+ G C GF NR+ Y QAA L+E G Y ID A
Sbjct: 455 AKVAPDVVTTAFELARKMKKVPVRAGVCDGFIGNRILATYKQAADYLMEDGASPYEIDEA 514
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG MGPF++ DL G + AT + + I + E G+ T +GF
Sbjct: 515 VRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEIADRICEQGWFGQKTGRGF 574
Query: 421 YLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY + R PDPEV ++ R+ GV P + ++I+ +VNE +V
Sbjct: 575 YLYPQGARIGQPDPEVLAIVDAERAKKGVTPRP----FTAEEIMRRYMAAMVNEGAKVVG 630
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D+ + G GFP +R
Sbjct: 631 EGIALRPLDVDVTFISGYGFPRHR 654
>gi|291400311|ref|XP_002716515.1| PREDICTED: enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
dehydrogenase-like [Oryctolagus cuniculus]
Length = 723
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/522 (31%), Positives = 265/522 (50%), Gaps = 31/522 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +AH LG++D VV + + + A++ LE RR ++
Sbjct: 151 LITSGRHISAGDAHKLGILDEVVNSDPTEEAIKFAQRVLGQPLESRR------LCNKPVQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + RKQ P P C+ ++A V G+++E E F L S
Sbjct: 205 SLPNMDTIFSDAFVKMRKQYPGCLAPETCVRAIQAAVKYPYTVGIKEEEELFMYLRESGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + FFA++ +K G + + R + V +LG G MG GIA + + PVI
Sbjct: 265 ARALQYAFFAEKNANKWSTPSGASWKTASARPISSVGVLGLGTMGRGIAISFARAKIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
E ++K LEA + + L+ K + + LT L + VD+V+EA+
Sbjct: 325 AVESDKKQLEAANRVITSILEKEASKMQQSGHPGSVPKPRLTSSL--KELSGVDLVVEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E+++LK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 383 FEDMALKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHMVIGTHFFSPAHVMRL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ K+IKK +VVGNC GF NRM PY + L+E G+
Sbjct: 443 LEVIPSKYSSPTTIATVMNLSKRIKKVGVVVGNCHGFVGNRMLRPYYDQTYFLLEDGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPERTYKSM----II 403
ID+ + +FG MGPFR++DL G V TG P R + I
Sbjct: 503 EEIDQVLEEFGFKMGPFRVSDLAGLDVGWRIRKGQGLTGPTLPPGTPARKRNNRRYCPIP 562
Query: 404 PIMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ KG+Y YD+ R PDP + F+ + R I+P+ +S+++
Sbjct: 563 DMLCESGRFGQKVGKGWYQYDKPLGRIHKPDPWLSNFLSQYRET--YHIEPRV--ISQEE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
I+E + ++NEA R+ EG+A +D+ + G G+P +R
Sbjct: 619 ILERSLYALINEAFRILGEGMAASPEHIDVIYLYGYGWPRHR 660
>gi|301759735|ref|XP_002915716.1| PREDICTED: peroxisomal bifunctional enzyme-like [Ailuropoda
melanoleuca]
Length = 723
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 169/547 (30%), Positives = 272/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D +V + + + A + + LE RR I+
Sbjct: 151 LITSGRHILADEALKLGILDEIVNSDPVEEAIKLAERISDQPLESRR------LCNKPIQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + RKQ P C+ V+A V GL+KE E F L +S
Sbjct: 205 SLPNMDSIFSEAFLKMRKQHPGCLSQETCVRAVQAAVQYPYEVGLKKEEELFMYLQKSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L ++FFA+R SK G + + V ++G G MG GI +L + PVI
Sbjct: 265 ARALQYVFFAERNVSKWSTPSGASWKTAVAHHISSVGVVGLGTMGRGIVISLAKAKIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
E ++K LE + + L+ K + + + LT + + VD+VIEA+
Sbjct: 325 AVESDKKQLEVAEKIISSLLEKEASKMQHSSHPWLGPKPRLTTSM--KELGGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E ++LK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 383 FEEINLKKQVFAELSAVCKPEAFLCTNTSALDIDEIASSTDRPHLVIGTHFFSPAHVMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LEI+ +SP I ++++ KKIKK +VVGNC GF NRM Y + L+E G+
Sbjct: 443 LEIIPGQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLKAYYNQTYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG+ MGPFR++DL G + TG + P R + IP
Sbjct: 503 EGVDQVLEEFGLKMGPFRVSDLAGLDIGWKSRQGQGLTGPKLPSGTPARKRGNRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + +F+ + R I+P+ +S+ +
Sbjct: 563 DMLCESGRFGQKTGKGWYQYDKPLGRIHKPDPWLSEFLSQYRET--YHIEPRI--ISQDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EG+A +D+ + G G+P +R + + +
Sbjct: 619 ILERCLYSLINEAFRILEEGMAAAPEHIDVIYLHGYGWPRHRGGPMFYASTVGLPTVLEK 678
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 679 LQKYYRQ 685
>gi|76810920|ref|YP_332048.1| enoyl-CoA hydratase [Burkholderia pseudomallei 1710b]
gi|254258381|ref|ZP_04949435.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
1710a]
gi|76580373|gb|ABA49848.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1710b]
gi|254217070|gb|EET06454.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
1710a]
Length = 708
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 260/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + EEA +LGLVD + + ++ + ++L V +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAAG-AGVRRTRDAQGLADRA 217
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A ARA + + L P +D V A + GL+ E F + L S
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR +K P T G APR ++++ ++GGG MG+GIA A + + +PV + E ++
Sbjct: 278 LVHAFFAQREAAKSP-ETRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE G V V KG+MT ++ G YE+ D+VIEA+ E++++
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA++M LLE+V
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ ++ +K+ K P+ G C GF NR+ Y AA ++E G Y IDRA
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I +FG PMGP+++ DL G + AT + R I + E G+ T +G+
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ I +AR+ GV+ P+ ++++IV ++NE V
Sbjct: 576 YLYPDGARVGTPDPEVEAIIAQARAAKGVS--PR--AFTDEEIVRRYLAAMINEGANVVH 631
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP +R
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHR 655
>gi|126441399|ref|YP_001057503.1| enoyl-CoA hydratase [Burkholderia pseudomallei 668]
gi|167917354|ref|ZP_02504445.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei BCC215]
gi|237810655|ref|YP_002895106.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
gi|254196939|ref|ZP_04903363.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei S13]
gi|418392585|ref|ZP_12968350.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 354a]
gi|418558385|ref|ZP_13122951.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 354e]
gi|126220892|gb|ABN84398.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
668]
gi|169653682|gb|EDS86375.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei S13]
gi|237504800|gb|ACQ97118.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
gi|385363373|gb|EIF69153.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 354e]
gi|385375227|gb|EIF80015.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 354a]
Length = 708
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 260/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + EEA +LGLVD + + ++ + ++L V +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAAG-AGVRRTRDAQGLADRA 217
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A ARA + + L P +D V A + GL+ E F + L S
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR +K P T G APR ++++ ++GGG MG+GIA A + + +PV + E ++
Sbjct: 278 LVHAFFAQREAAKSP-ETRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE G V V KG+MT ++ G YE+ D+VIEA+ E++++
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA++M LLE+V
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ ++ +K+ K P+ G C GF NR+ Y AA ++E G Y IDRA
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I +FG PMGP+++ DL G + AT + R I + E G+ T +G+
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ I +AR+ GV+ P+ ++++IV ++NE V
Sbjct: 576 YLYPDGARVGTPDPEVEAIIAQARAAKGVS--PR--AFTDEEIVRRYLAAMINEGANVVH 631
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP +R
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHR 655
>gi|254181976|ref|ZP_04888573.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 1655]
gi|184212514|gb|EDU09557.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 1655]
Length = 708
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 260/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + EEA +LGLVD + + ++ + ++L V +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAAG-AGVRRTRDAQGLADRA 217
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A ARA + + L P +D V A + GL+ E F + L S
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR +K P T G APR ++++ ++GGG MG+GIA A + + +PV + E ++
Sbjct: 278 LVHAFFAQREAAKSP-ETRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE G V V KG+MT ++ G YE+ D+VIEA+ E++++
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA++M LLE+V
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ ++ +K+ K P+ G C GF NR+ Y AA ++E G Y IDRA
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I +FG PMGP+++ DL G + AT + R I + E G+ T +G+
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ I +AR+ GV+ P+ ++++IV ++NE V
Sbjct: 576 YLYPDGARVGTPDPEVEAIIAQARAAKGVS--PR--AFTDEEIVRRYLAAMINEGANVVH 631
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP +R
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHR 655
>gi|254187905|ref|ZP_04894417.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
gi|157935585|gb|EDO91255.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
Length = 708
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 260/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + EEA +LGLVD + + ++ + ++L V +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAAG-AGVRRTRDAQGLADRA 217
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A ARA + + L P +D V A + GL+ E F + L S
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR +K P T G APR ++++ ++GGG MG+GIA A + + +PV + E ++
Sbjct: 278 LVHAFFAQREAAKSP-ETRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE G V V KG+MT ++ G YE+ D+VIEA+ E++++
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA++M LLE+V
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ ++ +K+ K P+ G C GF NR+ Y AA ++E G Y IDRA
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I +FG PMGP+++ DL G + AT + R I + E G+ T +G+
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ I +AR+ GV+ P+ ++++IV ++NE V
Sbjct: 576 YLYPDGARVGTPDPEVEAIIAQARAAKGVS--PR--AFTDEEIVRRYLAAMINEGANVVH 631
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP +R
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHR 655
>gi|332818623|ref|XP_003310203.1| PREDICTED: peroxisomal bifunctional enzyme [Pan troglodytes]
Length = 627
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 273/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D VV + + + A++ + LE RR I+
Sbjct: 55 LITSGRRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRR------LCNKPIQ 108
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + R+Q P C+ V+A V G++KE E F LL+S
Sbjct: 109 SLPNMDSIFSEALLKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQ 168
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + FFA+R +K G + + R V V ++G G MG GI + + PVI
Sbjct: 169 ARALQYAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVI 228
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 229 AVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAV 286
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E +SLK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 287 FEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKL 346
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY A+ L+E G+
Sbjct: 347 LEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKP 406
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG MGPFR++DL G V TG P R + IP
Sbjct: 407 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRYCPIP 466
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + KF+ + R I+P+ +S+ +
Sbjct: 467 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETH--HIEPR--TISQDE 522
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EGIA +D+ + G G+P ++ + + +
Sbjct: 523 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 582
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 583 LQKYYRQ 589
>gi|372282089|ref|ZP_09518125.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding, partial [Oceanicola
sp. S124]
Length = 667
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/445 (34%), Positives = 242/445 (54%), Gaps = 21/445 (4%)
Query: 63 REIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLV 122
R F+ A + K+A P + ++ + RA + E FQ+L ++
Sbjct: 182 RADFEAAAERLLKRARGAEAPHLLVEAIGNAFTLEGRAAQEAEQALFQRLREGPQSAAMR 241
Query: 123 HIFFAQRGTSKVP-GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEK 181
H+FFA+R +++P G+T G A R + + A++G G MG GIA + PV L + + +
Sbjct: 242 HLFFAERTAARLPDGLT--GTAGR-ITRAAVIGAGTMGGGIAMCFADAGLPVTLIDKSAE 298
Query: 182 FLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLK 241
L AG+ R+R N VK+G+++ + E ++ +T E+ +D D+VIEA+ E+++LK
Sbjct: 299 GLAAGLDRIRKNYDISVKRGRLSPSEAEARMARITPAQTLEAAQDADLVIEAVFEDMALK 358
Query: 242 QQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTN 301
QQ+F DL+ P +LA+NTS++D++ + T R+VG HFFSPA+VM LLE+VR
Sbjct: 359 QQLFRDLDALLAPGAVLATNTSSLDIDEMAAATGRPQRVVGLHFFSPANVMTLLEVVRGA 418
Query: 302 QTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAI 361
+T + L + + K ++VGNC GF NR+ A L+++G +DR I
Sbjct: 419 KTDADTLATALALAATLGKQAVIVGNCPGFVGNRILRQRHHQAEQLLQQGARPETVDRVI 478
Query: 362 TKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQE---DKRAGETTRK 418
T FGM MGPF++ADL G VA R + +P+ R G+ T K
Sbjct: 479 TAFGMAMGPFQMADLAGLDVARMV----------RRGQGYALPVADALCGLGRFGQKTGK 528
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
G+YLY++ R PDP+V + I G P+ ++ +I IF+P+VNEA R+
Sbjct: 529 GYYLYEDGRTPRPDPQVDQLIADVSKRLGA---PQR-TFTDDEIRARIFYPMVNEAARIL 584
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA + +D+D+ V G GFP +R
Sbjct: 585 DEGIAARPSDIDVTYVHGYGFPAWR 609
>gi|114590836|ref|XP_517004.2| PREDICTED: peroxisomal bifunctional enzyme isoform 2 [Pan
troglodytes]
gi|410226936|gb|JAA10687.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410247014|gb|JAA11474.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410289468|gb|JAA23334.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410332285|gb|JAA35089.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410332287|gb|JAA35090.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410332289|gb|JAA35091.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
Length = 723
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 273/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D VV + + + A++ + LE RR I+
Sbjct: 151 LITSGRRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRR------LCNKPIQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + R+Q P C+ V+A V G++KE E F LL+S
Sbjct: 205 SLPNMDSIFSEALLKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + FFA+R +K G + + R V V ++G G MG GI + + PVI
Sbjct: 265 ARALQYAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 325 AVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E +SLK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 383 FEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY A+ L+E G+
Sbjct: 443 LEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG MGPFR++DL G V TG P R + IP
Sbjct: 503 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + KF+ + R I+P+ +S+ +
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETH--HIEPR--TISQDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EGIA +D+ + G G+P ++ + + +
Sbjct: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 679 LQKYYRQ 685
>gi|424902006|ref|ZP_18325522.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia thailandensis MSMB43]
gi|390932381|gb|EIP89781.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia thailandensis MSMB43]
Length = 708
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 263/507 (51%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIE--- 57
+ML+ + EEA +LGLVD + + ++ + ++L A+ +T +
Sbjct: 159 LMLSGRHAPAEEALTLGLVDRLAHSDDTLAEGLAYVHELLAAG----ASARRTRDAQGLA 214
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A ARA K++ L P +D V A + GL+ E F + L S
Sbjct: 215 DRAAAEAALDAARADVAKKSRGLFSPAKIVDAVAAALAQPFDEGLRTERRLFVECLDSPQ 274
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
LVH FFA+R +K P APR ++++ ++GGG MG+GIA A + + +PV + E
Sbjct: 275 RAGLVHAFFAEREAAKSPETRRA--APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIE 332
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ LE G V V KG+MT ++ LTG YE+ D+VIEA+ E+
Sbjct: 333 RDDASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARLTGGTSYEALAQADVVIEAVFED 392
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++K+ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA++M LLE+
Sbjct: 393 MAVKKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEV 452
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + S V+ ++ KK+KK P+ G C GF NR+ Y AA ++E G Y I
Sbjct: 453 VVPAKVSADVVATAFELAKKLKKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYRI 512
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRAI +FG PMGP+++ DL G + AT + R I + E G+ T
Sbjct: 513 DRAIREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTG 572
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+G+YLY D R +PDPEV+ I + R+ GV+ P+ ++ +IV ++NE
Sbjct: 573 RGYYLYPDGARVGTPDPEVEAIIAEERAKKGVS--PR--AFTDDEIVRRYLAAMINEGAN 628
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V E IA++ D+D + G GFP +R
Sbjct: 629 VVHERIALRPLDVDAVFLHGYGFPRHR 655
>gi|118094872|ref|XP_422690.2| PREDICTED: peroxisomal bifunctional enzyme [Gallus gallus]
Length = 726
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 272/527 (51%), Gaps = 38/527 (7%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
++ T + + EA LGLVD VV N + + A + L HRR + + + +E
Sbjct: 151 IITTGRHIPATEALKLGLVDEVVEENTVEAAIRLANKLIGQPLGHRRLSLKPVPRLPNME 210
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A + +K+A P +C ++A G++KE E F LL S
Sbjct: 211 ------AFLSEALVKVKKRAQGCLAPELCFQAIKAATEQPFADGVRKERELFNILLTSGQ 264
Query: 118 CKSLVHIFFAQRGTSKV---PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
K+L + FFA+R K G + +P+ ++K A++G G MG GI T+L+ + PV+
Sbjct: 265 AKALQYAFFAERAVEKWTTPSGASWKSASPQPIRKAAVIGLGTMGRGIVTSLVKAKIPVV 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISL-----LTGVLDYESFKDVDM 229
E N ++L G R + +++ M E+ +T+ L +D++ +DVD+
Sbjct: 325 ALEQNLEYLNTG----RKAVMLLLEREAMKMEQGAQTLDFHNPAQLQFTVDFDVLRDVDL 380
Query: 230 VIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPA 289
VIEA+ EN++LK++IF+ L + C P L +NTS ++++ I T +++G HFFSPA
Sbjct: 381 VIEAVFENMALKKEIFSKLSRICKPEAFLCTNTSALNIDDIASVTGRPQQVIGTHFFSPA 440
Query: 290 HVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVE 349
HVM LLEI+ TSP I + + K +KK +VVGNC GF NRM FPY Q A L+E
Sbjct: 441 HVMRLLEIIYGRHTSPNTIATAIQLAKVMKKVGVVVGNCFGFVGNRMMFPYVQQAVFLLE 500
Query: 350 RGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAI-------ATGMQFIENFPERT---YK 399
G+ +D+ + FG +GPFR++DL G V TG P R Y+
Sbjct: 501 EGSRPEDVDQVLEDFGFKIGPFRMSDLAGLDVGWRSRKDQGLTGPSLAPGTPVRQRHGYR 560
Query: 400 SMIIP-IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAK 456
+P ++ E R G+ T KG+Y Y++ R A PDP + F+ + R I +F
Sbjct: 561 YSPLPDLLCEKGRFGQKTGKGWYQYEKAGGRTAKPDPWIHSFLREYRDTH--QIKTRF-- 616
Query: 457 LSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ +++I+E F ++NE + AEGIA LD+ + G G+P +R
Sbjct: 617 IDQEEILERCLFTLINEGFDILAEGIASGPEHLDVVYINGYGWPKHR 663
>gi|298157738|gb|EFH98817.1| fatty acid oxidation complex alpha subunit [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
Length = 721
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 167/520 (32%), Positives = 266/520 (51%), Gaps = 41/520 (7%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP +L + A LD R+P K DK+
Sbjct: 170 SGKESSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGELDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
++ +SL+ +F + K D + VK+ A+LG G+MG GIA + P+
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDA--VAKEVKQAAVLGAGIMGGGIAYQSAVKGTPI 340
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+EA
Sbjct: 341 LMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEA 400
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
++EN +KQ + A++E H ILASNTSTI ++L+ + + VG HFF+P H+MP
Sbjct: 401 VVENPKVKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMP 460
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R ++S + + + +K+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 461 LVEVIRGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVD 520
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKR 411
ID+ + KFG PMGP L D+VG E FP+R + ++ + E KR
Sbjct: 521 FVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKR 580
Query: 412 AGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDIV 463
G+ KGFY Y+ +K P DP V K + + R ++S++DI+
Sbjct: 581 LGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDII 628
Query: 464 EMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 629 NWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|158257028|dbj|BAF84487.1| unnamed protein product [Homo sapiens]
Length = 723
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 169/547 (30%), Positives = 273/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D VV + + + A++ + LE RR I+
Sbjct: 151 LITSGRRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRR------LCNKPIQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + R+Q P C+ V+A V G++KE E F LL+S
Sbjct: 205 SLPNMDSIFSEALLKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + FF +R +K G + + R V V ++G G MG GI + + PVI
Sbjct: 265 ARALQYAFFTERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 325 AVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E +SLK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 383 FEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY A+ L+E G+
Sbjct: 443 LEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG MGPFR++DL G V TG + P R + IP
Sbjct: 503 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLLPGTPARKRGNRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDE--RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + KF+ + R I+P+ +S+ +
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSRYRKTH--HIEPR--TISQDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EGIA +D+ + G G+P ++ + + +
Sbjct: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 679 LQKYYRQ 685
>gi|77458979|ref|YP_348485.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Pseudomonas fluorescens Pf0-1]
gi|77382982|gb|ABA74495.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
Length = 703
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 156/503 (31%), Positives = 257/503 (51%), Gaps = 9/503 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN-QLVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
++L+ + + E A LG++D + + QL+ AR +A +++E P + E L
Sbjct: 154 LILSGEQIDAERARMLGILDRISSSTEQLLEEARAYANELIECCAPARPAEAWPNPAEDL 213
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+ + R + + + P + + +EA + GL +E F++ S K
Sbjct: 214 PD--DFLARYRVEHEPRWKSRLAPRLVLSALEAACLLPLEEGLVRELTLFKQAEASRQSK 271
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+L H+FFA++ + P + D R++ KVA++G G +G GIA + PV L +++
Sbjct: 272 ALRHVFFAEQDARRTPRI-DTADPSRKINKVAVIGAGTLGGGIAMSFADVGIPVALMDLD 330
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L+ G+ RVR N Q VK+GK++ + ++ + LL G LDY D D++IEA+ E +
Sbjct: 331 GRTLDRGLKRVRENYQLSVKRGKLSAVQMQQRMELLFGTLDYADLSDADLIIEAVCEKME 390
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
K Q+F LE C P ILA+NTS++D++ + + ++G HFFSPA+VM L+EIV
Sbjct: 391 SKHQVFLALESVCKPGAILATNTSSLDIDALAKMVSRPQDVIGMHFFSPANVMRLVEIVL 450
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
T+P V+ ++DI ++I K P++ GN G NRM PY + A LV G +D
Sbjct: 451 CQTTAPDVVTAVMDIARRIGKLPVISGNSAGSIGNRMLEPYAREAHRLVLEGATPVQVDA 510
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
+T + MG F + DL G V+ E + + R G+ T +G
Sbjct: 511 VLTSLDLNMGVFSMLDLAGIDVSFLMRDANREAIAHDQSYCCLAEELYALGRYGQKTGRG 570
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
FYLY E R D EV E+ V + + +I + F ++NE R+
Sbjct: 571 FYLY-EGRSPREDREVIMLAEQLAREHNV----TRRNIEDLEIHDRCLFVMINEGIRLLD 625
Query: 480 EGIAVKAADLDIASVMGMGFPPY 502
EGIA++A+D+D+ + G GFP +
Sbjct: 626 EGIALRASDIDLVWINGYGFPAH 648
>gi|53724340|ref|YP_104708.1| fatty oxidation complex subunit alpha [Burkholderia mallei ATCC
23344]
gi|67640367|ref|ZP_00439176.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei GB8 horse 4]
gi|121601249|ref|YP_991561.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei SAVP1]
gi|124386354|ref|YP_001027365.1| fatty oxidation complex subunit alpha [Burkholderia mallei NCTC
10229]
gi|126450585|ref|YP_001082330.1| enoyl-CoA hydratase [Burkholderia mallei NCTC 10247]
gi|167003208|ref|ZP_02268998.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei PRL-20]
gi|254175157|ref|ZP_04881818.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei ATCC 10399]
gi|254201805|ref|ZP_04908169.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei FMH]
gi|254207134|ref|ZP_04913485.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei JHU]
gi|52427763|gb|AAU48356.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
mallei ATCC 23344]
gi|121230059|gb|ABM52577.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei SAVP1]
gi|124294374|gb|ABN03643.1| putative fatty oxidation complex, alpha subunit [Burkholderia
mallei NCTC 10229]
gi|126243455|gb|ABO06548.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei NCTC 10247]
gi|147747699|gb|EDK54775.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei FMH]
gi|147752676|gb|EDK59742.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei JHU]
gi|160696202|gb|EDP86172.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei ATCC 10399]
gi|238521067|gb|EEP84521.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei GB8 horse 4]
gi|243061205|gb|EES43391.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei PRL-20]
Length = 708
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 260/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + EEA +LGLVD + + ++ + ++L V +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAAG-AGVRRTRDAQGLADRA 217
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A ARA + + L P +D V A + GL+ E F + L S
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR +K P T G APR ++++ ++GGG MG+GIA A + + +PV + E ++
Sbjct: 278 LVHAFFAQREAAKSP-ETRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE G V V KG+MT ++ G YE+ D+VIEA+ E++++
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA++M LLE+V
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ ++ +K+ K P+ G C GF NR+ Y AA ++E G Y IDRA
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I +FG PMGP+++ DL G + AT + R I + E G+ T +G+
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ I +AR+ GV+ P+ ++++IV ++NE V
Sbjct: 576 YLYPDGARVGTPDPEVEAIIAQARAAKGVS--PR--AFTDEEIVRRYLAAMINEGANVVH 631
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP +R
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHR 655
>gi|407770247|ref|ZP_11117618.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Thalassospira xiamenensis M-5 = DSM 17429]
gi|407286787|gb|EKF12272.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Thalassospira xiamenensis M-5 = DSM 17429]
Length = 658
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 261/503 (51%), Gaps = 11/503 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ KPV AH GL+D + A L A A I P A + + P
Sbjct: 157 LITGGKPVNATTAHDYGLIDEI-ADGDLRIAAIALAERIKSDPCP-TALIDRAPVNAPDA 214
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+A + A K+A P++ + V R L E E+F +L S+ K+
Sbjct: 215 DAWDALI---AGIGKKARGQDAPVIAARTIRTAVTGDARTALGLERENFVRLRDSDQSKA 271
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L HIFFA+R +K+P + G+APR + ++ ++GGG+MG+GIATA +L+ Y V++ E +E
Sbjct: 272 LRHIFFAERSVAKLPELA--GVAPRPLHEIGVIGGGIMGAGIATAALLAGYAVVMIERDE 329
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
E GI VR +L +K+G +TQ + ++ + L DY + D D+VIEA+ E++++
Sbjct: 330 DACERGIANVRHHLGGSLKRGIITQSRHDQLLGDLVSSTDYAALADCDLVIEAVFEDMAV 389
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K +FA L +C P +LASNTS +D++ I +R++G HFFSPAHVM LLE+VRT
Sbjct: 390 KHDVFAKLSAHCKPDAVLASNTSYLDIDAIATACTHPERVIGLHFFSPAHVMKLLEVVRT 449
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+P + L +++ K + G C GF NR+ Y + ++E G+ IDRA
Sbjct: 450 RLANPASLATALAFARRLGKIAVPCGVCDGFIGNRIMSAYRKHCEYMLEDGSLPSDIDRA 509
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+T FG PMG F + D+ G ++ AT + + + E R G G+
Sbjct: 510 MTNFGFPMGLFAMQDMAGLEISWATRKRLAPTRDPNERYVALGDYLCEMGRFGRKNGLGW 569
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y YDE KASPDP + + + + G+ P S+ +I+E I + E ++ AE
Sbjct: 570 YRYDEHGKASPDPVIDELVIAESAKKGIKRRP----FSDAEIIETILSAMQAEGEKILAE 625
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIA +D+ V G GFP ++
Sbjct: 626 GIAHSPDAIDVVMVNGYGFPRHK 648
>gi|423018204|ref|ZP_17008925.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Achromobacter
xylosoxidans AXX-A]
gi|338778707|gb|EGP43176.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Achromobacter
xylosoxidans AXX-A]
Length = 706
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 231/426 (54%), Gaps = 7/426 (1%)
Query: 79 NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVT 138
L P ++ V A V GL+ E F + L S L+H FFA+R T+K+P +
Sbjct: 234 GLFSPAKILEAVRAAVELPFDEGLRTERALFLQCLDSPQRAGLIHAFFAERETAKIPELK 293
Query: 139 DLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRV 198
PRR+++V ++GGG MG+GIA AL+ + PV++ E ++ L G RV
Sbjct: 294 QA--RPRRLERVGVIGGGTMGAGIAVALLDAGLPVVMVEQDDAALARGRQRVEHVYDLLA 351
Query: 199 KKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCIL 258
KG+M+ ++ ++ LTG DY + D D+VIEA+ E++ +KQ +FA L++ P +L
Sbjct: 352 GKGRMSADERAARLARLTGATDYAALADADLVIEAVFEDMDVKQAVFAQLDRVVRPDAVL 411
Query: 259 ASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKI 318
A+NTS +D++ I + T R++G HFFSPA++M LLE+V T+ + ++ +++
Sbjct: 412 ATNTSYLDVDRIAQATRDPGRVLGLHFFSPANIMKLLEVVVGRDTAADTVATGFELARRL 471
Query: 319 KKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVG 378
+K + G C GF NR+ + QAA +++E G Y ID A+ FG PMGP+++ DL G
Sbjct: 472 RKIAVRAGVCDGFIGNRILAVHRQAADMMMEDGASPYDIDTAVRDFGYPMGPYQMVDLAG 531
Query: 379 FGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKASPDPEVKK 437
+ AT + I + E G+ T +GFYLY D R +PDP+V
Sbjct: 532 GDIGWATRKRRAATRDPALRYVQIPDRLCERGWFGQKTGRGFYLYPDGARHGTPDPQVLA 591
Query: 438 FIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGM 497
I R +GV P+ +DI ++NEA V E IA++ +D+D+ + G
Sbjct: 592 IIAAERQRAGVT--PR--AFGAEDIQRRYLAAMINEAANVLREDIALRPSDIDMVFLSGY 647
Query: 498 GFPPYR 503
GFP +R
Sbjct: 648 GFPRHR 653
>gi|53718058|ref|YP_107044.1| trifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase [Burkholderia
pseudomallei K96243]
gi|126452416|ref|YP_001064753.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 1106a]
gi|217419418|ref|ZP_03450924.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 576]
gi|242317764|ref|ZP_04816780.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
1106b]
gi|254295974|ref|ZP_04963431.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 406e]
gi|386863120|ref|YP_006276069.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1026b]
gi|403517122|ref|YP_006651255.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei BPC006]
gi|418537788|ref|ZP_13103423.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1026a]
gi|418542107|ref|ZP_13107563.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1258a]
gi|418548433|ref|ZP_13113547.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1258b]
gi|52208472|emb|CAH34407.1| putative trifunctional protein [includes: enoyl-CoA hydratase;
3,2-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei K96243]
gi|126226058|gb|ABN89598.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 1106a]
gi|157806255|gb|EDO83425.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 406e]
gi|217396722|gb|EEC36738.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 576]
gi|242141003|gb|EES27405.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
1106b]
gi|385349704|gb|EIF56271.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1026a]
gi|385356414|gb|EIF62523.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1258a]
gi|385358086|gb|EIF64114.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1258b]
gi|385660248|gb|AFI67671.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1026b]
gi|403072766|gb|AFR14346.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei BPC006]
Length = 708
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 260/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + EEA +LGLVD + + ++ + ++L V +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAAG-AGVRRTRDAQGLADRA 217
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A ARA + + L P +D V A + GL+ E F + L S
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR +K P T G APR ++++ ++GGG MG+GIA A + + +PV + E ++
Sbjct: 278 LVHAFFAQREAAKSP-ETRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE G V V KG+MT ++ G YE+ D+VIEA+ E++++
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA++M LLE+V
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ ++ +K+ K P+ G C GF NR+ Y AA ++E G Y IDRA
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I +FG PMGP+++ DL G + AT + R I + E G+ T +G+
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ I +AR+ GV+ P+ ++++IV ++NE V
Sbjct: 576 YLYPDGARVGTPDPEVEAIIAQARAAKGVS--PR--AFTDEEIVRRYLAAMINEGANVVH 631
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP +R
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHR 655
>gi|432486149|ref|ZP_19728064.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE212]
gi|433174264|ref|ZP_20358789.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE232]
gi|431015358|gb|ELD28913.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE212]
gi|431692008|gb|ELJ57453.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE232]
Length = 714
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 263/513 (51%), Gaps = 32/513 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
M+LT K ++ ++A LGLVD VV P+ ++ A A+++ + RP L ++I P
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVV-PHSILLEA---AVELAKKDRPSSRPLPVRERILAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
LG A + K N ++VVE G+ G +G EA F +L +
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
++L IFFA K PG +D AP + V ILGGGLMG+GIA + PV +K+
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAP--LNSVGILGGGLMGAGIAYVTACKAGLPVRIKD 339
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N + + + L+ +V++ + + +K ++L++G DY F D++IEA+ EN
Sbjct: 340 INPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFEN 399
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ LKQQ+ A++E+ C H I ASNTS++ + I ++++G HFFSP MPL+EI
Sbjct: 400 LELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEI 459
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS Q I + + KK KTPIVV + GF VNR+ PY A ++ G + I
Sbjct: 460 IPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHI 519
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRA 412
D A+ KFG P+GP +L D VG I TG + I + ER + + ++ + D R
Sbjct: 520 DAALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSAPANVVSSILNDDRK 575
Query: 413 GETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
G +GFYLY ++ + S DP + I A+LS + E
Sbjct: 576 GRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQ----------ARLSAPQVAERCVML 625
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R E + D DI +V G+GFPP+
Sbjct: 626 MLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPF 658
>gi|167561369|ref|ZP_02354285.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
oklahomensis EO147]
Length = 478
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 231/430 (53%), Gaps = 7/430 (1%)
Query: 75 KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKV 134
K++ L P +D V A + GL+ E F + L S LVH FFA+R +K
Sbjct: 2 KKSRGLFSPAKIVDAVAAALAQPFDEGLRAERRLFLECLDSPQRAGLVHAFFAEREAAKS 61
Query: 135 PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANL 194
P T G APR V+++ ++GGG MG+GIA A + + PV + E ++ LE G V
Sbjct: 62 P-ETRRG-APRPVERIGVVGGGTMGAGIAVAALDAGLPVTMIERDDASLERGRAHVEKVY 119
Query: 195 QSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPP 254
V KG+MT ++ G Y++ D+VIEA+ E++++K+ +FA+L + C P
Sbjct: 120 AGLVAKGRMTPAAQAARLARFKGGTSYDALAQADVVIEAVFEDMAVKKAVFAELARVCKP 179
Query: 255 HCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDI 314
+LA+NTS +D++ I ++G HFFSPA++M LLE+V Q S V+ ++
Sbjct: 180 GAVLATNTSYLDIDEIAASVERASDVIGLHFFSPANIMKLLEVVVPAQVSADVVATAFEL 239
Query: 315 GKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLA 374
KK+KK P+ G C GF NR+ Y AA ++E G Y IDRA+ +FG PMGP+++
Sbjct: 240 AKKLKKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRAVREFGFPMGPYQVV 299
Query: 375 DLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKASPDP 433
DL G + AT + R I + E G+ T +G+YLY D R +PDP
Sbjct: 300 DLAGGDIGWATRKRRAPTRDPRLRYVEIPDRLCERGWFGQKTGRGYYLYPDGARVGTPDP 359
Query: 434 EVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIAS 493
EV+ I+ R+ GV P+ ++++I+ ++NE V E IA++ D+D
Sbjct: 360 EVEAIIDDERAKRGVT--PR--AFTDEEIIRRYLAAMINEGANVVHEKIALRPLDVDAVF 415
Query: 494 VMGMGFPPYR 503
+ G GFP YR
Sbjct: 416 LHGYGFPRYR 425
>gi|401678085|ref|ZP_10810055.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter sp. SST3]
gi|400214693|gb|EJO45609.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter sp. SST3]
Length = 715
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 261/514 (50%), Gaps = 34/514 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LT K ++ +A GLVD VV + L+ A + AL + +RP + + PLG
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQSILLEAAVELALKGRQAKRPL--PVRERVLAGPLG 224
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ +K N +DV+E G+ G +G EA+ F +L + ++
Sbjct: 225 RTLLFNMVGKKTEQKTKGNYPAAKRILDVIETGLSQGSSSGYAAEAKAFGELAMTPQSQA 284
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSN---YPVILKE 177
L IFFA K PG ++ AP R AI G G A + ++ PV +K+
Sbjct: 285 LRSIFFASTEVKKDPG-SEASPAPLR----AIGVLGGGLMGGGIAFVTASKGKLPVRIKD 339
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N K + + NL +VK+ + + +KT+++++G DY F D+VIEA+ E+
Sbjct: 340 INPKGINHALQYSWQNLDQKVKRRHIKASERDKTLAMISGTTDYSGFAHRDLVIEAVFED 399
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQQ+ AD+E++C PH I ASNTS++ + I + ++++G HFFSP MPL+E+
Sbjct: 400 LALKQQMVADVEQHCAPHTIFASNTSSLSIGDIAAKAARPEQVIGLHFFSPVEKMPLVEV 459
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TSPQ I ++ + KK KTPIVV + GF VNR+ PY A L+ G + +
Sbjct: 460 IPHATTSPQTIATVVKLAKKQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHV 519
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY------KSMIIPIMQEDKR 411
D A+ KFG P+GP +L D VG I TG + I E Y + I+ + +D R
Sbjct: 520 DEALVKFGFPVGPIQLLDEVG----IDTGTKIIPVL-EAAYGDRFSPPANIVSAILKDDR 574
Query: 412 AGETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFF 468
G +GFYLY + + S DP V I S +G KLS E
Sbjct: 575 KGRKNERGFYLYGAKGRKSKKQVDPSVYGLI----STTGQ------GKLSAVQCAERCVM 624
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E + A D DI +V G+GFPP+
Sbjct: 625 MMLNEAARCFGEQVIKSARDGDIGAVFGIGFPPF 658
>gi|410612697|ref|ZP_11323773.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
gi|410167810|dbj|GAC37662.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
Length = 698
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 183/511 (35%), Positives = 272/511 (53%), Gaps = 23/511 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIE--P 58
+M T P+ +A ++GL+D VV + L+S A +A +++ A L + +E
Sbjct: 150 LMTTGAPIAAAQALNIGLIDKVVEGD-LLSAALDFANEVIAQG----AELKRVSDLEVDK 204
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+ E F R K+ P ++ +EA + + GL+ E F + ++S
Sbjct: 205 TTASAEFFAEYRKTLSKRLRGQEAPHRIVECIEAALNTPFDEGLKVERRLFVECMQSSQS 264
Query: 119 KSLVHIFFAQRGTSKV---PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+L H+FFA+R +SKV P T L + +K+V I+GGGLMG GIA + PV L
Sbjct: 265 GALQHMFFAERMSSKVKDLPKDTQL----KDIKRVGIIGGGLMGGGIAMNFVNVGIPVTL 320
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E++++ L+ G + N V KGK+T E + ++TG DY D+D+VIEA+
Sbjct: 321 LEISQEALQRGKDLIAKNYAMTVSKGKLTVELATQRQDMITGTTDYNDLADMDLVIEAVF 380
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN+ +K+Q+FA L+ C ILASNTS D+NLI + T ++G HFFSPA+VM LL
Sbjct: 381 ENLDIKKQVFAKLDNVCKQGAILASNTSYQDVNLIAQSTSRPQDVIGLHFFSPANVMKLL 440
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EIVR ++TS +V+ + I K IKK P + C GF NRM Y + A L + G+
Sbjct: 441 EIVRGDETSDEVVATSMAIAKSIKKVPALSRVCYGFIGNRMLRHYAREAQLCLLEGSTPQ 500
Query: 356 LIDRAITKFGMPMGPFRLADLVG--FGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAG 413
ID + KFGM MGP + DL G G G+ + RTY I + E R G
Sbjct: 501 NIDAVMQKFGMAMGPLAVGDLAGIDIGYKAREGLTDEQKGDVRTY--CIADALYEMGRLG 558
Query: 414 ETTRKGFYLYD-ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
+ T G+Y YD E R+ S DP V + IE GV + +S+K I++ + F ++N
Sbjct: 559 QKTGAGYYQYDPETRQRSVDPVVMEVIEAQAKKRGV----ERKVISDKTILDRLTFALIN 614
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E ++ EGIA + +D+D+ G GFP YR
Sbjct: 615 EGFKILEEGIAQRPSDIDVVYAFGYGFPAYR 645
>gi|294010368|ref|YP_003543828.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
gi|292673698|dbj|BAI95216.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
Length = 689
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 264/505 (52%), Gaps = 19/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + + +K EA SLGLVDAVV L A +A ++ + D IE
Sbjct: 152 IITSGRQIKAAEALSLGLVDAVVDDAALAEEALAFARRVVADGGAKPRIRDRADAIEGDR 211
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E+F A ++ P I VEA V GL KE F++L+ S +
Sbjct: 212 NRPELFTAFAAANARRFKGFVAPAAIIGAVEAAVTLPFDEGLAKETALFERLVASPESAA 271
Query: 121 LVHIFFAQRGTSKVPGVTDLG--LAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
H+FFA+R ++VP D+G ++ ++ V ++G G MG GI + + P+ L E
Sbjct: 272 QRHVFFAEREAARVP---DIGPDISAIDIRSVGVIGAGTMGGGITMNFLNAGIPITLVET 328
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
++ L+ GI +R N ++ KG+MT + E+ + L++ LD + D D++IEA+ E++
Sbjct: 329 TQEALDRGIATIRRNYETTAAKGRMTAAQVEQRMGLISPSLDLAALADADLIIEAVYESM 388
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K IFA L++ ILASNTS +DLN I T + +VG HFFSPA+VM LLE+V
Sbjct: 389 DVKTDIFARLDRIAKLGAILASNTSFLDLNRIAAATSRPEWVVGLHFFSPANVMRLLEVV 448
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R TS V+ + + K+I K ++ G C GF NR+ P A ++ GT + ID
Sbjct: 449 RGAATSKPVVATAMRLAKRIGKVAVLSGVCDGFIANRLLAPRGAQAEAMMLEGTPIAEID 508
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
R + +G MG F++ DLVG V N ERT ++ R G+
Sbjct: 509 RVLVDYGFAMGHFQMMDLVGLDV-------IGRNATERTVMGDLVAA----GRLGQKRGA 557
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
G+Y YDE+R++ P I++ + GVA P ++ ++ + +PVVNE ++
Sbjct: 558 GYYDYDEKRRSRPSDVTGSLIKEVAAARGVAHAPTS---GDEALLARLLYPVVNEGAKIL 614
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA++A+D+DIA+V+G +P YR
Sbjct: 615 EEGIALRASDIDIAAVLGYNWPVYR 639
>gi|410897016|ref|XP_003961995.1| PREDICTED: peroxisomal bifunctional enzyme-like [Takifugu rubripes]
Length = 718
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 269/522 (51%), Gaps = 35/522 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDI----LEHRRPWVATLYKTDKI 56
++ T + V EA LG++D V N V A ++AL + L+ RR +
Sbjct: 150 LITTGRHVTAAEALQLGILDHVTEHNT-VDVAVKFALSVTGESLDGRR------ISSFSC 202
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
PL + +F+ A + R A P+ C+ V A G+++E E L S
Sbjct: 203 APLSDLDSLFEEAMLKVRGAARGAIAPVACVQAVRAAATLPYAQGMEREKELMATLFHSG 262
Query: 117 TCKSLVHIFFAQR--GTSKVPGVTDLGLA-PRRVKKVAILGGGLMGSGIATALILSNYPV 173
++L + FFAQR G P + PR V+K A++G G MG GI AL + V
Sbjct: 263 QARALQYFFFAQRAVGRWSTPSGARWDTSQPRPVRKAAVIGLGTMGRGITVALAQAGLSV 322
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
+ E + K L V + L+ +G T E T S ++ DVD+VIEA
Sbjct: 323 VAVETHAKQLMEAKKAVPSMLKRGAVRGGTTIEPDSITYSETV-----QAVADVDLVIEA 377
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
+ E+++LK+++F L C P +L +NTS++D++ + +T + +VG HFF+PAHVM
Sbjct: 378 VFEDMALKEKVFQQLSIVCKPDTLLCTNTSSLDVDHLASQTRHPELVVGMHFFAPAHVMK 437
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
LLE+V ++SP + + +GKK+ K + VGNC GFA NRM Y + AF L+E G
Sbjct: 438 LLEVVYGRRSSPAAVATAMQLGKKMGKVSVAVGNCRGFAGNRMLKRYLEQAFFLLEEGAT 497
Query: 354 LYLIDRAITKFGMPMGPFRLADL----VGFGVAIATGM--QFIENFPERTYK----SMII 403
L+DRA+ +FG PMG FR++DL VG+ V A G+ + R + S +
Sbjct: 498 PELVDRALEEFGFPMGVFRMSDLSGLDVGWRVRKADGLADTSLTGTSARVRQGCRYSPLG 557
Query: 404 PIMQEDKRAGETTRKGFYLYDE--RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T +G+Y YD+ R A DP + F+++ R+ G+ P+ + +++
Sbjct: 558 DLLCEHGRFGQKTGRGWYQYDKPGGRVAKSDPWLHNFLDEYRARHGLV--PRC--IDQQE 613
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++E F ++NE ++ EGIA D+D V G G+P +R
Sbjct: 614 VLERCLFVLINEGFQILEEGIAAGPEDIDAIYVFGYGWPRHR 655
>gi|430744232|ref|YP_007203361.1| 3-hydroxyacyl-CoA dehydrogenase [Singulisphaera acidiphila DSM
18658]
gi|430015952|gb|AGA27666.1| 3-hydroxyacyl-CoA dehydrogenase [Singulisphaera acidiphila DSM
18658]
Length = 718
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 160/505 (31%), Positives = 252/505 (49%), Gaps = 16/505 (3%)
Query: 5 SKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEARE 64
+P+ ++A LG++ V ++LV R+ +D + W + +PLG + +
Sbjct: 170 GQPLSAKKAAELGVIFDAVPADRLVDEGRRL-IDYFQESGEW--KRRREQARQPLGLSPD 226
Query: 65 IFKFARAQAR-----KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
F FA A A K P+ + ++ G GL+ E +L S
Sbjct: 227 QFTFAFATAEGLLQSKTKGQYPAPLAALKAIKEGCNLPLEQGLEAEKRVALELFGSPIAA 286
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+L+ IFF + + PGV + P +V +V ++G GLMG+GIA A S P + +V+
Sbjct: 287 NLIGIFFMKNRLAHDPGVDRTDVKPGQVDRVGVVGSGLMGAGIAAAHARSGIPTAMVDVD 346
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ L AGI + + SR+K G+ ++ L+ + D D+VIEAI EN
Sbjct: 347 DARLAAGIKQAEEVVLSRIKIGRAAPMDLADMLAELSTSTGHGILADRDVVIEAITENEE 406
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
K + L ILASNTSTI + + R VG HFFSP M L+E++R
Sbjct: 407 AKVATYKQLAGVLKEGTILASNTSTISITRMAAAAPDPSRFVGMHFFSPVDRMELVEVIR 466
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
TS + + ++ + K+I+KTPIVV +C GF VNR+ FPY A LL++ G + ID+
Sbjct: 467 GEATSDETVATIVALAKRIRKTPIVVRDCAGFLVNRVLFPYMNEALLLLQEGVPMDAIDK 526
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
A T FGMP+GP L D+VG + G +P+R ++ + + R G+ T G
Sbjct: 527 AATTFGMPVGPIALHDMVGLDTSFFAGKVLAAAYPDRATMPALLKDLVKAGRLGKKTGAG 586
Query: 420 FYLYDER-RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
F + + K + DP +E R+ S + L+ +I + +F P++ EA RV
Sbjct: 587 FRAHGGKSSKPAADPAFAPILEAHRTGS-------ESTLNAAEITDRLFLPMLLEATRVL 639
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGI + AD+D+ ++G+GFPP+R
Sbjct: 640 EEGIVREPADVDMGLILGIGFPPFR 664
>gi|289647496|ref|ZP_06478839.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. aesculi str. 2250]
Length = 721
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 167/520 (32%), Positives = 266/520 (51%), Gaps = 41/520 (7%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP +L + A LD R+P K DK+
Sbjct: 170 SGKENSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGELDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
++ +SL+ +F + K D + VK+ A+LG G+MG GIA + P+
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDA--VAKDVKQAAVLGAGIMGGGIAYQSAVKGTPI 340
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+EA
Sbjct: 341 LMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEA 400
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
++EN +KQ + A++E H ILASNTSTI ++L+ + + VG HFF+P H+MP
Sbjct: 401 VVENPKVKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMP 460
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R ++S + + + +K+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 461 LVEVIRGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVD 520
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKR 411
ID+ + KFG PMGP L D+VG E FP+R + ++ + E KR
Sbjct: 521 FVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKR 580
Query: 412 AGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDIV 463
G+ KGFY Y+ +K P DP V K + + R ++S++DI+
Sbjct: 581 LGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDII 628
Query: 464 EMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 629 NWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|289625348|ref|ZP_06458302.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|422582917|ref|ZP_16658048.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330867755|gb|EGH02464.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 721
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 167/520 (32%), Positives = 266/520 (51%), Gaps = 41/520 (7%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP +L + A LD R+P K DK+
Sbjct: 170 SGKENSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGELDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
++ +SL+ +F + K D + VK+ A+LG G+MG GIA + P+
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDA--VAKDVKQAAVLGAGIMGGGIAYQSAVKGTPI 340
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+EA
Sbjct: 341 LMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEA 400
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
++EN +KQ + A++E H ILASNTSTI ++L+ + + VG HFF+P H+MP
Sbjct: 401 VVENPKVKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMP 460
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R ++S + + + +K+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 461 LVEVIRGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVD 520
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKR 411
ID+ + KFG PMGP L D+VG E FP+R + ++ + E KR
Sbjct: 521 FVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKR 580
Query: 412 AGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDIV 463
G+ KGFY Y+ +K P DP V K + + R ++S++DI+
Sbjct: 581 LGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDII 628
Query: 464 EMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 629 NWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|260776409|ref|ZP_05885304.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607632|gb|EEX33897.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
coralliilyticus ATCC BAA-450]
Length = 707
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 264/506 (52%), Gaps = 19/506 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LT K ++ ++A LG+VDAVV L+ A+ + R K I G
Sbjct: 168 MILTGKQLRAKKAKKLGVVDAVVPETILLEVAKSFVEKHAGKSRAKRKVSTKEKLIANTG 227
Query: 61 EAREIFKFARAQAR---KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
R++ F +A + K N ++V+ G+ G G QKEA+ F +L+ +
Sbjct: 228 LGRKVI-FEQASKKTIEKTRGNYPAAEAILEVIRHGLEKGFEKGQQKEAQRFGELVMTSE 286
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILK 176
K+L IFFA K G P+ +++ A+LGGGLMG+GI+ ++ + PV +K
Sbjct: 287 SKALRSIFFATTEMKKENGSD---AEPKAIERAAVLGGGLMGAGISHVSVSKAKVPVRIK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
+V+ + + + K+ +++ + + + ++G D+ SF D+V+EA+ E
Sbjct: 344 DVSNDGVLNALKYNYKLFDKQRKRRIISKAQLQSKMLQMSGGTDFTSFNHADVVVEAVFE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+++LKQQ+ AD+EK I A+NTS++ ++ I ++ + IVG H+FSP MPL+E
Sbjct: 404 DLNLKQQMVADVEKNAKDTTIFATNTSSLPIHQIADKAQRPENIVGLHYFSPVEKMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++ TS + I +++ +K KTPIVV +C GF VNR+ PY A ++ G +
Sbjct: 464 VIPHETTSDETISTVVEFARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMSGEPIEQ 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+D+A+ FG P+GP L D VG + +E ER + I+ D R G T
Sbjct: 524 LDKALLNFGFPVGPITLLDEVGVDIGAKIMPILVEELGERFQGPDVFDILLNDNRKGRKT 583
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
KGFY Y ++K EV K + K S+S P+ +K++EKDI P++NEA R
Sbjct: 584 GKGFYTYKGKKK-----EVDKSVYKLLSLS-----PE-SKMAEKDIAMRCVLPMLNEAVR 632
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPY 502
EGI D DI ++ G+GFPP+
Sbjct: 633 CLDEGIIRSPRDGDIGAIFGIGFPPF 658
>gi|351709605|gb|EHB12524.1| Peroxisomal bifunctional enzyme [Heterocephalus glaber]
Length = 714
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 262/536 (48%), Gaps = 30/536 (5%)
Query: 12 EAHSLGLVDAVVAPNQLVSTAR--QWALD-ILEHRRPWVATLYKTDKIEPLGEAREIFKF 68
EA LG++D V+ + L + Q LD LE RR + L F
Sbjct: 152 EALKLGILDEVMKSDSLEEAIKFTQKILDQPLEPRR------ILNRPVPSLSNMENTFTE 205
Query: 69 ARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQ 128
A A+ RKQ P P C+ V+A + G++KE E FQ L S ++L + FFA+
Sbjct: 206 AFAKMRKQYPGYLAPETCVRSVQASMKYPYEEGIRKEEELFQYLRESGQARALQYAFFAE 265
Query: 129 RGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
R +K G + R + V +LG G MG GIA + PVI E ++K LEA
Sbjct: 266 RSVNKWSTPSGASWKTATARPISSVGVLGLGTMGRGIAISFARVGIPVIAVESDQKQLEA 325
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
V + L+ K M Q ++ + VD+VIEA+ E+++LK+Q+F
Sbjct: 326 AKKIVTSTLEKEAAK-SMQQSGQRESAPKPRFSSSMKELASVDLVIEAVFEDMNLKKQVF 384
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
A+L C P L +NTS +D++ I T ++G HFFSPAHVM L+E++ + +SP
Sbjct: 385 AELSAVCKPEAFLCTNTSALDVDEIAASTSRPQLVIGTHFFSPAHVMKLVEVIPSRHSSP 444
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
I ++++ KK+KK +VVGNC GF NRM PY + L+E G+ ID+A+ +FG
Sbjct: 445 TTIATVMNLSKKMKKIAVVVGNCYGFVGNRMLQPYFNQTYFLLEDGSKPEDIDQALEEFG 504
Query: 366 MPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIPIMQED-KRAGE 414
+ MGP R++DL G V TG P R + IP M D R G+
Sbjct: 505 LKMGPLRMSDLAGLDVGWKVRKGRGLTGPALPPGTPARKRGNARYSPIPDMLCDLGRFGQ 564
Query: 415 TTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
T +G+YLYD+ R PDP + KF+ + R I P+ + + +I E + ++N
Sbjct: 565 KTGQGWYLYDKPLGRVHKPDPWLSKFLSEYRETH--HIKPRV--IDQDEIRERCLYALIN 620
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCYFDQ 528
EA + EG+A +D+ + G G+P +R + + + L Y+ Q
Sbjct: 621 EAFHILGEGMAASPEHIDVIYLHGYGWPRHRGGPMFYASTVGLPTVLEKLQKYYQQ 676
>gi|28870678|ref|NP_793297.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. tomato str. DC3000]
gi|81730422|sp|Q87ZB2.1|FADB_PSESM RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|28853926|gb|AAO56992.1| fatty oxidation complex, alpha subunit [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 721
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 268/521 (51%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G+VDA+VAP +L + A D R+P K DK+
Sbjct: 170 SGKENSAEDALKVGVVDAIVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ + G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAAIFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G ++ R VK+ A+LG G+MG GIA + P
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + + + E
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEAN 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY+Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 INWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|407793797|ref|ZP_11140828.1| multifunctional fatty acid oxidation complex subunit alpha
[Idiomarina xiamenensis 10-D-4]
gi|407213951|gb|EKE83802.1| multifunctional fatty acid oxidation complex subunit alpha
[Idiomarina xiamenensis 10-D-4]
Length = 705
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/508 (35%), Positives = 268/508 (52%), Gaps = 19/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LT K ++ ++A GLVD VV + L+ A+Q AL + RR V +E
Sbjct: 165 MILTGKQLRPKQARKAGLVDDVVPRSILLEAAKQLALSS-KPRRAKVKHSGINKLLEGTS 223
Query: 61 EARE-IFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
R IFK A QA+ +A +P + ID ++ G G + GL +EAE F +L +E
Sbjct: 224 IGRNFIFKKAGEQAQAKAHG-NYPAIDAIIDSIKVGQEQGFKEGLSREAEHFGRLAMTEQ 282
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILK 176
+ L HIFFA K G G+ P +V++V +LGGGLMG GIA + + + P +K
Sbjct: 283 SRQLRHIFFATTAMKKETGAD--GVKPEKVERVGVLGGGLMGGGIAYVSAVNAKAPTRIK 340
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ EK + + + L +VK+ +T+ + E T+ L+G LDY F+ D+VIEA+ E
Sbjct: 341 DIAEKGIASALHYSYERLLKKVKRKHITRNELETTMLRLSGSLDYRGFERADIVIEAVFE 400
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++ LKQ++ AD+E++ H I ASNTS++ + I ++++G H+FSP MPL E
Sbjct: 401 DIELKQKMVADIEQHAAQHTIFASNTSSLPITKIAANAQRPEQVIGLHYFSPVEKMPLAE 460
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
I+ TS + I + ++ KTPIVV + GF VNR+ PY A LV G +
Sbjct: 461 IITHAGTSDKTIATTVAFARRQGKTPIVVKDGAGFYVNRILAPYMNEAARLVLAGEPIEK 520
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+D+A+ KFG P+GP +L D VG VA ER + +D R G+
Sbjct: 521 VDKALVKFGFPVGPMKLMDEVGIDVAAKVSPILAAELGERFQAPQAFQRLLDDDRKGKKN 580
Query: 417 RKGFYLYDERRKASP-DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KGFY Y ++ D V K + A++P +LSE+ I P++NEA
Sbjct: 581 GKGFYAYGGKQSGKKVDDSVYKTL---------AVEPS-GQLSEQQIAMRCVLPMLNEAV 630
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
EGI A D DI ++ G+GFPP+R
Sbjct: 631 YCLDEGIIRSARDGDIGAIFGIGFPPFR 658
>gi|332215007|ref|XP_003256628.1| PREDICTED: peroxisomal bifunctional enzyme isoform 1 [Nomascus
leucogenys]
Length = 723
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 272/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D VV + + + A++ + LE RR I+
Sbjct: 151 LITSGRHILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRR------LCNKPIQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + R+Q P C+ V+A V G++KE E F LL+S
Sbjct: 205 SLPNMDTIFSEALLKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + F A+R +K G + + R V V ++G G MG GI + + PVI
Sbjct: 265 ARALQYAFLAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 325 AVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E +SLK+Q+FA+L C P L +NTS +D++ I T +VG HFFSPAHVM L
Sbjct: 383 FEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVVGTHFFSPAHVMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY A+ L+E G+
Sbjct: 443 LEVIPSRYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG MGPFR++DL G V TG P R + IP
Sbjct: 503 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQDLTGPTLPPGTPARKRGNRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + KF+ + R I+P+ +S+ +
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETH--HIEPR--TISQDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EGIA +D+ + G G+P ++ + + +
Sbjct: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 679 LQKYYRQ 685
>gi|126172277|ref|YP_001048426.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella baltica OS155]
gi|386338955|ref|YP_006035321.1| fatty acid oxidation complex subunit FadB [Shewanella baltica
OS117]
gi|166971637|sp|A3CYJ4.1|FADB_SHEB5 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|125995482|gb|ABN59557.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Shewanella baltica OS155]
gi|334861356|gb|AEH11827.1| fatty oxidation complex, alpha subunit FadB [Shewanella baltica
OS117]
Length = 716
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/514 (33%), Positives = 253/514 (49%), Gaps = 20/514 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K + E+A +G VDAVVAP L + A Q D + + W A + L +
Sbjct: 169 TGKDQRAEDALKVGAVDAVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + V+E G LQ E + F KL +++ K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + V A+LG G+MG GIA P+++K++ +
Sbjct: 289 LIGIFLNDQFVKGK--AKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKI 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K Q+ A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+EI+R
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEIIRG 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D ID+
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R KS I +M E+KR G+
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586
Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY+Y + P DP ++ A + DI+ P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKAFEADDIIARTMIPMIIE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI A+ D+ V G+GFPP+R F
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>gi|336314685|ref|ZP_08569601.1| fatty oxidation complex, alpha subunit FadJ [Rheinheimera sp. A13L]
gi|335880984|gb|EGM78867.1| fatty oxidation complex, alpha subunit FadJ [Rheinheimera sp. A13L]
Length = 713
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 178/512 (34%), Positives = 270/512 (52%), Gaps = 28/512 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LT K ++ +A +GLVDAVV + L+ A Q AL +P + K+ +G
Sbjct: 172 MILTGKQLRAAQAKKIGLVDAVVPKSILLEAAVQLAL----KGKPAARDV----KLNFVG 223
Query: 61 EAREIFKFARA----QARKQAPNLTH-----PIVCIDVVEAGVVSGPRAGLQKEAEDFQK 111
+ E F RA QA KQ TH P+ + ++AGV G GL EA+ F +
Sbjct: 224 KVLEKTPFGRAIVFSQAEKQTLAKTHGNYPAPLKILKAIKAGVDGGFNKGLDVEAKAFGE 283
Query: 112 LLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SN 170
L + K+L +FFA K G D+ PR+V K AILGGGLMG GIA +
Sbjct: 284 LCMTSESKALRSLFFATTQMKKETGAGDV--VPRKVHKAAILGGGLMGGGIANVTATKAG 341
Query: 171 YPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMV 230
PV +K+++++ + + + L+ +++K +T+ + +K +SLLTG DY F DVD+V
Sbjct: 342 VPVRIKDISQQGISNAMKYSYSLLEKKLRKRFVTKTEVQKQMSLLTGTTDYSGFHDVDLV 401
Query: 231 IEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAH 290
+EA+ E+++LKQQ+ AD+E C H + ASNTS++ + I + + ++G H+FSP
Sbjct: 402 VEAVFEDLNLKQQMVADIETNCSEHTVFASNTSSLPIGQIAAKAARPENVIGLHYFSPVD 461
Query: 291 VMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVER 350
MPL+E++ ++TS + I + +K KTPIVV + GF VNR+ Y A ++
Sbjct: 462 KMPLVEVIAHDKTSAETIATTVAFARKQGKTPIVVKDGAGFYVNRILALYMNEAANILLE 521
Query: 351 GTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDK 410
G + +D+A+ KFG P+GP L D VG V ++ ER + D
Sbjct: 522 GEPVEALDKALVKFGFPVGPITLLDEVGIDVGAKISPILLKELGERFAAPAAFDRLLADG 581
Query: 411 RAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
R G KGFYLY + K KK ++ A + + ++P AKL I +
Sbjct: 582 RKGRKAEKGFYLYGAKAKG------KKQVD-ASVYTILGLNPA-AKLGGDQIALRCVVQM 633
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
+NEA R EGI A D DI ++ G+GFPP+
Sbjct: 634 LNEAVRCLEEGIISSARDGDIGAIFGIGFPPF 665
>gi|294146602|ref|YP_003559268.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
gi|292677019|dbj|BAI98536.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
Length = 695
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/502 (33%), Positives = 259/502 (51%), Gaps = 24/502 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML+ KPV E+A S G + + + AL++ P L +T +
Sbjct: 153 MMLSGKPVTAEQAASSG-----LVDRLVDDDVVEAALEVARGAPP----LRRTGALPVPV 203
Query: 61 EAREIFKFARAQAR---KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ E RA+ R QAP + C+ + + AGL EA F +L+RSE
Sbjct: 204 DLAEAVDARRAKLRAGLSQAP--ARIVDCVAALSDDLA----AGLALEARLFGELMRSEA 257
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+ L H FF +R +++PG+ + + GG LMG+GIA AL+ + PV + E
Sbjct: 258 SRGLRHAFFGERTVARIPGLAADVRPRDVRRVGVVGGG-LMGTGIALALLNAGVPVTMVE 316
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + L +R +Q V+KG++ Q+ + ++ T + E+ + D+VIEA+ E+
Sbjct: 317 LRAEALSKAEAAIRKTIQRDVEKGRIGQDAADARMAAFTSATELEALAEADLVIEAVFED 376
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+Q+F+ L+ P ILASNTST+DL+ I R+VG HFFSPA++M LLE+
Sbjct: 377 MGVKKQVFSALDAITRPDAILASNTSTLDLDAIAALVADPSRVVGLHFFSPANIMRLLEV 436
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VR T+P V+ + +GK+I K +V G C GF NRMF Y + + L+E G I
Sbjct: 437 VRGRDTAPDVLATAMALGKRIGKVGVVSGVCDGFIGNRMFEEYLRQVYFLLEEGALPQQI 496
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ ++GM MGP R DL G + A + P+R Y +I I E R G+ +
Sbjct: 497 DAAMERWGMAMGPCRTMDLAGHDIGWAIRKRRAVEQPDRPYSGVIDRIC-ELGRFGQKSG 555
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
KG Y+Y + R A DPE+ + IE + G+ + + +++IV +VNE +
Sbjct: 556 KGIYVYPDGRTAQTDPEITRLIEDYSAEIGL----QRRAIGDEEIVGRCLLALVNEGAHI 611
Query: 478 FAEGIAVKAADLDIASVMGMGF 499
EGIA + D+D+ + G GF
Sbjct: 612 LEEGIAYRPVDIDMIYLHGYGF 633
>gi|332215009|ref|XP_003256629.1| PREDICTED: peroxisomal bifunctional enzyme isoform 2 [Nomascus
leucogenys]
Length = 627
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 272/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D VV + + + A++ + LE RR I+
Sbjct: 55 LITSGRHILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRR------LCNKPIQ 108
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + R+Q P C+ V+A V G++KE E F LL+S
Sbjct: 109 SLPNMDTIFSEALLKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQ 168
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + F A+R +K G + + R V V ++G G MG GI + + PVI
Sbjct: 169 ARALQYAFLAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVI 228
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 229 AVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAV 286
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E +SLK+Q+FA+L C P L +NTS +D++ I T +VG HFFSPAHVM L
Sbjct: 287 FEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVVGTHFFSPAHVMKL 346
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY A+ L+E G+
Sbjct: 347 LEVIPSRYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKP 406
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG MGPFR++DL G V TG P R + IP
Sbjct: 407 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQDLTGPTLPPGTPARKRGNRRYCPIP 466
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + KF+ + R I+P+ +S+ +
Sbjct: 467 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETH--HIEPR--TISQDE 522
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EGIA +D+ + G G+P ++ + + +
Sbjct: 523 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 582
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 583 LQKYYRQ 589
>gi|397470061|ref|XP_003806653.1| PREDICTED: peroxisomal bifunctional enzyme [Pan paniscus]
Length = 723
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 272/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D VV + + + A++ + LE RR I+
Sbjct: 151 LITSGRRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRR------LCNKPIQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + R+Q P C+ V+A V G++KE E F LL+S
Sbjct: 205 SLPYMDSIFSEALLKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L H FFA+R +K G + + R V V ++G G MG GI + + PVI
Sbjct: 265 ARALQHAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 325 AVDSDKNQLAIANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E +SLK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 383 FEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY A+ L+E G+
Sbjct: 443 LEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG MGPFR++DL G V TG P R + IP
Sbjct: 503 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + KF+ + R I+P+ +S+ +
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETH--HIEPR--TISQDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA + EGIA +D+ + G G+P ++ + + +
Sbjct: 619 ILERCLYSLINEAFCILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 679 LQKYYRQ 685
>gi|71734566|ref|YP_275370.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|416017422|ref|ZP_11564541.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. glycinea str. B076]
gi|416027901|ref|ZP_11571075.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. glycinea str. race 4]
gi|83288143|sp|Q48GW3.1|FADB_PSE14 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|71555119|gb|AAZ34330.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|320323884|gb|EFW79968.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. glycinea str. B076]
gi|320328021|gb|EFW84026.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. glycinea str. race 4]
Length = 721
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 265/520 (50%), Gaps = 41/520 (7%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP +L + A D R+P K DK+
Sbjct: 170 SGKESSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
++ +SL+ +F + K D + VK+ A+LG G+MG GIA + P+
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDA--VAKDVKQAAVLGAGIMGGGIAYQSAVKGTPI 340
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+EA
Sbjct: 341 LMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEA 400
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
++EN +KQ + A++E H ILASNTSTI ++L+ + + VG HFF+P H+MP
Sbjct: 401 VVENPKVKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMP 460
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R ++S + + + +K+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 461 LVEVIRGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVD 520
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKR 411
ID+ + KFG PMGP L D+VG E FP+R + ++ + E KR
Sbjct: 521 FVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKR 580
Query: 412 AGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDIV 463
G+ KGFY Y+ +K P DP V K + + R ++S++DI+
Sbjct: 581 LGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDII 628
Query: 464 EMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 629 NWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|334124992|ref|ZP_08498986.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Enterobacter hormaechei
ATCC 49162]
gi|333387562|gb|EGK58756.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Enterobacter hormaechei
ATCC 49162]
Length = 715
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 174/513 (33%), Positives = 259/513 (50%), Gaps = 32/513 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
M+LT K ++ +A GLVD VV L+ A + AL + +RP L ++I P
Sbjct: 167 MILTGKQLRARQALKAGLVDEVVPHTILLEAAVERALKGRQAKRP----LPVRERILAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
LG A + + +K N ++V+E G+ G +G EA+ F +L +
Sbjct: 223 LGRALLFNRVGKKTGQKTKGNYPATTRILEVIETGLSQGSSSGYAAEAKAFGELAMTPQS 282
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
++L IFFA K PG ++ AP R V G G TA PV +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SEAEPAPLRAVGVLGGGLMGGGIAFVTA-SKGKLPVRIKDI 340
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N K + + NL +VK+ + + +KT++++TG DY F D+VIEA+ E++
Sbjct: 341 NPKGINHALQYSWQNLDRKVKRRHIKASERDKTLAMITGTTDYSGFAHRDLVIEAVFEDL 400
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+LKQQ+ AD+E++C PH I ASNTS++ + I + ++++G H+FSP MPL+E++
Sbjct: 401 ALKQQMVADVEQHCAPHTIFASNTSSLPIGDIAAKAARPEQVIGLHYFSPVEKMPLVEVI 460
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
TSPQ I ++ + KK KTPIVV + GF VNR+ PY A L+ G + +D
Sbjct: 461 PHATTSPQTIATVVKLAKKQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVD 520
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIP------IMQEDKRA 412
A+ KFG P+GP +L D VG I TG + I E Y P + +D R
Sbjct: 521 EALVKFGFPVGPIQLLDEVG----IDTGTKIIPVL-EAAYGDRFAPPANVVSAILKDDRK 575
Query: 413 GETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
G +GFYLY + + S DP V I ++G KLS E
Sbjct: 576 GRKNERGFYLYAAKGRKSKKQIDPSVYALI----PVTGQ------GKLSAVQCAERCVMM 625
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E + A D DI +V G+GFPP+
Sbjct: 626 MLNEAARCFGEQVIKSARDGDIGAVFGIGFPPF 658
>gi|167822522|ref|ZP_02453993.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 9]
Length = 476
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 230/426 (53%), Gaps = 7/426 (1%)
Query: 79 NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVT 138
L P +D V A + GL+ E F + L S LVH FFAQR +K P T
Sbjct: 4 GLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSP-ET 62
Query: 139 DLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRV 198
G APR ++++ ++GGG MG+GIA A + S +PV + E ++ LE G V V
Sbjct: 63 RRG-APRAIERIGVVGGGTMGAGIAVAALDSGFPVTMIERDDASLERGRAHVEKVYAGLV 121
Query: 199 KKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCIL 258
KG+MT ++ G YE+ D+VIEA+ E++++K+ +FA+L + C P +L
Sbjct: 122 AKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVL 181
Query: 259 ASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKI 318
A+NTS +D++ + ++G HFFSPA++M LLE+V + S V+ ++ +K+
Sbjct: 182 ATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKL 241
Query: 319 KKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVG 378
K P+ G C GF NR+ Y AA ++E G Y IDRAI +FG PMGP+++ DL G
Sbjct: 242 GKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAG 301
Query: 379 FGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKASPDPEVKK 437
+ AT + R I + E G+ T +G+YLY D R +PDPEV+
Sbjct: 302 GDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEA 361
Query: 438 FIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGM 497
I +AR+ GV+ P+ ++++IV ++NE V E IA++ D+D + G
Sbjct: 362 IIAQARAAKGVS--PR--AFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGY 417
Query: 498 GFPPYR 503
GFP +R
Sbjct: 418 GFPRHR 423
>gi|222112189|ref|YP_002554453.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax ebreus TPSY]
gi|221731633|gb|ACM34453.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax ebreus
TPSY]
Length = 705
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 167/508 (32%), Positives = 257/508 (50%), Gaps = 17/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEH----RRPWVATLYKTDKI 56
+ML+ K + + A + GLVD +V V+ +A ++L RR + KI
Sbjct: 157 LMLSGKHLSAKAAAAAGLVDRLVEGTDPVAAGLAYANELLAQGAQPRR------TRDLKI 210
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
AR + K+ L P ++ V A V G+ KE F + L S
Sbjct: 211 ADQAAARAELDALALETAKKTRGLFSPGKIVECVRAAVELPFDEGIAKERALFVECLNSP 270
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+ LVH FFA+R T+K+P APR K+AI+GGG MG+GI + + + V +
Sbjct: 271 QRQGLVHAFFAERETAKIPEAQ--AAAPRHFAKIAIIGGGTMGAGITVSALDAGLTVTMI 328
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E + + + G V + KG+MT E ++ T Y+ DVD+VIEA+ E
Sbjct: 329 ERDAESIARGQKNVEKVYDGLIAKGRMTAEGKAAILARYTPSTRYDDIADVDLVIEAVFE 388
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++ +K+ +F +L++ C P +LA+NTS +D++ I T ++G HFFSPA++M LLE
Sbjct: 389 DLEVKKAVFKELDRVCKPGAVLATNTSYLDIDAIAAATSRPQDVIGLHFFSPANIMKLLE 448
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
IV + +P V+ + KK+KK P+ G C GF NR+ Y QAA L+E G Y
Sbjct: 449 IVVPAKVAPDVVTTAFALAKKMKKVPVRAGVCDGFIGNRILAVYKQAADYLMEDGASPYE 508
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
ID A+ FG MGPF++ DL G + AT + + + + E G+ T
Sbjct: 509 IDEAVRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPQARYVEVADRVCERGWFGQKT 568
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
+GFYLY + R PDPEV ++ R+ G I P+ + + +I+ +VNE
Sbjct: 569 GRGFYLYPQGARVGQPDPEVLAIVDAERAKKG--ITPR--QFTADEIMRRYMAAMVNEGA 624
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
+V EGIA++ D+D+ + G GFP +R
Sbjct: 625 KVVQEGIALRPLDVDVTFLSGYGFPRWR 652
>gi|157161829|ref|YP_001459147.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli HS]
gi|432671414|ref|ZP_19906943.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE119]
gi|166972669|sp|A8A2L0.1|FADJ_ECOHS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|157067509|gb|ABV06764.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli HS]
gi|431210333|gb|ELF08395.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE119]
Length = 714
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 262/513 (51%), Gaps = 32/513 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
M+LT K ++ ++A LGLVD VV P+ ++ A A+++ + RP L ++I P
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVV-PHSILLEA---AVELAKKDRPSSRPLPVRERILAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
LG A + K N ++VVE G+ G +G EA F +L +
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
++L IFFA K PG +D AP + V ILGGGLMG+GIA + PV +K+
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAP--LNSVGILGGGLMGAGIAYVTACKAGLPVRIKD 339
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N + + + L+ +V++ + + +K ++L++G DY F D++IEA+ EN
Sbjct: 340 INPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFEN 399
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ LKQQ+ A++E+ C H I ASNTS++ + I ++++G HFFSP MPL+EI
Sbjct: 400 LELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEI 459
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS Q I + + KK KTPIVV + GF VNR+ PY A ++ G + I
Sbjct: 460 IPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHI 519
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRA 412
D A+ KFG P+GP +L D VG I TG + I + ER + + ++ + D R
Sbjct: 520 DAALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSAPANVVSSILNDDRK 575
Query: 413 GETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
G +GFYLY ++ + S DP + I +LS + E
Sbjct: 576 GRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQ----------GRLSAPQVAERCVML 625
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R E + D DI +V G+GFPP+
Sbjct: 626 MLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPF 658
>gi|167892607|ref|ZP_02480009.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 7894]
Length = 478
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 232/430 (53%), Gaps = 7/430 (1%)
Query: 75 KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKV 134
+ + L P +D V A + GL+ E F + L S LVH FFAQR +K
Sbjct: 2 RHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKS 61
Query: 135 PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANL 194
P T G APR ++++ ++GGG MG+GIA A + + +PV + E ++ LE G V
Sbjct: 62 P-ETRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVY 119
Query: 195 QSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPP 254
V KG+MT ++ G YE+ D+VIEA+ E++++K+ +FA+L + C P
Sbjct: 120 AGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKP 179
Query: 255 HCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDI 314
+LA+NTS +D++ + ++G HFFSPA++M LLE+V + S V+ ++
Sbjct: 180 GAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFEL 239
Query: 315 GKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLA 374
+K+ K P+ G C GF NR+ Y AA ++E G Y IDRAI +FG PMGP+++
Sbjct: 240 ARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVV 299
Query: 375 DLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKASPDP 433
DL G + AT + R I + E G+ T +G+YLY D R +PDP
Sbjct: 300 DLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDP 359
Query: 434 EVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIAS 493
EV+ I +AR+ GV+ P+ ++++IV ++NE V E IA++ D+D
Sbjct: 360 EVEAIIAQARAAKGVS--PR--AFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVF 415
Query: 494 VMGMGFPPYR 503
+ G GFP +R
Sbjct: 416 LHGYGFPRHR 425
>gi|261340726|ref|ZP_05968584.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
cancerogenus ATCC 35316]
gi|288317143|gb|EFC56081.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
cancerogenus ATCC 35316]
Length = 715
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 174/511 (34%), Positives = 263/511 (51%), Gaps = 28/511 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
M+LT K ++ +A GLVD VV L+ A + AL + +RP L ++I P
Sbjct: 167 MILTGKQLRARQALKAGLVDEVVPQAILLDAAVERALKGRQAKRP----LPVRERILAGP 222
Query: 59 LGEAREIFKFA-RAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
LG A +FK A + +K N ++V+E G+ G +G EA+ F +L +
Sbjct: 223 LGRA-VLFKLAGKKTEQKTRGNYPAAKRILEVIETGLSQGASSGYAAEAKAFGELAMTPQ 281
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L +IFFA K PG +D AP + V G G TA PV +K+
Sbjct: 282 SQALRNIFFASTEVKKDPG-SDAAPAPLQAVGVLGGGLMGGGIAFVTA-SKGKLPVRIKD 339
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N K + + NL +VK+ + + +KT++++TG DY F+ D+VIEA+ E+
Sbjct: 340 INAKGINHALQYSWQNLDRKVKRRHIKASERDKTLAMITGTTDYSGFRHRDLVIEAVFED 399
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQQ+ AD+E +C PH I ASNTS+I + I ++++G HFFSP MPL+E+
Sbjct: 400 LALKQQMVADVEAHCAPHTIFASNTSSIPIGEIAANAARPEQVIGLHFFSPVEKMPLVEV 459
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ T PQ + ++ + KK KTPIVV + GF VNR+ PY A L+ G + +
Sbjct: 460 IPHANTCPQTVATVVKLAKKQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHV 519
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY------KSMIIPIMQEDKR 411
D A+ FG P+GP +L D VG I TG + I E Y + I+ + +D R
Sbjct: 520 DEALVNFGFPVGPIQLLDEVG----IDTGTKIIPVL-EAAYGDRFSPPANIVSAILKDDR 574
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G +GFYLY + + S KK ++ S+ G+ +LS E ++
Sbjct: 575 KGRKNERGFYLYAAKGRKS-----KKQVDP--SVYGLITTTGQGRLSAAQCAERCVMMML 627
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
NEA R F E + A D DI +V G+GFPP+
Sbjct: 628 NEAARCFGEQVVKSARDGDIGAVFGIGFPPF 658
>gi|160873146|ref|YP_001552462.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella baltica OS195]
gi|378706382|ref|YP_005271276.1| fatty acid oxidation complex subunit FadB [Shewanella baltica
OS678]
gi|418022961|ref|ZP_12661947.1| Fatty acid oxidation complex subunit alpha [Shewanella baltica
OS625]
gi|189044411|sp|A9KU91.1|FADB_SHEB9 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|160858668|gb|ABX47202.1| fatty oxidation complex, alpha subunit FadB [Shewanella baltica
OS195]
gi|315265371|gb|ADT92224.1| fatty oxidation complex, alpha subunit FadB [Shewanella baltica
OS678]
gi|353537963|gb|EHC07519.1| Fatty acid oxidation complex subunit alpha [Shewanella baltica
OS625]
Length = 716
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 253/514 (49%), Gaps = 20/514 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K + E+A +G VDAVVAP L + A Q D + + W A + L +
Sbjct: 169 TGKDQRAEDALKVGAVDAVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + V+E G LQ E + F KL +++ K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + V A+LG G+MG GIA P+++K++ +
Sbjct: 289 LIGIFLNDQFVKGK--AKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKI 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K Q+ A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+E++R
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D ID+
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R KS I +M E+KR G+
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586
Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY+Y + P DP ++ A + DI+ P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKAFEADDIIARTMIPMIIE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI A+ D+ V G+GFPP+R F
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>gi|120612950|ref|YP_972628.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
gi|120591414|gb|ABM34854.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Acidovorax
citrulli AAC00-1]
Length = 710
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/506 (32%), Positives = 254/506 (50%), Gaps = 13/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML+ KP+ A + GLVD +V + V+ L + + A L +T +
Sbjct: 158 MMLSGKPLNARAALAAGLVDRLVDGSDPVAAG----LACVRELQAAQAPLRRTRDVAIAD 213
Query: 61 EAREIFKFARAQAR--KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
A + A +++ L P+ ++ V V G+Q+E F + L S
Sbjct: 214 RAAALADLDALAADTARKSRGLFSPLKIVECVRNAVELPFDEGMQRERAAFMECLASPQR 273
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
L+H FFA+R +KVP APR V +A++GGG MG+GI + + + PV + E
Sbjct: 274 AGLIHAFFAEREVAKVPEAK--AAAPRPVASIAVIGGGTMGAGITVSALDAGLPVTMIER 331
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
++ L G V + KG+MT + ++ TG YE D+VIEA+ E++
Sbjct: 332 DDASLARGRAHVEKVYDGLIAKGRMTADAKAAVMARYTGSTRYEDIAAADLVIEAVFEDL 391
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K+ +F +L++ C P +LA+NTS +D++ I T ++G HFFSPA++M LLEIV
Sbjct: 392 EVKKAVFRELDRVCKPGAVLATNTSYLDIDAIAAATGRPRDVIGLHFFSPANIMKLLEIV 451
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
+ V+ + K++KK P+ G C GF NR+ Y QAA L+E G Y ID
Sbjct: 452 VPAKVGADVVATAFALAKQLKKVPVRAGVCDGFIGNRILAVYKQAADYLMEDGASPYEID 511
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ FG PMGPF++ DL G + AT + + I + E G+ T +
Sbjct: 512 AAVRGFGYPMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEIADRICERGWFGQKTGR 571
Query: 419 GFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
GFYLY E R PDPEV ++ R+ GV P+ + +I+ +VNE +V
Sbjct: 572 GFYLYPEGARTGQPDPEVLAIVDAERAKKGVV--PR--SFTPHEIMRRYMAAMVNEGAKV 627
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGIA++ D+D+ + G GFP +R
Sbjct: 628 VEEGIALRPLDVDVTFLSGYGFPRFR 653
>gi|167901102|ref|ZP_02488307.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei NCTC 13177]
Length = 495
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 232/430 (53%), Gaps = 7/430 (1%)
Query: 75 KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKV 134
+ + L P +D V A + GL+ E F + L S LVH FFAQR +K
Sbjct: 19 RHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKS 78
Query: 135 PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANL 194
P T G APR ++++ ++GGG MG+GIA A + + +PV + E ++ LE G V
Sbjct: 79 P-ETRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVY 136
Query: 195 QSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPP 254
V KG+MT ++ G YE+ D+VIEA+ E++++K+ +FA+L + C P
Sbjct: 137 AGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKP 196
Query: 255 HCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDI 314
+LA+NTS +D++ + ++G HFFSPA++M LLE+V + S V+ ++
Sbjct: 197 GAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFEL 256
Query: 315 GKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLA 374
+K+ K P+ G C GF NR+ Y AA ++E G Y IDRAI +FG PMGP+++
Sbjct: 257 ARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVV 316
Query: 375 DLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKASPDP 433
DL G + AT + R I + E G+ T +G+YLY D R +PDP
Sbjct: 317 DLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDP 376
Query: 434 EVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIAS 493
EV+ I +AR+ GV+ P+ ++++IV ++NE V E IA++ D+D
Sbjct: 377 EVEAIIAQARAAKGVS--PR--AFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVF 432
Query: 494 VMGMGFPPYR 503
+ G GFP +R
Sbjct: 433 LHGYGFPRHR 442
>gi|167736895|ref|ZP_02409669.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 14]
Length = 490
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 232/430 (53%), Gaps = 7/430 (1%)
Query: 75 KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKV 134
+ + L P +D V A + GL+ E F + L S LVH FFAQR +K
Sbjct: 14 RHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKS 73
Query: 135 PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANL 194
P T G APR ++++ ++GGG MG+GIA A + + +PV + E ++ LE G V
Sbjct: 74 P-ETRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVY 131
Query: 195 QSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPP 254
V KG+MT ++ G YE+ D+VIEA+ E++++K+ +FA+L + C P
Sbjct: 132 AGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKP 191
Query: 255 HCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDI 314
+LA+NTS +D++ + ++G HFFSPA++M LLE+V + S V+ ++
Sbjct: 192 GAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFEL 251
Query: 315 GKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLA 374
+K+ K P+ G C GF NR+ Y AA ++E G Y IDRAI +FG PMGP+++
Sbjct: 252 ARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVV 311
Query: 375 DLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKASPDP 433
DL G + AT + R I + E G+ T +G+YLY D R +PDP
Sbjct: 312 DLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDP 371
Query: 434 EVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIAS 493
EV+ I +AR+ GV+ P+ ++++IV ++NE V E IA++ D+D
Sbjct: 372 EVEAIIAQARAAKGVS--PR--AFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVF 427
Query: 494 VMGMGFPPYR 503
+ G GFP +R
Sbjct: 428 LHGYGFPRHR 437
>gi|347821277|ref|ZP_08874711.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 412
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/362 (38%), Positives = 215/362 (59%), Gaps = 7/362 (1%)
Query: 144 PRR-VKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGK 202
PRR ++ VA++G G MG GIA + + PV + E ++ L+ G+ +R N +S+VKKGK
Sbjct: 6 PRREIRAVAVIGAGTMGGGIAMNFLNAGIPVKILETRQEALDRGMATMRKNYESQVKKGK 65
Query: 203 MTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNT 262
+TQE++ + ++LL+ LDY KD D+ IEA+ E + +K+ +F L+ P ILASNT
Sbjct: 66 LTQEQYTQRMALLSPTLDYADLKDADLFIEAVFEEMGVKEAVFRQLDAVAKPGAILASNT 125
Query: 263 STIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTP 322
ST+D++ I T ++G HFFSPA+VM LLE+VR QT+ V+ ++ +GK+IKKT
Sbjct: 126 STLDVDRIAACTRRPQDVLGMHFFSPANVMKLLEVVRGKQTAKDVLATVMALGKRIKKTC 185
Query: 323 IVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVA 382
++ G C GF NRM Y + A L++ G +D+A+ FG MGPFR++DL G +
Sbjct: 186 VLSGVCDGFIGNRMLEQYVRQAGFLLDEGCTPQQVDQAMESFGFAMGPFRVSDLAGNDIG 245
Query: 383 IATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE-RRKASPDPEVKKFIEK 441
A + E Y S + E R G+ T G+Y Y +R A P V+ IE
Sbjct: 246 WAIRKRRAVERAEMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSALVETLIED 304
Query: 442 ARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPP 501
R G I P+ K++E++IV+ + F ++NE + +GIA K++D+D+ + G GFP
Sbjct: 305 QRKELG--ITPR--KIAEEEIVQRLVFALINEGAHILEDGIASKSSDIDMVYITGYGFPL 360
Query: 502 YR 503
+R
Sbjct: 361 HR 362
>gi|217971236|ref|YP_002355987.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella baltica OS223]
gi|254788578|sp|B8E3R3.1|FADB_SHEB2 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|217496371|gb|ACK44564.1| fatty oxidation complex, alpha subunit FadB [Shewanella baltica
OS223]
Length = 716
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 253/514 (49%), Gaps = 20/514 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K + E+A +G VDAVVAP L + A Q D + + W A + L +
Sbjct: 169 TGKDQRAEDALKVGAVDAVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + V+E G LQ E + F KL +++ K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + V A+LG G+MG GIA P+++K++ +
Sbjct: 289 LIGIFLNDQFVKGK--AKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKI 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K Q+ A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+E++R
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D ID+
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R KS I +M E+KR G+
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586
Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY+Y + P DP ++ A + DI+ P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKAFEADDIIARTMIPMIIE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI A+ D+ V G+GFPP+R F
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>gi|388544823|ref|ZP_10148109.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. M47T1]
gi|388277132|gb|EIK96708.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. M47T1]
Length = 715
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 173/513 (33%), Positives = 263/513 (51%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A G VDAVVAP++L V A D R+P K DK+
Sbjct: 170 SGKENRAEDALKAGAVDAVVAPDKLQAAALDLVKRAISGEFDHKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SLV +F Q K +L R V + A+LG G+MG GIA + P
Sbjct: 283 KTSAAQSLVGLFLNDQELKRKAKAYDELA---RDVNQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++NEK +E G+ L RV+KG++T K + ++ + L Y F VD+V+E
Sbjct: 340 ILMKDINEKGIEQGLAEASKLLGKRVEKGRLTPAKMAEALNAIRPTLSYGDFGHVDIVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEAQVKDDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGI 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D +D+ + KFG PMGP L D+VG E FP+R + I ++ E K
Sbjct: 520 DFVRVDKIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAK 579
Query: 411 RAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
R G+ KGFY Y+ +K P KK + + I + +LS++DI+ + P+
Sbjct: 580 RLGQKNGKGFYAYETDKKGKP----KKVADASVLEVLKPIVYEQRELSDEDILNWMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|378581836|ref|ZP_09830479.1| fatty acid oxidation complex subunit alpha [Pantoea stewartii
subsp. stewartii DC283]
gi|377815574|gb|EHT98686.1| fatty acid oxidation complex subunit alpha [Pantoea stewartii
subsp. stewartii DC283]
Length = 727
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 173/528 (32%), Positives = 260/528 (49%), Gaps = 43/528 (8%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILE---HRRPWVATLYKTDKIE 57
++ K V G EA LGLVDAVV+ ++L R AL +L+ H W A + K+
Sbjct: 166 IIAAGKDVDGVEALKLGLVDAVVSNDKL----RDAALTMLKAAAHDGSWRAR--RAPKLA 219
Query: 58 PLG----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKL 112
PL EA F A+ + A + P+ + +EA G L+ E F L
Sbjct: 220 PLKLSPVEAAMSFTIAKGMVMQTAGKHYPAPVTAVKTIEAAAALGRDDALKLETAAFVPL 279
Query: 113 LRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRV------KKVAILGGGLMGSGIATAL 166
+S+ ++LV IF + LA +R ++ A+LG G+MG GI+
Sbjct: 280 AQSDVARALVGIFLNDQYIKS--------LAKKRSSESGTPRQAAVLGAGIMGGGISYQS 331
Query: 167 ILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKD 226
PV +K++N + L G+ L ++++GK+ K I+ + LDY F
Sbjct: 332 AWKGVPVKMKDINPQALTLGMNEASKLLNKQLERGKIDGNKLASVIATIQPTLDYAGFDQ 391
Query: 227 VDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFF 286
D+V+EA++EN +K + A+ E + ILASNTSTI ++ + + + G HFF
Sbjct: 392 ADIVVEAVVENPKIKASVLAETETHMRADAILASNTSTIPISHLAQALQRPENFCGMHFF 451
Query: 287 SPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFL 346
+P MPL+E++R +TS + ++ K+ KTP+VV +C GF VNR+ FPY A +
Sbjct: 452 NPVPRMPLVEVIRGEKTSEATLGKVVAWASKMGKTPVVVNDCPGFFVNRVLFPYFAAFGM 511
Query: 347 LVERGTDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--II 403
L+ G D ID+ + K FG PMGP L D+VG A + FPER K I
Sbjct: 512 LLRDGADFRQIDKVMEKQFGWPMGPSWLLDVVGIDTAHHAQSVMADGFPERMKKDYRDAI 571
Query: 404 PIMQEDKRAGETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSE 459
I+ E KR G+ GF+ ++E +K P D EV +E A PK S+
Sbjct: 572 DILFEAKRFGQKNGLGFWRWEEDKKGKPKKVSDAEVDALLEP-------ACQPKRI-FSD 623
Query: 460 KDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
+ I+ + P++NE R E I A+ D+A V G+GFPP+R F
Sbjct: 624 EKILNRMMLPMLNEVVRCLEEKIIASPAEADMALVYGLGFPPFRGGAF 671
>gi|422657214|ref|ZP_16719656.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. lachrymans str. M302278]
gi|331015789|gb|EGH95845.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. lachrymans str. M302278]
Length = 721
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 267/521 (51%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G+VDA+VAP +L + A D R+P K DK+
Sbjct: 170 SGKENSAEDALKVGVVDAIVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAASFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G ++ R VK+ A+LG G+MG GIA + P
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + + + E
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHTGRDVMAEGFPDRMKDDRRSAVDALYEAN 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY+Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 INWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|134279808|ref|ZP_01766520.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 305]
gi|134249008|gb|EBA49090.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 305]
Length = 708
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 259/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + EEA +LGLVD + + ++ + ++L V +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAAG-AGVRRTRDAQGLADRA 217
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A ARA + + L P +D V A + GL+ E F + L S
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR +K P T G APR ++++ ++GGG MG+GIA A + + +PV + E ++
Sbjct: 278 LVHAFFAQREAAKSP-ETRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE G V V KG+MT ++ G YE+ D+VIEA+ E++++
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA++M LLE+V
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ ++ +K+ K P+ G C GF NR+ Y AA ++E G Y IDRA
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I +FG PMGP+++ DL G + AT + R I + E G+ T +G+
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R + DPEV+ I +AR+ GV+ P+ ++++IV ++NE V
Sbjct: 576 YLYPDGARVGTSDPEVEAIIAQARAAKGVS--PR--AFTDEEIVRRYLAAMINEGANVVH 631
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP +R
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHR 655
>gi|120596846|ref|YP_961420.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella sp. W3-18-1]
gi|146291124|ref|YP_001181548.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella putrefaciens CN-32]
gi|166971640|sp|A4Y1B6.1|FADB_SHEPC RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|166971642|sp|A1RDW6.1|FADB_SHESW RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|120556939|gb|ABM22866.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Shewanella sp. W3-18-1]
gi|145562814|gb|ABP73749.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Shewanella putrefaciens CN-32]
Length = 716
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 253/514 (49%), Gaps = 20/514 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T + E+A +G VDAVVAP L + A Q D + + W A + L +
Sbjct: 169 TGNDQRAEDALKVGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + V+E G LQ E + F KL +++ K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + VK A+LG G+MG GIA P+++K++ +
Sbjct: 289 LIGIFLNDQLVKGK--AKKAGKLAKEVKNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAALKHSDVVVEAVVEHPKI 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K Q+ A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+E++R
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D ID+
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R KS I +M E+KR G+
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586
Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY+Y + P DP ++ A + DI+ P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKTFEADDIIARTMIPMIIE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI A+ D+ V G+GFPP+R F
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>gi|167844104|ref|ZP_02469612.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei B7210]
Length = 474
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 230/426 (53%), Gaps = 7/426 (1%)
Query: 79 NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVT 138
L P +D V A + GL+ E F + L S LVH FFAQR +K P T
Sbjct: 2 GLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSP-ET 60
Query: 139 DLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRV 198
G APR ++++ ++GGG MG+GIA A + + +PV + E ++ LE G V V
Sbjct: 61 RRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLV 119
Query: 199 KKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCIL 258
KG+MT ++ G YE+ D+VIEA+ E++++K+ +FA+L + C P +L
Sbjct: 120 AKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVL 179
Query: 259 ASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKI 318
A+NTS +D++ + ++G HFFSPA++M LLE+V + S V+ ++ +K+
Sbjct: 180 ATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKL 239
Query: 319 KKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVG 378
K P+ G C GF NR+ Y AA ++E G Y IDRAI +FG PMGP+++ DL G
Sbjct: 240 GKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAG 299
Query: 379 FGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKASPDPEVKK 437
+ AT + R I + E G+ T +G+YLY D R +PDPEV+
Sbjct: 300 GDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEA 359
Query: 438 FIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGM 497
I +AR+ GV+ P+ ++++IV ++NE V E IA++ D+D + G
Sbjct: 360 IIAQARAAKGVS--PR--AFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGY 415
Query: 498 GFPPYR 503
GFP +R
Sbjct: 416 GFPRHR 421
>gi|406036267|ref|ZP_11043631.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 717
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 167/514 (32%), Positives = 261/514 (50%), Gaps = 23/514 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEP--L 59
M + P + + A G VDAVVA ++L A L R W A + +K++P L
Sbjct: 168 MAMANPKRPDAALKDGAVDAVVAADKLQEAAVDLVKQALAGRLDWKAK--RQEKLDPVKL 225
Query: 60 GEAREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
++ F A+ A+ P + +D ++AG L+ EAE F K +
Sbjct: 226 NPLEQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGANLPRNDALKAEAEGFAKAAVT 285
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+L+ +F + K + G P V + A+LG G+MG GIA P+I+
Sbjct: 286 PQAGALIGLFINDQVVKKTSKKYEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIM 343
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ L G+ L +V++ KMT + +T++ + L Y+ FK+VD+VIEA+
Sbjct: 344 KDIGNPQLALGMSEAIKLLTKQVERKKMTPAEMGETLARIRPTLSYDEFKEVDIVIEAVT 403
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K+ + AD EK+ + I+ASNTSTI + + + + VG HFF+P H+MPL+
Sbjct: 404 ENPKVKEIVLADTEKHVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLV 463
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++R +TSP+ I + + +K+ KTPIVV +C GF VNR+ FPY A LL++ G D
Sbjct: 464 EVIRGEKTSPEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLLKDGADFQ 523
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRAG 413
+D+ + KFG PMGP L D+VG + E FP+R I +M E+KR G
Sbjct: 524 QVDKVMEKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDFKGSIQVMYENKRLG 583
Query: 414 ETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+ GFY Y+ RK DP + + + DP ++I++ +
Sbjct: 584 QKNDVGFYKYELDRKGKKVKVVDPTAYELVASVATSEKREFDP-------QEIIDRMMLA 636
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE R + I A++ D+A +MG+GFPP+R
Sbjct: 637 FCNETVRCLEDNIVATASEADMAMIMGVGFPPFR 670
>gi|213969024|ref|ZP_03397164.1| fatty oxidation complex, alpha subunit [Pseudomonas syringae pv.
tomato T1]
gi|301385415|ref|ZP_07233833.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. tomato Max13]
gi|302061389|ref|ZP_07252930.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. tomato K40]
gi|213926323|gb|EEB59878.1| fatty oxidation complex, alpha subunit [Pseudomonas syringae pv.
tomato T1]
Length = 721
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 267/521 (51%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G+VDA+VAP +L + A D R+P K DK+
Sbjct: 170 SGKENSAEDALKVGVVDAIVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAASFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G ++ R VK+ A+LG G+MG GIA + P
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + + + E
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEAN 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY+Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 INWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|311109839|ref|YP_003982690.1| fatty acid oxidation complex subunit alpha 3 [Achromobacter
xylosoxidans A8]
gi|310764528|gb|ADP19975.1| fatty acid oxidation complex subunit alpha 3 [Achromobacter
xylosoxidans A8]
Length = 669
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/404 (34%), Positives = 227/404 (56%), Gaps = 8/404 (1%)
Query: 101 GLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGS 160
GLQ E FQ+L + L H FFA+R + KVP + G+APR V+ VA++G G MG+
Sbjct: 230 GLQAERRYFQELRLTPDAFGLRHQFFAERESLKVPALA--GVAPRPVQTVAVIGAGTMGT 287
Query: 161 GIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLD 220
GIA + + + VIL E +E L+ G R++A+ RV GK Q + +++++ L+ +D
Sbjct: 288 GIAISALQAKLDVILLERDEAALQRGHERIQAHYAQRVAAGKTDQAQADQSLARLSATVD 347
Query: 221 YESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRI 280
+ D+VIEA+ E + +KQ++F ++++ P +LA+NTS +D++ I + T +
Sbjct: 348 WTQVARADLVIEAVFEQLEVKQEVFRIIDRHARPGAVLATNTSYLDVDKIAQATSRPQDV 407
Query: 281 VGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPY 340
+G HFFSPA+VM LLE+VR ++P V+ + +GK++ K+P++ GN GF NR++ Y
Sbjct: 408 LGLHFFSPANVMKLLEVVRGAHSAPDVLATGMALGKRLGKSPVLCGNAFGFVGNRIYNVY 467
Query: 341 TQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS 400
Q L++E G +D+A+ +FG MGPF + DL G + A R
Sbjct: 468 RQQCELMLEDGAWPETVDQALEQFGFAMGPFSVGDLAGLDIPWAMRKSQAATRDSRVRYV 527
Query: 401 MIIPIMQEDKRAGETTRKGFYLY--DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLS 458
I+ + E R G T G+Y + D+ + D V+ IE A G+ + +L
Sbjct: 528 DILDKLCELGRYGRKTGAGYYQHTGDKTAGRTSDAAVRAIIEDASRRRGI----ERRELG 583
Query: 459 EKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++I +VNEA V EGIA +A+D+D+ V+G GFP +
Sbjct: 584 AEEIQRRAMLALVNEAAWVMHEGIATRASDIDVVLVLGYGFPRW 627
>gi|302129979|ref|ZP_07255969.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. tomato NCPPB 1108]
Length = 721
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 267/521 (51%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G+VDA+VAP +L + A D R+P K DK+
Sbjct: 170 SGKENSAEDALKVGVVDAIVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAASFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G ++ R VK+ A+LG G+MG GIA + P
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + + + E
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEAN 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY+Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 INWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|163761199|ref|ZP_02168275.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Hoeflea phototrophica DFL-43]
gi|162281538|gb|EDQ31833.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Hoeflea phototrophica DFL-43]
Length = 694
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 256/505 (50%), Gaps = 18/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRP--WVATLYKTDKIEP 58
MM V +EA +GLVD V A +A ++LE P V TL +
Sbjct: 151 MMPAGGSVTADEALEIGLVDRV-AEGDAREAGLAYARELLESGAPVRAVGTLPRPADDAA 209
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+A +K++ P+ ID +EA G+++E F +L+ +
Sbjct: 210 AFDAARALW------QKKSRGEVAPLRAIDAIEAATKMDLDEGVREERRIFLELMETPQR 263
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
L+H FF R +K+P + G+APR + V ++GGG MG+GIATA +LS V L E
Sbjct: 264 AGLIHAFFNDRKVAKLPEIE--GIAPRNMAHVGVIGGGTMGAGIATACLLSGLSVTLIER 321
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ + G + ANL + VK+GK+ ++ + T+S L+ V DY D D+ IEA+ E++
Sbjct: 322 DAAAADKARGTITANLDAAVKRGKLPADRRDATLSQLSTVTDYAELSDCDLAIEAVFEDM 381
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
++K ++FA L+ P ILA+NTS +D+N I T ++G HFFSPAHVM LLE+V
Sbjct: 382 AVKHEVFARLDAVMKPGAILATNTSYLDVNEIAAATRRPSDVIGLHFFSPAHVMKLLEVV 441
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
+ T+ V + K++ K + G C GF NRM Y AA ++ G + ID
Sbjct: 442 VADATAADVTATAFALAKRLGKIAVRAGVCDGFIGNRMLATYRGAADRMILDGASPWEID 501
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
AI FG+PMGPF ++DL G + T + R M + G+ T +
Sbjct: 502 AAIKAFGLPMGPFEMSDLAGLDIGFMTRKRKAATRDPRDVVPTWADAMYHEGWLGQKTGQ 561
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
G+Y++ E RKA+P+ VK IE AR D + ++I + +VNEA +V
Sbjct: 562 GYYVH-EGRKATPNEAVKPLIEAARG------DRPQRTFTPEEIQRVYMAAMVNEAAKVL 614
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
E IA + D+D+ + G GFP +R
Sbjct: 615 GEEIARRPLDVDVTLLYGYGFPRWR 639
>gi|404401650|ref|ZP_10993234.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas fuscovaginae UPB0736]
Length = 715
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 265/524 (50%), Gaps = 49/524 (9%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEH-----------RRPWVATLYK 52
K + E+A +G VDAVVAP QL +Q ALD+++ R+P K
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPEQL----QQAALDLVKRAISGEIDYKAKRQP------K 219
Query: 53 TDKIEPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDF 109
DK++ L ++ F A+ A + PN P+ I ++ G L+ EA F
Sbjct: 220 LDKLK-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGF 278
Query: 110 QKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILS 169
KL ++ +SL+ +F + K D + VK+ A+LG G+MG GIA
Sbjct: 279 VKLAKTSAAQSLIGLFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASK 336
Query: 170 NYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDM 229
P+++K++NE +E G+ L RV KG+MT K + ++ + L Y F VD+
Sbjct: 337 GTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDL 396
Query: 230 VIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPA 289
V+EA++EN +KQ + A++E +LASNTSTI ++L+ + + VG HFF+P
Sbjct: 397 VVEAVVENPKVKQAVLAEVEGQVKEDAVLASNTSTISISLLAKALKRPENFVGMHFFNPV 456
Query: 290 HVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVE 349
H+MPL+E++R ++S Q + + KK+ K PIVV +C GF VNR+ FPY LV
Sbjct: 457 HMMPLVEVIRGEKSSEQAVATTVAYAKKMGKNPIVVNDCPGFLVNRILFPYFGGFAKLVS 516
Query: 350 RGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQ 407
G D ID+ + KFG PMGP L D+VG E FP+R + + +
Sbjct: 517 AGVDFVRIDKIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALY 576
Query: 408 EDKRAGETTRKGFYLYDE----RRKASPDPEV----KKFIEKARSMSGVAIDPKFAKLSE 459
E KR G+ KGFY Y+ ++K DP V K I + R ++++
Sbjct: 577 EAKRLGQKNGKGFYAYETDKRGKQKKVADPSVLEVLKPIIYEQR------------EVTD 624
Query: 460 KDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+DI+ + P+ E R +GI AA+ D+ V G+GFPP+R
Sbjct: 625 EDIINWMMIPLCLETVRCLEDGIVDTAAEADMGLVYGIGFPPFR 668
>gi|422653054|ref|ZP_16715828.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. actinidiae str. M302091]
gi|330966111|gb|EGH66371.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 721
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 270/525 (51%), Gaps = 51/525 (9%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEH-----------RRPWVATLYK 52
+ K E+A +G+VDAVVAP +L + A LD+++ R+P K
Sbjct: 170 SGKENSAEDALKVGVVDAVVAPEKLQAAA----LDLIQRSISGEFDYKAKRQP------K 219
Query: 53 TDKIEPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDF 109
DK++ L ++ F A+ A + PN P+ I ++ G L+ EA F
Sbjct: 220 LDKLK-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGF 278
Query: 110 QKLLRSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL 168
K+ ++ +SL+ +F Q K G ++ R VK+ A+LG G+MG GIA +
Sbjct: 279 VKMAKTSAAQSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAV 335
Query: 169 SNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVD 228
P+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD
Sbjct: 336 KGTPILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVD 395
Query: 229 MVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSP 288
+V+EA++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P
Sbjct: 396 LVVEAVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNP 455
Query: 289 AHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLV 348
H+MPL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV
Sbjct: 456 VHMMPLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLV 515
Query: 349 ERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIM 406
G D ID+ + KFG PMGP L D+VG E FP+R + I +
Sbjct: 516 SAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDAL 575
Query: 407 QEDKRAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLS 458
E R G+ KGFY Y+ +K P DP V K + + R ++S
Sbjct: 576 YEANRLGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVS 623
Query: 459 EKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++DI+ + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 624 DEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|409431188|ref|ZP_11262572.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. HYS]
Length = 715
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 258/509 (50%), Gaps = 19/509 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVV P L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVTPELLQAAALDLIKRAISGELDHKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D R VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE ++ G+ L RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DINESAIQLGLNEASKLLGKRVEKGRLTPAKMAEALNAIRPTLSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I ++ E KR G+
Sbjct: 524 IDKIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY Y+ ++ P KK + A I + ++S++DI+ + P+ E
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVADAAVLDVLKPIVYEQREVSDEDIINWMMIPLCLET 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AA+ D+ V G+GFPP+R
Sbjct: 640 VRCLEDGIVDTAAEADMGLVYGIGFPPFR 668
>gi|410970845|ref|XP_003991887.1| PREDICTED: peroxisomal bifunctional enzyme [Felis catus]
Length = 723
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 165/519 (31%), Positives = 266/519 (51%), Gaps = 31/519 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D +V + + + A++ + LE RR I+
Sbjct: 151 LITSGRHILADEALKLGILDEMVNSDPVEEAIKLAQRISGQSLESRR------LCNKPIQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L EIF A + RKQ P C+ V+A V G++KE E F L +S
Sbjct: 205 SLPNMDEIFSEALLKMRKQHPGCLSQETCVRAVQAAVQYPYEVGIKKEEELFMYLQKSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + FFA+R +K G + + + + V ++G G MG GI + + PVI
Sbjct: 265 AQALQYAFFAERKANKWSAPSGASCKTASAQPISSVGVVGLGTMGRGIVISFAKAKIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
E+++K LE G + + L+ K + + + LT + + VD+VIEA+
Sbjct: 325 AVELDKKQLETADGIITSVLEKEASKMQHSSHHWSGPKPRLTTSM--KELGGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E ++LK+Q+FA+L C P L +NTST+D++ I T ++G HFFSPAH+M L
Sbjct: 383 FEEINLKKQVFAELSAVCKPETFLCTNTSTLDIDEIASSTDRPHLVIGTHFFSPAHIMRL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LEI+ + +S I ++++ KKIKK +VVGNC GF NRM Y ++ L+E G+
Sbjct: 443 LEIIPSQYSSLTTIATVMNLSKKIKKIGVVVGNCKGFVGNRMLKHYYNQSYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
ID+ + +FG +GPFR++DL G V TG P R + IP
Sbjct: 503 EEIDQVLEEFGFKIGPFRVSDLSGLDVGWKCRQGEGLTGPTLPPGTPARKRGNERYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + +F+ + R I+P+ +S +
Sbjct: 563 DMLYELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSEFLSQYRET--YHIEPRI--ISRDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFP 500
I+E + ++NEA R+ EGIA +D+ + G G+P
Sbjct: 619 ILERCLYSLINEAFRILGEGIAATPEHIDVVYLYGYGWP 657
>gi|422589790|ref|ZP_16664450.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. morsprunorum str. M302280]
gi|330876682|gb|EGH10831.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. morsprunorum str. M302280]
Length = 721
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 266/521 (51%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G+VDAVVAP +L + A D R+P K DK+
Sbjct: 170 SGKENSAEDALKVGVVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G ++ R VK+ A+LG G+MG GIA + P
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + I + E
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAN 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 INWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|257484703|ref|ZP_05638744.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|422681888|ref|ZP_16740156.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|331011230|gb|EGH91286.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 721
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 264/520 (50%), Gaps = 41/520 (7%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP +L + A D R+P K DK+
Sbjct: 170 SGKESSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
++ +SL+ +F + K D + VK+ A+LG G+MG GIA + P+
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDA--VAKDVKQAAVLGAGIMGGGIAYQSAVKGTPI 340
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+EA
Sbjct: 341 LMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEA 400
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
++EN +KQ + A++E H LASNTSTI ++L+ + + VG HFF+P H+MP
Sbjct: 401 VVENPKVKQAVLAEVEASVGEHTFLASNTSTISISLLAKALKRPENFVGMHFFNPVHMMP 460
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R ++S + + + +K+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 461 LVEVIRGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVD 520
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKR 411
ID+ + KFG PMGP L D+VG E FP+R + ++ + E KR
Sbjct: 521 FVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKR 580
Query: 412 AGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDIV 463
G+ KGFY Y+ +K P DP V K + + R ++S++DI+
Sbjct: 581 LGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDII 628
Query: 464 EMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 629 NWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|152998571|ref|YP_001364252.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella baltica OS185]
gi|166971638|sp|A6WHA0.1|FADB_SHEB8 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|151363189|gb|ABS06189.1| fatty oxidation complex, alpha subunit FadB [Shewanella baltica
OS185]
Length = 716
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 168/514 (32%), Positives = 253/514 (49%), Gaps = 20/514 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K + E+A +G VD+VVAP L + A Q D + + W A + L +
Sbjct: 169 TGKDQRAEDALKVGAVDSVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + V+E G LQ E + F KL +++ K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + V A+LG G+MG GIA P+++K++ +
Sbjct: 289 LIGIFLNDQFVKGK--AKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKI 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K Q+ A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+E++R
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D ID+
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R KS I +M E+KR G+
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586
Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY+Y + P DP ++ A + DI+ P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKAFEADDIIARTMIPMIIE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI A+ D+ V G+GFPP+R F
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>gi|422605224|ref|ZP_16677238.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. mori str. 301020]
gi|330888880|gb|EGH21541.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. mori str. 301020]
Length = 721
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 264/520 (50%), Gaps = 41/520 (7%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP +L + A D R+P K DK+
Sbjct: 170 SGKESSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
++ +S + +F + K D + VK+ A+LG G+MG GIA + P+
Sbjct: 283 KTSAAQSFIGLFLNDQELKKKAKGYDA--VAKDVKQAAVLGAGIMGGGIAYQSAVKGTPI 340
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+EA
Sbjct: 341 LMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEA 400
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
++EN +KQ + A++E H ILASNTSTI ++L+ + + VG HFF+P H+MP
Sbjct: 401 VVENPKVKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMP 460
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R ++S + + + +K+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 461 LVEVIRGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVD 520
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKR 411
ID+ + KFG PMGP L D+VG E FP+R + ++ + E KR
Sbjct: 521 FVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKR 580
Query: 412 AGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDIV 463
G+ KGFY Y+ +K P DP V K + + R ++S++DI+
Sbjct: 581 LGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDII 628
Query: 464 EMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 629 NWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|89901371|ref|YP_523842.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
gi|89346108|gb|ABD70311.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Rhodoferax ferrireducens T118]
Length = 706
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 163/507 (32%), Positives = 268/507 (52%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + + EEAH+LGLVD + N +++ + ++L P + +T + L
Sbjct: 157 LMLSGRHMGAEEAHALGLVDRLGHSNDILADGLAYTQELLATHAP----VRRTRDAQALS 212
Query: 61 E---AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ R + RA+ K++ L P+ ++ VEA + GL+ E E F + L S
Sbjct: 213 DRQANRASIEAVRAETGKKSRGLFSPLKIVEAVEAALDKSFDEGLRIERELFLQCLDSAQ 272
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L+H FFA+R K P + PR + V ++GGG MG+GIA A++ + V + E
Sbjct: 273 RAGLIHAFFAEREVLKAPETRNT--KPRAIAHVGVVGGGTMGAGIAVAVLDAGLSVTMIE 330
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+E L G + + KG+MT + ++ G Y++ D+VIEA+ E+
Sbjct: 331 RDEAALARGHAHIEKVYNGLIAKGRMTTDAKAANLARFVGSTSYDALAPADIVIEAVFED 390
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++KQ +FA+L++ C P +LA+NTS +D+++I +VG HFFSPA++M LLEI
Sbjct: 391 MAVKQAVFAELDRVCKPGAVLATNTSYLDIDVIAASISRPADVVGLHFFSPANIMKLLEI 450
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + S V+ ++ KK+ K P+ G C GF NR+ Y AA ++E G Y I
Sbjct: 451 VVPAKVSADVVATAFELAKKLHKVPVRAGVCDGFIGNRILAAYRMAADYMMEDGASPYQI 510
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ FG PMGPF+++DL G + AT + R I + E G+ T
Sbjct: 511 DQAVRDFGYPMGPFQVSDLAGGDIGWATRKRKAATRDPRARYVQIADRICERGWFGQKTG 570
Query: 418 KGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+G+YLY E R +PDPE++ I+ R+ +G I P+ + ++I+ ++NE
Sbjct: 571 RGYYLYPEGARTGTPDPEIEAIIDAERARAG--ITPR--SFTNEEIMRRYMAAMINEGAN 626
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V + IA++ D+D+ + G GFP +R
Sbjct: 627 VVHQRIALRPLDVDVTFLYGYGFPRHR 653
>gi|373951667|ref|ZP_09611628.1| Fatty acid oxidation complex subunit alpha [Shewanella baltica
OS183]
gi|386322515|ref|YP_006018632.1| Fatty acid oxidation complex subunit alpha [Shewanella baltica
BA175]
gi|333816660|gb|AEG09326.1| Fatty acid oxidation complex subunit alpha [Shewanella baltica
BA175]
gi|373888267|gb|EHQ17159.1| Fatty acid oxidation complex subunit alpha [Shewanella baltica
OS183]
Length = 716
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 168/514 (32%), Positives = 252/514 (49%), Gaps = 20/514 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K + E+A +G VDAVV P L + A Q D + + W A + L +
Sbjct: 169 TGKDQRAEDALKVGAVDAVVTPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + V+E G LQ E + F KL +++ K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + V A+LG G+MG GIA P+++K++ +
Sbjct: 289 LIGIFLNDQFVKGK--AKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKI 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K Q+ A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+E++R
Sbjct: 407 KAQVLAEVEGYVSDDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D ID+
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R KS I +M E+KR G+
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586
Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY+Y + P DP ++ A + DI+ P++ E
Sbjct: 587 KGFYIYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKAFEADDIIARTMIPMIIE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI A+ D+ V G+GFPP+R F
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>gi|326925661|ref|XP_003209029.1| PREDICTED: peroxisomal bifunctional enzyme-like [Meleagris
gallopavo]
Length = 726
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 270/527 (51%), Gaps = 38/527 (7%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
++ T + + EA LGLVD VV N + + A + L HRR + + K +E
Sbjct: 151 IITTGRHISASEALKLGLVDEVVEENTVEAAIRLANRLIGQPLGHRRLSLKPVPKLPNME 210
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
A + +K+A P +C ++A G++KE E F LL S
Sbjct: 211 AF------LTEALVKVKKRAQGCLAPELCFQAIKAATEQPFADGVRKERELFNILLTSGQ 264
Query: 118 CKSLVHIFFAQRGTSKV---PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
K+L + FFA+R K G + +P+ ++K A++G G MG GI T+L+ + PV+
Sbjct: 265 AKALQYAFFAERAVEKWTTPSGASWKTASPQPIRKAAVIGLGTMGRGIVTSLVKAKIPVV 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISL-----LTGVLDYESFKDVDM 229
E + ++L G R + +++ M E+ +T+ L +D++ +DVD+
Sbjct: 325 ALEQDLEYLNTG----RKAVMLLLEREAMKMEQGGQTLDFNNPARLQFAVDFDVLRDVDL 380
Query: 230 VIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPA 289
VIEA+ EN++LK++IF L + C P L +NTS ++++ I T +++G HFFSPA
Sbjct: 381 VIEAVFENMALKKEIFNKLSRICKPEAFLCTNTSALNIDEIASVTSRPQQVIGTHFFSPA 440
Query: 290 HVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVE 349
HVM LLEI+ TSP I + + K +KK +VVGNC GF NRM FPY Q A L+E
Sbjct: 441 HVMRLLEIIYGRHTSPTTIATAMQLAKVMKKVGVVVGNCFGFVGNRMMFPYVQQAVFLLE 500
Query: 350 RGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAI-------ATGMQFIENFPERT---YK 399
G+ +D+ + FG +GPFR++DL G V TG R Y+
Sbjct: 501 EGSRPEDVDQVLEDFGFKIGPFRMSDLAGLDVGWRSRKDQGLTGPTLAPGTSARQRHGYR 560
Query: 400 SMIIP-IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAK 456
+P ++ E R G+ T KG+Y Y++ R A PDP + F+ + R I +F
Sbjct: 561 YSPLPDLLCEKGRFGQKTGKGWYQYEKAGGRTAKPDPWIHSFLSEYRDTH--QIKTRF-- 616
Query: 457 LSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ +++I+E F ++NE + AEGIA LD+ + G G+P +R
Sbjct: 617 IDQEEILERCLFTLINEGFDILAEGIASGPEHLDVVYINGYGWPKHR 663
>gi|302186668|ref|ZP_07263341.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. syringae 642]
Length = 721
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 270/525 (51%), Gaps = 51/525 (9%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEH-----------RRPWVATLYK 52
+ K E+A +G VDAVVAP++L S A LD+++ R+P K
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPDKLQSAA----LDLIQRAISGEFDYKAKRQP------K 219
Query: 53 TDKIEPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDF 109
DK++ L ++ F A+ A + PN P+ I ++ G L+ EA F
Sbjct: 220 LDKLK-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGF 278
Query: 110 QKLLRSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL 168
K+ ++ +SL+ +F Q K G + + VK+ A+LG G+MG GIA +
Sbjct: 279 VKMAKTSAAQSLIGLFLNDQELKKKAKGYDRIA---KDVKQAAVLGAGIMGGGIAYQSAV 335
Query: 169 SNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVD 228
P+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD
Sbjct: 336 KGTPILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVD 395
Query: 229 MVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSP 288
+V+EA++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P
Sbjct: 396 LVVEAVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNP 455
Query: 289 AHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLV 348
H+MPL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV
Sbjct: 456 VHMMPLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLV 515
Query: 349 ERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIM 406
G D ID+ + KFG PMGP L D+VG E FP+R + I +
Sbjct: 516 SAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDAL 575
Query: 407 QEDKRAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLS 458
+ KR G+ KGFY Y+ +K P DP V K + + R ++S
Sbjct: 576 YDAKRLGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVS 623
Query: 459 EKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++DIV + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 624 DEDIVNWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|395839843|ref|XP_003792785.1| PREDICTED: peroxisomal bifunctional enzyme [Otolemur garnettii]
Length = 723
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 274/548 (50%), Gaps = 33/548 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTAR--QWALD-ILEHRRPWVATLY-KTDKI 56
++++ + + EA LGL+D VV + + + Q LD LE RR LY K +I
Sbjct: 151 LIVSGRFILAGEALKLGLLDKVVNSDPVEEAIKFVQTVLDQPLESRR-----LYNKPIQI 205
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P + IF A Q +K+ P P C+ V+A V G++KE E F L +S
Sbjct: 206 VPYMDT--IFSEAFLQVQKKYPGQLAPEACVRAVQAAVQYPYEEGIKKEQELFMYLQQSG 263
Query: 117 TCKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
++L + FFA+R K G + + R + V ++G G MG GI + + PV
Sbjct: 264 QARALQYAFFAEREACKWSTPSGASWTTASARPISSVGVVGLGTMGRGIVISFAKAKIPV 323
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
I E ++ LE + + L+ K + + + LT + + VD+V+EA
Sbjct: 324 IAVESDKNQLETANKIITSTLEKEASKMQQSGYSWSGPKPRLTTSM--KELGGVDLVVEA 381
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
+ E ++LK+++FA+L C P L +NTS +D++ I T ++G HFFSPAHVM
Sbjct: 382 VFEEMNLKKRVFAELSAVCKPEAFLCTNTSALDIDEIASSTNRPHLVIGTHFFSPAHVMK 441
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
LLE++ + +SP I ++++ KKI+K +VVGNC GF NRM PY + L+E G+
Sbjct: 442 LLEVIPSRYSSPTTIATVMELSKKIQKFGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSK 501
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMII 403
ID+ + +FG MGPFR++DL G V TG P R + I
Sbjct: 502 PEEIDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPMLPPGTPARKRGNRRYCPI 561
Query: 404 P-IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEK 460
P ++ E R G+ T KG+Y YD+ R PDP + KF+ + R I+P+ +S
Sbjct: 562 PDMLCELGRFGQKTGKGWYQYDKPLGRICEPDPWIYKFLSQYRET--YHIEPRI--ISRD 617
Query: 461 DIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFK 520
+I+E + ++NEA R+ EGIA +D+ + G G+P +R + + +
Sbjct: 618 EILERCLYSLINEAFRILGEGIAASPEHIDVIYLHGYGWPRHRGGPMFYASTVGLPTILE 677
Query: 521 NLLCYFDQ 528
L Y+ Q
Sbjct: 678 KLQKYYRQ 685
>gi|419959285|ref|ZP_14475340.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae GS1]
gi|388605796|gb|EIM35011.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae GS1]
Length = 715
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 175/513 (34%), Positives = 258/513 (50%), Gaps = 32/513 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
M+LT K ++ +A GLVD VV L+ A + AL + +RP L ++I P
Sbjct: 167 MILTGKQLRARQALKAGLVDEVVPHAILLEAAVERALKGRQAKRP----LPVRERILAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
LG + +K N + V+E G+ G +G EA+ F +L +
Sbjct: 223 LGRTLLFNIVGKKTEQKTKGNYPAATRILKVIETGLSQGSSSGYAAEAKAFGELAMTPQS 282
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
++L IFFA K PG ++ AP R V G G TA I PV +K++
Sbjct: 283 QALRGIFFASTEVKKDPG-SEAEPAPLRAVGVLGGGLMGGGIAFVTA-IKGKLPVRIKDI 340
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N K + + NL +VK+ + + +KT++++TG DY F D+VIEA+ E++
Sbjct: 341 NPKGINHALQYSWQNLDRKVKRRHIKASERDKTLAMITGATDYSGFAHRDLVIEAVFEDL 400
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+LKQQ+ AD+E++C PH I ASNTS++ + I + ++++G H+FSP MPL+E++
Sbjct: 401 ALKQQMVADVEQHCAPHTIFASNTSSLPIGDIAAKAVRPEQVIGLHYFSPVEKMPLVEVI 460
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
TSPQ I ++ + KK KTPIVV + GF VNR+ PY A L+ G + +D
Sbjct: 461 PHATTSPQTIATVVKLAKKQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVD 520
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIP------IMQEDKRA 412
A+ KFG P+GP +L D VG I TG + I E Y P + +D R
Sbjct: 521 DALVKFGFPVGPIQLLDEVG----IDTGTKIIPVL-EAAYGDRFAPPANFVSAILKDDRK 575
Query: 413 GETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
G +GFYLY + + S DP V I ++G AKLS E
Sbjct: 576 GRKNERGFYLYAAKGRKSKKQVDPSVYALI----PVTGQ------AKLSAVQCAERCVMM 625
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E + A D DI +V G+GFPP+
Sbjct: 626 MLNEAARCFGEQVIKSARDGDIGAVFGIGFPPF 658
>gi|422646817|ref|ZP_16709949.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. maculicola str. ES4326]
gi|330960363|gb|EGH60623.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 721
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 264/521 (50%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G+VDAVVAP +L + A D R+P K DK+
Sbjct: 170 SGKENAAEDALKVGVVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ SL+ +F Q K G ++ R VK+ A+LG G+MG GIA + P
Sbjct: 283 KTSAAHSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGTVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + I + E
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAN 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYAYETDKKGKPKKVNDPAVLEVLKPIVHEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
V + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 VNWMMIPLCLETVRCLEDGIVDTAAEADMGLIYGIGFPPFR 668
>gi|389684613|ref|ZP_10175941.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Pseudomonas chlororaphis O6]
gi|388551836|gb|EIM15101.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Pseudomonas chlororaphis O6]
Length = 703
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 161/506 (31%), Positives = 265/506 (52%), Gaps = 15/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAP-NQLVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
++L+ + + E A LG++D + + QL+ A +A +++E P E L
Sbjct: 154 LILSGEQIDAERARMLGILDRIASSAEQLLDEACAYANELIECGAPARPAEAWPKPAEDL 213
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+ + RA+ + + P + + +EA + GL +E F++ S K
Sbjct: 214 PD--DFLARYRAEHEPRWKSRLAPRLVLSALEAACLLPLEEGLARELALFKQAEASRQSK 271
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+L H+FFA+R +VPG+ + PR++ KVA++G G +G+GIA + PV L E
Sbjct: 272 ALRHVFFAERKAGRVPGIGS-DITPRKLDKVAVIGAGPLGAGIAMSFADVGIPVALLEPE 330
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
L+ G+ ++R Q+ VK GKM+ + ++ + LL G LDYE D D+VIEA+ E
Sbjct: 331 GGALDRGLMQIRKLYQASVKHGKMSAAQLQQRMDLLFGTLDYEDLADADLVIEALYEKPG 390
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+Q+F LE+ C P ILA++TS++D++ I ++G HFFSPA+VM L+E+VR
Sbjct: 391 VKRQVFLSLEQVCKPGAILATSTSSLDIDAIAASLGRPQDVIGLHFFSPANVMRLVEVVR 450
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
T+P+V+ + I K+I K P++ G G RM PY + A LV G +D
Sbjct: 451 GKATAPEVLASAMQIAKRIGKLPVISGAGQGAIGERMLEPYAREAHRLVLEGATPAQVDS 510
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQE---DKRAGETT 416
+T + MG F + DL G V+ T N + I QE R G+ T
Sbjct: 511 VLTGLDLNMGVFSMLDLAGIDVSFLT---RDANRAATAHDQSYCCIAQELCALGRYGQKT 567
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+GFYLY+ + + D EV E+ ++G P+ A + + +I + F ++NE +
Sbjct: 568 GRGFYLYEGQNR-QEDYEVTALAEQ---LAGELDVPRRA-IEDLEIHDRCLFMLINEGIQ 622
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPY 502
+ EGIA++A+D+D+ + G GFP +
Sbjct: 623 LLDEGIALRASDIDLVWINGYGFPAH 648
>gi|293605889|ref|ZP_06688259.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Achromobacter piechaudii ATCC 43553]
gi|292815676|gb|EFF74787.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Achromobacter piechaudii ATCC 43553]
Length = 707
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 153/426 (35%), Positives = 237/426 (55%), Gaps = 7/426 (1%)
Query: 79 NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVT 138
L P ++ V A + GL+ E F + L S LVH FFA+R T+KVP +
Sbjct: 235 GLYSPAKIVEAVRAAIEQPFDEGLRTERALFLQCLNSPQRAGLVHAFFAERETAKVPELK 294
Query: 139 DLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRV 198
+ PRR+ KV ++GGG MG+GIA A++ + PV++ E +E LE G RV V
Sbjct: 295 EA--KPRRLDKVGVVGGGTMGAGIAVAMLDAGLPVVMIEQDEPALERGRARVAQVYDRLV 352
Query: 199 KKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCIL 258
K G+++ + + ++ LTG Y++ D D+++EA+ E++ +K +FA L++ P +L
Sbjct: 353 KNGRLSAQDRDARLARLTGATSYDALDDADLIVEAVFEDMDVKLGVFAQLDRVAKPGAVL 412
Query: 259 ASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKI 318
A+NTS +D+N I T ++G HFFSPA++M LLEIV T+ + ++ +++
Sbjct: 413 ATNTSYLDVNRIASATRGPADVLGLHFFSPANIMKLLEIVVGEHTAADTVATGFELARRL 472
Query: 319 KKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVG 378
+KTP+ G C GF NR+ Y QAA +++E G Y ID A +FG PMGP+++ DL G
Sbjct: 473 RKTPVRAGVCDGFIGNRILAAYRQAADMMMEDGASPYDIDAAAREFGYPMGPYQMVDLAG 532
Query: 379 FGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKASPDPEVKK 437
+ AT + I + E G+ T +GFYLY D R +PDPEV
Sbjct: 533 GDIGWATRKRRAATRDPALRTVQIPDRLCERGWFGQKTGRGFYLYPDGARVGTPDPEVLA 592
Query: 438 FIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGM 497
I++ R +G I P+ + +DI+ ++NEA V EGIA++ +D+D+ + G
Sbjct: 593 IIDEERRRAG--ITPR--AFTHEDILRRYLAAMINEAANVLHEGIALRPSDVDVVFLSGY 648
Query: 498 GFPPYR 503
GFP YR
Sbjct: 649 GFPRYR 654
>gi|426343176|ref|XP_004038193.1| PREDICTED: peroxisomal bifunctional enzyme-like, partial [Gorilla
gorilla gorilla]
Length = 535
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 155/464 (33%), Positives = 240/464 (51%), Gaps = 22/464 (4%)
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
I+ L IF A + R+Q P C+ V+A V G++KE E F LL+S
Sbjct: 15 IQSLPNMDSIFSEALLKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQS 74
Query: 116 ETCKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++L + FFA+R +K G + + R V V ++G G MG GI + + P
Sbjct: 75 GQARALQYAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIP 134
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
VI + ++ L + + L+ K + + + LT + + VD+VIE
Sbjct: 135 VIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIE 192
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A+ E +SLK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM
Sbjct: 193 AVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDIDEIASSTDRPHLVIGTHFFSPAHVM 252
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
LLE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY A+ L+E G+
Sbjct: 253 KLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGS 312
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMI 402
+D+ + +FG MGPFR++DL G V TG P R +
Sbjct: 313 KPEEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRYCP 372
Query: 403 IP-IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSE 459
IP ++ E R G+ T KG+Y YD+ R PDP + KF+ + R I+P+ +S+
Sbjct: 373 IPDVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETH--HIEPR--TISQ 428
Query: 460 KDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+I+E + ++NEA R+ EGIA +D+ + G G+P ++
Sbjct: 429 DEILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHK 472
>gi|386311805|ref|YP_006007970.1| fatty acid oxidation complex subunit FadB [Shewanella putrefaciens
200]
gi|319424430|gb|ADV52504.1| fatty oxidation complex, alpha subunit FadB [Shewanella
putrefaciens 200]
Length = 716
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/514 (32%), Positives = 251/514 (48%), Gaps = 20/514 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T + E+A +G VDAVVAP L + A Q D + + W + L +
Sbjct: 169 TGNDQRAEDALKVGAVDAVVAPEALETAAIQMLKDAVAEKLDWQTRRNRKLSALTLPKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + V+E G LQ E + F KL +++ K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + VK A+LG G+MG GIA P+++K++ +
Sbjct: 289 LIGIFLNDQLVKGK--AKKAGKLAKEVKNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAALKHSDVVVEAVVEHPKI 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K Q+ A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+E++R
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D ID+
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R KS I +M E+KR G+
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586
Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY+Y + P DP ++ A DI+ P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------DLKAFEADDIIARTMIPMIIE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI A+ D+ V G+GFPP+R F
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>gi|392980099|ref|YP_006478687.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. dissolvens SDM]
gi|392326032|gb|AFM60985.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. dissolvens SDM]
Length = 715
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 262/507 (51%), Gaps = 20/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LT K ++ +A GLVD VV + L+ A + AL + +R V + + PLG
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPHSILLEAAVELALKGRQAKR--VLPVRERILAGPLG 224
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ +K N ++V+E G+ G +G EA+ F +L + ++
Sbjct: 225 RTLLFSMVGKKTEQKTKGNYPAAKRILEVIETGLSQGSSSGYAAEAKAFGELAMTPQSQA 284
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L IFFA K PG +D AP V G G TA + PV +K++N
Sbjct: 285 LRSIFFASTDVKKDPG-SDAEPAPLNAVGVLGGGLMGGGIAFVTA-SKAKLPVRIKDINP 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
K + + NL +VK+ + + +KT+++++G DY F D+VIEA+ E+++L
Sbjct: 343 KGINHALQYSWQNLDQKVKRRHIKASERDKTVAMISGTTDYRGFAHRDLVIEAVFEDLAL 402
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQ+ AD+E++C PH I ASNTS++ + I + ++++G HFFSP MPL+E++
Sbjct: 403 KQQMVADVEQHCAPHTIFASNTSSLPIGDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPH 462
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TSPQ + ++ + KK KTPIVV + GF VNR+ PY A L+ G + +D A
Sbjct: 463 ASTSPQTVSTVVKLAKKQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEKIEHVDEA 522
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRAGET 415
+ KFG P+GP +L D VG I TG + I + ER + + I+ + +D R G
Sbjct: 523 LVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSPPANIVSAILKDDRKGRK 578
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
+GFYLY + + S KK ++ S+ G+ AKLS E ++NEA
Sbjct: 579 NERGFYLYGAKGRKS-----KKQVDP--SVYGLIPTTGQAKLSAVQCAERCVMMMLNEAA 631
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
R F E + A D DI +V G+GFPP+
Sbjct: 632 RCFGEQVIKSARDGDIGAVFGIGFPPF 658
>gi|359783415|ref|ZP_09286629.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas psychrotolerans L19]
gi|359368632|gb|EHK69209.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas psychrotolerans L19]
Length = 715
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 262/504 (51%), Gaps = 27/504 (5%)
Query: 13 AHSLGLVDAVVAPNQLVSTA----RQWA---LDILEHRRPWVATLYKTDKIEPLGEAREI 65
A +G+ DAVVAP L A R+ A LD R+P + L + + IE +
Sbjct: 179 ALKVGVADAVVAPEHLFDAALDLVRRAAVGELDYRAKRKPKLEKL-QLNAIEAMMAFESA 237
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
F +QA P+ P+ I ++ G L+ E F K+ ++ SLV +F
Sbjct: 238 KGFVASQA---GPHYPAPLEAIKAIQKSANYGRDKALEVEGAGFAKMAQTSVSASLVGLF 294
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
+ + V + AP VK ++LG G+MG GIA L P+++K++ ++ LE
Sbjct: 295 LNDQALKRKAKVLEKQAAP--VKLTSVLGAGIMGGGIAYQSALKGTPILMKDIRDEALEL 352
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
G+ L RV+KG++ K + ++ + L Y FK VD+V+EA++EN +KQ +
Sbjct: 353 GLSEASKLLNKRVEKGRLEPAKMAEALNRIRPTLSYGDFKSVDLVVEAVVENPKVKQAVL 412
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
A++E IL SNTSTI ++L+ + + G HFF+P H+MPL+E++R +TS
Sbjct: 413 AEVEGQVREDAILTSNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVEVIRGEKTSE 472
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
+ I + +++ K PIVV +C GF VNR+ FPY L+ +G D +DR + KFG
Sbjct: 473 KAIATTVAYARQMGKNPIVVNDCPGFLVNRILFPYFGGFAALLAQGADFQRVDRLMEKFG 532
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGETTRKGFYLY 423
PMGP L D+VG A E FPER +S + + E +R G+ KGFY+Y
Sbjct: 533 WPMGPAYLMDVVGMDTAHHARDVMAEGFPERMKESRKTAVDALYEAQRFGQKNGKGFYVY 592
Query: 424 DERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
+ +K P DP V A ++ V + + + ++++IVE + P+ EA R
Sbjct: 593 ETDKKGKPKKVADPAV------AEVLAPVTYEQR--EFTDEEIVERMMVPLCLEAVRCLE 644
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
+GI AA+ D+ + G+GFPP+R
Sbjct: 645 DGIVESAAEADMGLIYGIGFPPFR 668
>gi|358450434|ref|ZP_09160897.1| multifunctional fatty acid oxidation complex subunit alpha
[Marinobacter manganoxydans MnI7-9]
gi|357225365|gb|EHJ03867.1| multifunctional fatty acid oxidation complex subunit alpha
[Marinobacter manganoxydans MnI7-9]
Length = 715
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 251/509 (49%), Gaps = 37/509 (7%)
Query: 13 AHSLGLVDAVVAPNQLVSTA----RQWALDILEH--RRPWVATLYKTDKIEPLGEAREIF 66
A +G VDAV+ ++LV A Q L+H RR K + +E + A EI
Sbjct: 179 ALKVGAVDAVLESDKLVDAAVAIINQCNEGKLDHEARREEKKGKIKLNAMESM-MAFEIS 237
Query: 67 K-FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
K F +A K P P+ I V++ ++ EA+ F K+ ++ LV +F
Sbjct: 238 KAFVAGKAGKNYP---APVEAIKVMQKHAGMTRDKAIEVEAKGFAKMAKTNVAACLVGLF 294
Query: 126 FAQR-----GTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ + D+ LA A+LG G+MG G+A L P+I+K++N+
Sbjct: 295 LNDQELKKKAKAWEKEANDVNLA-------AVLGAGIMGGGVAFQSALKGTPIIMKDINQ 347
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ G+ + L RV+KGKM ++ ++ +T L+Y FK+VD+V+EA++EN +
Sbjct: 348 DGIALGLKEAKKLLSKRVEKGKMKPDQMADVLNSITPTLNYGDFKNVDLVVEAVVENPKV 407
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K + + E IL SNTSTI ++L+ + + G HFF+P H+MPL+E++R
Sbjct: 408 KDAVLRETEDAVREDTILTSNTSTISIDLLAKNLKRPENFCGMHFFNPVHMMPLVEVIRG 467
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS + I + K + KTPIVV +C GF VNR+ FPY LV G D +D+
Sbjct: 468 EKTSDRAIATTVAYAKAMGKTPIVVNDCPGFLVNRVLFPYFGGFIGLVRDGADFQHVDKV 527
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK--SMIIPIMQEDKRAGETTRK 418
+ KFG PMGP L D+VG G + FP+R + I +M ++ R G+ K
Sbjct: 528 MEKFGWPMGPAYLLDVVGMDTGKHAGEVMADGFPDRMKHEGTTAIDVMFDNNRYGQKNDK 587
Query: 419 GFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY Y+ RK D E K +E + SE+DI+ + P+ E
Sbjct: 588 GFYKYELDRKGKQKKVVDEETYKLLEPVVQGKN--------EFSEEDIIARMMIPLCLET 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AD D+ + G+GFPP+R
Sbjct: 640 VRCLEDGIVEDPADADMGLIFGIGFPPFR 668
>gi|422633381|ref|ZP_16698525.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. pisi str. 1704B]
gi|330943678|gb|EGH45982.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 721
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/518 (32%), Positives = 264/518 (50%), Gaps = 37/518 (7%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP++L + A D R+P + L K + I
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPDKLQAAALDLIQRAISGEFDYKAKRQPKLDKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + + F QA PN P+ I ++ G L+ EA F K+ ++
Sbjct: 229 EQMMAFKTAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTA 285
Query: 117 TCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+SL+ +F Q K G + + VK+ A+LG G+MG GIA + P+++
Sbjct: 286 AAQSLIGLFLNDQELKKKAKGYDKIA---KDVKQAAVLGAGIMGGGIAYQSAVKGTPILM 342
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+EA++
Sbjct: 343 KDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVV 402
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+MPL+
Sbjct: 403 ENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLV 462
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 463 EVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFV 522
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAG 413
ID+ + KFG PMGP L D+VG E FP+R + I + + KR G
Sbjct: 523 RIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLG 582
Query: 414 ETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDIVEM 465
+ KGFY Y+ +K P DP V K + + R ++S++DIV
Sbjct: 583 QKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDIVNW 630
Query: 466 IFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 631 MMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|227015826|gb|ACP17923.1| putative multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas nitroreducens]
Length = 715
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 263/513 (51%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A +G VDAVVAP QL V A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVGAVDAVVAPEQLQAAALDLVKRAIAGELDHKARRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA+ F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEIEAQGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK A+LG G+MG GIA P+++K
Sbjct: 286 VAQSLIGLFLNDQDLKKKAKQYDE--IAKDVKLAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG+MT K + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLNEASKLLGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E +LASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQIVLAEVEGVVKEDAVLASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY L+ G D
Sbjct: 464 VIRGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G+
Sbjct: 524 IDKIMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++ P DP+ + ++ + ++ + +L+++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKPKKVTDPQAYELLKS------IVVEER--ELTDEDIINYMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVESAAEADMGLIYGIGFPPFR 668
>gi|403052188|ref|ZP_10906672.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter bereziniae LMG 1003]
Length = 717
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 260/513 (50%), Gaps = 25/513 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEP--LGE 61
TS + E A G VDAVVA ++L A + R W A + +K+EP L
Sbjct: 170 TSANKRPEAALKDGAVDAVVAADKLQEAAIDLVKQAISGRLDWKAK--RQEKLEPVKLDM 227
Query: 62 AREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ F ++ A+ P + +D ++AGV A L+ EAE F K +
Sbjct: 228 LEQMMAFNSSKGVVLAKANPAQYPAPKLLLDSLQAGVSQKRDAALKIEAEAFAKAAITPQ 287
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L+ +F + K + G P V + A+LG G+MG GIA P+I+K+
Sbjct: 288 AGALIGLFINDQVVKKASKKHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKD 345
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L G+ L +V++ KMT K +T++ + L Y+ FK+VD+VIEA+ EN
Sbjct: 346 IGNPQLALGMSEANKLLTKQVERKKMTPAKMGETLARIRPTLSYDEFKEVDIVIEAVTEN 405
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K+ + D E + I+ASNTSTI + + + + VG HFF+P H+MPL+E+
Sbjct: 406 PKIKEAVLKDTEAKVRDNTIIASNTSTISITRLAQALARPENFVGMHFFNPVHMMPLVEV 465
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LL++ G D +
Sbjct: 466 IRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLLKDGADFQQV 525
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGE 414
D+ + KFG PMGP L D+VG + E FP+R YK I IM E+KR G+
Sbjct: 526 DKVMEKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGA-IEIMYENKRLGQ 584
Query: 415 TTRKGFYLYDERRKA----SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
GFY Y+ RK + DP + + DP ++I++ +
Sbjct: 585 KNDVGFYKYELDRKGKKAKTVDPTAYDLVATMATTEKHEFDP-------QEIIDRMMLAF 637
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE R + I A++ D+A +MG+GFPP+R
Sbjct: 638 CNETVRCLEDNIVATASEADMAMIMGVGFPPFR 670
>gi|385331253|ref|YP_005885204.1| multifunctional fatty acid oxidation complex subunit alpha
[Marinobacter adhaerens HP15]
gi|311694403|gb|ADP97276.1| multifunctional fatty acid oxidation complex subunit alpha
[Marinobacter adhaerens HP15]
Length = 715
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 251/509 (49%), Gaps = 37/509 (7%)
Query: 13 AHSLGLVDAVVAPNQLVSTA----RQWALDILEH--RRPWVATLYKTDKIEPLGEAREIF 66
A +G VDAV+ ++LV A Q L+H RR K + +E + A EI
Sbjct: 179 ALKVGAVDAVLDSDKLVDAAVAIINQCNEGKLDHEARREEKKGKIKLNAMESM-MAFEIS 237
Query: 67 K-FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
K F +A K P P+ I V++ ++ EA+ F K+ ++ LV +F
Sbjct: 238 KAFVAGKAGKNYP---APVEAIKVMQKHAGMTRDKAIEVEAKGFAKMAKTNVAACLVGLF 294
Query: 126 FAQR-----GTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
+ + D+ LA A+LG G+MG G+A L P+I+K++N+
Sbjct: 295 LNDQELKKKAKAWEKEANDVNLA-------AVLGAGIMGGGVAFQSALKGTPIIMKDINQ 347
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ G+ + L RV+KGKM ++ ++ +T L+Y FK+VD+V+EA++EN +
Sbjct: 348 DGIALGLKEAKKLLSKRVEKGKMKPDQMADVLNSITPTLNYGDFKNVDLVVEAVVENPKV 407
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K + + E IL SNTSTI ++L+ + + G HFF+P H+MPL+E++R
Sbjct: 408 KDAVLRETEDAVREDTILTSNTSTISIDLLAKNLKRPENFCGMHFFNPVHMMPLVEVIRG 467
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS + I + K + KTPIVV +C GF VNR+ FPY LV G D +D+
Sbjct: 468 EKTSDRAIATTVAYAKAMGKTPIVVNDCPGFLVNRVLFPYFGGFIGLVRDGADFQHVDKV 527
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK--SMIIPIMQEDKRAGETTRK 418
+ KFG PMGP L D+VG G + FP+R + I +M ++ R G+ K
Sbjct: 528 MEKFGWPMGPAYLLDVVGMDTGKHAGEVMADGFPDRMKHEGTTAIDVMFDNNRYGQKNDK 587
Query: 419 GFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY Y+ RK D E K +E + SE+DI+ + P+ E
Sbjct: 588 GFYKYELDRKGKQKKVVDEETYKLLEPVVQGKN--------EFSEEDIIARMMIPLCLET 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AD D+ + G+GFPP+R
Sbjct: 640 VRCLEDGIVEDPADADMGLIFGIGFPPFR 668
>gi|410086602|ref|ZP_11283310.1| Enoyl-CoA hydratase [Morganella morganii SC01]
gi|409766822|gb|EKN50910.1| Enoyl-CoA hydratase [Morganella morganii SC01]
Length = 717
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 167/510 (32%), Positives = 261/510 (51%), Gaps = 20/510 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT + ++ ++A + L D +V P+ L+ TA AL +R V + +K++ L
Sbjct: 172 MMLTGRQLRAKQAVKMRLADDIVPPDILLETAVARALSANPAQRDPVPFRQRLEKMKGLR 231
Query: 61 EAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+ IF+ R+Q R+++ +P IDVV+ G+ G AG + EA F KL +
Sbjct: 232 DI--IFRITRSQVRRRSGG-HYPAAEQIIDVVQCGLEKGREAGFKAEAAAFGKLAVTPVS 288
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIAT-ALILSNYPVILKE 177
+L H+FFA K + G+ P + VA+LGGGLMG+GIAT + PV +K+
Sbjct: 289 GALRHLFFASTALKKE---SADGVKPAELHHVAVLGGGLMGAGIATITRQRAGLPVRIKD 345
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
V+++ + +L +VK+ +++ + + +S +TG DY F +D V EA+ E+
Sbjct: 346 VSQEGANKALAFFWQHLSKQVKRRRLSPRERTQLMSGMTGTTDYRGFHRIDFVAEAVFES 405
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQQ+ A++E P I ASNTS++ + I + ++++G H+FSPA MPL EI
Sbjct: 406 LALKQQMIAEIEAVTSPDTIFASNTSSLPIRDIAAKASRPEKVIGLHYFSPAEKMPLAEI 465
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ T + L + ++ KT IVVG+ GF VNR+ PY A + G I
Sbjct: 466 IPHEGTDAVTLATTLQLARRQGKTAIVVGDKAGFYVNRILAPYITEALRCLTEGEPPEKI 525
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+T FG P+GP L D VG V F ER + + D R G +
Sbjct: 526 DKALTDFGFPIGPVALLDEVGIDVGTKIMPVLEAAFGERFALPPQLDALFRDNRLGRKNK 585
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFA-----KLSEKDIVEMIFFPVVN 472
+GFY Y SP P K+ KA + AI P +L+ ++I E ++N
Sbjct: 586 RGFYDY------SPLPWWKRCGRKAPRKADKAIYPLLGITVQERLTSQEITERCLMMMLN 639
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPY 502
EA R E + AD D+ +V G+GF P+
Sbjct: 640 EAVRTLDEQVIRSPADGDVGAVFGIGFSPF 669
>gi|83721254|ref|YP_440951.1| fatty oxidation complex subunit alpha [Burkholderia thailandensis
E264]
gi|167617743|ref|ZP_02386374.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis Bt4]
gi|257140395|ref|ZP_05588657.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis E264]
gi|83655079|gb|ABC39142.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis E264]
Length = 708
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 259/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + EEA +LGLVD + + ++ + ++L P T +
Sbjct: 159 LMLSGRHASAEEALTLGLVDRLAHSDDTLAEGLAYVHELLAAGAPARRTRDAQGLADRAA 218
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ A+K L P +D V A + GL+ E F + L S
Sbjct: 219 AEAALEAARADVAKKSR-GLFSPAKIVDAVAAALALPFDEGLRTERRLFVECLDSPQRAG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R +K P T G+ PR ++++ ++GGG MG+GIA A + + +PV + E ++
Sbjct: 278 LVHAFFAEREAAKSP-ETRRGV-PRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE G V V KG+MT ++ G Y++ D+VIEA+ E++++
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYDALAQADVVIEAVFEDMAV 395
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L + C P +LA+NTS +D++ I ++G HFFSPA++M LLE+V
Sbjct: 396 KKSVFAELARACKPGAVLATNTSYLDIDEIAASVERTPDVIGLHFFSPANIMKLLEVVVP 455
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ ++ KK++K P+ G C GF NR+ Y AA ++E G Y IDRA
Sbjct: 456 AKVSADVVATAFELAKKLRKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I +FG PMGP+++ DL G + AT + R I + E G+ T +G+
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ I +AR+ GV+ P+ ++ +IV ++NE V
Sbjct: 576 YLYPDGARAGAPDPEVEAIIAEARAKKGVS--PR--AFTDDEIVRRYLAAMINEGANVVH 631
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP YR
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRYR 655
>gi|425898553|ref|ZP_18875144.1| fatty oxidation complex, alpha subunit [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397891431|gb|EJL07909.1| fatty oxidation complex, alpha subunit [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
Length = 715
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 257/513 (50%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP +L V A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPEKLHEAALATVKRAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEATGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAQDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEDQVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I ++ E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ I + +++++DIV + P+
Sbjct: 584 KNGKGFYAYEADKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIVNWMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|445414275|ref|ZP_21433932.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter sp.
WC-743]
gi|444764748|gb|ELW89056.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter sp.
WC-743]
Length = 717
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 261/513 (50%), Gaps = 25/513 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEP--LGE 61
TS + E A G VDAVVA ++L A + R W A + +K+EP L
Sbjct: 170 TSANKRPEAALKDGAVDAVVAADKLQEAAIDLVKQAISGRLDWKAK--RQEKLEPVKLDM 227
Query: 62 AREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ F ++ A+ P + +D ++AGV A L+ EAE F K +
Sbjct: 228 LEQMMAFNSSKGVVLAKANPAQYPAPKLLLDSLQAGVSQKRDAALKIEAEAFAKAAITPQ 287
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L+ +F + K + G P V + A+LG G+MG GIA P+I+K+
Sbjct: 288 AGALIGLFINDQVVKKASKKHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKD 345
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L G+ L +V++ KMT K +T++ + L Y+ FK+VD+VIEA+ EN
Sbjct: 346 IGNPQLALGMSEANKLLTKQVERKKMTPAKMGETLARIRPTLSYDEFKEVDIVIEAVTEN 405
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K+ + D E + I+ASNTSTI + + + + VG HFF+P H+MPL+E+
Sbjct: 406 PKIKEAVLKDTEAKVRDNTIIASNTSTISITRLAKALARPENFVGMHFFNPVHMMPLVEV 465
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LL++ G D +
Sbjct: 466 IRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLLKDGADFQQV 525
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGE 414
D+ + KFG PMGP L D+VG + E FP+R YK I IM E+KR G+
Sbjct: 526 DKVMEKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGA-IEIMYENKRLGQ 584
Query: 415 TTRKGFYLYDERRKA----SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
GFY Y+ RK+ + DP + + DP ++I++ +
Sbjct: 585 KNDVGFYKYELDRKSKKAKTVDPTAYDLVATMATTEKHEFDP-------QEIIDRMMLAF 637
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE R + I A++ D+A +MG+GFPP+R
Sbjct: 638 CNETVRCLEDNIVATASEADMAMIMGVGFPPFR 670
>gi|441505601|ref|ZP_20987583.1| 3-hydroxybutyryl-CoA epimerase [Photobacterium sp. AK15]
gi|441426684|gb|ELR64164.1| 3-hydroxybutyryl-CoA epimerase [Photobacterium sp. AK15]
Length = 725
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 255/517 (49%), Gaps = 20/517 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K K +A LGLVD VVAP++L A D ++ + W + PL
Sbjct: 166 IITAGKDKKAADALKLGLVDGVVAPDKLKDAAIAMLKDAIDGKLDWHHRREQKKAPLPLN 225
Query: 61 EAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ F A+ ++ P+ PI + +E L E + F KL +++
Sbjct: 226 KIEATMSFTTAKGMVSQIAGPHYPAPITSVITIEEAATLSRDEALAVENKHFTKLAKTDV 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++LV IF + A + K A+LG G+MG GIA L PV++K+
Sbjct: 286 AQALVSIFLNDQYIKGK--AKKAAKAGKATSKGAVLGAGIMGGGIAYQSALKGVPVLMKD 343
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ E LE G+G L ++++G++ K K +S + L Y + D+++EA++EN
Sbjct: 344 IAEPSLELGMGEAAKLLNKQLERGRIDGLKMAKVLSAIQPSLHYAGIEQTDVIVEAVVEN 403
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + +++E +L SNTSTI +NL+ + + G HFF+P H MPL+EI
Sbjct: 404 PKVKAAVLSEVEGLVSEDTVLTSNTSTIPINLLAKSLNRPENFCGMHFFNPVHRMPLVEI 463
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R QTS I ++ K+ K+PIVV +C GF VNR+ FPY +L+ G D I
Sbjct: 464 IRGEQTSDDTINRVVAYAAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSMLMRDGADFNKI 523
Query: 358 DRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRAGE 414
D+ + K FG PMGP L D+VG A E FPER K + +M E +R G+
Sbjct: 524 DKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAEGFPERMSKDYKDAVDVMFESQRFGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y RK P DP+V + +SG A+D S DI+ + P+
Sbjct: 584 KNGKGFYNYSVDRKGKPKKNADPDVTDLL---APVSGEAVD-----YSSDDIIARMMVPM 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
+NE R EGI A+ D+A V G+GFPP+R F
Sbjct: 636 INEVVRCLEEGIIASPAEADMALVYGLGFPPFRGGVF 672
>gi|407775890|ref|ZP_11123181.1| 3-hydroxyacyl-CoA dehydrogenase [Thalassospira profundimaris
WP0211]
gi|407280962|gb|EKF06527.1| 3-hydroxyacyl-CoA dehydrogenase [Thalassospira profundimaris
WP0211]
Length = 653
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 270/506 (53%), Gaps = 17/506 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + KP+ +A+ +GL+DA+ L AR +A IL P A L D I+
Sbjct: 151 MITSGKPISATKANEIGLLDAITH-GALGDAARDFAKTILSRGTP--AWLLARDPIDAPS 207
Query: 61 EAR--EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
A+ +I + +AR Q P+ I + G+ GP AGL E E F +L S+
Sbjct: 208 SAQWDDITSATKKKARGQ----VAPLAAISAIRNGIEHGPDAGLDFEREKFIELRDSDQS 263
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
K+L HIFFA+R +K+P + G+ P + +V ++GGG+MG+GIATA +L+ + V + E
Sbjct: 264 KALRHIFFAERSVAKLPELK--GVEPNPIHQVGVIGGGIMGAGIATASLLAGFDVTIIER 321
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+E + G V ++ +K+G ++Q++F+ ++ L+ +DY + D+V+EA+ E++
Sbjct: 322 DEAACDNGRATVEKHIAGSLKRGLISQDRFDALMASLSTSIDYAALSHADLVVEAVFEDM 381
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
++K +F L +C +LASNTS +D+N I R + R++G HFFSPAH+M LLE+V
Sbjct: 382 AVKHDVFGKLSLHCKADAVLASNTSYLDINEIASRCINPQRVIGLHFFSPAHIMKLLEVV 441
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
RT Q + + + + K + G C GF NR+ Y + ++E G ID
Sbjct: 442 RTKSADAQSLATAFEFARALGKIAVPCGVCDGFIGNRIMSAYRKHCEYMLEDGALPDQID 501
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIE-NFPERTYKSMIIPIMQEDKRAGETTR 417
A+ +FG PMG F + D+ G ++ AT + P Y ++ + E R G+
Sbjct: 502 AAMVEFGFPMGLFAMQDMAGLEISWATRKRLAPFRDPAERYVAL-GDYLCEMGRFGKKNG 560
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y YD+ KA PDPEV + + G+ + +I+++I + +E ++
Sbjct: 561 LGWYHYDDNGKAQPDPEVDALVIAESAKKGI----TRRDFTSTEILDVILGAMRSEGDKI 616
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
AEGIA A +D+ V G GFP ++
Sbjct: 617 LAEGIANNADAIDVVMVNGYGFPRHK 642
>gi|296104019|ref|YP_003614165.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295058478|gb|ADF63216.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 715
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 264/509 (51%), Gaps = 24/509 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
M+LT K ++ +A GLVD VV + L+ A + AL + RR L +++ P
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPHSILLEAAVELALKGRQARR----ALPVRERVLAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
LG A + +K N ++V+E G+ G +G EA+ F +L +
Sbjct: 223 LGRALLFSMVGKKTEQKTKGNYPATKRILEVIETGLSQGSSSGYAAEAKAFGELAMTPQS 282
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
++L IFFA K PG +D AP + V G G TA + PV +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAEPAPLKAVGVLGGGLMGGGIAFVTA-SKAKLPVRIKDI 340
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N K + + NL +VK+ + + +KT+++++G DY F D+VIEA+ E++
Sbjct: 341 NPKGINHALQYSWQNLDRKVKRRHIKASERDKTVAMISGTTDYRGFAHRDLVIEAVFEDL 400
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+LKQQ+ AD+E++C PH I ASNTS++ + I + ++++G HFFSP MPL+E++
Sbjct: 401 ALKQQMVADVEQHCAPHTIFASNTSSLPIGDIAAKAARPEQVIGLHFFSPVEKMPLVEVI 460
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
TSPQ + ++ + K KTPIVV + GF VNR+ PY A L+ G + +D
Sbjct: 461 PHASTSPQTVSTVVKLAKMQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEKIEHVD 520
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRAG 413
A+ KFG P+GP +L D VG I TG + I + ER + + I+ + +D R G
Sbjct: 521 EALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSPPANIVSAILKDDRKG 576
Query: 414 ETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
+GFYLY + + S KK ++ S+ G+ AKLS E ++NE
Sbjct: 577 RKNERGFYLYRAKGRKS-----KKQVDP--SVYGLIPTTGQAKLSAVQCAERCVMMMLNE 629
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPY 502
A R F E + A D DI +V G+GFPP+
Sbjct: 630 AARCFGEQVIKSARDGDIGAVFGIGFPPF 658
>gi|320164233|gb|EFW41132.1| mitochondrial trifunctional protein [Capsaspora owczarzaki ATCC
30864]
Length = 771
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 170/535 (31%), Positives = 266/535 (49%), Gaps = 47/535 (8%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAP----------NQLVSTARQWALDI---------LE 41
MMLT K V+ ++A LGL+DAVV N L + R+ + ++
Sbjct: 203 MMLTGKNVRADKAKKLGLIDAVVQSMGPGIADPIDNTLKNLEREAVIAAKALAAGKLKVD 262
Query: 42 HRRPWVA----TLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSG 97
P ++ T Y T+++E G + K +K N P+ IDVV AG+ G
Sbjct: 263 RSVPLLSVKGITKYLTEEVE-YGRNFVLQKARETVLKKTQGNYPAPLAIIDVVRAGLAGG 321
Query: 98 PRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGL 157
GLQ EA+ F KL ++ K+L+ ++F Q K G R + VA+LG GL
Sbjct: 322 FTNGLQAEAKAFGKLGMTDESKALIGLYFGQTALKK----NRYGAPERPTQNVAVLGAGL 377
Query: 158 MGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTG 217
MG+GIA I NY VILK++ + L G ++ NL +VK+ +T + ++ ++ ++
Sbjct: 378 MGAGIAQVSIEKNYNVILKDMKPEGLARGQAQIYKNLDGKVKRKSLTSFERDQLVARVSP 437
Query: 218 VLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSK 277
L Y++F +VDMVIEA+ E+++LKQ+I D+E PPH I ASNTS + + I + +
Sbjct: 438 QLTYQNFGEVDMVIEAVFEDLALKQRIIKDVEAVLPPHAIFASNTSALPIGEIAKASSRP 497
Query: 278 DRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMF 337
D+++G H+FSP MPLLEI+ T++TS + + +G K KT IVV + GF R+
Sbjct: 498 DKVIGMHYFSPVDKMPLLEIITTDKTSKETAAAAVQVGLKQGKTVIVVKDGPGFYTTRIL 557
Query: 338 FPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERT 397
P A + G D + +D+ + K+G P+G LAD VG V F R
Sbjct: 558 APMLAEAITTLTEGIDFFHLDKVMQKYGFPVGSVTLADEVGIDVGYHVSHDLGAAFKHRM 617
Query: 398 -----YKSMIIPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDP 452
++++ M + G + KG Y++ ER+ K + VAI
Sbjct: 618 GPGAERAALVLKEMVDKNFLGRKSGKGCYIWSERKGKG----------KVINEDAVAIFR 667
Query: 453 KFA----KLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
K+ + ++++ + + NEA EGI D DI +V G+GFPP +
Sbjct: 668 KYQTGPFTVPDEEVAFRLTGRMTNEAVYCLQEGILSSPVDGDIGAVFGLGFPPNK 722
>gi|440723880|ref|ZP_20904233.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae BRIP34876]
gi|440725354|ref|ZP_20905623.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae BRIP34881]
gi|440358770|gb|ELP96107.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae BRIP34876]
gi|440368817|gb|ELQ05838.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae BRIP34881]
Length = 721
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 266/521 (51%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP++L + A D R+P K DK+
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPDKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G + + VK+ A+LG G+MG GIA + P
Sbjct: 283 KTAAAQSLIGLFLNDQELKKKAKGYDKIA---KDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + I + + K
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAK 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
V + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 VNWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|167579665|ref|ZP_02372539.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis TXDOH]
Length = 708
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 259/504 (51%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + EEA +LGLVD + + ++ + ++L P T +
Sbjct: 159 LMLSGRHASAEEALTLGLVDRLAHSDDTLAEGLAYVHELLAAGAPARRTRDAQGLADRAA 218
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ A+K L P +D V A + GL+ E F + L S
Sbjct: 219 AEAALEAARADVAKKSR-GLFSPAKIVDAVAAALALPFDEGLRTERRLFVECLDSPQRAG 277
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFA+R +K P T G+ PR ++++ ++GGG MG+GIA A + + +PV + E ++
Sbjct: 278 LVHAFFAEREAAKSP-ETRRGV-PRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE G V V KG+MT ++ G Y++ D+VIEA+ E++++
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYDALAQADVVIEAVFEDMAV 395
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +FA+L + C P +LA+NTS +D++ I ++G HFFSPA++M LLE+V
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDEIAASVERTPDVIGLHFFSPANIMKLLEVVVP 455
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+ S V+ ++ KK++K P+ G C GF NR+ Y AA ++E G Y IDRA
Sbjct: 456 AKVSADVVATAFELAKKLRKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I +FG PMGP+++ DL G + AT + R I + E G+ T +G+
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
YLY D R +PDPEV+ I +AR+ GV+ P+ ++ +IV ++NE V
Sbjct: 576 YLYPDGARAGAPDPEVEAIIAEARAKKGVS--PR--AFTDDEIVRRYLAAMINEGANVVH 631
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP YR
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRYR 655
>gi|424068433|ref|ZP_17805887.1| fatty oxidation complex subunit alpha [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|407997587|gb|EKG38023.1| fatty oxidation complex subunit alpha [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 721
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 266/521 (51%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP++L + A D R+P K DK+
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPDKLQGAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G + + VK+ A+LG G+MG GIA + P
Sbjct: 283 KTAAAQSLIGLFLNDQELKKKAKGYDKIA---KDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + I + + K
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAK 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
V + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 VNWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|424072849|ref|ZP_17810269.1| fatty oxidation complex subunit alpha [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407996880|gb|EKG37333.1| fatty oxidation complex subunit alpha [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 721
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 266/521 (51%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP++L + A D R+P K DK+
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPDKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G + + VK+ A+LG G+MG GIA + P
Sbjct: 283 KTAAAQSLIGLFLNDQELKKKAKGYDKIA---KDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + I + + K
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAK 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
V + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 VNWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|389685142|ref|ZP_10176466.1| fatty oxidation complex, alpha subunit [Pseudomonas chlororaphis
O6]
gi|388550795|gb|EIM14064.1| fatty oxidation complex, alpha subunit [Pseudomonas chlororaphis
O6]
Length = 715
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 256/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP +L V A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPEKLHEAALATVKRAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAHDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEDQVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I ++ E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ I + +++++DIV + P+
Sbjct: 584 KNGKGFYAYEADKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIVNWMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|295098035|emb|CBK87125.1| short chain enoyl-CoA hydratase /3-hydroxyacyl-CoA dehydrogenase
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 715
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 174/513 (33%), Positives = 257/513 (50%), Gaps = 32/513 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
M+LT K ++ +A GLVD VV L+ A + AL + +RP L ++I P
Sbjct: 167 MILTGKQLRARQALKSGLVDEVVPHAILLEAAVERALKGRQAKRP----LPVRERILAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
LG + +K N + V+E G+ G +G EA+ F +L +
Sbjct: 223 LGRTLLFNMVGKKTEQKTKGNYPAATRILKVIETGLSQGSSSGYAAEAKAFGELAMTPQS 282
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
++L IFFA K PG ++ AP R V G G TA PV +K++
Sbjct: 283 QALRGIFFASTEVKKDPG-SEAEPAPLRAVGVLGGGLMGGGIAFVTA-SKGKLPVRIKDI 340
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N K + + NL +VK+ + + +KT+S++TG DY F D+VIEA+ E++
Sbjct: 341 NPKGINHALQYSWQNLDRKVKRRHIKASERDKTLSMITGATDYSGFAHRDLVIEAVFEDL 400
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+LKQQ+ AD+E++C PH I ASNTS++ + I + ++++G H+FSP MPL+E++
Sbjct: 401 ALKQQMVADVEQHCAPHTIFASNTSSLPIGDIAAKAVRPEQVIGLHYFSPVEKMPLVEVI 460
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
TSPQ I ++ + KK+ KTPIVV + GF VNR+ PY A L+ G + +D
Sbjct: 461 PHATTSPQTIATVVKLAKKLGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVD 520
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIP------IMQEDKRA 412
A+ KFG P+GP +L D VG I TG + I E Y P + +D R
Sbjct: 521 DALVKFGFPVGPIQLLDEVG----IDTGTKIIPVL-EAAYGDRFAPPANFVSAILKDDRK 575
Query: 413 GETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
G +GFYLY + + S DP V I ++G KLS E
Sbjct: 576 GRKNERGFYLYAAKGRKSKKQVDPSVYALI----PVTGQ------GKLSAVQCAERCVMM 625
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E + A D DI +V G+GFPP+
Sbjct: 626 MLNEAARCFGEQVIKSARDGDIGAVFGIGFPPF 658
>gi|430375780|ref|ZP_19430183.1| multifunctional fatty acid oxidation complex subunit alpha
[Moraxella macacae 0408225]
gi|429541011|gb|ELA09039.1| multifunctional fatty acid oxidation complex subunit alpha
[Moraxella macacae 0408225]
Length = 726
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 257/516 (49%), Gaps = 18/516 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ T+KP+K EA +GLVDAVV+ L A ++ W + +K+ P+
Sbjct: 170 LIATAKPLKPMEALKIGLVDAVVSEQNLEQAAIDLVKKCIKGDLDWQGRV--AEKLNPVK 227
Query: 61 ----EAREIFKFARAQARKQAPNLTHPIVC--IDVVEAGVVSGPRAGLQKEAEDFQKLLR 114
E F A+A +A +P V ID +E V + EA +F K +
Sbjct: 228 LNQLEQSMAFNSAKAVIFAKANPKHYPAVALAIDAIEQHVNLPRDKAIDIEAANFAKAAK 287
Query: 115 SETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
+ +LV +F + K+ +++ A+LG G+MG GIA P+I
Sbjct: 288 TNQATALVGVFLNDQAVKKL--AKKHAQNAHDIQQAAVLGAGIMGGGIAYQAASQGLPII 345
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K++ + LE G+ L +V++GK+T K +T+S + L+Y F D+VIEA+
Sbjct: 346 MKDIKPEQLELGMNEAAKLLAKQVERGKLTAAKMGQTLSQIRPTLNYGDFGTTDIVIEAV 405
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
+EN +K + ++E CILASNTSTI + + + VG HFF+P H MPL
Sbjct: 406 VENPKVKTAVLTEVEDLVTDDCILASNTSTISITQLAKALKRPQNFVGMHFFNPVHRMPL 465
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+R Q+S Q I + + +K+ KTPIVV +C GF VNR+ FPY A LL+++G D
Sbjct: 466 VEIIRGEQSSEQAIATTVALAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLIKQGADF 525
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKR 411
ID+A+ +FG PMGP L D+VG + E FP+R +K I + + D R
Sbjct: 526 VQIDKAMEQFGWPMGPAYLMDVVGLDTGVHGAAVMAEGFPDRMKPDFKGSIAHLFEHD-R 584
Query: 412 AGETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
G+ GFY Y+ +K P D + ++ + S + I++ +
Sbjct: 585 LGQKNGLGFYKYETDKKGKPKKSVDDNTYQLLKDVQDNPNSDNQNNKQNFSNEQIIDRMM 644
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE R + I A+ D+A +MG+GFPP+R
Sbjct: 645 LAFCNETVRCLEDNIVATPAEADMAMLMGLGFPPFR 680
>gi|443643279|ref|ZP_21127129.1| Multifunctional fatty acid oxidation complex, alpha subunit
[Pseudomonas syringae pv. syringae B64]
gi|443283296|gb|ELS42301.1| Multifunctional fatty acid oxidation complex, alpha subunit
[Pseudomonas syringae pv. syringae B64]
Length = 721
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 266/521 (51%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP++L + A D R+P K DK+
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPDKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G + + VK+ A+LG G+MG GIA + P
Sbjct: 283 KTAAAQSLIGLFLNDQELKKKAKGYDKIA---KDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + I + + K
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAK 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
V + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 VNWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|422299272|ref|ZP_16386845.1| fatty oxidation complex subunit alpha [Pseudomonas avellanae BPIC
631]
gi|407988879|gb|EKG31304.1| fatty oxidation complex subunit alpha [Pseudomonas avellanae BPIC
631]
Length = 721
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 167/521 (32%), Positives = 266/521 (51%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G+VDAVVAP +L + A D R+P K DK+
Sbjct: 170 SGKENSAEDALKVGVVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G ++ R VK+ A+LG G+MG GIA + P
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +K + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKPAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + I + E
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAN 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY+Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 INWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|15598210|ref|NP_251704.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa PAO1]
gi|116051015|ref|YP_790158.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa UCBPP-PA14]
gi|218890787|ref|YP_002439651.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa LESB58]
gi|254235987|ref|ZP_04929310.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
C3719]
gi|254241717|ref|ZP_04935039.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
2192]
gi|313108304|ref|ZP_07794336.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
39016]
gi|355641251|ref|ZP_09052136.1| fatty acid oxidation complex subunit alpha [Pseudomonas sp. 2_1_26]
gi|386058012|ref|YP_005974534.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa M18]
gi|386067046|ref|YP_005982350.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa NCGM2.S1]
gi|416857746|ref|ZP_11912934.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa 138244]
gi|418586418|ref|ZP_13150460.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa MPAO1/P1]
gi|418590973|ref|ZP_13154877.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa MPAO1/P2]
gi|420139158|ref|ZP_14647016.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa CIG1]
gi|421153542|ref|ZP_15613084.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa ATCC 14886]
gi|421159671|ref|ZP_15618786.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa ATCC 25324]
gi|421166838|ref|ZP_15625059.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa ATCC 700888]
gi|421173788|ref|ZP_15631525.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa CI27]
gi|421179825|ref|ZP_15637399.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa E2]
gi|421517544|ref|ZP_15964218.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa PAO579]
gi|424942383|ref|ZP_18358146.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
NCMG1179]
gi|451985347|ref|ZP_21933569.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Pseudomonas aeruginosa
18A]
gi|81622253|sp|Q9HZJ2.1|FADB_PSEAE RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|122260146|sp|Q02PH8.1|FADB_PSEAB RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|254788570|sp|B7UYR6.1|FADB_PSEA8 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|9949116|gb|AAG06402.1|AE004726_8 fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
PAO1]
gi|115586236|gb|ABJ12251.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126167918|gb|EAZ53429.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
C3719]
gi|126195095|gb|EAZ59158.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
2192]
gi|218771010|emb|CAW26775.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
LESB58]
gi|310880838|gb|EFQ39432.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
39016]
gi|334840255|gb|EGM18914.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa 138244]
gi|346058829|dbj|GAA18712.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
NCMG1179]
gi|347304318|gb|AEO74432.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa M18]
gi|348035605|dbj|BAK90965.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa NCGM2.S1]
gi|354830849|gb|EHF14881.1| fatty acid oxidation complex subunit alpha [Pseudomonas sp. 2_1_26]
gi|375043161|gb|EHS35792.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa MPAO1/P1]
gi|375050214|gb|EHS42697.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa MPAO1/P2]
gi|403248080|gb|EJY61678.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa CIG1]
gi|404347026|gb|EJZ73375.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa PAO579]
gi|404523510|gb|EKA33930.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa ATCC 14886]
gi|404535312|gb|EKA45013.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa CI27]
gi|404536536|gb|EKA46173.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa ATCC 700888]
gi|404546403|gb|EKA55457.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa E2]
gi|404546591|gb|EKA55641.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa ATCC 25324]
gi|451756964|emb|CCQ86092.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Pseudomonas aeruginosa
18A]
gi|453043747|gb|EME91475.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa PA21_ST175]
Length = 715
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 263/513 (51%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA-------LDILEHRRPWVATLYKTDKI 56
+ K K E+A +G VDAVVAP QL + A A LD R+P + L K + I
Sbjct: 170 SGKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK A+LG G+MG GIA L P+++K
Sbjct: 286 VAQSLIGLFLNDQELKKKAKKYDE--VAKDVKLAAVLGAGIMGGGIAYQSALKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T K + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E I+ASNTSTI ++L+ + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +T I + KK+ K+PIVV +C GF VNR+ FPY L+ G D
Sbjct: 464 VIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++ P DP+ + ++ + ++ + +++++DIV + P+
Sbjct: 584 KNGKGFYAYETDKRGKPKKVTDPQAYEVLKP------IVVEQR--EVTDEDIVNFMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|422617927|ref|ZP_16686627.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. japonica str. M301072]
gi|330898307|gb|EGH29726.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. japonica str. M301072]
Length = 721
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 266/521 (51%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP++L + A D R+P K DK+
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPDKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G + + VK+ A+LG G+MG GIA + P
Sbjct: 283 KTAAAQSLIGLFLNDQELKKKAKGYDKIA---KDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + I + + K
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAK 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
V + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 VNWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|440746454|ref|ZP_20925738.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae BRIP39023]
gi|440371254|gb|ELQ08104.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae BRIP39023]
Length = 721
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 269/524 (51%), Gaps = 49/524 (9%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEH-----------RRPWVATLYK 52
+ K E+A +G VDAVVAP++L + A LD+++ R+P K
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPDKLQAAA----LDLIQRAISGEFDHKAKRQP------K 219
Query: 53 TDKIEPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDF 109
DK++ L ++ F A+ A + PN P+ I ++ G L+ EA F
Sbjct: 220 LDKLK-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGF 278
Query: 110 QKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILS 169
K+ ++ +SL+ +F + K D + VK+ A+LG G+MG GIA +
Sbjct: 279 VKMAKTAAAQSLIGLFLNDQELKKKAKAYDK--IAKDVKQAAVLGAGIMGGGIAYQSAVK 336
Query: 170 NYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDM 229
P+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+
Sbjct: 337 GTPILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDL 396
Query: 230 VIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPA 289
V+EA++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P
Sbjct: 397 VVEAVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPV 456
Query: 290 HVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVE 349
H+MPL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV
Sbjct: 457 HMMPLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVS 516
Query: 350 RGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQ 407
G D ID+ + KFG PMGP L D+VG E FP+R + I +
Sbjct: 517 AGVDFVRIDKIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALY 576
Query: 408 EDKRAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSE 459
+ KR G+ KGFY Y+ +K P DP V K + + R ++S+
Sbjct: 577 DAKRLGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSD 624
Query: 460 KDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+DIV + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 625 EDIVNWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|422665754|ref|ZP_16725625.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. aptata str. DSM 50252]
gi|330976173|gb|EGH76237.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 721
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 266/521 (51%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP++L + A D R+P K DK+
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPDKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G + + VK+ A+LG G+MG GIA + P
Sbjct: 283 KTAAAQSLIGLFLNDQELKKKAKGYDKIA---KDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + I + + K
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAK 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
V + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 VNWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|408374695|ref|ZP_11172379.1| multifunctional fatty acid oxidation complex subunit alpha
[Alcanivorax hongdengensis A-11-3]
gi|407765503|gb|EKF73956.1| multifunctional fatty acid oxidation complex subunit alpha
[Alcanivorax hongdengensis A-11-3]
Length = 715
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 257/505 (50%), Gaps = 21/505 (4%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG----EARE 64
+ ++A +G+ DAVV + L + A L + + A + +K+EPL E
Sbjct: 175 RADKALKVGVADAVVEHDNLQAAAIDLVKQCLAGKIDFRAK--RQEKLEPLKLPPMENMM 232
Query: 65 IFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F+ A +QA N P+ + ++A L+ EA+ F K+ +S +LV
Sbjct: 233 AFQTCMAMVAQQAGKNYPAPVAAVKAMQAHAGMTRDKALEVEAKGFAKVAKSPQATALVG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F A + KV G T A + + + A+LG G+MG GIA L P+I+K++ +K L
Sbjct: 293 LFLADQQVKKVNGKT--AKASKEINQAAVLGAGIMGGGIAFQSALKGTPIIMKDIADKAL 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
+ G+ L RV KGKM K + +S + L+Y F V++++EA++EN +KQ
Sbjct: 351 DLGMNEASKLLAKRVSKGKMDAAKMGQVLSSIRPTLNYGDFDHVNVIVEAVVENQKIKQS 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A+ E ILASNTSTI + + E + G HFF+P H+MPL+E++R +T
Sbjct: 411 VLAETEGKVAEGTILASNTSTISITKLAEALKKPENFAGMHFFNPVHMMPLVEVIRGEKT 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S + + L+ +K+ K PIVV +C GF VNR+ FPY +L+ G D +D+ + K
Sbjct: 471 SDETVATLVAYAQKMGKNPIVVNDCPGFLVNRVLFPYFGGFGMLMRDGADFEAVDKVMQK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG + E FPER + +M E++R G+ GFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGVHAAQVMAEGFPERMQYDFKDVSTVMYENERYGQKNGVGFY 590
Query: 422 LYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMI---FFPVVNEACRVF 478
Y+ +K P K EK + I P A+ E D E+I P+ E R
Sbjct: 591 RYETDKKGKPK---KVADEKTWEL----IKPHVAETREFDAEEIIARMMIPMCTETVRCL 643
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
+ I AA+ D+A + G+GFPP+R
Sbjct: 644 EDNIVGSAAEADMAMIYGIGFPPFR 668
>gi|440227692|ref|YP_007334783.1| peroxisomal bifunctional enzyme [Rhizobium tropici CIAT 899]
gi|440039203|gb|AGB72237.1| peroxisomal bifunctional enzyme [Rhizobium tropici CIAT 899]
Length = 655
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 262/504 (51%), Gaps = 16/504 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ + V EA LG+VD V +L++ A I + + +L +T +
Sbjct: 157 MIANGRIVSAAEALKLGIVDGVT-KGELIAEA------IADAKMTNAVSLRRTGSLTVPP 209
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EA + A + A ++A P + +V GL +E F L SE +
Sbjct: 210 EATDAIDKAASDASRKARGQRAPSEAVRLVRLAATVSLSEGLAEERRTFIALRDSEEAAA 269
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+FFA+R KV G+ + APR+++ + I+G GLMGSGIA + + Y VI E +
Sbjct: 270 LRHVFFAERAAGKVEGLETV--APRKIETIGIVGTGLMGSGIAVSALNGGYRVIGVEQSA 327
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ E G R+ A L V+ G++ E + LT D + D++IEA+ +++++
Sbjct: 328 EVAEKGRERITALLDKAVQSGRLDAAGREDRLGRLTVTADMQQLVQADLIIEAVFDDLTV 387
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K ++F L+ ILA+NTS +D +++ T +R+VG HFFSPA++M LLE+V
Sbjct: 388 KTELFQCLDSIVRAEAILATNTSYLDPDVVAAATQRPERVVGLHFFSPANIMRLLEVVNC 447
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
QT+P V+ + + K++ K PIV G GF NR+F Y + A +VE G ID A
Sbjct: 448 KQTAPDVLATAIALAKRLGKLPIVSGVTEGFIGNRIFSAYRREAEYMVEDGASPQEIDAA 507
Query: 361 ITKFGMPMGPFRLADLVGFGVAIA-TGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
+ +G PMGPF + D+ G +A A Q P Y +I + E R G+ T +G
Sbjct: 508 LEAYGFPMGPFAVFDMAGLEIAWARRKRQAATRDPAERY-VVIADRLCEAGRFGQKTGRG 566
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
+Y Y + ++ + DPEV IE AR+ AI PK + ++IV + +V+E + +
Sbjct: 567 WYAYPDGKR-TDDPEVTAMIEAARAEK--AIVPK--SFTPEEIVSRLLKAMVDEGEALLS 621
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
EGIA +A+D+D+ + G GFP +
Sbjct: 622 EGIAARASDIDLVMINGYGFPASK 645
>gi|399004941|ref|ZP_10707543.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM17]
gi|398128082|gb|EJM17480.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM17]
Length = 715
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 256/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP +L V A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPEKLHEAALATVKRAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEATGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAHDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEDQVKEGTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I ++ E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ I + +++++DIV + P+
Sbjct: 584 KNGKGFYAYEADKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIVNWMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|422596046|ref|ZP_16670330.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|330986347|gb|EGH84450.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. lachrymans str. M301315]
Length = 721
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 164/520 (31%), Positives = 263/520 (50%), Gaps = 41/520 (7%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP +L + A D R+P K DK+
Sbjct: 170 SGKESSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
++ +SL+ +F + K D + VK+ A+LG G+MG GIA + P+
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDA--VAKDVKQAAVLGAGIMGGGIAYQSAVKGTPI 340
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+EA
Sbjct: 341 LMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEA 400
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
++EN +KQ + A++E H +LASNTSTI ++L+ + + VG HFF+P H+MP
Sbjct: 401 VVENPKVKQAVLAEVEANVGEHTVLASNTSTISISLLAKALKRPENFVGMHFFNPVHMMP 460
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R ++S + + + +K+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 461 LVEVIRGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVD 520
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKR 411
ID+ + KFG PMGP L D+VG E FP+R + + + E R
Sbjct: 521 FVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANR 580
Query: 412 AGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDIV 463
G+ KGFY Y+ +K P DP V K + + R ++S++DI+
Sbjct: 581 LGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDII 628
Query: 464 EMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 629 NWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|429214907|ref|ZP_19206069.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. M1]
gi|428154134|gb|EKX00685.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. M1]
Length = 715
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 262/513 (51%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A +G VDAVVAP QL V A LD R+P + + K + I
Sbjct: 170 SGKENRAEDALKVGAVDAVVAPEQLQAAALDLVKRAIAGELDHKARRQPKLEKI-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA+ F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAQGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK A+LG G+MG GIA + P+++K
Sbjct: 286 VAQSLIGLFLNDQELKKKAKQYDE--VAKDVKLAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T K + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLNEASKLLGKRVEKGRLTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQIVLAEVEGVVKEDAILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++ + + KK+ K PIVV +C GF VNR+ FPY L+ G D
Sbjct: 464 VIRGEKSGDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFAR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++ P DP+ + ++ AI + +LS++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKPKKVSDPQAYELLK--------AIVSEQRELSDEDIINYMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|224157637|ref|XP_002198586.1| PREDICTED: peroxisomal bifunctional enzyme-like, partial
[Taeniopygia guttata]
Length = 459
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 229/432 (53%), Gaps = 21/432 (4%)
Query: 69 ARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQ 128
A + +KQA P +C V A G+++E E FQ LL S ++L + FFA+
Sbjct: 26 ALVKVKKQARGCLAPELCFQAVRAAAERPFAEGVRRERELFQVLLTSGQARALQYAFFAE 85
Query: 129 RGTSKV---PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
R + G + AP+ V+K A++G G MG GI T+L+ +N P++ E + ++L
Sbjct: 86 RAVRRWDTPSGASWSSAAPQPVRKAAVIGLGTMGRGIVTSLVKANIPLVALEQDLEYLNK 145
Query: 186 GIGRVRANLQSRVKKGKMTQEKFE-KTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQI 244
G V L+ K + + + + L +D++ DVD+VIEA+ EN++LK++I
Sbjct: 146 GRKAVMLLLEREAMKMERGAQALDFHNPARLQFTVDFDLLHDVDLVIEAVFENMALKKEI 205
Query: 245 FADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTS 304
F L K C P +L +NTS ++++ I T +++G HFFSPAHVM LLEI+ TS
Sbjct: 206 FHKLSKICKPGALLCTNTSALNIDEIASATSCPQQVIGTHFFSPAHVMRLLEIIYGRHTS 265
Query: 305 PQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKF 364
P I + + K +KK +VVGNC GF NRM FPY Q A L+E G+ +D+ + F
Sbjct: 266 PTAIATAMQLAKALKKVGVVVGNCFGFVGNRMMFPYVQQAVFLLEEGSRPEAVDQVLEDF 325
Query: 365 GMPMGPFRLADLVGFGVAIA-------TGMQFIENFPERTYK----SMIIPIMQEDKRAG 413
G +GPFR++DL G V TG P R + S + ++ E R G
Sbjct: 326 GFKLGPFRMSDLAGLDVGWRSRKDQGLTGPSLPAGTPARQRQGQRYSPLPDLLCEQGRFG 385
Query: 414 ETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
+ T KG+Y Y+ R A+PDP + F+ R I +F + +++I+E F ++
Sbjct: 386 QKTGKGWYQYERAGGRTATPDPWLHSFLSHYRDTH--HIKTRF--IDQEEILERCLFSLI 441
Query: 472 NEACRVFAEGIA 483
NE + AEGIA
Sbjct: 442 NEGFAILAEGIA 453
>gi|296388491|ref|ZP_06877966.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa PAb1]
gi|416874145|ref|ZP_11917955.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa 152504]
gi|334843784|gb|EGM22368.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa 152504]
Length = 715
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 263/513 (51%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA-------LDILEHRRPWVATLYKTDKI 56
+ K K E+A +G VDAVVAP QL + A A LD R+P + L K + I
Sbjct: 170 SGKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK A+LG G+MG GIA L P+++K
Sbjct: 286 VAQSLIGLFLNDQELKKKAKKYDE--VAKDVKLAAVLGAGIMGGGIAYQSALKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T K + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E I+ASNTSTI ++L+ + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +T I + KK+ K+PIVV +C GF VNR+ FPY L+ G D
Sbjct: 464 VIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++ P DP+ + ++ + ++ + +++++DIV + P+
Sbjct: 584 KNGKGFYAYETDKRGKPKKVTDPQAYEVLKP------IVVEQR--EVTDEDIVNFMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|107102564|ref|ZP_01366482.1| hypothetical protein PaerPA_01003628 [Pseudomonas aeruginosa PACS2]
Length = 696
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 263/513 (51%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA-------LDILEHRRPWVATLYKTDKI 56
+ K K E+A +G VDAVVAP QL + A A LD R+P + L K + I
Sbjct: 151 SGKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL-KLNAI 209
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 210 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 266
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK A+LG G+MG GIA L P+++K
Sbjct: 267 VAQSLIGLFLNDQELKKKAKKYDE--VAKDVKLAAVLGAGIMGGGIAYQSALKGTPILMK 324
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T K + ++ + + Y F +VD+V+EA++E
Sbjct: 325 DIREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVE 384
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E I+ASNTSTI ++L+ + + G HFF+P H+MPL+E
Sbjct: 385 NPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVE 444
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +T I + KK+ K+PIVV +C GF VNR+ FPY L+ G D
Sbjct: 445 VIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVR 504
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G+
Sbjct: 505 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 564
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++ P DP+ + ++ + ++ + +++++DIV + P+
Sbjct: 565 KNGKGFYAYETDKRGKPKKVTDPQAYEVLKP------IVVEQR--EVTDEDIVNFMMIPL 616
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 617 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 649
>gi|410092023|ref|ZP_11288566.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas viridiflava UASWS0038]
gi|409760679|gb|EKN45806.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas viridiflava UASWS0038]
Length = 715
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 267/517 (51%), Gaps = 35/517 (6%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP +L + A D R+P K DK+
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPEKLQAAALDLIKRAISGEFDFKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G ++ + VK+ A+LG G+MG GIA + P
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDEIA---KDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L +RV KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGNRVDKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEAQVGENTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + + ++ E
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAN 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMI 466
R G+ KGFY Y+ +K P DP V ++ + + + +++++DI+ +
Sbjct: 580 RLGQKNGKGFYAYEMDKKGKPKKVNDPAVLDVLKP------IVFEQR--EVTDEDIINWM 631
Query: 467 FFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 632 MIPLCMETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|70729322|ref|YP_259059.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas protegens Pf-5]
gi|83288144|sp|Q4KFC4.1|FADB_PSEF5 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|68343621|gb|AAY91227.1| fatty oxidation complex, alpha subunit [Pseudomonas protegens Pf-5]
Length = 715
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 259/513 (50%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP++L V A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPDKLKDAALALVKRAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQIVLAEVEGQVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + ++ E KR G+
Sbjct: 524 IDKIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ I + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|113969750|ref|YP_733543.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella sp. MR-4]
gi|123029798|sp|Q0HKD1.1|FADJ_SHESM RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|113884434|gb|ABI38486.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Shewanella sp. MR-4]
Length = 709
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 177/510 (34%), Positives = 264/510 (51%), Gaps = 21/510 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL +P +L +E G
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRTAKPVKKSLV-NQLLEGTG 223
Query: 61 EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I + A+ A+K N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQAAKQVAKKTQGNYPAPAKIIDCVRQGMAKGMQKGLEVEASHFAELVVSKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G PR+VKK ILGGGLMG GIA+ + P +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+NEK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 342 INEKGLSNALSYAYKLLDKGVKRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ + I + + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSIEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKIAPILEKELGERFKAPAAFDKLLSDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-----AIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y KA P KK +++ S+ GV ID + + ++E+ +V+M+ N
Sbjct: 582 KGFYQYAAGNKA---PSKKKAVDE--SVYGVLGIKPGIDKEMSAVAERCVVQML-----N 631
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPY 502
EA R +GI D DI ++ G+GFPP+
Sbjct: 632 EAVRCLDDGIIASPRDGDIGAIFGIGFPPF 661
>gi|84500553|ref|ZP_00998802.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Oceanicola batsensis HTCC2597]
gi|84391506|gb|EAQ03838.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Oceanicola batsensis HTCC2597]
Length = 699
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/433 (34%), Positives = 231/433 (53%), Gaps = 13/433 (3%)
Query: 74 RKQAPNLTHPIVCIDVVEAGVVSGP-RAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTS 132
+K+ P+L + C+ + A + P GL E E F + S L+H FF +R S
Sbjct: 226 QKKNPHLINLAECVKAIAAS--TKPIDEGLAAEREHFLVCMNSPQRSGLIHAFFGERAVS 283
Query: 133 KVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRA 192
+P R + K+ ++GGG MGSGI T+ +++ PV L EV ++ L+ G+ +
Sbjct: 284 NIPEAKG---ETRSLDKIGVIGGGTMGSGITTSCLMAGIPVRLIEVQQEGLDRGVATITK 340
Query: 193 NLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYC 252
NL + +GKMT +K + +++L L+ E DVD+VIEA+ E + +K+ IF L C
Sbjct: 341 NLDGALSRGKMTSDKRDAALAMLEPSLNMEDLSDVDLVIEAVFEKMEIKKDIFGKLNTIC 400
Query: 253 PPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLL 312
P ILASNTS +D++ I T ++G HFFSPAHVM LLEIV+ +T+P +
Sbjct: 401 KPGAILASNTSYLDIDKIAATTDRPQDVLGLHFFSPAHVMRLLEIVQGEKTAPDALATGF 460
Query: 313 DIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFR 372
+ KK+KK ++ C GF NR+ Y + LV G +D A+ FGM MGP +
Sbjct: 461 ALAKKLKKVGVLAQVCDGFIGNRILGHYGKVISYLVLDGASPAEVDTALENFGMAMGPHK 520
Query: 373 LADLVGFGVAIATGMQFI-ENFP-ERTYKSMIIPIMQEDKRAGETTRKGFYLYDERRKAS 430
+ DL G + T + E P + Y I + E + G T KG+YLY E
Sbjct: 521 VGDLAGLDIGYMTRQRRKEEGLPADERYGGDIADRICEREGYGRKTGKGYYLY-ETGAPV 579
Query: 431 PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLD 490
P+P V + I++ R+ G I PK + +E++IV+ ++EA RV +G A + D+D
Sbjct: 580 PNPAVDEIIDEVRAEKG--ITPK--EFTEQEIVDRYMTAFISEATRVVEDGTAKRPIDVD 635
Query: 491 IASVMGMGFPPYR 503
+ + G GFP +R
Sbjct: 636 MVFLFGYGFPRFR 648
>gi|392983259|ref|YP_006481846.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa DK2]
gi|419756485|ref|ZP_14282835.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa PADK2_CF510]
gi|384397216|gb|EIE43629.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa PADK2_CF510]
gi|392318764|gb|AFM64144.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa DK2]
Length = 715
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 263/513 (51%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA-------LDILEHRRPWVATLYKTDKI 56
+ K K E+A +G VDAVVAP QL + A A LD R+P + L K + I
Sbjct: 170 SGKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK A+LG G+MG GIA L P+++K
Sbjct: 286 VAQSLIGLFLNDQELKKKAKKYDE--VAKDVKLAAVLGAGIMGGGIAYQSALKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T K + ++ + + Y F +VD+++EA++E
Sbjct: 344 DIREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIIVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E I+ASNTSTI ++L+ + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +T I + KK+ K+PIVV +C GF VNR+ FPY L+ G D
Sbjct: 464 VIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++ P DP+ + ++ + ++ + +++++DIV + P+
Sbjct: 584 KNGKGFYAYETDKRGKPKKVTDPQAYEVLKP------IVVEQR--EVTDEDIVNFMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|152985884|ref|YP_001347517.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas aeruginosa PA7]
gi|166971631|sp|A6V382.1|FADB_PSEA7 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|150961042|gb|ABR83067.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas aeruginosa
PA7]
Length = 715
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 263/513 (51%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA-------LDILEHRRPWVATLYKTDKI 56
+ K K E+A +G VDAVVAP QL + A A LD R+P + L K + I
Sbjct: 170 SGKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK A+LG G+MG GIA L P+++K
Sbjct: 286 VAQSLIGLFLNDQELKKKAKKYDE--VAKDVKLAAVLGAGIMGGGIAYQSALKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T K + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E I+ASNTSTI ++L+ + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +T I + KK+ K+PIVV +C GF VNR+ FPY L+ G D
Sbjct: 464 VIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLGFGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++ P DP+ + ++ + ++ + +++++DIV + P+
Sbjct: 584 KNGKGFYAYETDKRGKPKKVTDPQAYEVLKP------IVVEQR--EVTDEDIVNFMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|403270077|ref|XP_003927023.1| PREDICTED: peroxisomal bifunctional enzyme isoform 1 [Saimiri
boliviensis boliviensis]
Length = 723
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 168/547 (30%), Positives = 269/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
++ T + + EA LG++D VV + L + A++ + LE RR + I
Sbjct: 151 LITTGRYILAGEALKLGILDKVVNSDPLEEAIRFAQRVSDQPLESRRLF------NKPIP 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + RKQ P C+ V+A V G +KE E FQ LL+S
Sbjct: 205 SLPNMDTIFSEALLKMRKQHPGCLAQEACVRAVQAAVQYPYEVGSKKEEELFQYLLQSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + F A+R +K G + + + + V ++G G MG GI + + PVI
Sbjct: 265 ARALQYAFLAERKANKWSSPSGASWKTASAQPISSVGVVGLGTMGRGIVISFARAGIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 325 AVDSDKNQLATANKIITSVLEKEASKMQQSGHAWSGPKPRLTSSM--KELGGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++SLK+Q+FA+L C P L +NTS +D++ + T ++G HFFSPAH+M L
Sbjct: 383 FEDMSLKKQVFAELSAVCKPEAFLCTNTSALDVDELASSTSRPHLVIGTHFFSPAHIMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY + L+E G+
Sbjct: 443 LEVIPSRYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG MGPFR++DL G V TG P R + IP
Sbjct: 503 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + F+ + R I+P+ +S +
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYRETH--HIEPRI--ISRDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EGIA +D+ + G G+P +R + + +
Sbjct: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHRGGPMFYASTVGLPTVLEK 678
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 679 LQKYYRQ 685
>gi|114046979|ref|YP_737529.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella sp. MR-7]
gi|123131550|sp|Q0HWN3.1|FADJ_SHESR RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|113888421|gb|ABI42472.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Shewanella sp. MR-7]
Length = 709
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 177/510 (34%), Positives = 263/510 (51%), Gaps = 21/510 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL +P +L +E G
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRTAKPVKKSLV-NQLLEGTG 223
Query: 61 EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I + A+ A+K N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQAAKQVAKKTQGNYPAPAKIIDCVRQGMAKGMQKGLEVEASHFAELVVSKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G PR+VKK ILGGGLMG GIA+ + P +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+NEK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 342 INEKGLSNALSYAYKLLDKGVKRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ + I + + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSIEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKIAPILETELGERFKAPAAFDKLLSDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-----AIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y KAS KK +++ S+ GV ID + + ++E+ +V+M+ N
Sbjct: 582 KGFYQYAAGNKASSK---KKVVDE--SVYGVLGIKPGIDKEMSAVAERCVVQML-----N 631
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPY 502
EA R +GI D DI ++ G+GFPP+
Sbjct: 632 EAVRCLDDGIIASPRDGDIGAIFGIGFPPF 661
>gi|336449981|ref|ZP_08620438.1| fatty oxidation complex, alpha subunit FadJ [Idiomarina sp. A28L]
gi|336283138|gb|EGN76345.1| fatty oxidation complex, alpha subunit FadJ [Idiomarina sp. A28L]
Length = 709
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 173/507 (34%), Positives = 266/507 (52%), Gaps = 19/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT K ++ ++A +GL D +V + L+ A + AL + L+ PL
Sbjct: 169 LMLTGKQLRAKQALKMGLADEMVPQSILLEAAVEQALKGKRKAKKPKLNLFSKVLEGPLS 228
Query: 61 EAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
++K AR QA+K+A +P + ID V G+ G +AGL EA+ F +L S+
Sbjct: 229 SI--LYKKAREQAQKKAHG-NYPAIDKIIDTVAQGMNKGMKAGLAYEAKQFGELAMSDVS 285
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
L +IFFA K G G+ P VKK +LGGGLMG GIA I + PV LK+
Sbjct: 286 YQLRNIFFATTEIKKETGAD--GVKPEAVKKAGVLGGGLMGGGIAHVTISKAKVPVRLKD 343
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N++ ++ + L +VK+ + + ++ + +LTG +DY FKD D+VIEA+ E+
Sbjct: 344 INQEGIKNALAYHHKLLLPKVKRKIIRPTELQQQMLMLTGTVDYSGFKDTDIVIEAVFED 403
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ LKQ++ AD+EK H I A+NTS++ + I + ++++G H+FSP MPL EI
Sbjct: 404 LDLKQKMVADIEKNAAEHTIFATNTSSLPITQIAAKAARPEQVIGLHYFSPVEKMPLAEI 463
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS + I ++ K+ KTP+VV + GF VNR+ PY A L+ G + ++
Sbjct: 464 ITHEGTSKETIATTVEFAKRQGKTPVVVKDGAGFYVNRILAPYMNEAARLLLAGEPIEVL 523
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+ KFG P+GP L D VG VA + ER + +D R G ++
Sbjct: 524 DKTFVKFGFPVGPITLLDEVGIDVAGKVAPILTDALGERFRAPNAFNKLLDDGRKGRKSK 583
Query: 418 KGFYLYDERRKASP-DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
KGFYLYD ++K D V + I I P A L+ +++E P++NEA
Sbjct: 584 KGFYLYDGKKKGKHVDSSVYQVI---------GISPS-ASLAADEMIERCVLPMLNEAAW 633
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ I D DI ++ G+GFPP+R
Sbjct: 634 CLQDDIIRSPRDGDIGAIFGIGFPPFR 660
>gi|260772456|ref|ZP_05881372.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
metschnikovii CIP 69.14]
gi|260611595|gb|EEX36798.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
metschnikovii CIP 69.14]
Length = 708
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 164/505 (32%), Positives = 272/505 (53%), Gaps = 16/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++LT K ++ ++A+ LG+VDA V + L+ A ++ D + RR +L K + G
Sbjct: 168 LILTGKQLRAKKAYKLGVVDACVPQSVLLEVALRFVGDNSKKRRQAKPSL-KEKLLANTG 226
Query: 61 EAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R+I ++ +Q +P ++V+E G+ G +AGL++EA+ F +L+ +
Sbjct: 227 LGRKIIFDQASKKTEQKTRGNYPAAKAILEVIEHGLNKGLKAGLEQEAKRFGELVMTNES 286
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
K+L IFFA K G P+ VK V++LGGGLMG+GI+ ++ + PV +K+
Sbjct: 287 KALRSIFFATTEMKKEHGSD---AEPKPVKHVSVLGGGLMGAGISHVSVAKAKLPVRIKD 343
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
V+ + + + + K+ +++ + + ++ L G D+ F+ D+VIEA+ E+
Sbjct: 344 VSNDGILNALSYNYGLFEKQRKRKIISKAQLQNSMMQLAGGTDFRGFQQTDVVIEAVFED 403
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQQ+ AD+E++ P I A+NTS++ + I E+ + IVG H+FSP MPL+E+
Sbjct: 404 LALKQQMVADVEQHAQPSTIFATNTSSLPIGQIAEKATRPENIVGLHYFSPVEKMPLVEV 463
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ + TSP+ I ++ + KK KTPIVV + GF VNR+ PY A ++ G + I
Sbjct: 464 IPHSTTSPETIATVVALAKKQGKTPIVVKDRAGFYVNRILAPYMNEAANVLMAGETIEKI 523
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ FG P+GP L D VG V + R + ++ D R G T
Sbjct: 524 DKALLNFGFPVGPITLLDEVGIDVGSKIMPILVNELGPRFKGPDVFEVLLNDNRKGRKTG 583
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
KGFY Y + K EV K + K +++ P+ +K E++I P++NEA R
Sbjct: 584 KGFYSYKKGSKKK---EVDKSVYKLLNLT-----PE-SKWDEQEIAMRCVLPMLNEAVRC 634
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EGI D DI ++ G+GFPP+
Sbjct: 635 LDEGIIHSPRDGDIGAIFGIGFPPF 659
>gi|315126130|ref|YP_004068133.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudoalteromonas sp. SM9913]
gi|315014644|gb|ADT67982.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudoalteromonas sp. SM9913]
Length = 730
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 169/508 (33%), Positives = 262/508 (51%), Gaps = 27/508 (5%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
MLT K ++ ++A G++D V + L+ A+++A ++P A K DKI L E
Sbjct: 166 MLTGKQIRPKQAKKAGVLDDCVPQSVLLKVAKEFA----AKKKPQ-AKEPKLDKISKLLE 220
Query: 62 ARE-----IFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
+ IFK A+ +K + P+ I V A V + EAE F L+ S
Sbjct: 221 SNPFGRNFIFKKAKENVLKKTGGHYPAPLAIIKAVRASVELDEMKAYKTEAEGFATLVMS 280
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
+ K+L IFFA K D AP + K A+LGGGLMG+GIA + + + PV
Sbjct: 281 DESKALRGIFFATTEMKKEWRNDD---APA-ISKTAVLGGGLMGAGIAHVSAVKAKLPVR 336
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+V E+ + + L R+K+ M++ + T++ +TG DY FK +D+VIEA+
Sbjct: 337 IKDVAEQGISNAMNYTYKILDKRLKRRIMSKADMQLTMNRITGTTDYSGFKHIDLVIEAV 396
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++ LKQ + AD+E++C + I ASNTS++ ++ I + + ++G H+FSP MPL
Sbjct: 397 FEDLELKQGMVADVEQHCQANTIFASNTSSLPISQIAAKAARPENVIGLHYFSPVEKMPL 456
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+ TS + I +++ +K KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 457 VEIIPHEGTSKETIARVVNFARKQGKTPIVVKDMAGFYVNRILAPYLNEAANLMLAGEPI 516
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID A+ +FG P+GP L D VG + + ER M + KR G
Sbjct: 517 EKIDAALVEFGFPVGPLALLDEVGIDIGSKIAPILEKELGERFKGPDAFSRMIDSKRLGR 576
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T +GFY YD++ KK E + GV P +L++ +I + ++NEA
Sbjct: 577 KTGRGFYEYDKKG--------KKVDESVYELLGVTPAP---RLNKNEIAKRCISQMLNEA 625
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPY 502
R +GI D DI ++ G+GFPP+
Sbjct: 626 VRCLDDGIIASPRDGDIGAIFGIGFPPF 653
>gi|229589076|ref|YP_002871195.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas fluorescens SBW25]
gi|259646366|sp|C3K613.1|FADB_PSEFS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|229360942|emb|CAY47802.1| fatty oxidation complex alpha subunit [Pseudomonas fluorescens
SBW25]
Length = 715
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 256/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP++L A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D R VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IARDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEAQVKDDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I + E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ V + + ++S++DI+ + +
Sbjct: 584 KNGKGFYAYEADKKGKQKKVADPSVHEV------LAPVIYEQR--EVSDEDIINWMMIAL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|398896731|ref|ZP_10647755.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM55]
gi|398177995|gb|EJM65655.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM55]
Length = 715
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 254/506 (50%), Gaps = 27/506 (5%)
Query: 11 EEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKIEPLGEAR 63
E+A +G VDAVVAP QL A + D R+P + L K + IE +
Sbjct: 177 EDALKVGAVDAVVAPEQLQDAALELIKRAISGEFDYKAKRQPKLEKL-KLNAIEQMMAFE 235
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F QA PN P+ I ++ G L+ EA F KL ++ +SL+
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K D + VK+ A+LG G+MG GIA P+++K++NE +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++EN +KQ
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAEVEDQVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S + + KK+ K PIVV +C GF VNR+ FPY LV G D ID+ + K
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG E FP+R + + ++ E KR G+ KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFY 590
Query: 422 LYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y+ +K DP V + ++ I + +++++DI+ + P+ E R
Sbjct: 591 AYETDKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMMIPLCLETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
+GI AA+ D+ V G+GFPP+R
Sbjct: 643 LEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|398952502|ref|ZP_10674814.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM33]
gi|398155037|gb|EJM43494.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM33]
Length = 715
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 255/506 (50%), Gaps = 27/506 (5%)
Query: 11 EEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
E+A +G VDAVVAP +L+ A D R+P + L K + IE +
Sbjct: 177 EDALKVGAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKL-KLNAIEQMMAFE 235
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F QA PN P+ I ++ G L+ EA F KL ++ +SLV
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLVG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K D + VK+ A+LG G+MG GIA P+++K++NE +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ L RV+KG+MT K + ++ + L Y F VD+V+EA++EN +KQ
Sbjct: 351 EQGLAEAAKLLVGRVEKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAEVEDQVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S + + KK+ K PIVV +C GF VNR+ FPY LV G D ID+ + K
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG E FP+R + + ++ E KR G+ KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFY 590
Query: 422 LYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y+ +K DP V + ++ I + +++++DI+ + P+ E R
Sbjct: 591 AYETDKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMMIPLCLETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
+GI AA+ D+ V G+GFPP+R
Sbjct: 643 LEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|403270079|ref|XP_003927024.1| PREDICTED: peroxisomal bifunctional enzyme isoform 2 [Saimiri
boliviensis boliviensis]
Length = 698
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 169/547 (30%), Positives = 270/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
++ T + + EA LG++D VV + L + A++ + LE RR L+ I
Sbjct: 126 LITTGRYILAGEALKLGILDKVVNSDPLEEAIRFAQRVSDQPLESRR-----LF-NKPIP 179
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + RKQ P C+ V+A V G +KE E FQ LL+S
Sbjct: 180 SLPNMDTIFSEALLKMRKQHPGCLAQEACVRAVQAAVQYPYEVGSKKEEELFQYLLQSGQ 239
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + F A+R +K G + + + + V ++G G MG GI + + PVI
Sbjct: 240 ARALQYAFLAERKANKWSSPSGASWKTASAQPISSVGVVGLGTMGRGIVISFARAGIPVI 299
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 300 AVDSDKNQLATANKIITSVLEKEASKMQQSGHAWSGPKPRLTSSM--KELGGVDLVIEAV 357
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++SLK+Q+FA+L C P L +NTS +D++ + T ++G HFFSPAH+M L
Sbjct: 358 FEDMSLKKQVFAELSAVCKPEAFLCTNTSALDVDELASSTSRPHLVIGTHFFSPAHIMKL 417
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY + L+E G+
Sbjct: 418 LEVIPSRYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKP 477
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG MGPFR++DL G V TG P R + IP
Sbjct: 478 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRYCPIP 537
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + F+ + R I+P+ +S +
Sbjct: 538 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYRETH--HIEPRI--ISRDE 593
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EGIA +D+ + G G+P +R + + +
Sbjct: 594 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHRGGPMFYASTVGLPTVLEK 653
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 654 LQKYYRQ 660
>gi|395798510|ref|ZP_10477794.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. Ag1]
gi|421143610|ref|ZP_15603549.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas
fluorescens BBc6R8]
gi|395337245|gb|EJF69102.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. Ag1]
gi|404505301|gb|EKA19332.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas
fluorescens BBc6R8]
Length = 715
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 255/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP++L A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D R VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IARDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEAQVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I + E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ V + + ++S++DIV + +
Sbjct: 584 KNGKGFYAYETDKKGKQKKVADPSVHEV------LAPVIYEQR--EVSDEDIVNWMMIAL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|392543867|ref|ZP_10291004.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudoalteromonas piscicida JCM 20779]
Length = 700
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 171/504 (33%), Positives = 258/504 (51%), Gaps = 18/504 (3%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALD-ILEHRRPWVATLYKTDKIEPLG 60
MLT K V+ ++A GLVD V + L+ A + A + R+P + + + + P G
Sbjct: 164 MLTGKQVRPKQAKKAGLVDDSVPHSILLDVAVKLARKGKPKPRKPNLDKISQLLESNPFG 223
Query: 61 EAREIFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
IFK A+ +K + P+ I V A V G + EAE F L+ SE +
Sbjct: 224 R-NIIFKKAQENVEKKTGGHYPAPLAIIKAVRASVELDKLKGYKTEAEGFADLVMSEVSR 282
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKEV 178
SL IFFA K DL AP VK+VA+LGGGLMG+GI + + + PV +K+V
Sbjct: 283 SLRGIFFATTEMKKDFQGEDL--AP--VKRVAVLGGGLMGAGITHVSAVKAGTPVRIKDV 338
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ + + L R K+ +++ + + T++++TG DY FK DMVIEA+ E++
Sbjct: 339 AHQGISNALNYSYKILTQRQKRRIISKAEMQSTLNMITGTTDYSGFKHTDMVIEAVFEDL 398
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
LKQ + AD+E+ C I ASNTS++ + I + + ++G H+FSP MPL+EI+
Sbjct: 399 DLKQSMVADIERECSESTIFASNTSSLPIGQIAAKATRPENVIGLHYFSPVEKMPLVEII 458
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
TS +VI + +K KTPIVV + GF VNR+ PY A L+ G + ID
Sbjct: 459 PHETTSDEVIARTVAFARKQGKTPIVVKDKAGFYVNRILAPYVNEAVNLLLAGEPIEKID 518
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+A+ +FG P+GP L D VG + + R M + KR G + +
Sbjct: 519 QALVEFGFPVGPLALLDEVGVDIGSKIAPILEKELGTRFKAPDAFARMIDSKRLGRKSGR 578
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY Y+ ++ D V + + GV P KL++++I ++NEA R
Sbjct: 579 GFYAYEGKKGKQVDESVYELL-------GVTPSP---KLNKQEIANRCVAQMLNEAARCL 628
Query: 479 AEGIAVKAADLDIASVMGMGFPPY 502
EGI A D DI ++ G+GFPP+
Sbjct: 629 DEGIIRNARDGDIGAIFGIGFPPF 652
>gi|395499910|ref|ZP_10431489.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. PAMC 25886]
Length = 715
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 255/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP++L A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D R VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IARDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEAQVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I + E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ V + + ++S++DIV + +
Sbjct: 584 KNGKGFYAYEADKKGKQKKVADPSVHEV------LAPVIYEQR--EVSDEDIVNWMMIAL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|452045|gb|AAA53289.1| enyol-CoA: hydratase/3-hydroxyacyl-CoA dehydrogenase [Homo sapiens]
Length = 723
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 165/517 (31%), Positives = 262/517 (50%), Gaps = 31/517 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D VV + + + A++ + LE RR I+
Sbjct: 151 LITSGRRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRR------LCNKPIQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + R+Q P C+ V+A V G++KE E F LL+S
Sbjct: 205 SLPNMDSIFSEALLKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + FFA+R +K G + + R V V ++G G MG GI + + PVI
Sbjct: 265 ARALQYAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 325 GVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E +SLK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 383 FEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY A+ L+E G+
Sbjct: 443 LEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG MGPFR++DL G V TG + P R + IP
Sbjct: 503 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLLPGTPARKRGNRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDE--RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + F+ + R I+P+ +S+ +
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSRYRKPH--HIEPR--TISQDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMG 498
I+E + ++NEA R+ EGIA +D+ + G G
Sbjct: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYG 655
>gi|66046519|ref|YP_236360.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. syringae B728a]
gi|81308083|sp|Q4ZRA0.1|FADB_PSEU2 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|63257226|gb|AAY38322.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Pseudomonas syringae pv. syringae B728a]
Length = 721
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 265/521 (50%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP +L + A D R+P K DK+
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G + + VK+ A+LG G+MG GIA + P
Sbjct: 283 KTPAAQSLIGLFLNDQELKKKARGYDKIA---KDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + I + + K
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAK 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
V + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 VNWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|398900312|ref|ZP_10649369.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM50]
gi|398181211|gb|EJM68781.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM50]
Length = 715
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 168/513 (32%), Positives = 257/513 (50%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA-------LDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP +L+ A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPEKLLEAALNLVKGAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEATGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAKEVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + ++ E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMQDDRRSAVDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDE----RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++K DP V + ++ + + + ++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKQKKVADPSVLEVLKP------IVFEQR--DVTDEDIINWMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|398872180|ref|ZP_10627483.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM74]
gi|398204052|gb|EJM90863.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM74]
Length = 715
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 256/506 (50%), Gaps = 27/506 (5%)
Query: 11 EEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKIEPLGEAR 63
E+A +G VDAVVAP QL + A + D R+P + L K + IE +
Sbjct: 177 EDALKVGAVDAVVAPEQLQNAALELIKRAISGEFDYKAKRQPKLEKL-KLNAIEQMMAFE 235
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F QA PN P+ I ++ G L+ EA F KL ++ +SL+
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLIG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K D + VK+ A+LG G+MG GIA P+++K++NE +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++EN +KQ
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S + + KK+ K PIVV +C GF VNR+ FPY LV G D ID+ + K
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG E FP+R + + ++ E KR G+ KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFY 590
Query: 422 LYDE----RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y+ ++K DP V + ++ I + +++++DI+ + P+ E R
Sbjct: 591 AYETDKRGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMMIPLCLETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
+GI AA+ D+ V G+GFPP+R
Sbjct: 643 LEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|443718591|gb|ELU09144.1| hypothetical protein CAPTEDRAFT_144302 [Capitella teleta]
Length = 713
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 172/559 (30%), Positives = 277/559 (49%), Gaps = 49/559 (8%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVV---APNQLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +A LG+VD VV A + V A+ A + L RR T +
Sbjct: 144 LIPSGRHIGAAQAFKLGIVDKVVRGDAVEEAVKFAKSIAGEPLVDRR--------TSQRP 195
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+G A A K+ + PIVC+ V G + G+Q EA + + S
Sbjct: 196 VMGAENAFLAAAVKLAMKKKKGMIAPIVCLSVSFMGSLLPFEQGIQVEAAEAVVVFTSGQ 255
Query: 118 CKSLVHIFFAQRGTSK--VP-GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
+L + FFAQR K +P G + + R ++ A++G G MG+GI A++ + PV
Sbjct: 256 MGALQYAFFAQRAAPKWLLPCGASFKTVKGRPIRNAAVIGAGTMGTGITMAMLNAGIPVT 315
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
L E + KFL+ G+ ++ V K+TQ++ + +S L + Y+S +VD+VIEA+
Sbjct: 316 LVEQDRKFLDKGVSLLKLLYAGSVSLRKITQDQCDAILSKLNTAVGYKSLTNVDLVIEAV 375
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
EN++LK+QIFA+L++ CPP L +NTS +D++ I T D+++G HFF PA+ M L
Sbjct: 376 YENMALKKQIFAELDRICPPETFLWTNTSALDIDEIASATRRPDKVLGTHFFVPAYHMKL 435
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE VR TS + + G +I K P+VVGNC GF NRM Y A L+E G
Sbjct: 436 LENVRGKLTSAETVASAQMFGTRIGKIPVVVGNCHGFVGNRMLHKYVYEADFLIEEGCWP 495
Query: 355 YLIDRAITKFGMPMGPFRLADLVGF--------------GVAIATGMQFIENFPERTYKS 400
+D FG+P+GPF++ DL G G+ I +F+ ER S
Sbjct: 496 EDVDMVAENFGLPLGPFKVRDLSGLDIRVRGLLEQAKAAGIEINPATRFLNG--ERI--S 551
Query: 401 MIIPIMQEDKRAGETTRKGFYLYDERRKASP--DPEVKKFIEKARSMSGVAIDPKFAKLS 458
++ + + G T +GFY Y + P D +K I + + G+ + K++
Sbjct: 552 LLSKSLVDKGHCGRKTGRGFYNYGKPGGKIPLNDRFIKDVIVEYCAERGI----ERRKVA 607
Query: 459 EKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFP-----PYRFVTFIHRGFS 513
++I E +F P++NE ++ EGIA K D+D ++G +P P + + G
Sbjct: 608 YQEIEERLFLPLINEGFKILEEGIASKPEDIDTIWLLGYAWPRHTGGPMYYANMV--GLD 665
Query: 514 KSSSCFKNLLCYFDQGRNH 532
K N +C++++ H
Sbjct: 666 K----IYNRICHYNELHKH 680
>gi|422674313|ref|ZP_16733667.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. aceris str. M302273]
gi|330972041|gb|EGH72107.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. aceris str. M302273]
Length = 721
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 265/521 (50%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP +L + A D R+P K DK+
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G + + VK+ A+LG G+MG GIA + P
Sbjct: 283 KTPAAQSLIGLFLNDQELKKKAKGYDKIA---KDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + I + + K
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAK 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
V + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 VNWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|398975662|ref|ZP_10685737.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM25]
gi|398140107|gb|EJM29085.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM25]
Length = 715
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 255/506 (50%), Gaps = 27/506 (5%)
Query: 11 EEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
E+A +G VDAVVAP +L+ A D R+P + L K + IE +
Sbjct: 177 EDALKVGAVDAVVAPEKLQDAALELIKRAVSGEFDYKAKRQPKLEKL-KLNAIEQMMAFE 235
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F QA PN P+ I ++ G L+ EA F KL ++ +SL+
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K D + VK+ A+LG G+MG GIA P+++K++NE +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++EN +KQ
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S I + KK+ K PIVV +C GF VNR+ FPY LV G D ID+ + K
Sbjct: 471 SELAIATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG E FP+R + I ++ E KR G+ KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFY 590
Query: 422 LYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y+ +K DP V + ++ I + +++++DI+ + P+ E R
Sbjct: 591 AYEADKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMMIPLCLETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
+GI AA+ D+ V G+GFPP+R
Sbjct: 643 LEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|326796137|ref|YP_004313957.1| fatty oxidation complex, subunit alpha FadB [Marinomonas
mediterranea MMB-1]
gi|326546901|gb|ADZ92121.1| fatty oxidation complex, alpha subunit FadB [Marinomonas
mediterranea MMB-1]
Length = 719
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 160/507 (31%), Positives = 259/507 (51%), Gaps = 24/507 (4%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKIEPLGE 61
+ E+A G VDAVV ++V++AR LD++ R A + + IE +
Sbjct: 175 RSEDALKDGAVDAVVPVEKVVTSARHLIQHVIDGKLDVMARREELRAPMVFS-PIEKMMV 233
Query: 62 AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSL 121
+ A+A K P P+ I +E V + E + F K+ ++ KSL
Sbjct: 234 FESVRGVVGAKAGKHYP---APMAAIKTMEKNVSQTIEKACETEIKGFVKVAKTPVAKSL 290
Query: 122 VHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEK 181
V++F + K G G P VK+ A+LG G+MG G+A P+I+K++ +
Sbjct: 291 VNLFLNDQYVKKAAGTFSKGADP--VKQAAVLGAGIMGGGVAYQSASKGTPIIMKDIRSE 348
Query: 182 FLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLK 241
L+ G+ +V++G++T EK K ++ + L Y F+ VD+V+EA++ENV++K
Sbjct: 349 ALDLGLSEANKLFGKQVERGRLTNEKSMKALNSIVPALSYGEFEGVDLVVEAVVENVNVK 408
Query: 242 QQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTN 301
+ + A+ E + +LASNTSTI + + + + G HFF+P H MPL+E++R
Sbjct: 409 KSVLAETENHIRDDAVLASNTSTISITELSKALKRPENFCGMHFFNPVHRMPLVEVIRGE 468
Query: 302 QTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAI 361
++S + + + + + KTPIVV +C GF VNR+ FPY L+++ G D ID+ +
Sbjct: 469 KSSDEAVAKTVAYAQAMGKTPIVVNDCPGFLVNRVLFPYFAGFSLMMKEGADFQKIDKVM 528
Query: 362 TKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGETTRKG 419
+FG PMGP L D+VG A + FP+R I + E +R G+ KG
Sbjct: 529 ERFGWPMGPAYLIDVVGIDTAYHADQVMADGFPDRMTHDGKNAIDKLFEVERFGQKNEKG 588
Query: 420 FYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
FY Y++ RK P DPE+ + + +G +LS++DI+ + P+ E
Sbjct: 589 FYRYEQDRKGKPKKIYDPEITTLLAETVDAAGTN-----GELSDEDIIARMMIPLCIETV 643
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
R EGI A+ D+ + G+GFPPY
Sbjct: 644 RCVEEGIVSSPAEADMGLIYGIGFPPY 670
>gi|388470330|ref|ZP_10144539.1| fatty oxidation complex, alpha subunit [Pseudomonas synxantha
BG33R]
gi|408483045|ref|ZP_11189264.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. R81]
gi|388007027|gb|EIK68293.1| fatty oxidation complex, alpha subunit [Pseudomonas synxantha
BG33R]
Length = 715
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 256/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKI 56
K K E+A +G VDAVVAP++L A D R+P + L K + I
Sbjct: 170 AGKENKAEDALKVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEAQVKDDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I + E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ V + + ++S++DI+ + +
Sbjct: 584 KNGKGFYAYEADKKGKQKKVADPSVHEV------LAPVIYEQR--EVSDEDIINWMMIAL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|121596028|ref|YP_987924.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. JS42]
gi|120608108|gb|ABM43848.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Acidovorax
sp. JS42]
Length = 705
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 167/508 (32%), Positives = 256/508 (50%), Gaps = 17/508 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEH----RRPWVATLYKTDKI 56
+ML+ K + + A + GLVD +V V+ +A ++L RR + KI
Sbjct: 157 LMLSGKHLSAKAAAAAGLVDRLVEGTDPVAAGLAYANELLAQGAQPRR------TRDLKI 210
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
A + K+ L P ++ V A V G+ KE F + L S
Sbjct: 211 ADQAAALAELDALALETAKKTRGLFSPGKIVECVRAAVELPFDEGIAKERALFVECLNSP 270
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+ LVH FFA+R T+K+P APR K+AI+GGG MG+GI A + + V +
Sbjct: 271 QRQGLVHAFFAERETAKIPEAQ--AAAPRHFAKIAIIGGGTMGAGITVAALDAGLTVTMI 328
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E + + + G V + KG+MT E ++ T Y+ DVD+VIEA+ E
Sbjct: 329 ERDAESIARGQKNVEKVYDGLIAKGRMTAEGKAAILARYTPSTRYDDIADVDLVIEAVFE 388
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++ +K+ +F +L++ C P +LA+NTS +D++ I T ++G HFFSPA++M LLE
Sbjct: 389 DLEVKKAVFKELDRVCKPGAVLATNTSYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLE 448
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
IV + +P V+ + KK+KK P+ G C GF NR+ Y QAA L+E G Y
Sbjct: 449 IVVPAKVAPDVVTTAFALAKKMKKVPVRAGVCDGFIGNRILAVYKQAADYLMEDGASPYE 508
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
ID A+ FG MGPF++ DL G + AT + + + + E G+ T
Sbjct: 509 IDEAVRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPQARYVEVADRVCERGWFGQKT 568
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
+GFYLY + R PDPEV ++ R+ G I P+ + + +I+ +VNE
Sbjct: 569 GRGFYLYPQGARVGQPDPEVLAIVDAERAKKG--ITPR--QFTADEIMRRYMAAMVNEGA 624
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
+V EGIA++ D+D+ + G GFP +R
Sbjct: 625 KVVQEGIALRPLDVDVTFLSGYGFPRWR 652
>gi|333908563|ref|YP_004482149.1| fatty oxidation complex subunit alpha FadB [Marinomonas posidonica
IVIA-Po-181]
gi|333478569|gb|AEF55230.1| fatty oxidation complex, alpha subunit FadB [Marinomonas posidonica
IVIA-Po-181]
Length = 716
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 160/495 (32%), Positives = 258/495 (52%), Gaps = 19/495 (3%)
Query: 17 GLVDAVVAPNQLVSTARQWALDILEHRRPWVA---TLYKTDKIEPLGEAREIFKFAR--- 70
G VDAVVA +++ ++AR ++E + + A L + P+ E IF+ R
Sbjct: 183 GAVDAVVAADKVQASARHLVQQVIEGKLDYKARRDELRAPMEFTPI-EKMMIFESVRGVV 241
Query: 71 -AQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQR 129
A+A K P P+ I +E G+ L+ E + F KL + KSLV +F + +
Sbjct: 242 GAKAGKHYP---APMAAIKTIEKGISQSMEKALEIEIKGFIKLAKGPVAKSLVTLFLSDQ 298
Query: 130 GTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGR 189
KV G P VK+ A+LG G+MG G+A P+I+K++ + L+ G+
Sbjct: 299 AIKKVAGKVSKHATP--VKQAAVLGAGIMGGGVAYQSASKGTPIIMKDIRQDALDLGLSE 356
Query: 190 VRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLE 249
+V++G++T +K K ++ + L Y F+ VD+V+EA++ENV++K+ + A++E
Sbjct: 357 ANKLFNGQVERGRLTADKAFKAMNGIVPALSYGEFEQVDLVVEAVVENVNIKKSVLAEVE 416
Query: 250 KYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIV 309
IL SNTSTI + + + + G HFF+P H MPL+E++R +TS + I
Sbjct: 417 SKITDEAILTSNTSTISITELAKDLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDKAIA 476
Query: 310 DLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMG 369
+ + + KTP+VV +C GF VNR+ FPY L+++ G D ++D+ + +FG PMG
Sbjct: 477 QTVAYAQAMGKTPVVVNDCPGFLVNRVLFPYFAGFSLMMQEGADFQVVDKTMERFGWPMG 536
Query: 370 PFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGETTRKGFYLYDERR 427
P L D+VG A E FP+R + + E +R G+ KGFY Y+ R
Sbjct: 537 PAYLLDVVGVDTAFHADQVMAEGFPDRMKHDGKNAVDRLFELERFGQKNSKGFYTYEPDR 596
Query: 428 KASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAA 487
K P K F + ++ + K +L+E+DI+ + P+ E R E I AA
Sbjct: 597 KGKPK---KIFNDDINALLAPIVASK-TELTEEDIIARMMIPLCIETVRCVEENIVSSAA 652
Query: 488 DLDIASVMGMGFPPY 502
+ D+ + G+GFPPY
Sbjct: 653 EADMGLIYGIGFPPY 667
>gi|442611701|ref|ZP_21026404.1| Enoyl-CoA hydratase [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441746446|emb|CCQ12466.1| Enoyl-CoA hydratase [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 698
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 174/522 (33%), Positives = 263/522 (50%), Gaps = 22/522 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALD-ILEHRRPWVATLYKTDKIEPLG 60
MLT K V ++A GLVD V + L+ A + A + R+P + L + + P G
Sbjct: 164 MLTGKQVFAKQAKKAGLVDDTVPQSILLDVAVRLARGGKPKPRKPMLDKLSQLLESNPFG 223
Query: 61 EAREIFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
IFK A K + P+ I V A V + EAE F L+ S+ K
Sbjct: 224 R-HIIFKKAEENVLSKTGGHYPAPLAIIKAVRASVELDELKAYKTEAEGFADLVMSDVSK 282
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKEV 178
SL IFFA T+++ AP+ +VA+LGGGLMG+GIA + + + PV +K+V
Sbjct: 283 SLRGIFFA---TTEMKKEWKSAEAPK-TARVAVLGGGLMGAGIAHVSAVKAGVPVRIKDV 338
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ + + L R K+ M++ + + ++ +TG +DY FK +D+VIEA+ E++
Sbjct: 339 AHQGISNALNYSYKILSKRQKRKIMSKAELQLAMNRITGAIDYSGFKHMDLVIEAVFEDL 398
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
LKQ + AD+EK C H I ASNTS++ + I + + ++G H+FSP MPL+EI+
Sbjct: 399 KLKQSMVADIEKECGEHTIFASNTSSLPIAQIAQEATRPENVIGLHYFSPVEKMPLVEII 458
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
TS + I ++ +K KTPIVV + GF VNR+ PY A L+ G + ID
Sbjct: 459 PHEGTSEETIARTVEFARKQGKTPIVVKDKAGFYVNRILAPYVNEAANLLLAGEPIEKID 518
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ +FG P+GP L D VG + + ER + + KR G T +
Sbjct: 519 AALVEFGFPVGPLALLDEVGIDIGSKIAPILEKELGERFKAPDAFSRLIDAKRLGRKTGR 578
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY Y++ KK E + GV++ P +L++++I ++NEA R
Sbjct: 579 GFYKYEQNG--------KKVDESVYELLGVSVSP---RLNKQEIANRCVAQMLNEAARCL 627
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR---FVTFIHRGFSKSSS 517
EGI A D DI ++ G+GFPP+ F RG +K S
Sbjct: 628 DEGIIASARDGDIGAIFGIGFPPFLGGPFSYMDKRGINKVCS 669
>gi|395648372|ref|ZP_10436222.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 715
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 253/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKI 56
K K E+A +G VDAVVAP +L A D R+P + L K + I
Sbjct: 170 AGKENKAEDALKVGAVDAVVAPEKLAEAALNLIKGAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPLEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--VAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEAQVKDDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S I + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAIATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I + E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAIDALYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + + I + ++S++DI+ + +
Sbjct: 584 KNGKGFYAYETDKKGKQKKVADPSVHEVL--------APIIYEQREVSDEDIINWMMIAL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|387892777|ref|YP_006323074.1| fatty oxidation complex subunit alpha [Pseudomonas fluorescens
A506]
gi|387163990|gb|AFJ59189.1| fatty oxidation complex, alpha subunit [Pseudomonas fluorescens
A506]
Length = 715
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 256/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKI 56
K K E+A +G VDAVVAP++L A D R+P + L K + I
Sbjct: 170 AGKENKAEDALKVGAVDAVVAPDKLAEAALSLIKGAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEAQVKDDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I + E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ V + + ++S++DI+ + +
Sbjct: 584 KNGKGFYAYEADKKGKQKKVADPSVHEV------LAPVIYEQR--EVSDEDIINWMMIAL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|419955307|ref|ZP_14471437.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri TS44]
gi|387967934|gb|EIK52229.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri TS44]
Length = 715
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 259/513 (50%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A + VDAVVAP++L V A LD R+P + L K + I
Sbjct: 170 SGKENGAEDALKVHAVDAVVAPDKLQEAALDLVKRAISGELDYKAKRQPKLDKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETSKAFVAGQA---GPNYPAPVEAIKTIQKAASFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SLV +F + + K D R VK A+LG G+MG GIA + P+++K
Sbjct: 286 VAQSLVGLFLSDQELKKKAKAYDK--QARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T EK + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLDEASKLLGKRVEKGRLTPEKMAQALNAIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + A++E + I+ASNTSTI ++ + + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKHAVLAEVEGHVREDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS I + KK+ K+P+VV +C GF VNR+ FPY + G D
Sbjct: 464 VIRGEKTSETAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFAR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGE 414
D+ + KFG PMGP L D+VG E FP+R I +M E R G+
Sbjct: 524 ADKVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDGRTAIDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY+Y+ +K P DP+ + ++ I + +LS++DI+ + P+
Sbjct: 584 KNGKGFYVYEMDKKGKPKKVVDPQAYELLK--------PIVAETRELSDEDIINYMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|73538624|ref|YP_298991.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
gi|72121961|gb|AAZ64147.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
Length = 446
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 217/388 (55%), Gaps = 8/388 (2%)
Query: 115 SETCKSLVHIFFAQRGTSKVPGV-TDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
+E + ++ FAQ + +P DL L P V VA++G G MG GIA AL PV
Sbjct: 8 AEAQATADYVRFAQAEAAHIPDFPKDLPLRP--VNHVAVIGAGTMGGGIAMALANIGIPV 65
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
L + +EK LE G+ RVR N V +GK+ E +SL+ G DMVIEA
Sbjct: 66 TLIDSSEKGLETGLRRVRDNYAGSVSRGKLEPAAMETRLSLIKGSGALADAASADMVIEA 125
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
+ E+++LKQQ+F DL+ C P ILA+NTS +D++ I T +VGAHFFSPAHVM
Sbjct: 126 VFEDMALKQQVFRDLDARCKPGAILATNTSGLDVDAIAAVTKRPQDVVGAHFFSPAHVMR 185
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
LLE+VR T+P VI L+D+G+++ KT ++ GF N +F YT+ A LVE G
Sbjct: 186 LLEVVRARDTAPDVIATLMDLGRRMGKTAVLARVYPGFIGNALFRNYTREAHFLVEEGAL 245
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAG 413
+ +D+A+T FG MG F + D+ G V T I P+ + +I + E R G
Sbjct: 246 PHEVDQALTDFGYAMGIFAVHDMAGNDVGYQTRKAQIATRPQDRRWNDLILKLTELGRLG 305
Query: 414 ETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
+ + KG+Y Y+ R+ DPEV+ FIE+ + G+ P + ++I++ + +VN
Sbjct: 306 QKSGKGWYRYEPGSRQPLRDPEVETFIEQESARLGMVRRP----IDAEEIIKRCVYGMVN 361
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFP 500
E ++ G+A++ +D+D + G GFP
Sbjct: 362 EGAKLLEAGVALRPSDIDTVYLTGYGFP 389
>gi|114561201|ref|YP_748714.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella frigidimarina NCIMB 400]
gi|122301214|sp|Q08A39.1|FADB_SHEFN RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|114332494|gb|ABI69876.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Shewanella frigidimarina NCIMB 400]
Length = 716
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 260/516 (50%), Gaps = 24/516 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T+K + E+A +G +DAVVAP L + A Q D L W A K L +
Sbjct: 169 TAKDQRPEDALKVGAIDAVVAPENLEAAAIQMLHDALNGSLDWQARRTKKQSPLQLPKLE 228
Query: 64 EIFKFARAQ------ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ FA A+ A K P P+ ++VVE L+ EA F KL +++
Sbjct: 229 AMMSFATAKGMVFSVAGKHYP---APMAAVNVVEQAAGLDRDGALKVEALAFIKLAKTDV 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ IF + G + V + A+LG G+MG GIA P+++K+
Sbjct: 286 AQALIGIFLNDQFVKGK--AKKAGKLAKDVNQAAVLGAGIMGGGIAYQSASKGTPIVMKD 343
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + LE G+ L ++V +G+ T EK K ++ +T LDY + K+ D+V+EA++E+
Sbjct: 344 IAQPALELGLNEAAKILTTQVARGRSTPEKMAKVLNNITPSLDYAAIKNSDIVVEAVVEH 403
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+EI
Sbjct: 404 PKVKATVLAEVEGYVSEDAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEI 463
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D +
Sbjct: 464 IRGEHSSEETIATVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLAEGADFAAV 523
Query: 358 DRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRAGE 414
D+ + K FG PMGP L D+VG E FP+R K+ I IM E+KR G+
Sbjct: 524 DKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFENKRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKL---SEKDIVEMIFFPVV 471
KGFY Y R+ P KK I+ S + +F +L DI+ P++
Sbjct: 584 KNTKGFYAYSVDRRGKP----KKDIDPT---SYELLSAEFGELKAFESDDIIARCMIPMI 636
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI A+ D+ V G+GFPP+R F
Sbjct: 637 IETVRCLEEGIIASPAEGDMGLVYGIGFPPFRGGVF 672
>gi|237799446|ref|ZP_04587907.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022302|gb|EGI02359.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 721
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 260/518 (50%), Gaps = 37/518 (7%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP +L + A D R+P + L K + I
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F K+ ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKMAKTS 285
Query: 117 TCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
SL+ +F Q K G + R VK+ A+LG G+MG GIA + P+++
Sbjct: 286 AAHSLIGLFLNDQELKKKAKGYDKVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTPILM 342
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+EA++
Sbjct: 343 KDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVV 402
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+MPL+
Sbjct: 403 ENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLV 462
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++R ++S + + + +K+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 463 EVIRGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFV 522
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAG 413
ID+ + KFG PMGP L D+VG E FP+R + I + E R G
Sbjct: 523 RIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEANRLG 582
Query: 414 ETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDIVEM 465
+ KGFY Y+ +K P DP V K + + R ++S++DI+
Sbjct: 583 QKNGKGFYAYEADKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDIINW 630
Query: 466 IFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 631 MMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|330808852|ref|YP_004353314.1| multifunctional fatty acid oxidation complex [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327376960|gb|AEA68310.1| putative multifunctional fatty acid oxidation complex [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 703
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 266/509 (52%), Gaps = 17/509 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQ---LVSTARQWALDILEHRRPWVATLYKTDKIE 57
++++S+ V+ EA +GL+ +V Q L A +A + + V L +E
Sbjct: 153 LLVSSRHVQAPEALKIGLISQIVPGTQSQELRDAAVSYAKAVAHAQPQRVRDLV----LE 208
Query: 58 PL-GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
P+ ++ + AR A K++ + P ID +EA L+ E+ F +L S+
Sbjct: 209 PMDATTMDVLQAARRAAAKKSAHNKAPQYAIDCIEAAFSLPFDEALEVESRLFSELEGSD 268
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
K+L + FFA+R +KVP G P V A++G G MG+GIA + V L
Sbjct: 269 VAKALRYAFFAEREAAKVPDAPP-GFKPAGVTCAAVIGAGTMGAGIAICFADAGIVVKLL 327
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
E + + L+ G+ R+R ++VK+G+MT ++ + + + V YE D D+V+EA+ E
Sbjct: 328 EASAEALDRGLQRIRDIYAAKVKRGRMTVQEMDACLQFVQPVCHYEEIGDCDVVVEAVFE 387
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+ LK+ +F L+ P +L +N+S ID+N++ T + GAHFF+PA+ M L E
Sbjct: 388 RIDLKKDVFTKLDAVMKPGALLLTNSSAIDINVMANMTGRPQNVAGAHFFAPANAMKLCE 447
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
IV+ +QTS + +V + +G+ +KK V G C GFA NR P LL+E G
Sbjct: 448 IVKGDQTSIETVVRAMKMGRDLKKVCAVSGTCDGFAANRSRAPLVTEMMLLLEEGARPEQ 507
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI-MQEDKRAGET 415
IDR + +FG PMGPF ++DL G V+ T + P+ Y+ + +P M E R G+
Sbjct: 508 IDRVMVEFGYPMGPFAVSDLSGLDVSYDTRKRRAAADPQ--YRKLHVPDRMVELGRKGQK 565
Query: 416 TRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
G+Y Y+E R D EV + I G P+ ++ +I++ + F +NEA
Sbjct: 566 NGAGWYRYEEGDRTPRHDEEVMRIIATVAHELGT---PQ-RTFTDSEILKRLLFASINEA 621
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
C++ EG A +A+D+D+ + G GFP +R
Sbjct: 622 CKILDEGKAYRASDIDVMWLYGFGFPRHR 650
>gi|398994041|ref|ZP_10696968.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM21]
gi|398133282|gb|EJM22496.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM21]
Length = 715
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 255/506 (50%), Gaps = 27/506 (5%)
Query: 11 EEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
E+A +G VDAVVAP +L+ A D R+P + L K + IE +
Sbjct: 177 EDALKVGAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKL-KLNAIEQMMAFE 235
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F QA PN P+ I ++ G L+ EA F KL ++ +SL+
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K D + VK+ A+LG G+MG GIA P+++K++NE +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++EN +KQ
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S + + KK+ K PIVV +C GF VNR+ FPY LV G D ID+ + K
Sbjct: 471 SEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG E FP+R + + ++ E KR G+ KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFY 590
Query: 422 LYDE----RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y+ ++K DP V + ++ I + ++S++DI+ + P+ E R
Sbjct: 591 AYETDKHGKQKKVADPSVLEVLK--------PIVYEQREVSDEDIINWMMIPLCLETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
+GI AA+ D+ V G+GFPP+R
Sbjct: 643 LEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|300114046|ref|YP_003760621.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
watsonii C-113]
gi|299539983|gb|ADJ28300.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
watsonii C-113]
Length = 737
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 173/559 (30%), Positives = 272/559 (48%), Gaps = 47/559 (8%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVV-----------------APNQLVSTAR--QWALDILE 41
++LT K + +A +LGLVD VV N S A QW +L
Sbjct: 168 VILTGKTMSASKARALGLVDEVVPQPVLLEAALARARELARENDDKSEASPFQWFGQLLS 227
Query: 42 HRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTH-----PIVCIDVVEAGVVS 96
W + LG + +F QARK+ + TH P+ ++ ++ G+
Sbjct: 228 SVLSWRQLRSLLLEKNSLGRSL-VFN----QARKKVLSHTHGNLPAPLQALEAIKTGMEQ 282
Query: 97 GPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGG 156
G AG + E E F L S ++L+ +F AQ K G TD +APR+V+KV +LG G
Sbjct: 283 GLEAGFKAEVEAFGDLAVSTKARNLMALFLAQSALKKDSG-TDEKVAPRKVRKVGVLGAG 341
Query: 157 LMGSGIA-TALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLL 215
LMGSG+A + PV LK+V ++ L G+ + + +V K +MT + ++ ++L+
Sbjct: 342 LMGSGVAYVTAAKARLPVRLKDVKQEVLRQGLRVLWNAVTEQVNKRRMTAGEKDRVLALV 401
Query: 216 TGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTY 275
+Y FK D+VIEA++E++ +KQQ+ ++E + P I ASNTS+I ++ I E +
Sbjct: 402 RPTTEYTGFKQADVVIEAVVEDLEVKQQVLREVETHGSPEMIFASNTSSIPIHKIAEASD 461
Query: 276 SKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNR 335
+ +VG H+FSP +PLLE++ T +++P+VI + +GK+ KT IVV + GF R
Sbjct: 462 RPEAVVGMHYFSPVPKVPLLEVIVTEKSAPEVIATCVALGKQQNKTVIVVRDGAGFYTTR 521
Query: 336 MFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPE 395
+ PY A L+ G + ID A+ FG P+GP +L D VG V E F
Sbjct: 522 ILAPYINEATHLLAEGVSIQDIDEALVNFGFPVGPLKLLDEVGIDVVQKIAHILEEAFGG 581
Query: 396 RTYKSMIIPIMQEDKRAGETTRKGFYLYDER------RKASPDPEVKKFIEKARSMSGVA 449
R + ++ + + R G+ +G Y Y + + DP V + G+
Sbjct: 582 RMKPTSVLEKLVDSHRFGKKNGQGLYRYQKSGGTFKGKGKQVDPSVYPLL-------GIK 634
Query: 450 IDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIH 509
D KL +I P++NEA + +GI A D D+ +V G+GFPP+ F
Sbjct: 635 PD---KKLEANEIAMRCLLPMLNEAVHCYRDGILRSARDGDVGAVFGLGFPPFLGGPFRF 691
Query: 510 RGFSKSSSCFKNLLCYFDQ 528
S + L Y +Q
Sbjct: 692 MDNRGSGKIVEELTGYQNQ 710
>gi|309783449|ref|ZP_07678154.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Ralstonia sp. 5_7_47FAA]
gi|404397820|ref|ZP_10989607.1| hypothetical protein HMPREF0989_04831 [Ralstonia sp. 5_2_56FAA]
gi|308917780|gb|EFP63472.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Ralstonia sp. 5_7_47FAA]
gi|348609994|gb|EGY59703.1| hypothetical protein HMPREF0989_04831 [Ralstonia sp. 5_2_56FAA]
Length = 680
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 228/404 (56%), Gaps = 9/404 (2%)
Query: 101 GLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGS 160
GLQ+E E F L+ + ++L + F +R +K+P + +PR V+ VA++G G MG+
Sbjct: 244 GLQRERELFLALVPTTAAQALRYQFKVEREATKLPAGAEN--SPRPVRTVAVVGAGTMGT 301
Query: 161 GIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLD 220
GIA A + + V+L E + LE G RV + Q RV GK+ ++ + L G LD
Sbjct: 302 GIAIAALDAGLAVLLLEQDAAALERGRVRVMEHYQGRVAAGKLGADEAAANEARLVGTLD 361
Query: 221 YESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRI 280
+ K+ D+VIEA+ E++++KQ +F ++ Y P +LA+NTS +D++ I T +
Sbjct: 362 WARMKEADLVIEAVFEDLAVKQGVFQQIDTYARPGAVLATNTSYLDVDAIAAATSRPQDV 421
Query: 281 VGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPY 340
+G HFFSPA+VM LLE+VR QT+P VI + +G +KKTP++ GN GF NR++ Y
Sbjct: 422 LGLHFFSPANVMKLLEVVRGAQTAPDVIATGMAVGSALKKTPVLTGNGFGFIGNRIYNAY 481
Query: 341 TQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAI-ATGMQFIENFPERTYK 399
+ ++E G +D A+T FG MGPF +ADL G +A Q ++ P Y
Sbjct: 482 RRQCEFMLEDGAWPEDVDNALTAFGFAMGPFAVADLSGLDIAWRMRKAQALQRDPRERYV 541
Query: 400 SMIIPIMQEDKRAGETTRKGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLS 458
I+ + E R G G+Y Y D ++ + D V++ I++A + G+ + L+
Sbjct: 542 D-ILDQLCEMGRLGRKAGAGYYAYADGKQVRTTDSAVREVIQQASARRGI----ERRHLT 596
Query: 459 EKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
K+I +VNEA ++ AEGIA + +D+D+ V G GFP +
Sbjct: 597 PKEIQRRALLAMVNEAAQLIAEGIAARPSDVDVVLVQGYGFPRW 640
>gi|409200476|ref|ZP_11228679.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudoalteromonas flavipulchra JG1]
Length = 700
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 259/504 (51%), Gaps = 18/504 (3%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALD-ILEHRRPWVATLYKTDKIEPLG 60
MLT K V+ ++A GLVD V + L+ A + A + R+P + + + + P G
Sbjct: 164 MLTGKQVRPKQAKKAGLVDDSVPHSILLDVAVKLARKGKPKPRKPNLDKISQLLESNPFG 223
Query: 61 EAREIFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
IFK A+ +K + P+ I V A V G + EAE F L+ SE +
Sbjct: 224 R-NIIFKKAQENVEKKTGGHYPAPLAIIKAVRASVELDKLKGYKTEAEGFADLVMSEVSR 282
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKEV 178
SL IFFA K DL AP V++VA+LGGGLMG+GI + + + PV +K+V
Sbjct: 283 SLRGIFFATTEMKKDFQGEDL--AP--VQRVAVLGGGLMGAGITHVSAVKAGTPVRIKDV 338
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ + + L R K+ +++ + + T++++TG DY FK DMVIEA+ E++
Sbjct: 339 AHQGISNALNYSYKILTQRQKRRIISKAEMQSTLNMITGTTDYSGFKHTDMVIEAVFEDL 398
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
LKQ + AD+E+ C I ASNTS++ + I + + ++G H+FSP MPL+EI+
Sbjct: 399 DLKQSMVADIERECSESTIFASNTSSLPIGQIAAKATRPENVIGLHYFSPVEKMPLVEII 458
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
+ TS +VI + +K KTPIVV + GF VNR+ PY A L+ G + ID
Sbjct: 459 PHDTTSDEVIARTVAFARKQGKTPIVVKDKAGFYVNRILAPYVNEAANLLLAGEPIEKID 518
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+A+ +FG P+GP L D VG + + R M + KR G + +
Sbjct: 519 QALVEFGFPVGPLALLDEVGVDIGSKIAPILEKELGARFKAPDAFARMIDSKRLGRKSGR 578
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY Y+ ++ D V + + GV P KL++++I ++NEA R
Sbjct: 579 GFYTYEGKKGKQVDESVYELL-------GVTPSP---KLNKQEIANRCVAQMLNEAARCL 628
Query: 479 AEGIAVKAADLDIASVMGMGFPPY 502
EGI A D DI ++ G+GFPP+
Sbjct: 629 DEGIIRNARDGDIGAIFGIGFPPF 652
>gi|154244856|ref|YP_001415814.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Xanthobacter
autotrophicus Py2]
gi|154158941|gb|ABS66157.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Xanthobacter
autotrophicus Py2]
Length = 704
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 221/402 (54%), Gaps = 8/402 (1%)
Query: 100 AGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMG 159
+GL E F L S K+L H+FFA+R KVPG+ G+APR V+ VA++G G MG
Sbjct: 248 SGLALERAAFLALRESAEAKALRHLFFAEREAGKVPGLE--GVAPRPVEAVAVIGAGTMG 305
Query: 160 SGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVL 219
+GIA AL + V L E + + AG RV +VK G++T + + + +T
Sbjct: 306 AGIAMALADAGLAVTLIERDAEAAAAGFQRVSDLYARQVKSGRLTDAQGAERRARVTATA 365
Query: 220 DYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDR 279
D+ VD+V+EA E++++K IF L+ P +LA+NTS +DL+ I T
Sbjct: 366 DWGRLSAVDLVVEAAFEDMAVKADIFRRLDAVAKPGAVLATNTSYLDLDAIAAATSRPQD 425
Query: 280 IVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFP 339
+VG HFF+PA+VM LLE+VR +++P VI L + K++ K P+V GNC GF NR++
Sbjct: 426 VVGLHFFAPANVMKLLEVVRPARSAPDVIATALALAKRMGKQPVVAGNCDGFIGNRIYAL 485
Query: 340 YTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTY 398
Y + A +LVE GT +D A+ +G MG F ++D+ G +A A + P Y
Sbjct: 486 YRRHAEVLVEDGTSPQEVDAALEAYGFAMGLFAVSDMSGLDIAYAMRKRRAATRDPAERY 545
Query: 399 KSMIIPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLS 458
+ I + E R G T G+Y YD + DP V+ I +AR+ G I P+ S
Sbjct: 546 VA-IADRLVEQGRLGRKTGAGWYAYDAAGAKTCDPVVEAVIAEARAEKG--ITPR--AFS 600
Query: 459 EKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFP 500
I + + NE + AEGIA++A+D+D+A V G GFP
Sbjct: 601 AGQIQRRLLAVMANEGAKALAEGIALRASDIDLAFVHGYGFP 642
>gi|293394003|ref|ZP_06638309.1| fatty oxidation complex [Serratia odorifera DSM 4582]
gi|291423563|gb|EFE96786.1| fatty oxidation complex [Serratia odorifera DSM 4582]
Length = 729
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 169/516 (32%), Positives = 261/516 (50%), Gaps = 18/516 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K + ++A +GLVDAVVAP +L A + +E + W A Y+ K+EPL
Sbjct: 166 IIAAGKDISAKDALKVGLVDAVVAPEKLADAALKMLQQAIEGQLDWRA--YRRPKLEPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + A + P+ + +EA G L+ E F L RS
Sbjct: 224 LSPIEAAMSFTTAKGMVLQTAGKHYPAPMTAVKTIEAAARMGRNDALKLETASFVPLARS 283
Query: 116 ETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++LV IF Q S+ + + AP K+ A+LG G+MG GIA L PVI
Sbjct: 284 NEARALVGIFLNDQFVKSQAKKLANKQEAP---KQAAVLGAGIMGGGIAYQSALKGVPVI 340
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K++NEK L G+ L ++++GK+ K ++ + LDY + +++EA+
Sbjct: 341 MKDINEKSLALGMSEAAKLLNKQLERGKLDGMKMAGVLATIQPTLDYAGIERAQVIVEAV 400
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
+EN +K + +++E +LASNTSTI +N + + G HFF+P H MPL
Sbjct: 401 VENPKVKAAVLSEVEALIGEQTVLASNTSTIPINELAKSLKRPQNFCGMHFFNPVHRMPL 460
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+R TS I ++ ++ KTPIVV +C GF VNR+ FPY LL+ G D
Sbjct: 461 VEIIRGEHTSDSTIAAVVSYASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADF 520
Query: 355 YLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKR 411
+D+ + K FG PMGP L D+VG A FPER K+ + +M +++R
Sbjct: 521 RTVDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMAKNYRDAVDVMFDNQR 580
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ + GFY Y + K P K E+ ++ P+ +S ++I+ + P++
Sbjct: 581 FGQKNQLGFYRYSQDSKGKPR---KDNDEQTDALLADVSQPR-QNISGEEIIARMMIPMI 636
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
NE R EGI A+ D+A V G+GFPP+ F
Sbjct: 637 NEVVRCLEEGIIASPAEADMALVYGIGFPPFHGGVF 672
>gi|261346522|ref|ZP_05974166.1| fatty oxidation complex, alpha subunit FadB [Providencia
rustigianii DSM 4541]
gi|282565226|gb|EFB70761.1| fatty oxidation complex, alpha subunit FadB [Providencia
rustigianii DSM 4541]
Length = 730
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 270/543 (49%), Gaps = 36/543 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVV-------APNQLVSTARQWALDILEHRRPWVATLYKT 53
++ K V G +A LGLVDAVV A Q++ A A++ + R+P + TL
Sbjct: 166 IITAGKDVSGTQALKLGLVDAVVETEKLPQAALQIIEQAIAGAINWKQKRQPKLETL--- 222
Query: 54 DKIEPLGEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKL 112
K+ P+ E F A+ + A + P+ ++ +E L+ E F L
Sbjct: 223 -KLSPI-EQTMSFSVAKGMVYQVAGKHYPAPMTAVNTIEKAANCTREEALKHETAAFVPL 280
Query: 113 LRSETCKSLVHIFFAQ---RGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILS 169
S+ ++LV +F + TSK + AP + A+LG G+MG GIA
Sbjct: 281 AHSDVARALVSVFLNDQQVKATSK--KIAGKVTAP---TQAAVLGAGIMGGGIAYQSASK 335
Query: 170 NYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDM 229
V++K++NEK L+ GI + L + ++GK+T ++ T++ + L Y ++V +
Sbjct: 336 GIAVLMKDINEKSLDLGINEAKKLLNGQFERGKITADRMATTLASIHPSLSYSGIENVQI 395
Query: 230 VIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPA 289
++EA++EN +K + +++E +LASNTSTI + + + G HFF+P
Sbjct: 396 IVEAVVENPKIKAAVLSEVESLITSETLLASNTSTIPITELANSLKRPENFCGMHFFNPV 455
Query: 290 HVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVE 349
H MPL+EI+R +TS + I ++ K+ KTPIVV +C GF VNR+ FPY LL++
Sbjct: 456 HRMPLVEIIRGEKTSEETIAKVVSFANKMGKTPIVVNDCPGFFVNRVLFPYFAGFNLLIQ 515
Query: 350 RGTDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK--SMIIPIM 406
G D ID+ + K FG PMGP L D+VG A + FP+R K I IM
Sbjct: 516 DGADFREIDKVMEKEFGWPMGPAYLLDVVGIDTAFHAEQVMAQGFPQRMQKVGKNAIDIM 575
Query: 407 QEDKRAGETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDI 462
E +R G+ KGFYLY+ +K P DP + + AI ++++I
Sbjct: 576 FEQQRFGQKNGKGFYLYETDKKGKPKKIDDPHTDELL--------FAIRQNKRSFTKEEI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNL 522
+ + P+VNE R EGI +D DIA V G+GFPP+R F + S S K
Sbjct: 628 IARMMAPMVNEVVRCLEEGIIQSPSDADIALVYGLGFPPFRGGVFCYLDTLGSQSYVKTA 687
Query: 523 LCY 525
Y
Sbjct: 688 ESY 690
>gi|77460100|ref|YP_349607.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas fluorescens Pf0-1]
gi|118572964|sp|Q3K9D8.1|FADB_PSEPF RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|77384103|gb|ABA75616.1| fatty oxidation complex alpha subunit [Pseudomonas fluorescens
Pf0-1]
Length = 715
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 255/506 (50%), Gaps = 27/506 (5%)
Query: 11 EEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
E+A +G VDAVVAP +L+ A D R+P + L + + IE +
Sbjct: 177 EDALKVGAVDAVVAPEKLQDAALELIKRAVSGEFDYKAKRQPKLEKL-RLNAIEQMMAFE 235
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F QA PN P+ I ++ G L+ EA F KL ++ +SL+
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K D + VK+ A+LG G+MG GIA P+++K++NE +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++EN +KQ
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S I + KK+ K PIVV +C GF VNR+ FPY LV G D ID+ + K
Sbjct: 471 SELAIATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG E FP+R + I ++ E KR G+ KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFY 590
Query: 422 LYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y+ +K DP V + ++ I + +++++DI+ + P+ E R
Sbjct: 591 AYEADKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMMIPLCLETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
+GI AA+ D+ V G+GFPP+R
Sbjct: 643 LEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|398865038|ref|ZP_10620565.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM78]
gi|398244201|gb|EJN29765.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM78]
Length = 715
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 255/506 (50%), Gaps = 27/506 (5%)
Query: 11 EEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
E+A +G VDAVVAP +L+ A D R+P + L K + IE +
Sbjct: 177 EDALKVGAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKL-KLNAIEQMMAFE 235
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F QA PN P+ I ++ G L+ EA F KL ++ +SL+
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTAAAQSLIG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K D + VK+ A+LG G+MG GIA P+++K++NE +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++EN +KQ
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S + + KK+ K PIVV +C GF VNR+ FPY LV G D ID+ + K
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG E FP+R + ++ E KR G+ KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDTRSAVDVLYEAKRLGQKNGKGFY 590
Query: 422 LYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y+ +K DP V + ++ + + + ++S++DI+ + P+ E R
Sbjct: 591 AYETDKKGKQKKVADPSVLEVLKP------IVFEQR--EVSDEDIINWMMIPLCLETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
+GI AA+ D+ V G+GFPP+R
Sbjct: 643 LEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|149374995|ref|ZP_01892768.1| 3-hydroxyacyl-CoA dehydrogenase [Marinobacter algicola DG893]
gi|149360884|gb|EDM49335.1| 3-hydroxyacyl-CoA dehydrogenase [Marinobacter algicola DG893]
Length = 715
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 248/509 (48%), Gaps = 29/509 (5%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTA-------RQWALDILEHRRPWVATLYKTDKIEPLGE 61
+ ++A +G VDAV+ +LV A LD + RR K + +E +
Sbjct: 175 RADKALKVGAVDAVLEGEKLVEAAISIINQCNDGKLD-YQARRDEKKGKIKLNAMESM-M 232
Query: 62 AREIFK-FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A EI K F QA K P P+ I V++ ++ EA+ F K+ ++
Sbjct: 233 AFEISKAFVAGQAGKNYP---APVEAIKVMQKHAGLTRDKAIEVEAKGFAKMAKTNVAAC 289
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LV +F + K VK A+LG G+MG G+A L P+I+K++ +
Sbjct: 290 LVGLFLNDQELKKK--AKAWEKEANDVKLAAVLGAGIMGGGVAYQSALKGTPIIMKDIAQ 347
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+ + G+ + L RV KGKM K ++ +T L+Y FK+VD+V+EA++EN +
Sbjct: 348 EGIALGLKEAKKLLSKRVDKGKMDASKMADVLNSITPTLNYGDFKNVDLVVEAVVENPKV 407
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K + + E + IL SNTSTI ++L+ + + G HFF+P H+MPL+E++R
Sbjct: 408 KDAVLRETEDHIREDAILTSNTSTISIDLLAKNLKRPENFCGMHFFNPVHMMPLVEVIRG 467
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TS + I + K + KTPIVV +C GF VNR+ FPY LV G D +D+
Sbjct: 468 AKTSDRAIATTVAYAKAMGKTPIVVKDCPGFLVNRVLFPYFGGFVNLVRDGADFQHVDKV 527
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK--SMIIPIMQEDKRAGETTRK 418
+ KFG PMGP L D+VG G + FP+R + I +M ++ R G+ K
Sbjct: 528 MEKFGWPMGPAYLLDVVGMDTGKHAGEVMADGFPDRMKHEGTTAIDVMFDNNRYGQKNDK 587
Query: 419 GFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY Y+ RK D E K +E S++DI+ + P+ E
Sbjct: 588 GFYKYELDRKGKQKKVVDEETYKLLEPVVQGKN--------DFSDEDIIARMMLPLCLET 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AD D+ + G+GFPP+R
Sbjct: 640 VRCLEDGIVEDPADADMGLIFGIGFPPFR 668
>gi|170703604|ref|ZP_02894348.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia ambifaria IOP40-10]
gi|170131485|gb|EDT00069.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia ambifaria IOP40-10]
Length = 511
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 225/430 (52%), Gaps = 7/430 (1%)
Query: 75 KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKV 134
K++ L P +D VEA + AG++ E F + + S LVH FFA+R +K
Sbjct: 35 KKSRGLFSPAKIVDAVEAALTQSFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKA 94
Query: 135 PGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANL 194
P P V+++ ++GGG MG+GIA A + + PV + E +E L G V
Sbjct: 95 PEARRASARP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVY 152
Query: 195 QSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPP 254
V KG+MT ++ G Y++ D+VIEA+ E++++K+ +FA+L + C
Sbjct: 153 DGLVAKGRMTPAAHAARLARFKGSTSYDALAQADVVIEAVFEDMAVKKAVFAELARVCKA 212
Query: 255 HCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDI 314
+LA+NTS +D++ + ++G HFFSPA+VM LLEIV + +V+ +
Sbjct: 213 GAVLATNTSYLDIDELAASIDRPADVIGLHFFSPANVMKLLEIVVPARVGAEVVATAFAL 272
Query: 315 GKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLA 374
K++KKTP+ G C GF NR+ Y AA L+E G Y IDRA+ +FG PMGPF++
Sbjct: 273 AKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVV 332
Query: 375 DLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLY-DERRKASPDP 433
DL G + AT + R I + E G+ T +G+YLY D R +PDP
Sbjct: 333 DLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTARGYYLYPDGARVGTPDP 392
Query: 434 EVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIAS 493
EV+ + R+ +A P+ S+ +I+ ++NE V E IA++ D+D
Sbjct: 393 EVEAIVADERAKKRIA--PR--AFSDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVF 448
Query: 494 VMGMGFPPYR 503
+ G GFP YR
Sbjct: 449 LHGYGFPRYR 458
>gi|197099993|ref|NP_001127606.1| peroxisomal bifunctional enzyme [Pongo abelii]
gi|75054763|sp|Q5R5M8.1|ECHP_PONAB RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|55732475|emb|CAH92938.1| hypothetical protein [Pongo abelii]
Length = 723
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 270/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D VV + + + A++ + LE RR I+
Sbjct: 151 LITSGRHILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRR------LCNKPIQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + R+Q P C+ V+A V G++KE E F L +S
Sbjct: 205 SLPNMDTIFSEALLKMRRQHPGCLAQEACVRAVQAAVQYPYEVGVKKEEELFLYLFQSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + F A+R +K G + + R V V ++G G MG GI + + PVI
Sbjct: 265 ARALQYAFLAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 325 AVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E +SLK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 383 FEEMSLKKQVFAELSAICKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY A+ L+E G+
Sbjct: 443 LEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG MGPFR++DL G V TG P R + IP
Sbjct: 503 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDE--RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R DP + KF+ + R I+P+ +S+ +
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKADPWLSKFLSQYRETH--HIEPR--TISQDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EGIA +D+ + G G+P ++ + + +
Sbjct: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 679 LQKYYRQ 685
>gi|407695351|ref|YP_006820139.1| 3-hydroxyacyl-CoA dehydrogenase [Alcanivorax dieselolei B5]
gi|407252689|gb|AFT69796.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Alcanivorax dieselolei B5]
Length = 715
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 162/500 (32%), Positives = 259/500 (51%), Gaps = 15/500 (3%)
Query: 11 EEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG----EAREIF 66
E+A G+VDAVV + L + A L + + A + +K+EPL E F
Sbjct: 177 EKALKDGVVDAVVKHDDLHNAAIDLVKQCLAGKIDFRAK--RQEKLEPLTLPPMENMMAF 234
Query: 67 KFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
+ A +QA N P+ + V++ L EA+ F K+ ++ +LV +F
Sbjct: 235 QTCTAMVMQQAGKNYPAPVEAVKVMQKASGMKREEALDVEAQGFAKVAKTPQATALVGLF 294
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
A + KV G + + +++ A+LG G+MG GIA L P+I+K++ +K L+
Sbjct: 295 LADQQVKKVNG--KVAKTAKDIQQAAVLGAGIMGGGIAFQSALKGTPIIMKDIADKALDL 352
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
G+ L RV KGKM K K +S + L+Y F++V++++EA++EN +KQ +
Sbjct: 353 GMNEASKLLAKRVAKGKMDAAKMGKVLSSIRPTLNYGDFENVNVIVEAVVENTKVKQAVL 412
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
A++E+ ILASNTSTI + + E + G HFF+P H+MPL+E++R +TS
Sbjct: 413 AEVEEKVADGTILASNTSTISITKLAEALKKPENFGGMHFFNPVHMMPLVEVIRGEKTSD 472
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
+ I L+ +K+ K PIVV +C GF VNR+ FPY +LV G D +D+ + KFG
Sbjct: 473 ETIATLVAYAQKMGKNPIVVNDCPGFLVNRVLFPYFAGFGMLVRDGADFQQVDKVMQKFG 532
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIP--IMQEDKRAGETTRKGFYLY 423
PMGP L D+VG + + FP+R P +M E++R G+ GFY Y
Sbjct: 533 WPMGPAYLLDVVGIDTGVHAAKVMADGFPDRMQHDFKDPTEVMFENERYGQKNGIGFYRY 592
Query: 424 DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIA 483
++ +K P KK ++ I + + ++I+ + P+ E R + I
Sbjct: 593 EQDKKGKP----KKVADEGSYELLKPIAAERKEFDAEEIIARMMIPMCTETVRCLEDNIV 648
Query: 484 VKAADLDIASVMGMGFPPYR 503
AA+ D+A + G+GFPP+R
Sbjct: 649 GSAAEADMAMIYGIGFPPFR 668
>gi|398910903|ref|ZP_10655274.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM49]
gi|398927425|ref|ZP_10662958.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM48]
gi|398169825|gb|EJM57794.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM48]
gi|398184988|gb|EJM72411.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM49]
Length = 715
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 255/506 (50%), Gaps = 27/506 (5%)
Query: 11 EEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
E+A +G VDAVVAP +L+ A D R+P + L K + IE +
Sbjct: 177 EDALKVGAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKL-KLNAIEQMMAFE 235
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F QA PN P+ I ++ G L+ EA F KL ++ +SLV
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLVG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K D + VK+ A+LG G+MG GIA P+++K++NE +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++EN +KQ
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAEVEDQVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S + + KK+ K PIVV +C GF VNR+ FPY LV G D ID+ + K
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG E FP+R + + ++ E KR G+ KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFY 590
Query: 422 LYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y+ +K DP V + ++ + + + +++++DI+ + P+ E R
Sbjct: 591 AYETDKKGKQKKVADPSVLEVLKP------IVFEQR--EVTDEDIINWMMIPLCLETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
+GI AA+ D+ V G+GFPP+R
Sbjct: 643 LEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|440738732|ref|ZP_20918258.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas fluorescens BRIP34879]
gi|447915860|ref|YP_007396428.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas poae RE*1-1-14]
gi|440380837|gb|ELQ17394.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas fluorescens BRIP34879]
gi|445199723|gb|AGE24932.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas poae RE*1-1-14]
Length = 715
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 255/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKI 56
K E+A +G VDAVVAP++L A D R+P + L K + I
Sbjct: 170 AGKENNAEDALKVGAVDAVVAPDKLAEAALSLIKGAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEAQVKDDTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I + E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ V + + ++S++DIV + +
Sbjct: 584 KNGKGFYAYEADKKGKQKKVADPSVHEV------LAPVIYEQR--EVSDEDIVNWMMIAL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|398984439|ref|ZP_10690601.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM24]
gi|399012111|ref|ZP_10714438.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM16]
gi|398116410|gb|EJM06173.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM16]
gi|398155667|gb|EJM44104.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM24]
Length = 715
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 169/513 (32%), Positives = 257/513 (50%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A + VDAVVAP +L+ A D R+P + L K + I
Sbjct: 170 SGKENRPEDALKVSAVDAVVAPEKLQEAALELIKRAISGEFDFKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNAIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I ++ E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ I + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYEADKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|392556436|ref|ZP_10303573.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudoalteromonas undina NCIMB 2128]
Length = 730
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 267/531 (50%), Gaps = 30/531 (5%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
MLT K ++ ++A G++D V + L+ A+++A ++ A K DKI L E
Sbjct: 166 MLTGKQIRPKQAKKAGVLDDCVPQSVLLKVAKEFA-----AKKKQQAKEPKLDKISKLLE 220
Query: 62 ARE-----IFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
+ IFK A+ +K + P+ I V A V + EAE F L+ S
Sbjct: 221 SNPFGRNFIFKKAKENVLKKTGGHYPAPLAIIKAVRASVELDEMKAYKTEAEGFATLVMS 280
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
+ K+L IFFA K D AP + K A+LGGGLMG+GIA + + + PV
Sbjct: 281 DESKALRGIFFATTEMKKEWRNDD---APA-ISKTAVLGGGLMGAGIAHVSAVKAKLPVR 336
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+V E+ + + L R+K+ M++ + T++ +TG DY FK +D+VIEA+
Sbjct: 337 IKDVAEQGISNAMNYTYKILDKRLKRRIMSKADMQLTMNRITGTTDYSGFKHIDLVIEAV 396
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++ LKQ + AD+E+ C + I ASNTS++ ++ I + + ++G H+FSP MPL
Sbjct: 397 FEDLELKQGMVADVEQQCQANTIFASNTSSLPISQIAAKAERPENVIGLHYFSPVEKMPL 456
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+ TS + I +++ +K KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 457 VEIIPHEGTSQETIARVVNFARKQGKTPIVVKDMAGFYVNRILAPYLNEAANLMLAGEPI 516
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID A+ +FG P+GP L D VG + + ER M + KR G
Sbjct: 517 EKIDAALVEFGFPVGPLALLDEVGIDIGSKIAPILEKELGERFKGPDAFSRMIDSKRLGR 576
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T +GFY YD++ KK E + GV P +L++ +I + ++NEA
Sbjct: 577 KTGRGFYEYDKKG--------KKVDESVYELLGVTPAP---RLNKNEIAKRCVSQMLNEA 625
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR---FVTFIHRGFSKSSSCFKNL 522
R +GI D DI ++ G+GFPP+ F G SK SS L
Sbjct: 626 ARCLDDGIIASPRDGDIGAIFGIGFPPFLGGPFSYMDKLGASKISSDMSTL 676
>gi|334140782|ref|YP_004533988.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Novosphingobium sp.
PP1Y]
gi|333938812|emb|CCA92170.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Novosphingobium sp.
PP1Y]
Length = 709
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 157/508 (30%), Positives = 268/508 (52%), Gaps = 27/508 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEH--RRPWV---ATLYKTDK 55
+M + + VK EEA ++GL+DAV+ LV A +A +++ R P V + + D+
Sbjct: 166 IMTSGRQVKAEEALAIGLLDAVLPGQDLVMEAVAFARNVVAEGARTPRVRDREDMLEVDR 225
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
+P E + F A + L P V A + GL E + L
Sbjct: 226 KDP--ELVDRFFIKNAHRFR---GLDAPTAIGAAVRAALSLPFEEGLAHEQQLCLALAEG 280
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++L ++FFA+R T++VP + + R V + ++G G MG GI + + PV L
Sbjct: 281 HQSEALRYLFFAERQTTRVPDLPPNTMQ-RPVASIGVIGAGTMGGGITMTFLDAGLPVTL 339
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
E ++ LE G +R + ++ +KG+M+ ++ E +SLL+ LD + +D D VIEA+
Sbjct: 340 VETSKAALERGCSNIRRHYEASAQKGRMSADEVETRMSLLSPRLDLTALRDADFVIEAVF 399
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E+++LK+ +FA L+ P ILASNTS +DL+ I + T +R++G HFFSP +VM L+
Sbjct: 400 EDLALKRDLFAQLDALAAPDAILASNTSFLDLDAIADATSQPERVLGLHFFSPVNVMRLV 459
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VRT +T P+ + + + + I K P++ C GF NR+ P A +++ G +
Sbjct: 460 EVVRTTRTKPENVATAMSLARHIGKVPVLSAVCDGFIANRLMAPRGAEAEIMMLEGIPIE 519
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
ID+ +T +G +G F++ D+VG V + G ERT ++ R G
Sbjct: 520 RIDKVLTDYGFGIGHFQMMDMVGLDV-VGRGAS------ERTVMGDLVAA----GRLGLK 568
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEK-ARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
+ G+Y YD + + P + I AR + D ++S+++++ + PVVNE
Sbjct: 569 SGSGYYDYDGKHRPLPSKLTETTIAAVAREKGVIGSD----QVSDEELLTRLLCPVVNEG 624
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPY 502
+ EGIA++A+D+D+A+V+G +P +
Sbjct: 625 AHILEEGIALRASDIDVAAVLGYNWPAH 652
>gi|423690630|ref|ZP_17665150.1| fatty oxidation complex, alpha subunit [Pseudomonas fluorescens
SS101]
gi|388001320|gb|EIK62649.1| fatty oxidation complex, alpha subunit [Pseudomonas fluorescens
SS101]
Length = 715
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 256/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKI 56
K K E+A +G VDAVVAP++L A D R+P + L K + I
Sbjct: 170 AGKENKAEDALKVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEAQVKDDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ V + + ++S++DI+ + +
Sbjct: 584 KNGKGFYAYETDKKGKQKKVADPSVHEV------LAPVIYEQR--EVSDEDIINWMMIAL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|148259275|ref|YP_001233402.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Acidiphilium cryptum
JF-5]
gi|146400956|gb|ABQ29483.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Acidiphilium cryptum JF-5]
Length = 698
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 166/514 (32%), Positives = 268/514 (52%), Gaps = 27/514 (5%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRP--WVATLYKTDKIEPL 59
+++ K + + A + GL+DA+V S Q A+D P V ++DKI
Sbjct: 154 IVSGKMIGAKAALADGLIDAIV------SDPVQGAIDFAHTVDPAKLVRVRDRSDKIAAA 207
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
F+ A A+A K+ + P C++ V G + E + F +L+ + +
Sbjct: 208 KADPSAFEAAAAEATKRLKGVEAPAACVEAVRNSFTLPFDEGARAEQQAFMRLVVGDQSR 267
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ H+FFA+R K+PG+ + ++ + ++GGG MG GIA + PV + E +
Sbjct: 268 AQRHVFFAEREAQKIPGIGPE-VKGAKIGRAVVIGGGTMGGGIAMNFANAGIPVTIVETD 326
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
E L G+ RVR V++G + EK ++L +G D+ + D+VIEA+ E +
Sbjct: 327 EAALARGLDRVRGTYDVSVQRGALPAGTTEKRMALFSGSTDWGVIAEADIVIEAVFEELG 386
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
LK+++FA L+ P +LA+NTST+D++ I T ++G HFFSPA+VM LLEIVR
Sbjct: 387 LKKEVFARLDGIARPGALLATNTSTLDVDAIAAATKRPGDVLGMHFFSPANVMKLLEIVR 446
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
++S Q I + +GK + K P+VVGNC GF NRM T L+ G +D
Sbjct: 447 GKESSAQSIATAIAVGKTLGKVPVVVGNCDGFVGNRMLARRTIECERLMLEGALPQQVDA 506
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI---MQEDKRAGETT 416
+ FG PMGPF + DL G V + R ++ P+ + E R G+ T
Sbjct: 507 VVKAFGFPMGPFAMGDLAGLDV----------GWRIRKHRGATAPVSDALCEMGRFGQKT 556
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
+G+Y+Y+ R +PDPEV+ I + + GV +S+++I+E + +P++NEA
Sbjct: 557 GRGYYVYENGSRVPTPDPEVEALISEKAAALGV----TRRAISDQEILERMTYPMINEAA 612
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIH 509
R+ EGIA++ +D+D+ V G G+P +R H
Sbjct: 613 RILEEGIAIRPSDVDVVWVYGYGWPVWRGGPCFH 646
>gi|333901103|ref|YP_004474976.1| Fatty acid oxidation complex subunit alpha [Pseudomonas fulva 12-X]
gi|333116368|gb|AEF22882.1| Fatty acid oxidation complex subunit alpha [Pseudomonas fulva 12-X]
Length = 715
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 248/483 (51%), Gaps = 20/483 (4%)
Query: 27 QLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQARKQAPNLTHPIVC 86
L+ A LD R+P + L K + IE + F QA PN P+
Sbjct: 200 DLIKRAISGELDYKAKRQPKLEKL-KLNAIEQMMAFETAKGFVAGQA---GPNYPAPVEA 255
Query: 87 IDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRR 146
I ++ G L+ EA F KL ++ KSL+ +F + K D +
Sbjct: 256 IKTIQKAANFGRDKALEVEAAGFAKLAKTSVAKSLIGLFLNDQELKKKAKAHDA--IAKD 313
Query: 147 VKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQE 206
VK A+LG G+MG GIA P+++K++ E+ ++ G+G L RV+KG+MT
Sbjct: 314 VKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIKMGLGEASKLLAKRVEKGRMTTA 373
Query: 207 KFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTID 266
+ +++S + + Y F VD+V+EA++EN +KQ + A++E ILASNTSTI
Sbjct: 374 QMAESLSAIRPTMSYGDFGHVDIVVEAVVENPKVKQAVLAEVEGAVKEGTILASNTSTIS 433
Query: 267 LNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVG 326
++L+ + + VG HFF+P H+MPL+E++R ++S + + + KK+ K PIVV
Sbjct: 434 ISLLAKALKHPENFVGMHFFNPVHMMPLVEVIRGEKSSDEAVATTVAYAKKMGKNPIVVN 493
Query: 327 NCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATG 386
+C GF VNR+ FPY L+ G D ID+ + KFG PMGP L+D+VG
Sbjct: 494 DCPGFLVNRILFPYFGGFATLLSFGVDFARIDKVMEKFGWPMGPAYLSDVVGIDTGHHGR 553
Query: 387 MQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFYLYDERRKASP----DPEVKKFIE 440
E FP+R + +M E R G+ KGFY Y+ ++ P DPE + ++
Sbjct: 554 DVMAEGFPDRMAVDGRTAVDVMYEANRLGQKNGKGFYAYETDKRGKPKKVSDPEAYELLK 613
Query: 441 KARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFP 500
+I + +LS++DIV ++ P+ E R +GI AA+ D+ V G+GFP
Sbjct: 614 --------SIVKEQRELSDEDIVNIMMIPLCLETVRCLEDGIVETAAEADMGLVYGIGFP 665
Query: 501 PYR 503
P+R
Sbjct: 666 PFR 668
>gi|307544348|ref|YP_003896827.1| multifunctional fatty acid oxidation complex subunit alpha
[Halomonas elongata DSM 2581]
gi|307216372|emb|CBV41642.1| multifunctional fatty acid oxidation complex subunit alpha
[Halomonas elongata DSM 2581]
Length = 727
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 258/505 (51%), Gaps = 27/505 (5%)
Query: 15 SLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLY--KTDKIEPLG----EAREIFKF 68
S+G VDAVV P L + AR DIL R +T+K PLG E F+
Sbjct: 181 SVGAVDAVVPPESLEAAAR----DILNRARSGELDYQARRTEKCSPLGLDAIEQMMAFET 236
Query: 69 ARAQ-ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQK-EAEDFQKLLRSETCKSLVHIFF 126
A+ A K P+ PI I V++ G RA Q EA+ F KL ++ C +LV +F
Sbjct: 237 AKGYVAGKAGPHYPAPIEAIKVIQKGA-GEERARAQAIEAKAFGKLALTDVCYNLVGLFL 295
Query: 127 AQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAG 186
+ K G P V++ +LG G+MG GIA P+++K++ ++ +E G
Sbjct: 296 NDQVVKKKGGQYAKQSVP--VERAGVLGAGIMGGGIAYQSASKGTPILMKDIKDEAIELG 353
Query: 187 IGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFA 246
+ R +V++GK++ E+ + +S + L Y F VD+V+EA++EN +K + A
Sbjct: 354 LKEARKLFAKQVERGKLSNEQMAERLSNIRPTLSYGDFSHVDLVVEAVVENPKVKGAVLA 413
Query: 247 DLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQ 306
++E+ IL SNTSTI + + E + G HFF+P H MPL+E++R +T
Sbjct: 414 EVEENVSEDTILTSNTSTISITRLAENLKRPENFCGMHFFNPVHRMPLVEVIRGEKTGDG 473
Query: 307 VIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGM 366
+ + +K+ KTPIVV +C GF VNR+ FPY L+ G D +DR + KFG
Sbjct: 474 AVAATVAYARKMGKTPIVVNDCPGFLVNRVLFPYFGGFSQLMAAGADFQRVDRVMEKFGW 533
Query: 367 PMGPFRLADLVGFGVAIATGMQFIENFPER--------TYKSMIIPIMQEDKRAGETTRK 418
PMGP L D+VG A+ G E FPER + I +M +++R G+ K
Sbjct: 534 PMGPAYLLDVVGMDTAVHAGEVMAEGFPERMGSLGGAGSEGKSAIQVMFDNERLGQKNAK 593
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY Y+E +K P +K ++A I + S++DI+ + P+ E R
Sbjct: 594 GFYAYEEDKKGKP----RKVRDEAAIELVKGIAESGREFSDEDIIARMMTPLCLETVRCL 649
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
+GI A+ D+A + G+GFPP+R
Sbjct: 650 EDGIVGTPAEADMALIYGIGFPPFR 674
>gi|338983485|ref|ZP_08632674.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Acidiphilium sp. PM]
gi|338207592|gb|EGO95540.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Acidiphilium sp. PM]
Length = 698
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 268/514 (52%), Gaps = 27/514 (5%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRP--WVATLYKTDKIEPL 59
+++ K + + A + GL+DA+V S Q A+D P V ++DKI
Sbjct: 154 IVSGKMIGAKAALADGLIDAIV------SDPVQGAIDFAHTVDPAKLVRVRDRSDKIAAA 207
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
F+ A A+A K+ + P C++ V G + E + F +L+ + +
Sbjct: 208 KADPSAFEAAAAEATKRLKGVEAPAACVEAVRNSFTLPFDEGARAEQQAFMRLVVGDQSR 267
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ H+FFA+R K+PG+ + ++ + ++GGG MG GIA + PV + E +
Sbjct: 268 AQRHVFFAEREAQKIPGIGPE-VKGAKIGRAVVIGGGTMGGGIAMNFANAGIPVTIVETD 326
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
E L G+ RVR V++G + EK +++ +G D+ + D+VIEA+ E +
Sbjct: 327 EAALARGLDRVRGTYDVSVQRGALPAGTTEKRMAMFSGSTDWGVIAEADIVIEAVFEELG 386
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
LK+++FA L+ P +LA+NTST+D++ I T ++G HFFSPA+VM LLEIVR
Sbjct: 387 LKKEVFARLDGIARPGALLATNTSTLDVDAIAAATKRPGDVLGMHFFSPANVMKLLEIVR 446
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
++S Q I + +GK + K P+VVGNC GF NRM T L+ G +D
Sbjct: 447 GKESSAQSIATAIAVGKTLGKVPVVVGNCDGFVGNRMLARRTIECERLMLEGALPQQVDA 506
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI---MQEDKRAGETT 416
+ FG PMGPF + DL G V + R ++ P+ + E R G+ T
Sbjct: 507 VVKAFGFPMGPFAMGDLAGLDV----------GWRIRKHRGATAPVSDALCEMGRFGQKT 556
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
+G+Y+Y+ R +PDPEV+ I + + GV +S+++I+E + +P++NEA
Sbjct: 557 GRGYYIYENGSRVPTPDPEVEALISEKAAALGV----TRRAISDQEILERMTYPMINEAA 612
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIH 509
R+ EGIA++ +D+D+ V G G+P +R H
Sbjct: 613 RILEEGIAIRPSDVDVVWVYGYGWPVWRGGPCFH 646
>gi|51594622|ref|YP_068813.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pseudotuberculosis IP 32953]
gi|186893623|ref|YP_001870735.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pseudotuberculosis PB1/+]
gi|81640677|sp|Q66FR8.1|FADB_YERPS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|254788585|sp|B2K0Z6.1|FADB_YERPB RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|51587904|emb|CAH19507.1| fatty acid oxidation complex alpha subunit [Yersinia
pseudotuberculosis IP 32953]
gi|186696649|gb|ACC87278.1| fatty oxidation complex, alpha subunit FadB [Yersinia
pseudotuberculosis PB1/+]
Length = 729
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ T K V +A +GLVDAVV P +LV +A ++ + W A + K+EPL
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + + A + P+ + +EA G L E F L S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++LV IF + G+A ++ A+LG G+MG GIA L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++NE L+ G+ L ++++GK+ K ++ + LDY + +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E +LASNTSTI ++ + + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHQMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EI+R +TS + + ++ ++ KTPIVV +C GF VNR+ FPY +LV G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A FPER K + +M +++R
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ +GFY Y + K P E + ++K + I + S++DI+ P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI AA+ D+A V G+GFPP+ F
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVF 672
>gi|407792143|ref|ZP_11139214.1| multifunctional fatty acid oxidation complex subunit alpha
[Gallaecimonas xiamenensis 3-C-1]
gi|407198000|gb|EKE68045.1| multifunctional fatty acid oxidation complex subunit alpha
[Gallaecimonas xiamenensis 3-C-1]
Length = 716
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 169/517 (32%), Positives = 255/517 (49%), Gaps = 20/517 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVA------TLYKTD 54
++ T K + + A LGLVDAVVAP +L A A + + W + K D
Sbjct: 166 LITTGKDNRADAALKLGLVDAVVAPEKLFDAAIAMAKSAIAGKLDWQGRRAAKTSALKLD 225
Query: 55 KIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLR 114
K+E AQA K P P+ + +EA G L E + F KL +
Sbjct: 226 KLEAGMSFSTATGMVAAQAGKHYP---APMTAVKGIEAAARMGRDEALAIENQGFVKLAK 282
Query: 115 SETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
+E +L+ IF + G A V K A+LG G+MG GIA + P+I
Sbjct: 283 TEVATALIGIFLNDQFIKGK--AKKAGKAAHAVNKAAVLGAGIMGGGIAYQSASTGTPII 340
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K++N+K L G+ L ++++G++ K ++ + L Y+S KDV++V+EA+
Sbjct: 341 MKDINDKALHLGLSEASKLLNKQLERGRINGAKMAGVLNSIVPSLSYDSVKDVNIVVEAV 400
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
+EN +K + A++E I+ SNTSTI +N + + +R G HFF+P H MPL
Sbjct: 401 VENPKVKASVLAEVEGVVSEDAIITSNTSTISINQLAKSLKKPERFCGMHFFNPVHRMPL 460
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+E++R TS + + ++ K+ K+PIVV +C GF VNR+ FPY LLV G D
Sbjct: 461 VEVIRGENTSEETVATVVAYAAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSLLVRDGADF 520
Query: 355 YLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKR 411
+D+ + K FG PMGP L D+VG E FP R K+ I +M E++R
Sbjct: 521 QAVDKVMEKQFGWPMGPAYLLDVVGIDTGHHAQAVMAEGFPTRMSKTEKDAIDVMFENQR 580
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGV-AIDPKFAKLSEKDIVEMIFFPV 470
G+ KGFY+Y E ++ P E A S + A+ + S +I+ P+
Sbjct: 581 FGQKNGKGFYVYTEDKRGKPKKEA-----TAESYELLKAVVKAQGEFSPDEIINRTMLPM 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
+ E R EGI A+ D+ V G+GFPP+R F
Sbjct: 636 IIETVRCLEEGIIASPAEADMGLVYGLGFPPFRGGVF 672
>gi|359439042|ref|ZP_09229022.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Pseudoalteromonas sp.
BSi20311]
gi|359446107|ref|ZP_09235809.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Pseudoalteromonas sp.
BSi20439]
gi|358026276|dbj|GAA65271.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Pseudoalteromonas sp.
BSi20311]
gi|358040037|dbj|GAA72058.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Pseudoalteromonas sp.
BSi20439]
Length = 707
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 268/531 (50%), Gaps = 30/531 (5%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
MLT K ++ ++A G++D V + L+ A+++A ++P A K DKI L E
Sbjct: 166 MLTGKQIRPKQAKKAGVLDDCVPQSVLLKVAKEFA----AKKKPQ-AKEPKLDKISKLLE 220
Query: 62 ARE-----IFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
+ IFK A+ +K + P+ I V A V + EAE F L+ S
Sbjct: 221 SNPFGRNFIFKKAKENVLKKTGGHYPAPLAIIKAVRASVELDEMKAYKTEAEGFATLVMS 280
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
+ K+L IFFA K D AP + K A+LGGGLMG+GIA + + + PV
Sbjct: 281 DESKALRGIFFATTEMKKEWRNDD---APA-ISKTAVLGGGLMGAGIAHVSAVKAKLPVR 336
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+V E+ + + L R+K+ M++ + T++ +TG DY FK +D+VIEA+
Sbjct: 337 IKDVAEQGISNAMNYTYKILDKRLKRRIMSKADMQLTMNRITGTTDYSGFKYIDLVIEAV 396
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++ LKQ + AD+E+ C + I ASNTS++ ++ I + + ++G H+FSP MPL
Sbjct: 397 FEDLELKQGMVADVEQQCQANTIFASNTSSLPISQIAAKAERPENVIGLHYFSPVEKMPL 456
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+ TS + I +++ +K KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 457 VEIIPHEGTSQETIARVVNFARKQGKTPIVVKDMAGFYVNRILAPYLNEAANLMLAGEPI 516
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID A+ +FG P+GP L D VG + + ER M + KR G
Sbjct: 517 EKIDAALVEFGFPVGPLALLDEVGIDIGSKIAPILEKELGERFKGPDAFSRMIDSKRLGR 576
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T +GFY YD++ KK E + GV P +L++ +I + ++NEA
Sbjct: 577 KTGRGFYEYDKKG--------KKVDESVYELLGVTPAP---RLNKNEIAKRCVSQMLNEA 625
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR---FVTFIHRGFSKSSSCFKNL 522
R +GI D DI ++ G+GFPP+ F G SK SS L
Sbjct: 626 ARCLDDGIIASPRDGDIGAIFGIGFPPFLGGPFSYMDKLGASKISSDMSTL 676
>gi|153947422|ref|YP_001399280.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pseudotuberculosis IP 31758]
gi|166971645|sp|A7FDF2.1|FADB_YERP3 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|152958917|gb|ABS46378.1| fatty oxidation complex, alpha subunit FadB [Yersinia
pseudotuberculosis IP 31758]
Length = 729
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ T K V +A +GLVDAVV P +LV +A ++ + W A + K+EPL
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + + A + P+ + +EA G L E F L S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++LV IF + G+A ++ A+LG G+MG GIA L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++NE L+ G+ L ++++GK+ K ++ + LDY + +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E +LASNTSTI ++ + + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EI+R +TS + + ++ ++ KTPIVV +C GF VNR+ FPY +LV G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A FPER K + +M +++R
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ +GFY Y + K P E + ++K + I + S++DI+ P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI AA+ D+A V G+GFPP+ F
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVF 672
>gi|398852304|ref|ZP_10608967.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM80]
gi|398244491|gb|EJN30041.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM80]
Length = 715
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 169/516 (32%), Positives = 260/516 (50%), Gaps = 33/516 (6%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A + VDAVVAP +L+ A D R+P K DK+
Sbjct: 170 SGKENRPEDALKVSAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F KL
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLA 282
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
++ +SL+ +F + K D + VK+ A+LG G+MG GIA P+
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPI 340
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
++K++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA
Sbjct: 341 LMKDINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNAIRPTLSYGDFGHVDLVVEA 400
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
++EN +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MP
Sbjct: 401 VVENPKVKQAVLAEVEGQVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMP 460
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 461 LVEVIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVD 520
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKR 411
ID+ + KFG PMGP L D+VG E FP+R + I ++ E KR
Sbjct: 521 FVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKR 580
Query: 412 AGETTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
G+ KGFY Y+ +K DP V + ++ I + +++++DI+ +
Sbjct: 581 LGQKNGKGFYAYEADKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMM 632
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
P+ E R +GI AA+ D+ V G+GFPP+R
Sbjct: 633 IPLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|398860105|ref|ZP_10615763.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM79]
gi|398235310|gb|EJN21141.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM79]
Length = 715
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 168/513 (32%), Positives = 257/513 (50%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP +L A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPEKLQEAALNLLKGAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + ++ E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDE----RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++K DP V + ++ + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKQKKVADPSVLEVLKP------IVFEQR--EVTDEDIINWMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|421619509|ref|ZP_16060463.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri KOS6]
gi|409778540|gb|EKN58239.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri KOS6]
Length = 715
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 258/513 (50%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A + VDAVVAP QL V A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVRAVDAVVAPEQLQAAALDLVKRAISGELDYKAKRQPKLDKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G ++ EA F KL ++
Sbjct: 229 EQMMAFETSKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKAIEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SLV +F + + K D R VK A+LG G+MG GIA + P+++K
Sbjct: 286 VAQSLVGLFLSDQELKKKAKAYDK--QARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T EK + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLDEASKLLGKRVEKGRLTPEKMAQALNAIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + A++E + I+ASNTSTI ++ + + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKHAVLAEVEGHVREDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS I + KK+ K+P+VV +C GF VNR+ FPY + G D
Sbjct: 464 VIRGEKTSETAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFAR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGE 414
D+ + KFG PMGP L D+VG E FP+R + +M E R G+
Sbjct: 524 ADKVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDTKTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++ P DP+ + ++ I + +LS++DIV + P+
Sbjct: 584 KNGKGFYAYEMDKRGKPKKVVDPQAYELLK--------PIVAETRELSDEDIVNYMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|75462909|sp|Q9AHY3.2|FADB_PSEPU RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|57546096|gb|AAK18167.2|AF290949_1 FadB [Pseudomonas putida]
Length = 715
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 259/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVGAVDAVVAPELLQAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVDKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + A + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDAAVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|390567210|ref|ZP_10247558.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
gi|389940910|gb|EIN02691.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
Length = 706
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 268/504 (53%), Gaps = 8/504 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+ML+ + V +EAH+LGLVD V + +++ + +L+ + P V D +
Sbjct: 157 LMLSGRHVGAKEAHALGLVDLVGETDDVLAEGLAYVQALLDAQAP-VRRTRDADGLADRA 215
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+R + ARA++ K++ L P+ +D V+A + GL+ E + F + L S
Sbjct: 216 ASRAAIEAARAESSKKSHGLFSPLKIVDAVQAALELPFDDGLRHERQLFLQCLDSPQRAG 275
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H F A+R K P + PR++ V ++GGG MG+GIA A++ + PV + E ++
Sbjct: 276 LIHAFLAEREVLKAPETRNA--KPRKIASVGVVGGGTMGAGIAVAVLDAGLPVTMIERDD 333
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L G+ + + + KG+MT E ++ G Y++ D+VIEA+ E +++
Sbjct: 334 VSLARGLAHIEKVYDNLIAKGRMTPEAKAAVLARWNGSTSYDALGTADLVIEAVFEEMTV 393
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K +FA L++ C P +LA+NTS +D++ I +VG HFFSPA++M LLE+V
Sbjct: 394 KHAVFAKLDRVCKPGAVLATNTSYLDIDAIAASVSRPGDVVGLHFFSPANIMKLLEVVVP 453
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
Q S V+ D+ KK++K P+ G C GF NR+ Y AA ++E G Y IDRA
Sbjct: 454 AQVSADVVATAFDLAKKLRKVPVRAGVCDGFIGNRVLAIYRAAADHMMEDGASPYQIDRA 513
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG PMGPF++ADL G + AT + + I + E G+ T +G+
Sbjct: 514 VRAFGFPMGPFQVADLAGGDIGWATRKRRAATRDPQQRYVQIADRICERGWFGQKTGRGY 573
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFA 479
Y+Y D R PDPEV+ I+ R +GV P+ S+++I+ ++NE V
Sbjct: 574 YVYADGARTGKPDPEVESIIDAERERAGVT--PR--AFSDEEIMRRYMAAMINEGANVVH 629
Query: 480 EGIAVKAADLDIASVMGMGFPPYR 503
+ IA++ D+D+ + G GFP +R
Sbjct: 630 QRIALRPLDVDVTFLYGYGFPRHR 653
>gi|22124379|ref|NP_667802.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pestis KIM10+]
gi|45443033|ref|NP_994572.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pestis biovar Microtus str. 91001]
gi|108809427|ref|YP_653343.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pestis Antiqua]
gi|108810364|ref|YP_646131.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pestis Nepal516]
gi|145600636|ref|YP_001164712.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pestis Pestoides F]
gi|153997175|ref|ZP_02022308.1| fatty acid oxidation complex alpha subunit [Yersinia pestis
CA88-4125]
gi|162418187|ref|YP_001606393.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pestis Angola]
gi|165926281|ref|ZP_02222113.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165939172|ref|ZP_02227723.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis biovar
Orientalis str. IP275]
gi|166012145|ref|ZP_02233043.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166213585|ref|ZP_02239620.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167398557|ref|ZP_02304081.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167421076|ref|ZP_02312829.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167426216|ref|ZP_02317969.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167468672|ref|ZP_02333376.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis FV-1]
gi|170026144|ref|YP_001722649.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pseudotuberculosis YPIII]
gi|218930770|ref|YP_002348645.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pestis CO92]
gi|229839450|ref|ZP_04459609.1| fatty acid oxidation complex alpha subunit [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229896684|ref|ZP_04511850.1| fatty acid oxidation complex alpha subunit [Yersinia pestis
Pestoides A]
gi|229900014|ref|ZP_04515151.1| fatty acid oxidation complex alpha subunit [Yersinia pestis biovar
Orientalis str. India 195]
gi|229900539|ref|ZP_04515668.1| fatty acid oxidation complex alpha subunit [Yersinia pestis
Nepal516]
gi|270488894|ref|ZP_06205968.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis KIM
D27]
gi|294505433|ref|YP_003569495.1| fatty acid oxidation complex alpha subunit [Yersinia pestis
Z176003]
gi|384123902|ref|YP_005506522.1| fatty acid oxidation complex alpha subunit [Yersinia pestis
D106004]
gi|384127763|ref|YP_005510377.1| fatty acid oxidation complex alpha subunit [Yersinia pestis
D182038]
gi|384138376|ref|YP_005521078.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pestis A1122]
gi|420548954|ref|ZP_15046710.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-01]
gi|420554309|ref|ZP_15051486.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-02]
gi|420559928|ref|ZP_15056364.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-03]
gi|420565308|ref|ZP_15061203.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-04]
gi|420570339|ref|ZP_15065776.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-05]
gi|420576007|ref|ZP_15070902.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-06]
gi|420581316|ref|ZP_15075729.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-07]
gi|420586713|ref|ZP_15080613.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-08]
gi|420591794|ref|ZP_15085183.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-09]
gi|420597173|ref|ZP_15090020.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-10]
gi|420602871|ref|ZP_15095079.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-11]
gi|420608262|ref|ZP_15099971.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-12]
gi|420613664|ref|ZP_15104810.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-13]
gi|420619014|ref|ZP_15109473.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-14]
gi|420624325|ref|ZP_15114261.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-15]
gi|420629309|ref|ZP_15118783.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-16]
gi|420634521|ref|ZP_15123452.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-19]
gi|420639742|ref|ZP_15128155.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-25]
gi|420645188|ref|ZP_15133134.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-29]
gi|420650506|ref|ZP_15137926.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-32]
gi|420656126|ref|ZP_15142986.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-34]
gi|420661574|ref|ZP_15147846.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-36]
gi|420666930|ref|ZP_15152673.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-42]
gi|420671784|ref|ZP_15157101.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-45]
gi|420677124|ref|ZP_15161959.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-46]
gi|420682688|ref|ZP_15166975.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-47]
gi|420688099|ref|ZP_15171790.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-48]
gi|420693366|ref|ZP_15176400.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-52]
gi|420699091|ref|ZP_15181442.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-53]
gi|420704977|ref|ZP_15186090.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-54]
gi|420710242|ref|ZP_15190813.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-55]
gi|420715755|ref|ZP_15195700.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-56]
gi|420721301|ref|ZP_15200440.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-58]
gi|420726731|ref|ZP_15205239.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-59]
gi|420732230|ref|ZP_15210185.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-60]
gi|420737220|ref|ZP_15214692.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-61]
gi|420742702|ref|ZP_15219619.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-63]
gi|420748589|ref|ZP_15224565.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-64]
gi|420753847|ref|ZP_15229294.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-65]
gi|420759835|ref|ZP_15234076.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-66]
gi|420765004|ref|ZP_15238673.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-71]
gi|420770235|ref|ZP_15243355.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-72]
gi|420775216|ref|ZP_15247874.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-76]
gi|420780834|ref|ZP_15252806.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-88]
gi|420786467|ref|ZP_15257726.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-89]
gi|420791494|ref|ZP_15262254.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-90]
gi|420797063|ref|ZP_15267265.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-91]
gi|420802161|ref|ZP_15271844.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-92]
gi|420807494|ref|ZP_15276683.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-93]
gi|420812900|ref|ZP_15281520.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-94]
gi|420818363|ref|ZP_15286479.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-95]
gi|420823710|ref|ZP_15291256.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-96]
gi|420828777|ref|ZP_15295824.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-98]
gi|420834363|ref|ZP_15300866.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-99]
gi|420839307|ref|ZP_15305332.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis
PY-100]
gi|420844502|ref|ZP_15310048.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis
PY-101]
gi|420850150|ref|ZP_15315120.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis
PY-102]
gi|420855890|ref|ZP_15319953.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis
PY-103]
gi|420860978|ref|ZP_15324448.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis
PY-113]
gi|421765288|ref|ZP_16202074.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pestis INS]
gi|24636831|sp|Q8ZAN0.1|FADB_YERPE RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|118573322|sp|Q1C2C4.1|FADB_YERPA RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|118573323|sp|Q1CN99.1|FADB_YERPN RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|166971646|sp|A4TR27.1|FADB_YERPP RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|254788586|sp|A9R754.1|FADB_YERPG RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|254788587|sp|B1JP63.1|FADB_YERPY RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|21957158|gb|AAM84053.1|AE013646_13 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase;
3-hydroxybutyryl-CoA epimerase;
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase;
enoyl-CoA hydratase [Yersinia pestis KIM10+]
gi|45437900|gb|AAS63449.1| fatty acid oxidation complex alpha subunit [Yersinia pestis biovar
Microtus str. 91001]
gi|108774012|gb|ABG16531.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Yersinia pestis Nepal516]
gi|108781340|gb|ABG15398.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Yersinia pestis Antiqua]
gi|115349381|emb|CAL22353.1| fatty acid oxidation complex alpha subunit [Yersinia pestis CO92]
gi|145212332|gb|ABP41739.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Yersinia pestis Pestoides F]
gi|149289481|gb|EDM39559.1| fatty acid oxidation complex alpha subunit [Yersinia pestis
CA88-4125]
gi|162351002|gb|ABX84950.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis
Angola]
gi|165912945|gb|EDR31571.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis biovar
Orientalis str. IP275]
gi|165921805|gb|EDR39002.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165988946|gb|EDR41247.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166205258|gb|EDR49738.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166961205|gb|EDR57226.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167051061|gb|EDR62469.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167054735|gb|EDR64539.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169752678|gb|ACA70196.1| fatty oxidation complex, alpha subunit FadB [Yersinia
pseudotuberculosis YPIII]
gi|229682558|gb|EEO78645.1| fatty acid oxidation complex alpha subunit [Yersinia pestis
Nepal516]
gi|229686794|gb|EEO78873.1| fatty acid oxidation complex alpha subunit [Yersinia pestis biovar
Orientalis str. India 195]
gi|229695816|gb|EEO85863.1| fatty acid oxidation complex alpha subunit [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229700327|gb|EEO88360.1| fatty acid oxidation complex alpha subunit [Yersinia pestis
Pestoides A]
gi|262363498|gb|ACY60219.1| fatty acid oxidation complex alpha subunit [Yersinia pestis
D106004]
gi|262367427|gb|ACY63984.1| fatty acid oxidation complex alpha subunit [Yersinia pestis
D182038]
gi|270337398|gb|EFA48175.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis KIM
D27]
gi|294355892|gb|ADE66233.1| fatty acid oxidation complex alpha subunit [Yersinia pestis
Z176003]
gi|342853505|gb|AEL72058.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pestis A1122]
gi|391421390|gb|EIQ84090.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-01]
gi|391421463|gb|EIQ84155.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-02]
gi|391421660|gb|EIQ84333.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-03]
gi|391436343|gb|EIQ97309.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-04]
gi|391437644|gb|EIQ98485.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-05]
gi|391441311|gb|EIR01813.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-06]
gi|391453443|gb|EIR12760.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-07]
gi|391453599|gb|EIR12898.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-08]
gi|391455508|gb|EIR14620.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-09]
gi|391469291|gb|EIR27081.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-10]
gi|391469989|gb|EIR27703.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-11]
gi|391471451|gb|EIR29015.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-12]
gi|391485144|gb|EIR41322.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-13]
gi|391486650|gb|EIR42666.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-15]
gi|391486752|gb|EIR42759.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-14]
gi|391501330|gb|EIR55748.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-16]
gi|391501505|gb|EIR55904.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-19]
gi|391506403|gb|EIR60327.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-25]
gi|391517222|gb|EIR70049.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-29]
gi|391518404|gb|EIR71126.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-34]
gi|391519109|gb|EIR71769.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-32]
gi|391531662|gb|EIR83139.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-36]
gi|391534444|gb|EIR85624.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-42]
gi|391536817|gb|EIR87766.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-45]
gi|391550041|gb|EIR99694.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-46]
gi|391550250|gb|EIR99884.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-47]
gi|391550541|gb|EIS00147.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-48]
gi|391564777|gb|EIS12948.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-52]
gi|391566149|gb|EIS14176.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-53]
gi|391569716|gb|EIS17269.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-54]
gi|391579751|gb|EIS25835.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-55]
gi|391581369|gb|EIS27263.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-56]
gi|391591795|gb|EIS36316.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-58]
gi|391595334|gb|EIS39391.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-60]
gi|391596027|gb|EIS40008.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-59]
gi|391609830|gb|EIS52188.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-61]
gi|391610192|gb|EIS52510.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-63]
gi|391611610|gb|EIS53770.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-64]
gi|391623245|gb|EIS64069.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-65]
gi|391626238|gb|EIS66622.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-66]
gi|391633579|gb|EIS72963.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-71]
gi|391635263|gb|EIS74448.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-72]
gi|391645574|gb|EIS83439.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-76]
gi|391648590|gb|EIS86084.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-88]
gi|391652921|gb|EIS89942.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-89]
gi|391658557|gb|EIS94952.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-90]
gi|391666195|gb|EIT01696.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-91]
gi|391675453|gb|EIT09969.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-93]
gi|391675833|gb|EIT10314.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-92]
gi|391676058|gb|EIT10512.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-94]
gi|391689657|gb|EIT22764.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-95]
gi|391691710|gb|EIT24614.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-96]
gi|391693388|gb|EIT26141.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-98]
gi|391706796|gb|EIT38200.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis PY-99]
gi|391709972|gb|EIT41091.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis
PY-100]
gi|391710449|gb|EIT41511.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis
PY-101]
gi|391722747|gb|EIT52519.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis
PY-102]
gi|391722923|gb|EIT52676.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis
PY-103]
gi|391726127|gb|EIT55518.1| fatty oxidation complex, alpha subunit FadB [Yersinia pestis
PY-113]
gi|411173718|gb|EKS43760.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia pestis INS]
Length = 729
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ T K V +A +GLVDAVV P +LV +A ++ + W A + K+EPL
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + + A + P+ + +EA G L E F L S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++LV IF + G+A ++ A+LG G+MG GIA L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++NE L+ G+ L ++++GK+ K ++ + LDY + +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E +LASNTSTI ++ + + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EI+R +TS + + ++ ++ KTPIVV +C GF VNR+ FPY +LV G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A FPER K + +M +++R
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ +GFY Y + K P E + ++K + I + S++DI+ P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI AA+ D+A V G+GFPP+ F
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVF 672
>gi|398962158|ref|ZP_10679145.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM30]
gi|398151437|gb|EJM39986.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM30]
Length = 715
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 254/506 (50%), Gaps = 27/506 (5%)
Query: 11 EEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
E+A + VDAVVAP +L+ A D R+P + L K + IE +
Sbjct: 177 EDALKVSAVDAVVAPEKLQEAALELIKRAISGEFDFKAKRQPKLEKL-KLNAIEQMMAFE 235
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F QA PN P+ I ++ G L+ EA F KL ++ +SL+
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K D + VK+ A+LG G+MG GIA P+++K++NE +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++EN +KQ
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S I + KK+ K PIVV +C GF VNR+ FPY LV G D ID+ + K
Sbjct: 471 SELAIATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG E FP+R + I ++ E KR G+ KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFY 590
Query: 422 LYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y+ +K DP V + ++ I + +++++DI+ + P+ E R
Sbjct: 591 AYEADKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMMIPLCLETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
+GI AA+ D+ V G+GFPP+R
Sbjct: 643 LEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|326402430|ref|YP_004282511.1| putative fatty acid oxidation complex alpha subunit [Acidiphilium
multivorum AIU301]
gi|325049291|dbj|BAJ79629.1| putative fatty acid oxidation complex alpha subunit [Acidiphilium
multivorum AIU301]
Length = 698
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 268/514 (52%), Gaps = 27/514 (5%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRP--WVATLYKTDKIEPL 59
+++ K + + A + GL+DA+V S Q A+D P V ++DKI
Sbjct: 154 IVSGKMIGAKAALADGLIDAIV------SDPVQGAIDFAHTVDPAKLVRVRDRSDKIAAA 207
Query: 60 GEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
F+ A A+A K+ + P C++ V G + E + F +L+ + +
Sbjct: 208 KADPSAFEAAAAEATKRLKGVEAPAACVEAVRNSFTLPFDEGARAEQQAFMRLVVGDQSR 267
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+ H+FFA+R K+PG+ + ++ + ++GGG MG GIA + PV + E +
Sbjct: 268 AQRHVFFAEREAQKIPGIGPE-VKGAKIGRAVVIGGGTMGGGIAMNFANAGIPVTIVETD 326
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
E L G+ RVR V++G + EK ++L +G D+ + D+VIEA+ E +
Sbjct: 327 EAALSRGLDRVRGTYDVSVQRGALPAGTTEKRMALFSGSTDWGVMAEADIVIEAVFEELG 386
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
LK+++FA ++ P +LA+NTST+D++ I T ++G HFFSPA+VM LLEIVR
Sbjct: 387 LKKEVFARIDGIARPGALLATNTSTLDVDAIAAATKRPGDVLGMHFFSPANVMKLLEIVR 446
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
++S Q I + +GK + K P+VVGNC GF NRM T L+ G +D
Sbjct: 447 GKESSAQSIATAIAVGKTLGKVPVVVGNCDGFVGNRMLARRTIECERLMLEGALPQQVDA 506
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI---MQEDKRAGETT 416
+ FG PMGPF + DL G V + R ++ P+ + E R G+ T
Sbjct: 507 VVKAFGFPMGPFAMGDLAGLDV----------GWRIRKHRGATAPVSDALCEMGRFGQKT 556
Query: 417 RKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
+G+Y+Y+ R +PDPEV+ I + + G+ +S+++I+E + +P++NEA
Sbjct: 557 GRGYYIYENGSRVPTPDPEVEALISEKATALGI----TRRAISDQEILERMTYPMINEAA 612
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIH 509
R+ EGIA++ +D+D+ V G G+P +R H
Sbjct: 613 RILEEGIAIRPSDVDVVWVYGYGWPVWRGGPCFH 646
>gi|343513259|ref|ZP_08750368.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
scophthalmi LMG 19158]
gi|342793564|gb|EGU29356.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
scophthalmi LMG 19158]
Length = 704
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/505 (31%), Positives = 266/505 (52%), Gaps = 20/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++LT K ++ ++A LG+VDA VAP L+ A+Q+ D + + V+T K + G
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVAPTILLEVAKQFVED-KDKAKHKVST--KEKLMAQTG 224
Query: 61 EAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R++ A+ +Q +P ++V+ G+ G GL EAE F +L+ S
Sbjct: 225 FGRKVIFEQAAKKTQQKTRGNYPATEAILEVIRYGLEHGFTKGLAYEAERFGELVMSNES 284
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
K+L IFFA K G P VK++A+LGGGLMG+GI+ + + PV +K+
Sbjct: 285 KALRSIFFATTEMKKEHGSD---AEPSSVKRIAVLGGGLMGAGISHVTVAKAKVPVRIKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
V+ + + + + K+ +++ + + + L+G +D+ SF D+VIEA+ E+
Sbjct: 342 VSNDGVLNALNYNFKLFEKQRKRRILSKAQLQSKMQQLSGGIDFISFNHTDVVIEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQQ+ AD+E+ P I A+NTS++ ++ I E+ + ++G H+FSP MPL+E+
Sbjct: 402 LALKQQMVADIEQNAKPDTIFATNTSSLPIHQIAEQAARPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS Q I ++++ +K KTPIVV +C GF VNR+ PY A ++ G + +
Sbjct: 462 IPHQTTSDQTISTVVELARKQGKTPIVVKDCAGFYVNRILAPYMNEAAHILLTGEPIEQL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ G P+GP L D VG + + R + + D R G +
Sbjct: 522 DGALLDAGFPVGPITLLDEVGVDIGAKIMPILVNELGPRFQGPAVFDTLLNDGRKGRKSG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
KGFY Y + D +V K + K +++ P+ +K++ +++ P++NEA R
Sbjct: 582 KGFYTYKGK-----DKQVDKSVYKLLNLT-----PE-SKMASQEMAMRCLLPMLNEAVRC 630
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EGI D DI ++ G+GFPP+
Sbjct: 631 LDEGIIRSPRDGDIGAIFGIGFPPF 655
>gi|149731446|ref|XP_001498786.1| PREDICTED: peroxisomal bifunctional enzyme [Equus caballus]
Length = 723
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 272/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + +EA LG++D +V + + + A++ + LE RR LY ++
Sbjct: 151 LITSGRCILADEALKLGILDEIVNSDPVEEAIKLAQRVSDQPLESRR-----LY-NKPVQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A + RKQ P C+ V+A V G++KE E F LL S
Sbjct: 205 SLPNMDTIFSEALLKMRKQYPGCLSQETCVRAVQAAVQYPYEVGIKKEEELFMYLLESGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + F A+R K G + +PR + ++G G MG GI +L + PVI
Sbjct: 265 ARALQYAFLAERNARKWSTPSGASWKTASPRPISSAGVVGLGTMGRGIVISLAKAKIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
E ++K LE + + L+ V K + + + LT + + DVD+VIEA+
Sbjct: 325 AVESDKKQLEIANKIITSALEREVSKMQQSGHPWSGPKPRLTTAM--KELSDVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E ++LK+++FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 383 FEEMNLKKKVFAELSAVCKPEAFLCTNTSALDVDEIASSTNRPHLVIGTHFFSPAHVMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKI+K +VVGNC F NRM Y + L+E G+
Sbjct: 443 LEVIPSRYSSPTTIATVMNLSKKIQKFGVVVGNCFSFVGNRMLNSYYNQTYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
ID+ + +FG +GPFR++DL G V TG P R + IP
Sbjct: 503 EEIDQVLEEFGFKLGPFRVSDLAGLDVGWKSRKGRGLTGPTLPPGTPARKRDNRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ + PDP + KF+ + R I P+ +S+ +
Sbjct: 563 DMLCELGRFGQKTGKGWYQYDKPLGKIHKPDPWLSKFLSQYRET--YHIVPRI--ISQDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ +GIA +D+ + G +P ++ + + +
Sbjct: 619 ILERCLYSLINEAFRILGDGIAASPEHIDVIYLHGYKWPRHKGGPMFYASTVGLPTVLEK 678
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 679 LQKYYRQ 685
>gi|381394813|ref|ZP_09920524.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379329420|dbj|GAB55657.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 707
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 177/506 (34%), Positives = 260/506 (51%), Gaps = 13/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT V+ +A G+VD V + L+ A A ++ R VA + IE
Sbjct: 165 MMLTGNSVRASQAKKYGIVDDCVPESILMDVAVGLAGQAVKTR--TVAKSMVSKVIESTS 222
Query: 61 EAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I F AR Q Q N P+ ID +E G+ + + G EA F KL+ +
Sbjct: 223 FGRGIMFSKAREQTMAQTKGNYPAPMYIIDCIELGLKNREK-GYATEASLFGKLVMTPES 281
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
K L +FFA K G GL P+ +KK+ +LGGGLMG GIA + ++ PV +K+
Sbjct: 282 KQLRGVFFATTEMKKESGAD--GLKPKVIKKIGVLGGGLMGGGIAFVSATKASVPVRIKD 339
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+NE + + + L +VKK M + ++ ++ +TG LDY +K VDM IEA+ E+
Sbjct: 340 INEHGIASAMKYSYDILNKKVKKRFMLLSQMQRQMANITGCLDYSGYKSVDMAIEAVFED 399
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
V+LKQ + A++E++C + I ASNTS+I + I + + +VG H+FSP MPL+E+
Sbjct: 400 VNLKQTMVAEIEEHCHENTIFASNTSSIPIADIAAKAKRPENVVGLHYFSPVDKMPLVEV 459
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TSPQ I + K+ KTPIVV + GF VNR+ PY A L G + I
Sbjct: 460 IGHEGTSPQTIATTVGFAKRQGKTPIVVKDGAGFYVNRILAPYMSEAGFLAMEGQPINAI 519
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GPF+L D VG V + F ER + E+ R G+
Sbjct: 520 DQALVKFGFPVGPFKLLDEVGIDVGTKIIPILMNQFGERFASPDAFEKLLENDRKGKKNG 579
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
GFY Y KA+ KK E ++ G+ +K ++ + E ++NEA
Sbjct: 580 SGFYKYS--GKANSKDSGKKVDESVYTLLGIT---PVSKYTDSSVAERCLLLMLNEAAMC 634
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EG+ A D DI ++ G+GFPP+R
Sbjct: 635 LEEGVIRSARDGDIGAIFGIGFPPFR 660
>gi|365971501|ref|YP_004953062.1| Fatty acid oxidation complex subunit alpha [Enterobacter cloacae
EcWSU1]
gi|365750414|gb|AEW74641.1| Fatty acid oxidation complex subunit alpha [Enterobacter cloacae
EcWSU1]
Length = 715
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 167/507 (32%), Positives = 260/507 (51%), Gaps = 20/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LT K ++ +A GLVD VV L+ A + AL + +RP + + PLG
Sbjct: 167 MILTGKQLRARQALKAGLVDEVVPHAILLEAAVELALKGRQAKRPL--PVRERVLAGPLG 224
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ +K N ++V+E G+ G +G EA+ F +L + ++
Sbjct: 225 RTLLFSMAGKKTEQKTKGNYPAAKRILEVIEVGLSQGSSSGYAAEAKAFGELAMTPQSQA 284
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L +IFFA K PG ++ AP V G G TA PV +K++N
Sbjct: 285 LRNIFFASTEVKKDPG-SEAQPAPLHAIGVLGGGLMGGGISFVTA-SKGKLPVRIKDINA 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
K + + NL +VK+ + + +KT++L++G DY F D+VIEA+ E+++L
Sbjct: 343 KGINHALQYSWQNLDQKVKRRHIKANERDKTLALISGTTDYSGFAHRDLVIEAVFEDLAL 402
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQ+ AD+E++C PH I ASNTS++ + I R ++++G H+FSP MPL+E++
Sbjct: 403 KQQMVADVEQHCAPHTIFASNTSSLPIGDIAARAQRPEQVIGLHYFSPVEKMPLVEVIPH 462
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TSPQ + ++ + K KTPIVV + GF VNR+ PY A L+ G + +D A
Sbjct: 463 ASTSPQTVATVVKLAKMQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEA 522
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRAGET 415
+ KFG P+GP +L D VG I TG + I + + +R + + I+ + +D R G
Sbjct: 523 LVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEDAYGDRFSPPANIVSAILKDDRKGRK 578
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
+GFYLY + + S KK ++ S+ G+ KLS E ++NEA
Sbjct: 579 NERGFYLYGAKGRKS-----KKQVDP--SVYGLIPTTGQGKLSPVQCAERCVMMMLNEAA 631
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
R F E + A D DI +V G+GFPP+
Sbjct: 632 RCFGEQVIKSARDGDIGAVFGIGFPPF 658
>gi|410631340|ref|ZP_11342017.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
gi|410149163|dbj|GAC18884.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
Length = 714
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 267/505 (52%), Gaps = 15/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRR-PWVATLYKTDKIEPL 59
MMLT V+ ++A G+VD +V + L+ A + A R P + + K + +
Sbjct: 174 MMLTGASVRAKQAKKYGIVDDMVPQSILLDVAIEMAKKPKPKRNGPKLDLMGKFLENTSV 233
Query: 60 GEAREIFKFARAQ-ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
G +F AR Q A K N P + ID +E G+ G R GL+ EA+ F L+ S
Sbjct: 234 GR-NLMFNQARKQTASKTQGNYPSPELIIDCIETGLSQGFRKGLEVEAKHFGNLVMSSES 292
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
+L +FFA K GV G+ P R+KKV +LGGGLMG GIA + P +K+
Sbjct: 293 AALRSLFFATTDMKKETGVQ--GVQPARLKKVGVLGGGLMGGGIAFVTATKAGLPARIKD 350
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + + I L +VK+G M + +K ++LLTG +DY F D D+VIEA+ E+
Sbjct: 351 IRSEGIANAIKYSFDILNKKVKRGFMQKMAMQKQMALLTGSIDYSGFSDADVVIEAVFED 410
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQ + A++E+ C H I ASNTS+I ++ I + ++++G H+FSP MPL E+
Sbjct: 411 LTLKQNMVAEVEENCAEHTIFASNTSSIPISQIAAKAKRPEQVIGLHYFSPVDKMPLAEV 470
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TS Q I +++ KK KTPIVV + GF VNR+ PY A ++ G + I
Sbjct: 471 IAHEKTSDQTISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNEAAEVLLSGEPIDHI 530
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+++ KFG P+GP +L D VG V G F +R + + D R G+ +
Sbjct: 531 DKSLVKFGFPVGPVKLLDEVGIDVGTKIGPILQAQFGDRFASNPGFDKILADDRKGKKNK 590
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
+GFY Y + +P EV A + + I P +K+S + I E ++NEA
Sbjct: 591 RGFYDYSGK---NPGKEV-----DASVYTLLGITPA-SKMSHEQIAERCVLLMLNEAAMC 641
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EG+ A D DI ++ G+GFPP+
Sbjct: 642 LDEGVVRNARDGDIGAIFGIGFPPF 666
>gi|443472697|ref|ZP_21062723.1| enoyl hydrase / dodecenoyl-CoA isomerase / 3-keto reductase
[Pseudomonas pseudoalcaligenes KF707]
gi|442903139|gb|ELS28552.1| enoyl hydrase / dodecenoyl-CoA isomerase / 3-keto reductase
[Pseudomonas pseudoalcaligenes KF707]
Length = 715
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 167/516 (32%), Positives = 259/516 (50%), Gaps = 33/516 (6%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A +G VDAVVAP+ LV A LD R+P + + K + I
Sbjct: 170 SGKENRAEDALKVGAVDAVVAPDLLQAGALDLVKRAISGELDFKAKRQPKLEKI-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGREKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
SL+ +F + K D R VK A+LG G+MG GIA P+++K
Sbjct: 286 VATSLIGLFLNDQELKKKAKQHDE--IARDVKLAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG+M EK + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQTGLKEAAKLLGKRVEKGRMKPEKMAEALNAIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + A++E + I+ASNTSTI ++ + + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKHAVLAEVEGHVREDAIIASNTSTISISYLAQALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY L+E G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLLEFGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DP---EVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
KGFY Y+ ++ P DP E+ K I K + +L+++DI+ +
Sbjct: 584 KNGKGFYAYETDKRGKPKKVSDPVAYEILKPIIKEQR-----------ELTDEDIINFMM 632
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 633 IPLCMETVRCLEDGIVSTAAEADMGLIYGIGFPPFR 668
>gi|426410422|ref|YP_007030521.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. UW4]
gi|426268639|gb|AFY20716.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. UW4]
Length = 715
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 255/506 (50%), Gaps = 27/506 (5%)
Query: 11 EEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKIEPLGEAR 63
E+A +G VDAVVAP +L A + D R+P + L K + IE +
Sbjct: 177 EDALKVGAVDAVVAPEKLQEAALELIKRAICGEFDYKAKRQPKLEKL-KLNAIEQMMAFE 235
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F QA PN P+ I ++ G L+ EA F KL ++ +SL+
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLIG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K D + VK+ A+LG G+MG GIA P+++K++NE +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++EN +KQ
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAEVEDQVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S + + KK+ K PIVV +C GF VNR+ FPY LV G D ID+ + K
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG E FP+R + + ++ E KR G+ KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFY 590
Query: 422 LYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y+ +K DP V + ++ + + + +++++DI+ + P+ E R
Sbjct: 591 AYETDKKGKQKKVADPSVLEVLKP------IVFEQR--EVTDEDIINWMMIPLCLETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
+GI AA+ D+ V G+GFPP+R
Sbjct: 643 LEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|424924082|ref|ZP_18347443.1| FadB [Pseudomonas fluorescens R124]
gi|404305242|gb|EJZ59204.1| FadB [Pseudomonas fluorescens R124]
Length = 715
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 254/506 (50%), Gaps = 27/506 (5%)
Query: 11 EEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
E+A + VDAVVAP +L+ A D R+P + L K + IE +
Sbjct: 177 EDALKVSAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKL-KLNAIEQMMAFE 235
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F QA PN P+ I ++ G L+ EA F KL ++ +SL+
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K D + VK+ A+LG G+MG GIA P+++K++NE +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++EN +KQ
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S I + KK+ K PIVV +C GF VNR+ FPY LV G D ID+ + K
Sbjct: 471 SELAIATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG E FP+R + I ++ E KR G+ KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFY 590
Query: 422 LYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y+ +K DP V + ++ I + +++++DI+ + P+ E R
Sbjct: 591 AYEADKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMMIPLCLETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
+GI AA+ D+ V G+GFPP+R
Sbjct: 643 LEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|343514105|ref|ZP_08751187.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
sp. N418]
gi|342800771|gb|EGU36282.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
sp. N418]
Length = 704
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 268/507 (52%), Gaps = 24/507 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW--ALDILEHRRPWVATLYKTDKIEP 58
++LT K ++ ++A LG+VDA VAP L+ A+Q+ D +H+ V+T K +
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVAPTILLEVAKQFVEGKDKAKHK---VST--KEKLMAQ 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
G R++ A+ +Q +P ++V+ G+ G GL EAE F +L+ S
Sbjct: 223 TGFGRKVIFEQAAKKTQQKTRGNYPATEAILEVIRYGLEHGFTKGLAYEAERFGELVMSN 282
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVIL 175
K+L IFFA K G P VK++A+LGGGLMG+GI+ + + PV +
Sbjct: 283 ESKALRSIFFATTEMKKEHGSD---AEPSSVKRIAVLGGGLMGAGISHVTVAKAKVPVRI 339
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K+V+ + + + + K+ +++ + + + L+G +D+ SF D+VIEA+
Sbjct: 340 KDVSNDGVLNALNYNFKLFEKQRKRRILSKAQLQSKMQQLSGGIDFISFNHTDVVIEAVF 399
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E+++LKQQ+ AD+E+ P I A+NTS++ ++ I E+ + ++G H+FSP MPL+
Sbjct: 400 EDLALKQQMVADIEQNAKPDTIFATNTSSLPIHQIAEQAARPENVIGLHYFSPVEKMPLV 459
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++ TS Q I ++++ +K KTPIVV +C GF VNR+ PY A ++ G +
Sbjct: 460 EVIPHQTTSAQTISTVVELARKQGKTPIVVKDCAGFYVNRILAPYMNEAAHILLTGEPIE 519
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGET 415
+D A+ G P+GP L D VG + + R + + +D R G
Sbjct: 520 QLDGALLDAGFPVGPITLLDEVGVDIGAKIMPILVNELGPRFQGPAVFDTLLKDGRKGRK 579
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
+ KGFY Y + D +V K + K +++ P+ +K++ +++ P++NEA
Sbjct: 580 SGKGFYTYKGK-----DKQVDKSVYKLLNLT-----PE-SKMASQEMAMRCLLPMLNEAV 628
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
R EGI D DI ++ G+GFPP+
Sbjct: 629 RCLDEGIIRSPRDGDIGAIFGIGFPPF 655
>gi|407362825|ref|ZP_11109357.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas mandelii JR-1]
Length = 715
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 254/506 (50%), Gaps = 27/506 (5%)
Query: 11 EEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
E+A +G VDAVVAP +L+ A D R+P + L K + IE +
Sbjct: 177 EDALKVGAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKL-KLNAIEQMMAFE 235
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F QA PN P+ I ++ G L+ EA F KL ++ +SL+
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLIG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K D + VK+ A+LG G+MG GIA P+++K++NE +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++EN +KQ
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S + + KK+ K PIVV +C GF VNR+ FPY LV G D ID+ + K
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG E FP+R + + ++ E KR G+ KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFY 590
Query: 422 LYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y+ +K DP V + ++ I + +++++DI+ + P+ E R
Sbjct: 591 AYETDKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMMIPLCLETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
+GI AA+ D+ V G+GFPP+R
Sbjct: 643 LEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|421491873|ref|ZP_15939235.1| FADJ [Morganella morganii subsp. morganii KT]
gi|400193633|gb|EJO26767.1| FADJ [Morganella morganii subsp. morganii KT]
Length = 717
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 256/509 (50%), Gaps = 18/509 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT + ++ ++A + L D +V P+ L+ TA AL +R V + +K++ L
Sbjct: 172 MMLTGRQLRAKQAVKMRLADDIVPPDILLETAVARALSANPAQRDPVPFRQRLEKMKGLR 231
Query: 61 EAREIFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+ IF+ R+Q R+ + IDVV+ G+ G AG + EA F KL +
Sbjct: 232 DI--IFRITRSQVHRRSGGHYPAAEQIIDVVQCGLEKGREAGFKAEAAAFGKLAVTPVSG 289
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIAT-ALILSNYPVILKEV 178
+L H+FFA K + G+ P + VA+LGGGLMG+GIA + PV +K+V
Sbjct: 290 ALRHLFFASTALKKE---SADGVKPAELHHVAVLGGGLMGAGIAAITRQRAGLPVRIKDV 346
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+++ + +L +VK+ +++ + + +S +TG DY F +D V EA+ E++
Sbjct: 347 SQEGANKALAFFWQHLSKQVKRRRLSPRERTQLMSGMTGTTDYRGFHRIDFVAEAVFESL 406
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+LKQQ+ A++E P I ASNTS++ + I R ++++G H+FSPA MPL EI+
Sbjct: 407 ALKQQMIAEIEAVTSPDTIFASNTSSLPIRDIAARASRPEKVIGLHYFSPAEKMPLAEII 466
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
T + L + ++ KT IVVG+ GF VNR+ PY A + G ID
Sbjct: 467 PHEGTDAVTLATTLQLARRQGKTAIVVGDKAGFYVNRILAPYITEALRCLTEGEPPEKID 526
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+A+T FG P+GP L D VG V F ER + + D R G ++
Sbjct: 527 KALTDFGFPIGPVALLDEVGIDVGTKIMPVLEAAFGERFALPPQLDALFRDNRLGRKNKR 586
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFA-----KLSEKDIVEMIFFPVVNE 473
GFY Y +P P K+ KA + AI P L+ ++I E ++NE
Sbjct: 587 GFYDY------TPLPWWKRCGRKAPRKADKAIYPLLGITVQECLTSQEITERCLMMMLNE 640
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPY 502
A R E + AD D +V G+GFPP+
Sbjct: 641 AVRTLDEQVIRSPADGDAGAVFGIGFPPF 669
>gi|398883773|ref|ZP_10638722.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM60]
gi|398196157|gb|EJM83174.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM60]
Length = 715
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 167/513 (32%), Positives = 256/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVV P +L+ A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVEPGKLQEAALELIKRAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + ++ E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKKGKQKKVADPSVLEVLKP------IVFEQR--EVTDEDIINWMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|104782737|ref|YP_609235.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas entomophila L48]
gi|123380844|sp|Q1I7D4.1|FADB_PSEE4 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|95111724|emb|CAK16448.1| fatty oxidation complex alpha subunit [Includes: Enoyl-CoA
hydratase ; Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase ; 3-hydroxyacyl-CoA dehydrogenase;
3-hydroxybutyryl-CoA epimerase] [Pseudomonas entomophila
L48]
Length = 715
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 167/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLQAGALDLIKRAISGELDHKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL R+
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLARTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGKRVEKGRLTPAKMAEALNAIRPTLSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + V + + ++S++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVADASVLDVLKPVIFEQR--EVSDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|398843436|ref|ZP_10600581.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM102]
gi|398102891|gb|EJL93066.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM102]
Length = 715
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 168/513 (32%), Positives = 257/513 (50%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP +L A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPEKLQEAALNLLKGAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + ++ E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDE----RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++K DP V + ++ + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYGYETDKRGKQKKVADPSVLEVLKP------IVFEQR--EVTDEDIINWMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|325277301|ref|ZP_08142928.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. TJI-51]
gi|324097567|gb|EGB95786.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. TJI-51]
Length = 715
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + EEA +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEEALKVGAVDAVVAPELLQAGAIDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + +++++DIV + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIVNWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|398876394|ref|ZP_10631551.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM67]
gi|398204799|gb|EJM91595.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM67]
Length = 715
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 167/513 (32%), Positives = 256/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVV P +L+ A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVEPGKLQEAALELIKRAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + ++ E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKKGKQKKVADPSVLEVLKP------IVFEQR--EVTDEDIINWMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|157368510|ref|YP_001476499.1| multifunctional fatty acid oxidation complex subunit alpha
[Serratia proteamaculans 568]
gi|166971635|sp|A8G8D1.1|FADB_SERP5 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|157320274|gb|ABV39371.1| fatty oxidation complex, alpha subunit FadB [Serratia
proteamaculans 568]
Length = 729
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 169/518 (32%), Positives = 262/518 (50%), Gaps = 22/518 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K V ++A +GLVDAVVAP +LV A + +E + W A Y+ K+EPL
Sbjct: 166 IIAAGKDVSAKDALKVGLVDAVVAPEKLVEAALKMLQQAIEGKLDWRA--YRQPKLEPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + A + P+ + +EA G L+ E F L RS
Sbjct: 224 LSPIEAAMSFTTAKGMVMQTAGKHYPAPMTAVKTIEAAARLGRDEALKLETASFVPLARS 283
Query: 116 ETCKSLVHIFFAQ---RGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
+ ++LV IF +G +K L K+ A+LG G+MG GIA L P
Sbjct: 284 KEARALVGIFLNDQFVKGQAK-----KLAKGIEAPKQAAVLGAGIMGGGIAYQSALKGVP 338
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
V++K++++K L G+ L ++++GK+ K + +S + LDY + +++E
Sbjct: 339 VVMKDISDKSLTLGMNEAAKLLNKQLERGKLDGMKMAQVLSTIQPTLDYAGIERAQVIVE 398
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +K + +++E + +LASNTSTI +N + + G HFF+P H M
Sbjct: 399 AVVENPKIKAAVLSEVEGLIGENTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRM 458
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+EI+R QTS I ++ ++ KTPIVV +C GF VNR+ FPY +L+ G
Sbjct: 459 PLVEIIRGEQTSDSTIAAVVAYASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSMLLRDGA 518
Query: 353 DLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQED 409
D ID+ + K FG PMGP L D+VG A FPER K I +M ++
Sbjct: 519 DFRQIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMGKDYRDAIDVMFDN 578
Query: 410 KRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+R G+ + GFY Y + K P K E+ + P+ +S+++I+ + P
Sbjct: 579 QRFGQKNQLGFYRYSQDNKGKPR---KDNDEQTDVLLAEVSQPR-QTISDEEIIARMMIP 634
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
++NE R E I A+ D+A V G+GFPP+ F
Sbjct: 635 MINEVVRCLEENIIASPAEADMALVYGIGFPPFHGGAF 672
>gi|227356963|ref|ZP_03841335.1| fatty oxidation complex alpha subunit [Proteus mirabilis ATCC
29906]
gi|425070072|ref|ZP_18473186.1| fatty acid oxidation complex subunit alpha [Proteus mirabilis
WGLW6]
gi|227162841|gb|EEI47800.1| fatty oxidation complex alpha subunit [Proteus mirabilis ATCC
29906]
gi|404595865|gb|EKA96398.1| fatty acid oxidation complex subunit alpha [Proteus mirabilis
WGLW6]
Length = 726
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 259/513 (50%), Gaps = 22/513 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K + E A GL+ A+V ++L +A ++ + W A L
Sbjct: 166 IITAGKDINAETALKNGLIQAIVPVDKLKESAISLIEQAIDGKFDWQAARQPKTVALRLT 225
Query: 61 EAREIFKFARAQA---RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
E FA A+ + P+ P+ ++ +E +A L+ E E+F KL R++
Sbjct: 226 ELEHKMSFAVAKGMVMKVAGPHYPAPMTAVNTIEKAAFLDRKAALELETENFVKLTRTDV 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
K+LV IF + V G+T A K+ A+LG G+MG GIA L PV +K+
Sbjct: 286 AKALVGIFLNDQ---YVKGITKKRHASLP-KQAAVLGAGIMGGGIAYQSALKGIPVTMKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N LE G+ + LQ R +KG+M+ KT++ + L+Y S D +V+EA++EN
Sbjct: 342 INANSLELGMTEALSLLQKRQEKGRMSAVDMAKTLASIHPTLNYASVADAQIVVEAVVEN 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + A+ E H +LASNTSTI ++L+ + + G HFF+P H MPL+EI
Sbjct: 402 PKVKASVLAETEALLADHAVLASNTSTIPISLLAKSLTRPENFCGMHFFNPVHRMPLVEI 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
++ +TS + I ++ K+ KTPI+V +C GF VNR+ FPY LL+ G D +
Sbjct: 462 IKGEKTSEETINRIVSYASKMGKTPIIVNDCPGFFVNRVLFPYFAGFSLLLRDGADFIAV 521
Query: 358 DRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
D+ + K FG PMGP L D+VG A + FP+R + +I ++ + +R G+
Sbjct: 522 DKVMEKAFGWPMGPAYLLDVVGIDTANHAQAVMAQGFPDRMGSIDKDVIALLYQQQRYGQ 581
Query: 415 TTRKGFYLY--DERRKASP--DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
GFY Y D+R K D ++ IE K + ++ I+ + P+
Sbjct: 582 KNNHGFYDYTIDKRGKKQKQVDNDIHSLIEHHVG--------KKQEFNQDTIIARMMIPM 633
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+NE R EGI A+ DIA V G+GFPP+R
Sbjct: 634 INEVIRCLDEGIIASPAEADIALVYGLGFPPFR 666
>gi|455739751|ref|YP_007506017.1| Enoyl-CoA hydratase [Morganella morganii subsp. morganii KT]
gi|455421314|gb|AGG31644.1| Enoyl-CoA hydratase [Morganella morganii subsp. morganii KT]
Length = 716
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 256/509 (50%), Gaps = 18/509 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT + ++ ++A + L D +V P+ L+ TA AL +R V + +K++ L
Sbjct: 171 MMLTGRQLRAKQAVKMRLADDIVPPDILLETAVARALSANPAQRDPVPFRQRLEKMKGLR 230
Query: 61 EAREIFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+ IF+ R+Q R+ + IDVV+ G+ G AG + EA F KL +
Sbjct: 231 DI--IFRITRSQVHRRSGGHYPAAEQIIDVVQCGLEKGREAGFKAEAAAFGKLAVTPVSG 288
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIAT-ALILSNYPVILKEV 178
+L H+FFA K + G+ P + VA+LGGGLMG+GIA + PV +K+V
Sbjct: 289 ALRHLFFASTALKKE---SADGVKPAELHHVAVLGGGLMGAGIAAITRQRAGLPVRIKDV 345
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+++ + +L +VK+ +++ + + +S +TG DY F +D V EA+ E++
Sbjct: 346 SQEGANKALAFFWQHLSKQVKRRRLSPRERTQLMSGMTGTTDYRGFHRIDFVAEAVFESL 405
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+LKQQ+ A++E P I ASNTS++ + I R ++++G H+FSPA MPL EI+
Sbjct: 406 ALKQQMIAEIEAVTSPDTIFASNTSSLPIRDIAARASRPEKVIGLHYFSPAEKMPLAEII 465
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
T + L + ++ KT IVVG+ GF VNR+ PY A + G ID
Sbjct: 466 PHEGTDAVTLATTLQLARRQGKTAIVVGDKAGFYVNRILAPYITEALRCLTEGEPPEKID 525
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
+A+T FG P+GP L D VG V F ER + + D R G ++
Sbjct: 526 KALTDFGFPIGPVALLDEVGIDVGTKIMPVLEAAFGERFALPPQLDALFRDNRLGRKNKR 585
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFA-----KLSEKDIVEMIFFPVVNE 473
GFY Y +P P K+ KA + AI P L+ ++I E ++NE
Sbjct: 586 GFYDY------TPLPWWKRCGRKAPRKADKAIYPLLGITVQECLTSQEITERCLMMMLNE 639
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPY 502
A R E + AD D +V G+GFPP+
Sbjct: 640 AVRTLDEQVIRSPADGDAGAVFGIGFPPF 668
>gi|197287354|ref|YP_002153226.1| multifunctional fatty acid oxidation complex subunit alpha [Proteus
mirabilis HI4320]
gi|194684841|emb|CAR46955.1| fatty oxidation complex alpha subunit [includes: enoyl-CoA
hydratase; 3-hydroxyacyl-CoA dehydrogenase and
3-hydroxybutyryl-CoA epimerase] [Proteus mirabilis
HI4320]
Length = 726
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 259/513 (50%), Gaps = 22/513 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K + E A GL+ A+V ++L +A ++ + W A L
Sbjct: 166 IITAGKDINAETALKNGLIQAIVPVDKLKKSAISLIEQAIDGKFDWQAARQPKTVALRLT 225
Query: 61 EAREIFKFARAQA---RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
E FA A+ + P+ P+ ++ +E +A L+ E E+F KL R++
Sbjct: 226 ELEHKMSFAVAKGMVMKVAGPHYPAPMTAVNTIEKAAFLDRKAALELETENFVKLTRTDV 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
K+LV IF + V G+T A K+ A+LG G+MG GIA L PV +K+
Sbjct: 286 AKALVGIFLNDQ---YVKGITKKRHASLP-KQAAVLGAGIMGGGIAYQSALKGIPVTMKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N LE G+ + LQ R +KG+M+ KT++ + L+Y S D +V+EA++EN
Sbjct: 342 INANSLELGMTEALSLLQKRQEKGRMSAVDMAKTLASIHPTLNYASVADAQIVVEAVVEN 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + A+ E H +LASNTSTI ++L+ + + G HFF+P H MPL+EI
Sbjct: 402 PKVKASVLAETEALLADHAVLASNTSTIPISLLAKSLTRPENFCGMHFFNPVHRMPLVEI 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
++ +TS + I ++ K+ KTPI+V +C GF VNR+ FPY LL+ G D +
Sbjct: 462 IKGEKTSEETINRIVSYASKMGKTPIIVNDCPGFFVNRVLFPYFAGFSLLLRDGADFIAV 521
Query: 358 DRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
D+ + K FG PMGP L D+VG A + FP+R + +I ++ + +R G+
Sbjct: 522 DKVMEKAFGWPMGPAYLLDVVGIDTANHAQAVMAQGFPDRMGSIDKDVIALLYQQQRYGQ 581
Query: 415 TTRKGFYLY--DERRKASP--DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
GFY Y D+R K D ++ IE K + ++ I+ + P+
Sbjct: 582 KNNHGFYDYTIDKRGKKQKQVDNDIHSLIEHHVG--------KKQEFNQDTIIARMMIPM 633
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+NE R EGI A+ DIA V G+GFPP+R
Sbjct: 634 INEVIRCLDEGIIASPAEADIALVYGLGFPPFR 666
>gi|425073917|ref|ZP_18477022.1| fatty acid oxidation complex subunit alpha [Proteus mirabilis
WGLW4]
gi|404594570|gb|EKA95139.1| fatty acid oxidation complex subunit alpha [Proteus mirabilis
WGLW4]
Length = 726
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 259/513 (50%), Gaps = 22/513 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K + E A GL+ A+V ++L +A ++ + W A L
Sbjct: 166 IITAGKDINAETALKNGLIQAIVPVDKLKESAISLIEQAIDGKFDWQAARQPKTVALRLT 225
Query: 61 EAREIFKFARAQA---RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
E FA A+ + P+ P+ ++ +E +A L+ E E+F KL R++
Sbjct: 226 ELEHKMSFAVAKGMVMKVAGPHYPAPMTAVNTIEKAAFLDRKAALELETENFVKLTRTDV 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
K+LV IF + V G+T A K+ A+LG G+MG GIA L PV +K+
Sbjct: 286 AKALVGIFLNDQ---YVKGITKKRHASLP-KQAAVLGAGIMGGGIAYQSALKGIPVTMKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N LE G+ + LQ R +KG+M+ KT++ + L+Y S D +V+EA++EN
Sbjct: 342 INANSLELGMTEALSLLQKRQEKGRMSAVDMAKTLASIHPTLNYASVADAQIVVEAVVEN 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + A+ E H +LASNTSTI ++L+ + + G HFF+P H MPL+EI
Sbjct: 402 PKVKASVLAETEALLADHAVLASNTSTIPISLLAKSLTRPENFCGMHFFNPVHRMPLVEI 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
++ +TS + I ++ K+ KTPI+V +C GF VNR+ FPY LL+ G D +
Sbjct: 462 IKGEKTSEETINRIVSYASKMGKTPIIVNDCPGFFVNRVLFPYFAGFSLLLRDGADFIAV 521
Query: 358 DRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
D+ + K FG PMGP L D+VG A + FP+R + +I ++ + +R G+
Sbjct: 522 DKVMEKVFGWPMGPAYLLDVVGIDTANHAQAVMAQGFPDRMGSIDKDVIALLYQQQRYGQ 581
Query: 415 TTRKGFYLY--DERRKASP--DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
GFY Y D+R K D ++ IE K + ++ I+ + P+
Sbjct: 582 KNNHGFYDYTIDKRGKKQKQVDNDIHSLIEHHVG--------KKQEFNQDTIIARMMIPM 633
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+NE R EGI A+ DIA V G+GFPP+R
Sbjct: 634 INEVIRCLDEGIIASPAEADIALVYGLGFPPFR 666
>gi|339486624|ref|YP_004701152.1| fatty acid oxidation complex subunit alpha [Pseudomonas putida S16]
gi|338837467|gb|AEJ12272.1| fatty acid oxidation complex, alpha subunit [Pseudomonas putida
S16]
Length = 715
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/512 (32%), Positives = 258/512 (50%), Gaps = 25/512 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP LV A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPQLLMAGALDLVKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEAQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDP---KFAKLSEKDIVEMIFFPVV 471
KGFY Y+ ++ P K + A + + P + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP-----KKVADATVLD--VLKPIVFEQREVTDEDIINWMMIPLC 636
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 637 LETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|226943562|ref|YP_002798635.1| multifunctional fatty acid oxidation complex subunit alpha
[Azotobacter vinelandii DJ]
gi|226718489|gb|ACO77660.1| fatty acid oxidation complex alpha subunit FadB [Azotobacter
vinelandii DJ]
Length = 715
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/507 (32%), Positives = 257/507 (50%), Gaps = 31/507 (6%)
Query: 12 EAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATL----YKTDKIEPL--GEAREI 65
EA +G DAVVA +L R+ ALD+L +R L + K+EPL G ++
Sbjct: 178 EALKVGAADAVVADERL----REAALDLL--KRAAAGELDFRARRQPKLEPLKLGNIEQM 231
Query: 66 FKFARAQA---RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLV 122
F A+A + P+ P+ + ++ S A L+ E F KL + +SLV
Sbjct: 232 MAFESAKAYVAAQAGPHYPAPLAAVKTIQKAANSAREAALEIEVGGFVKLAATTVAQSLV 291
Query: 123 HIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKF 182
+F ++ + D R VK+ A+LG G+MG GIA L P++LK++ E+
Sbjct: 292 GLFLNEQELKRKARKYDKD--AREVKQAAVLGAGIMGGGIAYQSALKGTPILLKDIREES 349
Query: 183 LEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQ 242
+ G+ L RV+KG++T + + ++ + L Y F VD+V+EA++E + +KQ
Sbjct: 350 IRQGLAEADKQLAKRVEKGRLTVGQMAEVLNGIRPTLSYGDFPQVDLVVEAVVERLEVKQ 409
Query: 243 QIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQ 302
+ A++E P ++ASNTSTI ++ + + R G HFF+P +MPL+E++R Q
Sbjct: 410 AVLAEVEAQVPGEAVIASNTSTISISRLADSLKRPQRFCGMHFFNPVPLMPLVEVIRGRQ 469
Query: 303 TSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAIT 362
T + I + +K+ KTPIVV +C GF VNR+ FPY L+ G D IDR +
Sbjct: 470 TDERTIATTVAYARKMGKTPIVVNDCPGFLVNRVLFPYLAGFTRLLAAGIDFRRIDRVME 529
Query: 363 KFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK--SMIIPIMQEDKRAGETTRKGF 420
FG PMGP L D+VG A+ E +PER + I ++ R G+ + GF
Sbjct: 530 GFGWPMGPAYLLDVVGIDTAVHARNVLAEGYPERMKEEGDTAIDVLLRAGRLGQKSGSGF 589
Query: 421 YLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
Y Y+ A P DP + + +G +L +++IV + P+ EA R
Sbjct: 590 YAYERDGGAKPKKLEDPRAAELLGPLVRETG--------ELDDEEIVARLMLPLCLEAVR 641
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
EGI AA+ D+ + G+GFPP+R
Sbjct: 642 CLEEGIVESAAEADMGLIYGIGFPPFR 668
>gi|91713386|gb|ABE53312.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Shewanella denitrificans OS217]
Length = 742
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/506 (32%), Positives = 249/506 (49%), Gaps = 12/506 (2%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K + ++A +G +DAVV P L++ A Q D L + W A + L +
Sbjct: 195 TGKEQRPDDALQVGAIDAVVEPENLLAAALQMLKDALAEKLDWQARRKRKQSPLALPKLE 254
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + VVE L+ E F KL ++E +
Sbjct: 255 AMMSFTTAKGMVYAVAGKHYPAPMAAVSVVEQAATLDRAGALKVENLAFIKLAKTEVATA 314
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + V A+LG G+MG GIA P+++K++ +
Sbjct: 315 LIGIFLNDQFVKGK--AKKAGKLAKDVNSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 372
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 373 PALELGLNEAAKILATQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDIVVEAVVEHPKV 432
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K + A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+EI+R
Sbjct: 433 KATVLAEVEDYVAEDAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEIIRG 492
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D +D+
Sbjct: 493 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLADGADFAAVDKV 552
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R K+ I IM E+KR G+
Sbjct: 553 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKNGTDAIDIMFENKRLGQKNS 612
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
KGFY Y R+ P ++ + + G A + DI+ P++ E R
Sbjct: 613 KGFYAYSVDRRGKPKKDIDA---TSYQLLGAAFG-ELKAFEADDIIARCMIPMIIETVRC 668
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
EGI A+ D+ V G+GFPP+R
Sbjct: 669 LEEGIIASPAEGDMGLVYGLGFPPFR 694
>gi|389695783|ref|ZP_10183425.1| 3-hydroxyacyl-CoA dehydrogenase [Microvirga sp. WSM3557]
gi|388584589|gb|EIM24884.1| 3-hydroxyacyl-CoA dehydrogenase [Microvirga sp. WSM3557]
Length = 695
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 258/506 (50%), Gaps = 20/506 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEH--RRPWVATLYKTDKIEP 58
++ +PV+ EA LGL+D + + L A A +++ RR ++ D
Sbjct: 159 LVTGGRPVRAPEALRLGLIDRL-SSGDLRQDAMALARELIGQPLRRTGERSVAPLDAETA 217
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGP-RAGLQKEAEDFQKLLRSET 117
+ EI K AR +AP +V + + P + G+ +E E F +L S
Sbjct: 218 SAKVAEIRKKARG---AEAPGKAAELVLL------AANLPLQDGMARERETFLELRSSAQ 268
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L H FF +R ++PG+ + PR ++KV I+G G MGSGIA A + + V + E
Sbjct: 269 SAALRHAFFGEREVMRLPGLDSV--EPRPIQKVGIVGAGTMGSGIAIAFADAGFDVRIVE 326
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+E+ L AG RV +V G++T ++ + + + S D D+VIEA+ E+
Sbjct: 327 TSEQALSAGQARVTDVYDKQVASGRITPAAQDERLKAIGYAIGTSSLLDRDLVIEAVFED 386
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ +K+ +F DL+ PP ILA+NTS +D++LI T +VG HFFSPAHVM LLEI
Sbjct: 387 LEVKRALFRDLDAILPPGTILATNTSYLDVSLIAAATSRPADVVGLHFFSPAHVMKLLEI 446
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
VRT+ T+ V+ L + K+++K P+V C GF NR+ Y Q A L+E G + +
Sbjct: 447 VRTDATAADVVATGLALAKRLRKIPVVCRVCDGFVGNRILSRYRQQAEYLLEEGALPHEV 506
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ FG PMGPF ++DL G + A + R I + E R G T
Sbjct: 507 DAALEAFGFPMGPFAVSDLAGLDINWARRKRLAPTRDPRERYVDIADRLCEAGRFGRKTG 566
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y Y++ ++ DP V +E++ G+ +S +I I +VNEAC++
Sbjct: 567 AGWYRYEDGKR-EIDPAVTALVEESSQRRGL----TRRAISADEIQSRIRAAIVNEACKI 621
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
E I + D+D+ + G G+P +R
Sbjct: 622 LDERIVERPLDVDVVMMHGYGYPAWR 647
>gi|421781199|ref|ZP_16217672.1| fatty oxidation complex, alpha subunit FadB [Serratia plymuthica
A30]
gi|407756871|gb|EKF66981.1| fatty oxidation complex, alpha subunit FadB [Serratia plymuthica
A30]
Length = 729
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 263/519 (50%), Gaps = 24/519 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K V ++A +GLVDAVVAP +LV A + ++ W A Y+ K++PL
Sbjct: 166 IIAAGKDVSAKDALKVGLVDAVVAPEKLVEAALKMLQQAIDGHLDWRA--YRQPKLDPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + A + P+ + +EA G L+ E F L RS
Sbjct: 224 LSPIEAAMSFTTAKGMVLQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARS 283
Query: 116 ETCKSLVHIF----FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNY 171
++LV IF F + K+ D AP K+ A+LG G+MG GIA L
Sbjct: 284 NEARALVGIFLNDQFVKSQAKKLAKNAD---AP---KQAAVLGAGIMGGGIAYQSALKGV 337
Query: 172 PVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVI 231
PVI+K++++K L G+ L ++++GK+ K + +S + LDY + +++
Sbjct: 338 PVIMKDISDKSLALGMNEAAKLLNKQLERGKLDGMKMAQVLSTIQPTLDYAGIERAQVIV 397
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHV 291
EA++EN +K + +++E +LASNTSTI +N + + G HFF+P H
Sbjct: 398 EAVVENPKIKAAVLSEVEGLIGEDTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHR 457
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
MPL+EI+R QTS I ++ ++ KTPIVV +C GF VNR+ FPY +L+ G
Sbjct: 458 MPLVEIIRGEQTSDNTIAAVVAYATRMGKTPIVVNDCPGFFVNRVLFPYFAGFSMLLRDG 517
Query: 352 TDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQE 408
D ID+ + K FG PMGP L D+VG A FPER K I +M +
Sbjct: 518 VDFRQIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMGKDYRDAIDVMFD 577
Query: 409 DKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFF 468
++R G+ + GFY Y + K P K E+ ++ P+ A +S+++++ +
Sbjct: 578 NQRFGQKNQLGFYRYSQDNKGKPR---KDNDEQTDALLAAVSQPRQA-ISDEEVIARMMI 633
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
P++NE R E I A+ D+A V G+GFPP+ F
Sbjct: 634 PMINEVVRCLEENIIASPAEADMALVYGIGFPPFHGGAF 672
>gi|384413133|ref|YP_005622495.1| fatty acid oxidation complex alpha subunit [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|320013637|gb|ADV97208.1| fatty acid oxidation complex alpha subunit [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 729
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ T K V +A +GLVDAVV P +LV +A ++ + W A + K+EPL
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + + A + P+ + +EA G L E F L S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++LV IF + G+A ++ A+LG G+MG GIA L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++NE L+ G+ L ++++GK+ K ++ + LDY + +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E +LASNTSTI ++ + + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EI+R +TS + + ++ ++ KTPIVV +C GF VNR+ FPY +LV G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A FPER K + +M +++R
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ +GFY Y + K P E + ++K + I + S++DI+ P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTTIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI AA+ D+A V G+GFPP+ F
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVF 672
>gi|431801612|ref|YP_007228515.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas putida HB3267]
gi|430792377|gb|AGA72572.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas putida HB3267]
Length = 715
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 256/509 (50%), Gaps = 19/509 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP LV A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLMAGALDLVKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEAQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY Y+ ++ P KK + I + +++++DI+ + P+ E
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVADATVLDVLKPIVYEQREVTDEDIINWMMVPLCLET 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AA+ D+ V G+GFPP+R
Sbjct: 640 VRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|162210779|ref|YP_561035.2| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella denitrificans OS217]
Length = 716
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 166/510 (32%), Positives = 250/510 (49%), Gaps = 12/510 (2%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K + ++A +G +DAVV P L++ A Q D L + W A + L +
Sbjct: 169 TGKEQRPDDALQVGAIDAVVEPENLLAAALQMLKDALAEKLDWQARRKRKQSPLALPKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + VVE L+ E F KL ++E +
Sbjct: 229 AMMSFTTAKGMVYAVAGKHYPAPMAAVSVVEQAATLDRAGALKVENLAFIKLAKTEVATA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + V A+LG G+MG GIA P+++K++ +
Sbjct: 289 LIGIFLNDQFVKGK--AKKAGKLAKDVNSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
LE G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 347 PALELGLNEAAKILATQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDIVVEAVVEHPKV 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K + A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+EI+R
Sbjct: 407 KATVLAEVEDYVAEDAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEIIRG 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D +D+
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLADGADFAAVDKV 526
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R K+ I IM E+KR G+
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKNGTDAIDIMFENKRLGQKNS 586
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
KGFY Y R+ P ++ + + G A + DI+ P++ E R
Sbjct: 587 KGFYAYSVDRRGKPKKDIDA---TSYQLLGAAFG-ELKAFEADDIIARCMIPMIIETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
EGI A+ D+ V G+GFPP+R F
Sbjct: 643 LEEGIIASPAEGDMGLVYGLGFPPFRGGVF 672
>gi|117919909|ref|YP_869101.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella sp. ANA-3]
gi|171460759|sp|A0KV76.1|FADJ_SHESA RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|117612241|gb|ABK47695.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Shewanella sp. ANA-3]
Length = 709
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 173/507 (34%), Positives = 260/507 (51%), Gaps = 15/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL +P +L +E G
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRTAKPVKKSLV-NQLLEGTG 223
Query: 61 EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I + A+ +K N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQAAKQVVKKTQGNYPAPAKIIDCVRQGMAKGMQKGLEVEASHFAELVVSKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G PR+VKK ILGGGLMG GIA+ + P +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+NEK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 342 INEKGLSNALSYAYKLLDKGVKRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ + I + + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSIEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKIAPILEKELGERFKAPAAFDKLLSDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KGFY Y KAS + K E ++ G+ +D + ++E+ +V+M+ NEA
Sbjct: 582 KGFYQYAAGNKAS--SKKKAVDESVYAVLGIKPGMDKDLSAVAERCVVQML-----NEAV 634
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
R +GI D DI ++ G+GFPP+
Sbjct: 635 RCLDDGIIASPRDGDIGAIFGIGFPPF 661
>gi|322786657|gb|EFZ13041.1| hypothetical protein SINV_01640 [Solenopsis invicta]
Length = 696
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 268/525 (51%), Gaps = 34/525 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVA--------PNQ-----LVSTARQWALDILEHR---- 43
M+LT K +K ++A +GLVD VV P + L TA + A DI R
Sbjct: 132 MVLTGKNLKPDKAKKVGLVDIVVNRLGPGVALPEENTIRYLEETAIKTAQDIANGRLKIA 191
Query: 44 RPWVATLYK-TDKIEPLGEAR-EIFKFARAQARKQAPNL-THPIVCIDVVEAGVVSGPRA 100
R + + K T ++ + + ++FK A+AQ K L P+ ++VV G+ GP A
Sbjct: 192 RGPKSLMDKITQQVLSINYVKDQVFKKAKAQVMKMTNGLYPAPLKILEVVRVGLDKGPVA 251
Query: 101 GLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGS 160
G EA+ F +L + CK L ++FF Q K G VKK+A+LG GLMG+
Sbjct: 252 GFDAEAKGFGQLAATPECKGLTNLFFGQTACKK----NRFGAPKSTVKKIAVLGAGLMGA 307
Query: 161 GIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLD 220
GI I + VI+K+ NE L G+ +++ L + VK+ +++ +K +S L L
Sbjct: 308 GIVQVSIDKGFDVIMKDTNEAGLYRGVNQIQKGLDTAVKRKRISSIVKDKYLSHLDATLK 367
Query: 221 YESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRI 280
Y+SFKDVD+VIEA+ E++ +K ++ ++E P HCI+A+NTS I + I + D++
Sbjct: 368 YDSFKDVDIVIEAVFEDIGIKHKVLKEIEAVVPNHCIIATNTSAIPITKIAAGSSRPDKL 427
Query: 281 VGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPY 340
+G H+FSP M LLEI+ TS + I +D+G K KT I VG+C GF R+
Sbjct: 428 IGMHYFSPVDKMELLEIITHKGTSEETIKSAIDVGLKQGKTVITVGDCPGFYTTRILSTM 487
Query: 341 TQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS 400
A L++ G D +D+ FG P+G L+D VG V + + + ER +K
Sbjct: 488 LSEAIRLLQEGVDPMHLDKLTKTFGFPVGAATLSDEVGIDVGAHISVDLAKAYGER-FKG 546
Query: 401 MIIPIMQEDKRAGETTR---KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKL 457
+ I+ + +AG R KG ++Y+ +S + +V + M ++PK
Sbjct: 547 GDVNILSDMVKAGFLGRKSGKGIFVYET---SSKNRDVN--MGALDIMKKYKLEPK-GST 600
Query: 458 SEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
S++D + VNEA E I + D+ +V G+GFPP+
Sbjct: 601 SDEDRQMRLVSRFVNEAVLCLEENILANPLEGDVGAVFGLGFPPF 645
>gi|119470792|ref|ZP_01613403.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase
[Alteromonadales bacterium TW-7]
gi|119446019|gb|EAW27298.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase
[Alteromonadales bacterium TW-7]
Length = 739
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 269/531 (50%), Gaps = 30/531 (5%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
MLT K ++ ++A G++D V + L+ A+++A ++P A K DK+ L E
Sbjct: 166 MLTGKQIRPKQAKKAGVLDDCVPQSVLLKVAKEFAA----KKKPQ-AKEPKLDKVSKLLE 220
Query: 62 ARE-----IFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
+ IFK A+ +K + P+ I V A V + EAE F L+ S
Sbjct: 221 SNPFGRNFIFKKAKENVLKKTGGHYPAPLAIIKAVRASVELDELKAYKTEAEGFATLVMS 280
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
E K+L +FFA K D AP V K A+LGGGLMG+GIA + + + PV
Sbjct: 281 EQSKALRGLFFATTEMKKEWRNDD---APA-VTKTAVLGGGLMGAGIAHVSAVKAKVPVR 336
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+V E+ + + L R+K+ M++ + T++ +TG DY FK +D+VIEA+
Sbjct: 337 IKDVAEQGISNAMNYTYKILDKRLKRRIMSKADMQLTMNRITGTTDYSGFKHIDLVIEAV 396
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E+++LKQ + AD+E+ C + I ASNTS++ ++ I + ++G H+FSP MPL
Sbjct: 397 FEDLALKQGMVADVEQQCQENTIFASNTSSLPISQIAANATRPENVIGLHYFSPVEKMPL 456
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+ TS + I +++ +K KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 457 VEIIPHEGTSQETIARVVNFARKQGKTPIVVKDMAGFYVNRILAPYLNEAANLMLAGEPI 516
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID A+ +FG P+GP L D VG + + ER M + KR G
Sbjct: 517 EKIDAALVEFGFPVGPLALLDEVGIDIGSKIAPILEKELGERFKGPDAFSRMIDSKRLGR 576
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T +GFY Y+++ KK E + GV + ++L++ +I + ++NEA
Sbjct: 577 KTGRGFYDYEKKG--------KKVDESVYELLGVTPN---SRLNKNEIAQRCVAQMLNEA 625
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR---FVTFIHRGFSKSSSCFKNL 522
R EGI D DI ++ G+GFPP+ F G SK SS L
Sbjct: 626 ARCLDEGIIASPRDGDIGAIFGIGFPPFLGGPFSYMDKLGTSKVSSDMSTL 676
>gi|326429421|gb|EGD74991.1| trifunctional enzyme subunit alpha [Salpingoeca sp. ATCC 50818]
Length = 751
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 173/519 (33%), Positives = 253/519 (48%), Gaps = 23/519 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL----VSTARQWALDILE-HRRPWVATLYKTDK 55
+MLT K VK +A + LVD V P+ L V A+ A L+ R P
Sbjct: 190 LMLTGKNVKPSKAKRMKLVDNVADPSALKHAAVLAAKGLADGTLKVDREPKGVQKLINKV 249
Query: 56 IEPLGEAREI-FKFARAQARKQAPNL-THPIVCIDVVEAGVVSG--PRAGLQKEAEDFQK 111
IE R FK AR KQ + P+ IDV+E G +AG + EA+ F +
Sbjct: 250 IEGTEFGRNFAFKKARDMVMKQTKGVYPAPLKIIDVLETSAKHGFCSKAGYEAEAKAFGE 309
Query: 112 LLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNY 171
L + ++LV I+F Q K P G R+ V +LG GLMG+GIA +
Sbjct: 310 LGMTPESRALVSIYFGQTACKKNP----YGKPKRKENTVGVLGAGLMGAGIAEVTMTKGV 365
Query: 172 PVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYES-----FKD 226
++LK+ + L G+ ++ NL + KK +MT + ++T+S + G+ D ++ F
Sbjct: 366 DILLKDAKPEGLARGLDQIYKNLNKKTKKRRMTTFERDQTMSRIVGLTDSDANWQKHFSH 425
Query: 227 VDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFF 286
DM+IEA+ EN+ LK +I E P HC+ A+NTS I + + E + ++ +G H+F
Sbjct: 426 ADMIIEAVFENLELKHKIIKQFEAITPAHCVFATNTSAIPITKLAEASSRPEQFIGMHYF 485
Query: 287 SPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFL 346
SP MPLLEI+R TS + D+G K KT IVV + GF VNR PY+ A
Sbjct: 486 SPVDKMPLLEIIRHPGTSDETTARAYDMGLKQGKTVIVVKDVPGFYVNRCLGPYSDEAMA 545
Query: 347 LVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIP 404
++ G + IDRA+ K+G P+GP L D VG A + G + ER T ++
Sbjct: 546 VLLDGASIEEIDRAMVKYGYPVGPMTLVDEVGIDTAASVGKTLQGDLGERIGTADPELLE 605
Query: 405 IMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVE 464
+ G T KG +++ R K + +PEV + IE+ R + G P S +DI
Sbjct: 606 KVVAKGFLGRKTGKGLHIFPPRGKKTVNPEVVEMIEEQRKLRG---KPSSGLTSVEDIQM 662
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ VNE I DI +V G+GFPP+R
Sbjct: 663 RLVSRFVNETALCLQHDIIGSPVVGDIGAVFGIGFPPFR 701
>gi|87310775|ref|ZP_01092902.1| fatty oxidation complex, alpha subunit FadB [Blastopirellula marina
DSM 3645]
gi|87286532|gb|EAQ78439.1| fatty oxidation complex, alpha subunit FadB [Blastopirellula marina
DSM 3645]
Length = 724
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 153/511 (29%), Positives = 251/511 (49%), Gaps = 20/511 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTA------RQWALDILEHRRPWVATLYKTD 54
M+ + V A +GL D +P+ LV+ A Q + L+ R A + ++
Sbjct: 169 MITGGESVSAANAAKMGLADDFTSPDDLVAAAIRMIEQDQESKSYLQDREVRSAAIEMSE 228
Query: 55 -KIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
++ LG + + Q + Q P P+ ++ + G + + L EAE L
Sbjct: 229 TELGFLGATAS--AYIQGQTKGQYP---APMAALETLLGGAMVDAESALTMEAEGLAGLF 283
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
+ +L+++FF K GV + +++ V+++G G+MG+GIA A I
Sbjct: 284 GTPVNAALMNVFFLTDRNKKDDGVDQDDVEKTKIESVSVIGAGIMGAGIAAASIRRGILT 343
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
L + N + L G+ V GK T K + ++L + +VIEA
Sbjct: 344 TLSDANAEALRRGVAGVLEEAAYDRDAGKKTIAKAVEGAAMLNASISDSEVAASKLVIEA 403
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
I+EN+ +K++I+A LE ILASNTST+ + + +R VG HFF+P M
Sbjct: 404 IVENLEVKRKIYARLEPQLADDAILASNTSTLPITQLAANLAKPERFVGIHFFNPVRKMK 463
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R QTS + + K++ K PIVV + GF VNR+ FPY A L++ G
Sbjct: 464 LVEVIRGAQTSDATVASAVAFAKRLGKFPIVVNDGPGFLVNRLLFPYMNEALALLQEGVS 523
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAG 413
+ +D+ KFGMP+GP L D+VG A G + FP+RT S I+P + + R G
Sbjct: 524 MERVDKCAKKFGMPLGPITLYDMVGIDTAFYAGRTMYDAFPDRTLASPILPALVKAGRLG 583
Query: 414 ETTRKGFYLYDER-RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
+ + GFY Y+ R R+A PDP K+I+ + G+ D ++ +++ +F P++
Sbjct: 584 QKSGLGFYSYENRKRRAQPDPAAAKYIDP--YIKGMPRDE-----TDAQVIDRLFLPMLL 636
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
EA R I D+D+ + G+GFPP++
Sbjct: 637 EATRAMEANIVRDVRDIDLGLIFGLGFPPFK 667
>gi|423096327|ref|ZP_17084123.1| fatty oxidation complex, alpha subunit [Pseudomonas fluorescens
Q2-87]
gi|397887175|gb|EJL03658.1| fatty oxidation complex, alpha subunit [Pseudomonas fluorescens
Q2-87]
Length = 715
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 167/510 (32%), Positives = 256/510 (50%), Gaps = 21/510 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVV P +L + A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVEPGKLQEAALETIKRAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D R VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IARDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEHAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + ++ E KR G+
Sbjct: 524 IDKIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVA-IDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY Y+ ++ +K + A + + I + +++++DI+ + P+ E
Sbjct: 584 KNGKGFYAYETDKRGK-----QKKVADASVLEVLKPIVYEQREVTDEDIINWMMIPLCLE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AA+ D+ V G+GFPP+R
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|359448151|ref|ZP_09237700.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Pseudoalteromonas sp.
BSi20480]
gi|358046036|dbj|GAA73949.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Pseudoalteromonas sp.
BSi20480]
Length = 739
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 269/531 (50%), Gaps = 30/531 (5%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
MLT K ++ ++A G++D V + L+ A+++A ++P A K DK+ L E
Sbjct: 166 MLTGKQIRPKQAKKAGVLDDCVPQSVLLKVAKEFAA----KKKPQ-AKEPKLDKVSKLLE 220
Query: 62 ARE-----IFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
+ IFK A+ +K + P+ I V A V + EAE F L+ S
Sbjct: 221 SNPFGRNFIFKKAKENVLKKTGGHYPAPLAIIKAVRASVELDELKAYKTEAEGFATLVMS 280
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
E K+L +FFA K D AP V K A+LGGGLMG+GIA + + + PV
Sbjct: 281 EQSKALRGLFFATTEMKKEWRNDD---APA-VTKTAVLGGGLMGAGIAHVSAVKAKVPVR 336
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+V E+ + + L R+K+ M++ + T++ +TG DY FK +D+VIEA+
Sbjct: 337 IKDVAEQGISNAMNYTYKILDKRLKRRIMSKADMQLTMNRITGTTDYSGFKHIDLVIEAV 396
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E+++LKQ + AD+E+ C + I ASNTS++ ++ I + ++G H+FSP MPL
Sbjct: 397 FEDLALKQGMVADVEQQCQENTIFASNTSSLPISQIAANATRPENVIGLHYFSPVEKMPL 456
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+ TS + I +++ +K KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 457 VEIIPHEGTSQETIARVVNFARKQGKTPIVVKDMAGFYVNRILAPYLNEAANLMLAGEPI 516
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID A+ +FG P+GP L D VG + + ER M + KR G
Sbjct: 517 EKIDAALVEFGFPVGPLALLDEVGIDIGSKIAPILEKELGERFKGPDAFSRMIDSKRLGR 576
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T +GFY Y+++ KK E + GV + ++L++ +I + ++NEA
Sbjct: 577 KTGRGFYDYEKKG--------KKVDESVYELLGVTPN---SRLNKSEIAQRCVAQMLNEA 625
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR---FVTFIHRGFSKSSSCFKNL 522
R EGI D DI ++ G+GFPP+ F G SK SS L
Sbjct: 626 ARCLDEGIIASPRDGDIGAIFGIGFPPFLGGPFSYMDKLGTSKVSSDMSTL 676
>gi|148548812|ref|YP_001268914.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas putida F1]
gi|166971633|sp|A5W6H0.1|FADB_PSEP1 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|148512870|gb|ABQ79730.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas putida F1]
Length = 715
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYESNRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|344239797|gb|EGV95900.1| Peroxisomal bifunctional enzyme [Cricetulus griseus]
Length = 701
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 162/516 (31%), Positives = 262/516 (50%), Gaps = 25/516 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + + + EA LG++D VV + V A ++A I++ +P + L
Sbjct: 129 LITSGRHILAGEALKLGILDEVVTSDP-VEEAVRFAQKIMD--KPIEPRRILNKPVPSLP 185
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
IF A + RKQ P P C+ V+A V G+++E + F L S ++
Sbjct: 186 NMDRIFAEAITKVRKQFPGRLAPETCVRSVQASVKHPYEVGIKEEEKLFMYLRASGQARA 245
Query: 121 LVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L + FFA++ +K G + + + V V +LG G MG GIA + + + +PV+ E
Sbjct: 246 LQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFVRAGFPVVAVE 305
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ K L++ + A L+ K M Q L + VD+V+EA+ E+
Sbjct: 306 SDLKQLDSARKMITATLEKEASK--MQQSGQASARPKLRFSSSTKELSSVDLVVEAVFED 363
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK+Q+FA+L C P L +NTS ++++ I T ++G HFFSPAH+M LLE+
Sbjct: 364 MNLKKQVFAELSALCKPGAFLCTNTSALNVDEIASATDCPHLVIGTHFFSPAHIMKLLEV 423
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ + +SP I ++++ KKI K +VVGNC GF NRM PY + L+E G+ I
Sbjct: 424 IPSRYSSPATIATVMNLSKKIGKIGVVVGNCHGFVGNRMLSPYYSQTYFLLEEGSKPEDI 483
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER----TYKSMIIPIM 406
D AI +FG MGPFR++DL G V TG P R + S + ++
Sbjct: 484 DGAIEEFGFRMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPARKRGNSRYSPLPDLL 543
Query: 407 QEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVE 464
E R G+ T KG+Y YD+ R PDP + F+ + R+ I+ F +S+++I+E
Sbjct: 544 CEYGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYRATH--HIEQHF--ISKEEILE 599
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFP 500
+ ++NEA R+ EG+A +D+ + G G+P
Sbjct: 600 RCMYALINEAFRILGEGMAASPEHIDVIYLNGYGWP 635
>gi|262194894|ref|YP_003266103.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Haliangium
ochraceum DSM 14365]
gi|262078241|gb|ACY14210.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Haliangium
ochraceum DSM 14365]
Length = 722
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 260/497 (52%), Gaps = 24/497 (4%)
Query: 18 LVDAVVAPNQLVSTARQWALDILEH----RRPWVATLYKTDKIEPL--GEAREIFKFARA 71
+VD V AP +L R+ AL +L R W A D PL E +F AR
Sbjct: 183 VVDEVCAPEKL----RERALTLLRTAVAGERDWHARRRAKDAPLPLKDDERAALFGAARE 238
Query: 72 QARKQAPNLTHPIVCIDVVEA---GVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQ 128
Q ++AP H + +EA + L+ EA F ++ +++ +LV F +
Sbjct: 239 QVARRAPK--HQPAAMSALEAMARAATAERTRALEIEARAFAEVAKTQAADALVQTFLSG 296
Query: 129 RGTSKVP-GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGI 187
+ K+ G +L AP V + A+LG G+MG GIA L VILK++ + LE G+
Sbjct: 297 QQVKKITRGYRELA-AP--VARAAVLGAGIMGGGIAYTSALRGVRVILKDIAQAQLERGM 353
Query: 188 GRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFAD 247
R L RVK+GKM QE+ + + +T LDY F VD+V+EA+ E+++LK Q+ A+
Sbjct: 354 DEARGLLGKRVKRGKMNQEQADAVLGAITPQLDYTDFDQVDVVVEAVSESLALKHQVLAE 413
Query: 248 LEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQV 307
+E ILASNTS++ ++ + + +VG HFF+P MPL+EI+R ++TSP
Sbjct: 414 VEAQVREGAILASNTSSLRIDELAPALARPENLVGMHFFNPVPAMPLVEIIRGSRTSPAA 473
Query: 308 IVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMP 367
+ ++ + + KTPIVV + GF VNR+ PY QA LV G D +D A+ FG P
Sbjct: 474 LATVVGYAEAMGKTPIVVADGPGFLVNRVLTPYMQAFAKLVADGADFVQVDAAMEAFGWP 533
Query: 368 MGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI--MQEDKRAGETTRKGFYLYDE 425
MGP L D+VG A+ I FPER + P+ M E R G+ + GFY Y
Sbjct: 534 MGPAYLNDVVGMDTAVHVAEIIIAGFPERMARMAPDPLALMVERGRLGQKSGLGFYRYQA 593
Query: 426 RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVK 485
P+ K E +R++ + + +++ +IVE + P++ EA + EG+
Sbjct: 594 GAGGRPE---KSVAEDSRALLAALQEEGSSTVTDGEIVERMMLPMIFEAAQCLEEGVVGS 650
Query: 486 AADLDIASVMGMGFPPY 502
A +LD+A ++G+GFP Y
Sbjct: 651 APELDLAMLLGVGFPAY 667
>gi|119504486|ref|ZP_01626565.1| enoyl-CoA hydratase [marine gamma proteobacterium HTCC2080]
gi|119459508|gb|EAW40604.1| enoyl-CoA hydratase [marine gamma proteobacterium HTCC2080]
Length = 699
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 156/510 (30%), Positives = 258/510 (50%), Gaps = 21/510 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + P+ + A +L LVD V A + L+ A +++ ++E P T +
Sbjct: 151 LITSGNPINAQRAMALQLVDKV-AEDNLLDAAIAYSVALVEQSAPQRQASALTLSVST-- 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E ++ RA+ K+ P +D + A S GL++E E+F L +
Sbjct: 208 EDTDLIASMRAKLLKKTRGERAPQRILDCLLAAADSPFETGLKREREEFMACLEDPQSAA 267
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVK-----KVAILGGGLMGSGIATALILSNYPVIL 175
L H+FFA+R K+ + P+ K V I+G G MG GIA + V L
Sbjct: 268 LRHMFFAERAAGKIDSL------PKDTKALDIASVGIIGAGTMGGGIAMCFAQAGIAVTL 321
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
++ ++ ++ G+ ++ N VKKG++T + + ++ +T ++ +VDMVIEA+
Sbjct: 322 VDMTDEAVKGGLEKIAKNYAISVKKGRLTVAQTDAILANITTSSSFDDLANVDMVIEAVF 381
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN+ +K+++F L+ C P +LASNTS ++ I T + ++G HFFSPA+VM LL
Sbjct: 382 ENLEVKKEVFGKLDVICKPGAVLASNTSYQSIDAIAAATSRPESVLGMHFFSPANVMKLL 441
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYT-QAAFLLVERGTDL 354
E+V+ +S VI + +GKKI K ++ G C GF NRM Y +AA L+E GT
Sbjct: 442 EVVKGASSSDIVIATAMAVGKKIGKVSVLSGMCYGFIGNRMLRHYGREAALCLIEGGTPA 501
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID A+ +GM MGP ++DL G + Q M+ + E R G+
Sbjct: 502 Q-IDSAMESWGMAMGPLAVSDLAGLDIGYKAREQLTAEQKGDPASYMVADRLVEAGRLGQ 560
Query: 415 TTRKGFYLYD-ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
+ G+Y YD E R+ DP V + +AR G I P+ + +++I+ + + NE
Sbjct: 561 KSGAGYYQYDPETRQRQEDPAVMAIVAEARRELG--ITPR--RFEDEEIINRLTLALANE 616
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ EGIA +A+D+D+ G GFP ++
Sbjct: 617 GAKLLQEGIAQRASDIDVVYCYGYGFPRFK 646
>gi|146306611|ref|YP_001187076.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas mendocina ymp]
gi|421504564|ref|ZP_15951505.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas mendocina DLHK]
gi|166971632|sp|A4XSM8.1|FADB_PSEMY RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|145574812|gb|ABP84344.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Pseudomonas mendocina ymp]
gi|400344522|gb|EJO92891.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas mendocina DLHK]
Length = 715
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 167/514 (32%), Positives = 264/514 (51%), Gaps = 29/514 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K K +A +G VDAVVAP +L V A LD R+P + L K + I
Sbjct: 170 SGKENKAADALKVGAVDAVVAPAKLKEAALDLVKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
E + F+ A+ QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQM----MCFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKT 284
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+SL+ +F + K D R VK A+LG G+MG GIA P+++
Sbjct: 285 SVAESLIGLFLNDQELKKKAKHHDE--IARDVKLAAVLGAGIMGGGIAYQSASKGTPILM 342
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ E+ ++ G+ L RV+KG+MT K + ++ + + Y F +VD+V+EA++
Sbjct: 343 KDIREEGIQMGLTEASKLLGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVV 402
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+
Sbjct: 403 ENPKVKQIVLAEVEDVVREDAILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLV 462
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++R ++S + + KK+ K PIVV +C GF VNR+ FPY L+ G D
Sbjct: 463 EVIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFV 522
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAG 413
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G
Sbjct: 523 RIDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLG 582
Query: 414 ETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+ KGFY Y+ ++ P DPE + ++ + ++ + +++++DI+ + P
Sbjct: 583 QKNGKGFYAYETDKRGKPKKVSDPEAYELLKS------IVVEER--EVTDEDIINFMMIP 634
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 635 LCLETVRCLEDGIVDTAAEADMGLIYGIGFPPFR 668
>gi|170720838|ref|YP_001748526.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas putida W619]
gi|254788571|sp|B1J5A5.1|FADB_PSEPW RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|169758841|gb|ACA72157.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas putida
W619]
Length = 715
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP LV A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLQAGALDLVKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAQSLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|332534658|ref|ZP_08410490.1| enoyl-CoA hydratase [Pseudoalteromonas haloplanktis ANT/505]
gi|332035938|gb|EGI72419.1| enoyl-CoA hydratase [Pseudoalteromonas haloplanktis ANT/505]
Length = 641
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 269/527 (51%), Gaps = 22/527 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDIL-EHRRPWVATLYKTDKIEPLG 60
MLT K ++ ++A G++D V + L+ A+++A + + P + + K + P G
Sbjct: 72 MLTGKQIRPKQAKKAGVLDDCVPHSVLLKVAKEFATKKKPQAKEPKLDNISKLLESNPFG 131
Query: 61 EAREIFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
IFK A+ +K + P+ I V A V + EAE F L+ S+ K
Sbjct: 132 R-NFIFKKAKENVLKKTGGHYPAPLAIIKAVRASVELDELKAYKTEAESFATLVMSDESK 190
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKEV 178
+L IFFA K D AP + K A+LGGGLMG+GIA + + + PV +K+V
Sbjct: 191 ALRGIFFATTEMKKEWRNED---APA-ISKTAVLGGGLMGAGIAHVSAVKAKVPVRIKDV 246
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
E+ + + L R+K+ M++ + T++ +TG DY FK +D+VIEA+ E++
Sbjct: 247 AEQGIGNAMSYTYKILDKRLKRRIMSKADMQLTMNRITGTTDYSGFKHIDLVIEAVFEDL 306
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+LKQ + AD+E+ C + I ASNTS++ ++ I + + ++G H+FSP MPL+EI+
Sbjct: 307 ALKQGMVADVEQQCQENTIFASNTSSLPISQIAAQAARPENVIGLHYFSPVEKMPLVEII 366
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
TS + I +++ +K KTPIVV + GF VNR+ PY A L+ G + ID
Sbjct: 367 PHEGTSKETIARVVNFARKQGKTPIVVKDMAGFYVNRILAPYLNEAANLMLAGEPIEKID 426
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ +FG P+GP L D VG + + ER M + KR G + +
Sbjct: 427 AALVEFGFPVGPLALLDEVGIDIGSKIAPILEKELGERFKGPDAFMRMIDSKRLGRKSGR 486
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY YD++ KK E + GV + P +L++ +I + ++NEA R
Sbjct: 487 GFYEYDKKG--------KKVDESVYELLGVTLAP---RLNKSEIAKRCVSKMLNEAVRCL 535
Query: 479 AEGIAVKAADLDIASVMGMGFPPYRFVTFIHR---GFSKSSSCFKNL 522
+GI D DI ++ G+GFPP+ F + G SK SS L
Sbjct: 536 DDGIIASPRDGDIGAIFGIGFPPFLGGPFSYMDKLGASKISSDMSTL 582
>gi|330502547|ref|YP_004379416.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas mendocina NK-01]
gi|328916833|gb|AEB57664.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas mendocina NK-01]
Length = 715
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 166/514 (32%), Positives = 264/514 (51%), Gaps = 29/514 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A +G VDAVVAP +L V A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVGAVDAVVAPAKLKDAALDLVKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
E + F+ A+ QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQM----MCFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKT 284
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+SL+ +F + K D R VK A+LG G+MG GIA P+++
Sbjct: 285 SVAESLIGLFLNDQELKKKAKHHDE--IARDVKLAAVLGAGIMGGGIAYQSASKGTPILM 342
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ E+ ++ G+ L RV+KG+MT K + ++ + + Y F +VD+V+EA++
Sbjct: 343 KDIREEGIQMGLNEASKLLGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVV 402
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+
Sbjct: 403 ENPKVKQIVLAEVEAVVREDAILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLV 462
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++R ++S + + KK+ K PIVV +C GF VNR+ FPY L+ G D
Sbjct: 463 EVIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFV 522
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAG 413
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G
Sbjct: 523 RIDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLG 582
Query: 414 ETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+ KGFY Y+ ++ P DP + ++ + ++ + +++++DI+ + P
Sbjct: 583 QKNGKGFYAYETDKRGKPKKVSDPAAYELLKS------IVVEER--EVTDEDIINFMMIP 634
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 635 LCLETVRCLEDGIVDTAAEADMGLIYGIGFPPFR 668
>gi|146282093|ref|YP_001172246.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri A1501]
gi|166971634|sp|A4VKA3.1|FADB_PSEU5 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|145570298|gb|ABP79404.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas stutzeri
A1501]
Length = 715
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 162/513 (31%), Positives = 258/513 (50%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A + VDAVVAP +L V A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVHAVDAVVAPEKLQEAALDLVKRAISGELDYKAKRQPKLDKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G ++ EA F KL ++
Sbjct: 229 EQMMAFETSKAFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKAIEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SLV +F + + K D R VK A+LG G+MG GIA + P+++K
Sbjct: 286 VAQSLVGLFLSDQELKKKAKAYDK--QARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T EK + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLDEASKLLGKRVEKGRLTPEKMAQALNAIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + A++E + I+ASNTSTI ++ + + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKHAVLAEVEGHVREDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS I + KK+ K+P+VV +C GF VNR+ FPY + G D
Sbjct: 464 VIRGEKTSETAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGE 414
D+ + KFG PMGP L D+VG E FP+R + +M + R G+
Sbjct: 524 ADKVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYDANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K P DP+ + ++ I + +LS++DI+ + P+
Sbjct: 584 KNGKGFYAYEMDKKGKPKKVVDPQAYELLK--------PIVAETRELSDEDIINYMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|75451515|sp|Q93Q12.1|FADB_PSEOL RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|15077078|gb|AAK83058.1|AF288535_1 FadB [Pseudomonas oleovorans]
Length = 715
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP LV A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLMAGALDLVKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D K+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDAKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVETQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVADASVLDVLKPIVFEQR--EVTDEDIINWMMIPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|383454198|ref|YP_005368187.1| multifunctional fatty acid oxidation complex subunit alpha
[Corallococcus coralloides DSM 2259]
gi|380732742|gb|AFE08744.1| multifunctional fatty acid oxidation complex subunit alpha
[Corallococcus coralloides DSM 2259]
Length = 745
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 283/561 (50%), Gaps = 45/561 (8%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDIL------------------EH 42
++LT K VK +A LG+VD VV L A + A+++
Sbjct: 173 LILTGKNVKPSKAKKLGIVDEVVPVPMLKDIALKRAVELAAGTLKVERSHQGFKAVAQSG 232
Query: 43 RRPWVA---------TLYKTDKIE--PLGEAREIFKFARAQARKQAPNLTHPIV--CIDV 89
++ +A L+K +E PLG + +F A+ Q K+ +P + V
Sbjct: 233 KKKGIAGIFQGLINKDLWKEAALEDNPLGR-KVMFDQAKKQLLKKTRG-KYPAQEKALQV 290
Query: 90 VEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKK 149
+ G+ SG +AGL EA+ F +L+ ++ + LV IFFA K G + L PR VKK
Sbjct: 291 IRVGLESGRKAGLDAEAKAFGELVFTDVSRRLVEIFFATTALKKENGTANPNLKPREVKK 350
Query: 150 VAILGGGLMGSGIA-TALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKF 208
V +LGGGLMG GIA A +L PV +K+ ++ + +V+ L RVK+ +T+ +
Sbjct: 351 VGVLGGGLMGGGIAYVAGVLQGVPVRVKDRDDAGAGRALKQVQTVLDERVKRRSLTRLES 410
Query: 209 EKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLN 268
+S +T DY FK VD+VIEA+ E++ LK Q+ A++E + I ASNTS++ +
Sbjct: 411 NAKLSNITAGTDYSGFKSVDLVIEAVFEDLKLKHQVIAEVEAVTGENTIFASNTSSLPIG 470
Query: 269 LIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNC 328
+ + + +++G H+FSP H MPLLEI+ T+ V +D+GKK KT IVV +
Sbjct: 471 ELAKGSKRPSQVIGMHYFSPVHKMPLLEIITHPGTAEWVTATCVDVGKKQGKTVIVVNDG 530
Query: 329 TGFAVNRMFFPY-TQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGM 387
GF +R+ PY +AA+LL E G D+ +D+A+ FG P+GP L D VG VA G
Sbjct: 531 PGFYTSRILAPYMNEAAYLLAE-GADIVQLDKALVDFGFPVGPITLLDEVGIDVAQKVGP 589
Query: 388 QFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSG 447
F +R + + D R G T KGFYLY+ +K DP+V + +
Sbjct: 590 IMEAAFGKRMAAPKALEGVVSDGRLGRKTNKGFYLYENGKKKEVDPQVYLLLPHGKDRK- 648
Query: 448 VAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
L ++ E + +VNEA R EGI A D D+ ++ G+GFPP+ F
Sbjct: 649 --------SLEASEMAERVALQMVNEAIRCLGEGILRNARDGDVGAIFGLGFPPFLGGPF 700
Query: 508 IHRGFSKSSSCFKNLLCYFDQ 528
+ ++ + L Y D+
Sbjct: 701 RYADALGPANLLRKLEHYQDK 721
>gi|297172764|gb|ADI23729.1| 3-hydroxyacyl-CoA dehydrogenase [uncultured Rhodospirillales
bacterium HF4000_38H21]
Length = 651
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 266/506 (52%), Gaps = 17/506 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+ KPV ++A+++GL+DA+ L A +A I+ RP L + ++
Sbjct: 151 MITGGKPVSADKANAIGLIDAITH-GPLRDAALDFARTIINRPRPL--ELRRCPPVDAPD 207
Query: 61 EAR--EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+ + EI +AR Q P++ + G+ AGL E E F +L S+
Sbjct: 208 DHQWDEIIAGVGKKARGQ----IAPVIAAQAIRIGIEQDTAAGLVHEREKFVELRDSDQS 263
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
K+L HIFFA+R +K+P + G AP + +V ++GGG+MG+GIATA +L+ + + E
Sbjct: 264 KALRHIFFAERSVAKLPELD--GAAPNPINEVGVIGGGIMGAGIATASLLAGFKATIIER 321
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
NE+ G V+ +L +K+G +TQ++F ++ L+ DY D+V+EA+ E++
Sbjct: 322 NEEACTHGRATVKKHLSGSLKRGLITQDRFNDLLASLSTSTDYADLGTADLVVEAVFEDM 381
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
++K +F L K+C P +LASNTS +D+N I R++G HFFSPAH+M LLE+V
Sbjct: 382 AVKHDVFGKLSKHCKPDAVLASNTSYLDINEIAANCTHPQRVIGLHFFSPAHIMKLLEVV 441
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
RT+Q + + +K+ K + G C GF NR+ Y + ++E G + ID
Sbjct: 442 RTDQANATSLATAFAFARKLGKIAVPCGVCDGFIGNRIMSAYRKHCEYMLEDGALPHQID 501
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIE-NFPERTYKSMIIPIMQEDKRAGETTR 417
A+ +FG PMG F + D+ G ++ AT + P Y ++ + + D R G+
Sbjct: 502 AAMVEFGFPMGLFAMQDMAGLEISWATRKRLAPFRDPAERYVALGDYLCEMD-RFGKKNG 560
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
G+Y YDE KA PDP+V + G+ K+I+ +I + +E ++
Sbjct: 561 LGWYRYDENGKALPDPDVDALVIAESDKKGIT----RRDFDAKEIISVILDAMRSEGDKI 616
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
AEGIA+ +D+ V G GFP ++
Sbjct: 617 LAEGIAMGPDAIDVVMVNGYGFPRHK 642
>gi|167032684|ref|YP_001667915.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas putida GB-1]
gi|189044409|sp|B0KH74.1|FADB_PSEPG RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|166859172|gb|ABY97579.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas putida
GB-1]
Length = 715
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|348028640|ref|YP_004871326.1| multifunctional fatty acid oxidation complex subunit alpha
[Glaciecola nitratireducens FR1064]
gi|347945983|gb|AEP29333.1| multifunctional fatty acid oxidation complex subunit alpha
[Glaciecola nitratireducens FR1064]
Length = 702
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 180/506 (35%), Positives = 261/506 (51%), Gaps = 19/506 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT PV+ ++A G+VD +V + L+ A + A + R + K +E
Sbjct: 164 MMLTGAPVRAKQAKKYGIVDDMVPQSILLDVAIEMANKKISKRVLKKDMMAKA--LENTS 221
Query: 61 EAREI-FKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I FK AR Q K N P+ ID +EAG + R G EA F +L+ +
Sbjct: 222 FGRNILFKKAREQTLSKTLGNYPAPMYIIDCIEAGT-NDSRKGYATEARLFGQLVMTPES 280
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
K L IFFA K GV G+A +VKK+ +LGGGLMG GIA + P +K+
Sbjct: 281 KQLREIFFATTDMKKESGVD--GVAAVKVKKIGVLGGGLMGGGIAFVTATKAKVPARIKD 338
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N + I L +VKK M + + +K +SLL+G LDY +++ DMVIEA+ E+
Sbjct: 339 INPNGIAGAIRYSYDILNKKVKKRFMLKTEMQKQLSLLSGCLDYSGYQNNDMVIEAVFED 398
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
V LKQ++ AD+E++C H + ASNTS+I + I + +VG H+FSP MPL E+
Sbjct: 399 VKLKQKMVADIEEHCNEHTVFASNTSSIPIAEIAAEAKRPENVVGLHYFSPVDKMPLAEV 458
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPY-TQAAFLLVERGTDLYL 356
+ +TS Q I ++ K+ KTPIVV + GF VNR+ PY ++A F+ +E G L
Sbjct: 459 IPHAKTSDQTISTTVEFAKRQGKTPIVVKDGAGFYVNRILAPYVSEAGFMAIE-GQPLDS 517
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
ID+A+ KFG P+GPF+L D VG V F ER + E+ R G+
Sbjct: 518 IDKALMKFGFPVGPFKLLDEVGIDVGTKIIPILKGQFGERFNAPEAFDKLLENDRKGKKN 577
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+ GFY YD + K + + G+ + KF S +VE ++NEA
Sbjct: 578 KSGFYDYDAKNAG------KHIDDSVYRLLGITPEKKF---SADTVVERCVLMMLNEAAL 628
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPY 502
E + D DI ++ G+GFPP+
Sbjct: 629 CLQEEVIRNPRDGDIGAIFGIGFPPF 654
>gi|354484178|ref|XP_003504267.1| PREDICTED: peroxisomal bifunctional enzyme-like [Cricetulus
griseus]
Length = 722
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 162/516 (31%), Positives = 262/516 (50%), Gaps = 25/516 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + + + EA LG++D VV + V A ++A I++ +P + L
Sbjct: 150 LITSGRHILAGEALKLGILDEVVTSDP-VEEAVRFAQKIMD--KPIEPRRILNKPVPSLP 206
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
IF A + RKQ P P C+ V+A V G+++E + F L S ++
Sbjct: 207 NMDRIFAEAITKVRKQFPGRLAPETCVRSVQASVKHPYEVGIKEEEKLFMYLRASGQARA 266
Query: 121 LVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L + FFA++ +K G + + + V V +LG G MG GIA + + + +PV+ E
Sbjct: 267 LQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFVRAGFPVVAVE 326
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ K L++ + A L+ K M Q L + VD+V+EA+ E+
Sbjct: 327 SDLKQLDSARKMITATLEKEASK--MQQSGQASARPKLRFSSSTKELSSVDLVVEAVFED 384
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK+Q+FA+L C P L +NTS ++++ I T ++G HFFSPAH+M LLE+
Sbjct: 385 MNLKKQVFAELSALCKPGAFLCTNTSALNVDEIASATDCPHLVIGTHFFSPAHIMKLLEV 444
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ + +SP I ++++ KKI K +VVGNC GF NRM PY + L+E G+ I
Sbjct: 445 IPSRYSSPATIATVMNLSKKIGKIGVVVGNCHGFVGNRMLSPYYSQTYFLLEEGSKPEDI 504
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER----TYKSMIIPIM 406
D AI +FG MGPFR++DL G V TG P R + S + ++
Sbjct: 505 DGAIEEFGFRMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPARKRGNSRYSPLPDLL 564
Query: 407 QEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVE 464
E R G+ T KG+Y YD+ R PDP + F+ + R+ I+ F +S+++I+E
Sbjct: 565 CEYGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYRATH--HIEQHF--ISKEEILE 620
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFP 500
+ ++NEA R+ EG+A +D+ + G G+P
Sbjct: 621 RCMYALINEAFRILGEGMAASPEHIDVIYLNGYGWP 656
>gi|392537079|ref|ZP_10284216.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudoalteromonas marina mano4]
Length = 739
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 268/531 (50%), Gaps = 30/531 (5%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
MLT K ++ ++A G++D V + L+ A+++A ++P K DK+ L E
Sbjct: 166 MLTGKQIRPKQAKKAGVLDDCVPQSVLLKVAKEFAA----KKKPQTKE-PKLDKVSKLLE 220
Query: 62 ARE-----IFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
+ IFK A+ +K + P+ I V A V + EAE F L+ S
Sbjct: 221 SNPFGRNFIFKKAKENVLKKTGGHYPAPLAIIKAVRASVELDELKAYKTEAEGFATLVMS 280
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
E K+L +FFA K D AP V K A+LGGGLMG+GIA + + + PV
Sbjct: 281 EQSKALRGLFFATTEMKKEWRNDD---APA-VTKTAVLGGGLMGAGIAHVSAVKAKVPVR 336
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+V E+ + + L R+K+ M++ + T++ +TG DY FK +D+VIEA+
Sbjct: 337 IKDVAEQGISNAMNYTYKILDKRLKRRIMSKADMQLTMNRITGTTDYSGFKHIDLVIEAV 396
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E+++LKQ + AD+E+ C + I ASNTS++ ++ I + ++G H+FSP MPL
Sbjct: 397 FEDLALKQGMVADVEQQCQENTIFASNTSSLPISQIAANATRPENVIGLHYFSPVEKMPL 456
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+ TS + I +++ +K KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 457 VEIIPHEGTSQETIARVVNFARKQGKTPIVVKDMAGFYVNRILAPYLNEAANLMLAGEPI 516
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID A+ +FG P+GP L D VG + + ER M + KR G
Sbjct: 517 EKIDAALVEFGFPVGPLALLDEVGIDIGSKIAPILEKELGERFKGPDAFSRMIDSKRLGR 576
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T +GFY Y+++ KK E + GV + ++L++ +I + ++NEA
Sbjct: 577 KTGRGFYDYEKKG--------KKVDESVYELLGVTPN---SRLNKSEIAQRCVAQMLNEA 625
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR---FVTFIHRGFSKSSSCFKNL 522
R EGI D DI ++ G+GFPP+ F G SK SS L
Sbjct: 626 ARCLDEGIIASPRDGDIGAIFGIGFPPFLGGPFSYMDKLGTSKVSSDMSTL 676
>gi|429334838|ref|ZP_19215489.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas putida CSV86]
gi|428760508|gb|EKX82771.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas putida CSV86]
Length = 715
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 259/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A +G VDAVVAP +L + A D R+P + L K + I
Sbjct: 170 SGKENRAEDALKVGAVDAVVAPEKLGEAALDLIKRAISGEFDHKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G ++ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKAIEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGKRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEAQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + V + + ++S++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVADASVLEVLKPVVYEQR--EVSDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|386020357|ref|YP_005938381.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri DSM 4166]
gi|327480329|gb|AEA83639.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri DSM 4166]
Length = 715
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 162/513 (31%), Positives = 258/513 (50%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A + VDAVVAP +L V A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVHAVDAVVAPEKLQEAALDLVKRAISGELDYKAKRQPKLDKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G ++ EA F KL ++
Sbjct: 229 EQMMAFETSKAFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKAIEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SLV +F + + K D R VK A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLVGLFLSDQELKKKAKAYDK--QARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T EK + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLDEASKLLGKRVEKGRLTPEKMAQALNAIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + A++E + I+ASNTSTI ++ + + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKHAVLAEVEGHVREDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS I + KK+ K+P+VV +C GF VNR+ FPY + G D
Sbjct: 464 VIRGEKTSETAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGE 414
D+ + KFG PMGP L D+VG E FP+R + +M + R G+
Sbjct: 524 ADKVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYDANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K P DP+ + ++ I + +LS++DI+ + P+
Sbjct: 584 KNGKGFYAYEMDKKGKPKKVVDPQAYELLK--------PIVAETRELSDEDIINYMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|386013039|ref|YP_005931316.1| FadB_3 [Pseudomonas putida BIRD-1]
gi|313499745|gb|ADR61111.1| FadB_3 [Pseudomonas putida BIRD-1]
Length = 715
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|88705568|ref|ZP_01103278.1| fatty-acid oxidation complex alpha-subunit [Congregibacter
litoralis KT71]
gi|88700081|gb|EAQ97190.1| fatty-acid oxidation complex alpha-subunit [Congregibacter
litoralis KT71]
Length = 730
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 160/519 (30%), Positives = 259/519 (49%), Gaps = 26/519 (5%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTD 54
M T + K E+A G VDAV AP QL + +A L+I R + L
Sbjct: 183 MATGQEKKAEDALKAGAVDAVAAPEQLQEVAMSTLESAMAGKLNIDARRSAKSSPL---- 238
Query: 55 KIEPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQK 111
PL + + F + A++ N PI ++V+EA G L+ E F +
Sbjct: 239 ---PLNDTEAMMAFFTIKSMVAQQAGKNYPAPIKVVEVIEAARGMGLEDALKVEGAGFAE 295
Query: 112 LLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNY 171
L +++ ++V +F + +K + A +++ + A+LG G+MG GIA L
Sbjct: 296 LAKTDVAAAMVGLFLNDQALAKTAKSWEKK-ADKKIARAAVLGAGIMGGGIAYQSSLKGV 354
Query: 172 PVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVI 231
P+ +K++ ++ L+ G+ L RV +G+MT +K + ++ + L YE F VD+V+
Sbjct: 355 PIKMKDIAQEGLDLGLSEANKLLSKRVSRGRMTADKMGEVLNNIDPTLTYEGFDSVDIVV 414
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHV 291
EA++EN +K + A+ EK+ P +LASNTSTI ++ + E + G HFF+P H
Sbjct: 415 EAVVENPKVKHAVLAETEKHISPDAVLASNTSTISIDFLAEALERPENFCGMHFFNPVHA 474
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
MPL+E++R +TS I + ++ K +VV +C GF VNR+ FPY LV G
Sbjct: 475 MPLVEVIRGAKTSDTAIARTVAYANRMGKKAVVVNDCPGFLVNRVLFPYFDGFSKLVRDG 534
Query: 352 TDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQE 408
D +D+ + ++G PMGP L+D+VG + E FP+R +K+ M E
Sbjct: 535 ADFQAVDKVMERWGWPMGPAYLSDVVGIDTGVHAAGVMAEGFPDRMKMDFKT-ATETMYE 593
Query: 409 DKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFF 468
+ R G+ KGFY Y ++ P KK + + I + + ++I+ +
Sbjct: 594 NDRLGQKNGKGFYEYVMDKRGKP----KKTVSQETYDLIAPITAERKEFDREEIIARMML 649
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
P+ E R EGI AA+ D+A + G+GFPP+R F
Sbjct: 650 PMCTELARCVEEGIVGSAAEADLALLYGIGFPPFRGGVF 688
>gi|440229007|ref|YP_007342800.1| fatty oxidation complex, alpha subunit FadB [Serratia marcescens
FGI94]
gi|440050712|gb|AGB80615.1| fatty oxidation complex, alpha subunit FadB [Serratia marcescens
FGI94]
Length = 729
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 168/518 (32%), Positives = 263/518 (50%), Gaps = 22/518 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K + +EA +GLVDAVVAP +L ARQ ++ + W A+ + K+EPL
Sbjct: 166 IIAAGKDIGAKEALKVGLVDAVVAPEKLADAARQMLQQAIDGQLDWRAS--RQPKLEPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + A + P+ + +EA G L+ E F L RS
Sbjct: 224 LSPIEAAMSFTTAKGMVLQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARS 283
Query: 116 ETCKSLVHIFFAQ---RGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++LV IF +G +K + AP K+ A+LG G+MG GIA L P
Sbjct: 284 NEARALVGIFLNDQFVKGQAK--KLAKDHAAP---KQAAVLGAGIMGGGIAYQSALKGVP 338
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
V++K+++EK L G+G L ++++GK+ K ++ + LDY + +++E
Sbjct: 339 VLMKDISEKSLTLGMGEAAKLLNKQLERGKLDGMKMAGVLATIQPTLDYAGIERAQVIVE 398
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +K + +++E +LASNTSTI +N + + G HFF+P H M
Sbjct: 399 AVVENPKVKAAVLSEVESLIGEETVLASNTSTIPINELAKSLQRPQNFCGMHFFNPVHRM 458
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+EI+R +TS I ++ ++ KTPIVV +C GF VNR+ FPY LL+ G
Sbjct: 459 PLVEIIRGERTSDDTIAAVVAYASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGA 518
Query: 353 DLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQED 409
D +D+ + K FG PMGP L D+VG A FPER K + +M ++
Sbjct: 519 DFRQVDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMGKDYRDAVDVMFDN 578
Query: 410 KRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+R G+ + GFY Y + K P K+ E+ ++ P+ +S ++ + + P
Sbjct: 579 QRFGQKNQLGFYRYSQDNKGRPR---KENDEQTDTLLAEVSQPR-QNISAEETIARMMIP 634
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
++NE R EGI A+ D+A V G+GFPP+ F
Sbjct: 635 MINEVVRCLEEGIIASPAEADMALVYGIGFPPFHGGVF 672
>gi|399544741|ref|YP_006558049.1| Fatty acid oxidation complex subunit alpha [Marinobacter sp.
BSs20148]
gi|399160073|gb|AFP30636.1| Fatty acid oxidation complex subunit alpha [Marinobacter sp.
BSs20148]
Length = 715
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 258/516 (50%), Gaps = 43/516 (8%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTA-------RQWALDILEHRRPWVATLYKTDKIEPLGE 61
+ + A +G VDA+V P++LV A LD L R + K + +E +
Sbjct: 175 RADVALKVGAVDAIVEPDKLVDAALSIIHQVNNGKLDNLARREEKKGKI-KLNVMESM-M 232
Query: 62 AREIFK-FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A EI K F A+A K P P+ I V++ ++ EA+ F K+ ++E S
Sbjct: 233 AFEISKAFVGAKAGKNYP---APVEAIKVMQKHAGMTRDKAIEVEAKGFAKMAKTEVSAS 289
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRR-------VKKVAILGGGLMGSGIATALILSNYPV 173
L+ +F + +L +R VK A+LG G+MG G+A L P+
Sbjct: 290 LIGLFLNDQ---------ELKHKAKRWAKDAADVKLAAVLGAGIMGGGVAYQSALKGTPI 340
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
I+K++N + + G+ + L R+ KG+M ++ ++ +T L+Y FK+VD+V+EA
Sbjct: 341 IMKDINPEGIALGLKEAKKLLLKRIDKGRMKPDQMADVLNSITPALNYGDFKNVDLVVEA 400
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
++EN +K + ++E IL SNTSTI ++L+ + + G HFF+P H+MP
Sbjct: 401 VVENPKVKDAVLREVEGQVREDAILTSNTSTISIDLLAKNLKRPENFCGMHFFNPVHMMP 460
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R +TS + I + + KTPIVV +C GF VNR+ FPY LV G D
Sbjct: 461 LVEVIRGKKTSDRAIATAVAYATAMGKTPIVVNDCPGFLVNRVLFPYFGGFIGLVRDGAD 520
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK--SMIIPIMQEDKR 411
+D+ + KFG PMGP L D+VG G E FP+R + I +M ++KR
Sbjct: 521 FQKVDKVMEKFGWPMGPAYLLDVVGMDTGKHAGAVMAEGFPDRMKHEGTTAIDVMFDNKR 580
Query: 412 AGETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
G+ KGFY Y+ RK D E K ++ V D +F + +I+ +
Sbjct: 581 YGQKNEKGFYRYELDRKGKQQKVVDEESYKLLKPV-----VQGDKEF---EDDEIIARMM 632
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
P+ E R +GI AD D+ + G+GFPP+R
Sbjct: 633 IPLCLETVRCLEDGIVESPADADMGLIYGIGFPPFR 668
>gi|375108846|ref|ZP_09755100.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella jeotgali KCTC 22429]
gi|374571032|gb|EHR42161.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella jeotgali KCTC 22429]
Length = 712
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 179/506 (35%), Positives = 266/506 (52%), Gaps = 15/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI-EPL 59
M+LT K ++ +A LGLVD VV + L+ A + AL R +L DK+ E
Sbjct: 168 MILTGKQLRAAQAKKLGLVDEVVPESILLDAAVKKALAGKPRREAKKQSLL--DKLLENT 225
Query: 60 GEARE-IFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
G R+ +F A Q +K N + I+V++ GV G + GL EA+ F +L +
Sbjct: 226 GPGRKLVFSQALKQTLKKTQGNYPAALRIIEVIQTGVEQGYQKGLAAEAKAFGQLCMTPE 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIAT-ALILSNYPVILK 176
+L IFFA K G D PR+V+K A+LGGGLMG GIA + + PV +K
Sbjct: 286 SAALRSIFFATTQMKKESGAGDA--KPRKVRKAAVLGGGLMGGGIANVSATKAGVPVRIK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ + + L + KK +++ + +K + L+TG DY F DVD+V+EA+ E
Sbjct: 344 DIAEQGINNALKYRFDILNKKYKKRFISKAEMQKQLLLITGTTDYSGFHDVDIVVEAVFE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++SLKQQ+ AD+E++C H I ASNTS++ ++ I E+ + ++G H+FSP MPL+E
Sbjct: 404 DLSLKQQMVADIEQHCAEHTIFASNTSSLPIHKIAEKAARPENVIGLHYFSPVDKMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++ ++TS + I + +K KTPIVV + GF VNR+ Y A ++ G +
Sbjct: 464 VIAHDKTSAETIATTVAFARKQGKTPIVVKDGAGFYVNRILALYMNEAANILLAGEPVEK 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
IDRA+ KFG P+GP L D VG V ER + D R G+ T
Sbjct: 524 IDRALVKFGFPVGPVTLLDEVGIDVGAKISPILTAELGERFAAPAAFDKLLADGRKGKKT 583
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
KGFYLY + K K E ++ GV P L+ ++I ++NEA R
Sbjct: 584 EKGFYLYGKAAKKG----KKLVDESVYAVLGVTPAP---ALNGEEIASRCTAQMLNEAVR 636
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPY 502
EGI A D DI ++ G+GFPP+
Sbjct: 637 CLEEGIIASARDGDIGAIFGIGFPPF 662
>gi|383936625|ref|ZP_09990048.1| 3-hydroxyacyl-CoA dehydrogenase [Rheinheimera nanhaiensis E407-8]
gi|383702287|dbj|GAB60139.1| 3-hydroxyacyl-CoA dehydrogenase [Rheinheimera nanhaiensis E407-8]
Length = 710
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 268/514 (52%), Gaps = 31/514 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LT K ++ +A GLVD VV + L+ A + AL R P K+ +G
Sbjct: 167 MILTGKQLRAAQAKKAGLVDEVVPNSILLDAAVKLALKGKPKREPV--------KLNLVG 218
Query: 61 EAREIFKFAR----AQARKQAPNLTH-----PIVCIDVVEAGVVSGPRAGLQKEAEDFQK 111
+ E F R +QARKQ + T P+ +DV++ GV SG +AGL EA+ F +
Sbjct: 219 KVLERTPFGRNILFSQARKQTLSKTQGNYPAPLKILDVIKTGVDSGMQAGLAAEAKAFGE 278
Query: 112 LLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SN 170
L ++ +L +FFA K G + P +V+K A+LGGGLMG GIA +
Sbjct: 279 LCMTKESAALRSLFFATTQMKKETGAGET--KPNKVRKAAVLGGGLMGGGIANVTATKAG 336
Query: 171 YPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMV 230
V +K++NE+ + + + L+ + + +++ + +K + L+TG DY F D D+V
Sbjct: 337 IAVRIKDINEQGISNALKYSYSLLEKKFNRRFISKAEMQKQLLLITGTTDYSGFHDADIV 396
Query: 231 IEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAH 290
+EA+ E+++LKQQ+ AD+E++C + I ASNTS++ + I + + ++G H+FSP
Sbjct: 397 VEAVFEDLALKQQMVADIEQHCSENTIFASNTSSLPIKQIAAKAQRPENVIGLHYFSPVD 456
Query: 291 VMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVER 350
MPL+E++ TS Q I + +K KTPIVV + GF VNR+ Y A ++
Sbjct: 457 KMPLVEVIAHEGTSAQTIATTVAFARKQGKTPIVVKDGAGFYVNRILALYMNEAANVLLE 516
Query: 351 GTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDK 410
G + ID+A+ KFG P+GP L D VG V + ER + D
Sbjct: 517 GEPVEKIDKALVKFGFPVGPVTLLDEVGIDVGAKISPILTQELGERFSAPAAFDKLLADG 576
Query: 411 RAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFA--KLSEKDIVEMIFF 468
R G+ + KGFY Y + K K+ + S+ GV P+ ++S + +V+M+
Sbjct: 577 RKGKKSEKGFYRYGKTAKKGK----KQVDDSVYSVLGVTPAPRLNSDEISSRCVVQML-- 630
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
NEA R EGI A D DI ++ G+GFPP+
Sbjct: 631 ---NEAVRCLEEGIIASARDGDIGAIFGIGFPPF 661
>gi|26988860|ref|NP_744285.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas putida KT2440]
gi|81586273|sp|Q88L02.1|FADB_PSEPK RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|24983666|gb|AAN67749.1|AE016406_4 fatty oxidation complex, alpha subunit [Pseudomonas putida KT2440]
Length = 715
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|386822857|ref|ZP_10110049.1| multifunctional fatty acid oxidation complex subunit alpha
[Serratia plymuthica PRI-2C]
gi|386380234|gb|EIJ20979.1| multifunctional fatty acid oxidation complex subunit alpha
[Serratia plymuthica PRI-2C]
Length = 729
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 169/516 (32%), Positives = 264/516 (51%), Gaps = 18/516 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K V ++A +GLVDAVVAP +LV A + ++ + W A Y+ K++PL
Sbjct: 166 IIAAGKDVSAKDALKVGLVDAVVAPEKLVEAALKMLQQAIDGQLDWRA--YRQPKLDPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + A + P+ + +EA G L+ E F L RS
Sbjct: 224 LSPIEAAMSFTTAKGMVLQTAGKHYPAPMTAVKTIEAAARLGRDEALKLETASFVPLARS 283
Query: 116 ETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
+ ++LV IF Q S+ + AP K+ A+LG G+MG GIA L PVI
Sbjct: 284 KEARALVGIFLNDQFVKSQAKKLAKNVEAP---KQAAVLGAGIMGGGIAYQSALKGVPVI 340
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K++++K L G+ L ++++GK+ K + +S + LDY + +++EA+
Sbjct: 341 MKDISDKSLALGMNEAAKLLNKQLERGKLDGLKMAQVLSTIQPTLDYAGIERAQVIVEAV 400
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
+EN +K + +++E + +LASNTSTI +N + + G HFF+P H MPL
Sbjct: 401 VENPKIKAAVLSEVEGLIGENTVLASNTSTIPINHLAKSLQRPQNFCGMHFFNPVHRMPL 460
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+R QTS I ++ ++ KTPIVV +C GF VNR+ FPY +L+ G D
Sbjct: 461 VEIIRGEQTSDSTIAAVVAYATRMGKTPIVVNDCPGFFVNRVLFPYFAGFSMLLRDGADF 520
Query: 355 YLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKR 411
ID+ + K FG PMGP L D+VG A FPER K I +M +++R
Sbjct: 521 RQIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMGKDYRDAIDVMFDNQR 580
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ + GFY Y + K P K E+ ++ P+ +S+++I+ + P++
Sbjct: 581 FGQKNQLGFYRYSQDNKGKPR---KDNDEQTDALLAAVSQPR-QTISDEEIIARMMIPMI 636
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
NE R E I A+ D+A V G+GFPP+ F
Sbjct: 637 NEVVRCLEENIIASPAEADMALVYGIGFPPFHGGAF 672
>gi|304310649|ref|YP_003810247.1| alpha subunit of fatty acid oxidation complex [gamma
proteobacterium HdN1]
gi|301796382|emb|CBL44590.1| Alpha subunit of fatty acid oxidation complex [gamma
proteobacterium HdN1]
Length = 715
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 167/507 (32%), Positives = 257/507 (50%), Gaps = 25/507 (4%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG----EARE 64
K E+A G+VDAVVAP L A ++ + + A + +K++PL E
Sbjct: 175 KPEKAIKDGVVDAVVAPELLKDAAVALVKQCIDGKLDYKAR--RQEKLDPLKLPPMENMM 232
Query: 65 IFKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F+ A QA N P+ + V++ L+ EA+ F K+ ++ ++V
Sbjct: 233 AFQTCTAAVMGQAGRNYPAPVAAVQVMQQHAAMKRDQALEVEAKGFAKVAKTSVATAMVG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K+ G + P VK+ A+LG G+MG GIA P+I+K++ ++ L
Sbjct: 293 LFLNDQAVKKISGKWEKQSKP--VKQAAVLGAGIMGGGIAFQSASKGTPIIMKDIRDEAL 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
+ G+ L RV+K KM KT+S + L++ F +VD+V+EA++EN +KQ
Sbjct: 351 DLGMAEATKLLARRVEKKKMKPADMGKTLSAIRPTLNFGDFGNVDIVVEAVVENEKIKQS 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A+ E ILASNTSTI + + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAETEALVKEDTILASNTSTISITRLATALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S + + KK+ KTPIVV +C GF VNR+ FPY +L+ G D +D+ + K
Sbjct: 471 SDAAVAATVAYAKKMGKTPIVVNDCPGFLVNRVLFPYFGGFGMLLRDGADFQKVDKVMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETTRKGF 420
FG PMGP L D+VG + E FPER YK +M E+KR G+ GF
Sbjct: 531 FGWPMGPAYLMDVVGIDTGVHAAKVMAEGFPERMQYDYKDA-SEVMYENKRYGQKNGVGF 589
Query: 421 YLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
Y Y + K P DP + I+ S S +++I++ + P+ E R
Sbjct: 590 YKYSKDAKGKPKKEADPATYELIKPVVSAS--------RDFEDQEIIDRLMIPMCLEIVR 641
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
EGI A+ D+A +MG+GFPP+R
Sbjct: 642 CVEEGIVSTVAEADMALIMGIGFPPFR 668
>gi|395444455|ref|YP_006384708.1| FadB 3 [Pseudomonas putida ND6]
gi|388558452|gb|AFK67593.1| FadB 3 [Pseudomonas putida ND6]
Length = 715
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|421522128|ref|ZP_15968774.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas putida LS46]
gi|402754127|gb|EJX14615.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas putida LS46]
Length = 715
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|270264327|ref|ZP_06192594.1| fatty acid oxidation complex subunit alpha [Serratia odorifera
4Rx13]
gi|270041976|gb|EFA15073.1| fatty acid oxidation complex subunit alpha [Serratia odorifera
4Rx13]
Length = 729
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 261/516 (50%), Gaps = 18/516 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K V ++A +GLVDAVVAP +LV A + ++ W A Y+ K++PL
Sbjct: 166 IIAAGKDVSAKDALKVGLVDAVVAPEKLVEAALKMLQQAIDGHLNWRA--YRQPKLDPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + A + P+ + +EA G L+ E F L RS
Sbjct: 224 LSPIEAAMSFTTAKGMVLQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARS 283
Query: 116 ETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++LV IF Q S+ + AP K+ A+LG G+MG GIA L PVI
Sbjct: 284 NEARALVGIFLNDQFVKSQAKKLAKNAEAP---KQAAVLGAGIMGGGIAYQSALKGVPVI 340
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K++++K L G+ L ++++GK+ K + +S + LDY + +++EA+
Sbjct: 341 MKDISDKSLALGMNEAAKLLNKQLERGKLDGMKMAQVLSTIQPTLDYAGIERAQVIVEAV 400
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
+EN +K + +++E +LASNTSTI +N + + G HFF+P H MPL
Sbjct: 401 VENPKIKAAVLSEVEGLIGEDTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRMPL 460
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+R QTS I ++ ++ KTPIVV +C GF VNR+ FPY +L+ G D
Sbjct: 461 VEIIRGEQTSDNTIAAVVAYATRMGKTPIVVNDCPGFFVNRVLFPYFAGFSMLLRDGVDF 520
Query: 355 YLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKR 411
ID+ + K FG PMGP L D+VG A FPER K I +M +++R
Sbjct: 521 RQIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMGKDYRDAIDVMFDNQR 580
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ + GFY Y + K P K E+ ++ P+ +S+++++ + P++
Sbjct: 581 FGQKNQLGFYRYSQDNKGKPR---KDNDEQTDALLAAVSQPR-QTISDEEVIARMMIPMI 636
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
NE R E I A+ D+A V G+GFPP+ F
Sbjct: 637 NEVVRCLEENIIASPAEADMALVYGIGFPPFHGGAF 672
>gi|393761509|ref|ZP_10350146.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella agri BL06]
gi|392607519|gb|EIW90393.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella agri BL06]
Length = 711
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 265/506 (52%), Gaps = 15/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI-EPL 59
M+LT K ++ +A LGLVD VV + L+ A + AL R +L DK+ E
Sbjct: 168 MILTGKQLRAAQAKKLGLVDEVVPESILLDAAVKKALAGKPRREAKKQSLL--DKLLENT 225
Query: 60 GEARE-IFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
G R+ +F A Q +K N + I+V++ GV G + GL EA+ F +L +
Sbjct: 226 GPGRKLVFSQALKQTLKKTQGNYPAALRIIEVIQTGVEQGYQKGLAAEAKAFGQLCMTSE 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIAT-ALILSNYPVILK 176
+L IFFA K G D PR+V+K A+LGGGLMG GIA + + PV +K
Sbjct: 286 SAALRSIFFATTQMKKESGAGDA--KPRKVRKAAVLGGGLMGGGIANVSATKAGVPVRIK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ + + L + KK +++ + +K + L+TG DY F +VD+V+EA+ E
Sbjct: 344 DIAEQGINNALKYSFDILNKKYKKRFISKAEMQKQLLLITGTTDYSGFHNVDIVVEAVFE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++SLKQQ+ AD+E++C H I ASNTS++ ++ I E+ + ++G H+FSP MPL+E
Sbjct: 404 DLSLKQQMVADIEQHCAEHTIFASNTSSLPIHKIAEKAARPENVIGLHYFSPVDKMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++ ++TS + I + +K KTPIVV + GF VNR+ Y A ++ G +
Sbjct: 464 VIAHDKTSAETIATTVAFARKQGKTPIVVKDGAGFYVNRILALYMNEAANILLAGEPVEK 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
IDRA+ KFG P+GP L D VG V ER + D R G+ T
Sbjct: 524 IDRALVKFGFPVGPVTLLDEVGIDVGAKISPILTAELGERFAAPAAFDKLLADGRKGKKT 583
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
KGFYLY + K K E ++ GV P L+ +I ++NEA R
Sbjct: 584 EKGFYLYGKAAKKG----KKLVDESVYAVLGVTPAP---ALNSDEIASRCTAQMLNEAVR 636
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPY 502
EGI A D DI ++ G+GFPP+
Sbjct: 637 CLEEGIIASARDGDIGAIFGIGFPPF 662
>gi|292492128|ref|YP_003527567.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
halophilus Nc4]
gi|291580723|gb|ADE15180.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
halophilus Nc4]
Length = 746
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 236/438 (53%), Gaps = 13/438 (2%)
Query: 71 AQARKQAPNLTH-----PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
+QA+K+ + TH P+ ++V+ G+ G AG + E E F L S ++L+ +F
Sbjct: 256 SQAKKKVLSHTHGNLPAPLQALEVIRTGIEEGLEAGFKAEVEAFGDLAVSTKARNLMALF 315
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKEVNEKFLE 184
A+ K G T+ + PR V KV +LG GLMGSG+ + PV LK+V+ + L
Sbjct: 316 LARSALKKDLG-TEAEVTPRAVHKVGVLGAGLMGSGVTYVTAAEAGLPVRLKDVSHEVLR 374
Query: 185 AGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQI 244
G+ + + +V+K +MT + ++ ++L+ +Y FK D+VIEA++EN+ +K Q+
Sbjct: 375 QGLRSLWKAVTEQVQKRRMTLGERDRVLALVRPTTEYTGFKRADVVIEAVVENIEVKHQV 434
Query: 245 FADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTS 304
++E + P I ASNTS+I ++ I E ++ + ++G H+FSP +PLLE+V T +T+
Sbjct: 435 LREVEAHGGPEMIFASNTSSIPIHKIAEASHHPEAVIGMHYFSPVPKVPLLEVVVTEKTA 494
Query: 305 PQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKF 364
P+V+ + +GK+ KT IVV + GF R+ PY A L+ G + IDRA+ F
Sbjct: 495 PEVVATCVALGKRQNKTVIVVRDGAGFYTTRILGPYINEATHLLAEGVSIEDIDRALINF 554
Query: 365 GMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYD 424
G P+GP +L D VG V E F ER + ++ + R G+ +GFY Y
Sbjct: 555 GFPVGPIKLLDEVGIDVVQKIAQILQEAFGERMKPTSVLEKLVGADRFGKKNGQGFYRYQ 614
Query: 425 ERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
+ +V K + + + + P K+ +I P+VNEA +++GI
Sbjct: 615 KVEGVFKGKQVDKSVYQL-----LDVKP-HKKIEANEIAMRCLLPMVNEAVYCYSDGILR 668
Query: 485 KAADLDIASVMGMGFPPY 502
A D D+ +V G+GFPP+
Sbjct: 669 SARDGDVGAVFGLGFPPF 686
>gi|333899497|ref|YP_004473370.1| 3-hydroxybutyryl-CoA epimerase [Pseudomonas fulva 12-X]
gi|333114762|gb|AEF21276.1| 3-hydroxybutyryl-CoA epimerase [Pseudomonas fulva 12-X]
Length = 692
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 229/445 (51%), Gaps = 7/445 (1%)
Query: 66 FKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIF 125
F+ Q ++ P P + + +E AG+ E E F +S +L H+F
Sbjct: 210 FRERATQLLRKLPGQEAPPLALQALEQASRLSFEAGMAHEREVFIARRQSRQAHALRHVF 269
Query: 126 FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
FA+R + V R ++ VA++G G+MGSGIA L + +L + E+ L+
Sbjct: 270 FAERDLASRARVLGKRAPTRPIEAVAVIGAGMMGSGIALCLANAGIATLLVDTQEQALQR 329
Query: 186 GIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIF 245
G V Q V+KGK+ ++ + SL+ ES D++IEA+ E++++KQ +F
Sbjct: 330 GRSVVEGYFQGLVEKGKLDADEAARRTSLIRYDATLESVAGADLIIEAVFEDLAVKQDVF 389
Query: 246 ADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSP 305
L+++ P ILA+NTS +D+ I T +VG HFFSPA VM LLE+VRT Q +P
Sbjct: 390 RQLDQFAKPGAILATNTSYLDVTAIASATARPSDVVGMHFFSPAQVMKLLEVVRTPQVAP 449
Query: 306 QVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFG 365
+V+ +L +G ++ KT I VGNC GF NR+ + A L+E G +DR I FG
Sbjct: 450 EVLASVLQLGARLGKTSIAVGNCYGFVGNRLLAVREREAGFLLEEGASPQDVDRVIRGFG 509
Query: 366 MPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDE 425
PMGPF L DL GV IA + + E + +I + R G+ + G+Y Y +
Sbjct: 510 FPMGPFELRDLS--GVDIAWRNRQARDLSEAERRCDLIEQLHAAGRLGQKSGAGYYRYQQ 567
Query: 426 -RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
+R+ D V + + R G I P+ + +++I++ F ++NEA + +GI
Sbjct: 568 GQRRGVEDVFVSDLLAEHRRRRG--ITPR--SIGDEEILQRCLFVMINEAAHLLEQGIVD 623
Query: 485 KAADLDIASVMGMGFPPYRFVTFIH 509
A D+D+ + G GFP YR H
Sbjct: 624 SANDIDLVWLHGYGFPRYRGGLLYH 648
>gi|397693373|ref|YP_006531253.1| Fatty acid oxidation complex subunit alpha [Pseudomonas putida
DOT-T1E]
gi|397330103|gb|AFO46462.1| Fatty acid oxidation complex subunit alpha [Pseudomonas putida
DOT-T1E]
Length = 715
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 259/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP L++ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLLAGALDLIKRAIGGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|81460515|sp|Q8ECP7.1|FADJ_SHEON RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
Length = 707
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 258/507 (50%), Gaps = 19/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL + +P +L +E G
Sbjct: 167 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKQIAKPVKKSLV-NQLLEGTG 225
Query: 61 EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I + A+ A+K N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 226 FGRNIIFDQAAKQVAKKTQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKES 285
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G PR+VKK ILGGGLMG GIA+ + P +K+
Sbjct: 286 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKD 343
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+NEK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 344 INEKGLSNALSYAYKLLDKGVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFED 403
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ + I + + ++G H+FSP MPL+E+
Sbjct: 404 LALKHQMVKDIERECGEHTIFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEV 463
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 464 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 523
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 524 DKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLSDDRKGRKNG 583
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KGFY Y K K E + G+ +D + + ++E+ +V+M+ NEA
Sbjct: 584 KGFYQYGAASKK------KAVDETVYGVLGIKPGVDKEMSAVAERCVVQML-----NEAV 632
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
R GI D DI ++ G+GFPP+
Sbjct: 633 RCLDAGIIASPRDGDIGAIFGIGFPPF 659
>gi|414562119|ref|NP_718651.2| anaerobic fatty oxidation complex alpha subunit FadJ [Shewanella
oneidensis MR-1]
gi|410519869|gb|AAN56095.2| anaerobic fatty oxidation complex alpha subunit FadJ [Shewanella
oneidensis MR-1]
Length = 705
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 258/507 (50%), Gaps = 19/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL + +P +L +E G
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKQIAKPVKKSLV-NQLLEGTG 223
Query: 61 EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I + A+ A+K N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQAAKQVAKKTQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G PR+VKK ILGGGLMG GIA+ + P +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+NEK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 342 INEKGLSNALSYAYKLLDKGVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ + I + + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLSDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KGFY Y K K E + G+ +D + + ++E+ +V+M+ NEA
Sbjct: 582 KGFYQYGAASKK------KAVDETVYGVLGIKPGVDKEMSAVAERCVVQML-----NEAV 630
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
R GI D DI ++ G+GFPP+
Sbjct: 631 RCLDAGIIASPRDGDIGAIFGIGFPPF 657
>gi|163751693|ref|ZP_02158912.1| fatty oxidation complex, alpha subunit [Shewanella benthica KT99]
gi|161328432|gb|EDP99588.1| fatty oxidation complex, alpha subunit [Shewanella benthica KT99]
Length = 717
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 167/512 (32%), Positives = 258/512 (50%), Gaps = 24/512 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
+ K + E A +G +DA+VAP L + A Q D + + W + + L +
Sbjct: 169 SGKDQRPEAALKVGAIDAIVAPENLQAAAIQMIKDAVAEKLDWQSRRARKQAPLTLPKLE 228
Query: 64 EIFKFARAQ------ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ FA A+ A K P P+ I V+E L+ E + F KL +++
Sbjct: 229 AMMSFATAKGMVFKIAGKHYP---APMTAISVIEQAANLKRDEALKIEHQAFVKLAKTDV 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ IF + G ++V A+LG G+MG GIA P+++K+
Sbjct: 286 AQALIGIFLNDQLVKGK--AKKAGKLAKKVDTAAVLGAGIMGGGIAYQSASKGTPIVMKD 343
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + LE G+G L +++K+G+ T EK K ++ +T LDY KDVD+V+EA++E+
Sbjct: 344 ITQPALELGLGEASKLLAAQIKRGRSTPEKMAKVLNNITATLDYAPVKDVDLVVEAVVEH 403
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + A++E++ I+ SNTSTI +NL+ + +R G HFF+P H MPL+EI
Sbjct: 404 PKVKAMVLAEVEQHVADDAIITSNTSTISINLLAKALKKPERFCGMHFFNPVHKMPLVEI 463
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +S + I ++ K+ KTPIVV +C GF +NR+ FPY L+ G D I
Sbjct: 464 IRGEHSSEETIATVVAYASKMGKTPIVVNDCPGFFINRVLFPYFAGFSGLLADGGDFAAI 523
Query: 358 DRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRAGE 414
D+ + K FG PMGP L D+VG E FP+R K I IM E +R G+
Sbjct: 524 DKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMAKEGKDAIDIMFEAQRFGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLS--EKD-IVEMIFFPVV 471
KGFY Y R+ P +V ++S + +F +L E D I+ P++
Sbjct: 584 KNSKGFYAYSVDRRGKPKKDVD-------AISYELLGAEFGELKQFESDVIIARTMIPMI 636
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R EGI A+ D+ V G+GFPP+R
Sbjct: 637 IETVRCLEEGIIASPAEADMGLVYGLGFPPFR 668
>gi|392421485|ref|YP_006458089.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri CCUG 29243]
gi|390983673|gb|AFM33666.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri CCUG 29243]
Length = 715
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 257/509 (50%), Gaps = 19/509 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A + VDAVVAP++L V A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVHAVDAVVAPDKLQAAALDLVKRAISGELDYKAKRQPKLDKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ ++ EA F KL ++
Sbjct: 229 EQMMAFETSKAFVAGQA---GPNYPAPVEAIKTIQKAANFTRDKAIEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SLV +F + + K D R VK A+LG G+MG GIA + P+++K
Sbjct: 286 VAQSLVGLFLSDQELKKKAKAYDK--QARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T +K + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLDEASKLLGKRVEKGRLTADKMAQALNAIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + A++E++ I+ASNTSTI +N + + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKHAVLAEVEEHVREDAIIASNTSTISINYLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS I + KK+ K+P+VV +C GF VNR+ FPY + G D
Sbjct: 464 VIRGEKTSEVAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGE 414
D+ + KFG PMGP L D+VG E FP+R + +M E R G+
Sbjct: 524 ADKVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY Y+ ++ P KK ++ I + +LS++DI+ + P+ E
Sbjct: 584 KNGKGFYAYEMDKRGKP----KKVVDAEAYELLKPIVAETRELSDEDIINYMMIPLCLET 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AA+ D+ + G+GFPP+R
Sbjct: 640 VRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|409398445|ref|ZP_11249251.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. Chol1]
gi|409117164|gb|EKM93600.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas sp. Chol1]
Length = 715
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 255/509 (50%), Gaps = 19/509 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A + VDAVVAP +L V A LD R+P + L K + I
Sbjct: 170 SGKENGAEDALKVHAVDAVVAPEKLQEAALDLVKRAISGELDYKAKRQPKLDKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETTKAFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + K D R VK A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLSDQELKKKAKAYDK--QARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T EK + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLDEASKLLGKRVEKGRLTPEKMAQALNAIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + A++E + I+ASNTSTI ++ + + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKHAVLAEVEGHVREDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS I + KK+ K+P+VV +C GF VNR+ FPY + G D
Sbjct: 464 VIRGEKTSEVAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGE 414
D+ + KFG PMGP L D+VG E FP+R + +M E R G+
Sbjct: 524 ADKVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDSKTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY Y+ +K P KK ++ I + +LS++DI+ + P+ E
Sbjct: 584 KNGKGFYAYEMDKKGKP----KKVVDAQAYELLKPIVAETRELSDEDIINYMMIPLCLET 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AA+ D+ + G+GFPP+R
Sbjct: 640 VRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|345300205|ref|YP_004829563.1| Fatty acid oxidation complex subunit alpha [Enterobacter asburiae
LF7a]
gi|345094142|gb|AEN65778.1| Fatty acid oxidation complex subunit alpha [Enterobacter asburiae
LF7a]
Length = 715
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 256/513 (49%), Gaps = 32/513 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
M+LT K ++ +A GLVD VV + L+ A + AL R L ++I P
Sbjct: 167 MILTGKQLRARQALKTGLVDEVVPYSILLEAAVERAL----KGRQAKPHLPVRERILAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
LG A + A+K N ++V+E G+ G +G EA+ F +L +
Sbjct: 223 LGRALLFSMVGKKTAQKTKGNYPATTRILEVIETGLAHGSSSGYAAEAKAFGELAMTPQS 282
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
++L IFFA K PG +D A R V G G TA PV +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAEPASLRAVGVLGGGLMGGGIAFVTA-SKGKLPVRIKDI 340
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N K + + L +VK+ + + +K ++L++G DY F D+VIEA+ E++
Sbjct: 341 NPKGINHALQYSWQQLDQKVKRRHIKASERDKVLALISGTTDYSGFAHRDLVIEAVFEDL 400
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+LKQ++ AD+E+YC PH I ASNTS++ + I ++++G HFFSP MPL+E++
Sbjct: 401 ALKQKMVADVEQYCAPHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEVI 460
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
TSPQ I ++ + K KTP+VV + GF VNR+ PY A L+ G + +D
Sbjct: 461 PHATTSPQTIATVVKLAKMQGKTPVVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVD 520
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY------KSMIIPIMQEDKRA 412
++ KFG P+GP +L D VG I TG + I E Y + I+ ++ +D R
Sbjct: 521 ESLVKFGFPVGPIQLLDEVG----IDTGTKIIPVL-EAAYGDRFSPPANIVSVILKDDRK 575
Query: 413 GETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
G +GFYLY ++ + S DP V I S +G KLS E
Sbjct: 576 GRKNERGFYLYAQKGRKSKKQVDPSVYGLI----SATGQ------GKLSAVQCAERCVMM 625
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E + A D DI +V G+GFPP+
Sbjct: 626 MLNEAARCFGEQVIKSARDGDIGAVFGIGFPPF 658
>gi|398846065|ref|ZP_10603066.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM84]
gi|398252934|gb|EJN38090.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM84]
Length = 715
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 257/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLQAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGKRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|398940428|ref|ZP_10669245.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp.
GM41(2012)]
gi|398162946|gb|EJM51124.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp.
GM41(2012)]
Length = 715
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 254/506 (50%), Gaps = 27/506 (5%)
Query: 11 EEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
E+A +G VDAVVAP +L+ A D R+P + L K + IE +
Sbjct: 177 EDALKVGAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKL-KLNAIEQMMSFE 235
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F QA PN P+ I ++ G L+ EA F KL ++ +SL+
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEANGFVKLAKTSAAQSLIG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K D + VK+ A+LG G+MG GIA P+++K++NE +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++EN +KQ
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAEVEGKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S + + KK+ K PIVV +C GF VNR+ FPY LV G D ID+ + K
Sbjct: 471 SEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG E FP+R + I ++ E KR G+ KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFY 590
Query: 422 LYDE----RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y+ ++K DP V + ++ I + +++++DI+ + P+ E R
Sbjct: 591 AYETDKRGKQKKVADPSVLEVLK--------PIVFEQLEVTDEDIINWMMIPLCLETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
+ I AA+ D+ V G+GFPP+R
Sbjct: 643 LEDRIVETAAEADMGLVYGIGFPPFR 668
>gi|431927766|ref|YP_007240800.1| fatty acid oxidation complex subunit FadB [Pseudomonas stutzeri
RCH2]
gi|431826053|gb|AGA87170.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas stutzeri
RCH2]
Length = 715
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 162/509 (31%), Positives = 256/509 (50%), Gaps = 19/509 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A + VDAVVAP++L V A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVHAVDAVVAPDKLQAAALDLVKRAISGELDYKAKRQPKLDKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ ++ EA F KL ++
Sbjct: 229 EQMMAFETSKAFVAGQA---GPNYPAPVEAIKTIQKAANFTRDKAIEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SLV +F + + K D R VK A+LG G+MG GIA + P+++K
Sbjct: 286 VAQSLVGLFLSDQELKKKAKAYDK--QARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T +K + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLDEASKLLGKRVEKGRLTADKMAQALNAIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + A++E + I+ASNTSTI +N + + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKHAVLAEVEGHVREDAIIASNTSTISINYLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS I + KK+ K+P+VV +C GF VNR+ FPY + G D
Sbjct: 464 VIRGEKTSEVAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGE 414
D+ + KFG PMGP L D+VG E FP+R + +M E R G+
Sbjct: 524 ADKVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY Y+ +K P KK ++ I + +LS++DI+ + P+ E
Sbjct: 584 KNGKGFYAYEMDKKGKP----KKVVDAQAYELLKPIVAETRELSDEDIINYMMIPLCLET 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AA+ D+ + G+GFPP+R
Sbjct: 640 VRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|407789605|ref|ZP_11136705.1| multifunctional fatty acid oxidation complex subunit alpha
[Gallaecimonas xiamenensis 3-C-1]
gi|407206265|gb|EKE76223.1| multifunctional fatty acid oxidation complex subunit alpha
[Gallaecimonas xiamenensis 3-C-1]
Length = 717
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 181/509 (35%), Positives = 268/509 (52%), Gaps = 14/509 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ +A GLVD VV + L+ A A + R V +K +E G
Sbjct: 166 MMLTGKQLRPAQAKKAGLVDEVVPQSILLDVAIGLAKKG-KPLRDGVKLGFKDKLLEDNG 224
Query: 61 EAREI-FKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I F AR +K + P+ ++ V G+ G AGL EA+ F +L+++
Sbjct: 225 VGRNIVFDQARKTVLKKTGGHYPAPLKILECVRVGMTDGMDAGLAVEAKYFGELVKTPES 284
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
K L +FFA K G G+ PR+V K A+LGGGLMG GIA + + PV +K+
Sbjct: 285 KQLRGLFFATTQMKKETGAE--GVTPRKVAKAAVLGGGLMGGGIANVTVTKAGVPVRIKD 342
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ E+ + L +VK+ + + + +K + +LTG Y F DVD+V+EA+ E+
Sbjct: 343 IGEQGISHAFKYSYDLLMKKVKRRHLRKSQAQKQMMMLTGDTQYRGFHDVDIVVEAVFED 402
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E +C P I ASNTS++ + I E + ++G H+FSP MPL EI
Sbjct: 403 LALKHQMVKDIETHCGPETIFASNTSSLPIGQIAEAAQRPENVIGLHYFSPVDKMPLAEI 462
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPY-TQAAFLLVERGTDLYL 356
+ ++TSPQ I + ++ KTPIVV + GF VNR+ Y +AA+LL+E G +
Sbjct: 463 IAHDKTSPQTIATTVAFARRQGKTPIVVKDGAGFYVNRILGLYMNEAAYLLME-GEPVEK 521
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+D+A+T FGMP+GP L D VG V + ER + D R G+ +
Sbjct: 522 LDKALTAFGMPVGPMTLLDEVGIDVGAKIAPILEKELGERFQAPAAFDKLLADGRKGKKS 581
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARSMS---GVAIDPKFAKLSEKDIVEMIFFPVVNE 473
+KGFYLY + K S +P +KK +K S + I P +L I E ++NE
Sbjct: 582 QKGFYLYKDLPK-SWNP-LKKLPKKPVDESVYRVLGISPA-GRLDLDAIAERTLLQMLNE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPY 502
A R EGI A D DI ++ G+GFPP+
Sbjct: 639 AARCLDEGIIQSARDGDIGAIFGIGFPPF 667
>gi|317494891|ref|ZP_07953302.1| fatty oxidation complex [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917216|gb|EFV38564.1| fatty oxidation complex [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 734
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/516 (32%), Positives = 259/516 (50%), Gaps = 18/516 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K + E+A +GLVDAVV ++L+S A ++ + W A Y+ K+EPL
Sbjct: 166 IIAAGKDIGAEQALKVGLVDAVVPQDKLISGALNMLRQAIDGQLDWQA--YRQPKLEPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
E+ F A+ + A + PI + +EA L+ E F L R+
Sbjct: 224 LSPIESLMSFTTAKGMVMQTAGKHYPAPITAVKTIEAAAGLKRTEALKLETASFVPLTRT 283
Query: 116 ETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++LV IF Q K + G P +LG G+MG GIA L PV+
Sbjct: 284 TQARALVGIFLNDQFVKGKAKKLAQSGQVPTHA---VVLGAGIMGGGIAYQSALKGVPVL 340
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+++EK L+ G+ L ++++GK+ K + IS + L+Y + +V+EA+
Sbjct: 341 MKDISEKSLQLGMNEAGKLLNKQLERGKINGLKMAQIISTIQPTLNYAGIEQAQIVVEAV 400
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
+EN +K + A+ E P +LASNTSTI ++ + + G HFF+P H MPL
Sbjct: 401 VENPKIKAAVLAEAESLIKPDAVLASNTSTIPIDQLAASLQRPENFCGMHFFNPVHRMPL 460
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+R +TS Q I ++ K+ KTPIVV +C GF VNR+ FPY LL+ G D
Sbjct: 461 VEIIRGAKTSEQTIGTVVAYATKMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADF 520
Query: 355 YLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKR 411
+D+ + K FG PMGP L D+VG A + FP+R K+ + +M + +R
Sbjct: 521 RQVDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAQGFPQRMSKNYRDAVDVMFDAQR 580
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ GFY YD+ K P +K ++ + + P S+++I+ + P++
Sbjct: 581 FGQKNGVGFYRYDQDSKGKP----RKVQDEQTPLLLAEVAPSNENFSDEEIIARMMIPMI 636
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
NE R F E I A+ D+A V G+GFPP+ F
Sbjct: 637 NEVVRCFEEKIVASPAEADMALVYGIGFPPFHGGAF 672
>gi|392535223|ref|ZP_10282360.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudoalteromonas arctica A 37-1-2]
Length = 735
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 267/527 (50%), Gaps = 22/527 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDIL-EHRRPWVATLYKTDKIEPLG 60
MLT K ++ ++A G++D V + L+ A+++A + + P + + K + P G
Sbjct: 166 MLTGKQIRPKQAKKAGVLDDCVPHSVLLKVAKEFATKKKPQAKEPKLDNISKLLESNPFG 225
Query: 61 EAREIFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
IFK A+ +K + P+ I V A V + EAE F L+ S+ K
Sbjct: 226 R-NFIFKKAKENVLKKTGGHYPAPLAIIKAVRASVELDELKAYKTEAESFATLVMSDESK 284
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKEV 178
+L IFFA K D AP + K A+LGGGLMG+GIA + + + PV +K+V
Sbjct: 285 ALRGIFFATTEMKKEWRNDD---APA-ISKTAVLGGGLMGAGIAHVSAVKAKVPVRIKDV 340
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
E+ + + L R+K+ M++ + T++ +TG DY FK +D+VIEA+ E++
Sbjct: 341 AEQGISNAMSYTYKILDKRLKRRIMSKADVQLTMNRITGTTDYSGFKHIDLVIEAVFEDL 400
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+LKQ + AD+E+ C + I ASNTS++ ++ I + + ++G H+FSP MPL+EI+
Sbjct: 401 ALKQGMVADVEQQCQANTIFASNTSSLPISQIAAQAARPENVIGLHYFSPVEKMPLVEII 460
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
TS + I +++ +K KTPIVV + GF VNR+ PY A L+ G + ID
Sbjct: 461 PHEGTSQETIARVVNFARKQGKTPIVVKDMAGFYVNRILAPYLNEAANLMLAGEPIEKID 520
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ +FG P+GP L D VG + + ER M + KR G + +
Sbjct: 521 AALVEFGFPVGPLALLDEVGIDIGSKIAPILEKELGERFKGPDAFMRMIDSKRLGRKSGR 580
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY YD++ KK E + GV P +L++ +I + ++NEA R
Sbjct: 581 GFYEYDKKG--------KKVDESVYELLGVTPAP---RLNKSEIAKRCVSQMLNEAVRCL 629
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR---FVTFIHRGFSKSSSCFKNL 522
+GI D DI ++ G+GFPP+ F G SK SS L
Sbjct: 630 DDGIIASPRDGDIGAIFGIGFPPFLGGPFSYMDKLGASKISSDMSTL 676
>gi|378951892|ref|YP_005209380.1| protein FaoA [Pseudomonas fluorescens F113]
gi|359761906|gb|AEV63985.1| FaoA [Pseudomonas fluorescens F113]
Length = 715
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 253/509 (49%), Gaps = 19/509 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQ-------WALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVV P +L A + D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVEPGKLQEAALETLKRAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAASFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IASDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEHAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + ++ E KR G+
Sbjct: 524 IDKIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY Y+ ++ KK + + I + +++++DI+ + P+ E
Sbjct: 584 KNGKGFYAYETDKRGKQ----KKVADSSVLEVLKPIVYEQREVTDEDIINWMMIPLCLET 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AA+ D+ V G+GFPP+R
Sbjct: 640 VRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|339493697|ref|YP_004713990.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338801069|gb|AEJ04901.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 715
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/513 (31%), Positives = 257/513 (50%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A + VDAVVAP +L V A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVHAVDAVVAPEKLQEAALDLVKRAISGELDYKAKRQPKLDKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETSKAFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SLV +F + + K D R VK A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLVGLFLSDQELKKKAKAYDK--QARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T +K + ++ + + Y F VD+V+EA++E
Sbjct: 344 DIREEGIQMGLDEASKLLGKRVEKGRLTADKMAQALNAIRPTMSYGDFGTVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + A++E + I+ASNTSTI ++ + + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKHAVLAEVEGHVREDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS I + KK+ K+P+VV +C GF VNR+ FPY + G D
Sbjct: 464 VIRGEKTSETAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGE 414
D+ + KFG PMGP L D+VG E FP+R + +M + R G+
Sbjct: 524 ADKVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYDANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K P DP+ + ++ I + +LS++DI+ + P+
Sbjct: 584 KNGKGFYAYEMDKKGKPKKVVDPQAYELLK--------PIVAETRELSDEDIINYMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|291615754|ref|YP_003518496.1| FadB [Pantoea ananatis LMG 20103]
gi|291150784|gb|ADD75368.1| FadB [Pantoea ananatis LMG 20103]
Length = 727
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 266/531 (50%), Gaps = 49/531 (9%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILE----------HRRPWVATL 50
++ K + G A LGLVDAVV+P++L R AL +L+ R P +A L
Sbjct: 166 IIAAGKDIDGMAALRLGLVDAVVSPDKL----RDAALTMLKAAASDGSWRARRAPKLAPL 221
Query: 51 YKTDKIEPLGEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDF 109
K+ P+ EA F A+ + A + P+ + +EA G L+ E F
Sbjct: 222 ----KLSPV-EAAMSFTIAKGMVMQTAGKHYPAPLTAVKTIEAAAALGRDDALKLETAAF 276
Query: 110 QKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRV------KKVAILGGGLMGSGIA 163
L +S+ ++LV IF + GLA +R K+ A+LG G+MG GI+
Sbjct: 277 VPLAQSDVARALVGIFLNDQYIK--------GLAKKRSSENGAPKQAAVLGAGIMGGGIS 328
Query: 164 TALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYES 223
PV +K+++ + L G+ L ++++GK+ K I+ + LDY
Sbjct: 329 YQSAWKGVPVKMKDIHPQALTLGMNEASKLLNKQLERGKIDGNKLAAVIATIQPTLDYAG 388
Query: 224 FKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGA 283
F D+V+EA++EN +K + A+ EK+ ILASNTSTI ++ + + + G
Sbjct: 389 FNQADVVVEAVVENPQIKASVLAETEKHMRSDAILASNTSTIPISQLAQALQRPENFCGM 448
Query: 284 HFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQA 343
HFF+P MPL+E+VR +TS + ++ K+ KTP+VV +C GF VNR+ FPY A
Sbjct: 449 HFFNPVPRMPLVEVVRGEKTSEATLGKVVAWASKMGKTPVVVNDCPGFFVNRVLFPYFAA 508
Query: 344 AFLLVERGTDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM- 401
+L+ G D ID+ + K FG PMGP L D+VG A + FP+R K
Sbjct: 509 FGMLLRDGADFRQIDKVMEKQFGWPMGPSWLLDVVGIDTAHHAQSVMADGFPQRMKKDYR 568
Query: 402 -IIPIMQEDKRAGETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAK 456
I I+ E KR G+ KGF+ ++E +K P DPEV +E A PK
Sbjct: 569 DAIDILFEAKRFGQKNGKGFWRWEEDKKGKPKKVSDPEVDALLEP-------ACQPKRI- 620
Query: 457 LSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
S+++I+ + P++NE R E I A+ D+A V G+GFPP+R F
Sbjct: 621 FSDEEILNRMMLPMLNEVVRCLEEKIIASPAEADMALVYGLGFPPFRGGAF 671
>gi|398998821|ref|ZP_10701578.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM18]
gi|398133048|gb|EJM22292.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM18]
Length = 715
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 168/513 (32%), Positives = 255/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVV-------APNQLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVV A L+ A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVDSQKLHEAALNLIKGAISGKFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAKEVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI + L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + ++ E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDE----RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++K DP V + ++ I + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKQKKVADPSVLEVLK--------PIVFQQLEVTDEDIINWMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|119775302|ref|YP_928042.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella amazonensis SB2B]
gi|171704644|sp|A1S7L6.1|FADJ_SHEAM RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|119767802|gb|ABM00373.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Shewanella amazonensis SB2B]
Length = 706
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 176/507 (34%), Positives = 260/507 (51%), Gaps = 18/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT K V+ ++A +GLVD VV + L+ TA + AL + R+P L T +E
Sbjct: 165 LMLTGKQVRPKQAVKMGLVDDVVPESILLDTAIEMALAGKKTRKPLKQPLV-TKLLEGTP 223
Query: 61 EAREI-FKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I F A Q +K N P+ ID V G+ G GL+ EA F L+ +
Sbjct: 224 VGRNIMFDQATKQVLKKTQGNYPSPLKIIDCVREGMAKGMEKGLEVEAAHFGALVATPES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
+L IFFA K G D PR+V K +LGGGLMG GIA+ + PV +K+
Sbjct: 284 AALRSIFFATTEMKKETGAGDA--KPRKVAKAVVLGGGLMGGGIASVTTTKAKVPVRVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+++K L +G L VK+ MT + +K ++L+T +Y KD D+V+EA+ E+
Sbjct: 342 ISDKGLSNALGYAYKLLDKGVKRRHMTSAERDKLMALMTTTTEYRGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ + I + ++G H+FSP MPL+E+
Sbjct: 402 LNLKHQMVRDIERECGEHTIFASNTSSLPITQIAAAASRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV +C GF VNR+ Y A L+ G + +
Sbjct: 462 IAHEKTSPETIATTVAFARKQGKTPIVVKDCAGFYVNRILALYMNEAAQLLLEGQAVDHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLMADDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KGFYLY + K + E S+ G+ A + +++E+ +V+M+ NEA
Sbjct: 582 KGFYLYGKAAKKGKKVD-----ESVYSLLGLTPATGKEAGEIAERCVVQML-----NEAV 631
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
R EGI D DI ++ G+GFPP+
Sbjct: 632 RCLEEGIIASPRDGDIGAIFGIGFPPF 658
>gi|343502937|ref|ZP_08740774.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
tubiashii ATCC 19109]
gi|418478661|ref|ZP_13047758.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
tubiashii NCIMB 1337 = ATCC 19106]
gi|342812921|gb|EGU47906.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
tubiashii ATCC 19109]
gi|384573696|gb|EIF04186.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
tubiashii NCIMB 1337 = ATCC 19106]
Length = 707
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/505 (31%), Positives = 257/505 (50%), Gaps = 17/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LT K ++ ++A LG+ DAVV L+ A+ + ++ K I G
Sbjct: 168 MILTGKQLRAKKAKKLGVADAVVPHTVLLDVAKSFVEKHAGKKKAKRKVSTKEKLISNTG 227
Query: 61 EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R++ + A+ K N + V+ G+ G G +KEAE F +L+ +
Sbjct: 228 LGRKVIFEQAAKKTNDKTRGNYPAADAILQVIRFGLEKGFEKGQKKEAERFGELVMTSES 287
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
K+L IFFA K G P+ + + A+LGGGLMG+GI+ ++ + PV +K+
Sbjct: 288 KALRSIFFATTEMKKEHGGD---AQPKPIARAAVLGGGLMGAGISHVSVAKAKVPVRIKD 344
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
V+ + + + + K+ +++ + + + L+G D+ F D+VIEA+ E+
Sbjct: 345 VSNDGVLNALKYNYKLFEKQRKRHILSKAQLQSKMLQLSGGTDFTRFNHTDIVIEAVFED 404
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQQ+ AD+E I A+NTS++ ++ I E+ + +VG H+FSP MPL+E+
Sbjct: 405 LNLKQQMVADIESNAKDSTIFATNTSSLPIHQIAEKAERPENVVGLHYFSPVEKMPLVEV 464
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS + I +++ +K KTPIVV +C GF VNR+ PY A ++ G + +
Sbjct: 465 IPHQGTSDETISTVVEFARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLLTGEPIEQL 524
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ FG P+GP L D VG + + ER + + D R G +
Sbjct: 525 DTALLNFGFPVGPITLLDEVGVDIGAKIMPILVAELGERFQGPDVFDKLLNDDRKGRKSG 584
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
KGFY Y ++K EV K + K S+S P+ +KL+EKDI P++NEA R
Sbjct: 585 KGFYTYKGKKK-----EVDKSVYKLLSLS-----PE-SKLAEKDIAMRCVLPMLNEAVRC 633
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EGI D DI ++ G+GFPP+
Sbjct: 634 LDEGIIRSPRDGDIGAIFGIGFPPF 658
>gi|386081257|ref|YP_005994782.1| fatty oxidation complex alpha subunit FadB [Pantoea ananatis PA13]
gi|354990438|gb|AER34562.1| fatty oxidation complex alpha subunit FadB [Pantoea ananatis PA13]
Length = 727
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 266/531 (50%), Gaps = 49/531 (9%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILE----------HRRPWVATL 50
++ K + G A LGLVDAVV+P++L R AL +L+ R P +A L
Sbjct: 166 IIAAGKDIDGMAALRLGLVDAVVSPDKL----RDAALTMLKAAASDGSWRARRAPKLAPL 221
Query: 51 YKTDKIEPLGEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDF 109
K+ P+ EA F A+ + A + P+ + +EA G L+ E F
Sbjct: 222 ----KLSPV-EAAMSFTIAKGMVMQTAGKHYPAPLTAVKTIEAAAALGRDDALKLETAAF 276
Query: 110 QKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRV------KKVAILGGGLMGSGIA 163
L +S+ ++LV IF + GLA +R K+ A+LG G+MG GI+
Sbjct: 277 VPLAQSDVARALVGIFLNDQYIK--------GLAKKRSSENGAPKQAAVLGAGIMGGGIS 328
Query: 164 TALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYES 223
PV +K+++ + L G+ L ++++GK+ K I+ + LDY
Sbjct: 329 YQSAWKGVPVKMKDIHPQALTLGMNEASKLLNKQLERGKIDGNKLAAVIATIQPTLDYAG 388
Query: 224 FKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGA 283
F D+V+EA++EN +K + A+ EK+ ILASNTSTI ++ + + + G
Sbjct: 389 FDQADVVVEAVVENPQIKASVLAETEKHMRSDAILASNTSTIPISQLAQALQRPENFCGM 448
Query: 284 HFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQA 343
HFF+P MPL+E+VR +TS + ++ K+ KTP+VV +C GF VNR+ FPY A
Sbjct: 449 HFFNPVPRMPLVEVVRGEKTSEATLGKVVAWASKMGKTPVVVNDCPGFFVNRVLFPYFAA 508
Query: 344 AFLLVERGTDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM- 401
+L+ G D ID+ + K FG PMGP L D+VG A + FP+R K
Sbjct: 509 FGMLLRDGADFRQIDKVMEKQFGWPMGPSWLLDVVGIDTAHHAQSVMADGFPQRMKKDYR 568
Query: 402 -IIPIMQEDKRAGETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAK 456
I I+ E KR G+ KGF+ ++E +K P DPEV +E A PK
Sbjct: 569 DAIDILFEAKRFGQKNGKGFWRWEEDKKGKPKKVSDPEVDALLEP-------ACQPKRI- 620
Query: 457 LSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
S+++I+ + P++NE R E I A+ D+A V G+GFPP+R F
Sbjct: 621 FSDEEILNRMMLPMLNEVVRCLEEKIIASPAEADMALVYGLGFPPFRGGAF 671
>gi|294138823|ref|YP_003554801.1| fatty oxidation complex subunit alpha [Shewanella violacea DSS12]
gi|293325292|dbj|BAJ00023.1| fatty oxidation complex, alpha subunit [Shewanella violacea DSS12]
Length = 717
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 259/516 (50%), Gaps = 24/516 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
+ K + E A +G +DA+VAP L ++A Q D + + W + L +
Sbjct: 169 SGKDQRPEAALKVGAIDAIVAPENLQASAIQMLKDAVAEKLDWQTRRARKQAPLTLPKLE 228
Query: 64 EIFKFARAQ------ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ FA A+ A K P P+ I V+E G L+ E + F KL +++
Sbjct: 229 AMMSFATAKGMVFKIAGKHYP---APMTAISVIEKAANLGRDEALKIEHQAFVKLAKTDV 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ IF + G ++V A+LG G+MG GIA P+++K+
Sbjct: 286 TQALIGIFLNDQLVKGK--AKKAGKLAKKVDTAAVLGAGIMGGGIAYQSASKGTPIVMKD 343
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + L+ G+G L +++K+G+ T EK K ++ +T LDY KDVD+V+EA++E+
Sbjct: 344 IAQPALDLGLGEASKLLAAQIKRGRSTPEKMAKVLNNITATLDYAPVKDVDLVVEAVVEH 403
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + A++E++ I+ SNTSTI +NL+ + +R G HFF+P H MPL+EI
Sbjct: 404 PKVKSMVLAEVEQHVADDAIITSNTSTISINLLAKALNKPERFCGMHFFNPVHKMPLVEI 463
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +S + I ++ K+ KTPIVV +C GF +NR+ FPY L+ G D I
Sbjct: 464 IRGENSSEETIATVVAYASKMGKTPIVVNDCPGFFINRVLFPYFAGFCGLLADGGDFAAI 523
Query: 358 DRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRAGE 414
D+ + K FG PMGP L D+VG E FP+R K I IM +R G+
Sbjct: 524 DKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMAKDGKDAIDIMFGAERFGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSE---KDIVEMIFFPVV 471
KGFY Y R+ P +V ++S + +F +L + +I+ P++
Sbjct: 584 KNSKGFYAYSVDRRGKPKKDVD-------AVSYELLGAEFGELKQFESDEIIARTMIPMI 636
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI A+ D+ V G+GFPP+R F
Sbjct: 637 IETVRCLEEGIIASPAEADMGLVYGLGFPPFRGGVF 672
>gi|330808499|ref|YP_004352961.1| multifunctional fatty acid oxidation complex [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|423696287|ref|ZP_17670777.1| fatty oxidation complex, alpha subunit [Pseudomonas fluorescens
Q8r1-96]
gi|327376607|gb|AEA67957.1| multifunctional fatty acid oxidation complex [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|388002870|gb|EIK64197.1| fatty oxidation complex, alpha subunit [Pseudomonas fluorescens
Q8r1-96]
Length = 715
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 253/509 (49%), Gaps = 19/509 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVV P +L + A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVEPGKLQEAALETIKRAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IASDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEHAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + ++ E KR G+
Sbjct: 524 IDKIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY Y+ ++ KK + + I + +++++DI+ + P+ E
Sbjct: 584 KNGKGFYAYETDKRGKQ----KKVADSSVLEVLKPIVYEQREVTDEDIINWMMIPLCLET 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AA+ D+ V G+GFPP+R
Sbjct: 640 VRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|397686464|ref|YP_006523783.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri DSM 10701]
gi|395808020|gb|AFN77425.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri DSM 10701]
Length = 715
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 256/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A + VDAVVAP +L V A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVHAVDAVVAPEKLQEAALDLVKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G ++ EA F KL ++
Sbjct: 229 EQMMAFETSKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKAIEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SLV +F + + K D R VK A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLVGLFLSDQELKKKAKNYDK--QAREVKLAAVLGAGIMGGGIAYQSAIKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG+MT K + ++ + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLDEASKLLGKRVEKGRMTPAKMAEALNAIRPTTSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E I+ASNTSTI ++L+ + + G HFF+P H+MPL+E
Sbjct: 404 NPKIKQAVLAEVEGLVREDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS I + KK+ K+P+VV +C GF VNR+ FPY + G D
Sbjct: 464 VIRGEKTSETAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGE 414
D+ + KFG PMGP L D+VG E FP+R + +M E R G+
Sbjct: 524 ADKVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDSKTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K P DP+ + ++ S + +LS++DI+ + P+
Sbjct: 584 KNGKGFYAYEVDKKGKPKKVVDPQSYELLKPIVSET--------RELSDEDIINYMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R + I AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDKIVETAAEADMGLIYGIGFPPFR 668
>gi|442322874|ref|YP_007362895.1| multifunctional fatty acid oxidation complex subunit alpha
[Myxococcus stipitatus DSM 14675]
gi|441490516|gb|AGC47211.1| multifunctional fatty acid oxidation complex subunit alpha
[Myxococcus stipitatus DSM 14675]
Length = 742
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 176/559 (31%), Positives = 273/559 (48%), Gaps = 44/559 (7%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILE------------------- 41
++LT K VK +A LG+VD VV L + A Q A ++ E
Sbjct: 173 LILTGKSVKPSKARKLGIVDEVVPTPILRAVALQRARELAEGSLKPERTRGQGLTAGGPK 232
Query: 42 ----------HRRPWVATLYKTDKIEPLGEAREIFKFARAQA-RKQAPNLTHPIVCIDVV 90
++ W + + PLG + +F AR Q +K P + V+
Sbjct: 233 GLAGFFQGLANKELWAEVALEDN---PLGR-KLLFDQARNQLLKKTRGKYPAPEKALQVI 288
Query: 91 EAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV 150
G+ SG +AGL+ EA F +L+ S+ K LV IFFA K G D + PR VKKV
Sbjct: 289 RVGLESGRKAGLEAEARAFGELVMSDVSKRLVEIFFATTALKKENGTADASVKPREVKKV 348
Query: 151 AILGGGLMGSGIA-TALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFE 209
+LGGGLMG GIA A +L V +K+ ++ + +V+ L+ RVK+ +T +
Sbjct: 349 GVLGGGLMGGGIAYVAGVLQGAQVRVKDKDDAGAGRALKQVQGILEERVKRRSLTWREAA 408
Query: 210 KTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNL 269
+ +T DY FK D+VIEA+ E++ LK +I A++E P I ASNTS+I +
Sbjct: 409 AKQAHITAGTDYSGFKSADLVIEAVFEDLKLKHRILAEVEAVTRPDAIFASNTSSIPITE 468
Query: 270 IGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCT 329
+ + + +++G H+FSP + MPLLE++ T+ V +D+G++ KT IVV +
Sbjct: 469 LAKGSQRPAQVIGMHYFSPVNKMPLLEVITHAGTADWVTATCVDVGRRQGKTVIVVNDGP 528
Query: 330 GFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQF 389
GF +R+ PY A L+ G D+ +D+A+ +FG P+GP L D VG VA G
Sbjct: 529 GFYTSRILAPYLNEAAYLLGEGADIAALDKALVEFGFPVGPMTLLDEVGIDVAHKVGPLM 588
Query: 390 IENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVA 449
F +R + + + R G ++KGFYLY+ +K DP V + +
Sbjct: 589 EAAFGKRMAAPKALDAVVAEGRLGRKSQKGFYLYENGKKREVDPSVYVLLPHGKERK--- 645
Query: 450 IDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIH 509
+ ++ E + +VNEA R EGI A D D+ ++ G+GFPP+ F +
Sbjct: 646 ------RFDAAEMAERLVLQMVNEAIRCLGEGILRSARDGDVGAIFGLGFPPFLGGPFHY 699
Query: 510 RGFSKSSSCFKNLLCYFDQ 528
++ + L Y D+
Sbjct: 700 ADSVGAAELLRKLEHYQDK 718
>gi|410628499|ref|ZP_11339218.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
gi|410151975|dbj|GAC25987.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
Length = 717
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 263/512 (51%), Gaps = 29/512 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT V+ ++A G+VD +V + L+ A + A + +R+P K++ +G
Sbjct: 175 MMLTGASVRAKQAQKYGIVDDMVPRSILLEVAIEMAKNPKPNRKPV--------KLDAMG 226
Query: 61 EARE--------IFKFARAQAR-KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQK 111
+ E +FK AR Q K N P ID +E G+ G G EA+ F
Sbjct: 227 QFLERTPVGRKLMFKQARKQTEAKTMGNYPSPERIIDCIETGLEKGKAQGFAVEAKHFGH 286
Query: 112 LLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSN 170
L+ + +L +FFA K GV G+AP+ +KK+ +LGGGLMG GIA +
Sbjct: 287 LVMTPESAALRSLFFATTEMKKENGVE--GVAPKTLKKIGVLGGGLMGGGIAFVTATKAK 344
Query: 171 YPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMV 230
P +K++ + + L +VK+ M + + +S LTG +DY F + D+V
Sbjct: 345 LPARIKDIRSDGIAHAMKYSYDILNKKVKRKFMLHSEMQSQLSRLTGSVDYVGFDNTDVV 404
Query: 231 IEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAH 290
IEA+ E+++LKQ + AD+E++C H I ASNTS+I + I + + ++G H+FSP
Sbjct: 405 IEAVFEDLALKQNMVADVEEHCSEHTIFASNTSSIPIGQIAAKAKRPENVIGLHYFSPVD 464
Query: 291 VMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVER 350
MPL E++ TS Q I +++ KK KTPIVV + GF VNR+ PY + ++
Sbjct: 465 KMPLAEVIAHEATSDQTISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLA 524
Query: 351 GTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDK 410
G + ID+A+ KFG P+GP +L D VG V G + F ER + + D
Sbjct: 525 GEPIEQIDKALVKFGFPVGPIKLLDEVGIDVGTKIGPILVAEFGERFESAPGFDKLLADD 584
Query: 411 RAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
R G+ ++GFY Y+ ++ P EV E + G+ + ++LSE I E +
Sbjct: 585 RKGKKNKRGFYNYEGKK---PGKEVD---ESVYDLLGITPN---SRLSENTIAERCVLLM 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
+NEA EG+ D DI ++ G+GFPP+
Sbjct: 636 LNEAAICLDEGVVRNPRDGDIGAIFGIGFPPF 667
>gi|359441020|ref|ZP_09230927.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Pseudoalteromonas sp.
BSi20429]
gi|358037157|dbj|GAA67176.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Pseudoalteromonas sp.
BSi20429]
Length = 735
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 266/527 (50%), Gaps = 22/527 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDIL-EHRRPWVATLYKTDKIEPLG 60
MLT K ++ +A G++D V + L+ A+++A + + P + + K + P G
Sbjct: 166 MLTGKQIRPTQAKKAGVLDDCVPHSVLLKVAKEFATKKKPQAKEPKLDNISKLLESNPFG 225
Query: 61 EAREIFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
IFK A+ +K + P+ I V A V + EAE F L+ S+ K
Sbjct: 226 R-NFIFKKAKENVLKKTGGHYPAPLAIIKAVRASVELDELKAYKTEAESFATLVMSDESK 284
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKEV 178
+L IFFA K D AP + K A+LGGGLMG+GIA + + + PV +K+V
Sbjct: 285 ALRGIFFATTEMKKEWRNDD---APA-ISKTAVLGGGLMGAGIAHVSAVKAKVPVRIKDV 340
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
E+ + + L R+K+ M++ + T++ +TG DY FK +D+VIEA+ E++
Sbjct: 341 AEQGISNAMSYTYKILDKRLKRRIMSKADVQLTMNRITGTTDYSGFKHIDLVIEAVFEDL 400
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+LKQ + AD+E+ C + I ASNTS++ ++ I + + ++G H+FSP MPL+EI+
Sbjct: 401 ALKQGMVADVEQQCQANTIFASNTSSLPISQIAAQAARPENVIGLHYFSPVEKMPLVEII 460
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
TS + I +++ +K KTPIVV + GF VNR+ PY A L+ G + ID
Sbjct: 461 PHEGTSQETIARVVNFARKQGKTPIVVKDMAGFYVNRILAPYLNEAANLMLAGEPIEKID 520
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ +FG P+GP L D VG + + ER M + KR G + +
Sbjct: 521 AALVEFGFPVGPLALLDEVGIDIGSKIAPILEKELGERFKGPDAFMRMIDSKRLGRKSGR 580
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY YD++ KK E + GV P +L++ +I + ++NEA R
Sbjct: 581 GFYEYDKKG--------KKVDESVYELLGVTPAP---RLNKSEIAKRCVSQMLNEAVRCL 629
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR---FVTFIHRGFSKSSSCFKNL 522
+GI D DI ++ G+GFPP+ F G SK SS L
Sbjct: 630 DDGIIASPRDGDIGAIFGIGFPPFLGGPFSYMDKLGASKISSDMSTL 676
>gi|169634578|ref|YP_001708314.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii SDF]
gi|254788554|sp|B0VLX4.1|FADB_ACIBS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|169153370|emb|CAP02491.1| fatty oxidation complex alpha subunit [Includes: Enoyl-CoA
hydratase ; Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase ; 3-hydroxyacyl-CoA dehydrogenase;
3-hydroxybutyryl-CoA epimerase] [Acinetobacter
baumannii]
Length = 717
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 256/509 (50%), Gaps = 13/509 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M + P K A G VDAVVA ++L+ A + R W A + + L
Sbjct: 168 MAMATPKKPAAALKDGAVDAVVAADKLLDAATDLVKQAISGRLNWKAKRQEKLEAVKLNP 227
Query: 62 AREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ F A+ A+ P + +D ++AG L+ EAE F K +
Sbjct: 228 LEQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAVTPQ 287
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ +F + K + G P V + A+LG G+MG GIA P+I+K+
Sbjct: 288 AEALIGLFINDQVVKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKD 345
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L G+ L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN
Sbjct: 346 IGNPQLALGMKEANNLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTEN 405
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K+ + A+ EK + I+ASNTSTI + + + + VG HFF+P H+MPL+E+
Sbjct: 406 PKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEV 465
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D I
Sbjct: 466 IRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQI 525
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGE 414
D ++KFG PMGP L D+VG + E FP+R YK I M E KR G+
Sbjct: 526 DNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGA-IEAMYEAKRLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY Y+ +K + K A + + + + ++I++ + + NE
Sbjct: 585 KNDVGFYKYELDKKGK---KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLALCNET 641
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R + I A++ D+A +MG+GFPP+R
Sbjct: 642 ARCLEDNIVATASEADMAMIMGIGFPPFR 670
>gi|167813999|ref|ZP_02445679.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 91]
Length = 432
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 215/385 (55%), Gaps = 7/385 (1%)
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
LVH FFAQR +K P T G APR ++++ ++GGG MG+GIA A + + +PV + E +
Sbjct: 1 GLVHAFFAQREAAKSP-ETRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERD 58
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
+ LE G V V KG+MT ++ G YE+ D+VIEA+ E+++
Sbjct: 59 DASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMA 118
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA++M LLE+V
Sbjct: 119 VKKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVV 178
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+ S V+ ++ +K+ K P+ G C GF NR+ Y AA ++E G Y IDR
Sbjct: 179 PAKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDR 238
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKG 419
AI +FG PMGP+++ DL G + AT + R I + E G+ T +G
Sbjct: 239 AIREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRG 298
Query: 420 FYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
+YLY D R +PDPEV+ I +AR+ GV+ P+ ++++IV ++NE V
Sbjct: 299 YYLYPDGARVGTPDPEVEAIIAQARAAKGVS--PR--AFTDEEIVRRYLAAMINEGANVV 354
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
E IA++ D+D + G GFP +R
Sbjct: 355 HEKIALRPLDVDAVFLHGYGFPRHR 379
>gi|222622588|gb|EEE56720.1| hypothetical protein OsJ_06222 [Oryza sativa Japonica Group]
Length = 273
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/242 (49%), Positives = 161/242 (66%), Gaps = 10/242 (4%)
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
MPLLEIVRT +TSPQ I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ + LLV G
Sbjct: 1 MPLLEIVRTEKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIG 60
Query: 352 TDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKR 411
D++ IDR I+ FGMPMGPF+L DL G+GVA+A + F R S ++ +M ++ R
Sbjct: 61 IDVFRIDRVISSFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNLDSNLVDLMVQNGR 120
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G++ KG+YLY++ K PDP V+ I++ R + K LS++DI+EMIFFPVV
Sbjct: 121 QGKSNGKGYYLYEKGGKPKPDPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVV 180
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR----------FVTFIHRGFSKSSSCFKN 521
NEACRV E + ++A+DLDIAS++GMGFP +R +IH SK + + +
Sbjct: 181 NEACRVMDENVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGD 240
Query: 522 LL 523
Sbjct: 241 FF 242
>gi|410646225|ref|ZP_11356678.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
gi|410134165|dbj|GAC05077.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
Length = 719
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/513 (33%), Positives = 259/513 (50%), Gaps = 13/513 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M T + K +A + G VDAVVAP +L A D ++ + W A + L +
Sbjct: 167 MTTGRDRKAAKALAEGAVDAVVAPEKLRDAALSMLQDAIDGKFGWQARRAQKQAPLKLNK 226
Query: 62 AREIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAG-LQKEAEDFQKLLRSET 117
+ F+ A+A A H P +D V A RAG L+ E + F KL +S+
Sbjct: 227 NESMMSFSTAKAMVFAQAGKHYPAPHAMVDTV-ANAARLDRAGALELENQGFTKLAKSDA 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
K+ V IF A + K G A + VK+ A+LG G+MG GIA + PVI+K+
Sbjct: 286 AKAQVGIFLADQ-LVKSKGKKQAKAATKDVKQTAVLGAGIMGGGIAYQSAVKGTPVIMKD 344
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N+ L+ G+ L +++GK+T T++ + L+Y + KDVD+VIEA++EN
Sbjct: 345 INQGALDLGLNEAAKILGKGMQRGKVTPAVMASTLNNIVPTLEYSAIKDVDLVIEAVVEN 404
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + + E+ ++ SNTSTI +N + E +R G HFF+P H MPL+EI
Sbjct: 405 PKVKGIVLKETEQNVSDDTVICSNTSTISINQLAESLEKPERFCGMHFFNPVHKMPLVEI 464
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +T+ I ++ K+ KTPIVV +C GF VNR+ FPY LV G D +
Sbjct: 465 IRGEKTTDATIATVVAATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLVMDGADFVAV 524
Query: 358 DRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI--MQEDKRAGE 414
D+ + K FG PMGP L D+VG A + PER K P+ + + +R G+
Sbjct: 525 DKVMEKIFGWPMGPAYLLDVVGMDTADHASSVMADGIPERMQKIENDPVTLLYKSERLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY + ++ P KK ++A + K +I+ + P+ NEA
Sbjct: 585 KNGKGFYNFSVDKRGRP---AKKAADEAYELFAPHCADK-RDFEADEIIARVMIPMANEA 640
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI AA+ D+A + G+GFPP+R F
Sbjct: 641 IRCLEEGIVGSAAEADMALLYGLGFPPFRGGVF 673
>gi|375131587|ref|YP_004993687.1| fatty oxidation complex, alpha subunit Fad [Vibrio furnissii NCTC
11218]
gi|315180761|gb|ADT87675.1| fatty oxidation complex, alpha subunit Fad [Vibrio furnissii NCTC
11218]
Length = 708
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/505 (30%), Positives = 263/505 (52%), Gaps = 17/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++LT K ++ ++A LG+VDA V L+ A+++ +D ++ V K + G
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVPHTVLLDVAKRF-IDENGKKKGKVKLTTKEKLMSQTG 226
Query: 61 EAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R++ ++ +Q +P ++V++ G+ G AGL+ EA+ F +L+ +
Sbjct: 227 FGRKVIFDQASKKTEQKTRGNYPAAKAILEVIQHGLEKGMNAGLELEAKRFGELVMTPES 286
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
K+L IFFA K G TD P V ++ +LGGGLMG+GI+ ++ + PV +K+
Sbjct: 287 KALRSIFFATTEMKKENG-TDA--TPLTVNRIGVLGGGLMGAGISHVSVAKAKVPVRIKD 343
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
V+ + + + K+ +++ + + +S L+G +D+ SF D+VIEA+ E+
Sbjct: 344 VSNDGILNALNYNYKLFDKQRKRRILSKAQLQAQMSQLSGGIDFTSFNHTDVVIEAVFED 403
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQ + AD+E I A+NTS++ ++ I + + IVG H+FSP MPL+E+
Sbjct: 404 LALKQNMVADIEANAKASTIFATNTSSLPIHHIAAKAARPENIVGLHYFSPVEKMPLVEV 463
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ + TS + I ++ + +K KTPIVV +C GF VNR+ PY + ++ G + +
Sbjct: 464 IPHDTTSDETISTVVALARKQGKTPIVVKDCAGFYVNRILAPYMNESAQILMAGEPIENL 523
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+ FG P+GP L D VG + + R + + D R G +
Sbjct: 524 DRALLDFGFPVGPITLLDEVGVDIGAKIMPILVNELGPRFQGPDVFDTLLNDGRKGRKSG 583
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
KGFY Y +K D V K ++ + P+ +K S++DI P++NEA R
Sbjct: 584 KGFYSYKGSKKKEVDKSVYKLLK---------LTPE-SKFSDQDIALRCILPMLNEAVRC 633
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EGI D DI ++ G+GFPP+
Sbjct: 634 LDEGIIRSPRDGDIGAIFGIGFPPF 658
>gi|449266986|gb|EMC77964.1| Peroxisomal bifunctional enzyme, partial [Columba livia]
Length = 703
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 170/524 (32%), Positives = 267/524 (50%), Gaps = 32/524 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ T + + EA LGLVD VV + + + R I + P +L K+ P
Sbjct: 128 IITTGRHIPATEALKLGLVDEVVKEDTIEAAIRLANKVIGQPLEPRRLSLRPVPKL-PNM 186
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EA A + +KQA P +C V A G++KE E F LL S ++
Sbjct: 187 EA--FLSEALVKLKKQARGYLAPELCFQAVRAATELPFADGVRKERELFNVLLTSGQAQA 244
Query: 121 LVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L + FFA+R K G + +P+ + K A++G G MG GI T+L+ +N PV+ E
Sbjct: 245 LQYAFFAERAVQKWTTPHGASWQNASPQPIHKAAVIGLGTMGRGIVTSLVKANIPVVALE 304
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISL-----LTGVLDYESFKDVDMVIE 232
N ++L G R + +++ M E +T+ L +D+++ +DVD+VIE
Sbjct: 305 QNLEYLNTG----RKAVMLLLEREAMKMEHGAQTLDFHNPARLQFTVDFDALRDVDLVIE 360
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A+ EN+ LK++IF L C P L +NTS ++++ I T +++G HFFSPAH+M
Sbjct: 361 AVFENMPLKKEIFQKLSGICKPAAFLCTNTSALNIDEIASATSRPQQVIGTHFFSPAHIM 420
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
LLEI+ + TSP I + + K +KK +VVGNC GFA NRM FPY + A L+E G+
Sbjct: 421 RLLEIIYGHHTSPTTIATAVQLAKVLKKVGVVVGNCFGFAGNRMMFPYVEQAVFLLEEGS 480
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAI-------ATGMQFIENFP---ERTYKSMI 402
+D+ + FG +GPFR++DL G V TG P ++
Sbjct: 481 RPEAVDQVLEDFGFKIGPFRMSDLAGLDVGWRSRKDRGLTGDSVPPGTPACQRHGHRYSP 540
Query: 403 IP-IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSE 459
+P ++ E+ R G+ T KG+Y Y++ R A PDP + + + R + K + +
Sbjct: 541 LPDLLCENGRFGQKTGKGWYQYEKAGGRTAKPDPWLHDVLTQYRDTHHI----KTRFIDQ 596
Query: 460 KDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++I+E F ++NE + AE IA LD+ + G G+P +R
Sbjct: 597 EEILERCLFSLINEGFDILAERIASDPEHLDVIYIHGYGWPKHR 640
>gi|126668302|ref|ZP_01739261.1| fused 3-hydroxybutyryl-CoA
epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
dehydrogenase [Marinobacter sp. ELB17]
gi|126627219|gb|EAZ97857.1| fused 3-hydroxybutyryl-CoA
epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
dehydrogenase [Marinobacter sp. ELB17]
Length = 715
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 163/516 (31%), Positives = 258/516 (50%), Gaps = 43/516 (8%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTA-------RQWALDILEHRRPWVATLYKTDKIEPLGE 61
+ + A +G VDA+V P++LV A LD L R + K + +E +
Sbjct: 175 RADVALKVGAVDAIVEPDKLVDAALSIIHQVNNGKLDNLARREEKKGKI-KLNVMESM-M 232
Query: 62 AREIFK-FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A EI K F A+A K P P+ I V++ ++ EA+ F K+ +++ S
Sbjct: 233 AFEISKAFVGAKAGKNYP---APVEAIKVMQKHAGMTRDKAIEVEAKGFAKMAKTDVSAS 289
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRR-------VKKVAILGGGLMGSGIATALILSNYPV 173
L+ +F + +L +R VK A+LG G+MG G+A L P+
Sbjct: 290 LIGLFLNDQ---------ELKHKAKRWAKDAADVKLAAVLGAGIMGGGVAYQSALKGTPI 340
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
I+K++N + + G+ + L R+ KG+M ++ ++ +T L+Y FK+VD+V+EA
Sbjct: 341 IMKDINPEGIALGLKEAKKLLLKRIDKGRMKPDQMADVLNSITPALNYGDFKNVDLVVEA 400
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
++EN +K + ++E IL SNTSTI ++L+ + + G HFF+P H+MP
Sbjct: 401 VVENPKVKDTVLREVEGQVREDTILTSNTSTISIDLLAKNLKRPENFCGMHFFNPVHMMP 460
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R +TS + I + + KTP+VV +C GF VNR+ FPY LV G D
Sbjct: 461 LVEVIRGKKTSDRAIATTVAYATAMGKTPVVVNDCPGFLVNRVLFPYFGGFIGLVRDGAD 520
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK--SMIIPIMQEDKR 411
+D+ + KFG PMGP L D+VG G E FP+R + I +M ++KR
Sbjct: 521 FQKVDKVMEKFGWPMGPAYLLDVVGMDTGKHAGEVMAEGFPDRMKHEGTTAIDVMFDNKR 580
Query: 412 AGETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
G+ KGFY Y+ RK D E K ++ V D +F + +I+ +
Sbjct: 581 YGQKNEKGFYRYELDRKGKQQKVVDEESYKLLKPV-----VQGDKEF---EDDEIIARMM 632
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
P+ E R +GI AD D+ + G+GFPP+R
Sbjct: 633 IPLCLETVRCLEDGIVESPADADMGLIYGIGFPPFR 668
>gi|410639006|ref|ZP_11349559.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola lipolytica E3]
gi|410141534|dbj|GAC16764.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola lipolytica E3]
Length = 719
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 264/518 (50%), Gaps = 23/518 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL-- 59
M T + K +A + G +D+VVAP L+ A+ +D + + W A +T K PL
Sbjct: 167 MTTGRDRKAAKAMAEGAIDSVVAPEHLIEAAKSMLVDAIAGKFDWKA--RRTLKQAPLTL 224
Query: 60 GEAREIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
G+ + F+ A+A A H P + +D V L+ E E F L +S+
Sbjct: 225 GKNEAMMSFSTAKAMVAAQAGKHYPAPHMMVDTVTKAAGLDRDGALKLENEGFTTLAKSD 284
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
K+ V IF A + K G A + +K+ A+LG G+MG GIA + PV++K
Sbjct: 285 EAKAQVGIFLADQ-LVKSKGKKQAKAANKEIKQTAVLGAGIMGGGIAYQSAVKGTPVVMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ + L+ G+ L +++GK+ K T++ + LDY + K+ D+VIEA++E
Sbjct: 344 DIAQPALDLGLSEAAKILGKGMQRGKVDAAKMAATLNNIVPTLDYSAIKNADLVIEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + + E+ I+ SNTSTI +N + E +R G HFF+P H MPL+E
Sbjct: 404 NPKVKGIVLKETEQVVADDAIICSNTSTISINQLAENMEKPERFCGMHFFNPVHKMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
I+R +TS + I ++ K+ KTPIVV +C GF VNR+ FPY LV G D
Sbjct: 464 IIRGEKTSEETINTVVAATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLVLDGADFVA 523
Query: 357 IDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI--MQEDKRAG 413
+D+ + K FG PMGP L D+VG A + PER K P+ + + +R G
Sbjct: 524 VDKVMEKIFGWPMGPAYLLDVVGMDTADHASSVMSDGIPERMQKIGDDPVTCLYKAERLG 583
Query: 414 ETTRKGFYLY--DERRKAS--PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+ KGFY + D+R + S P PE + ++ V D K + + +I+ + P
Sbjct: 584 QKNGKGFYNFGVDKRGRPSKTPAPEAYELLKP------VCADEK--EFDKDEIIARLMVP 635
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
+ NE R EGI AA+ D+A + G+GFPP+R F
Sbjct: 636 MANEMIRCLEEGIVGSAAEADMALLYGLGFPPFRGGVF 673
>gi|418295586|ref|ZP_12907438.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379066921|gb|EHY79664.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 715
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 162/509 (31%), Positives = 255/509 (50%), Gaps = 19/509 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A + VDAVVAP +L V A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVHAVDAVVAPEKLQAAALDLVKRAISGELDYKAKRQPKLDKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ ++ EA F KL ++
Sbjct: 229 EQMMAFETSKAFVAGQA---GPNYPAPVEAIKTIQKAANFTRDKAIEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SLV +F + + K D R VK A+LG G+MG GIA + P+++K
Sbjct: 286 VAQSLVGLFLSDQELKKKAKAYDK--QARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T +K + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLDEASKLLGKRVEKGRLTADKMAQALNAIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + A++E + I+ASNTSTI +N + + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKHAVLAEVEGHVREDAIIASNTSTISINYLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS I + KK+ K+P+VV +C GF VNR+ FPY + G D
Sbjct: 464 VIRGEKTSEVAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGE 414
D+ + KFG PMGP L D+VG E FP+R + +M E R G+
Sbjct: 524 ADKVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY Y+ +K P KK ++ I + +LS++DI+ + P+ E
Sbjct: 584 KNGKGFYAYEMDKKGKP----KKVVDAQAYELLKPIVAETRELSDEDIINYMMIPLCLET 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AA+ D+ + G+GFPP+R
Sbjct: 640 VRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|452746073|ref|ZP_21945901.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri NF13]
gi|452010028|gb|EME02233.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas stutzeri NF13]
Length = 715
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 255/509 (50%), Gaps = 19/509 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A + VDAVV P +L V A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVHAVDAVVVPEKLQAAALDLVKRAISGELDYKAKRQPKLDKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETSKAFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SLV +F + + K D R VK A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLVGLFLSDQELKKKAKAYDK--QARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T +K + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLDEASKLLGKRVEKGRLTADKMAQALNAIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + A++E + I+ASNTSTI ++ + + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKHAVLAEVEGHVREDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS I + KK+ K+P+VV +C GF VNR+ FPY + G D
Sbjct: 464 VIRGEKTSETAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGE 414
D+ + KFG PMGP L D+VG E FP+R + +M E R G+
Sbjct: 524 ADKVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY Y+ +K P KK ++ + + +LS++DI+ + P+ E
Sbjct: 584 KNGKGFYAYEMDKKGKP----KKVVDAQAYELLKPVVAETRELSDEDIINYMMIPLCLET 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AA+ D+ + G+GFPP+R
Sbjct: 640 VRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>gi|260430008|ref|ZP_05783983.1| peroxisomal bifunctional enzyme [Citreicella sp. SE45]
gi|260418931|gb|EEX12186.1| peroxisomal bifunctional enzyme [Citreicella sp. SE45]
Length = 697
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 225/404 (55%), Gaps = 11/404 (2%)
Query: 102 LQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSG 161
L E FQ+L S+ +L ++FFA+R V G+ D+ A RRV ++GGG MG G
Sbjct: 255 LADERAVFQRLRLSDDAFALRYLFFAERKAGSVDGL-DM-TAARRVSAAGVIGGGTMGQG 312
Query: 162 IATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDY 221
I AL+ + V+L E +E L + + A+L+++V +G+++ E+ + L+G +DY
Sbjct: 313 IVRALLAAGLSVVLIERDEAALPTALSAIDASLRAQVARGRLSASGAEQRRAALSGAVDY 372
Query: 222 ESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIV 281
+ D+VIEA+ E++S+KQ + A LE P I+A+NTS +D++ + + +R++
Sbjct: 373 GALSGCDLVIEAVFEDMSVKQDVLARLEAALPAEAIIATNTSYLDIDEMVQGLSHPERVL 432
Query: 282 GAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYT 341
G HFFSPA VM LLE+VR +TS V+ L + K+ K P+V GF NR++ Y
Sbjct: 433 GLHFFSPADVMKLLEVVRAARTSDAVLASGLKLAGKLGKQPVVARVGEGFVGNRIYAAYR 492
Query: 342 QAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIAT-GMQFIENFPERTYKS 400
+ A LLV G +D A T FG MGPF ++D+ G +A A Q P+ Y
Sbjct: 493 RRAELLVLDGAAPEEVDTAATGFGFAMGPFAVSDMSGLDIAWAMRKRQAASRDPQARY-- 550
Query: 401 MIIPI-MQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSE 459
+ IP + E R G T KG+Y Y A PDPEV I+ AR+ +GV+ P+
Sbjct: 551 VTIPDRLCEAGRLGRKTGKGWYAYGS-GAAEPDPEVAALIDAARAEAGVS--PQ--SFDA 605
Query: 460 KDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
I + +VNEA + EGIA +A+D+D+A G GFP +R
Sbjct: 606 GTIQRQLLAAIVNEAACLLDEGIAQRASDVDVALANGYGFPRWR 649
>gi|417566545|ref|ZP_12217417.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC143]
gi|395552217|gb|EJG18225.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC143]
Length = 717
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 256/509 (50%), Gaps = 13/509 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M + P K A G VDAVVA ++L+ A + R W A + + L
Sbjct: 168 MAMATPKKPAAALKDGAVDAVVAADKLLDAATDLVKQAISGRLNWKAKRQEKLEAVKLNP 227
Query: 62 AREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ F A+ A+ P + +D ++AG L+ EAE F K +
Sbjct: 228 LEQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAVTPQ 287
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ +F + K + G P V + A+LG G+MG GIA P+I+K+
Sbjct: 288 AEALIGLFINDQVVKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKD 345
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L G+ L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN
Sbjct: 346 IGNPQLALGMKEANNLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTEN 405
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K+ + A+ EK + I+ASNTSTI + + + + VG HFF+P H+MPL+E+
Sbjct: 406 PKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEV 465
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D I
Sbjct: 466 IRGEKTSEETIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQI 525
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGE 414
D ++KFG PMGP L D+VG + E FP+R YK I M E KR G+
Sbjct: 526 DNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGA-IEAMYEAKRLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY Y+ +K + K A + + + + ++I++ + + NE
Sbjct: 585 KNDVGFYKYELDKKGK---KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLALCNET 641
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R + I A++ D+A +MG+GFPP+R
Sbjct: 642 VRCLEDNIVATASEADMAMIMGIGFPPFR 670
>gi|260769022|ref|ZP_05877956.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
furnissii CIP 102972]
gi|260617052|gb|EEX42237.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
furnissii CIP 102972]
Length = 708
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 155/505 (30%), Positives = 263/505 (52%), Gaps = 17/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++LT K ++ ++A LG+VDA V L+ A+++ +D ++ V K + G
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVPHTVLLDVAKRF-IDENGKKKGKVKLTTKEKLMSQTG 226
Query: 61 EAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R++ ++ +Q +P ++V++ G+ G AGL+ EA+ F +L+ +
Sbjct: 227 FGRKVIFDQASKKTEQKTRGNYPAAKAILEVIQHGLEKGMNAGLELEAKRFGELVMTPES 286
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
K+L IFFA K G TD P V ++ +LGGGLMG+GI+ ++ + PV +K+
Sbjct: 287 KALRSIFFATTEMKKENG-TDA--TPLTVNRIGVLGGGLMGAGISHVSVAKAKVPVRIKD 343
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
V+ + + + K+ +++ + + +S L+G +D+ SF D+VIEA+ E+
Sbjct: 344 VSNDGILNALNYNYKLFDKQRKRRILSKAQLQAQMSQLSGGIDFTSFNHTDVVIEAVFED 403
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQ + AD+E I A+NTS++ ++ I + + IVG H+FSP MPL+E+
Sbjct: 404 LALKQSMVADIEANAKASTIFATNTSSLPIHHIAAKAARPENIVGLHYFSPVEKMPLVEV 463
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ + TS + I ++ + +K KTPIVV +C GF VNR+ PY + ++ G + +
Sbjct: 464 IPHDTTSDETISTVVALARKQGKTPIVVKDCAGFYVNRILAPYMNESAQILMAGEPIENL 523
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+ FG P+GP L D VG + + R + + D R G +
Sbjct: 524 DRALLDFGFPVGPITLLDEVGVDIGAKIMPILVNELGPRFQGPDVFDTLLNDGRKGRKSG 583
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
KGFY Y +K D V K ++ + P+ +K S++DI P++NEA R
Sbjct: 584 KGFYSYKGSKKKEVDKSVYKLLK---------LTPE-SKFSDQDIALRCILPMLNEAVRC 633
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EGI D DI ++ G+GFPP+
Sbjct: 634 LDEGIIRSPRDGDIGAIFGIGFPPF 658
>gi|127513353|ref|YP_001094550.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella loihica PV-4]
gi|171855247|sp|A3QFP3.1|FADJ_SHELP RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|126638648|gb|ABO24291.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Shewanella loihica PV-4]
Length = 706
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 274/536 (51%), Gaps = 25/536 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWAL-DILEHRRPWVATLYKTDKIEPL 59
MMLT K ++ ++A +GLVD VV + L+ TA + AL ++P ++T+ K + P+
Sbjct: 165 MMLTGKQLRAKQALKMGLVDDVVPESILLQTAIEMALAGARPAKKPKLSTVEKLLEGTPV 224
Query: 60 GEAREIFKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
G IF+ A Q K+ N P ID V GV G GL+ EA+ F L+ S
Sbjct: 225 GR-NIIFEQALKQVNKKTQGNYPAPEKIIDCVRQGVTKGIVKGLEVEAQHFGDLVVSNES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G D+ +P+ V KV +LGGGLMG GIA+ + PV +K+
Sbjct: 284 EALRSIFFATTEMKKESGAGDV--SPKAVNKVMVLGGGLMGGGIASVTTTKAKIPVRVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++E L + L VK+ MT + ++L+T +Y+ KD DMV+EA+ E+
Sbjct: 342 ISEIGLSNALAYAYKLLAKGVKRRHMTPAVRDNLMALMTTTTEYKGIKDADMVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ + I E + ++G H+FSP MPL+E+
Sbjct: 402 LNLKHQMVKDVERECGEHTIFASNTSSLPIKQIAEAAERPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ ++TSPQ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHDKTSPQTIATTVAFARKQGKTPIVVKDGAGFYVNRILALYMNEAANLLLEGQSVDHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLADDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-----AIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y + K KK +++ S+ GV D + L+E+ +V+M+ N
Sbjct: 582 KGFYQYGAKSK-------KKLVDE--SVYGVLGLTPGADGEPIALAERCVVQML-----N 627
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCYFDQ 528
EA R EGI D DI ++ G+GFPP+ F + + + L Y DQ
Sbjct: 628 EAVRCLEEGIIASPRDGDIGAIFGIGFPPFLGGPFRYMDSLGAKHLVETLKRYQDQ 683
>gi|109897985|ref|YP_661240.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudoalteromonas atlantica T6c]
gi|109700266|gb|ABG40186.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
Length = 717
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 264/505 (52%), Gaps = 15/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPW-VATLYKTDKIEPL 59
MMLT V+ ++A G+VD +V + L+ A + A +R+P + + + + P+
Sbjct: 175 MMLTGASVRAKQAKKYGIVDDMVPRSILLEVAIEMAKKPKPNRKPVKLDAMGQFLERTPM 234
Query: 60 GEAREIFKFARAQAR-KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
G + +FK AR Q + K N P ID +E G+ G G EA+ F L+ +
Sbjct: 235 GR-KLMFKQARKQTQAKTMGNYPSPERIIDCIETGLEKGKAQGFAVEAKHFGHLVMTSES 293
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
+L +FFA K GV G+AP+ +KK+ +LGGGLMG GIA + P +K+
Sbjct: 294 AALRSLFFATTEMKKENGVE--GVAPKTLKKIGVLGGGLMGGGIAFVTATKAKLPARIKD 351
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + + L +VK+ M + + +S LTG +DY F + D+VIEA+ E+
Sbjct: 352 IRSDGIAHAMKYSYDILNKKVKRKFMLHSEMQSQLSRLTGSVDYVGFDNTDVVIEAVFED 411
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQ + AD+E++C H I ASNTS+I + I + + ++G H+FSP MPL E+
Sbjct: 412 LALKQNMVADVEEHCSEHTIFASNTSSIPIGQIAAKAKRPENVIGLHYFSPVDKMPLAEV 471
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS Q I +++ KK KTPIVV + GF VNR+ PY + ++ G + I
Sbjct: 472 IAHEATSDQTISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLAGEPIEQI 531
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP +L D VG V G + F ER + + D R G+ +
Sbjct: 532 DKALVKFGFPVGPIKLLDEVGIDVGTKIGPILVAEFGERFQSAPGFDKLLADDRKGKKNK 591
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
+GFY Y+ ++ P EV E + G+ + ++LSE I E ++NEA
Sbjct: 592 RGFYNYEGKK---PGKEVD---ESVYDLLGITPN---SRLSEHTIAERCVLLMLNEAAIC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EG+ D DI ++ G+GFPP+
Sbjct: 643 LDEGVVRNPRDGDIGAIFGIGFPPF 667
>gi|383189174|ref|YP_005199302.1| fatty oxidation complex, alpha subunit FadJ [Rahnella aquatilis CIP
78.65 = ATCC 33071]
gi|371587432|gb|AEX51162.1| fatty oxidation complex, alpha subunit FadJ [Rahnella aquatilis CIP
78.65 = ATCC 33071]
Length = 734
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 259/511 (50%), Gaps = 25/511 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHR--RPWVATLYKTDKIEP 58
+MLT + ++ ++A +GLVD V + L+ TA + + R PW A L P
Sbjct: 182 LMLTGRSIRAKQALRMGLVDDAVPYSVLLQTALERVAKGRKSRPPLPWQARLAGG----P 237
Query: 59 LGEAREIFKFARAQAR-KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
LG++ +F F R QAR K N IDVV G+ G G Q EA F +L+ +
Sbjct: 238 LGKS-VLFHFVRKQARAKTHGNYPATEKIIDVVRTGLDQGSGNGYQAEANAFGELVMTPE 296
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L +FFA K G L RRV + G + + I + PV +K+
Sbjct: 297 SAALRSLFFASTALKKEKGGDAEPLPVRRVGILGGGLMGGGIAHVTA--IKAGLPVRIKD 354
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N + + + L+ +V+ ++T+ + ++ + L++G DY F D+V+EA+ E+
Sbjct: 355 INHEGIRHALKYSWDLLEKKVRSRRLTRTEQQRQMMLISGTTDYSGFAQTDIVVEAVFED 414
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+SLKQ + A++E+ H I ASNTS++ ++ I E+ ++++G H+FSP MPL+E+
Sbjct: 415 LSLKQSMVAEIEQNAALHTIFASNTSSLPIHKIAEQASRPEQVIGLHYFSPVDKMPLVEV 474
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS Q I + + KK KT IVVG+ GF VNR+ PY A + G + I
Sbjct: 475 IPHAGTSAQTISTTVSLAKKQGKTAIVVGDRAGFYVNRILAPYINEAARCLINGEPVDHI 534
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ FG P+GP +L D VG V G ++ F ER + +D R G
Sbjct: 535 DKALVNFGFPVGPIQLLDEVGIDVGTKIGPILVDAFGERFAAPSGFDAVLKDDRKGRKNG 594
Query: 418 KGFYLYDERRKASP-----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y ++ +A+ DP + + + + PK A+ SE +I + ++N
Sbjct: 595 KGFYFYGQKGRAAAKKKQVDPAIYRLLN---------VTPK-AQQSEDEIAQRCVMLMLN 644
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
EA R E + A D D+ +V G+GFPP+R
Sbjct: 645 EAVRCLDENVIRSARDGDLGAVFGIGFPPFR 675
>gi|390165886|ref|ZP_10218160.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum
B90A]
gi|389591183|gb|EIM69157.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum
B90A]
Length = 689
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 268/505 (53%), Gaps = 19/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + + +K EA SLGLVDAVV L A +A ++ + D ++
Sbjct: 152 IITSGRQIKAAEALSLGLVDAVVDDAALAEEALAFARRVVADGGAKPRIRDRADALQADR 211
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ ++F A ++ P I+ VEA V GL KE F++L+ S +
Sbjct: 212 DRPDLFTAFAAAHARRFKGFVAPAAIIEAVEAAVTLPFEEGLAKETALFERLVASPESAA 271
Query: 121 LVHIFFAQRGTSKVPGVTDLG--LAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
H+FFA+R ++VP D+G ++ ++ V ++G G MG GI + + PV L E
Sbjct: 272 QRHVFFAEREAARVP---DIGPDISAIDIRSVGVIGAGTMGGGITMNFLNAGIPVTLVET 328
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+++ L+ GI +R N ++ KG+MT + E+ ++L++ LD + D D++IEA+ E++
Sbjct: 329 SQEALDRGIATIRRNYEATAAKGRMTGAQVEQRMALISPSLDLAALADADLIIEAVYESM 388
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K IFA L++ ILASNTS +DLN I T + +VG HFFSPA+VM LLE+V
Sbjct: 389 DVKTDIFARLDRIAKAGTILASNTSFLDLNRIAAATSRPEWVVGLHFFSPANVMRLLEVV 448
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R TS V+ + + K+I K ++ G C GF NR+ P A ++ GT + ID
Sbjct: 449 RGAATSKPVVATAMRLAKRIGKVAVLSGVCDGFIANRLLAPRGAQAEAMMLEGTPIAEID 508
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
R + +G MG F++ DLVG V N ERT ++ R G+
Sbjct: 509 RVLVDYGFAMGHFQMMDLVGLDV-------IGRNATERTVMGDLVTA----GRLGQKGGA 557
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
G+Y YDE+R++ P I++ + GVA P ++ ++ + +PVVNE ++
Sbjct: 558 GYYDYDEKRRSRPSDVTDSLIKEVAAARGVAHAPTS---GDEALLARLLYPVVNEGAKIL 614
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
EGIA++A+D+DIA+V+G +P YR
Sbjct: 615 EEGIALRASDIDIAAVLGYNWPVYR 639
>gi|108760112|ref|YP_633521.1| multifunctional fatty acid oxidation complex subunit alpha
[Myxococcus xanthus DK 1622]
gi|108463992|gb|ABF89177.1| fatty oxidation complex, alpha subunit FadJ [Myxococcus xanthus DK
1622]
Length = 746
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 168/478 (35%), Positives = 249/478 (52%), Gaps = 22/478 (4%)
Query: 58 PLGEAREIFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
PLG + +F AR Q +K P + VV G+ SG +AG + EA+ F +L+ S+
Sbjct: 260 PLGR-KVLFDQARKQLLKKTRGKFPAPEKALQVVRVGLESGHKAGQEAEAKAFGELVVSD 318
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVIL 175
K LV IFFA K G ++ PR VKKVA+LGGGLMG GIA +L PV +
Sbjct: 319 VSKRLVEIFFATTALKKENGTSNPDAKPREVKKVAVLGGGLMGGGIAYVTSVLQGVPVRV 378
Query: 176 KEVNEKFLEAGIGRVRANLQS----RVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVI 231
K+ ++ AG+GR +QS RVK+ +T+ + +L+T DY FK D+VI
Sbjct: 379 KDKDD----AGVGRAMKQVQSILDERVKRRSLTRREATAKSALVTAGTDYSGFKSADLVI 434
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHV 291
EA+ E++ LK +I A++E I ASNTS+I + + + + +++G H+FSP H
Sbjct: 435 EAVFEDLKLKHRIIAEVEAVTGDQTIFASNTSSIPITELAKGSRRPAQVIGMHYFSPVHK 494
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPY-TQAAFLLVER 350
MPLLEI+ T+ V +++G+K KT IVV + GF +R+ PY +AA+LL E
Sbjct: 495 MPLLEIITHAGTADWVTATCVEVGRKQGKTVIVVNDGPGFYTSRILAPYMNEAAYLLAE- 553
Query: 351 GTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDK 410
G D+ +DRA+ +FG P+GP L D VG VA G F +R + + D
Sbjct: 554 GADIAELDRALVEFGFPVGPITLLDEVGIDVAQKVGPIMEAAFGKRMAAPKALEKVVADG 613
Query: 411 RAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
R G T+KGFYLY++ +K D + + ++ E + +
Sbjct: 614 RLGRKTQKGFYLYEDGKKQEVDSSIYALLPHGTERR---------SFDRAEMAERVVLQM 664
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCYFDQ 528
VNEA R EGI A D D+ ++ G+GFPP+ F + + + L Y D+
Sbjct: 665 VNEAIRCLGEGILRSARDGDVGAIFGLGFPPFLGGPFHYVDSRGPAEVLRKLEHYHDK 722
>gi|402701457|ref|ZP_10849436.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas fragi A22]
Length = 715
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 256/509 (50%), Gaps = 19/509 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A +G VDAVV ++L + A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVGAVDAVVTLDKLGAAALDVIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+ L+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 ASQCLIGLFLNDQELKKKAKAYDK--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSDLAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I + E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY Y+E ++ KK ++ + I + ++++DI+ + P+ E
Sbjct: 584 KNGKGFYAYEEDKRGKQ----KKVVDSSVLEVLKPIVYEQRDVTDEDIINWMMIPLCLET 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AA+ D+ V G+GFP +R
Sbjct: 640 VRCLEDGIVETAAEADMGLVYGIGFPLFR 668
>gi|184156642|ref|YP_001844981.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii ACICU]
gi|239500960|ref|ZP_04660270.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii AB900]
gi|260556327|ref|ZP_05828546.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|332873049|ref|ZP_08441006.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii 6014059]
gi|384141595|ref|YP_005524305.1| 3-hydroxyacyl-CoA dehydrogenase [Acinetobacter baumannii MDR-ZJ06]
gi|387125445|ref|YP_006291327.1| fatty acid oxidation complex subunit FadB [Acinetobacter baumannii
MDR-TJ]
gi|407931247|ref|YP_006846890.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii TYTH-1]
gi|417548592|ref|ZP_12199673.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-18]
gi|417570525|ref|ZP_12221382.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC189]
gi|417577443|ref|ZP_12228288.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-17]
gi|417870956|ref|ZP_12515900.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii ABNIH1]
gi|417875613|ref|ZP_12520418.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii ABNIH2]
gi|417879892|ref|ZP_12524443.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii ABNIH3]
gi|417881950|ref|ZP_12526258.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii ABNIH4]
gi|421203428|ref|ZP_15660567.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii AC12]
gi|421534995|ref|ZP_15981262.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii AC30]
gi|421627261|ref|ZP_16068072.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC098]
gi|421630818|ref|ZP_16071519.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC180]
gi|421677553|ref|ZP_16117445.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC111]
gi|421688370|ref|ZP_16128070.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii IS-143]
gi|421702044|ref|ZP_16141529.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii ZWS1122]
gi|421705783|ref|ZP_16145204.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii ZWS1219]
gi|421792231|ref|ZP_16228386.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-2]
gi|424053932|ref|ZP_17791463.1| fatty acid oxidation complex subunit alpha [Acinetobacter baumannii
Ab11111]
gi|424064868|ref|ZP_17802352.1| fatty acid oxidation complex subunit alpha [Acinetobacter baumannii
Ab44444]
gi|425751424|ref|ZP_18869369.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-113]
gi|445447022|ref|ZP_21443584.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-A-92]
gi|445458116|ref|ZP_21446940.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC047]
gi|445465057|ref|ZP_21449835.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC338]
gi|445481706|ref|ZP_21456150.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-78]
gi|254788553|sp|B2I2J9.1|FADB_ACIBC RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|183208236|gb|ACC55634.1| 3-hydroxyacyl-CoA dehydrogenase [Acinetobacter baumannii ACICU]
gi|260410382|gb|EEX03681.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|332738561|gb|EGJ69431.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii 6014059]
gi|342224966|gb|EGT89976.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii ABNIH2]
gi|342226272|gb|EGT91245.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii ABNIH1]
gi|342227226|gb|EGT92165.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii ABNIH3]
gi|342238199|gb|EGU02632.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii ABNIH4]
gi|347592088|gb|AEP04809.1| 3-hydroxyacyl-CoA dehydrogenase [Acinetobacter baumannii MDR-ZJ06]
gi|385879937|gb|AFI97032.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii MDR-TJ]
gi|395550973|gb|EJG16982.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC189]
gi|395570664|gb|EJG31326.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-17]
gi|398327081|gb|EJN43220.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii AC12]
gi|400388891|gb|EJP51963.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-18]
gi|404561113|gb|EKA66349.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii IS-143]
gi|404667418|gb|EKB35339.1| fatty acid oxidation complex subunit alpha [Acinetobacter baumannii
Ab11111]
gi|404672951|gb|EKB40755.1| fatty acid oxidation complex subunit alpha [Acinetobacter baumannii
Ab44444]
gi|407194807|gb|EKE65943.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii ZWS1122]
gi|407195196|gb|EKE66330.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii ZWS1219]
gi|407899828|gb|AFU36659.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii TYTH-1]
gi|408693352|gb|EKL38961.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC098]
gi|408697204|gb|EKL42724.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC180]
gi|409987143|gb|EKO43329.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii AC30]
gi|410393309|gb|EKP45663.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC111]
gi|410400538|gb|EKP52706.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-2]
gi|425499871|gb|EKU65899.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-113]
gi|444759449|gb|ELW83917.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-A-92]
gi|444770498|gb|ELW94655.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-78]
gi|444775760|gb|ELW99816.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC047]
gi|444779189|gb|ELX03183.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC338]
gi|452955583|gb|EME60980.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii MSP4-16]
Length = 717
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 256/509 (50%), Gaps = 13/509 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M + P K A G VDAVVA ++L+ A + R W A + + L
Sbjct: 168 MAMATPKKPAAALKDGAVDAVVAADKLLDAATDLVKQAISGRLNWKAKRQEKLEAVKLNP 227
Query: 62 AREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ F A+ A+ P + +D ++AG L+ EAE F K +
Sbjct: 228 LEQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAVTPQ 287
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ +F + K + G P V + A+LG G+MG GIA P+I+K+
Sbjct: 288 AEALIGLFINDQVVKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKD 345
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L G+ L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN
Sbjct: 346 IGNPQLALGMKEANNLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTEN 405
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K+ + A+ EK + I+ASNTSTI + + + + VG HFF+P H+MPL+E+
Sbjct: 406 PKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEV 465
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D I
Sbjct: 466 IRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQI 525
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGE 414
D ++KFG PMGP L D+VG + E FP+R YK I M E KR G+
Sbjct: 526 DNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGA-IEAMYEAKRLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY Y+ +K + K A + + + + ++I++ + + NE
Sbjct: 585 KNDVGFYKYELDKKGK---KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLALCNET 641
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R + I A++ D+A +MG+GFPP+R
Sbjct: 642 VRCLEDNIVATASEADMAMIMGIGFPPFR 670
>gi|417544680|ref|ZP_12195766.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC032]
gi|421666432|ref|ZP_16106524.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC087]
gi|421670998|ref|ZP_16110980.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC099]
gi|421675875|ref|ZP_16115794.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC065]
gi|421692497|ref|ZP_16132148.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii IS-116]
gi|424061374|ref|ZP_17798864.1| fatty acid oxidation complex subunit alpha [Acinetobacter baumannii
Ab33333]
gi|445492969|ref|ZP_21460727.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii AA-014]
gi|400382568|gb|EJP41246.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC032]
gi|404559783|gb|EKA65034.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii IS-116]
gi|404667056|gb|EKB34986.1| fatty acid oxidation complex subunit alpha [Acinetobacter baumannii
Ab33333]
gi|410381392|gb|EKP33958.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC065]
gi|410383295|gb|EKP35828.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC099]
gi|410388357|gb|EKP40796.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC087]
gi|444762753|gb|ELW87106.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii AA-014]
Length = 717
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 256/509 (50%), Gaps = 13/509 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M + P K A G VDAVVA ++L+ A + R W A + + L
Sbjct: 168 MAMATPKKPAAALKDGAVDAVVAADKLLDAATDLVKQAISGRLNWKAKRQEKLEAVKLNP 227
Query: 62 AREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ F A+ A+ P + +D ++AG L+ EAE F K +
Sbjct: 228 LEQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAVTPQ 287
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ +F + K + G P V + A+LG G+MG GIA P+I+K+
Sbjct: 288 AEALIGLFINDQVVKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKD 345
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L G+ L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN
Sbjct: 346 IGNPQLALGMKEANNLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTEN 405
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K+ + A+ EK + I+ASNTSTI + + + + VG HFF+P H+MPL+E+
Sbjct: 406 PKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEV 465
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D I
Sbjct: 466 IRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQI 525
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERT---YKSMIIPIMQEDKRAGE 414
D ++KFG PMGP L D+VG + E FP+R YK I M E KR G+
Sbjct: 526 DNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPEYKGA-IEAMYEAKRLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY Y+ +K + K A + + + + ++I++ + + NE
Sbjct: 585 KNDVGFYKYELDKKGK---KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLALCNET 641
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R + I A++ D+A +MG+GFPP+R
Sbjct: 642 VRCLEDNIVATASEADMAMIMGIGFPPFR 670
>gi|401764607|ref|YP_006579614.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400176141|gb|AFP70990.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 715
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 167/508 (32%), Positives = 257/508 (50%), Gaps = 22/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LT K ++ +A GLVD VV L+ A + AL + +RP + + PLG
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPHAILLEAAVELALKGRQPKRPL--PVRERVLAGPLG 224
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ +K N ++V+E G+ G +G EA+ F +L + ++
Sbjct: 225 RTILFNMVGKKTEQKTKGNYPAAKRILEVIETGLSQGSSSGYAAEAKAFGELAMTPQSRA 284
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L IFFA K PG ++ AP R V G G TA PV +K++N
Sbjct: 285 LRSIFFASTEVKKDPG-SEAEPAPLRAIGVLGGGLMGGGISFVTA-SKGKLPVRIKDINP 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
K + + NL +VK+ + + +KT+++++G DY F D+VIEA+ E+++L
Sbjct: 343 KGINHALQYSWQNLDQKVKRRHIKASERDKTLAMISGTTDYSGFAHRDLVIEAVFEDLAL 402
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQ+ AD+E++C H I ASNTS++ + I + ++++G HFFSP MPL+E++
Sbjct: 403 KQQMVADVEQHCASHTIFASNTSSLPIGDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPH 462
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TSPQ I ++ + KK KTPIVV + GF VNR+ PY A L+ G + +D A
Sbjct: 463 ATTSPQTIATVVKLAKKQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEA 522
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY------KSMIIPIMQEDKRAGE 414
+ KFG P+GP +L D VG I TG + I E Y + I+ + +D R G
Sbjct: 523 LVKFGFPVGPIQLLDEVG----IDTGTKIIPVL-EAAYGDRFAPPANIVSAILKDDRKGR 577
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
+GFYLY + + S KK ++ S+ G+ +LS E ++NEA
Sbjct: 578 KNERGFYLYGAKGRKS-----KKQVDP--SVYGLIPTSGQGRLSAVQCAERCVMMMLNEA 630
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPY 502
R F E + A + DI +V G+GFPP+
Sbjct: 631 ARCFGEQVIKSARNGDIGAVFGIGFPPF 658
>gi|262280731|ref|ZP_06058514.1| 3-hydroxyacyl-CoA dehydrogenase [Acinetobacter calcoaceticus
RUH2202]
gi|262257631|gb|EEY76366.1| 3-hydroxyacyl-CoA dehydrogenase [Acinetobacter calcoaceticus
RUH2202]
Length = 717
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 253/495 (51%), Gaps = 15/495 (3%)
Query: 17 GLVDAVVAPNQLVSTARQWALDILEHRRPWVATLY-KTD--KIEPLGEAREIFKFARAQ- 72
G VDAVVA ++L+ A + R W A K D K+ PL E F A+
Sbjct: 183 GAVDAVVAADKLLDAATDLVKQAISGRLDWKAKRQEKLDAVKLNPL-EQMMAFNTAKGAV 241
Query: 73 -ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGT 131
A+ P + +D ++AG L+ EAE F K + +L+ +F +
Sbjct: 242 LAKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAITPQAGALIGLFLNDQVV 301
Query: 132 SKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVR 191
K + G P V + A+LG G+MG GIA P+I+K++ L G+
Sbjct: 302 KKTAKKHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKDIGNPQLALGMSEAN 359
Query: 192 ANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKY 251
+ L +V++ KM + +T++ + L Y+ FK+VD+VIEA+ EN +K+ + AD EK+
Sbjct: 360 SLLTKQVERKKMKPAQMGETLARIRPTLSYDEFKEVDIVIEAVTENPKVKEIVLADTEKH 419
Query: 252 CPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDL 311
+ I+ASNTSTI + + + + VG HFF+P H+MPL+E++R +TS + I
Sbjct: 420 VRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIATT 479
Query: 312 LDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPF 371
+ + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D +D ++KFG PMGP
Sbjct: 480 VVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQVDNVMSKFGWPMGPA 539
Query: 372 RLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETTRKGFYLYDERRK 428
L D+VG + E FP+R YK I M E KR G+ GFY Y+ +K
Sbjct: 540 YLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IQAMYEAKRLGQKNDVGFYKYELDKK 598
Query: 429 ASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAAD 488
+ K A + + + + ++I++ + NE R + I AA+
Sbjct: 599 GK---KAKTVDPTAYEIIAPFVTGEKREFDNQEIIDRMMLAFCNETVRCLEDNIVATAAE 655
Query: 489 LDIASVMGMGFPPYR 503
D+A +MG+GFPP+R
Sbjct: 656 ADMAMIMGVGFPPFR 670
>gi|414071550|ref|ZP_11407516.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Pseudoalteromonas sp.
Bsw20308]
gi|410805990|gb|EKS11990.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Pseudoalteromonas sp.
Bsw20308]
Length = 748
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 170/527 (32%), Positives = 267/527 (50%), Gaps = 22/527 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDIL-EHRRPWVATLYKTDKIEPLG 60
MLT K ++ ++A G++D V + L+ A+++A + + P + + K + P G
Sbjct: 166 MLTGKQIRPKQAKKAGVLDDCVPHSVLLKVAKEFATKKKPQAKEPKLDNISKLLESNPFG 225
Query: 61 EAREIFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
IFK A+ +K + P+ I V A V + EAE F L+ S+ K
Sbjct: 226 R-NFIFKKAKENVLKKTGGHYPAPLAIIKAVRASVELDELKAYKTEAESFATLVMSDESK 284
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKEV 178
+L IFFA K D AP + K A+LGGGLMG+GIA + + + PV +K+V
Sbjct: 285 ALRGIFFATTEMKKEWRNDD---APA-ISKTAVLGGGLMGAGIAHVSAVKAKVPVRIKDV 340
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
E+ + + L R+K+ +++ + T++ +TG DY FK +D+VIEA+ E++
Sbjct: 341 AEQGISNAMSYTYKILDKRLKRRIISKADVQLTMNRITGTTDYSGFKHIDLVIEAVFEDL 400
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+LKQ + AD+E+ C + I ASNTS++ ++ I + + ++G H+FSP MPL+EI+
Sbjct: 401 ALKQGMVADVEQQCQANTIFASNTSSLPISQIAAQAARPENVIGLHYFSPVEKMPLVEII 460
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
TS + I +++ +K KTPIVV + GF VNR+ PY A L+ G + ID
Sbjct: 461 PHEGTSQETIARVVNFARKQGKTPIVVKDMAGFYVNRILAPYLNEAANLMLAGEPIEKID 520
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ +FG P+GP L D VG + + ER M + KR G + +
Sbjct: 521 AALVEFGFPVGPLALLDEVGIDIGSKIAPILEKELGERFKGPDAFVRMIDSKRLGRKSGR 580
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY YD++ KK E + GV P +L++ +I + ++NEA R
Sbjct: 581 GFYEYDKKG--------KKVDESVYELLGVTPAP---RLNKSEIAKRCVSQMLNEAVRCL 629
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR---FVTFIHRGFSKSSSCFKNL 522
+GI D DI ++ G+GFPP+ F G SK SS L
Sbjct: 630 DDGIIASPRDGDIGAIFGIGFPPFLGGPFSYMDKLGASKISSDMSTL 676
>gi|384130309|ref|YP_005512921.1| fadB [Acinetobacter baumannii 1656-2]
gi|385235909|ref|YP_005797248.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii TCDC-AB0715]
gi|416147217|ref|ZP_11601673.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii AB210]
gi|322506529|gb|ADX01983.1| fadB [Acinetobacter baumannii 1656-2]
gi|323516408|gb|ADX90789.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii TCDC-AB0715]
gi|333365788|gb|EGK47802.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii AB210]
Length = 706
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 256/509 (50%), Gaps = 13/509 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M + P K A G VDAVVA ++L+ A + R W A + + L
Sbjct: 157 MAMATPKKPAAALKDGAVDAVVAADKLLDAATDLVKQAISGRLNWKAKRQEKLEAVKLNP 216
Query: 62 AREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ F A+ A+ P + +D ++AG L+ EAE F K +
Sbjct: 217 LEQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAVTPQ 276
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ +F + K + G P V + A+LG G+MG GIA P+I+K+
Sbjct: 277 AEALIGLFINDQVVKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKD 334
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L G+ L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN
Sbjct: 335 IGNPQLALGMKEANNLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTEN 394
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K+ + A+ EK + I+ASNTSTI + + + + VG HFF+P H+MPL+E+
Sbjct: 395 PKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEV 454
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D I
Sbjct: 455 IRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQI 514
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGE 414
D ++KFG PMGP L D+VG + E FP+R YK I M E KR G+
Sbjct: 515 DNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGA-IEAMYEAKRLGQ 573
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY Y+ +K + K A + + + + ++I++ + + NE
Sbjct: 574 KNDVGFYKYELDKKGK---KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLALCNET 630
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R + I A++ D+A +MG+GFPP+R
Sbjct: 631 VRCLEDNIVATASEADMAMIMGIGFPPFR 659
>gi|109896532|ref|YP_659787.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudoalteromonas atlantica T6c]
gi|109698813|gb|ABG38733.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
Length = 719
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 259/513 (50%), Gaps = 13/513 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M T + K +A + G VDAVVAP +L A D ++ + W A + L +
Sbjct: 167 MTTGRDRKAAKALAEGAVDAVVAPEKLRDAALSMLQDAIDGKFGWEARRAQKKAPLKLNK 226
Query: 62 AREIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAG-LQKEAEDFQKLLRSET 117
+ F+ A+A A H P +D V A RAG L+ E + F KL +S+
Sbjct: 227 NESMMSFSTAKAMVFAQAGKHYPAPHAMVDTV-ANAARLDRAGALELENQGFTKLAKSDA 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
K+ V IF A + K G + + VK+ A+LG G+MG GIA + PVI+K+
Sbjct: 286 AKAQVGIFLADQ-LVKSKGKKQAKASTKDVKQTAVLGAGIMGGGIAYQSAVKGTPVIMKD 344
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N+ L+ G+ L +++GK+T T++ + L+Y + KDVD+VIEA++EN
Sbjct: 345 INQDALDLGLNEAAKILGKGMQRGKVTPAVMSNTLNNIVPTLEYSAIKDVDLVIEAVVEN 404
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + + E+ ++ SNTSTI +N + E +R G HFF+P H MPL+EI
Sbjct: 405 PKVKGIVLKETEQNVSDDTVICSNTSTISINQLAESLEKPERFCGMHFFNPVHKMPLVEI 464
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +T+ I ++ K+ KTPIVV +C GF VNR+ FPY LV G D +
Sbjct: 465 IRGEKTTDATIATVVAATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLVMDGADFVAV 524
Query: 358 DRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI--MQEDKRAGE 414
D+ + K FG PMGP L D+VG A + PER K P+ + + +R G+
Sbjct: 525 DKVMEKIFGWPMGPAYLLDVVGMDTADHASSVMADGIPERMQKIDNDPVTLLYKSERLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY + ++ P KK ++A + K +I+ + P+ NEA
Sbjct: 585 KNGKGFYNFSLDKRGRP---AKKAADEAYELFAPHCADK-RDFDADEIIARVMIPMANEA 640
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI AA+ D+A + G+GFPP+R F
Sbjct: 641 IRCLEEGIVGSAAEADMALLYGLGFPPFRGGVF 673
>gi|378769181|ref|YP_005197656.1| fatty oxidation complex alpha subunit [Pantoea ananatis LMG 5342]
gi|386017936|ref|YP_005936237.1| fatty oxidation complex alpha subunit FadB [Pantoea ananatis
AJ13355]
gi|327396019|dbj|BAK13441.1| fatty oxidation complex alpha subunit FadB [Pantoea ananatis
AJ13355]
gi|365188669|emb|CCF11619.1| fatty oxidation complex alpha subunit [Pantoea ananatis LMG 5342]
Length = 727
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 266/531 (50%), Gaps = 49/531 (9%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILE----------HRRPWVATL 50
++ K + G A LGLVDAVV+P++L R AL +L+ R P +A L
Sbjct: 166 IIAAGKDIDGMAALRLGLVDAVVSPDKL----RDAALTMLKAAASDGSWRARRAPKLAPL 221
Query: 51 YKTDKIEPLGEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDF 109
K+ P+ EA F A+ + A + P+ + +EA G L+ E F
Sbjct: 222 ----KLSPV-EAAMSFTIAKGMVMQTAGKHYPAPLTAVKTIEAAAALGRDDALKLETAAF 276
Query: 110 QKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRV------KKVAILGGGLMGSGIA 163
L +S+ ++LV IF + GLA +R K+ A+LG G+MG GI+
Sbjct: 277 VPLAQSDVARALVGIFLNDQYIK--------GLAKKRSSENGAPKQAAVLGAGIMGGGIS 328
Query: 164 TALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYES 223
PV +K+++ + L G+ L ++++GK+ + I+ + LDY
Sbjct: 329 YQSAWKGVPVKMKDIHPQALTLGMNEASKLLNKQLERGKIDGNRLAAVIATIQPTLDYAG 388
Query: 224 FKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGA 283
F D+V+EA++EN +K + A+ EK+ ILASNTSTI ++ + + + G
Sbjct: 389 FDQADVVVEAVVENPQIKASVLAETEKHMRSDAILASNTSTIPISQLAQALQRPENFCGM 448
Query: 284 HFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQA 343
HFF+P MPL+E+VR +TS + ++ K+ KTP+VV +C GF VNR+ FPY A
Sbjct: 449 HFFNPVPRMPLVEVVRGEKTSEATLGKVVAWASKMGKTPVVVNDCPGFFVNRVLFPYFAA 508
Query: 344 AFLLVERGTDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM- 401
+L+ G D ID+ + K FG PMGP L D+VG A + FP+R K
Sbjct: 509 FGMLLRDGADFRQIDKVMEKQFGWPMGPSWLLDVVGIDTAHHAQSVMADGFPQRMKKDYR 568
Query: 402 -IIPIMQEDKRAGETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAK 456
I I+ E KR G+ KGF+ ++E +K P DPEV +E A PK
Sbjct: 569 DAIDILFEAKRFGQKNGKGFWRWEEDKKGKPKKVSDPEVDALLEP-------ACQPKRI- 620
Query: 457 LSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
S+++I+ + P++NE R E I A+ D+A V G+GFPP+R F
Sbjct: 621 FSDEEILNRMMLPMLNEVVRCLEEKIIASPAEADMALVYGLGFPPFRGGAF 671
>gi|340000113|ref|YP_004730996.1| fatty acid oxidation complex alpha subunit [Salmonella bongori NCTC
12419]
gi|339513474|emb|CCC31227.1| putative fatty acid oxidation complex alpha subunit [Salmonella
bongori NCTC 12419]
Length = 715
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 265/514 (51%), Gaps = 34/514 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWAL-DILEHRRPWVATLYKTDKI--E 57
M+LT K ++ +A GLVD VV + L+ A + A + L RR L ++I
Sbjct: 167 MILTGKQLRARQALKTGLVDDVVPQSILLEAAVELAKKERLAQRR-----LPVRERILAG 221
Query: 58 PLGEAREIFKFARAQ-ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
PLG A +F+ R + A+K N IDV+E G+ G +G EA F +L +
Sbjct: 222 PLGRAL-LFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTP 280
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
++L IFFA K PG +D P + G G TA PV +K
Sbjct: 281 QSQALRAIFFASTQVKKDPG-SDAPPGPLHSVGILGGGLMGGGIAWVTA-CKGGLPVRIK 338
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++N K + + L+++V++ + + +K +SL++G DY F D+VIEA+ E
Sbjct: 339 DINAKGINHALKYSWDQLETKVRRRHIKASQRDKQLSLISGSTDYRGFSHRDVVIEAVFE 398
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
+++LKQQ+ A++E++C PH I ASNTS++ ++ I +++G HFFSP MPL+E
Sbjct: 399 DLALKQQMVAEVEQHCAPHTIFASNTSSLPISDIAANAARPQQVIGLHFFSPVEKMPLVE 458
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++ TS Q I + + KK KTPIVV + GF VNR+ PY A ++ G +
Sbjct: 459 VIPHASTSAQTIATTVQLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERIEH 518
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKR 411
ID A+ KFG P+GP +L D VG I TG + I + ER + + ++ + D R
Sbjct: 519 IDTALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSAPANVVASILNDDR 574
Query: 412 AGETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFF 468
G +GFYLY ++ + S DP + K I ++ G ++LS + + E
Sbjct: 575 KGRKNGRGFYLYGKKGRKSKKQVDPAIYKLI----NVQGQ------SRLSAQQVAERCVM 624
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E + A D DI +V G+GFPP+
Sbjct: 625 LMLNEAARCFDERVIRSARDGDIGAVFGIGFPPF 658
>gi|383873077|ref|NP_001244421.1| peroxisomal bifunctional enzyme [Macaca mulatta]
gi|380790201|gb|AFE66976.1| peroxisomal bifunctional enzyme isoform 1 [Macaca mulatta]
Length = 723
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 165/547 (30%), Positives = 267/547 (48%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + EA LG++D VV + + + A+ + LE RR I+
Sbjct: 151 LITSGRHILAGEALKLGILDKVVNSDPVEEAIRFAQTVSDQPLESRR------LCNKPIQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF + +KQ P C+ V+A V G++KE E F L +S
Sbjct: 205 SLPNMDTIFSEVLLKMQKQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLFQSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + FFA+R +K G + + + V V ++G G MG GI + + PVI
Sbjct: 265 ARALQYAFFAERKANKWSTPSGASWKTASAQPVSSVGVVGLGTMGRGIVISFARARIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 325 AVDSDKNQLATANKIITSVLEKEASKMQQSGHPWSGPKPKLTSSM--KELGGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E +SLK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 383 FEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY + L+E G+
Sbjct: 443 LEVIPSRYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG MGPFR++DL G V TG P R + IP
Sbjct: 503 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + KF+ + R I+P+ +S+ +
Sbjct: 563 DMLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRET--YHIEPR--TISQDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA + EGIA +D+ + G G+P ++ + + +
Sbjct: 619 ILERCLYSLINEAFHILGEGIATSPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 679 LQKYYRQ 685
>gi|355746836|gb|EHH51450.1| hypothetical protein EGM_10819 [Macaca fascicularis]
Length = 723
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 164/544 (30%), Positives = 269/544 (49%), Gaps = 25/544 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + + + EA LG++D VV + V A ++A + + +P + I+ L
Sbjct: 151 LITSGRHILAGEALKLGILDKVVNSDP-VEEAIRFAQTVSD--QPLESHRLCNKPIQSLP 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
IF + +KQ P C+ V+A V G++KE E F L +S ++
Sbjct: 208 NMDTIFSEVLLKMQKQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLFQSGQARA 267
Query: 121 LVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L + FFA+R +K G + + + V V ++G G MG GI + + PVI +
Sbjct: 268 LQYAFFAERKANKWSTPSGASWKTASAQPVSSVGVVGLGTMGRGIVISFARARIPVIAVD 327
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ L + + L+ K + + + + LT + + VD+VIEA+ E
Sbjct: 328 SDKNQLATANKIITSVLEKEASKMQQSGQPWSGPKPKLTSSM--KELGGVDLVIEAVFEE 385
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+SLK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM LLE+
Sbjct: 386 MSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEV 445
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ + +SP I ++++ KKIKK +VVGNC GF NRM PY + L+E G+ +
Sbjct: 446 IPSRYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKPEEV 505
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP-IM 406
D+ + +FG MGPFR++DL G V TG P R + IP ++
Sbjct: 506 DQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRYCPIPDML 565
Query: 407 QEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVE 464
E R G+ T KG+Y YD+ R PDP + KF+ + R I+P+ +S+ +I+E
Sbjct: 566 CELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRET--YHIEPR--TISQDEILE 621
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLC 524
+ ++NEA + EGIA +D+ + G G+P ++ + + + L
Sbjct: 622 RCLYSLINEAFHILGEGIATSPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQK 681
Query: 525 YFDQ 528
Y+ Q
Sbjct: 682 YYRQ 685
>gi|355559806|gb|EHH16534.1| hypothetical protein EGK_11823 [Macaca mulatta]
Length = 723
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 165/547 (30%), Positives = 267/547 (48%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPN---QLVSTARQWALDILEHRRPWVATLYKTDKIE 57
++ + + + EA LG++D VV + + + A+ + LE RR I+
Sbjct: 151 LITSGRHILAGEALKLGILDKVVNSDPVEEAIRFAQTVSDQPLESRR------LCNKPIQ 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF + +KQ P C+ V+A V G++KE E F L +S
Sbjct: 205 SLPNMDTIFSEVLLKMQKQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLFQSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++L + FFA+R +K G + + + V V ++G G MG GI + + PVI
Sbjct: 265 ARALQYAFFAERKANKWSTPSGASWKTASAQPVSSVGVVGLGTMGRGIVISFARARIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ ++ L + + L+ K + + + LT + + VD+VIEA+
Sbjct: 325 AVDSDKNQLSTANKIITSVLEKEASKMQQSGHPWSGPKPKLTSSV--KELGGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E +SLK+Q+FA+L C P L +NTS +D++ I T ++G HFFSPAHVM L
Sbjct: 383 FEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM PY + L+E G+
Sbjct: 443 LEVIPSRYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER---TYKSMIIP 404
+D+ + +FG MGPFR++DL G V TG P R + IP
Sbjct: 503 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + KF+ + R I+P+ +S+ +
Sbjct: 563 DMLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRET--YHIEPR--TISQDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA + EGIA +D+ + G G+P ++ + + +
Sbjct: 619 ILERCLYSLINEAFHILGEGIATSPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 679 LQKYYRQ 685
>gi|297624952|ref|YP_003706386.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Truepera
radiovictrix DSM 17093]
gi|297166132|gb|ADI15843.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Truepera
radiovictrix DSM 17093]
Length = 718
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 254/523 (48%), Gaps = 45/523 (8%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-----ALDILEHRRPWVATLYKTDK 55
M LT + V + A +GLVDA+ P LV+ A+ A ++ + A
Sbjct: 165 MALTGRSVYAKPALKMGLVDALSHPQGLVAAAKAAVRGLVAGEVTARKAGGGAQGGLKGL 224
Query: 56 IEPLGEAREIFKFARAQA-----RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQ 110
L E + + QA +K NL P+ I+ + G G +AGL+ EA +F
Sbjct: 225 RSALLERTPLNRLIYRQALEGVQKKTRGNLPAPVKIIETIRIGQEQGMQAGLEAEARNFA 284
Query: 111 KLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSN 170
+L+ S K+LVH+FFA+ K P A R V+ V ILG GLMGSGIA +
Sbjct: 285 ELVFSPESKALVHLFFAKNAAEKNP----YAEAARAVRTVGILGAGLMGSGIAQVSAEAG 340
Query: 171 YPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTI--SLLTGVLDYESFKDVD 228
+ VILK+ N G G V L RV KG+ FE+ + + +T V DY +FK D
Sbjct: 341 HQVILKDRNLSVAVKGKGSVWKELDKRVGKGRSA---FERDVIDARITAVEDYAAFKRAD 397
Query: 229 MVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSP 288
+VIEA++E+V LK+ + ++E I A+NTS+I + I + ++++G H+FSP
Sbjct: 398 LVIEAVLEDVELKRSVLKEVEAVAQEELIFATNTSSIPIREIAAASRRPEQVIGMHYFSP 457
Query: 289 AHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLV 348
+PLLEI++T+ T V+ L +G + KTPIVVG+ GF R+ Y A +L+
Sbjct: 458 VPKLPLLEIIKTDATPDWVLGTALQVGLEQGKTPIVVGDAPGFYTTRILALYMNEALVLL 517
Query: 349 ERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQE 408
+ G + IDRAI FG P+GP L D VG V F ER + E
Sbjct: 518 DEGARVQDIDRAIKDFGFPVGPITLLDEVGIDVGAKINGVLKAPFAERGIA------LAE 571
Query: 409 DKRA-------GETTRKGFYLYDERRKASP--DPEVKKFIEKARSMSGVAIDPKFAKLSE 459
A G RKGFY Y +K + EV +F R +++
Sbjct: 572 GGEALMNAGFLGRKNRKGFYDYSSGKKGEKAVNEEVYRFFSAPRK-----------EVAR 620
Query: 460 KDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
+ I E + ++NEA R EG+ D D+ +V G+GFPP+
Sbjct: 621 ERIQERLPLIMMNEAFRCLEEGVLSSPRDGDLGAVFGLGFPPF 663
>gi|299771812|ref|YP_003733838.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter oleivorans DR1]
gi|298701900|gb|ADI92465.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter oleivorans DR1]
Length = 717
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 168/499 (33%), Positives = 257/499 (51%), Gaps = 23/499 (4%)
Query: 17 GLVDAVVAPNQLVSTARQWALDILEHRRPWVATLY-KTD--KIEPLGEAREIFKFARAQ- 72
G VDAVVA ++L+ A + R W A K D K+ PL E F A+
Sbjct: 183 GAVDAVVAADKLLEAATDLVKQAISGRLNWKAKRQEKLDAVKLNPL-EQMMAFNTAKGAV 241
Query: 73 -ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGT 131
A+ P + +D ++AG L+ EAE F K + +L+ +F +
Sbjct: 242 LAKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAITPQAGALIGLFLNDQVV 301
Query: 132 SKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVR 191
K + G P V + A+LG G+MG GIA P+I+K++ L G+
Sbjct: 302 KKTAKKHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKDIGNPQLALGMSEAN 359
Query: 192 ANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKY 251
+ L +V++ KM + +T++ + L Y+ FK+VD+VIEA+ EN +K+ + AD EK+
Sbjct: 360 SLLTKQVERKKMKPAQMGETLARIRPTLSYDEFKEVDIVIEAVTENPKVKEIVLADTEKH 419
Query: 252 CPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDL 311
+ I+ASNTSTI + + + + VG HFF+P H+MPL+E++R +TS + I
Sbjct: 420 VRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIATT 479
Query: 312 LDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPF 371
+ + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D +D ++KFG PMGP
Sbjct: 480 VVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQVDNVMSKFGWPMGPA 539
Query: 372 RLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETTRKGFYLYDERRK 428
L D+VG + E FP+R YK I M E KR G+ GFY Y+ +K
Sbjct: 540 YLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IQAMYEAKRLGQKNDVGFYKYELDKK 598
Query: 429 A----SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
+ DP + I A ++G + + ++I++ + NE R + I
Sbjct: 599 GKKAKTVDPTAYEII--APFVTG-----EKREFDNQEIIDRMMLAFCNETVRCLEDNIVA 651
Query: 485 KAADLDIASVMGMGFPPYR 503
AA+ D+A +MG+GFPP+R
Sbjct: 652 TAAEADMAMIMGVGFPPFR 670
>gi|424745524|ref|ZP_18173787.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-141]
gi|422942217|gb|EKU37278.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-141]
Length = 717
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 168/499 (33%), Positives = 257/499 (51%), Gaps = 23/499 (4%)
Query: 17 GLVDAVVAPNQLVSTARQWALDILEHRRPWVATLY-KTD--KIEPLGEAREIFKFARAQ- 72
G VDAVVA ++L+ A + R W A K D K+ PL E F A+
Sbjct: 183 GAVDAVVAADKLLEAATDLVKQAISGRLNWKAKRQEKLDAVKLNPL-EQMMAFNTAKGAV 241
Query: 73 -ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGT 131
A+ P + +D ++AG L+ EAE F K + +L+ +F +
Sbjct: 242 LAKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAITPQAGALIGLFLNDQVV 301
Query: 132 SKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVR 191
K + G P V + A+LG G+MG GIA P+I+K++ L G+
Sbjct: 302 KKTAKKHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKDIGNPQLALGMSEAN 359
Query: 192 ANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKY 251
+ L +V++ KM + +T++ + L Y+ FK+VD+VIEA+ EN +K+ + AD EK+
Sbjct: 360 SLLTKQVERKKMKPAQMGETLARIRPTLSYDEFKEVDIVIEAVTENPKVKEIVLADTEKH 419
Query: 252 CPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDL 311
+ I+ASNTSTI + + + + VG HFF+P H+MPL+E++R +TS + I
Sbjct: 420 VRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIATT 479
Query: 312 LDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPF 371
+ + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D +D ++KFG PMGP
Sbjct: 480 VVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQVDNVMSKFGWPMGPA 539
Query: 372 RLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETTRKGFYLYDERRK 428
L D+VG + E FP+R YK I M E KR G+ GFY Y+ +K
Sbjct: 540 YLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IQAMYEAKRLGQKNDVGFYKYELDKK 598
Query: 429 A----SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAV 484
+ DP + I A ++G + + ++I++ + NE R + I
Sbjct: 599 GKKAKTVDPTAYEII--APFVTG-----EKREFDNQEIIDRMMLAFCNETVRCLEDNIVA 651
Query: 485 KAADLDIASVMGMGFPPYR 503
AA+ D+A +MG+GFPP+R
Sbjct: 652 TAAEADMAMIMGVGFPPFR 670
>gi|410643194|ref|ZP_11353696.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
gi|410137372|dbj|GAC11883.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
Length = 719
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 259/513 (50%), Gaps = 13/513 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M T + K +A + G VDAVVAP +L A D ++ + W A + L +
Sbjct: 167 MTTGRDRKAAKALAEGAVDAVVAPEKLRDAALSMLQDAIDGKFGWQARRAQKQAPLKLNK 226
Query: 62 AREIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAG-LQKEAEDFQKLLRSET 117
+ F+ A+A A H P +D V A RAG L+ E + F +L +S+
Sbjct: 227 NESMMSFSTAKAMVFAQAGKHYPAPHAMVDTV-ANAARLDRAGALELENQGFTQLAKSDA 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
K+ V IF A + K G A + VK+ A+LG G+MG GIA + PVI+K+
Sbjct: 286 AKAQVGIFLADQ-LVKSKGKKQAKAATKDVKQTAVLGAGIMGGGIAYQSAVKGTPVIMKD 344
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N+ L+ G+ L +++GK+T T++ + L+Y + KDVD+VIEA++EN
Sbjct: 345 INQGALDLGLNEAAKILGKGMQRGKVTPAVMASTLNNIVPTLEYSAIKDVDLVIEAVVEN 404
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + + E+ ++ SNTSTI +N + E +R G HFF+P H MPL+EI
Sbjct: 405 PKVKGIVLKETEQNVSDDTVICSNTSTISINQLAESLEKPERFCGMHFFNPVHKMPLVEI 464
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +T+ I ++ K+ KTPIVV +C GF VNR+ FPY LV G D +
Sbjct: 465 IRGEKTTDATIATVVAATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLVMDGADFVAV 524
Query: 358 DRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI--MQEDKRAGE 414
D+ + K FG PMGP L D+VG A + PER K P+ + + +R G+
Sbjct: 525 DKVMEKIFGWPMGPAYLLDVVGMDTADHASSVMADGIPERMQKIENDPVTLLYKSERLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY + ++ P KK ++A + K +I+ + P+ NEA
Sbjct: 585 KNGKGFYNFSVDKRGRP---AKKSADEAYELFAPHCADK-RDFEADEIIARVMIPMANEA 640
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI AA+ D+A + G+GFPP+R F
Sbjct: 641 IRCLEEGIVGSAAEADMALLYGLGFPPFRGGVF 673
>gi|421655069|ref|ZP_16095393.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-72]
gi|421662153|ref|ZP_16102321.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC110]
gi|421694080|ref|ZP_16133712.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-692]
gi|421807767|ref|ZP_16243626.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC035]
gi|445407803|ref|ZP_21432396.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-57]
gi|404569919|gb|EKA75004.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-692]
gi|408509206|gb|EKK10881.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-72]
gi|408714956|gb|EKL60086.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC110]
gi|410416408|gb|EKP68181.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC035]
gi|444780952|gb|ELX04877.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-57]
Length = 717
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 256/509 (50%), Gaps = 13/509 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M + P K A G VDAVVA ++L+ A + R W A + + L
Sbjct: 168 MAMATPKKPAAALKDGAVDAVVAADKLLDAATDLVKQAISGRLNWKAKRQEKLEAVKLNP 227
Query: 62 AREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ F A+ A+ P + +D ++AG L+ EAE F K +
Sbjct: 228 LEQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASLTRDEALKAEAEGFAKAAVTPQ 287
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ +F + K + G P V + A+LG G+MG GIA P+I+K+
Sbjct: 288 AEALIGLFINDQVVKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKD 345
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L G+ L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN
Sbjct: 346 IGNPQLALGMKEANNLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTEN 405
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K+ + A+ EK + I+ASNTSTI + + + + VG HFF+P H+MPL+E+
Sbjct: 406 PKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEV 465
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D I
Sbjct: 466 IRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQI 525
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGE 414
D ++KFG PMGP L D+VG + E FP+R YK I M E KR G+
Sbjct: 526 DNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGA-IEAMYEAKRLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY Y+ +K + K A + + + + ++I++ + + NE
Sbjct: 585 KNDVGFYKYELDKKGK---KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLALCNET 641
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R + I A++ D+A +MG+GFPP+R
Sbjct: 642 VRCLEDNIVATASEADMAMIMGIGFPPFR 670
>gi|359455754|ref|ZP_09244961.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Pseudoalteromonas sp.
BSi20495]
gi|358047206|dbj|GAA81210.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Pseudoalteromonas sp.
BSi20495]
Length = 748
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 170/527 (32%), Positives = 267/527 (50%), Gaps = 22/527 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDIL-EHRRPWVATLYKTDKIEPLG 60
MLT K ++ ++A G++D V + L+ A+++A + + P + + K + P G
Sbjct: 166 MLTGKQIRPKQAKKAGVLDDCVPHSVLLKVAKEFATKKKPQAKEPKLDNISKLLESNPFG 225
Query: 61 EAREIFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
IFK A+ +K + P+ I V A V + EAE F L+ S+ K
Sbjct: 226 R-NFIFKKAKENVLKKTGGHYPAPLAIIKAVRASVELDELKAYKTEAESFATLVMSDESK 284
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKEV 178
+L IFFA K D AP + K A+LGGGLMG+GIA + + + PV +K+V
Sbjct: 285 ALRGIFFATTEMKKEWRNDD---APA-ISKTAVLGGGLMGAGIAHVSAVKAKVPVRIKDV 340
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
E+ + + L R+K+ +++ + T++ +TG DY FK +D+VIEA+ E++
Sbjct: 341 AEQGISNAMSYTYKILDKRLKRRIISKADVQLTMNRITGTTDYSGFKHIDLVIEAVFEDL 400
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+LKQ + AD+E+ C + I ASNTS++ ++ I + + ++G H+FSP MPL+EI+
Sbjct: 401 ALKQGMVADVEQQCQANTIFASNTSSLPISQIAAQAARPENVIGLHYFSPVEKMPLVEII 460
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
TS + I +++ +K KTPIVV + GF VNR+ PY A L+ G + ID
Sbjct: 461 PHEGTSQETIARVVNFARKQGKTPIVVKDMAGFYVNRILAPYLNEAANLMLAGEPIEKID 520
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRK 418
A+ +FG P+GP L D VG + + ER M + KR G + +
Sbjct: 521 AALVEFGFPVGPLALLDEVGIDIGSKIAPILEKELGERFKGPDAFVRMIDSKRLGRKSGR 580
Query: 419 GFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVF 478
GFY YD++ KK E + GV P +L++ +I + ++NEA R
Sbjct: 581 GFYEYDKKG--------KKVDESVYELLGVTPAP---RLNKSEIAKRCVSKMLNEAVRCL 629
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR---FVTFIHRGFSKSSSCFKNL 522
+GI D DI ++ G+GFPP+ F G SK SS L
Sbjct: 630 DDGIIASPRDGDIGAIFGIGFPPFLGGPFSYMDKLGASKISSDMSTL 676
>gi|332308448|ref|YP_004436299.1| fatty acid oxidation complex subunit FadB [Glaciecola sp.
4H-3-7+YE-5]
gi|332175777|gb|AEE25031.1| fatty oxidation complex, alpha subunit FadB [Glaciecola sp.
4H-3-7+YE-5]
Length = 719
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 259/513 (50%), Gaps = 13/513 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M T + K +A + G VDAVVAP +L A D ++ + W A + L +
Sbjct: 167 MTTGRDRKAAKALAEGAVDAVVAPEKLRDAALSMLQDAIDGKFGWQARRAQKQAPLKLNK 226
Query: 62 AREIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAG-LQKEAEDFQKLLRSET 117
+ F+ A+A A H P +D V A RAG L+ E + F +L +S+
Sbjct: 227 NESMMSFSTAKAMVFAQAGKHYPAPHAMVDTV-ANAARLDRAGALELENQGFTQLAKSDA 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
K+ V IF A + K G A + VK+ A+LG G+MG GIA + PVI+K+
Sbjct: 286 AKAQVGIFLADQ-LVKSKGKKQAKAATKDVKQTAVLGAGIMGGGIAYQSAVKGTPVIMKD 344
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N+ L+ G+ L +++GK+T T++ + L+Y + KDVD+VIEA++EN
Sbjct: 345 INQGALDLGLNEAAKILGKGMQRGKVTPAVMASTLNNIVPTLEYSAIKDVDLVIEAVVEN 404
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + + E+ ++ SNTSTI +N + E +R G HFF+P H MPL+EI
Sbjct: 405 PKVKGIVLKETEQNVSDDTVICSNTSTISINQLAESLEKPERFCGMHFFNPVHKMPLVEI 464
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +T+ I ++ K+ KTPIVV +C GF VNR+ FPY LV G D +
Sbjct: 465 IRGEKTTDATIATVVAATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLVMDGADFVAV 524
Query: 358 DRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI--MQEDKRAGE 414
D+ + K FG PMGP L D+VG A + PER K P+ + + +R G+
Sbjct: 525 DKVMEKIFGWPMGPAYLLDVVGMDTADHASSVMADGIPERMQKIENDPVTLLYKSERLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY + ++ P KK ++A + K +I+ + P+ NEA
Sbjct: 585 KNGKGFYNFSVDKRGRP---AKKAADEAYELFAPHCADK-RDFEADEIIARVMIPMANEA 640
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI AA+ D+A + G+GFPP+R F
Sbjct: 641 IRCLEEGIVGSAAEADMALLYGLGFPPFRGGVF 673
>gi|403674712|ref|ZP_10936946.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter sp. NCTC 10304]
gi|421651079|ref|ZP_16091451.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC0162]
gi|425749249|ref|ZP_18867229.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-348]
gi|408509091|gb|EKK10767.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC0162]
gi|425489322|gb|EKU55634.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-348]
Length = 717
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 256/509 (50%), Gaps = 13/509 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M + P K A G VDAVVA ++L+ A + R W A + + L
Sbjct: 168 MAMATPKKPAAALKDGAVDAVVAADKLLDAATDLVKQAISGRLNWKAKRQEKLEAVKLNP 227
Query: 62 AREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ F A+ A+ P + +D ++AG L+ EAE F K +
Sbjct: 228 LEQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASLTRDEALKAEAEGFAKAAVTPQ 287
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ +F + K + G P V + A+LG G+MG GIA P+I+K+
Sbjct: 288 AEALIGLFINDQVVKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKD 345
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L G+ L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN
Sbjct: 346 IGNPQLALGMKEANNLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTEN 405
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K+ + A+ EK + I+ASNTSTI + + + + VG HFF+P H+MPL+E+
Sbjct: 406 PKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEV 465
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D I
Sbjct: 466 IRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQI 525
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERT---YKSMIIPIMQEDKRAGE 414
D ++KFG PMGP L D+VG + E FP+R YK I M E KR G+
Sbjct: 526 DNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPEYKGA-IEAMYEAKRLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY Y+ +K + K A + + + + ++I++ + + NE
Sbjct: 585 KNDVGFYKYELDKKGK---KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLALCNET 641
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R + I A++ D+A +MG+GFPP+R
Sbjct: 642 VRCLEDNIVATASEADMAMIMGIGFPPFR 670
>gi|121281866|gb|ABM53499.1| putative enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA
dehydrogenase PaaC [uncultured bacterium CBNPD1 BAC
clone 67]
Length = 708
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 157/509 (30%), Positives = 256/509 (50%), Gaps = 14/509 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + + V +EA LGLVDA+ A L + A + A ++ +P + +L T EP
Sbjct: 168 LIASGRMVGAQEALRLGLVDAI-ARKDLRAEAIELARGLIGQMQPRL-SLRATPAAEP-- 223
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E ++ A+ ++A P I++V + G E F +L+ SE +
Sbjct: 224 ---EAWQAMVAKVNREARGCIAPQRAIELVSQSLTLPFSTGQPNERRTFFELMNSEQSRG 280
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+F A+R K P + + PR + ++ I+G G MGSGIA A + + Y V+L E ++
Sbjct: 281 LRHLFLAEREAGKRPELASV--PPRDLHQIGIIGAGTMGSGIAVAFLDAGYKVMLVEADD 338
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+AG+ RV ++ G++ + +S L + D+VIEAI E++ +
Sbjct: 339 TALQAGLERVNGLYLRSIRSGRIDENTRLNRLSNLVPTTEMSRLAACDLVIEAIFEDLGV 398
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K ++ L P ++A+NTS +DL + + + +R +G HFFSPAHVM LLEIVR
Sbjct: 399 KLELMKKLATLLPASTLIATNTSYLDLEPMADALPAPERFLGLHFFSPAHVMKLLEIVRA 458
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+T + + L IG+K+KK ++ G C GF NR+ + ++E G ID A
Sbjct: 459 RRTGLEALSTALAIGRKLKKIAVISGVCEGFIGNRILAKFRAQCEFMLEEGALPREIDAA 518
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG+ MGPF + DL G +A A + ++ + E R G+ KG+
Sbjct: 519 MEAFGLAMGPFAVQDLAGLDIAWARRKRLAATRDPTDRDVPLVDRLCEQGRFGQKAGKGW 578
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y Y+ R+ PDP V+ + + +G P+ + S ++I + +VNE R+ E
Sbjct: 579 YAYENGRRV-PDPAVEAMVRAHAAATG---RPQRS-FSAQEIQTRVVTAMVNEGARILGE 633
Query: 481 GIAVKAADLDIASVMGMGFPPYRFVTFIH 509
GIA + AD+D+ V G GFP +R H
Sbjct: 634 GIAARPADIDLVLVHGYGFPNWRGGPMHH 662
>gi|421620152|ref|ZP_16061090.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC074]
gi|421797985|ref|ZP_16234019.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-21]
gi|408700812|gb|EKL46257.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC074]
gi|410395610|gb|EKP47904.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-21]
Length = 717
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 256/509 (50%), Gaps = 13/509 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M + P K A G VDAVVA ++L+ A + R W A + + L
Sbjct: 168 MAMATPKKPAAALKDGAVDAVVAADKLLDAATDLVKQAISGRLNWKAKRQEKLEAVKLNP 227
Query: 62 AREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ F A+ A+ P + +D ++AG L+ EAE F K +
Sbjct: 228 LEQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAVTPQ 287
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ +F + K + G P V + A+LG G+MG GIA P+I+K+
Sbjct: 288 AEALIGLFINDQVVKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKD 345
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L G+ L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN
Sbjct: 346 IGNPQLALGMKEANNLLTKQVERKKMKPVQMGETLARIRPTLSYEEFKEVDIVIEAVTEN 405
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K+ + A+ EK + I+ASNTSTI + + + + VG HFF+P H+MPL+E+
Sbjct: 406 PKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEV 465
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D I
Sbjct: 466 IRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQI 525
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGE 414
D ++KFG PMGP L D+VG + E FP+R YK I M E KR G+
Sbjct: 526 DNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGA-IEAMYEAKRLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY Y+ +K + K A + + + + ++I++ + + NE
Sbjct: 585 KNDVGFYKYELDKKGK---KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLALCNET 641
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R + I A++ D+A +MG+GFPP+R
Sbjct: 642 VRCLEDNIVATASEADMAMIMGIGFPPFR 670
>gi|169797435|ref|YP_001715228.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii AYE]
gi|213155751|ref|YP_002317796.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii AB0057]
gi|215484872|ref|YP_002327111.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii AB307-0294]
gi|301347112|ref|ZP_07227853.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii AB056]
gi|301511692|ref|ZP_07236929.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii AB058]
gi|301595845|ref|ZP_07240853.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter baumannii AB059]
gi|332854372|ref|ZP_08435324.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii 6013150]
gi|332867587|ref|ZP_08437735.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii 6013113]
gi|417554499|ref|ZP_12205568.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-81]
gi|417562195|ref|ZP_12213074.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC137]
gi|417575069|ref|ZP_12225922.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Canada BC-5]
gi|421200821|ref|ZP_15657980.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC109]
gi|421456768|ref|ZP_15906106.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii IS-123]
gi|421634072|ref|ZP_16074693.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-13]
gi|421642631|ref|ZP_16083146.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii IS-235]
gi|421649212|ref|ZP_16089607.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii IS-251]
gi|421659228|ref|ZP_16099449.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-83]
gi|421698116|ref|ZP_16137660.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii IS-58]
gi|421800972|ref|ZP_16236939.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Canada BC1]
gi|421806241|ref|ZP_16242113.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-A-694]
gi|254788551|sp|B7H1I0.1|FADB_ACIB3 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|254788552|sp|B7I3P1.1|FADB_ACIB5 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|254788555|sp|B0VE45.1|FADB_ACIBY RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|169150362|emb|CAM88259.1| fatty oxidation complex alpha subunit [Includes: Enoyl-CoA
hydratase ; Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase ; 3-hydroxyacyl-CoA dehydrogenase;
3-hydroxybutyryl-CoA epimerase] [Acinetobacter baumannii
AYE]
gi|213054911|gb|ACJ39813.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii AB0057]
gi|213986372|gb|ACJ56671.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii AB307-0294]
gi|332728048|gb|EGJ59439.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii 6013150]
gi|332733861|gb|EGJ65007.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii 6013113]
gi|395524777|gb|EJG12866.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC137]
gi|395562853|gb|EJG24506.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC109]
gi|400205802|gb|EJO36782.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Canada BC-5]
gi|400210472|gb|EJO41441.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii IS-123]
gi|400390916|gb|EJP57963.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-81]
gi|404573162|gb|EKA78202.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii IS-58]
gi|408512685|gb|EKK14324.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii IS-235]
gi|408513985|gb|EKK15597.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii IS-251]
gi|408705179|gb|EKL50528.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-13]
gi|408707939|gb|EKL53217.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-83]
gi|410406333|gb|EKP58345.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Canada BC1]
gi|410407118|gb|EKP59106.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-A-694]
Length = 717
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 256/509 (50%), Gaps = 13/509 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M + P K A G VDAVVA ++L+ A + R W A + + L
Sbjct: 168 MAMATPKKPAAALKDGAVDAVVAADKLLDAATDLVKQAISGRLNWKAKRQEKLEAVKLNP 227
Query: 62 AREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ F A+ A+ P + +D ++AG L+ EAE F K +
Sbjct: 228 LEQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAVTPQ 287
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ +F + K + G P V + A+LG G+MG GIA P+I+K+
Sbjct: 288 AEALIGLFINDQVVKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKD 345
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L G+ L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN
Sbjct: 346 IGNPQLALGMKEANNLLTKQVERKKMKPVQMGETLARIRPTLSYEEFKEVDIVIEAVTEN 405
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K+ + A+ EK + I+ASNTSTI + + + + VG HFF+P H+MPL+E+
Sbjct: 406 PKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEV 465
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D I
Sbjct: 466 IRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQI 525
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGE 414
D ++KFG PMGP L D+VG + E FP+R YK I M E KR G+
Sbjct: 526 DNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGA-IEAMYEAKRLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY Y+ +K + K A + + + + ++I++ + + NE
Sbjct: 585 KNDVGFYKYELDKKGK---KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLALCNET 641
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R + I A++ D+A +MG+GFPP+R
Sbjct: 642 VRCLEDNIVATASEADMAMIMGIGFPPFR 670
>gi|410622231|ref|ZP_11333069.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410158179|dbj|GAC28443.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 702
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 183/507 (36%), Positives = 263/507 (51%), Gaps = 21/507 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT PV+ +A G+VD +V + L+ A + A + R K +E
Sbjct: 164 MMLTGAPVRAAQAKKYGIVDDMVPQSILLDVAIEMANKKIIKRILQKDVTAKV--LENTS 221
Query: 61 EAREI-FKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I FK AR Q K N P+ ID +EAG + PR G EA F +L+ +
Sbjct: 222 FGRNILFKKAREQTLAKTLGNYPAPMYIIDCIEAGT-NDPRKGYAAEARLFGQLVMTPES 280
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
K L IFFA K GV G+AP +VKK+ +LGGGLMG GIA + P +K+
Sbjct: 281 KQLREIFFATTDMKKESGVE--GVAPIKVKKIGVLGGGLMGGGIAFVTATKAKVPARIKD 338
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N + I L +VKK M + + +K +SLL+G +DY +K DMVIEA+ E+
Sbjct: 339 INTDGIAGAIRYSYDILNKKVKKRFMLKTEMQKQLSLLSGCVDYSGYKQNDMVIEAVFED 398
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
V LKQ++ AD+E+ C + + ASNTS+I + I + + ++G H+FSP MPL E+
Sbjct: 399 VELKQKMVADIEEQCNENTVFASNTSSIPIAEIAAQAKRPENVIGLHYFSPVDKMPLTEV 458
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPY-TQAAFLLVERGTDLYL 356
+ TS Q I ++ K+ KTPIVV + GF VNR+ PY ++A F+ VE G L
Sbjct: 459 IPHALTSDQTISTTVEFAKRQGKTPIVVKDGAGFYVNRILAPYMSEAGFMAVE-GQPLDS 517
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
IDRA+TKFG P+G F+L D VG V F ER + E+ R G+
Sbjct: 518 IDRALTKFGFPVGAFKLLDEVGIDVGTKIIPILKGQFGERFNAPEAFNKLLENDRKGKKN 577
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKA-RSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
+ GFY Y ++ K+I+ + + GV + KF S+ +VE ++NEA
Sbjct: 578 KSGFYDYKAKKPG-------KYIDDSVYKLLGVEPEKKF---SDDTVVERCVLMMLNEAA 627
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
E + D DI ++ G+GFPP+
Sbjct: 628 MCLQEEVIRNPRDGDIGAIFGIGFPPF 654
>gi|333925109|ref|YP_004498688.1| fatty acid oxidation complex subunit alpha [Serratia sp. AS12]
gi|333930062|ref|YP_004503640.1| fatty acid oxidation complex subunit alpha [Serratia plymuthica
AS9]
gi|386326933|ref|YP_006023103.1| Fatty acid oxidation complex subunit alpha [Serratia sp. AS13]
gi|333471669|gb|AEF43379.1| Fatty acid oxidation complex subunit alpha [Serratia plymuthica
AS9]
gi|333489169|gb|AEF48331.1| Fatty acid oxidation complex subunit alpha [Serratia sp. AS12]
gi|333959266|gb|AEG26039.1| Fatty acid oxidation complex subunit alpha [Serratia sp. AS13]
Length = 729
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 261/516 (50%), Gaps = 18/516 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K V ++A +GLVDAVVAP +LV A + ++ + W A Y+ K++PL
Sbjct: 166 IIAAGKDVSAKDALKVGLVDAVVAPEKLVEAALKMLQQAIDGQLDWRA--YRQPKLDPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + A + P+ + +EA G L+ E F L RS
Sbjct: 224 LSPIEAAMSFTTAKGMVLQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARS 283
Query: 116 ETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++LV IF Q S+ + AP + A+LG G+MG GIA L PVI
Sbjct: 284 NEARALVGIFLNDQFVKSQAKKLAKNVEAP---TQAAVLGAGIMGGGIAYQSALKGVPVI 340
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K++++K L G+ L ++++GK+ K + +S + LDY + +++EA+
Sbjct: 341 MKDISDKSLALGMNEAAKLLNKQLERGKLDGLKMAQVLSTIQPTLDYAGIERAQVIVEAV 400
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
+EN +K + +++E +LASNTSTI +N + + G HFF+P H MPL
Sbjct: 401 VENPKIKAAVLSEVEGLIGEDTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRMPL 460
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+R QTS I ++ ++ KTPIVV +C GF VNR+ FPY +L+ G D
Sbjct: 461 VEIIRGEQTSDNTIAAVVAYATRMGKTPIVVNDCPGFFVNRVLFPYFAGFSMLLRDGVDF 520
Query: 355 YLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKR 411
ID+ + K FG PMGP L D+VG A FPER K I +M +++R
Sbjct: 521 RQIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMGKDYRDAIDVMFDNQR 580
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ + GFY Y + K P K E+ ++ P+ +S+++I+ + P++
Sbjct: 581 FGQKNQLGFYRYSQDNKGKPR---KDNDEQTDALLAAVSQPR-QTISDEEIIARMMIPMI 636
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
NE R E I A+ D+A V G+GFPP+ F
Sbjct: 637 NEVVRCLEENIIASPAEADMALVYGIGFPPFHGGAF 672
>gi|421464273|ref|ZP_15912963.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
radioresistens WC-A-157]
gi|400205026|gb|EJO36007.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
radioresistens WC-A-157]
Length = 716
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 250/500 (50%), Gaps = 25/500 (5%)
Query: 17 GLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEP--LGEAREIFKFARAQ-- 72
G VDAVV+ ++L A + R W + +K++P L ++ F A+
Sbjct: 182 GAVDAVVSADKLKDAAVDLVKQAIHGRLDW--KTKRQEKLDPVKLSPLEQMMAFNTAKGA 239
Query: 73 --ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRG 130
A+ P + +D ++AG L+ EAE F K + +L+ +F +
Sbjct: 240 VLAKANPAQYPAPKLLLDSLQAGASLHRDEALKAEAEGFAKAAITPQAGALIGLFLNDQV 299
Query: 131 TSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRV 190
K + G P V + A+LG G+MG GIA P+I+K++ L G+
Sbjct: 300 VKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKDIGNPQLALGMSEA 357
Query: 191 RANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEK 250
L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN +K+ + AD EK
Sbjct: 358 NKLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTENPRIKEAVLADTEK 417
Query: 251 YCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVD 310
+ I+ASNTSTI + + + + VG HFF+P H+MPL+E++R +TS + I
Sbjct: 418 SVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIAT 477
Query: 311 LLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGP 370
+ + +K+ KTPIVV +C GF VNR+ FPY A LL++ G D ID+ + KFG PMGP
Sbjct: 478 TVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLLKDGADFQQIDKVMEKFGWPMGP 537
Query: 371 FRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETTRKGFYLYDERR 427
L D+VG + E FP+R YK I M E KR G+ GFY Y+ R
Sbjct: 538 AYLMDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IQTMYEAKRLGQKNDVGFYKYELDR 596
Query: 428 KA----SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIA 483
K + DP I S DP ++I++ + NE R + I
Sbjct: 597 KGKKAKTVDPTAYDVIAPVVSGEKREFDP-------QEIIDRMMLAFCNETVRCLEDNIV 649
Query: 484 VKAADLDIASVMGMGFPPYR 503
A+ D+A +MG+GFPP+R
Sbjct: 650 ATPAEADMAMIMGVGFPPFR 669
>gi|421787738|ref|ZP_16224072.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-82]
gi|410406155|gb|EKP58176.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii Naval-82]
Length = 717
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 259/511 (50%), Gaps = 17/511 (3%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEP--L 59
M + P K A G VDAVVA ++L+ A + R W + + +K+E L
Sbjct: 168 MAMATPKKPAAALKDGAVDAVVAADKLLDAATDLVKQAISGRLNW--KVKRQEKLEAVKL 225
Query: 60 GEAREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
++ F A+ A+ P + +D ++AG L+ EAE F K +
Sbjct: 226 NPLEQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAVT 285
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++L+ +F + K + G P V + A+LG G+MG GIA P+I+
Sbjct: 286 PQAEALIGLFINDQVVKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIM 343
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ L G+ L +V++ KM + +T++ + L YE FK+VD+VIEA+
Sbjct: 344 KDIGNPQLALGMKEANNLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVT 403
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K+ + A+ EK + I+ASNTSTI + + + + VG HFF+P H+MPL+
Sbjct: 404 ENPKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLV 463
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D
Sbjct: 464 EVIRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQ 523
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRA 412
ID ++KFG PMGP L D+VG + E FP+R YK I M E KR
Sbjct: 524 QIDNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGA-IEAMYEAKRL 582
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ GFY Y+ +K + K A + + + + ++I++ + + N
Sbjct: 583 GQKNDVGFYKYELDKKGK---KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLALCN 639
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R + I A++ D+A +MG+GFPP+R
Sbjct: 640 ETVRCLEDNIVATASEADMAMIMGIGFPPFR 670
>gi|410645454|ref|ZP_11355917.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
gi|410134965|dbj|GAC04316.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
Length = 716
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 172/505 (34%), Positives = 260/505 (51%), Gaps = 15/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLY-KTDKIEPL 59
MMLT V+ ++A G+VD +V + L+ A + A R+P L + + P+
Sbjct: 175 MMLTGSAVRAKQAKKYGIVDDMVPRSILLDVAIEMAKKSKPKRKPVKLDLMGQFLERTPM 234
Query: 60 GEAREIFKFARAQAR-KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
G + +FK AR Q + K N P ID +E G+ G G EA+ F L+ +
Sbjct: 235 GR-KLMFKQARKQTQAKTLGNYPSPERIIDCIETGLEKGNAQGYALEAQHFGHLVMTPES 293
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
+L +FFA K GV G+AP +KK+ +LGGGLMG GIA + PV +K+
Sbjct: 294 AALRSLFFATTEMKKENGVE--GVAPNALKKIGVLGGGLMGGGIAFVTATKAKLPVRIKD 351
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + + L +VK+ M + + +S LTG +DY F + D+VIEA+ E+
Sbjct: 352 IRSDGIAHAMKYSYDILSKKVKRRFMLHSQMQSQLSRLTGSVDYVGFDNTDVVIEAVFED 411
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQ + AD+E +C H I ASNTS+I + I + ++G H+FSP MPL E+
Sbjct: 412 LALKQNMVADVETHCSEHTIFASNTSSIPIGQIAANAKRPENVIGLHYFSPVDKMPLAEV 471
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS Q I +++ KK KTPIVV + GF VNR+ PY + ++ G + I
Sbjct: 472 IAHEGTSDQTISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLAGEPIEQI 531
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+ KFG P+GP +L D VG V + F ER + + D R G+ +
Sbjct: 532 DRALVKFGFPVGPIKLLDEVGIDVGTKISPILVAEFGERFSSAPGFDKLLADDRKGKKNK 591
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
+GFY Y+ ++ P EV + + + I P ++LSE I E ++NEA
Sbjct: 592 RGFYNYEGKK---PGKEVDESVYDL-----LGITPS-SRLSESTIAERCVLLMLNEAAMC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EG+ A D DI ++ G+GFPP+
Sbjct: 643 LDEGVVRSARDGDIGAIFGIGFPPF 667
>gi|146312523|ref|YP_001177597.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter sp. 638]
gi|166972671|sp|A4WCW6.1|FADJ_ENT38 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|145319399|gb|ABP61546.1| 3-hydroxyacyl-CoA dehydrogenase [Enterobacter sp. 638]
Length = 715
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 267/513 (52%), Gaps = 32/513 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
M+LT K ++ +A +GLVD VV P+ ++ TA A+++ + R L ++I P
Sbjct: 167 MILTGKQLRPRQALKVGLVDEVV-PHSILLTA---AVELAQKERQASRHLPVRERILAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
LG A + + +K N +DV+E G+ G +G EA+ F +L +
Sbjct: 223 LGRALLFNRVGKKTEQKTKGNYPATKRILDVIETGLSQGSSSGYAAEAKAFGELAMTPQS 282
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
++L IFFA K PG +AP + + +LGGGLMG GI+ PV +K+
Sbjct: 283 QALRSIFFASTEVKKDPGSE---VAPGPLNAIGVLGGGLMGGGISFVTASKGKLPVRIKD 339
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N K + + L +VK+ + + ++ ++L++G +D+ FK D+VIEA+ E+
Sbjct: 340 INAKGINHALQYSWQLLDQKVKRRHIKASERDRALALISGTIDFSGFKHRDVVIEAVFED 399
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ LKQQ+ AD+E+YC PH I ASNTS++ + I ++++G HFFSP MPL+E+
Sbjct: 400 LQLKQQMVADVEQYCAPHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEV 459
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS Q + ++ + K+ KTPIVV + GF VNR+ PY A L+ G + +
Sbjct: 460 IPHESTSAQTVATVVKLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKVENV 519
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRA 412
D A+ KFG P+GP +L D VG I TG + I + ER + + ++ + D R
Sbjct: 520 DDALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSPPANVVSAILNDDRK 575
Query: 413 GETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
G +GFYLY + + S DP V I + KL+ + E
Sbjct: 576 GRKNGRGFYLYAAKGRKSKKQVDPSVYGLINASGQ----------GKLTAQQCAERCVMM 625
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E + A D DI +V G+GFPP+
Sbjct: 626 MLNEAARCFDEKVIKNARDGDIGAVFGIGFPPF 658
>gi|332307025|ref|YP_004434876.1| fatty acid oxidation complex subunit FadJ [Glaciecola sp.
4H-3-7+YE-5]
gi|332174354|gb|AEE23608.1| fatty acid oxidation complex, alpha subunit FadJ [Glaciecola sp.
4H-3-7+YE-5]
Length = 717
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 172/505 (34%), Positives = 260/505 (51%), Gaps = 15/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLY-KTDKIEPL 59
MMLT V+ ++A G+VD +V + L+ A + A R+P L + + P+
Sbjct: 176 MMLTGSAVRAKQAKKYGIVDDMVPRSILLDVAIEMAKKSKPKRKPVKLDLMGQFLERTPM 235
Query: 60 GEAREIFKFARAQAR-KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
G + +FK AR Q + K N P ID +E G+ G G EA+ F L+ +
Sbjct: 236 GR-KLMFKQARKQTQAKTLGNYPSPERIIDCIETGLEKGNAQGYALEAQHFGHLVMTPES 294
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
+L +FFA K GV G+AP +KK+ +LGGGLMG GIA + PV +K+
Sbjct: 295 AALRSLFFATTEMKKENGVE--GVAPNALKKIGVLGGGLMGGGIAFVTATKAKLPVRIKD 352
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + + L +VK+ M + + +S LTG +DY F + D+VIEA+ E+
Sbjct: 353 IRSDGIAHAMKYSYDILSKKVKRRFMLHSQMQSQLSRLTGSVDYVGFDNTDVVIEAVFED 412
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQ + AD+E +C H I ASNTS+I + I + ++G H+FSP MPL E+
Sbjct: 413 LALKQNMVADVETHCSEHTIFASNTSSIPIGQIAANAKRPENVIGLHYFSPVDKMPLAEV 472
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS Q I +++ KK KTPIVV + GF VNR+ PY + ++ G + I
Sbjct: 473 IAHEGTSDQTISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLAGEPIEQI 532
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+ KFG P+GP +L D VG V + F ER + + D R G+ +
Sbjct: 533 DRALVKFGFPVGPIKLLDEVGIDVGTKISPILVAEFGERFSSAPGFDKLLADDRKGKKNK 592
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
+GFY Y+ ++ P EV + + + I P ++LSE I E ++NEA
Sbjct: 593 RGFYNYEGKK---PGKEVDESVYDL-----LGITPS-SRLSESTIAERCVLLMLNEAAMC 643
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EG+ A D DI ++ G+GFPP+
Sbjct: 644 LDEGVVRSARDGDIGAIFGIGFPPF 668
>gi|406038440|ref|ZP_11045795.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 717
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 259/500 (51%), Gaps = 25/500 (5%)
Query: 17 GLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEP--LGEAREIFKFARAQ-- 72
G VDAVVA ++L A L R W A + +K++P L ++ F A+
Sbjct: 183 GAVDAVVAADKLQEAAIDLVKQALAGRLDWKAK--RQEKLDPIKLNPLEQMMAFNTAKGA 240
Query: 73 --ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRG 130
A+ P + +D ++AG G L+ EA+ F K + ++L+ +F +
Sbjct: 241 VLAKANPAQYPAPKLMLDSLQAGASLGRDDALKAEAQGFAKAAITPQAEALIGLFLNDQI 300
Query: 131 TSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRV 190
K + G P V + A+LG G+MG GIA P+I+K++ L G+
Sbjct: 301 VKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKDIGNAQLALGMKEA 358
Query: 191 RANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEK 250
L +V++ K+T K +T++ + L Y+ FK+VD+VIEA+ EN +K+ + AD E
Sbjct: 359 NGLLTKQVERKKLTPAKMGETLARIRPTLSYDEFKEVDIVIEAVTENPKVKEAVLADTES 418
Query: 251 YCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVD 310
+ I+ASNTSTI + + + + VG HFF+P H+MPL+E++R QTS + +
Sbjct: 419 KVRDNTIIASNTSTISITRLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEQTSEEAVAT 478
Query: 311 LLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGP 370
+ + +K+ KTPIVV +C GF VNR+ FPY A LL++ G D ID+ + KFG PMGP
Sbjct: 479 TVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLLKDGADFQQIDKVMEKFGWPMGP 538
Query: 371 FRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETTRKGFYLY--DE 425
L D+VG + E FP+R YK I M E KR G+ GFY Y D+
Sbjct: 539 AYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IEAMYEAKRLGQKNDVGFYKYVLDK 597
Query: 426 RRKASP--DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIA 483
+ K + DP + I A ++G + + ++I++ + NE R + I
Sbjct: 598 KGKKAKTVDPTAYEII--APFITG-----EKREFDNQEIIDRMMLTFCNETVRCLEDNIV 650
Query: 484 VKAADLDIASVMGMGFPPYR 503
A++ D+A +MG+GFPP+R
Sbjct: 651 ATASEADMAMIMGVGFPPFR 670
>gi|338536562|ref|YP_004669896.1| multifunctional fatty acid oxidation complex subunit alpha
[Myxococcus fulvus HW-1]
gi|337262658|gb|AEI68818.1| multifunctional fatty acid oxidation complex subunit alpha
[Myxococcus fulvus HW-1]
Length = 746
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 188/565 (33%), Positives = 277/565 (49%), Gaps = 52/565 (9%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILE-----HRR-----PWVATL 50
++LT K +K +A LG+VD VV L + A + A ++ E RR VA
Sbjct: 173 LILTGKSLKPGKAKKLGVVDEVVPAPILRAIAVRRAKELAEGKLKVERRHGQGFKGVAAG 232
Query: 51 YKTDKI--------------------EPLGEAREIFKFARAQA-RKQAPNLTHPIVCIDV 89
K+ + PLG + +F AR Q +K P + V
Sbjct: 233 GKSKGLAGFIQGLANKELWAEVALEDNPLGR-KVLFDQARKQLLKKTRGKFPAPEKALQV 291
Query: 90 VEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKK 149
V G+ SG +AG + EA+ F +L+ S+ K LV IFFA K G PR VKK
Sbjct: 292 VRVGLESGHKAGQEAEAKAFGELVVSDVSKRLVEIFFATTALKKENGTASPDAKPREVKK 351
Query: 150 VAILGGGLMGSGIA-TALILSNYPVILKEVNEKFLEAGIGRVRANLQS----RVKKGKMT 204
VA+LGGGLMG GIA A L PV +K+ ++ AG+GR +QS RVK+ +T
Sbjct: 352 VAVLGGGLMGGGIAYVASSLQGVPVRVKDKDD----AGVGRAMKQVQSILDERVKRRSLT 407
Query: 205 QEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTST 264
+ + +L+T DY FK D+VIEA+ E++ LK +I A++E I ASNTS+
Sbjct: 408 RREATAKSALVTAGTDYAGFKSADLVIEAVFEDLKLKHRIIAEVEAVTGDQTIFASNTSS 467
Query: 265 IDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIV 324
I + + + + +++G H+FSP H MPLLE++ T+ V +++G+K KT IV
Sbjct: 468 IPITELAKGSRRPAQVIGMHYFSPVHKMPLLEVITHAGTADWVTATCVEVGRKQGKTVIV 527
Query: 325 VGNCTGFAVNRMFFPY-TQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAI 383
V + GF +R+ PY +AA+LL E G D+ +DRA+ +FG P+GP L D VG VA
Sbjct: 528 VNDGPGFYTSRILAPYMNEAAYLLAE-GADIAELDRALVEFGFPVGPMTLLDEVGIDVAQ 586
Query: 384 ATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKAR 443
G F +R + + D R G T KGFYLY+ +K DP + +
Sbjct: 587 KVGPIMEAAFGKRMAAPKALEKVVADGRLGRKTEKGFYLYEGGKKQEVDPSIYALLPHGT 646
Query: 444 SMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ E + +VNEA R EGI A D D+ ++ G+GFPP+
Sbjct: 647 ERR---------SFDRAEMAERVVLQMVNEAIRCLGEGILRSARDGDVGAIFGLGFPPFL 697
Query: 504 FVTFIHRGFSKSSSCFKNLLCYFDQ 528
F + + + L + D+
Sbjct: 698 GGPFHYVDSRGPADVLRKLEHFHDK 722
>gi|344282369|ref|XP_003412946.1| PREDICTED: peroxisomal bifunctional enzyme-like [Loxodonta
africana]
Length = 723
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 164/516 (31%), Positives = 259/516 (50%), Gaps = 25/516 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + + V EA LG+VD VV + V A + A +L+ +P + ++ L
Sbjct: 151 LITSGRHVPAYEALKLGIVDEVVNSDP-VEEAIKLAQRVLD--QPLESRRLCNKPVQSLP 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
IF A + RKQ P C+ V+A V G++KE E F L S ++
Sbjct: 208 NMDAIFNEALLKMRKQYPGCLSRETCVLGVQAAVCYPYEVGIKKEEELFMYLRESGQARA 267
Query: 121 LVHIFFAQRGTSK--VP-GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L + FFA++ +K +P G + + R + V +LG G MG GI +L + PVI E
Sbjct: 268 LQYAFFAEKVANKWSIPSGASWKTASARPISSVGVLGLGTMGKGIVISLARARIPVIGVE 327
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+++ LE + + L+ K M Q+ +I + VD+VIEA+ E
Sbjct: 328 SDKQQLETANKVINSFLEKEASK--MQQDGHPWSIPKPRLTTSMKELGGVDLVIEAVFEE 385
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+SLK+++FA+L C P L +NTS +D++ I ++GAHFFSPA VM LLE+
Sbjct: 386 MSLKKKVFAELSAICKPETFLCTNTSALDIDKIASAADRPHLVIGAHFFSPAQVMTLLEV 445
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TSP + ++ + KK+KK +VVGNC F NRM PY ++ L+E G+ +
Sbjct: 446 IPGKYTSPTTVATVMSLAKKMKKIGVVVGNCFAFVGNRMLAPYYNQSYFLLEEGSKPEEV 505
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAI-------ATGMQFIENFPERTYKSM----IIPIM 406
DR + +FG MGPFR +DL G V TG + P R + I ++
Sbjct: 506 DRVLEEFGFKMGPFRTSDLSGLDVGWRSRKEQGLTGPELPPRTPARKRGDVRYCPIPDML 565
Query: 407 QEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVE 464
E R G+ T KG+Y YD+ R PDP + F+ + R I+P+ +S+++I+E
Sbjct: 566 CELGRFGQKTGKGWYQYDKPLGRIYKPDPWLANFLSQYRETQ--HIEPR--TISQEEILE 621
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFP 500
+ ++NE R+ EGIA + +D+ + G +P
Sbjct: 622 RCLYSLINEGFRILGEGIAARPEHIDVIYLHGYAWP 657
>gi|421856630|ref|ZP_16288993.1| fatty acid oxidation complex subunit alpha [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|403187921|dbj|GAB75194.1| fatty acid oxidation complex subunit alpha [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 716
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 250/500 (50%), Gaps = 25/500 (5%)
Query: 17 GLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEP--LGEAREIFKFARAQ-- 72
G VDAVV+ ++L A + R W + +K++P L ++ F A+
Sbjct: 182 GAVDAVVSADKLKDAAVDLVKQAIHGRLDW--KTKRQEKLDPVKLSTLEQMMAFNTAKGA 239
Query: 73 --ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRG 130
A+ P + +D ++AG L+ EAE F K + +L+ +F +
Sbjct: 240 VLAKANPAQYPAPKLLLDSLQAGASLHRDEALKAEAEGFAKAAITPQAGALIGLFLNDQV 299
Query: 131 TSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRV 190
K + G P V + A+LG G+MG GIA P+I+K++ L G+
Sbjct: 300 VKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKDIGNPQLALGMSEA 357
Query: 191 RANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEK 250
L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN +K+ + AD EK
Sbjct: 358 NKLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTENPRIKEAVLADTEK 417
Query: 251 YCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVD 310
+ I+ASNTSTI + + + + VG HFF+P H+MPL+E++R +TS + I
Sbjct: 418 SVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIAT 477
Query: 311 LLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGP 370
+ + +K+ KTPIVV +C GF VNR+ FPY A LL++ G D ID+ + KFG PMGP
Sbjct: 478 TVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLLKDGADFQQIDKVMEKFGWPMGP 537
Query: 371 FRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETTRKGFYLYDERR 427
L D+VG + E FP+R YK I M E KR G+ GFY Y+ R
Sbjct: 538 AYLMDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IQTMYEAKRLGQKNDVGFYKYELDR 596
Query: 428 KA----SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIA 483
K + DP I S DP ++I++ + NE R + I
Sbjct: 597 KGKKAKTVDPTAYDVIAPVISGEKREFDP-------QEIIDRMMLAFCNETVRCLEDNIV 649
Query: 484 VKAADLDIASVMGMGFPPYR 503
A+ D+A +MG+GFPP+R
Sbjct: 650 ATPAEADMAMIMGVGFPPFR 669
>gi|238763689|ref|ZP_04624649.1| 3-hydroxyacyl-CoA dehydrogenase [Yersinia kristensenii ATCC 33638]
gi|238698167|gb|EEP90924.1| 3-hydroxyacyl-CoA dehydrogenase [Yersinia kristensenii ATCC 33638]
Length = 729
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 171/520 (32%), Positives = 261/520 (50%), Gaps = 26/520 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ K + ++A +GLVDAVVAP +L A ++ + W A + K+EPL
Sbjct: 166 IIAAGKDIIAKDALKVGLVDAVVAPEKLADAALAMLKQAIDGKLDWKAA--RLPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + A + P+ + +EA G L+ E F +L S
Sbjct: 224 LNPTEAAMCFTIAKGMVMQVAGKHYPAPLTAVKTIEAAAKLGRTEALKLETTSFVRLAGS 283
Query: 116 ETCKSLVHIFFAQ---RGTSK--VPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSN 170
++LV IF +G +K GV+ AP K+ A+LG G+MG GIA L
Sbjct: 284 NEARALVGIFLNDQYVKGQAKKLSKGVS----AP---KQAAVLGAGIMGGGIAYQSALKG 336
Query: 171 YPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMV 230
PVI+K++NEK L G+ L ++++GK+ K ++ + LDY + ++
Sbjct: 337 VPVIMKDINEKSLTLGMNEAAKLLNKQLERGKIDGLKMANILATIQPTLDYAGIERAQLI 396
Query: 231 IEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAH 290
+EA++EN +K + A++E +LASNTSTI ++ + + + G HFF+P H
Sbjct: 397 VEAVVENPKVKAAVLAEVETLIGEETVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVH 456
Query: 291 VMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVER 350
MPL+EI+R +TS + I ++ ++ KTPIVV +C GF VNR+ FPY +L+
Sbjct: 457 RMPLVEIIRGTKTSDKTIAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLLRD 516
Query: 351 GTDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQ 407
G D ID+ + K FG PMGP L D+VG A FPER K + +M
Sbjct: 517 GADFRQIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMF 576
Query: 408 EDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
+++R G+ +GFY Y + K P E EK + I K S++DI+
Sbjct: 577 DNQRFGQKNGQGFYRYTQDAKGKPRKEND---EKVDELLAQVIQ-SVQKFSDEDIIARTM 632
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
P++NE R EGI A+ D+A V G+GFPP+ F
Sbjct: 633 IPMINEVVRCLEEGIIASPAEGDMALVYGIGFPPFHGGVF 672
>gi|153006999|ref|YP_001381324.1| multifunctional fatty acid oxidation complex subunit alpha
[Anaeromyxobacter sp. Fw109-5]
gi|152030572|gb|ABS28340.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Anaeromyxobacter sp.
Fw109-5]
Length = 723
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 184/515 (35%), Positives = 269/515 (52%), Gaps = 24/515 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHR-----RPWVATLYKTDK 55
++L K VK ++A +GLVD VV LVS ARQ AL + + R + + + +
Sbjct: 173 LILAGKTVKAKKALKIGLVDEVVPSQLLVSVARQRALALATGKLRREPRRKASPVERATR 232
Query: 56 IEPLGEAREIFKFARAQARKQAPNLTH-----PIVCIDVVEAGVVSGPRAGLQKEAEDFQ 110
+ L E R + QARK T P+ ++ +E G G GL+KEA+ F
Sbjct: 233 V-ALEENRVGRELLFRQARKAVLAKTKGMYPAPVRALEAIEYGYQKGFAKGLEKEAQLFG 291
Query: 111 KLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSN 170
+L SE + L+ IFFA K GV D + PR ++V +LGGGLMGSGI+ +
Sbjct: 292 QLAVSEVARRLMEIFFATTALKKDTGVDDPAVRPRPARRVGVLGGGLMGSGISFVTANAG 351
Query: 171 YPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMV 230
PV ++E ++ +G VRA L RVK+ + + + ++ + L+T D+ + VD++
Sbjct: 352 IPVRIRERDDAAAGKALGSVRALLDERVKRRSIDRLERDERMRLVTATTDWSGYAAVDVL 411
Query: 231 IEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAH 290
IEA+ E+++LKQ++ E P I ASNTS+I + I E + + ++G H+FSP
Sbjct: 412 IEAVFEDLALKQEMVRAFEA-VNPTGIFASNTSSIPITKIAEASAHPETVLGMHYFSPVQ 470
Query: 291 VMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPY-TQAAFLLVE 349
MPLLEI+ T +TS + + +GKK KT IVVG+ GF +R+ PY +AA LLVE
Sbjct: 471 KMPLLEIIVTEKTSKEATATAVALGKKQGKTVIVVGDGPGFYTSRILAPYMNEAAELLVE 530
Query: 350 RGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQED 409
G + +DRA+ +FG P+GP L D VG V G + F R + + +
Sbjct: 531 -GAAVEDLDRALVEFGFPVGPITLLDEVGIDVGEKVGKILHDAFGARMASPAALHDVVKA 589
Query: 410 KRAGETTRKGFYLYDERRKASP-DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFF 468
R G RKGFY Y E +K D V + RS A D +I E +
Sbjct: 590 GRLGRKNRKGFYTYGEDKKEKRVDVTVYDLLPGGRSRKPFAHD---------EIRERVVL 640
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+VNEA R EGI A D D+ +V G+GFPP+R
Sbjct: 641 QMVNEAIRCLGEGILRSARDGDVGAVFGLGFPPFR 675
>gi|293610105|ref|ZP_06692406.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427423057|ref|ZP_18913223.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-136]
gi|292827337|gb|EFF85701.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425700157|gb|EKU69748.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-136]
Length = 717
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 160/494 (32%), Positives = 250/494 (50%), Gaps = 13/494 (2%)
Query: 17 GLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQ---- 72
G VDAVVA ++L+ A + R W A + + L ++ F A+
Sbjct: 183 GAVDAVVAADKLLEAATDLVKQAISGRLNWKAKRQEKLEAVKLNPLEQMMAFNTAKGAVL 242
Query: 73 ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTS 132
A+ P + +D ++AG L+ EAE F K + +L+ +F +
Sbjct: 243 AKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAITPQAGALIGLFLNDQVVK 302
Query: 133 KVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRA 192
K + G P V + A+LG G+MG GIA P+I+K++ L G+ +
Sbjct: 303 KTAKKYEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKDIGNPQLALGMKEANS 360
Query: 193 NLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYC 252
L +V++ KM + +T++ + L Y+ FK+VD+VIEA+ EN +K+ + AD EK
Sbjct: 361 LLTKQVERKKMKPAQMGETLARIRPTLSYDEFKEVDIVIEAVTENPKVKEMVLADTEKNV 420
Query: 253 PPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLL 312
+ I+ASNTSTI + + + + VG HFF+P H+MPL+E++R +TS + I +
Sbjct: 421 RENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIATTV 480
Query: 313 DIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFR 372
+ +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D +D ++KFG PMGP
Sbjct: 481 VLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQVDNVMSKFGWPMGPAY 540
Query: 373 LADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETTRKGFYLYDERRKA 429
L D+VG + E FP+R YK I M E KR G+ GFY Y+ +K
Sbjct: 541 LIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IQAMYEAKRLGQKNDVGFYKYELDKKG 599
Query: 430 SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADL 489
+ K A + + + + ++I++ + NE R + I AA+
Sbjct: 600 K---KAKTVDPTAYEIIAPFVTGEKREFDNQEIIDRMMLAFCNETVRCLEDNIVATAAEA 656
Query: 490 DIASVMGMGFPPYR 503
D+A +MG+GFPP+R
Sbjct: 657 DMAMIMGVGFPPFR 670
>gi|260786960|ref|XP_002588524.1| hypothetical protein BRAFLDRAFT_220780 [Branchiostoma floridae]
gi|229273687|gb|EEN44535.1| hypothetical protein BRAFLDRAFT_220780 [Branchiostoma floridae]
Length = 719
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 168/526 (31%), Positives = 272/526 (51%), Gaps = 40/526 (7%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDI----LEHRRPWVATLYKTDKI 56
M+ + + + ++A + GL+D VV P+ L+ A +A + LE RR T+ D+
Sbjct: 151 MVTSGQTLSAQQALTAGLLDKVV-PDDLLKKAVGFARSVDVQGLEARRVSSWTVPDVDRA 209
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGP-RAGLQKEAEDFQKLLRS 115
E ++ AR +++ P+ + ++A ++ P G+++EAE + L S
Sbjct: 210 E------DVLDAARKTLVRRSRGAIAPLTGLQAIQASLL--PFETGMKREAELGRYLWTS 261
Query: 116 ETCKSLVHIFFAQRGTSK--VP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSN 170
+L + FFA+R + +P V + P +K V +LG G MG GI+ +L+ +
Sbjct: 262 WQAAALRYAFFAERAVKRWHIPRNKNVNYRTVEPMDIKSVGVLGAGTMGIGISISLLQAG 321
Query: 171 YPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMV 230
V+L EVN+ L+ G + L+ +++ K + L DY ++VD+V
Sbjct: 322 LKVVLTEVNKAQLDKGKSYCKFWLKKSNSNTELSGGKPQPM--QLRATTDYSQLREVDLV 379
Query: 231 IEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAH 290
IEA+ E+++LK+++F L+ P ILA+NTS +D++ I T D+++G HFFSPA
Sbjct: 380 IEAVFEDLALKKKVFRQLDAVTNPRTILATNTSGLDIDKIAAATQRPDKVIGTHFFSPAQ 439
Query: 291 VMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRM-FFPYTQAAFLLVE 349
VM LLE + TS + I + +G I K ++VGNC GF NRM +T+A FLL E
Sbjct: 440 VMRLLENIYGRHTSGETIATAMQLGATIGKVGVLVGNCPGFVGNRMKGLNFTEAMFLL-E 498
Query: 350 RGTDLYLIDRAITKFGMPMGPFRLADLVGFGVA----IATGMQFIENFPERT---YK--- 399
G D +D+A+ +FG MGPFR++DL G V I G+ P T Y+
Sbjct: 499 EGADPQDVDKALEEFGFAMGPFRVSDLAGGDVHWRRRIQAGLTTEHGPPPYTPVLYRQGN 558
Query: 400 --SMIIPIMQEDKRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKFAK 456
S + ++ R G+ T G+Y Y R A PD EV + I K R G +
Sbjct: 559 RYSPLADMLCMQGRFGQKTGAGWYRYKSGSRTALPDAEVHRLIHKHRQDHGF----QRRN 614
Query: 457 LSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
+S ++IVE FP++NE R+ EG+A D+D+ ++G G+P +
Sbjct: 615 ISSQEIVERCLFPLINEGFRILEEGLAAGPQDIDVIFLLGFGWPRH 660
>gi|413945014|gb|AFW77663.1| hypothetical protein ZEAMMB73_186479 [Zea mays]
Length = 352
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 150/192 (78%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSK +KG+ AH LGLVDAV + N+LV+TA WAL+I E ++PW +L++TD++ L
Sbjct: 159 MMLTSKTIKGKMAHELGLVDAVTSANKLVNTACSWALEIFEKKKPWFKSLHRTDRLPDLE 218
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
E ++I KFAR QA +A N+ HPIVCIDV++ G++SGPRAGL KE + L +S+T KS
Sbjct: 219 EVKDILKFARVQAEMKAANVQHPIVCIDVIKEGIISGPRAGLMKEVLSGKMLEQSQTSKS 278
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H FFAQR TSK+P +T++GL R++KK AI+GGGLMGSGIAT LIL+N+ V+LKEVNE
Sbjct: 279 LRHFFFAQRATSKIPNITNIGLTARKIKKAAIVGGGLMGSGIATILILNNFNVVLKEVNE 338
Query: 181 KFLEAGIGRVRA 192
+FL AGI R++
Sbjct: 339 QFLSAGINRIKG 350
>gi|423684764|ref|ZP_17659572.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
fischeri SR5]
gi|371495811|gb|EHN71405.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
fischeri SR5]
Length = 725
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 165/515 (32%), Positives = 265/515 (51%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ T KP + ++A +LG++D VV+ L++ + +E + W + +T K PL
Sbjct: 166 VITTGKPKRAKDALALGMIDGVVSRETLITDSVTMLKKAIEGQLDWQSR--RTQKKAPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A++ K A + P+ + +E A L+ E ++F L ++
Sbjct: 224 LSPLEAAMSFNVAKSMIMKMAGKHYPAPMTAVKSIENSAFMDRDAALEVENKNFVALTQT 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+ KSLV IF + + P V A+LG G+MG GIA PV++
Sbjct: 284 DVAKSLVGIFLNDQLVKSKAKQSIKNSEP--VTSAAVLGAGIMGGGIAYQSASKGVPVLM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ ++ L+ G+ L ++++G+++ K + +S +T L+Y S ++ D+V+EA++
Sbjct: 342 KDIAQQSLDLGMSEASKLLNKQLERGRLSGLKMAQVLSSITPSLNYASIENKDIVVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E H ILASNTSTI ++L+ + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVENEVNEHVILASNTSTIPISLLAKSLKRPENFCGMHFFNPVHRMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++R +TS Q I ++ ++ KTPIVV +C GF VNR+ FPY LL+ G D
Sbjct: 462 EVIRGEKTSQQTIDRVVAYASQMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGGDYQ 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A + FPER K+ +I M E R
Sbjct: 522 QIDKVMEKEFGWPMGPAYLLDVVGIDTAHHAQAVMAQGFPERMAKNGRDVIDAMFESDRY 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ GFY Y RK P KK I+++ + + + + I + P++N
Sbjct: 582 GQKNGSGFYAYSIDRKGKP----KKNIDESTAGIIATVTNTTQPYTSEQISARMMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI A+ D+A V G+GFPP++ F
Sbjct: 638 EVIRCLDEGIIASPAEADMALVYGLGFPPFKGGVF 672
>gi|290473592|ref|YP_003466462.1| multifunctional 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase/ 3-hydroxyacyl-CoA dehydrogenase
[Xenorhabdus bovienii SS-2004]
gi|289172895|emb|CBJ79666.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA
dehydrogenase (C-terminal) [Xenorhabdus bovienii
SS-2004]
Length = 728
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 259/521 (49%), Gaps = 28/521 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K + EEA GL+DAVV +LV A ++ W A + K+ PL
Sbjct: 166 IITAGKDIGAEEALKNGLIDAVVPTEKLVDAAVSILELAIKGDLDWQAA--RQPKLSPLN 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
E F A+ K A P+ PI + +E G L+ EAE F L +
Sbjct: 224 LNDVERTMSFTVAKGMVMKVAGPHYPAPITAVKTIEKAATLGRDEALKLEAESFVPLAHT 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVA------ILGGGLMGSGIATALILS 169
++LV IF + GLA + +K+V ILG G+MG GIA
Sbjct: 284 TVARALVGIFLNDQYVK--------GLAKKHLKEVTVPQHATILGAGIMGGGIAYQSARK 335
Query: 170 NYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDM 229
PV++K++N+K L+ G+ L + ++G++ K K +S + L Y + +
Sbjct: 336 GVPVLMKDINQKALDLGVNEAAKLLHKQFERGRLDAMKMAKILSSIQPTLSYAGIEQSQI 395
Query: 230 VIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPA 289
V+EA++EN +K + A+ E + CILASNTSTI + + + + G HFF+P
Sbjct: 396 VVEAVVENPKIKAAVLAETESHINDDCILASNTSTIPITELAKSLKRPENFCGMHFFNPV 455
Query: 290 HVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVE 349
H MPL+EI+R +TS + I ++ K+ KTPIVV +C GF VNR+ FPY +L+
Sbjct: 456 HRMPLVEIIRGEKTSDKTISTVVAYASKMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLLR 515
Query: 350 RGTDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIM 406
G D ID+ + K FG PMGP L D+VG A + FPER + I ++
Sbjct: 516 DGGDFRQIDKIMEKEFGWPMGPAYLIDVVGIDTAHHAQAVMAQGFPERMTRDYHDAIDVL 575
Query: 407 QEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMI 466
E++R G+ GFY Y + +K P E + +++ ++G++ PK S +DI+
Sbjct: 576 FENQRYGQKNDVGFYKYTQDKKGKPKKEQDETVDQL--LAGIS-HPK-QIFSGEDIIART 631
Query: 467 FFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
P++NE R EG+ A+ D+A V G+GFPP+ F
Sbjct: 632 MIPMINEVVRCLEEGVIASPAEADMALVYGLGFPPFHGGVF 672
>gi|59710632|ref|YP_203408.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
fischeri ES114]
gi|75431918|sp|Q5E8X6.1|FADB_VIBF1 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|59478733|gb|AAW84520.1| fused 3-hydroxybutyryl-CoA
epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
dehydrogenase [Vibrio fischeri ES114]
Length = 725
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 262/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ T KP + ++A +LG+VD VV+ L++ + +E + W + +T K PL
Sbjct: 166 VITTGKPKRAKDALALGMVDGVVSRETLITDSVTMLKKAIEGQLDWQSR--RTQKKAPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ K A + P+ + +E A L+ E ++F L ++
Sbjct: 224 LSPLEAAMSFNVAKGMIMKMAGKHYPAPMTAVKSIENSAFMDRDAALEVENKNFVALTQT 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+ KSLV IF + P V A+LG G+MG GIA PV++
Sbjct: 284 DVAKSLVGIFLNDQLVKSKAKQAIKNSEP--VTSAAVLGAGIMGGGIAYQSASKGVPVLM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ ++ L+ G+ L ++++G+++ K K +S +T L+Y S ++ D+V+EA++
Sbjct: 342 KDIAQQSLDLGMSEASKLLNKQLERGRLSGLKMAKVLSSITPSLNYASIENKDIVVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E H ILASNTSTI ++L+ + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVENEVNEHAILASNTSTIPISLLAKSLKRPENFCGMHFFNPVHRMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++R +TS Q I ++ ++ KTPIV+ +C GF VNR+ FPY LL+ G D
Sbjct: 462 EVIRGEKTSQQTIDRVVAYASQMGKTPIVINDCPGFFVNRVLFPYFAGFSLLLRDGGDYQ 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID + K FG PMGP L D+VG A + FPER K+ +I M E R
Sbjct: 522 QIDNVMEKEFGWPMGPAYLLDVVGIDTAHHAQAVMAQGFPERMAKNGRDVIDAMFESDRY 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ GFY Y RK P KK I+++ + + + + I + P++N
Sbjct: 582 GQKNGSGFYAYSIDRKGKP----KKNIDESTAGIIATVTNTTQPYTSEQISARMMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI A+ D+A V G+GFPP++ F
Sbjct: 638 EVIRCLDEGIIASPAEADMALVYGLGFPPFKGGVF 672
>gi|399521410|ref|ZP_10762150.1| enoyl-CoA hydratase / dodecenoyl-CoA delta-isomerase /
3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA
epimerase [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399110648|emb|CCH38710.1| enoyl-CoA hydratase / dodecenoyl-CoA delta-isomerase /
3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA
epimerase [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 715
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 263/514 (51%), Gaps = 29/514 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + +EA +G VDAVV+ ++L V A LD R+P + L K + I
Sbjct: 170 SGKENRADEALKVGAVDAVVSADKLQAAALDLVKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
E + F+ A+ QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQM----MCFETAKGFVAGQAGPNYPAPVEAIKTIQKAANLGRDKALEVEAAGFVKLAKT 284
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+SL+ +F + K D R VK A+LG G+MG GIA P+++
Sbjct: 285 SVAESLIGLFLNDQELKKKAKHHDE--IARDVKLAAVLGAGIMGGGIAYQSASKGTPILM 342
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ E+ ++ G+ L RV+KG+MT K + ++ + + Y F +VD+V+EA++
Sbjct: 343 KDIREEGIQMGLNEASKLLCKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVV 402
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +KQ + A++E ILASNTSTI ++L+ + VG HFF+P H+MPL+
Sbjct: 403 ENPKVKQIVLAEVEDAVREDAILASNTSTISISLLARALKRPENFVGMHFFNPVHMMPLV 462
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++R ++S + + KK+ K PIVV +C GF VNR+ FPY L+ G D
Sbjct: 463 EVIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFV 522
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAG 413
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G
Sbjct: 523 RIDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLG 582
Query: 414 ETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+ KGFY Y+ ++ P DP + ++ + ++ + +++++DI+ + P
Sbjct: 583 QKNGKGFYAYETDKRGKPKKVSDPAAYELLKS------IVVEER--EVTDEDIINFMMIP 634
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 635 LCMETVRCLEDGIVDTAAEADMGLIYGIGFPPFR 668
>gi|336312154|ref|ZP_08567109.1| enoyl-CoA hydratase [Shewanella sp. HN-41]
gi|335864410|gb|EGM69502.1| enoyl-CoA hydratase [Shewanella sp. HN-41]
Length = 708
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 255/506 (50%), Gaps = 14/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL +P +L +E
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRASKPIKKSLV-NQVLEGTS 223
Query: 61 EAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I F A Q K+ N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQATKQVEKKTQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVISKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G PR+VKK ILGGGLMG GIA+ + P +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+NEK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 342 INEKGLSNALAYAYKLLDKGVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ ++ I E + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLGDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-AIDPKFAKLSEKDIVEMIFFPVVNEACR 476
KGFY Y ++ + KK S+ GV I P K K + E ++NEA R
Sbjct: 582 KGFYQYGQKDSS------KKAKVVDESVYGVLGIKPGTNK-DAKAVAERCVVQMLNEAVR 634
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPY 502
EGI D DI ++ G+GFPP+
Sbjct: 635 CLDEGIIASPRDGDIGAIFGIGFPPF 660
>gi|301614191|ref|XP_002936579.1| PREDICTED: peroxisomal bifunctional enzyme [Xenopus (Silurana)
tropicalis]
Length = 727
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 163/521 (31%), Positives = 265/521 (50%), Gaps = 25/521 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+++ + V EA LG+VD VV P+ ++ A Q A ++ +P + T+ ++
Sbjct: 151 IIVRGRHVPATEAFQLGIVDEVV-PSSAIAAAVQMARKVIG--KPMDSRRLSTNAVQYNI 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
A +A++Q P+ CI+ V A + G++KE + F L + ++
Sbjct: 208 NVDAFLDTALEKAKRQFRGAQAPLACIEAVRASAQLPYQRGIEKERQLFASLWATGQPQA 267
Query: 121 LVHIFFAQRGTSK--VP-GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+ FF++R K +P G + P +++ A++G G MG GI T+L SN PVI E
Sbjct: 268 QQYAFFSERNVGKWTLPSGERWDNVRPCQIRTAAVIGLGTMGRGIVTSLSKSNIPVIALE 327
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISL--LTGVLDYESFKDVDMVIEAII 235
+ K L++G V + L+ +K K F + L + L++E K+VD+VIEA+
Sbjct: 328 QDTKQLDSGKKAVNSLLEREAEKLKKQGNSFAEGNGLGSVHFTLNFEDLKNVDLVIEAVY 387
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN++LK+ IF L P L +NTS ++++ I T ++G HFFSPA++M LL
Sbjct: 388 ENMNLKKDIFRKLSSIMKPDAFLCTNTSGLNIDEIASVTNRPQLVIGTHFFSPANIMRLL 447
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E+VR TSP I + +GK + K ++VGNC F NRM PY + A L+E G
Sbjct: 448 EVVRGRHTSPTTIATAMSLGKMLGKVAVLVGNCPLFVGNRMLGPYLEQANYLLEEGYYPE 507
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQ-------FIENFPERTYKSM----IIP 404
+D+A+ +FG MGPFR+ DL G V + M+ P R + +
Sbjct: 508 EVDQALEEFGFAMGPFRMMDLAGLDVGWRSRMEKGLAGSGVPPGTPARQREGNRYCPLAD 567
Query: 405 IMQEDKRAGETTRKGFYLYDE--RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDI 462
++ E R G+ + KG+Y Y++ R A PDP V+ F+ K R + K + + I
Sbjct: 568 MLCELGRFGQKSGKGWYQYEKPGGRHAHPDPWVRDFLAKYRKTYNI----KQQAVHPEQI 623
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++ + ++NE RV +GIA D+D+ G G+P +R
Sbjct: 624 LQRCLYALINEGFRVLEDGIASGPEDIDVIYNNGYGWPKHR 664
>gi|397164597|ref|ZP_10488052.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
radicincitans DSM 16656]
gi|396093745|gb|EJI91300.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
radicincitans DSM 16656]
Length = 715
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 166/512 (32%), Positives = 258/512 (50%), Gaps = 30/512 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
M+LT K ++ +A +GLVD VV + L+ + A+D+ + RP L +++ P
Sbjct: 167 MILTGKQLRPRQALKVGLVDDVVPQSILL----EAAVDLAKQGRPVARHLPVRERVLAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
LG A ++ +K N + V+E G+ G +G EA F +L +
Sbjct: 223 LGRALLFRMVSKKTEQKTQGNYPAATRILSVIETGLTQGRSSGYDAEARAFGQLAMTPQS 282
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
++L H+FFA G K PG +++ P V G G TA + PV +K++
Sbjct: 283 QALRHLFFASTGVKKDPG-SEVQAGPLNTIGVLGGGLMGGGIAFVTA-SKAGLPVRIKDI 340
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N K + + L +V++ + + +K ++ ++G LD+ F D+VIEA+ E++
Sbjct: 341 NAKGINHALKYSWEELDKKVRRRYLKAGERDKQLAKISGTLDFSGFAQRDLVIEAVFEDL 400
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+LKQ++ A++E +C H I ASNTS++ + I ++I+G HFFSP MPL+E++
Sbjct: 401 ALKQKMVAEVEAHCSAHTIFASNTSSLPIGDIAAHAARPEKIIGLHFFSPVEKMPLVEVI 460
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
T Q I + + KK KTPIVV + GF VNR+ PY A L+ G + ID
Sbjct: 461 PHAGTDEQTIATTVKLAKKQGKTPIVVADKAGFYVNRILAPYINEAIRLLSEGECIEDID 520
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRAG 413
RA+ KFG P+GP +L D VG I TG + I + ER + + I+ + D R G
Sbjct: 521 RALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLESAYGERFSAPASIVSAILNDDRKG 576
Query: 414 ETTRKGFYLY---DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
+GFYLY + K PDP + I SG +LS + + E +
Sbjct: 577 RKNGRGFYLYPAKGRKSKKQPDPAIYPLI----GASG------GGRLSAEQMAERCVLLM 626
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
+NEA R F E + A D DI +V G+GFPP+
Sbjct: 627 LNEAVRCFDEQVIRSARDGDIGAVFGIGFPPF 658
>gi|119826|sp|P28793.1|FADB_PSEFR RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|51248014|pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
gi|51248015|pdb|1WDK|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
gi|51248018|pdb|1WDL|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
gi|51248019|pdb|1WDL|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
gi|51248022|pdb|1WDM|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
gi|51248023|pdb|1WDM|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
gi|90109186|pdb|2D3T|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
gi|90109187|pdb|2D3T|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
gi|391839|dbj|BAA01227.1| alpha-subunit of HDT [Pseudomonas fragi]
Length = 715
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 254/509 (49%), Gaps = 19/509 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A + VDAVV ++L + A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
L+ +F + K V D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 ASNCLIGLFLNDQELKKKAKVYDK--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSDLAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I + E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY Y+ +K KK ++ + I + ++++DI+ + P+ E
Sbjct: 584 KNGKGFYAYEADKKGKQ----KKLVDSSVLEVLKPIVYEQRDVTDEDIINWMMIPLCLET 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI AA+ D+ V G+GFP +R
Sbjct: 640 VRCLEDGIVETAAEADMGLVYGIGFPLFR 668
>gi|50083601|ref|YP_045111.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter sp. ADP1]
gi|81613376|sp|Q6FF68.1|FADB_ACIAD RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|49529577|emb|CAG67289.1| fatty oxidation complex alpha subunit [Includes: Enoyl-CoA
hydratase ; Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase ; 3-hydroxyacyl-CoA dehydrogenase;
3-hydroxybutyryl-CoA epimerase] [Acinetobacter sp. ADP1]
Length = 717
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 161/496 (32%), Positives = 252/496 (50%), Gaps = 17/496 (3%)
Query: 17 GLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEP--LGEAREIFKFARAQ-- 72
G VDAVV+ ++L A L R W A + +K+ P L ++ F A+
Sbjct: 183 GAVDAVVSADKLQEAAIDLVKQALAGRVDWKAK--RQEKLNPVKLNPLEQMMAFNTAKGA 240
Query: 73 --ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRG 130
A+ P + +D ++AG G L+ E E F K + ++L+ +F +
Sbjct: 241 VLAKANPAQYPAPKLMLDSLQAGASLGRDEALKVETEGFAKAAITPQAEALIGLFLNDQI 300
Query: 131 TSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRV 190
K + G P V + A+LG G+MG GIA P+I+K++ L G+
Sbjct: 301 IKKTSKKHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKDIGNPQLALGMQEA 358
Query: 191 RANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEK 250
L +V++ K+T K +T++ + L Y+ FK+VD+VIEA+ EN +K+ + AD E
Sbjct: 359 NGLLTKQVERKKLTPAKMGETLARIRPTLSYDEFKEVDIVIEAVTENPKIKEAVLADTEA 418
Query: 251 YCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVD 310
+ I+ASNTSTI + + + + VG HFF+P H+MPL+E++R QTS + +
Sbjct: 419 KVRDNTIIASNTSTISITRLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEQTSEEAVAT 478
Query: 311 LLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGP 370
+ + +K+ KTPIVV +C GF VNR+ FPY A LL++ G D ID+ + KFG PMGP
Sbjct: 479 TVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLLKDGADFQQIDKVMEKFGWPMGP 538
Query: 371 FRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETTRKGFYLYDERR 427
L D+VG + E FP+R YK I M E KR G+ GFY Y+ +
Sbjct: 539 AYLMDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IQTMYEAKRLGQKNDVGFYKYELDK 597
Query: 428 KASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAA 487
K + K A + + + + ++I++ + + NE R + I A
Sbjct: 598 KGK---KAKTVDSTAYEVIAPVVTSEKREFDAQEIIDRMMLALCNETVRCLEDNIVATPA 654
Query: 488 DLDIASVMGMGFPPYR 503
+ D+A +MG+GFPP+R
Sbjct: 655 EADMAMIMGIGFPPFR 670
>gi|294649051|ref|ZP_06726497.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter haemolyticus ATCC 19194]
gi|292825082|gb|EFF83839.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter haemolyticus ATCC 19194]
Length = 717
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 258/514 (50%), Gaps = 23/514 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLY-KTD--KIEP 58
M + P K A G VDAVVA ++L A + R W A K D K+ P
Sbjct: 168 MAMANPKKPAAALKDGAVDAVVAADKLQEAAVDLVKQAIAGRLNWKAKRQEKLDAIKLNP 227
Query: 59 LGEAREIFKFARAQ--ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
L E F A+ A+ P + +D ++AG S L+ EA+ F K +
Sbjct: 228 L-EQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASSTRDDALKAEAQGFAKAAITP 286
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+L+ +F + K + G P V + A+LG G+MG GIA P+I+K
Sbjct: 287 QAGALIGLFINDQVVKKTAKKYEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMK 344
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ L G+ L +V++ KM + +T++ + L Y+ FK+VD+VIEA+ E
Sbjct: 345 DIGNPQLALGMKEANGLLTKQVERKKMKPAQMGETLARIRPTLSYDEFKEVDIVIEAVTE 404
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K+ + AD EK+ + I+ASNTSTI + + + + VG HFF+P H+MPL+E
Sbjct: 405 NPKVKEIVLADTEKHVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVE 464
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D
Sbjct: 465 VIRGEKTSDEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQ 524
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAG 413
+D + KFG PMGP L D+VG + E FP+R YK I M E KR G
Sbjct: 525 VDNVMAKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IEAMYEAKRLG 583
Query: 414 ETTRKGFYLY--DERRKASP--DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+ GFY Y D++ K + DP + I + DP ++I++ +
Sbjct: 584 QKNDVGFYKYVLDKKGKKAKTVDPTAYEIIAPFVTGEKREFDP-------QEIIDRMMLA 636
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE R + I A++ D+A +MG+GFPP+R
Sbjct: 637 FCNETVRCLEDNIVATASEADMAMIMGVGFPPFR 670
>gi|255321280|ref|ZP_05362445.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
radioresistens SK82]
gi|262379980|ref|ZP_06073135.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
radioresistens SH164]
gi|255301656|gb|EET80908.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
radioresistens SK82]
gi|262298174|gb|EEY86088.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
radioresistens SH164]
Length = 716
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 250/500 (50%), Gaps = 25/500 (5%)
Query: 17 GLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEP--LGEAREIFKFARAQ-- 72
G VDAVV+ ++L A + R W + +K++P L ++ F A+
Sbjct: 182 GAVDAVVSADKLKDAAVDLVKQAIHGRLDW--KTKRQEKLDPVKLSPLEQMMAFNTAKGA 239
Query: 73 --ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRG 130
A+ P + +D ++AG L+ EAE F K + +L+ +F +
Sbjct: 240 VLAKANPAQYPAPKLLLDSLQAGASLHRDEALKAEAEGFAKAAITPQAGALIGLFLNDQV 299
Query: 131 TSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRV 190
K + G P V + A+LG G+MG GIA P+I+K++ L G+
Sbjct: 300 VKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKDIGNPQLALGMTEA 357
Query: 191 RANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEK 250
L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN +K+ + AD EK
Sbjct: 358 NKLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTENPRIKEAVLADTEK 417
Query: 251 YCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVD 310
+ I+ASNTSTI + + + + VG HFF+P H+MPL+E++R +TS + I
Sbjct: 418 SVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIAT 477
Query: 311 LLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGP 370
+ + +K+ KTPIVV +C GF VNR+ FPY A LL++ G D ID+ + KFG PMGP
Sbjct: 478 TVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLLKDGADFQQIDKVMEKFGWPMGP 537
Query: 371 FRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETTRKGFYLYDERR 427
L D+VG + E FP+R YK I M E KR G+ GFY Y+ R
Sbjct: 538 AYLMDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IQTMYEAKRLGQKNDVGFYKYELDR 596
Query: 428 KA----SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIA 483
K + DP I S DP ++I++ + NE R + I
Sbjct: 597 KGKKAKTVDPTAYDVIAPVVSGEKREFDP-------QEIIDRMMLAFCNETVRCLEDNIV 649
Query: 484 VKAADLDIASVMGMGFPPYR 503
A+ D+A +MG+GFPP+R
Sbjct: 650 ATPAEADMAMIMGVGFPPFR 669
>gi|312882081|ref|ZP_07741831.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309370217|gb|EFP97719.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 707
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/508 (30%), Positives = 263/508 (51%), Gaps = 23/508 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++LT K ++ ++A LG+VDAVV L+ A+ + + K I G
Sbjct: 168 LILTGKQLRAKKAKKLGIVDAVVPETILLEVAKSFVEKNTGKNKAKQKVSTKEKLIANTG 227
Query: 61 EAREIFKFARAQAR---KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
R++ F +A + K N ++V+ G+ G G +KEA+ F +L+ +
Sbjct: 228 LGRKVI-FEQATKKTHEKTRGNYPAADAILEVIRFGLEKGFEQGQKKEAQRFGELVMTPE 286
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLG--LAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
K+L IFFA K DLG +P ++++ A+LGGGLMG+GI+ ++ + PV
Sbjct: 287 SKALRSIFFATTEMKK-----DLGSEASPTKIERAAVLGGGLMGAGISHVSVAKAKVPVR 341
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+V+ + + + + K+ +++ + + + L+G +D+ FK D+VIEA+
Sbjct: 342 IKDVSNDGVLNAMQYNYKLFEKQKKRRIISKAQLQSQMLQLSGGVDFTRFKHTDIVIEAV 401
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++ LKQ + +D+E+ P I A+NTS++ + I E+ + +VG H+FSP MPL
Sbjct: 402 FEDLELKQTMVSDVEQNAKPTAIFATNTSSLPIKQIAEKAARPENVVGLHYFSPVEKMPL 461
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+E++ TS + + +++ +K KTPIVV +C GF VNR+ PY A ++ +
Sbjct: 462 VEVIPHEGTSAETVATVVEFARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMANEPI 521
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
+D+A+ FG P+GP L D VG + + ER + + D R G
Sbjct: 522 ESLDKALLNFGFPVGPITLLDEVGVDIGAKIIPILVNELGERFKGPDVFDKLLNDNRKGR 581
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
+ KGFY Y ++K EV K + K + ++P+ AK SEKD+ P++NEA
Sbjct: 582 KSGKGFYTYKGKKK-----EVDKSVYKL-----LGLNPE-AKQSEKDMALRCVLPMLNEA 630
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPY 502
R EGI D DI ++ G+GFPP+
Sbjct: 631 VRCLDEGIIRSPRDGDIGAIFGIGFPPF 658
>gi|12836375|dbj|BAB23628.1| unnamed protein product [Mus musculus]
Length = 718
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 256/516 (49%), Gaps = 28/516 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + + + +EA LG++D VV + V A ++A ++ +P + L
Sbjct: 149 LITSGRHISTDEALKLGILDVVVKSDP-VEEAIKFAQTVIG--KPIEPRRILNKPVPSLP 205
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+F A A+ RKQ P P C+ V+A V +++EA+ F L S ++
Sbjct: 206 NMDSVFAEAIAKVRKQYPGRLAPETCVRSVQASVKHPYEVAIKEEAKLFMYLRGSGQARA 265
Query: 121 LVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L + FFA++ +K G + + + V V +LG G MG GIA + PV+ E
Sbjct: 266 LQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGIPVVAVE 325
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ K L+ + + L+ K K S T + VD+VIEA+ E+
Sbjct: 326 SDPKQLDTAKKIITSTLEKEASKSGQASAKPNLRFSSST-----KELSSVDLVIEAVFED 380
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK+++FA+L C P L +NTS +D++ I T ++G HFFSPAH+M LLE+
Sbjct: 381 MNLKKKVFAELSALCKPGAFLCTNTSALDVDDIASSTDRPQLVIGTHFFSPAHIMRLLEV 440
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ + +SP I ++ + K+I K +VVGNC GF NRM PY + L+E G+ +
Sbjct: 441 IPSRYSSPTTIATVMSLSKRIGKIGVVVGNCYGFVGNRMLAPYYNQGYFLIEEGSKPEGV 500
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER----TYKSMIIPIM 406
D + +FG MGPFR++DL G V TG P R T S I ++
Sbjct: 501 DGVLEEFGFRMGPFRVSDLAGLDVGWKVRKGQGLTGPSLPPGTPTRKRGNTRYSPIADML 560
Query: 407 QEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVE 464
E R G+ T KG+Y YD+ R PDP + +F+ + R + K +S+++I+E
Sbjct: 561 CEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSEFLSQYRETHHI----KQRSISKEEILE 616
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFP 500
+ ++NEA R+ EG+A +D+ + G G+P
Sbjct: 617 RCLYSLINEAFRILEEGMAASPEHIDVIYLHGYGWP 652
>gi|410616276|ref|ZP_11327268.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola polaris LMG 21857]
gi|410163985|dbj|GAC31406.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola polaris LMG 21857]
Length = 716
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 168/505 (33%), Positives = 262/505 (51%), Gaps = 15/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKT-DKIEPL 59
MMLT V+ ++A G+VD +V + L+ A + A R+P + T + P+
Sbjct: 175 MMLTGVSVRAKQAKKYGIVDDMVPRSILLDVAIEMAKKPKPTRKPVKLDVMGTFLERTPM 234
Query: 60 GEAREIFKFARAQAR-KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
G + +FK AR Q + K N P ID +E G+ G + G+ EA+ F L+ +
Sbjct: 235 GR-KLMFKQARKQTQAKTLGNYPSPERIIDCIETGLEKGIQQGMALEAKHFGHLVMTPES 293
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
+L +FFA K G+ G+AP+++KK+ +LGGGLMG GIA +N P +K+
Sbjct: 294 AALRSLFFATTEMKKEHGIE--GVAPKKLKKIGVLGGGLMGGGIAFVTATKANLPARIKD 351
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + + L +VK+ M +K +S LTG +DY F + D+VIEA+ E+
Sbjct: 352 IRSDGIAHAMQYSYDILNKKVKRRFMLHSDMQKQLSRLTGAIDYVGFDNTDVVIEAVFED 411
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ LKQ + AD+E++C H I ASNTS+I + I + ++G H+FSP MPL E+
Sbjct: 412 LGLKQNMVADVEEHCAQHTIFASNTSSIPIAQIAANAQRPENVIGLHYFSPVDKMPLAEV 471
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS + I +++ KK KTPIVV + GF VNR+ PY + ++ G + I
Sbjct: 472 IAHEGTSDETISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLSGEPIDQI 531
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP +L D VG V + F ER + + D R G+ +
Sbjct: 532 DKALVKFGFPVGPIKLLDEVGIDVGTKISPILVAQFGERFNSAPGFDKLLADDRKGKKNK 591
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
+GFY Y+ ++ K E + GV + ++LS+ I E ++NEA
Sbjct: 592 RGFYNYEGKKPG------KDVDESVYDLLGVTPN---SRLSDNTIAERCVLLMLNEAAMC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EG+ A D DI ++ G+GFPP+
Sbjct: 643 LDEGVVRCARDGDIGAIFGIGFPPF 667
>gi|410639327|ref|ZP_11349876.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
gi|410141115|dbj|GAC08063.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
Length = 716
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 171/505 (33%), Positives = 261/505 (51%), Gaps = 15/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLY-KTDKIEPL 59
MMLT V+ ++A G+VD +V + L+ A + A R+P L + + P+
Sbjct: 175 MMLTGSAVRAKQAKKYGIVDDMVPRSILLDVAIEMAKKSKPKRKPVKLDLMGQFLERTPM 234
Query: 60 GEAREIFKFARAQAR-KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
G+ + +FK AR Q + K N P ID +E G+ G G EA+ F L+ +
Sbjct: 235 GK-KLMFKQARKQTQAKTLGNYPSPERIIDCIETGLEKGNAQGYALEAQHFGHLVMTPES 293
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
+L +FFA K GV G+AP +KK+ +LGGGLMG GIA + PV +K+
Sbjct: 294 AALRSLFFATTEMKKENGVE--GVAPNALKKIGVLGGGLMGGGIAFVTATKAKLPVRIKD 351
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + + L +VK+ M + + +S LTG +DY F + D+VIEA+ E+
Sbjct: 352 IRSDGIAHAMKYSYDILSKKVKRRFMLHSQMQSQLSRLTGSVDYVGFDNTDVVIEAVFED 411
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQ + D+E +C H I ASNTS+I + I + ++G H+FSP MPL E+
Sbjct: 412 LALKQNMVTDVETHCSEHTIFASNTSSIPIGQIAANAKRPENVIGLHYFSPVDKMPLAEV 471
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS Q I +++ KK KTPIVV + GF VNR+ PY + ++ G + I
Sbjct: 472 IAHEGTSDQTISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLAGEPIEQI 531
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+ KFG P+GP +L D VG V + F ER + + D R G+ +
Sbjct: 532 DRALVKFGFPVGPIKLLDEVGIDVGTKISPILVAEFGERFSSAPGFDKLLADDRKGKKNK 591
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
+GFY Y+ ++ P EV + + ++I P ++LSE I E ++NEA
Sbjct: 592 RGFYNYEGKK---PGKEVDESVYDL-----LSITPS-SRLSESTIAERCVLLMLNEAAMC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EG+ A D DI ++ G+GFPP+
Sbjct: 643 LDEGVVRSARDGDIGAIFGIGFPPF 667
>gi|365855359|ref|ZP_09395413.1| putative noyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase
[Acetobacteraceae bacterium AT-5844]
gi|363719281|gb|EHM02591.1| putative noyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase
[Acetobacteraceae bacterium AT-5844]
Length = 698
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 224/403 (55%), Gaps = 7/403 (1%)
Query: 101 GLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGS 160
GL++E E F L S +L H+F A+R +VPG+ G++PR VK+VA++GGG MGS
Sbjct: 246 GLKRERETFLPLRDSAEAAALRHLFLAEREAGRVPGLE--GVSPREVKRVAVIGGGTMGS 303
Query: 161 GIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLD 220
GIA A+ + PV + E + + EA R+R +VK G++T+ + ++L+T V D
Sbjct: 304 GIAIAVADAGLPVQVLERDAEAAEACAARLRDTYGKQVKSGRLTEAAAAERLALITPVHD 363
Query: 221 YESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRI 280
+ +VD++IEA E + +K IF+ L+K P +LA+NTS +D + I T +
Sbjct: 364 WSLLAEVDLIIEAAFEEMGVKADIFSRLDKVAKPGAVLATNTSYLDPDAIAGFTSRPQDV 423
Query: 281 VGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPY 340
+G HFF+PA+VM LLE+VR +T+P V+ L GKK+ K PIV G C GF NR++ Y
Sbjct: 424 LGLHFFAPANVMKLLEVVRCAKTAPDVLATGLAFGKKLGKLPIVSGVCEGFIGNRIYAVY 483
Query: 341 TQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS 400
+ A LV G +D A+ FG MG F ++D+ G +A A +
Sbjct: 484 RRHAEYLVADGASPREVDAALEAFGFAMGIFAVSDMSGLDIAWAMRKRRAATRDPAERYV 543
Query: 401 MIIPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEK 460
I + E R G T G+Y Y KA PDP V I + R+ +G I P+ S++
Sbjct: 544 TIADKLCEAGRLGRKTGAGWYDY-ASGKAQPDPVVDAVIAEERAAAG--ITPR--TFSQQ 598
Query: 461 DIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
DI + + NEA ++ AEGIA++ +D+D+ G GFP R
Sbjct: 599 DIQNRLLAVMANEAAKIVAEGIALRPSDIDLVFTNGYGFPRLR 641
>gi|421495832|ref|ZP_15943086.1| Fatty oxidation complex subunit alpha [Aeromonas media WS]
gi|407185171|gb|EKE58974.1| Fatty oxidation complex subunit alpha [Aeromonas media WS]
Length = 716
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 184/523 (35%), Positives = 267/523 (51%), Gaps = 42/523 (8%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT K V+ ++A LGLVD VV P+ L+ + A+ + + +P T K + G
Sbjct: 167 LMLTGKQVRAKQAKKLGLVDDVVPPSILL----EAAIKLAKKGKPR-----HTLKRDLQG 217
Query: 61 EAREIFKFARA----QARKQAP-----NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQK 111
+ E R QARK N P ++VV GV G +AGL E+ F +
Sbjct: 218 KVLETNALGRKVLFDQARKGVKAKTRGNYPAPERILEVVRIGVEEGMQAGLAAESRHFGE 277
Query: 112 LLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSN 170
L+ + +L IFFA K V+ G PR+V A+LGGGLMG GIA +
Sbjct: 278 LVMTAESAALRSIFFATTEMKKE--VSYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKAG 335
Query: 171 YPVILKEVNEKFLEAGIGRVRAN----LQSRVKKGKMTQEKFEKTISLLTGVLDYESFKD 226
PV +K+V AGIG L ++K+ ++ + + EK +SLLTG LDY F
Sbjct: 336 VPVRIKDVGS----AGIGNAMRYSYDLLAKKLKRRQLLRSELEKQMSLLTGTLDYAGFHR 391
Query: 227 VDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFF 286
VDMV+EA+ E+++LK Q+ AD+E+ C H + ASNTS++ ++ I +R+VG H+F
Sbjct: 392 VDMVVEAVFEDLALKHQMVADVERECGEHTVFASNTSSLPIHQIAANAAHPERVVGLHYF 451
Query: 287 SPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFL 346
SP MPL EI+ TSP+ + L + KTPIVV + GF VNR+ PY A
Sbjct: 452 SPVDKMPLAEIIPHAGTSPETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAAR 511
Query: 347 LVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS-MIIPI 405
LV G + ++D A+ FG P+GP L D VG V + +++
Sbjct: 512 LVLEGEPVEVLDSALLDFGFPVGPITLLDEVGIDVGAKISPILEKELGGEQFQAPKAFDK 571
Query: 406 MQEDKRAGETTRKGFYLYDERRKASP-----DPEVKKFI-EKARSMSGVAIDPKFAKLSE 459
+ +D R G KGFYLY KA+P E KK + E ++ GV + PK A+
Sbjct: 572 LLQDDRKGRKNGKGFYLYG---KAAPRNRLTGKEGKKTVDESVYAVLGVKVSPKLAR--- 625
Query: 460 KDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++I E ++NEA G+ A D DI ++ G+GFPP+
Sbjct: 626 QEIAERCVLLMLNEAAMALDSGVVASARDGDIGAIFGIGFPPF 668
>gi|85711011|ref|ZP_01042072.1| Fatty acid oxidation complex alpha subunit [Idiomarina baltica
OS145]
gi|85695415|gb|EAQ33352.1| Fatty acid oxidation complex alpha subunit [Idiomarina baltica
OS145]
Length = 718
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 260/518 (50%), Gaps = 33/518 (6%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL-- 59
+ T K +A +G VDAVV P+ L A A + W A + K+EPL
Sbjct: 166 ITTGKNNSALDALKVGAVDAVVEPDNLTEAALNLAKAAAAGEQDWKAK--RQPKLEPLKA 223
Query: 60 GEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
+ A+ A K + P I+ +E G L E + F L +++
Sbjct: 224 NDTELTMTLVTAKGMVAAKAGKHYPAPHKAIEAIENGAREAREGALNAENQAFFDLTQTD 283
Query: 117 TCKSLVHIFFAQ---RGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
C + V IF A +G SK + A + + A+LG G+MG GIA L P
Sbjct: 284 ACHAQVGIFLADQAVKGKSKKYAKS----ASKEINTAAVLGAGIMGGGIAYQSALKGVPA 339
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
++K++ + L+ G+ L+ V++GK++ EK K +S +T L ++ KDVD+V+EA
Sbjct: 340 VMKDIKQDALDLGMKEAGKILKKGVERGKVSSEKMIKVLSSITPTLLNDAVKDVDIVVEA 399
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
++EN +K + A++E IL SNTSTI + + + ++ G HFF+P H MP
Sbjct: 400 VVENPKVKGSVLAEVEGVISDDAILTSNTSTISITELAKNLKRPEKFCGMHFFNPVHKMP 459
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+EI+R +TS + + ++ K+ KTPIVV +C GF VNR+ FPY +V+ G D
Sbjct: 460 LVEIIRGEKTSDETVAAVVAYALKLGKTPIVVNDCPGFYVNRVLFPYLAGFAGMVDEGID 519
Query: 354 LYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK--SMIIPIMQEDK 410
ID+ + K FG PMGP L+D+VG A + + FP R + S I + + +
Sbjct: 520 FVGIDKVMEKMFGWPMGPAYLSDVVGIDTADHCTVVMADGFPSRMARNESSAIAQLAKAE 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKD-IVEM 465
R G+ KGFY+Y +K P DPE K I +P K ++KD ++
Sbjct: 580 RYGQKNGKGFYVYGTDKKGKPTKEADPETYKLI---------GAEP--GKQADKDEVIAR 628
Query: 466 IFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
P+VNE R EGI AA+ DIA + G+GFPP+R
Sbjct: 629 CMIPMVNEVVRCLEEGIIGSAAEADIALLYGLGFPPFR 666
>gi|402758968|ref|ZP_10861224.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter sp. NCTC 7422]
Length = 717
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 174/514 (33%), Positives = 262/514 (50%), Gaps = 23/514 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLY-KTD--KIEP 58
M + P K A G VDAVVA ++L+ A L R W A K D K+ P
Sbjct: 168 MAMANPKKPAAALKDGAVDAVVAADKLLEAAVDLVKQALAGRLNWKAKRQEKLDAIKLNP 227
Query: 59 LGEAREIFKFARAQ--ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
L E F A+ A+ P + +D ++AG S L+ EA+ F K +
Sbjct: 228 L-EQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGANSTRDDALKAEAQGFAKAAITP 286
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+L+ +F + K + G P V + A+LG G+MG GIA P+I+K
Sbjct: 287 QAGALIGLFINDQVVKKTAKKYEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMK 344
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ L G+ L +V++ KM + +T++ + L Y+ FK+VD+VIEA+ E
Sbjct: 345 DIGNPQLALGMQEANNLLTKQVERKKMKPAQMGETLARIRPTLSYDEFKEVDIVIEAVTE 404
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K+ + AD EK+ + I+ASNTSTI + + + + VG HFF+P H+MPL+E
Sbjct: 405 NPKVKEIVLADTEKHVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVE 464
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D
Sbjct: 465 VIRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQ 524
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAG 413
+D + KFG PMGP L D+VG + E FP+R YK I M E KR G
Sbjct: 525 VDNVMAKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IEAMYEAKRLG 583
Query: 414 ETTRKGFYLY--DERRKASP--DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+ GFY Y D++ K + DP + I A ++G + + ++I++ +
Sbjct: 584 QKNDVGFYKYVLDKKGKKTKTVDPTAYEII--APFVTG-----EKREFDSQEIIDRMMLA 636
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE R + I AA+ D+A +MG+GFPP+R
Sbjct: 637 FCNETVRCLEDKIVATAAEADMAMIMGVGFPPFR 670
>gi|254506914|ref|ZP_05119053.1| fatty oxidation complex, alpha subunit FadJ [Vibrio
parahaemolyticus 16]
gi|219550199|gb|EED27185.1| fatty oxidation complex, alpha subunit FadJ [Vibrio
parahaemolyticus 16]
Length = 707
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/505 (30%), Positives = 260/505 (51%), Gaps = 17/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++LT K ++ ++A LG+VDAVV L+ A+ + + K I G
Sbjct: 168 LILTGKQLRAKKAKKLGVVDAVVPETILLDVAKSFVEKNAGKSKGKRKVSTKEKLISNTG 227
Query: 61 EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R++ + A+ K N ++V+ G+ G G +KEAE F +L+ +
Sbjct: 228 LGRKVIFDQAAKKTFEKTRGNYPAADAILEVIRYGLEKGFEQGQKKEAERFAELVMTSES 287
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
K+L IFFA K G P VK+ A+LGGGLMG+GI+ ++ + PV +K+
Sbjct: 288 KALRSIFFATTEMKKENGSD---AEPLSVKRAAVLGGGLMGAGISHVSVAKAKVPVRIKD 344
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
V+E + + +++ K+ +++ + + + L+G D+ SF D+VIEA+ E+
Sbjct: 345 VSEDGVLNALKYNYKLFETQRKRRIISKAQLQSKMLQLSGGTDFTSFNHTDIVIEAVFED 404
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ LKQ++ AD+E+ I A+NTS++ + I E+ + +VG H+FSP MPL+E+
Sbjct: 405 LDLKQKMVADIEENAKDSTIFATNTSSLPIGQIAEKAQRPENVVGLHYFSPVEKMPLVEV 464
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS + + +++ +K KTPIVV +C GF VNR+ PY A ++ G + +
Sbjct: 465 IPHEGTSDETVSTVVEFARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMSGEPIGHL 524
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ FG P+GP L D VG + + ER + + D R G +
Sbjct: 525 DKALLNFGFPVGPITLLDEVGVDIGAKIMPILVNELGERFKGPDVFDTLLNDGRKGRKSG 584
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
KGFY Y ++K EV K + K +S P+ +K++++++ P++NEA R
Sbjct: 585 KGFYTYKGKKK-----EVDKSVYKLLGLS-----PE-SKMAQEEMAMRCVLPMLNEAVRC 633
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EGI D DI ++ G+GFPP+
Sbjct: 634 LDEGIIRSPRDGDIGAIFGIGFPPF 658
>gi|31541815|ref|NP_076226.2| peroxisomal bifunctional enzyme [Mus musculus]
gi|341940646|sp|Q9DBM2.4|ECHP_MOUSE RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|16877282|gb|AAH16899.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Mus musculus]
gi|148665191|gb|EDK97607.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Mus musculus]
Length = 718
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 256/516 (49%), Gaps = 28/516 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + + + +EA LG++D VV + V A ++A ++ +P + L
Sbjct: 149 LITSGRHISTDEALKLGILDVVVKSDP-VEEAIKFAQTVIG--KPIEPRRILNKPVPSLP 205
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+F A A+ RKQ P P C+ V+A V +++EA+ F L S ++
Sbjct: 206 NMDSVFAEAIAKVRKQYPGRLAPETCVRSVQASVKHPYEVAIKEEAKLFMYLRGSGQARA 265
Query: 121 LVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L + FFA++ +K G + + + V V +LG G MG GIA + PV+ E
Sbjct: 266 LQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGIPVVAVE 325
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ K L+ + + L+ K K S T + VD+VIEA+ E+
Sbjct: 326 SDPKQLDTAKKIITSTLEKEASKSGQASAKPNLRFSSST-----KELSSVDLVIEAVFED 380
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK+++FA+L C P L +NTS +D++ I T ++G HFFSPAH+M LLE+
Sbjct: 381 MNLKKKVFAELSALCKPGAFLCTNTSALDVDDIASSTDRPQLVIGTHFFSPAHIMRLLEV 440
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ + +SP I ++ + K+I K +VVGNC GF NRM PY + L+E G+ +
Sbjct: 441 IPSRYSSPTTIATVMSLSKRIGKIGVVVGNCYGFVGNRMLAPYYNQGYFLIEEGSKPEDV 500
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER----TYKSMIIPIM 406
D + +FG MGPFR++DL G V TG P R T S I ++
Sbjct: 501 DGVLEEFGFRMGPFRVSDLAGLDVGWKVRKGQGLTGPSLPPGTPTRKRGNTRYSPIADML 560
Query: 407 QEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVE 464
E R G+ T KG+Y YD+ R PDP + +F+ + R + K +S+++I+E
Sbjct: 561 CEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSEFLSQYRETHHI----KQRSISKEEILE 616
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFP 500
+ ++NEA R+ EG+A +D+ + G G+P
Sbjct: 617 RCLYSLINEAFRILEEGMAASPEHIDVIYLHGYGWP 652
>gi|154244865|ref|YP_001415823.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Xanthobacter
autotrophicus Py2]
gi|154158950|gb|ABS66166.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Xanthobacter
autotrophicus Py2]
Length = 686
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 174/529 (32%), Positives = 259/529 (48%), Gaps = 42/529 (7%)
Query: 8 VKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFK 67
+ EA +GL+DA+ A V+ AR + + RP L EA
Sbjct: 158 INAHEAEDIGLMDAIAA--DPVTVARTFPIP----DRPATGALPAPPPDPAGVEA----- 206
Query: 68 FARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFA 127
AR QA K++P P+ ID+V+A AGL E E F L S+ +L H+FFA
Sbjct: 207 -ARKQAGKRSPGQIAPLKAIDLVDASTRQSLDAGLALERETFLTLKTSDQAAALRHVFFA 265
Query: 128 QRGT--SKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEA 185
+R G TD+G A ++GGG MG+GIA AL V L E + A
Sbjct: 266 ERAAMAQGKGGGTDIGSA-------VVVGGGTMGAGIAYALAGLGIAVALVESDA----A 314
Query: 186 GIGRVRANLQ----SRVKKGKMTQEKFE-KTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
G+GR RAN+ VK+GK T E + + + Y + D+ IEA+ E++ +
Sbjct: 315 GVGRARANVARLYADAVKRGKTTAGAAEAEQATRFSFHEGYGALPPADLAIEAVFEDMGV 374
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+++F L+ P ILA+NTS +D+N I E +R +G HFFSPAHVM LLE++R
Sbjct: 375 KREVFTALDAALPESTILATNTSYLDVNRIAEAVRRPERFLGLHFFSPAHVMKLLEVIRA 434
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TS + + L + ++KK PI+ G C GF NR+ Y Q +++ G +DRA
Sbjct: 435 RTTSAETLATALRLAARLKKIPILAGVCDGFIGNRILTRYRQTCDIMLMEGALPAQVDRA 494
Query: 361 ITKFGMPMGPFRLADLVGFGVAIAT----GMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
+ FGM MGP+ + DL G +A A G + + F Y + +++E R G T
Sbjct: 495 LRGFGMAMGPYEVQDLSGLDIAYANRKRLGWRTKDGF---RYIPIADRVVEETGRLGRKT 551
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
G+Y YD KASP + + + + +G+A S+++IV +V E R
Sbjct: 552 GAGWYDYDG-GKASPSTLIDRIVVEEAVRAGIA----RRAFSDEEIVARAISSMVEEGFR 606
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCY 525
+ EGIA +AAD+D+ + G FP +R H G S + + +
Sbjct: 607 ILEEGIAARAADIDLVMIHGYAFPRWRGGPMHHAGRVGLSEIVRRIEAF 655
>gi|423206560|ref|ZP_17193116.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AMC34]
gi|404622112|gb|EKB18977.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AMC34]
Length = 716
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 189/517 (36%), Positives = 266/517 (51%), Gaps = 32/517 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALD---ILEHRRPWVATLYKTDKIE 57
+MLT K V+ ++A LGLVD VV P+ L+ A + A E +R L +T+K
Sbjct: 167 LMLTGKQVRAKQAKKLGLVDDVVPPSILLDAAIKLAKKGKPRHELKRDLQGKLLETNK-- 224
Query: 58 PLGEAREIFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
LG + +F AR K N P +DVV GV G +AGL E+ F +L+ +
Sbjct: 225 -LGR-KVLFDQARKGVMSKTRGNYPAPERILDVVRIGVEEGMQAGLAAESRHFGELVMTA 282
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVIL 175
+L IFFA K VT G PR+V A+LGGGLMG GIA + PV +
Sbjct: 283 ESAALRSIFFATTEMKKE--VTYQGAEPRKVGHAAVLGGGLMGGGIAFVTATKAGVPVRI 340
Query: 176 KEVNEKFLEAGIGRVRAN----LQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVI 231
K+V AGIG L ++K+ + + + EK +SLLTG LDY F VDMV+
Sbjct: 341 KDVAS----AGIGNAMRYSYDILAKKLKRRHILRSELEKQMSLLTGTLDYSGFHRVDMVV 396
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHV 291
EA+ E+++LK Q+ D+E+ C H + ASNTS++ +N I +R+VG H+FSP
Sbjct: 397 EAVFEDLALKHQMVKDVERECGEHTVFASNTSSLPINQIAAEAAHPERVVGLHYFSPVDK 456
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
MPL EI+ TS + + L + KTPIVV + GF VNR+ PY A LV G
Sbjct: 457 MPLAEIIPHAGTSAETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEG 516
Query: 352 TDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS-MIIPIMQEDK 410
+ ++D A+ FG P+GP L D VG V + +++ + +D
Sbjct: 517 EPVEVLDSALLDFGFPVGPITLLDEVGIDVGAKISPILEKELGGEQFQAPKAFDKLLQDD 576
Query: 411 RAGETTRKGFYLYDERRKASP-----DPEVKKFIEKARSMSGV-AIDPKFAKLSEKDIVE 464
R G KGFYLY KA+P E KK +++ S+ GV I P AKL+ ++I E
Sbjct: 577 RKGRKNGKGFYLYG---KAAPRNKLTGKEGKKTVDE--SVYGVLGIKPS-AKLARQEIAE 630
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPP 501
++NEA G+ A D DI ++ G+GFPP
Sbjct: 631 RCVLLMLNEAAMALDSGVVASARDGDIGAIFGIGFPP 667
>gi|226951804|ref|ZP_03822268.1| fatty oxidation complex alpha subunit [Acinetobacter sp. ATCC
27244]
gi|226837344|gb|EEH69727.1| fatty oxidation complex alpha subunit [Acinetobacter sp. ATCC
27244]
Length = 717
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 258/514 (50%), Gaps = 23/514 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLY-KTD--KIEP 58
M + P K A G VDAVVA ++L A + R W A K D K+ P
Sbjct: 168 MAMANPKKPAAALKDGAVDAVVAADKLQEAAIDLVKQAIAGRLNWKAKRQEKLDAIKLNP 227
Query: 59 LGEAREIFKFARAQ--ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
L E F A+ A+ P + +D ++AG S L+ EA+ F K +
Sbjct: 228 L-EQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASSTRDDALKAEAQGFAKAAITP 286
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+L+ +F + K + G P V + A+LG G+MG GIA P+I+K
Sbjct: 287 QAGALIGLFINDQVVKKTAKKYEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMK 344
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ L G+ L +V++ KM + +T++ + L Y+ FK+VD+VIEA+ E
Sbjct: 345 DIGNPQLALGMKEANGLLTKQVERKKMKPAQMGETLARIRPTLSYDEFKEVDIVIEAVTE 404
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K+ + AD EK+ + I+ASNTSTI + + + + VG HFF+P H+MPL+E
Sbjct: 405 NPKVKEIVLADTEKHVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVE 464
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D
Sbjct: 465 VIRGEKTSDEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQ 524
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAG 413
+D + KFG PMGP L D+VG + E FP+R YK I M E KR G
Sbjct: 525 VDNVMAKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IQAMYEAKRLG 583
Query: 414 ETTRKGFYLY--DERRKASP--DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+ GFY Y D++ K + DP + I + DP ++I++ +
Sbjct: 584 QKNDVGFYKYVLDKKGKKAKTVDPTAYEIIAPFVTGEKREFDP-------QEIIDRMMLA 636
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE R + I A++ D+A +MG+GFPP+R
Sbjct: 637 FCNETVRCLEDNIVATASEADMAMIMGVGFPPFR 670
>gi|407698777|ref|YP_006823564.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Black Sea 11']
gi|407247924|gb|AFT77109.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Black Sea 11']
Length = 716
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 171/510 (33%), Positives = 255/510 (50%), Gaps = 15/510 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M T + KG +A + G VDAVVAP LV A D E + W A L +
Sbjct: 167 MTTGRDRKGAKALAEGAVDAVVAPEALVEGALSMVKDAAEGKFDWQARRAVKKAPLQLNK 226
Query: 62 AREIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+ F+ AQA A H P ++ V+ L+ E E F L +++
Sbjct: 227 NEAMMSFSTAQAMVFAQAGKHYPAPHKMVETVQKAAGLDRDGALKLENEGFVALAKTDAA 286
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
K+ + IF A + K G + + K A+LG G+MG GIA + PVI+K++
Sbjct: 287 KAQIGIFLADQ-LVKSKGKKQAKASTKETKLNAVLGAGIMGGGIAYQSAVKGTPVIMKDI 345
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N+ L+ G+ L +++GK+ K +T++ +T L+Y + KD D+VIEA++EN
Sbjct: 346 NQGALDLGLSEAAKILGKGMQRGKVDAAKMAQTLNAITPTLEYSTLKDADLVIEAVVENP 405
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K + ++E+ I+ SNTSTI +N + E +R G HFF+P H MPL+EI+
Sbjct: 406 KVKGIVLKEVEENVADDAIICSNTSTISINQLAESLDKPERFCGMHFFNPVHRMPLVEII 465
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +TS + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D +D
Sbjct: 466 RGEKTSEETINAVVAATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLLIDGADFVAVD 525
Query: 359 RAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI--MQEDKRAGET 415
+ + K FG PMGP L D+VG PER + P+ +++R G+
Sbjct: 526 KVMEKIFGWPMGPAYLMDVVGIDTGDHAADVMAAGIPERMARLDNDPVTLFYKEQRLGQK 585
Query: 416 TRKGFYLY--DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY Y D+R K S P E+A ++ + K DI+ + P+ NE
Sbjct: 586 NGKGFYNYGVDKRGKPSKTPA-----EEAYALMAPHVAEK-TDFEADDIIARLMIPMANE 639
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
A R EGI AA+ D+A + G+GFPP+R
Sbjct: 640 AIRCLEEGIVDSAAEADMALLYGLGFPPFR 669
>gi|359428397|ref|ZP_09219432.1| fatty oxidation complex alpha subunit [Acinetobacter sp. NBRC
100985]
gi|358236182|dbj|GAB00971.1| fatty oxidation complex alpha subunit [Acinetobacter sp. NBRC
100985]
Length = 717
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 261/514 (50%), Gaps = 23/514 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLY-KTD--KIEP 58
M + P K A G VDAVVA ++L A L R W A K D K+ P
Sbjct: 168 MAMANPKKPAAALKDGAVDAVVAADKLQEAAVDLVKQALAGRLNWKAKRQEKLDAIKLNP 227
Query: 59 LGEAREIFKFARAQ--ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
L E F A+ A+ P + +D ++AG S L+ EA+ F K +
Sbjct: 228 L-EQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASSTRDDALKAEAQGFAKAAITP 286
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+L+ +F + K + G P V + A+LG G+MG GIA P+I+K
Sbjct: 287 QAGALIGLFINDQVVKKTAKKYEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMK 344
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ L G+ L +V++ KM + +T++ + L Y+ FK+VD+VIEA+ E
Sbjct: 345 DIGNPQLALGMKEANGLLTKQVERKKMKPAQMGETLARIRPTLSYDEFKEVDIVIEAVTE 404
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K+ + AD EK+ + I+ASNTSTI + + + + VG HFF+P H+MPL+E
Sbjct: 405 NPKVKEIVLADTEKHVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVE 464
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D
Sbjct: 465 VIRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQ 524
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAG 413
+D + KFG PMGP L D+VG + E FP+R YK I M E KR G
Sbjct: 525 VDNVMAKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IEAMYEAKRLG 583
Query: 414 ETTRKGFYLY--DERRKASP--DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+ GFY Y D++ K + DP + I A ++G + + ++I++ +
Sbjct: 584 QKNDVGFYKYVLDKKGKKAKTVDPTAYEII--APYVTG-----EKREFDNQEIIDRMMLA 636
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE R + I A++ D+A +MG+GFPP+R
Sbjct: 637 FCNETVRCLEDNIVATASEADMAMIMGVGFPPFR 670
>gi|406595449|ref|YP_006746579.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii ATCC 27126]
gi|406372770|gb|AFS36025.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii ATCC 27126]
Length = 716
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/510 (33%), Positives = 255/510 (50%), Gaps = 15/510 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M T + KG +A + G VDAVVAP LV A D + + W A L +
Sbjct: 167 MTTGRDRKGAKALAEGAVDAVVAPEALVEGALSMVKDAADGKFDWQARRAVKKAPLQLNK 226
Query: 62 AREIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+ F+ AQA A H P ++ V+ L+ E E F L +++
Sbjct: 227 NEAMMSFSTAQAMVFAQAGKHYPAPHKMVETVQKAAGLDREGALKLENEGFVALAKTDAA 286
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
K+ + IF A + K G A ++ K A+LG G+MG GIA + PVI+K++
Sbjct: 287 KAQIGIFLADQ-LVKSKGKKQAKAATKQSKLNAVLGAGIMGGGIAYQSAVKGTPVIMKDI 345
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N+ L+ G+ L +++GK+ K +T++ +T L+Y + KD D+VIEA++EN
Sbjct: 346 NQGALDLGLSEAAKILGKGMQRGKVDATKMAQTLNAITPTLEYSTLKDADLVIEAVVENP 405
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K + ++E I+ SNTSTI +N + E +R G HFF+P H MPL+EI+
Sbjct: 406 KVKGIVLKEVEDNVADDAIICSNTSTISINQLAESLDKPERFCGMHFFNPVHRMPLVEII 465
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +TS + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D +D
Sbjct: 466 RGEKTSEETINAVVAATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLLIDGADFVAVD 525
Query: 359 RAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI--MQEDKRAGET 415
+ + K FG PMGP L D+VG PER + P+ +++R G+
Sbjct: 526 KVMEKIFGWPMGPAYLMDVVGIDTGDHAADVMAAGIPERMARLDNDPVTLFYKEQRLGQK 585
Query: 416 TRKGFYLY--DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY Y D+R K S P E+A ++ + K DI+ + P+ NE
Sbjct: 586 NGKGFYNYGVDKRGKPSKTPA-----EEAYALMAPHVAEK-TDFEADDIIARLMIPMANE 639
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
A R EGI AA+ D+A + G+GFPP+R
Sbjct: 640 AIRCLEEGIVDSAAEADMALLYGLGFPPFR 669
>gi|323493352|ref|ZP_08098475.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
brasiliensis LMG 20546]
gi|323312438|gb|EGA65579.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
brasiliensis LMG 20546]
Length = 706
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/505 (30%), Positives = 258/505 (51%), Gaps = 17/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++LT K ++ ++A LG+ DAVV L+ A+ + + K I G
Sbjct: 168 LILTGKQLRAKKAKKLGVADAVVPQTVLLEVAKSFVEKHTGKSKAKRKASTKEKLIANTG 227
Query: 61 EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R++ + A+ K N ++V+ G+ G G +KEAE F +L+ +
Sbjct: 228 LGRKVIFDQAAKKTREKTRGNYPAADAILEVIRFGLEKGFEKGQKKEAERFGELVMTNES 287
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
K+L IFFA K G P+ +++ A+LGGGLMG+GI+ ++ + PV +K+
Sbjct: 288 KALRSIFFATTEMKKENGSY---ADPKALERAAVLGGGLMGAGISHVSVAKAKVPVRIKD 344
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
V+ + + + + K+ +++ + + + L+G D+ +F D+VIEA+ E+
Sbjct: 345 VSNDGVLNALKYNYKLFEKQRKRRILSKAQLQSKMLQLSGGTDFTTFNHTDIVIEAVFED 404
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ LKQQ+ AD+E+ I A+NTS++ ++ I E+ + +VG H+FSP MPL+E+
Sbjct: 405 LQLKQQMVADVEENAKDSTIFATNTSSLPIHQIAEKAARPENVVGLHYFSPVEKMPLVEV 464
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS + I +++ +K KTPIVV +C GF VNR+ PY A ++ G + +
Sbjct: 465 IPHEGTSAETISTVVEFARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLLTGEPIEQL 524
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D A+ FG P+GP L D VG + + ER + + D R G +
Sbjct: 525 DTALLNFGFPVGPITLLDEVGVDIGAKIMPILVNELGERFQGPDVFDKLLNDDRKGRKSG 584
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
KGFY Y ++K EV K + K + + P+ +KL+EKDI P++NEA R
Sbjct: 585 KGFYTYKGKKK-----EVDKSVYKL-----LGLTPE-SKLAEKDIAMRCVLPMLNEAVRC 633
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EGI D DI ++ G+GFPP+
Sbjct: 634 LDEGIIRSPRDGDIGAIFGIGFPPF 658
>gi|421495313|ref|ZP_15942601.1| Fatty acid oxidation complex subunit alpha [Aeromonas media WS]
gi|407185694|gb|EKE59463.1| Fatty acid oxidation complex subunit alpha [Aeromonas media WS]
Length = 715
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/511 (33%), Positives = 252/511 (49%), Gaps = 13/511 (2%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K V+ ++A +G +DAVVAP L S A Q D + + W + L +
Sbjct: 169 TGKDVRADDALKVGAIDAVVAPAALQSAAVQMMRDAIAGKLDWQSRRAAKKAPLRLSKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A A H P+ + VEA L EA+ F KL +++ K+
Sbjct: 229 AMMSFTTAAGMVAAVAGKHYPAPMTAVKTVEAAAGMSRDEALAVEAQGFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LV IF + + A + A+LG G+MG GIA P ++K++NE
Sbjct: 289 LVGIFLNDQHIKALAKKAAK-QAAKATSHAAVLGAGIMGGGIAYQSASKGIPAVMKDINE 347
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
K L G+G L +++KG++ K + +S +T L Y+S K VD+V+EA++EN +
Sbjct: 348 KALALGMGEATKLLNGQLEKGRIDGIKMGQVLSAITPTLSYDSVKHVDLVVEAVVENPKV 407
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K + ++E +LASNTSTI ++L+ + + G HFF+P H MPL+EI+R
Sbjct: 408 KAAVLGEVEGIIGEDAVLASNTSTIPISLLAKGLKRPENFCGMHFFNPVHRMPLVEIIRG 467
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
QTS I ++ + K+P+VV +C GF VNR+ FPY LV G D +D+
Sbjct: 468 EQTSDDTINRVVAYAAAMGKSPVVVNDCPGFFVNRVLFPYFFGFNKLVADGADFAAVDKV 527
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG G + FP R K I +M E R G+
Sbjct: 528 MEKEFGWPMGPAYLLDVVGIDTGHHAGDVLAQGFPARMSKEGRTAIDVMYEVSRFGQKNG 587
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD-IVEMIFFPVVNEACR 476
KGFY Y++ +K P K + A S +A K + +KD I+ + P++NE
Sbjct: 588 KGFYAYEQDKKGKP-----KKVADAASYELLAPIAKPKQEFDKDAIIARMMIPMINEVVL 642
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
EGI A+ DIA V G+GFPP+R F
Sbjct: 643 CLEEGIVATPAEADIALVYGLGFPPFRGGVF 673
>gi|145666459|gb|ABP88736.1| FadB [Pseudomonas putida]
Length = 715
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 255/511 (49%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +R +KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRAEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A+++ ILASNTS I +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVKGQVKDDAILASNTSNISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + V + + ++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPVVFEQR--DVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>gi|375136830|ref|YP_004997480.1| fatty oxidation complex alpha subunit [Acinetobacter calcoaceticus
PHEA-2]
gi|325124275|gb|ADY83798.1| fatty oxidation complex alpha subunit [Acinetobacter calcoaceticus
PHEA-2]
Length = 717
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 163/498 (32%), Positives = 254/498 (51%), Gaps = 21/498 (4%)
Query: 17 GLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQ---- 72
G VDAVVA ++L+ A + R W A + + L ++ F A+
Sbjct: 183 GAVDAVVAADKLLEAATDLVKQAISGRLNWKAKRQEKLEAVKLNPLEQMMAFNTAKGAVL 242
Query: 73 ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTS 132
A+ P + +D ++AG L+ EAE F K + +L+ +F +
Sbjct: 243 AKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAITPQAGALIGLFLNDQVVK 302
Query: 133 KVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRA 192
K + G P V + A+LG G+MG GIA P+I+K++ L G+ +
Sbjct: 303 KTAKKYEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKDIGNPQLALGMKEANS 360
Query: 193 NLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYC 252
L +V++ KM + +T++ + L Y+ FK+VD+VIEA+ EN +K+ + AD EK
Sbjct: 361 LLTKQVERKKMKPAQMGETLARIRPTLSYDEFKEVDIVIEAVTENPKVKEIVLADTEKNV 420
Query: 253 PPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLL 312
+ I+ASNTSTI + + + + VG HFF+P H+MPL+E++R +TS + I +
Sbjct: 421 RENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIATTV 480
Query: 313 DIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFR 372
+ +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D +D ++KFG PMGP
Sbjct: 481 VLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQVDNVMSKFGWPMGPAY 540
Query: 373 LADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETTRKGFYLYDERRKA 429
L D+VG + E FP+R YK I M E KR G+ GFY Y+ +K
Sbjct: 541 LIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IQAMYEAKRLGQKNDVGFYKYELDKKG 599
Query: 430 ----SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVK 485
+ DP + I A ++G + + ++I++ + NE R + I
Sbjct: 600 KKAKTVDPTAYEII--APFVTG-----EKREFDNQEIIDRMMLAFCNETVRCLEDNIVAT 652
Query: 486 AADLDIASVMGMGFPPYR 503
AA+ D+A +MG+GFPP+R
Sbjct: 653 AAEADMAMIMGVGFPPFR 670
>gi|410626670|ref|ZP_11337423.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
gi|410153771|dbj|GAC24192.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
Length = 719
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 259/513 (50%), Gaps = 13/513 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M T + K +A + G VDAVVAP +L A D ++ + W A + L +
Sbjct: 167 MTTGRDRKAAKALAEGAVDAVVAPEKLRDAALSMLQDAIDGKFGWEARRAQKKAPLKLNK 226
Query: 62 AREIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAG-LQKEAEDFQKLLRSET 117
+ F+ A+A A H P +D V A RAG L+ E + F KL +S+
Sbjct: 227 NESMMSFSTAKAMVFAQAGKHYPAPHTMVDTV-ANAARLDRAGALELENQGFTKLAKSDA 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
K+ V IF A + K G + + VK+ A+LG G+MG GIA + PVI+K+
Sbjct: 286 AKAQVGIFLADQ-LVKSKGKKQAKASTKDVKQTAVLGAGIMGGGIAYQSAVKGTPVIMKD 344
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N+ L+ G+ L +++GK+T T++ + L+Y + KDVD+VIEA++EN
Sbjct: 345 INQDALDLGLNEAAKILGKGMQRGKVTPAVMASTLNNIVPTLEYSAIKDVDLVIEAVVEN 404
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + + E+ ++ SNTSTI +N + + +R G HFF+P H MPL+EI
Sbjct: 405 PKVKGIVLKETEQNVSDDTVICSNTSTISINQLAQSLDKPERFCGMHFFNPVHKMPLVEI 464
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +T+ I ++ K+ KTPIVV +C GF VNR+ FPY LV G D +
Sbjct: 465 IRGEKTTDATIATVVAATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLVMDGADFVAV 524
Query: 358 DRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI--MQEDKRAGE 414
D+ + K FG PMGP L D+VG A + PER K P+ + + +R G+
Sbjct: 525 DKVMEKIFGWPMGPAYLLDVVGMDTADHASSVMADGIPERMQKIDNDPVTLLYKSERLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY + ++ P KK ++A + K +I+ + P+ NEA
Sbjct: 585 KNGKGFYNFSVDKRGRP---AKKAADEAYELFAPHCADK-RDFDADEIIARVMIPMANEA 640
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI AA+ D+A + G+GFPP+R F
Sbjct: 641 IRCLEEGIVGSAAEADMALLYGLGFPPFRGGVF 673
>gi|423204752|ref|ZP_17191308.1| fatty acid oxidation complex subunit alpha [Aeromonas veronii
AMC34]
gi|404625849|gb|EKB22662.1| fatty acid oxidation complex subunit alpha [Aeromonas veronii
AMC34]
Length = 715
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 170/511 (33%), Positives = 253/511 (49%), Gaps = 13/511 (2%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K + ++A +G +DAVVAP+ L S A Q D + + W + L +
Sbjct: 169 TGKDYRADDALKVGAIDAVVAPDALQSAAVQMIKDAIAGKLDWQSRRAAKKAPLRLSKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A A H P+ + VEA G L EA+ F KL +++ K+
Sbjct: 229 AMMSFTTAAGMVAAVAGKHYPAPMTAVKTVEAAAGMGRDEALAAEAQGFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LV IF + + A + A+LG G+MG GIA P ++K++NE
Sbjct: 289 LVGIFLNDQHIKALAKKAAK-QASKATGHAAVLGAGIMGGGIAYQSASKGIPAVMKDINE 347
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
K L G+G L +++KG++ K + +S +T L Y++ K VD+V+EA++EN +
Sbjct: 348 KALALGMGEATKLLNGQLEKGRIDGIKMGQVLSAITPTLSYDNVKGVDIVVEAVVENPKV 407
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K + ++E +LASNTSTI ++L+ + G HFF+P H MPL+EI+R
Sbjct: 408 KAAVLGEVEGVIGEDAVLASNTSTIPISLLAKGLKRPQNFCGMHFFNPVHRMPLVEIIRG 467
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
QTS + I ++ + K+P+VV +C GF VNR+ FPY LV G D +D+
Sbjct: 468 EQTSDETINRVVAYAAAMGKSPVVVNDCPGFFVNRVLFPYFFGFNKLVADGADFAAVDKV 527
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG G + FP R K I +M E R G+
Sbjct: 528 MEKEFGWPMGPAYLLDVVGIDTGHHAGDVMAQGFPARMSKEGRTAIDVMYEVNRFGQKNG 587
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD-IVEMIFFPVVNEACR 476
KGFY Y++ +K P K + A S +A K + +KD I+ + P++NE
Sbjct: 588 KGFYAYEQDKKGKP-----KKVADAASYELLAPIAKPKQDFDKDAIIARMMIPMINEVVL 642
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
EGI A+ DIA V G+GFPP+R F
Sbjct: 643 CLEEGIVATPAEADIALVYGLGFPPFRGGVF 673
>gi|386035884|ref|YP_005955797.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae KCTC 2242]
gi|424831674|ref|ZP_18256402.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|339763012|gb|AEJ99232.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae KCTC 2242]
gi|414709109|emb|CCN30813.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
Length = 714
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 175/515 (33%), Positives = 270/515 (52%), Gaps = 35/515 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
MMLT K ++ +A GLVD VV L+ A + AL RP + +++ P
Sbjct: 167 MMLTGKQLRPRQALKAGLVDEVVPQAILLQAAVELAL----KGRPTSREVPVRERVLAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
LG +F+F Q +++ +P V + VVE G+ G +G +EA F +L S+
Sbjct: 223 LGR-HLLFQFVGKQTQRKTQG-NYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSQ 280
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVIL 175
++L IFFA K PG P ++ VA+LGGGLMG GIA PV +
Sbjct: 281 QSQALRSIFFASTDLKKDPGAE---AGPGPLRSVAVLGGGLMGGGIAYVTACKGGLPVRI 337
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ + + + L +V++ ++ + ++ ++L++G DY+ F D+VIEA+
Sbjct: 338 KDIQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVF 397
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E+++LKQ++ +++E+Y P I ASNTS++ + I +++G HFFSP MPL+
Sbjct: 398 EDLALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLV 457
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++ T PQ I ++ + K+ KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 458 EVIPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIE 517
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDK 410
+ID A+ KFG P+GP +L D VG I TG + I F ER + + II + +D
Sbjct: 518 VIDNALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLESAFGERFSPPANIIDAILKDD 573
Query: 411 RAGETTRKGFYLYDERRKAS---PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
R G +GFYLY+ + + S PDP V + R S +LS + + E
Sbjct: 574 RKGRKNNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQS---------RLSAQQVAERCV 624
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E I A D DI +V G+GFPP+
Sbjct: 625 MMMLNEAARCFDEQIIRSARDGDIGAVFGIGFPPF 659
>gi|226958400|ref|NP_001069248.2| peroxisomal bifunctional enzyme [Bos taurus]
gi|296491297|tpg|DAA33360.1| TPA: peroxisomal bifunctional enzyme [Bos taurus]
Length = 723
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/522 (31%), Positives = 261/522 (50%), Gaps = 31/522 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
++++ + + EA LG++D +V + + + A++ + E RR + + +
Sbjct: 151 LIISGRHISANEALKLGIIDKIVNSDPIEESIKFAQRISDQSPESRR--ICNM----PVP 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A Q RK+ P P C+ V+A V G +KE E L S
Sbjct: 205 SLPNMDAIFSEALLQVRKRYPGWLSPEACVQAVQAAVQYPYDMGSKKEKELGLYLNTSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
K+L ++FFA+R +K G + R + V +LG G MG GI + + PVI
Sbjct: 265 AKALQYVFFAERMANKWSTPSGASWKTALGRPISSVGVLGLGTMGRGIVISFAKAQIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
E ++K LE + + L+ K + + + LT + + VD+VIEA+
Sbjct: 325 AVESDKKQLETASKIITSILEKEASKMQQSGHPWSGPKPRLTTSM--KELSGVDLVIEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E+++LK+ +FA+L C P +L +NTS +D++ I + ++G HFFSPAHVM L
Sbjct: 383 YEDMNLKKHVFAELSAVCKPEALLCTNTSALDIDEIASSSDRPHLVIGTHFFSPAHVMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM Y + L+E G+
Sbjct: 443 LEVIPSRFSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLRSYYDQTYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPERT---YKSMIIP 404
ID + +FG MGPFR++DL G + TG R + IP
Sbjct: 503 EEIDEVLEEFGFKMGPFRVSDLAGLDIGWKSRKGQGLTGPTLPPGSSARKRGGRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+YLYD+ R PDP + +F+ + R I P+ +S +
Sbjct: 563 DMLCESGRFGQKTGKGWYLYDKPLGRIHKPDPWLSQFLAQYRET--YHIKPRI--ISRDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
I+E + ++NEA R+ EG+A +D+ + G G+P +R
Sbjct: 619 ILERCLYSLINEAFRILGEGMAAIPEHIDVIYLHGFGWPRHR 660
>gi|333894550|ref|YP_004468425.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas sp. SN2]
gi|332994568|gb|AEF04623.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas sp. SN2]
Length = 716
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 169/513 (32%), Positives = 257/513 (50%), Gaps = 13/513 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M T K KG +A + G VDAVVAP L +A D + + W A + L +
Sbjct: 167 MTTGKDRKGAKALAEGAVDAVVAPESLRDSALSMLKDAADGKFKWEARRAQKKAPLQLNK 226
Query: 62 AREIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+ F+ AQA A H P ++ V+ L+ E F L +++
Sbjct: 227 NEAMMSFSTAQAMVFAQAGKHYPAPHKMVETVQKAAGLDRDGALKLENAGFVALTKTDAA 286
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
++ + IF A + + G A + VK A+LG G+MG GIA + PVI+K++
Sbjct: 287 QAQIGIFLADQ-LVRSKGKKQAKAATKEVKLNAVLGAGIMGGGIAYQSAVKGMPVIMKDI 345
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N + L+ G+ L +++GK+ + KT++ +T LDY + KD D+VIEA++EN
Sbjct: 346 NTEALDLGLNEAANILGKGMQRGKVDAKTMAKTLNAITPTLDYNTLKDADLVIEAVVENP 405
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K + ++E I+ SNTSTI +N + + +R G HFF+P H MPL+EI+
Sbjct: 406 KVKGIVLKEVEDVVADDAIICSNTSTISINQLAKSLDKPERFCGMHFFNPVHRMPLVEII 465
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R TS I ++ ++ KTPIVV +C GF VNR+ FPY L+ G D +D
Sbjct: 466 RGENTSEDTINAVVATTLRMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLLIDGADFVAVD 525
Query: 359 RAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIP--IMQEDKRAGET 415
+ + K FG PMGP L D+VG PER + P ++ ++KR G+
Sbjct: 526 KVMEKQFGWPMGPAYLMDVVGIDTGDHAADVMAAGIPERMARIGDDPVTVLYKEKRLGQK 585
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARS-MSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY Y + ++ P K E+A S ++ + D K +DI+ + P+ NEA
Sbjct: 586 NGKGFYNYGKDKRGKP---TKVAAEEAYSLLAPITADTK--DFDAQDIIARLMIPMANEA 640
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI AA+ D+A + G+GFPP+R F
Sbjct: 641 IRCLEEGIVGTAAEADMALLYGLGFPPFRGGVF 673
>gi|407682383|ref|YP_006797557.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'English Channel 673']
gi|407243994|gb|AFT73180.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'English Channel 673']
Length = 716
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/510 (33%), Positives = 255/510 (50%), Gaps = 15/510 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M T + KG +A + G VDAVVAP LV A D + + W A L +
Sbjct: 167 MTTGRDRKGAKALAEGAVDAVVAPEALVEGALSMVKDAADGKFDWQARRAVKKAPLQLNK 226
Query: 62 AREIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+ F+ AQA A H P ++ V+ L+ E E F L +++
Sbjct: 227 NEAMMSFSTAQAMVFAQAGKHYPAPHKMVETVQKAAGLDREGALKLENEGFVALAKTDAA 286
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
K+ + IF A + K G A ++ K A+LG G+MG GIA + PVI+K++
Sbjct: 287 KAQIGIFLADQ-LVKSKGKKQAKAATKQSKLNAVLGAGIMGGGIAYQSAVKGTPVIMKDI 345
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N+ L+ G+ L +++GK+ K +T++ +T L+Y + KD D+VIEA++EN
Sbjct: 346 NQGALDLGLSEAAKILGKGMQRGKVDAAKMAQTLNAITPTLEYSTLKDADLVIEAVVENP 405
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K + ++E I+ SNTSTI +N + E +R G HFF+P H MPL+EI+
Sbjct: 406 KVKGIVLKEVEDNVADDAIICSNTSTISINQLAESLDKPERFCGMHFFNPVHRMPLVEII 465
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +TS + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D +D
Sbjct: 466 RGEKTSEETINAVVAATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLLIDGADFVAVD 525
Query: 359 RAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI--MQEDKRAGET 415
+ + K FG PMGP L D+VG PER + P+ +++R G+
Sbjct: 526 KVMEKIFGWPMGPAYLMDVVGIDTGDHAADVMAAGIPERMARLDNDPVTLFYKEERLGQK 585
Query: 416 TRKGFYLY--DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY Y D+R K S P E+A ++ + K DI+ + P+ NE
Sbjct: 586 NGKGFYNYGVDKRGKPSKTPA-----EEAYALMAPHVAEK-TDFEADDIIARLMIPMANE 639
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
A R EGI AA+ D+A + G+GFPP+R
Sbjct: 640 AIRCLEEGIVDSAAEADMALLYGLGFPPFR 669
>gi|117620841|ref|YP_856678.1| multifunctional fatty acid oxidation complex subunit alpha
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117562248|gb|ABK39196.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 715
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 184/515 (35%), Positives = 270/515 (52%), Gaps = 26/515 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALD---ILEHRRPWVATLYKTDKIE 57
+MLT K V+ ++A LGLVD VV P+ L+ A + A E +R L +T+K
Sbjct: 166 LMLTGKQVRAKQAKKLGLVDDVVPPSILLDAAIKLAKKGKPRHELKRDLQGKLLETNK-- 223
Query: 58 PLGEAREIFKFARAQAR-KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
LG + +F AR + K N P + ++VV GV G +AGL E+ F +L+ +
Sbjct: 224 -LGR-KVLFDQARKGVKAKTRGNYPAPDLILEVVRIGVEEGMQAGLAAESRHFGELVMTA 281
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVIL 175
+L IFFA K VT G PR+V A+LGGGLMG GIA + PV +
Sbjct: 282 ESAALRSIFFATTEMKKE--VTYQGAEPRKVGHAAVLGGGLMGGGIAFVTATKAGVPVRI 339
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K+V + + L ++K+ ++ + + EK +SLLTG LDY F VDMV+EA+
Sbjct: 340 KDVASSGIGNAMRYSYDILAKKLKRRQLLRSELEKQMSLLTGTLDYSGFHRVDMVVEAVF 399
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E++SLK Q+ D+E+ C H + ASNTS++ ++ I +R+VG H+FSP MPL
Sbjct: 400 EDLSLKHQMVKDVERECGEHTVFASNTSSLPIHQIASVAAHPERVVGLHYFSPVDKMPLA 459
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EI+ TS + + L + KTPIVV + GF VNR+ PY A LV G +
Sbjct: 460 EIIPHAGTSAETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVE 519
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK--SMIIPIMQEDKRAG 413
++D A+ FG P+GP L D VG V + ++ + ++Q D R G
Sbjct: 520 VLDGALLDFGFPVGPITLLDEVGIDVGAKISPILEKELGGEQFQAPAAFNKLLQND-RKG 578
Query: 414 ETTRKGFYLYDERRKASP-----DPEVKKFIEKARSMSGV-AIDPKFAKLSEKDIVEMIF 467
KGFYLY KA+P E KK +++ S+ GV I P+ AKL++ ++ E
Sbjct: 579 RKNGKGFYLYG---KAAPRSKLTGKEGKKMVDE--SVYGVLGISPQ-AKLAKTELAERCV 632
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA G+ A D DI ++ G+GFPP+
Sbjct: 633 LMMLNEAAMALDSGVVASARDGDIGAIFGIGFPPF 667
>gi|448240036|ref|YP_007404089.1| multifunctional fatty acid oxidation complex subunit alpha
[Serratia marcescens WW4]
gi|445210400|gb|AGE16070.1| multifunctional fatty acid oxidation complex subunit alpha
[Serratia marcescens WW4]
Length = 729
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 260/519 (50%), Gaps = 24/519 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K V ++A +GLVDAVVAP +L A ++ + W A + K+EPL
Sbjct: 166 IIAAGKDVSAKDALKVGLVDAVVAPEKLAEAALNMLQQAIDGKLDWRAA--RQPKLEPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + A + P+ + +EA G L+ E F L RS
Sbjct: 224 LSPIEAAMSFTTAKGMVLQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARS 283
Query: 116 ETCKSLVHIF----FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNY 171
++LV IF F + K+ D AP K+ A+LG G+MG GIA L
Sbjct: 284 NEARALVGIFLNDQFVKGQAKKLAKNVD---AP---KQAAVLGAGIMGGGIAYQSALKGV 337
Query: 172 PVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVI 231
PVI+K++++K L G+ L ++++GK+ K + +S + LDY + +++
Sbjct: 338 PVIMKDISDKSLTLGMREAAKLLNKQLERGKLDGLKMAQVLSTIQPTLDYAGIERAQVIV 397
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHV 291
EA++EN +K + +++E +LASNTSTI +N + + G HFF+P H
Sbjct: 398 EAVVENPKVKAAVLSEVEGLIGEDTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHR 457
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
MPL+EI+R QTS I ++ ++ KTPIVV +C GF VNR+ FPY LL+ G
Sbjct: 458 MPLVEIIRGEQTSDDTIAKVVAYASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDG 517
Query: 352 TDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQE 408
D ID+ + K FG PMGP L D+VG A FP+R K I +M +
Sbjct: 518 ADFRQIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPDRMSKDYRDAIDVMFD 577
Query: 409 DKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFF 468
++R G+ + GFY Y + K P K E+ ++ P+ +S+++I+ +
Sbjct: 578 NQRFGQKNQLGFYRYSQDSKGKPR---KDNDEQTDALLAEVSQPR-QTISDEEIIARMMI 633
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
P++NE R E I A+ D+A V G+GFPP+ F
Sbjct: 634 PMINEVVRCLEENIVASPAEADMALVYGIGFPPFHGGAF 672
>gi|365108571|ref|ZP_09336430.1| fatty acid oxidation complex subunit alpha [Citrobacter freundii
4_7_47CFAA]
gi|363640465|gb|EHL79936.1| fatty acid oxidation complex subunit alpha [Citrobacter freundii
4_7_47CFAA]
Length = 715
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 167/513 (32%), Positives = 260/513 (50%), Gaps = 32/513 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWAL-DILEHRRPWVATLYKTDKI--E 57
M+LT K ++ ++A +GLVD VV + L+ A + A D HR TL +++
Sbjct: 167 MILTGKQLRAKQALKVGLVDEVVPHSILLEAAVELAKKDSSAHR-----TLPVRERVLAG 221
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
PLG A ++ +K N ++V+E G+ G +G EA F +L +
Sbjct: 222 PLGRALLFRMASKKTVQKTQGNYPATERILEVIETGLAQGSSSGYDAEASAFGELAMTSQ 281
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L HIFFA K PG +D P + G G TA PV +K+
Sbjct: 282 SQALRHIFFANTDVKKDPG-SDAKPGPLNSVGILGGGLMGGGIAYVTAC-KGGLPVRIKD 339
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N K + + L+++V++ + + +K ++L++G +DY F D++IEA+ E+
Sbjct: 340 INAKGINHALKYSWDQLETKVRRRHIKASERDKQLALISGTIDYRGFAHRDLIIEAVFED 399
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+SLKQ++ A++E+ C PH I ASNTS++ ++ I ++++G HFFSP MPL+E+
Sbjct: 400 LSLKQRMVAEVEQNCAPHTIFASNTSSLPISDIAANAARPEQVIGLHFFSPVEKMPLVEV 459
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS Q I + + KK KTPIVV + GF VNR+ PY A ++ G + I
Sbjct: 460 IPHATTSEQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETI 519
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRA 412
D A+ KFG P+GP +L D VG I TG + I + ER + + ++ + D R
Sbjct: 520 DAALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSAPANVVASILNDDRK 575
Query: 413 GETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
G +GFYLY + + S DP + I GV +LS + E
Sbjct: 576 GRKNGRGFYLYGAKGRKSKKQVDPAIYTLI-------GVQGQ---GRLSAAQVAERCVML 625
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E I A D DI +V G+GFPP+
Sbjct: 626 MLNEAARCFDEKIVRSARDGDIGAVFGIGFPPF 658
>gi|283832235|ref|ZP_06351976.1| fatty oxidation complex, alpha subunit FadJ [Citrobacter youngae
ATCC 29220]
gi|291071876|gb|EFE09985.1| fatty oxidation complex, alpha subunit FadJ [Citrobacter youngae
ATCC 29220]
Length = 714
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 168/513 (32%), Positives = 260/513 (50%), Gaps = 32/513 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWAL-DILEHRRPWVATLYKTDKI--E 57
M+LT K ++ ++A GLVD VV + L+ A + A D HR TL +++
Sbjct: 167 MILTGKQLRAKQALKAGLVDEVVPQSILLEAAVELAKKDSSTHR-----TLPVRERVLAG 221
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
PLG A ++ A+K N ++V+E G+ G +G EA F +L +
Sbjct: 222 PLGRALLFRMASKKTAQKTQGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTPQ 281
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L HIFFA K PG +D+ P + G G TA PV +K+
Sbjct: 282 SQALRHIFFANTDVKKDPG-SDVQPGPLNRVGILGGGLMGGGIAYVTA-CKGGLPVRIKD 339
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N K + + L+++V++ + + +K ++L++G DY F D+VIEA+ E+
Sbjct: 340 INAKGINHALKYSWDQLETKVRRRHIKASERDKQLALISGSTDYRGFAHRDLVIEAVFED 399
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQQ+ A++E++C PH I ASNTS++ + I +++VG HFFSP MPL+E+
Sbjct: 400 LALKQQMVAEVEQHCAPHTIFASNTSSLPIGDIAANAARPEQVVGLHFFSPVEKMPLVEV 459
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS Q I + + KK KTPIVV + GF VNR+ PY A ++ G + I
Sbjct: 460 IPHAATSEQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETI 519
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRA 412
D A+ KFG P+GP +L D VG I TG + I + ER + + ++ + D R
Sbjct: 520 DAALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSAPANVVASILNDDRK 575
Query: 413 GETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
G +GFYLY + + S DP + I GV +L+ + E
Sbjct: 576 GRKNGRGFYLYGAKGRKSKKQVDPAIYTLI-------GVQGQ---GRLTAVQVAERCVML 625
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E + A D DI +V G+GFPP+
Sbjct: 626 MLNEAARCFDEKVVRSARDGDIGAVFGIGFPPF 658
>gi|237732366|ref|ZP_04562847.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter sp. 30_2]
gi|226907905|gb|EEH93823.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter sp. 30_2]
Length = 715
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 168/513 (32%), Positives = 260/513 (50%), Gaps = 32/513 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWAL-DILEHRRPWVATLYKTDKI--E 57
M+LT K ++ ++A +GLVD VV + L+ A + A D HR TL +++
Sbjct: 167 MILTGKQLRAKQALKVGLVDEVVPHSILLEAAVELAKKDSSAHR-----TLPVRERVLAG 221
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
PLG A ++ A+K N ++V+E G+ G +G EA F +L +
Sbjct: 222 PLGRALLFRMASKKTAQKTQGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQ 281
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L HIFFA K PG +D P + G G TA PV +K+
Sbjct: 282 SQALRHIFFANTDVKKDPG-SDAKPGPLNSVGILGGGLMGGGIAYVTAC-KGGLPVRIKD 339
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N K + + L+++V++ + + +K ++L++G +DY F D++IEA+ E+
Sbjct: 340 INAKGINHALKYSWDQLETKVRRRHIKASERDKQLALISGSIDYRGFAHRDLIIEAVFED 399
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+SLKQ++ A++E+ C PH I ASNTS++ + I ++++G HFFSP MPL+E+
Sbjct: 400 LSLKQRMVAEVEQNCAPHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEV 459
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS Q I + + KK KTPIVV + GF VNR+ PY A ++ G + I
Sbjct: 460 IPHATTSEQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETI 519
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRA 412
D A+ KFG P+GP +L D VG I TG + I + ER + + ++ + D R
Sbjct: 520 DAALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSAPANVVASILNDDRK 575
Query: 413 GETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
G +GFYLY + + S DP + I GV +L+ I E
Sbjct: 576 GRKNGRGFYLYGAKGRKSKKQVDPAIYTLI-------GVQGQ---GRLTAAQIAERCVML 625
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E I A D DI +V G+GFPP+
Sbjct: 626 MLNEAARCFDERIVRSARDGDIGAVFGIGFPPF 658
>gi|407686309|ref|YP_006801482.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407289689|gb|AFT94001.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 716
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/510 (33%), Positives = 255/510 (50%), Gaps = 15/510 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M T + KG +A + G VDAVVAP LV A D + + W A L +
Sbjct: 167 MTTGRDRKGAKALAEGAVDAVVAPEALVEGALSMVKDAADGKFDWQARRAVKKAPLQLNK 226
Query: 62 AREIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
+ F+ AQA A H P ++ V+ L+ E E F L +++
Sbjct: 227 NEAMMSFSTAQAMVFAQAGKHYPAPHKMVETVQKAAGLDREGALKLENEGFVALAKTDAA 286
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
K+ + IF A + K G A ++ K A+LG G+MG GIA + PVI+K++
Sbjct: 287 KAQIGIFLADQ-LVKSKGKKQAKAATKQSKLNAVLGAGIMGGGIAYQSAVKGTPVIMKDI 345
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N+ L+ G+ L +++GK+ K +T++ +T L+Y + KD D+VIEA++EN
Sbjct: 346 NQGALDLGLSEAAKILGKGMQRGKVDATKMAQTLNAITPTLEYSTLKDADLVIEAVVENP 405
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K + ++E I+ SNTSTI +N + E +R G HFF+P H MPL+EI+
Sbjct: 406 KVKGIVLKEVEDNVADDAIITSNTSTISINQLAESLDKPERFCGMHFFNPVHRMPLVEII 465
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +TS + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D +D
Sbjct: 466 RGEKTSEETINAVVAATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLLIDGADFVAVD 525
Query: 359 RAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPI--MQEDKRAGET 415
+ + K FG PMGP L D+VG PER + P+ +++R G+
Sbjct: 526 KVMEKIFGWPMGPAYLMDVVGIDTGDHAADVMAAGIPERMARLDNDPVTLFYKEERLGQK 585
Query: 416 TRKGFYLY--DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY Y D+R K S P E+A ++ + K DI+ + P+ NE
Sbjct: 586 NGKGFYNYGVDKRGKPSKTPA-----EEAYALMAPHVAEK-TDFEADDIIARLMIPMANE 639
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
A R EGI AA+ D+A + G+GFPP+R
Sbjct: 640 AIRCLEEGIVDSAAEADMALLYGLGFPPFR 669
>gi|123440660|ref|YP_001004653.1| multifunctional fatty acid oxidation complex subunit alpha
[Yersinia enterocolitica subsp. enterocolitica 8081]
gi|166971644|sp|A1JIG4.1|FADB_YERE8 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|122087621|emb|CAL10402.1| fatty acid oxidation complex alpha subunit [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 729
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 169/520 (32%), Positives = 260/520 (50%), Gaps = 26/520 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ K + ++A +GLVDAVVAP +LV A ++ + W A + K+EPL
Sbjct: 166 IIAAGKDIIAKDALKVGLVDAVVAPEKLVDAALSILNQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + A + P+ + +EA G L E F L S
Sbjct: 224 LNPTEAAMCFTIAKGMVMQVAGKHYPAPLTAVKTIEAAAKFGRAEALILETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQ---RGTSK--VPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSN 170
++LV IF +G +K GV+ AP K+ A+LG G+MG GIA L
Sbjct: 284 NEARALVGIFLNDQYVKGQAKKLSKGVS----AP---KQAAVLGAGIMGGGIAYQSALKG 336
Query: 171 YPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMV 230
PVI+K++N+K L G+ L ++++GK+ K ++ + LDY + ++
Sbjct: 337 VPVIMKDINDKSLTLGMNEAAKLLNKQLERGKIDGLKMANILATIQPTLDYAGIERAQVI 396
Query: 231 IEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAH 290
+EA++EN +K + A++E +LASNTSTI ++ + + + G HFF+P H
Sbjct: 397 VEAVVENPKVKAAVLAEVETLIGEETVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVH 456
Query: 291 VMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVER 350
MPL+EI+R +TS + I ++ ++ KTPIVV +C GF VNR+ FPY +LV
Sbjct: 457 RMPLVEIIRGTKTSDKTIAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRD 516
Query: 351 GTDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQ 407
G D ID+ + K FG PMGP L D+VG A FPER K + +M
Sbjct: 517 GADFRQIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAVGFPERMNKDYRDAVDVMF 576
Query: 408 EDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
+++R G+ +GFY Y + K P E + ++ + + K S+ DI+
Sbjct: 577 DNQRFGQKNGQGFYRYTQDTKGKPRKENDEQVDALLAQ----VSQPLQKFSDDDIIARTM 632
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
P++NE R EGI A+ D+A V G+GFPP+ F
Sbjct: 633 IPMINEVVRCLEEGIIASPAEGDMALVYGLGFPPFHGGVF 672
>gi|453064392|gb|EMF05358.1| multifunctional fatty acid oxidation complex subunit alpha
[Serratia marcescens VGH107]
Length = 729
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 260/519 (50%), Gaps = 24/519 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K V ++A +GL+DAVVAP +L A ++ + W A + K+EPL
Sbjct: 166 IIAAGKDVSAKDALKVGLIDAVVAPEKLAEAALNMLQQAIDGKLDWRAA--RQPKLEPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + A + P+ + +EA G L+ E F L RS
Sbjct: 224 LSPIEAAMSFTTAKGMVLQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARS 283
Query: 116 ETCKSLVHIF----FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNY 171
++LV IF F + K+ D AP K+ A+LG G+MG GIA L
Sbjct: 284 NEARALVGIFLNDQFVKGQAKKLAKNVD---AP---KQAAVLGAGIMGGGIAYQSALKGV 337
Query: 172 PVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVI 231
PVI+K++++K L G+ L ++++GK+ K + +S + LDY + +++
Sbjct: 338 PVIMKDISDKSLTLGMSEAAKLLNKQLERGKLDGLKMAQVLSTIQPTLDYAGIERAQVIV 397
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHV 291
EA++EN +K + +++E +LASNTSTI +N + + G HFF+P H
Sbjct: 398 EAVVENPKVKAAVLSEVEGLIGEDTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHR 457
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
MPL+EI+R QTS I ++ ++ KTPIVV +C GF VNR+ FPY LL+ G
Sbjct: 458 MPLVEIIRGEQTSDDTIAKVVAYASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDG 517
Query: 352 TDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQE 408
D ID+ + K FG PMGP L D+VG A FP+R K I +M +
Sbjct: 518 ADFRQIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPDRMSKDYRDAIDVMFD 577
Query: 409 DKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFF 468
++R G+ + GFY Y + K P K E+ ++ P+ +S+++I+ +
Sbjct: 578 NQRFGQKNQLGFYRYSQDSKGKPR---KDNDEQTDALLAEVSQPR-QTISDEEIIARMMI 633
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
P++NE R E I A+ D+A V G+GFPP+ F
Sbjct: 634 PMINEVVRCLEEKIVASPAEADMALVYGIGFPPFHGGAF 672
>gi|227114333|ref|ZP_03827989.1| multifunctional fatty acid oxidation complex subunit alpha
[Pectobacterium carotovorum subsp. brasiliensis PBR1692]
Length = 729
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 173/518 (33%), Positives = 261/518 (50%), Gaps = 30/518 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K + +A +GLV AVVA ++LV A + + W A Y+ K+EPL
Sbjct: 166 IIAAGKDIGAADALKVGLVQAVVANDKLVHAAIKMLKQAINGSLDWQA--YRRPKLEPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+A + A + P++ + +EA LQ E + F +L RS
Sbjct: 224 LNKIEAMMSFTTAKAMVLQTAGKHYPAPMLAVKTIEAAATMTRDDALQLETQHFVQLARS 283
Query: 116 ETCKSLVHIF----FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNY 171
++LV IF + + K+ G T + ++VA+LG G+MG GIA
Sbjct: 284 NEARALVGIFLNDQYVKSKAKKLVGETSVP------QQVAVLGAGIMGGGIAYQSAFKGV 337
Query: 172 PVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVI 231
P+ +K++NEK L G+ L ++++GK+ K ++ + LDY F+ D+V+
Sbjct: 338 PIRMKDINEKPLALGMNEAAKLLNKQMERGKLDGMKMATILASIQPTLDYAGFERTDIVV 397
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHV 291
EA++EN +K + A+ E + + ILASNTSTI + + G HFF+P H
Sbjct: 398 EAVVENPKIKASVLAETESHVSENTILASNTSTIPIASLAASLKRPQNFCGMHFFNPVHR 457
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
MPL+EI+R QTS I ++ K+ KTPIVV +C GF VNR+ FPY A LL+ G
Sbjct: 458 MPLVEIIRGPQTSDNTIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDG 517
Query: 352 TDLYLIDRAI-TKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQE 408
D ID + KFG PMGP L D+VG A E FP+R K I ++ E
Sbjct: 518 ADFRDIDNVMEKKFGWPMGPAYLLDVVGIDTAHHAQAVMAEGFPQRMAKDYRDAIDVLFE 577
Query: 409 DKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAID---PKFAKLSEKDIVEM 465
+R G+ GFY Y K +++K E+ ++ + D PK A S ++I+
Sbjct: 578 HQRFGQKNGHGFYRYQTDSKG----KLRK--EQDEAVDAILQDISQPKKA-FSAEEIIAR 630
Query: 466 IFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ P++NE R E I A+ D+A V G+GFPP+
Sbjct: 631 MMIPMINEVARCLEEDIVASPAEADMALVYGLGFPPFH 668
>gi|448748421|ref|ZP_21730053.1| Fatty oxidation complex, alpha subunit FadB [Halomonas titanicae
BH1]
gi|445564006|gb|ELY20139.1| Fatty oxidation complex, alpha subunit FadB [Halomonas titanicae
BH1]
Length = 745
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 260/512 (50%), Gaps = 35/512 (6%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTARQWALDILEH----------RRPWVATLYKTDKIEP 58
+ + A +G VDAVV QL + ALDIL+ RR + K + IE
Sbjct: 196 RADAALKVGAVDAVVTDEQL----EEAALDILDRANAGELDYQARRAEKTSPLKLNPIE- 250
Query: 59 LGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQK--EAEDFQKLL 113
++ F A+ A K P+ P+ I V++ G +G G + EA+ F KL
Sbjct: 251 -----QMMAFETAKGYVAGKAGPHYPAPVEAIKVIQKG--AGEERGRAQAIEAKAFAKLA 303
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
S +LV +F + K + P VK+ A+LG G+MG GIA P+
Sbjct: 304 LSSVAFNLVGLFLNDQVVKKKASKYEKQAQP--VKQTAVLGAGIMGGGIAYQSASKGTPI 361
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
++K++ + +E G+ R +V++ K+T E+ + ++ + L Y F +VD+V+EA
Sbjct: 362 LMKDIKDDAIELGLKEARKLFAKQVERKKLTTEQMAEKLTNIRPTLSYGDFGNVDLVVEA 421
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
++EN +K + ++E + IL SNTSTI +N + + + G HFF+P H MP
Sbjct: 422 VVENPKVKDAVLTEVEGMVSENTILTSNTSTISINRLAQNLKRPENFCGMHFFNPVHRMP 481
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R +TS + + + + KTPIVV +C GF VNR+ FPY LVE+G D
Sbjct: 482 LVEVIRGEKTSDAAVAATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSFLVEQGAD 541
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKR 411
+D+ + KFG PMGP L D+VG A+ E FP+R + I +M ++ R
Sbjct: 542 FQHVDKVMEKFGWPMGPAYLLDVVGLDTAVHANEVMAEGFPDRMARDGKTAIQVMYDNDR 601
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ KGFY Y+E +K P KK ++A + + + S++DI+ + P+
Sbjct: 602 LGQKNDKGFYAYEEDKKGKP----KKVTDEAAYALVKEVVKEHKEFSDEDIIARMMVPLC 657
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI A+ D+A + G+GFPP+R
Sbjct: 658 LETVRCLEDGIVATPAEADMALIYGIGFPPFR 689
>gi|397171920|ref|ZP_10495318.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella aestuarii B11]
gi|396086638|gb|EJI84250.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella aestuarii B11]
Length = 712
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 263/506 (51%), Gaps = 15/506 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI-EPL 59
M+LT K V+ +A LGLVD VV + L+ A + AL R +L DK+ E
Sbjct: 168 MILTGKQVRAAQAKKLGLVDEVVPESILLDAAVKKALAGKPRREAKKQSLL--DKLLENT 225
Query: 60 GEARE-IFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
G R+ +F A Q +K N + I+V++ GV G + GL EA+ F +L +
Sbjct: 226 GPGRKLVFSQALKQTLKKTQGNYPAALRIIEVIQTGVEQGYQKGLAAEAKAFGQLCMTPE 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIAT-ALILSNYPVILK 176
+L IFFA K G D PR+V+K A+LGGGLMG GIA + + V +K
Sbjct: 286 SAALRSIFFATTQMKKESGAGDA--KPRKVRKAAVLGGGLMGGGIANVSATKAGVAVRIK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ + + L + KK +++ + +K + L+TG DY F DVD+V+EA+ E
Sbjct: 344 DIAEQGINNALKYSFDILNKKYKKRFISKAEMQKQLLLITGTTDYSGFHDVDIVVEAVFE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
++SLKQQ+ AD+E++C H I ASNTS++ ++ I E+ + ++G H+FSP MPL+E
Sbjct: 404 DLSLKQQMVADIEQHCAEHTIFASNTSSLPIHKIAEKAARPENVIGLHYFSPVDKMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++ +TS + I + +K KTPIVV + GF VNR+ Y A ++ G +
Sbjct: 464 VIAHEKTSAETIATTVAFARKQGKTPIVVKDGAGFYVNRILALYMNEAANILLAGEPVEK 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETT 416
IDRA+ KFG P+GP L D VG V ER + D R G+ T
Sbjct: 524 IDRALVKFGFPVGPVTLLDEVGIDVGAKISPILTAELGERFAAPAAFDKLLADGRKGKKT 583
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
KGFYLY + K K E ++ GV P L+ ++I ++NEA R
Sbjct: 584 EKGFYLYGKAAKKG----KKLVDESVYAVLGVTPAP---ALNGEEIASRCTAQMLNEAVR 636
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPY 502
EGI A DI ++ G+GFPP+
Sbjct: 637 CLEEGIIASARGGDIGAIFGIGFPPF 662
>gi|358011632|ref|ZP_09143442.1| multifunctional fatty acid oxidation complex subunit alpha
[Acinetobacter sp. P8-3-8]
Length = 717
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 168/508 (33%), Positives = 258/508 (50%), Gaps = 15/508 (2%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEP--LGE 61
TS + + A G VDAVVAP QL + A + R W A + +K+EP L
Sbjct: 170 TSANKRPDAALKDGAVDAVVAPEQLQAAAIDLVKQAIAGRLDWKAK--RQEKLEPVKLDM 227
Query: 62 AREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ F ++ A+ P + +D ++AGV L+ EAE F K +
Sbjct: 228 LEQMMAFNSSKGVILAKANPAQYPAPKLLLDSLQAGVSLNRDGALKAEAEAFAKAAITPQ 287
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L+ +F + K + G P V + A+LG G+MG GIA P+I+K+
Sbjct: 288 AGALIGLFINDQVVKKASKKHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKD 345
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L G+ L +V++ KMT K +T++ + L Y+ FK+VD+VIEA+ EN
Sbjct: 346 IGNPQLALGMAEANKLLTKQVERKKMTPAKMGETLARIRPTLSYDEFKEVDIVIEAVTEN 405
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + A+ EK + I+ASNTSTI + + E + VG HFF+P H+MPL+E+
Sbjct: 406 PKVKGIVLAETEKNVRDNTIIASNTSTISITRLAENLQRPENFVGMHFFNPVHMMPLVEV 465
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LL++ G D +
Sbjct: 466 IRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLLKDGADFQQV 525
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRAGET 415
D+ + KFG PMGP L D+VG + E FP+R I IM E+KR G+
Sbjct: 526 DKVMEKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDFKGAIEIMYENKRLGQK 585
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
GFY Y+ RK + K A + + + ++I++ + NE
Sbjct: 586 NDVGFYKYELDRKGK---KAKAVDPTAYELVATMATTEKHEFDAQEIIDRMMLAFCNETV 642
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
R + I A++ D+A +MG+GFPP+R
Sbjct: 643 RCLEDNIVATASEADMAMIMGVGFPPFR 670
>gi|153001296|ref|YP_001366977.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella baltica OS185]
gi|171704556|sp|A6WQ25.1|FADJ_SHEB8 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|151365914|gb|ABS08914.1| fatty acid oxidation complex, alpha subunit FadJ [Shewanella
baltica OS185]
Length = 706
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 258/506 (50%), Gaps = 16/506 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL +P +L +E
Sbjct: 165 MMLTGKKIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRAPKPVKKSLV-NQVLEGTS 223
Query: 61 EAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I F A Q K+ N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQATKQVEKKTQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G +PR+VKK ILGGGLMG GIA+ + PV +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GASPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++EK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 342 ISEKGLSNALAYAYKLLDKGVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ ++ I E + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLSDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-AIDPKFAKLSEKDIVEMIFFPVVNEACR 476
KGFY Y K + K +++ S+ GV I P K K + E ++NEA R
Sbjct: 582 KGFYQYGASSKKA------KAVDE--SVYGVLGIKPGTNK-DAKAVAERCVVQMLNEAVR 632
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPY 502
+GI D DI ++ G+GFPP+
Sbjct: 633 CLEDGIIASPRDGDIGAIFGIGFPPF 658
>gi|410611602|ref|ZP_11322697.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
gi|410168805|dbj|GAC36586.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
Length = 727
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 172/505 (34%), Positives = 265/505 (52%), Gaps = 15/505 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRR-PWVATLYKTDKIEPL 59
MMLT ++ ++A + G+VD +V + L+ A + A R P + + + + +
Sbjct: 187 MMLTGASIRAKQAKNYGIVDHMVPQSILLDVAIEMAKKPKPKRNGPKLDLMGRFLENTSV 246
Query: 60 GEAREIFKFARAQ-ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
G +FK AR Q A K N P + ID +E G+ G + GL+ EA+ F L+ S
Sbjct: 247 GR-NLMFKQARKQTASKTQGNYPSPELIIDCIETGLSKGFKKGLEVEAKHFGHLVMSPES 305
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
+L +FFA K GV G+ P +KKV +LGGGLMG GIA + P +K+
Sbjct: 306 AALRSLFFATTDMKKETGVE--GVKPASLKKVGVLGGGLMGGGIAFVTATKAGLPARIKD 363
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + + I L +VK+G M + +K ++LLTG +DY F D D+VIEA+ E+
Sbjct: 364 IRSEGIANAIKYSFDILNKKVKRGFMHKSDMQKQMALLTGSVDYAGFSDADVVIEAVFED 423
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LKQ + A++E C H I ASNTS+I + I + ++++G H+FSP MPL E+
Sbjct: 424 LTLKQNMVAEIEANCAEHTIFASNTSSIPITQIAAKAKRPEQVIGLHYFSPVDKMPLAEV 483
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ ++TS I +++ KK KTPIVV + GF VNR+ PY A ++ G + I
Sbjct: 484 IAHDKTSDLTISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNEAAEVLLSGEPIAHI 543
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DR++ KFG P+GP +L D VG V G F +R + + D R G+ +
Sbjct: 544 DRSLVKFGFPVGPVKLLDEVGIDVGAKIGPILEAQFGDRFASNPGFDKILADDRKGKKNK 603
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
+GFY Y ++ EV I + + I P +K+S + I E ++NEA
Sbjct: 604 RGFYDYSGKKLGK---EVDSSI-----YTLLGITPA-SKMSHEQIAERCVLLMLNEAAMC 654
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
EG+ A D DI ++ G+GFPP+
Sbjct: 655 LDEGVVRNARDGDIGAIFGIGFPPF 679
>gi|290508408|ref|ZP_06547779.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. 1_1_55]
gi|289777802|gb|EFD85799.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. 1_1_55]
Length = 714
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 172/515 (33%), Positives = 270/515 (52%), Gaps = 35/515 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
MMLT + ++ +A GLVD VV L+ A + AL RP + +++ P
Sbjct: 167 MMLTGRQLRARQALKAGLVDEVVPQAILLQAAVELAL----KGRPASRDMPVRERVLAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
LG +F F Q +++ +P V + VVE G+ G +G +EA F +L +
Sbjct: 223 LGR-HLLFHFVGKQTQRKTQG-NYPAVKRILQVVENGLTHGCSSGYAEEARAFGELAMTP 280
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVIL 175
++L IFFA K G P + +A+LGGGLMG GIA PV +
Sbjct: 281 QSQALRSIFFASTDLKKDRGAE---AEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRI 337
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ + + + L +V++ ++ + ++ ++L++G DY+ F D+VIEA+
Sbjct: 338 KDIQPRGINHALKYSWDLLNKQVRQRRLRPSERDRQMALISGATDYQGFAHRDVVIEAVF 397
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E+++LKQ++ +++E+YC P I ASNTS++ + I ++++G HFFSP MPL+
Sbjct: 398 EDLALKQRMVSEVEQYCGPQTIFASNTSSLPIGDIAAHASRPEQVIGLHFFSPVEKMPLV 457
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++ T PQ I ++ + K+ KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 458 EVIPHKGTDPQAIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVE 517
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDK 410
ID+A+ KFG P+GP +L D VG I TG + I F ER + + II ++ +D
Sbjct: 518 EIDKALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLESAFGERFSPPANIIDVILKDD 573
Query: 411 RAGETTRKGFYLYDERRKAS---PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
R G +GFYLY+ + + S PDP V + ID ++LS + + E
Sbjct: 574 RKGRKNNRGFYLYETKGRKSKKRPDPAVYPLL---------GIDRPQSRLSAQQVAERCV 624
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E I A D DI +V G+GFPP+
Sbjct: 625 MMMLNEAARCFDEQIIRSARDGDIGAVFGIGFPPF 659
>gi|392310749|ref|ZP_10273283.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudoalteromonas citrea NCIMB 1889]
Length = 736
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 171/526 (32%), Positives = 263/526 (50%), Gaps = 30/526 (5%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
MLT K V+ ++A GLV+ V + L+ A ++A + A K DK+ L E
Sbjct: 164 MLTGKQVRAKQAKKAGLVNDSVPHSILLDVAAKFAT-----KGKAKAAQPKLDKVSKLLE 218
Query: 62 ARE-----IFKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
+ IFK A+ +K + P+ I V A V G + EAE F L+ +
Sbjct: 219 SNPFGRNIIFKKAQDNVMKKTGGHYPAPLNIIKAVRASVELGELKAYKTEAEGFADLVMT 278
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVI 174
E +SL IFFA K D + +K+ A+LGGGLMG+GIA + + + V
Sbjct: 279 EVSRSLRGIFFATTEMKKEYKSDD----AQPIKRTAVLGGGLMGAGIAHVSAVKAGALVR 334
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K+V + + + L R K+ M++ + + T++ +TG DY +FK VDMVIEA+
Sbjct: 335 IKDVAHQGVSNAMNYSYKILSKRQKRRIMSKAELQLTMNRITGSTDYTAFKHVDMVIEAV 394
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E++ LKQ + AD+E+ I ASNTS++ ++ I E+ + ++G H+FSP MPL
Sbjct: 395 FEDLQLKQSMVADIERESREDTIFASNTSSLPISQIAEQAQRPENVIGLHYFSPVEKMPL 454
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+ TS I ++ +K KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 455 VEIIPHEGTSETTIARTVNFARKQGKTPIVVKDKAGFYVNRILAPYVNEAANLLLAGEPI 514
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGE 414
ID+A+ +FG P+GP L D VG + + +R + + KR G
Sbjct: 515 DKIDQALVEFGFPVGPLALLDEVGIDIGSKIAPILEKELGDRFKAPNAFERLIDSKRLGR 574
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
T +GFY Y+++ KK E + G+ P +L++++I ++NEA
Sbjct: 575 KTGRGFYTYEKKG--------KKVDESVYELLGITQSP---RLNKQEIASRCVAQMLNEA 623
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR---FVTFIHRGFSKSSS 517
R EGI A D DI ++ G+GFPP+ F RG +K S
Sbjct: 624 ARCLDEGIISSARDGDIGAIFGIGFPPFLGGPFSYMDKRGINKVCS 669
>gi|423141010|ref|ZP_17128648.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379053564|gb|EHY71455.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 715
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 264/513 (51%), Gaps = 32/513 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
M+LT K ++ +A GLVD VV L+ + A+++ + R TL ++I P
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILL----EAAVELAKKERLAQRTLPVRERILAGP 222
Query: 59 LGEAREIFKFARAQ-ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
LG A +F+ R + A+K N IDV+E G+ G +G EA F +L +
Sbjct: 223 LGRAL-LFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTTQ 281
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L IFFA K PG +D P + G G TA PV +K+
Sbjct: 282 SQALRAIFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKD 339
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N + + + L+++V++ M + +K ++LL+G DY F D+VIEA+ E+
Sbjct: 340 INTQGINHALKYSWDLLETKVRRRHMKTSERDKQLALLSGSTDYRGFSHRDLVIEAVFED 399
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+SLKQQ+ A++E+ C H I ASNTS++ ++ I + ++++G HFFSP MPL+E+
Sbjct: 400 LSLKQQMVAEVEQNCASHTIFASNTSSLPISDIAAKAARPEQVIGLHFFSPVEKMPLVEV 459
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS Q I + + K+ KTPIVV + GF VNR+ PY A ++ G + I
Sbjct: 460 IPHASTSAQTIATTVKLAKRQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHI 519
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRA 412
D A+ KFG P+GP +L D VG I TG + I + ER + + ++ + D R
Sbjct: 520 DAALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSAPANVVASILNDDRK 575
Query: 413 GETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
G +GFYLY ++ + S DP + K I GV ++LS + + E
Sbjct: 576 GRKNGRGFYLYGKKGRKSKKQVDPAIYKLI-------GVQGQ---SRLSAQQVAERCVML 625
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E + A D DI +V G+GFPP+
Sbjct: 626 MLNEAARCFDEKVIRSARDGDIGAVFGIGFPPF 658
>gi|217972775|ref|YP_002357526.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella baltica OS223]
gi|217497910|gb|ACK46103.1| fatty acid oxidation complex, alpha subunit FadJ [Shewanella
baltica OS223]
Length = 706
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 258/506 (50%), Gaps = 16/506 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL +P +L +E
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRAPKPVKKSLV-NQVLEGTS 223
Query: 61 EAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I F A Q K+ N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQATKQVEKKTQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G +PR+VKK ILGGGLMG GIA+ + PV +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GASPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++EK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 342 ISEKGLSNALAYAYKLLDKGVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ ++ I E + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLSDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-AIDPKFAKLSEKDIVEMIFFPVVNEACR 476
KGFY Y K + K +++ S+ GV I P K K + E ++NEA R
Sbjct: 582 KGFYQYGASSKKA------KAVDE--SVYGVLGIKPGTNK-DAKAVAERCVVQMLNEAVR 632
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPY 502
+GI D DI ++ G+GFPP+
Sbjct: 633 CLEDGIIASPRDGDIGAIFGIGFPPF 658
>gi|329998416|ref|ZP_08303100.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. MS
92-3]
gi|365137258|ref|ZP_09343978.1| fatty acid oxidation complex subunit alpha [Klebsiella sp.
4_1_44FAA]
gi|419764099|ref|ZP_14290339.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
gi|328538691|gb|EGF64784.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. MS
92-3]
gi|363656270|gb|EHL95034.1| fatty acid oxidation complex subunit alpha [Klebsiella sp.
4_1_44FAA]
gi|397742682|gb|EJK89900.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
Length = 714
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 175/515 (33%), Positives = 269/515 (52%), Gaps = 35/515 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
MMLT K ++ +A GLVD VV L+ A + AL RP + +++ P
Sbjct: 167 MMLTGKQLRPRQALKAGLVDEVVPQAILLQAAVELAL----KGRPTSREVPVRERVLAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
LG +F+F Q +++ +P V + VVE G+ G +G +EA F +L S
Sbjct: 223 LGR-HLLFQFVGKQTQRKTQG-NYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSP 280
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVIL 175
++L IFFA K PG P ++ VA+LGGGLMG GIA PV +
Sbjct: 281 QSQALRSIFFASTDLKKDPGAE---AGPGSLRSVAVLGGGLMGGGIAYVTACKGGLPVRI 337
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ + + + L +V++ ++ + ++ ++L++G DY+ F D+VIEA+
Sbjct: 338 KDIQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVF 397
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E+++LKQ++ +++E+Y P I ASNTS++ + I +++G HFFSP MPL+
Sbjct: 398 EDLALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLV 457
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++ T PQ I ++ + K+ KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 458 EVIPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIE 517
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIE----NFPER-TYKSMIIPIMQEDK 410
+ID A+ KFG P+GP +L D VG I TG + I F ER + + II + +D
Sbjct: 518 VIDNALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEGAFGERFSPPANIIDAILKDD 573
Query: 411 RAGETTRKGFYLYDERRKAS---PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
R G +GFYLY+ + + S PDP V + R S +LS + + E
Sbjct: 574 RKGRKNNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQS---------RLSAQQVAERCV 624
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E I A D DI +V G+GFPP+
Sbjct: 625 MMMLNEAARCFDEQIIRSARDGDIGAVFGIGFPPF 659
>gi|417861123|ref|ZP_12506178.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Agrobacterium tumefaciens F2]
gi|338821527|gb|EGP55496.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Agrobacterium tumefaciens F2]
Length = 681
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 162/505 (32%), Positives = 256/505 (50%), Gaps = 19/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + PV ++A LGL+DAV+ + L + A +A + P + +E G
Sbjct: 150 LVTSGSPVGAKKARDLGLIDAVI-DSDLRAGAIAFAKSVAGDPLPQPISSRAVPAVE-TG 207
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
K A+AR++ L EA + E E F +L S +
Sbjct: 208 FWESAEKAVAAKARREVAPLRAFASVRKASEAEFADA----MAFERETFLELRGSSQAAA 263
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L H+FFA+R + P ++ G+ PR ++ A++GGG MG+GIA AL+ + PV L E +
Sbjct: 264 LRHVFFAERAAPRPPELS--GITPRDIRSAAVIGGGTMGAGIAAALLDAGLPVTLIERDT 321
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+E G+ +R+ + VK+G++T++ ++ + +TG DY D D+VIEA+ E++++
Sbjct: 322 AAVERGLANIRSIFEGSVKRGRITKDVADQRTASVTGSDDYGLLADTDLVIEAVFEDLAV 381
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K+ +F L C P +LA+NTS +D + I E +R +G HFFSPAHVM LLEIV T
Sbjct: 382 KRAVFEKLSDICRPDAVLATNTSYLDPDAISEGVRQPERFLGLHFFSPAHVMKLLEIVPT 441
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TSP+V+ + + + K P+ G C GF NR+ A L+ G +D A
Sbjct: 442 ATTSPEVLATGFALARLLGKIPVRAGICDGFIGNRILKVTRAQAERLLLSGATPSAVDAA 501
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
+ FG+PMGPF DL G IA + T +++ + +R G+ + G+
Sbjct: 502 MRAFGLPMGPFEAQDLGGLD--IAAFQRKAARARGETPFALVADRLCAIERFGQKSGGGW 559
Query: 421 YLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKL-SEKDIVEMIFFPVVNEACRVF 478
Y Y R P V I A M G + ++ E I + I P+VNEA R+
Sbjct: 560 YDYLPGDRAPKPSETVAAII--AEEMGG-----RTQRVWDEASIADAIILPMVNEAMRIL 612
Query: 479 AEGIAVKAADLDIASVMGMGFPPYR 503
E IA+++AD+D+ + G GFP +R
Sbjct: 613 EEHIALRSADIDLVKIHGYGFPRWR 637
>gi|152971261|ref|YP_001336370.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|166972673|sp|A6TC19.1|FADJ_KLEP7 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|150956110|gb|ABR78140.1| bifunctional fatty acid oxidation complex protein: putative
enoyl-CoA hydratase/isomerase/putative NAD(P)-binding
dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
Length = 714
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 175/515 (33%), Positives = 269/515 (52%), Gaps = 35/515 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
MMLT K ++ +A GLVD VV L+ A + AL RP + +++ P
Sbjct: 167 MMLTGKQLRPRQALKAGLVDEVVPQAILLQAAVELAL----KGRPTSREVPVRERVLAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
LG +F+F Q +++ +P V + VVE G+ G +G +EA F +L S
Sbjct: 223 LGR-HLLFQFVGKQTQRKTQG-NYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSP 280
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVIL 175
++L IFFA K PG P ++ VA+LGGGLMG GIA PV +
Sbjct: 281 QSQALRSIFFASTDLKKDPGAE---AGPGSLRSVAVLGGGLMGGGIAYVTACKGGLPVRI 337
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ + + + L +V++ ++ + ++ ++L++G DY+ F D+VIEA+
Sbjct: 338 KDIQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVF 397
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E+++LKQ++ +++E+Y P I ASNTS++ + I +++G HFFSP MPL+
Sbjct: 398 EDLALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLV 457
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++ T PQ I ++ + K+ KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 458 EMIPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIE 517
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDK 410
+ID A+ KFG P+GP +L D VG I TG + I F ER + + II + +D
Sbjct: 518 VIDNALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLESAFGERFSPPANIIDAILKDD 573
Query: 411 RAGETTRKGFYLYDERRKAS---PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
R G +GFYLY+ + + S PDP V + R S +LS + + E
Sbjct: 574 RKGRKNNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQS---------RLSAQQVAERCV 624
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E I A D DI +V G+GFPP+
Sbjct: 625 MMMLNEAARCFDEQIIRSARDGDIGAVFGIGFPPF 659
>gi|330503668|ref|YP_004380537.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas mendocina NK-01]
gi|328917954|gb|AEB58785.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Pseudomonas
mendocina NK-01]
Length = 693
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 260/523 (49%), Gaps = 27/523 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+++ KP+K +A LGLVD +++ + A Q A + R+ YK K PL
Sbjct: 156 MIVSGKPIKAAKALELGLVDHLLSAS---DEAEQQAEALAFARQ------YKGGK-RPL- 204
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRA-------GLQKEAEDFQKLL 113
AR + +A R +A L + A + KE F L
Sbjct: 205 SARPVAAEDKAALRTRAQKLIAAARGLPAAAVAAEVVLAADEMSFAQAIGKERAAFLALR 264
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
S+ ++L ++FFA+R +P R +++VA++G G MGSGIA + + V
Sbjct: 265 GSQPAQALRYLFFAERAEPYIPAQPT---EARMLERVAVIGAGTMGSGIALCALQAGCTV 321
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
L E+N + L AG+ R+ L V++ +++ +K + ++ LT D ++ D+VIEA
Sbjct: 322 DLLELNAQALAAGVKRIEDELARDVERQRLSADKRDAILARLTASQDIQTVAKADLVIEA 381
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
IIE+++ KQ +F L +LA+NTS +D++ I E +R++G HFFSPAH M
Sbjct: 382 IIEDMAAKQALFQQLAAQVSSDTLLATNTSYLDIDAIAEGISHPERVLGLHFFSPAHRMA 441
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
LLE+VR T Q + L +++KK IVVGN GF NR++ Y + ++E G
Sbjct: 442 LLEVVRGRSTGEQALCAALKCAERLKKKAIVVGNAWGFVGNRLYAAYRRQCEFMLEEGAS 501
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAG 413
ID A+ ++G MGPF++AD+ G +A Q R Y I ++ E R G
Sbjct: 502 PEQIDAALEQYGFAMGPFKVADMSGLDIAWRMRQQTAATRHLRRYVG-IPDLLCEAGRLG 560
Query: 414 ETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
T KG+Y Y E K D V + I R G ID + S+++I + ++NE
Sbjct: 561 RKTAKGYYRYGEDNKPQTDSAVAEIIAGYRREQG--IDAR--AFSDEEIQQRAVLALINE 616
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYR-FVTFIHRGFSKS 515
A + A+G+ + D+DIA V G GFP +R FI R S
Sbjct: 617 ALLLLAQGVCQRPEDIDIALVHGYGFPRWRGGPVFIARSMGSS 659
>gi|425082566|ref|ZP_18485663.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|428936275|ref|ZP_19009694.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae JHCK1]
gi|405600818|gb|EKB73983.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|426298678|gb|EKV61066.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae JHCK1]
Length = 714
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 175/515 (33%), Positives = 269/515 (52%), Gaps = 35/515 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
MMLT K ++ +A GLVD VV L+ A + AL RP + +++ P
Sbjct: 167 MMLTGKQLRPRQALKAGLVDEVVPQAILLQAAVELAL----KGRPTSREVSVRERVLAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
LG +F+F Q +++ +P V + VVE G+ G +G +EA F +L S
Sbjct: 223 LGR-HLLFQFVGKQTQRKTQG-NYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSP 280
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVIL 175
++L IFFA K PG P ++ VA+LGGGLMG GIA PV +
Sbjct: 281 QSQALRSIFFASTDLKKDPGAE---AGPGPLRSVAVLGGGLMGGGIAYVTACKGGLPVRI 337
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ + + + L +V++ ++ + ++ ++L++G DY+ F D+VIEA+
Sbjct: 338 KDIQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVF 397
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E+++LKQ++ +++E+Y P I ASNTS++ + I +++G HFFSP MPL+
Sbjct: 398 EDLALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLV 457
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++ T PQ I ++ + K+ KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 458 EVIPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIE 517
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIE----NFPER-TYKSMIIPIMQEDK 410
+ID A+ KFG P+GP +L D VG I TG + I F ER + + II + +D
Sbjct: 518 VIDNALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEGAFGERFSPPANIIDAILKDD 573
Query: 411 RAGETTRKGFYLYDERRKAS---PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
R G +GFYLY+ + + S PDP V + R S +LS + + E
Sbjct: 574 RKGRKNNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQS---------RLSAQQVAERCV 624
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E I A D DI +V G+GFPP+
Sbjct: 625 MMMLNEAARCFDEQIIRSARDGDIGAVFGIGFPPF 659
>gi|42523321|ref|NP_968701.1| fatty oxidation complex, alpha subunit [Bdellovibrio bacteriovorus
HD100]
gi|39575527|emb|CAE79694.1| fatty oxidation complex, alpha subunit [Bdellovibrio bacteriovorus
HD100]
Length = 717
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 259/512 (50%), Gaps = 17/512 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDIL----EHRRPWVATLYKTDKI 56
++L K V ++A +GLVD VV PN L S + +WA +I+ + RR + I
Sbjct: 165 IILAGKSVNSKKALKIGLVDKVVHPNLLESFSLKWAKEIIADGAKKRRKTFKPQGAVNVI 224
Query: 57 EPLGEAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGV-VSGPRAGLQKEAEDFQKLL 113
R I FK AR K + P+ ++V++ +S A L+ E E F KL
Sbjct: 225 LESALGRSIVFKKAREGVLKATKGHYPAPLQALEVIQKTYGMSDRDAALRIEREGFCKLG 284
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
++ K+L+H+F+ K GV + + PR VK + +LG G MG GIA V
Sbjct: 285 VTDISKNLIHVFYLTEMVKKQNGVPGVDVKPRDVKGLGVLGAGTMGGGIAYVAADKGIQV 344
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
+K++N L G+ VK+ + + +F++ + L++ DY FK++D+V+EA
Sbjct: 345 RMKDLNTDALGKGLKHASDLWMKLVKRKSIDKYQFQQKMDLVSVSTDYAGFKNLDVVVEA 404
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
I+E++ +KQ++ + P I+A+NTS++ + + + + G HFF+P + MP
Sbjct: 405 IVEDMGIKQKVIGECAGQMRPDAIIATNTSSLSVTEMAKGHPRPEYFAGMHFFNPVNKMP 464
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R +TS + I + ++ KK+ K P+VV + GF VNR+ PY A L++ G
Sbjct: 465 LIEVIRGEKTSDETIATIYELSKKMGKMPVVVKDGPGFLVNRLLLPYMGEAAFLLQEGMS 524
Query: 354 LYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRA 412
+ +D+ K FGMPMGPF L D VG V + F + F ER + + + R
Sbjct: 525 IEFVDKVYVKEFGMPMGPFELMDEVGLDVCLKVLKIFKKAFGERIELAPCMEALGNSGRL 584
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G KGFY Y E K V + + A + G +P K+ +E F ++N
Sbjct: 585 GRKNGKGFYTYSEDGKRGA---VDQTVYAALGL-GQPTNP----YDSKECIERGVFAMIN 636
Query: 473 EACRVFAEGIAVKAA-DLDIASVMGMGFPPYR 503
E E V+ ++D+A +MG GFPP+R
Sbjct: 637 ECSLALVEDRIVETPHEVDLAMIMGTGFPPFR 668
>gi|418023763|ref|ZP_12662747.1| Fatty acid oxidation complex subunit alpha [Shewanella baltica
OS625]
gi|353536636|gb|EHC06194.1| Fatty acid oxidation complex subunit alpha [Shewanella baltica
OS625]
Length = 706
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 258/506 (50%), Gaps = 16/506 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL +P +L +E
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRAPKPVKKSLV-NQVLEGTS 223
Query: 61 EAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I F A Q K+ N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQATKQVEKKTQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G +PR+VKK ILGGGLMG GIA+ + PV +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GASPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++EK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 342 ISEKGLSNALAYAYKLLDKGVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ ++ I E + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLSDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-AIDPKFAKLSEKDIVEMIFFPVVNEACR 476
KGFY Y K + K +++ S+ GV I P K K + E ++NEA R
Sbjct: 582 KGFYQYGASSKKA------KAVDE--SVYGVLGIKPGTNK-DAKAVAERCVVQMLNEAVR 632
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPY 502
+GI D DI ++ G+GFPP+
Sbjct: 633 CLEDGIIASPRDGDIGAIFGIGFPPF 658
>gi|426403796|ref|YP_007022767.1| fatty oxidation complex subunit alpha [Bdellovibrio bacteriovorus
str. Tiberius]
gi|425860464|gb|AFY01500.1| fatty oxidation complex, alpha subunit [Bdellovibrio bacteriovorus
str. Tiberius]
Length = 717
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 259/512 (50%), Gaps = 17/512 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDIL----EHRRPWVATLYKTDKI 56
++L K V ++A LGLVD VV N L S + +WA +I+ + RR + I
Sbjct: 165 IILAGKSVNSKKALKLGLVDKVVHANLLESFSLKWAKEIIADGAKKRRKTFKPQGAVNVI 224
Query: 57 EPLGEAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGV-VSGPRAGLQKEAEDFQKLL 113
R I FK AR K + P+ ++V++ +S A L+ E E F KL
Sbjct: 225 LESALGRSIVFKKAREGVLKATKGHYPAPLQALEVIQKTYGMSDRDAALRVEREGFCKLG 284
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
++ K+L+H+F+ K GVT + + PR VK + +LG G MG GIA V
Sbjct: 285 VTDISKNLIHVFYLTEMVKKQNGVTGVDVKPRDVKGLGVLGAGTMGGGIAYVAADKGIQV 344
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
+K++N L G+ VK+ + + +F++ + L++ DY FK++D+V+EA
Sbjct: 345 RMKDLNTDALGKGLKHASDLWMKLVKRKSIDKYQFQQKMDLVSVSTDYAGFKNLDVVVEA 404
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
I+E++ +KQ++ + P I+A+NTS++ + + + + G HFF+P + MP
Sbjct: 405 IVEDMGVKQKVIGECAGQMRPDAIIATNTSSLSVTEMAKGHPRPEYFAGMHFFNPVNKMP 464
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R +TS + I + ++ KK+ K P+VV + GF VNR+ PY A L++ G
Sbjct: 465 LIEVIRGEKTSDETIATIYELSKKMGKMPVVVKDGPGFLVNRLLLPYMGEAAFLLQEGMS 524
Query: 354 LYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRA 412
+ +D+ K FGMPMGPF L D VG V + F + F ER + + + R
Sbjct: 525 IEFVDKVYVKEFGMPMGPFELMDEVGLDVCLKVLKIFKKAFGERIELAACMEALGNSGRL 584
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G KGFY Y E K V + + A + G +P K+ +E F ++N
Sbjct: 585 GRKNGKGFYTYGEDGKRGA---VDQTVYAALGL-GQPTNP----YDGKECIERGVFAMIN 636
Query: 473 EACRVFAEGIAVKAA-DLDIASVMGMGFPPYR 503
E E V+ ++D+A +MG GFPP+R
Sbjct: 637 ECSLALVEDRIVETPHEVDLAMIMGTGFPPFR 668
>gi|422023968|ref|ZP_16370469.1| multifunctional fatty acid oxidation complex subunit alpha
[Providencia sneebia DSM 19967]
gi|414091368|gb|EKT53053.1| multifunctional fatty acid oxidation complex subunit alpha
[Providencia sneebia DSM 19967]
Length = 730
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 272/542 (50%), Gaps = 34/542 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKT 53
++ K V EA LGL+DA+V +QL + +A A++ + R P + L
Sbjct: 166 IITAGKDVSSPEALKLGLIDAIVETSQLAEAALALIESAISGAINWQQRRSPKLNPL--- 222
Query: 54 DKIEPLGEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKL 112
++ P+ +A F A+ K A + P+V ++ +E L+ E F L
Sbjct: 223 -QLSPIEQAMS-FNVAKGMVYKVAGKHYPAPMVAVNTIEKAANCARNEALKHETAAFVPL 280
Query: 113 LRSETCKSLVHIFFAQ---RGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILS 169
++ ++LV IF + TSK L + A+LG G+MG GIA
Sbjct: 281 AHTDVARALVSIFLNDQYIKATSK-----QLARHVEAPQHAAVLGAGIMGGGIAYQSASK 335
Query: 170 NYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDM 229
PV +K++N+K L+ GI L + ++G++ K K ++ + L Y ++ +
Sbjct: 336 GVPVFMKDINDKSLDLGIEEAHKLLNGQFERGRINASKMAKVLASIHPSLSYSGIENSQI 395
Query: 230 VIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPA 289
V+EA++EN +K + A++EKY P I+ASNTSTI ++ + + + G HFF+P
Sbjct: 396 VVEAVVENPKIKSSVLAEVEKYVEPETIIASNTSTIPISELAKSLQRPENFCGMHFFNPV 455
Query: 290 HVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVE 349
H MPL+E++R TS I ++ K+ KTPIVV +C GF VNR+ FPY A LLV+
Sbjct: 456 HRMPLVEVIRGKLTSDDTIAKVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAAFNLLVQ 515
Query: 350 RGTDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIM 406
G D ID+ + K FG PMGP L D+VG + FPER K+ I ++
Sbjct: 516 DGADFREIDKVMEKEFGWPMGPAYLLDVVGIDTGFHAEQVMAQGFPERMAKNSKNAIDVL 575
Query: 407 QEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMI 466
E++R G+ KGFY Y++ +K P ++ S AI + ++++I+ +
Sbjct: 576 FENQRFGQKNGKGFYQYEKDKKGKPKKIDDPTTDELLS----AIRKEKRSFTKEEIISRM 631
Query: 467 FFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIH------RGFSKSSSCFK 520
P++NE R E I AD DIA V G+GFPP+R F + + + K++ F
Sbjct: 632 MIPMINEVVRCLEERIIDSPADADIALVYGLGFPPFRGGAFRYLDTLGTQSYVKTAEAFT 691
Query: 521 NL 522
+L
Sbjct: 692 HL 693
>gi|146293555|ref|YP_001183979.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella putrefaciens CN-32]
gi|172046869|sp|A4Y897.1|FADJ_SHEPC RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|145565245|gb|ABP76180.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Shewanella putrefaciens CN-32]
Length = 706
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 174/507 (34%), Positives = 257/507 (50%), Gaps = 18/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL +P +L +E
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRAPKPIKKSLV-NQVLEGTS 223
Query: 61 EAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I F A Q K+ N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQATKQVEKKTQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G PR+VKK ILGGGLMG GIA+ + PV +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++EK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 342 ISEKGLSNALAYAYKLLDKGVKRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ ++ I E + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKISPILDKELGERFKAPAAFDKLLGDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KGFY Y K + K E + G+ + + L+E+ +V+M+ NEA
Sbjct: 582 KGFYQYGASSK-----KTKAVDETVYGVLGIKPSTNKDAKALAERCVVQML-----NEAV 631
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
R EGI D DI ++ G+GFPP+
Sbjct: 632 RCLDEGIIASPRDGDIGAIFGIGFPPF 658
>gi|440899525|gb|ELR50818.1| Peroxisomal bifunctional enzyme [Bos grunniens mutus]
Length = 723
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 261/522 (50%), Gaps = 31/522 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL---VSTARQWALDILEHRRPWVATLYKTDKIE 57
++++ + + EA LG++D +V + + + A++ + E RR + + +
Sbjct: 151 LIISGRHISANEALKLGIIDKIVNSDPIEESIKFAQRISDQSPESRR--ICNM----PVP 204
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
L IF A Q RK+ P P C+ V+A V G +KE E L S
Sbjct: 205 SLPNMDAIFSEALLQVRKRYPGWLSPEACVQAVQAAVQYPYDMGSKKEKELGLYLNTSGQ 264
Query: 118 CKSLVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
K+L ++FFA+R +K G + R + V +LG G MG GI + + PVI
Sbjct: 265 AKALQYVFFAERMANKWSTPSGASWKTALGRPISSVGVLGLGTMGRGIVISFAKAQIPVI 324
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
E ++K LE + + L+ K + + + LT + + VD+V+EA+
Sbjct: 325 AVESDKKQLETASKIITSILEKEASKMQQSGRPWSGPKPRLTTSM--KELSGVDLVVEAV 382
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E+++LK+ +FA+L C P +L +NTS +D++ I + ++G HFFSPAHVM L
Sbjct: 383 YEDMNLKKHVFAELSAVCKPEALLCTNTSALDIDEIASSSDRPHLVIGTHFFSPAHVMKL 442
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++++ KKIKK +VVGNC GF NRM Y + L+E G+
Sbjct: 443 LEVIPSRFSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLRSYYDQTYFLLEEGSKP 502
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPERT---YKSMIIP 404
ID + +FG MGPFR++DL G + TG R + IP
Sbjct: 503 EEIDEVLEEFGFKMGPFRVSDLAGLDIGWKSRKRQGLTGPTLPPGSSARKRGGRRYCPIP 562
Query: 405 -IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+YLYD+ R PDP + +F+ + R I P+ +S +
Sbjct: 563 DMLCESGRFGQKTGKGWYLYDKPLGRIHKPDPWLSQFLTQYRET--YHIKPRI--ISWDE 618
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
I+E + ++NEA R+ EG+A +D+ + G G+P +R
Sbjct: 619 ILERCLYSLINEAFRILGEGMATIPEHIDVIYLHGYGWPRHR 660
>gi|262374000|ref|ZP_06067277.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter junii
SH205]
gi|262311011|gb|EEY92098.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter junii
SH205]
Length = 717
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 256/514 (49%), Gaps = 23/514 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLY-KTD--KIEP 58
M + P K A G VDAVVA ++L A L R W A K D K+ P
Sbjct: 168 MAMANPKKPAAALKDGAVDAVVAADKLQEAAVDLVKQALAGRLNWKAKRQEKLDAIKLNP 227
Query: 59 LGEAREIFKFARAQ--ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
L E F A+ A+ P + +D ++AG L+ EA+ F K +
Sbjct: 228 L-EQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGANLTRNDALKAEAQGFAKAAITP 286
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+L+ +F + K + G P V + A+LG G+MG GIA P+I+K
Sbjct: 287 QAGALIGLFINDQVVKKTAKKYEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMK 344
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ L G+ L +V++ KM + +T++ + L Y+ FK+VD+VIEA+ E
Sbjct: 345 DIGNPQLALGMKEANGLLTKQVERNKMKPAQMGETLARIRPTLSYDEFKEVDIVIEAVTE 404
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K+ + AD EK + I+ASNTSTI + + + + VG HFF+P H+MPL+E
Sbjct: 405 NPKVKEIVLADTEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVE 464
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D
Sbjct: 465 VIRGEKTSDEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQ 524
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAG 413
+D + KFG PMGP L D+VG + E FP+R YK I M E KR G
Sbjct: 525 VDNVMAKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IQAMYEAKRLG 583
Query: 414 ETTRKGFYLY--DERRKASP--DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+ GFY Y D++ K + DP + I + DP ++I++ +
Sbjct: 584 QKNDVGFYKYVLDKKGKKAKTVDPTAYEIIAPFVTGEKREFDP-------QEIIDRMMLA 636
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE R + I A++ D+A +MG+GFPP+R
Sbjct: 637 FCNETVRCLEDNIVATASEADMAMIMGVGFPPFR 670
>gi|227327318|ref|ZP_03831342.1| multifunctional fatty acid oxidation complex subunit alpha
[Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 729
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 257/519 (49%), Gaps = 32/519 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K + +A +GLV AVVA ++LV A + + W A Y+ K++PL
Sbjct: 166 IIAAGKDISAADALKVGLVQAVVANDKLVPAAIKMLKQAINGSLDWQA--YRRPKLDPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+A + A + P++ + +EA LQ E + F +L RS
Sbjct: 224 LNKIEAMMSFTTAKAMVLQTAGKHYPAPMLAVKTIEAAATMTRDDALQLETQHFVQLARS 283
Query: 116 ETCKSLVHIF----FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNY 171
++LV IF + + K+ G T + ++ A+LG G+MG GIA
Sbjct: 284 NEARALVGIFLNDQYVKGKAKKLIGETSVP------QQAAVLGAGIMGGGIAYQSAFKGV 337
Query: 172 PVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVI 231
P+ +K++NEK L G+ L ++++GK+ K ++ + LDY F+ D+V+
Sbjct: 338 PIRMKDINEKPLALGMNEAAKLLNKQMERGKLDGMKMATILASIQPTLDYAGFERTDIVV 397
Query: 232 EAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHV 291
EA++EN +K + A+ E + ILASNTSTI + + G HFF+P H
Sbjct: 398 EAVVENPKIKASVLAETESHVSEKTILASNTSTIPIASLAASLKRPQNFCGMHFFNPVHR 457
Query: 292 MPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERG 351
MPL+EI+R +TS I ++ K+ KTPIVV +C GF VNR+ FPY A LL+ G
Sbjct: 458 MPLVEIIRGPKTSDNTIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDG 517
Query: 352 TDLYLIDRAI-TKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQE 408
D ID + KFG PMGP L D+VG A E FP+R K I ++ E
Sbjct: 518 ADFREIDNVMEKKFGWPMGPAYLLDVVGIDTAHHAQAVMAEGFPQRMAKDYRDAIDVLFE 577
Query: 409 DKRAGETTRKGFYLYDERRKA----SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVE 464
+R G+ GFY Y K D V+ ++ +R PK A S ++I+
Sbjct: 578 HQRFGQKNGHGFYRYQTDSKGKLRKEQDEAVETLLKDSRQ-------PKKA-FSAEEIIA 629
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ P++NE R EGI A+ D+A V G+GFPP+
Sbjct: 630 RMMIPMINEVARCLEEGIVASPAEADMALVYGLGFPPFH 668
>gi|50119168|ref|YP_048335.1| multifunctional fatty acid oxidation complex subunit alpha
[Pectobacterium atrosepticum SCRI1043]
gi|81646562|sp|Q6DAP5.1|FADB_ERWCT RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|49609694|emb|CAG73127.1| fatty oxidation complex alpha subunit [includes: enoyl-CoA
hydratase; delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase; 3-hydroxyacyl-CoA dehydrogenase;
3-hydroxybutyryl-CoA epimerase] [Pectobacterium
atrosepticum SCRI1043]
Length = 729
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 175/519 (33%), Positives = 262/519 (50%), Gaps = 32/519 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKT 53
++ K V +A +GLV AVVA +L+ A + LD L +RRP + L K
Sbjct: 166 IIAAGKDVSAADALKVGLVQAVVANEKLIPAAIKMLKQAINGELDWLGYRRPKLEAL-KL 224
Query: 54 DKIEPLGEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKL 112
+KIE A F A+A + A + P++ + +EA LQ E + F +L
Sbjct: 225 NKIE----AMMSFTTAKAMVLQTAGKHYPAPMLAVKTIEAAATMTRDEALQLETQHFVQL 280
Query: 113 LRSETCKSLVHIF----FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL 168
RS ++LV IF + + K+ G T + ++ A+LG G+MG GIA
Sbjct: 281 ARSNEARALVGIFLNDQYVKGKAKKLVGETPVP------QQAAVLGAGIMGGGIAYQSAF 334
Query: 169 SNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVD 228
P+ +K++NEK L G+ L ++++GK+ K ++ + LDY F+ D
Sbjct: 335 KGVPIRMKDINEKPLALGMNEAAKLLNKQMERGKLDGMKMATILANIHPTLDYAGFERTD 394
Query: 229 MVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSP 288
+V+EA++EN +K + A+ E + ILASNTSTI + ++ G HFF+P
Sbjct: 395 IVVEAVVENPKIKASVLAETESHISESTILASNTSTIPIAVLAAALKRPQNFCGMHFFNP 454
Query: 289 AHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLV 348
H MPL+EI+R +TS I ++ K+ KTPIVV +C GF VNR+ FPY A LL+
Sbjct: 455 VHRMPLVEIIRGPKTSDSTIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLL 514
Query: 349 ERGTDLYLIDRAI-TKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPI 405
G D ID A+ KFG PMGP L D+VG A E FP+R K I +
Sbjct: 515 RDGADFREIDNAMEKKFGWPMGPAYLLDVVGIDTAHHAQAVMAEGFPQRMAKDYRDAIDV 574
Query: 406 MQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEK-ARSMSGVAIDPKFAKLSEKDIVE 464
+ E +R G+ +GFY Y K E ++ +++S PK A S ++I+
Sbjct: 575 LFEHQRFGQKNGQGFYRYQTDSKGKQRKEQDDAVDALLKNIS----QPKKA-FSAEEIIA 629
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ P++NE R EGI A+ D+A V G+GFPP+
Sbjct: 630 RMMIPMINEVARCLEEGIVASPAEADMALVYGLGFPPFH 668
>gi|352106919|ref|ZP_08961679.1| multifunctional fatty acid oxidation complex subunit alpha
[Halomonas sp. HAL1]
gi|350597515|gb|EHA13650.1| multifunctional fatty acid oxidation complex subunit alpha
[Halomonas sp. HAL1]
Length = 728
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 260/512 (50%), Gaps = 35/512 (6%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTARQWALDILEH----------RRPWVATLYKTDKIEP 58
+ + A +G VDAVV+ QL ALDIL+ RR + K + IE
Sbjct: 179 RADAALKVGAVDAVVSAEQL----EDAALDILDRANAGELDYQARRAEKTSPLKLNPIE- 233
Query: 59 LGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQK--EAEDFQKLL 113
++ F A+ A K P+ P+ I V++ G +G G + EA+ F KL
Sbjct: 234 -----QMMAFETAKGYVAGKAGPHYPAPVEAIKVIQKG--AGEERGRAQAIEAKAFAKLA 286
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
S +LV +F + K + P VK+ A+LG G+MG GIA P+
Sbjct: 287 LSSVAFNLVGLFLNDQVVKKKASNYEKQAQP--VKQTAVLGAGIMGGGIAYQSASKGTPI 344
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
++K++ + +E G+ R +V++ K+T E+ + ++ + L Y F +VD+V+EA
Sbjct: 345 LMKDIKDDAIELGLKEARKLFAKQVERKKLTTEQMAEKLTNIRPTLSYGDFGNVDLVVEA 404
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
++EN +K + ++E + IL SNTSTI +N + + + G HFF+P H MP
Sbjct: 405 VVENPKVKDAVLTEVEGMVGENTILTSNTSTISINRLAQNLKRPENFCGMHFFNPVHRMP 464
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R +TS + + + + KTPIVV +C GF VNR+ FPY LVE+G D
Sbjct: 465 LVEVIRGEKTSDVAVAATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSFLVEQGAD 524
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKR 411
+D+ + KFG PMGP L D+VG A+ E FP+R + I +M ++ R
Sbjct: 525 FQRVDKVMEKFGWPMGPAYLLDVVGLDTAVHANEVMAEGFPDRMAREGKTAIQVMYDNDR 584
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ KGFY Y+E +K P KK ++A + + + S++DI+ + P+
Sbjct: 585 LGQKNDKGFYAYEEDKKGKP----KKVTDEAAYALVKEVVKEHKEFSDEDIIARMMVPLC 640
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI A+ D+A + G+GFPP+R
Sbjct: 641 LETVRCLEDGIVATPAEADMALIYGIGFPPFR 672
>gi|416245836|ref|ZP_11634731.1| multifunctional fatty acid oxidation complex subunit alpha
[Moraxella catarrhalis BC8]
gi|326571923|gb|EGE21928.1| multifunctional fatty acid oxidation complex subunit alpha
[Moraxella catarrhalis BC8]
Length = 717
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 248/507 (48%), Gaps = 14/507 (2%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K + +EA LGLVDAVVA L A L + W A + L +
Sbjct: 172 TGKAYRPDEALKLGLVDAVVADELLEQAAADLVKKCLLGKFDWQAKRQEKQVPVKLNQLE 231
Query: 64 EIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+ F A+ A+ + + ++ +E + EA+ F K +
Sbjct: 232 QAMAFNSAKGVIFAKANPKHYPAVAIALETIEKHANLNRDDAIALEAKGFTKAATTPQAA 291
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+LV +F + K+ + +K+ A+LG G+MG GIA + P+I+K++
Sbjct: 292 ALVGLFLNDQTVKKL--AKKHSQNAQTIKQAAVLGAGIMGGGIAYQAAVKGLPIIMKDIQ 349
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
K L+ G+ L V +GK T K +T+S + L+Y F +VD+VIEA++EN +
Sbjct: 350 AKQLDLGMNEAGKLLSKEVLRGKSTPAKMAQTLSHIRPTLNYGDFGEVDIVIEAVVENPT 409
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+ + +++E P ILASNTSTI + + + VG HFF+P H MPL+E++R
Sbjct: 410 IKEAVLSEVESLVKPETILASNTSTISITRLANALKRPENFVGMHFFNPVHRMPLVEVIR 469
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+TS I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D ID+
Sbjct: 470 GEKTSDIAIATTVALAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKEGADFVSIDK 529
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETT 416
+ KFG PMGP L D+VG + E FP+R YK +M E +R G+
Sbjct: 530 TMEKFGWPMGPAYLLDVVGMDTGVHAAKVMAEGFPDRMKPDYKGA-TQLMFEHERLGQKN 588
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
GFY Y+ ++ P KK + + E++I++ + NE R
Sbjct: 589 GVGFYQYETDKRGKP----KKIADSTTYELLNLVQTGDQTFDEQEIIDRMMIAFCNETVR 644
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ I A+ D+A +MG+GFPP+R
Sbjct: 645 CLEDNIVASPAEADMAMIMGVGFPPFR 671
>gi|256823193|ref|YP_003147156.1| fatty acid oxidation complex subunit alpha FadJ [Kangiella
koreensis DSM 16069]
gi|256796732|gb|ACV27388.1| fatty acid oxidation complex, alpha subunit FadJ [Kangiella
koreensis DSM 16069]
Length = 715
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 266/514 (51%), Gaps = 22/514 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHR---RPWVATLYKTDKIE 57
MMLT K + ++A LGLVD VV L+ A + ++ + R +PW L E
Sbjct: 166 MMLTGKQLFPKQAKKLGLVDEVVPAANLMKAAYRRLHELRKDRSKKKPWTYYLSLAGIKE 225
Query: 58 PLGEAREIFK-FARAQARKQAP-----NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQK 111
L EA + + QARK N P I+ VE G G AGL EA++F +
Sbjct: 226 LLLEANPLGRNLVFNQARKTVDSKTKGNYPAPHKIIECVEKGYSQGFDAGLAIEAKNFGQ 285
Query: 112 LLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSN 170
L+ + K+L+ IFFA K GV D + V KV +LGGGLMGSGIA ++ +
Sbjct: 286 LVVTPEAKALISIFFATTELKKDKGV-DGDVEAITVDKVGVLGGGLMGSGIAYVSVDKAG 344
Query: 171 YPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMV 230
V +K+V+ K + + + ++K+ ++ +S LTG DY+ FKD DMV
Sbjct: 345 KQVRVKDVSAKGVNGALNYSWKIISKKMKRRIISPSDARNAMSFLTGSTDYKGFKDCDMV 404
Query: 231 IEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAH 290
IEA+ E++ LK Q+ D+E+ C I A+NTS+I ++ I E + +VG H+FSP
Sbjct: 405 IEAVFEDLDLKHQMVKDVEENCSEKTIFATNTSSIPISKIAEGAKRPEHVVGLHYFSPVE 464
Query: 291 VMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVER 350
MPLLEI++T++T+ VI + +GK+ KTPIVV + GF VNR+ PY A +L+
Sbjct: 465 KMPLLEIIKTDKTADWVIATCVALGKQQGKTPIVVNDGAGFYVNRILAPYVNEAGILLSE 524
Query: 351 GTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDK 410
G + +D+A+ K G P+GP L D VG VA + F ER + +D
Sbjct: 525 GVAIEKLDKAMVKAGFPVGPITLLDEVGIDVATKVAPILQDAFGERMEPPKAFSKLLDDD 584
Query: 411 RAGETTRKGFYLYDER-RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
R G +GFY Y + +K D V + + ++P ++S +I E
Sbjct: 585 RKGRKNNRGFYQYPAKGKKKQVDESVYRVL---------GVEPG-KEVSSAEIAERGMLL 634
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ NEA R EG+ A D D+ ++ G+GFPP++
Sbjct: 635 MANEAARCLDEGVIRSARDGDVGAIFGIGFPPFQ 668
>gi|206576247|ref|YP_002237269.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae 342]
gi|254788651|sp|B5XVW2.1|FADJ_KLEP3 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|206565305|gb|ACI07081.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
342]
Length = 714
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 172/515 (33%), Positives = 269/515 (52%), Gaps = 35/515 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
MMLT + ++ +A GLVD VV L+ A + AL RP + +++ P
Sbjct: 167 MMLTGRQLRARQALKAGLVDEVVPQAILLQAAVELAL----KGRPASRDMPVRERVLAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
LG +F F Q +++ +P V + VVE G+ G +G +EA F +L +
Sbjct: 223 LGR-HLLFHFVGKQTQRKTQG-NYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMTP 280
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVIL 175
++L IFFA K G P + +A+LGGGLMG GIA PV +
Sbjct: 281 QSQALRSIFFASTDLKKDRGAE---AEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRI 337
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ + + + L +V++ ++ + ++ +++++G DY+ F D+VIEA+
Sbjct: 338 KDIQPRGINHALKYSWDLLNKQVRQRRLRPSERDRQMAMISGATDYQGFAHRDVVIEAVF 397
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E+++LKQ++ +++E+YC P I ASNTS++ + I + R++G HFFSP MPL+
Sbjct: 398 EDLALKQRMVSEVEQYCGPQTIFASNTSSLPIGDIAAQARRPGRVIGLHFFSPVEKMPLV 457
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++ T PQ I ++ + K+ KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 458 EVIPHKGTDPQAIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVE 517
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDK 410
ID+A+ KFG P+GP +L D VG I TG + I F ER + + II + +D
Sbjct: 518 EIDKALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLESAFGERFSSPANIIDAILKDD 573
Query: 411 RAGETTRKGFYLYDERRKAS---PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
R G +GFYLY+ + + S PDP V + ID ++LS + + E
Sbjct: 574 RKGRKNNRGFYLYETKGRKSKKRPDPAVYPLL---------GIDRPQSRLSAQQVAERCV 624
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E I A D DI +V G+GFPP+
Sbjct: 625 MMMLNEAARCFDEQIIRSARDGDIGAVFGIGFPPF 659
>gi|425075588|ref|ZP_18478691.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425086224|ref|ZP_18489317.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|449060359|ref|ZP_21738019.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae hvKP1]
gi|405593988|gb|EKB67411.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405605139|gb|EKB78205.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|448873926|gb|EMB08993.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae hvKP1]
Length = 714
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 175/515 (33%), Positives = 269/515 (52%), Gaps = 35/515 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
MMLT K ++ +A GLVD VV L+ A + AL RP + +++ P
Sbjct: 167 MMLTGKQLRPRQALKAGLVDEVVPQAILLQAAVELAL----KGRPTSREVPVRERVLAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
LG +F+F Q +++ +P V + VVE G+ G +G +EA F +L S
Sbjct: 223 LGR-HLLFQFVGKQTQRKTQG-NYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSP 280
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVIL 175
++L IFFA K PG P ++ VA+LGGGLMG GIA PV +
Sbjct: 281 QSQALRSIFFASTDLKKDPGAE---AGPGPLRSVAVLGGGLMGGGIAYVTACKGGLPVRI 337
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ + + + L +V++ ++ + ++ ++L++G DY+ F D+VIEA+
Sbjct: 338 KDIQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVF 397
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E+++LKQ++ +++E+Y P I ASNTS++ + I +++G HFFSP MPL+
Sbjct: 398 EDLALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLV 457
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++ T PQ I ++ + K+ KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 458 EVIPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIE 517
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIE----NFPER-TYKSMIIPIMQEDK 410
+ID A+ KFG P+GP +L D VG I TG + I F ER + + II + +D
Sbjct: 518 VIDNALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEGAFGERFSPPANIIDAILKDD 573
Query: 411 RAGETTRKGFYLYDERRKAS---PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
R G +GFYLY+ + + S PDP V + R S +LS + + E
Sbjct: 574 RKGRKNNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQS---------RLSAQQVAERCV 624
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E I A D DI +V G+GFPP+
Sbjct: 625 MMMLNEAARCFDEQIIRSARDGDIGAVFGIGFPPF 659
>gi|120598367|ref|YP_962941.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella sp. W3-18-1]
gi|171704620|sp|A1RI92.1|FADJ_SHESW RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|120558460|gb|ABM24387.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Shewanella sp. W3-18-1]
Length = 706
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 256/507 (50%), Gaps = 18/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL +P +L +E
Sbjct: 165 MMLTGKQIRSKQALKMGLVNDVVPQTILLQTAVEMALTGKRAPKPVKKSLV-NQVLEGTS 223
Query: 61 EAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I F A Q K+ N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQATKQVEKKTQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G PR+VKK ILGGGLMG GIA+ + PV +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++EK L + L VK+ MT + ++L+T +Y+ KD D+++EA+ E+
Sbjct: 342 ISEKGLSNALAYAYKLLDKGVKRRHMTPAARDNLMALMTTTTEYKGVKDADIIVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ ++ I E + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLGDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KGFY Y K + K E + G+ + L+E+ +V+M+ NEA
Sbjct: 582 KGFYQYGASSK-----KTKAVDETVYGVLGIKPGTNKDAKALAERCVVQML-----NEAV 631
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
R +GI D DI ++ G+GFPP+
Sbjct: 632 RCLDDGIIASPRDGDIGAIFGIGFPPF 658
>gi|126174967|ref|YP_001051116.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella baltica OS155]
gi|386341719|ref|YP_006038085.1| fatty acid oxidation complex subunit FadJ [Shewanella baltica
OS117]
gi|171769977|sp|A3D684.1|FADJ_SHEB5 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|125998172|gb|ABN62247.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Shewanella baltica OS155]
gi|334864120|gb|AEH14591.1| fatty acid oxidation complex, alpha subunit FadJ [Shewanella
baltica OS117]
Length = 706
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 173/507 (34%), Positives = 257/507 (50%), Gaps = 18/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL +P +L +E
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRAPKPVKKSLV-NQVLEGTS 223
Query: 61 EAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I F A Q K+ N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQATKQVEKKTQGNYPAPAKIIDCVRQGITKGMQKGLEVEASHFAELVVSKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G +PR+VKK ILGGGLMG GIA+ + PV +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GASPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++EK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 342 ISEKGLSNALAYAYKLLDKGVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ ++ I E + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLGDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KGFY Y K + K E + G+ + L+E+ +V+M+ NEA
Sbjct: 582 KGFYQYGASSK-----KAKAVDESVYGVLGIKPGTNKDAKALAERCVVQML-----NEAV 631
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
R +GI D DI ++ G+GFPP+
Sbjct: 632 RCLDDGIIASPRDGDIGAIFGIGFPPF 658
>gi|372271057|ref|ZP_09507105.1| multifunctional fatty acid oxidation complex subunit alpha
[Marinobacterium stanieri S30]
Length = 715
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 153/509 (30%), Positives = 256/509 (50%), Gaps = 29/509 (5%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLY-----KTDKIEP--LGE 61
+ + A ++G VDA+V P L R ALD+L R VA + +T+K P L +
Sbjct: 175 RAKNALAVGAVDAIVEPELL----RDGALDLL---RRCVAGEFDYQARRTEKQSPIKLNQ 227
Query: 62 AREIFKFARAQA---RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
++ F A+ K P+ P+ + ++ EA+ F KL +E
Sbjct: 228 IEQMMAFESAKGMIGTKAGPHYPAPMAALASIQKHANMTRDDAQAVEAKGFAKLATNEVT 287
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+LV +F + + + P V++ A+LG G+MG G+A P+++K++
Sbjct: 288 PALVGLFLKDQQIKRTSKRYEADAEP--VRQAAVLGAGIMGGGVAYQSASRGTPILMKDI 345
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+E L+ G+ ++++GK+ K ++S + L Y F +VD+V+EA++EN
Sbjct: 346 SEDALQLGLSEASKLFNKQLERGKIDGRKLATSLSRIRPTLSYGDFGNVDLVVEAVVENP 405
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+KQ + A++E IL SNTSTI + + + + G HFF+P H MPL+E++
Sbjct: 406 KIKQSVLAEVETQLQEGAILTSNTSTISITELAKALKKPENFCGMHFFNPVHQMPLVEVI 465
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R ++S I + K + KTPIVV +C GF VNR+ FPY L+ G D +D
Sbjct: 466 RGEKSSEAAIGRTVAYAKAMGKTPIVVNDCPGFLVNRILFPYFAGFTGLLRDGADYRQVD 525
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK--SMIIPIMQEDKRAGETT 416
+ + +FG PMGP L D+VG A G + FP+R +I + +++R G+
Sbjct: 526 KVMERFGWPMGPAFLLDVVGIDTAKHAGAVMADGFPDRMRNEGETVIDRLYKEQRLGQKN 585
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARS--MSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
KGFY Y+ RK P KK +++ + GV + P + +++I+ + P+ E+
Sbjct: 586 GKGFYRYEPDRKGKP----KKLVDEELPALLDGV-VGPA-REFRDEEIIARMMIPLCIES 639
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI A++D+ V G+G PP+R
Sbjct: 640 VRCLEDGIVETPAEVDMGLVYGIGLPPFR 668
>gi|421779134|ref|ZP_16215628.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase FadB [Moraxella
catarrhalis RH4]
gi|407813575|gb|EKF84355.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase FadB [Moraxella
catarrhalis RH4]
Length = 717
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 248/507 (48%), Gaps = 14/507 (2%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K + +EA LGLVDAVVA L A L + W A + L +
Sbjct: 172 TGKAYRPDEALKLGLVDAVVADELLEQAAADLVKKCLLGKFDWQAKRQEKQVPVKLNQLE 231
Query: 64 EIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
+ F A+ A+ + + ++ +E + EA+ F K +
Sbjct: 232 QAMAFNSAKGVIFAKANPKHYPAVAIALETIEKHANLNRDDAIALEAKGFTKAATTPQAA 291
Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVN 179
+LV +F + K+ + +K+ A+LG G+MG GIA + P+I+K++
Sbjct: 292 ALVGLFLNDQTVKKL--AKKHSQNAQTIKQAAVLGAGIMGGGIAYQAAVKGLPIIMKDIQ 349
Query: 180 EKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVS 239
K L+ G+ L V +GK T K +T+S + L+Y F +VD+VIEA++EN +
Sbjct: 350 AKQLDLGMNEAGKLLSKEVLRGKSTPAKMAQTLSHIRPTLNYGDFGEVDIVIEAVVENPT 409
Query: 240 LKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVR 299
+K+ + +++E P ILASNTSTI + + + VG HFF+P H MPL+E++R
Sbjct: 410 IKEAVLSEVESLVKPETILASNTSTISITRLANALKRPENFVGMHFFNPVHRMPLVEVIR 469
Query: 300 TNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDR 359
+TS I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D ID+
Sbjct: 470 GEKTSDIAIATTVALAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKEGADFVSIDK 529
Query: 360 AITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETT 416
+ KFG PMGP L D+VG + E FP+R YK +M E +R G+
Sbjct: 530 TMEKFGWPMGPAYLLDVVGMDTGVHAAKVMAEGFPDRMKPDYKGA-TQLMFEHERLGQKN 588
Query: 417 RKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
GFY Y+ ++ P KK + + E++I++ + NE R
Sbjct: 589 GVGFYQYETDKRGKP----KKIADSTTYELLNLVQTGDQTFDEQEIIDRMMIAFCNETVR 644
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
+ I A+ D+A +MG+GFPP+R
Sbjct: 645 CLEDNIVASPAEADMAMIMGVGFPPFR 671
>gi|387903389|ref|YP_006333728.1| enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
gi|387578281|gb|AFJ86997.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
Length = 711
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 265/507 (52%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + EEA +LGLVD V +Q ++ +A +++ P + +T + L
Sbjct: 162 LMLTGRHASAEEARALGLVDRVARSDQTLAEGLAYAQELVSLGAP----VRRTRDAQGLA 217
Query: 61 E---AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
E A+ ARA+ K++ L P +D VEA + AG++ E F + L S
Sbjct: 218 ERTAAQAALAAARAELPKKSRGLFSPAKIVDAVEAALTLSFDAGMKLERSLFLQCLDSPQ 277
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
LVH FFA+R +K P + R V++V ++GGG MG+GIA A + + PV + E
Sbjct: 278 RAGLVHAFFAEREAAKAPEARRA--SARAVERVGVVGGGTMGAGIAVAALDAGLPVTMIE 335
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ L G V + V KG+MT + ++ G Y++ D+VIEA+ E+
Sbjct: 336 RDDASLARGRAHVEKVYDALVAKGRMTPDARAARVARFDGSTRYDALAQADVVIEAVFED 395
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++KQ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA+VM LLEI
Sbjct: 396 MAVKQAVFAELARVCKPGAVLATNTSYLDIDALAAGIDRPADVIGLHFFSPANVMKLLEI 455
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + S +V+ + +++KKTP+ G C GF NR+ Y AA L+E G Y I
Sbjct: 456 VVPKRVSAEVVATAFALARQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQI 515
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+ FG PMGPF++ DL G + AT + R I + E G+ +
Sbjct: 516 DRAVRDFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKSG 575
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+G+YLY D R +PDPEV + R+ G+ P+ S+ +I+ ++NE
Sbjct: 576 RGYYLYPDGARVGTPDPEVDAIVAAERAKKGIV--PR--SFSDDEILRRYLAAMINEGAN 631
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V E IA++ D+D + G GFP +R
Sbjct: 632 VVHERIALRPLDVDAVFLYGYGFPRHR 658
>gi|254516745|ref|ZP_05128804.1| fatty oxidation complex, alpha subunit FadB [gamma proteobacterium
NOR5-3]
gi|219675168|gb|EED31535.1| fatty oxidation complex, alpha subunit FadB [gamma proteobacterium
NOR5-3]
Length = 715
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 260/516 (50%), Gaps = 20/516 (3%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTD 54
M T K EA G VDA+ AP QL + +A L+I E RR ++ +
Sbjct: 168 MATGKEQSAAEALKAGAVDAIAAPEQLHNVAMTTLESAIAGKLNI-EGRRSAKSSPLPLN 226
Query: 55 KIEPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLR 114
E + F A++ N PI ++V+EA G L+ E+ F +L +
Sbjct: 227 DTEAM---MAFFTIKSMVAQQAGKNYPAPIKVVEVIEAARGMGLEDALKVESAGFAELAK 283
Query: 115 SETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++ ++V +F + +K + A + +++ A+LG G+MG GIA L P+
Sbjct: 284 TDVAAAMVGLFLNDQLLAKTAKAWEKK-ADKPIERAAVLGAGIMGGGIAYQSSLKGVPIK 342
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K++ ++ L+ G+ L RV +G+MT +K + ++ + L YE F VD+V+EA+
Sbjct: 343 MKDIAQEGLDLGLSEANKLLSKRVSRGRMTADKMGEVLNNIDPTLTYEGFDTVDIVVEAV 402
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
+EN +K + A+ EK+ P +LASNTSTI ++ + + + G HFF+P H MPL
Sbjct: 403 VENPKVKHAVLAETEKHISPDAVLASNTSTISIDFLAQALERPENFCGMHFFNPVHAMPL 462
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+E++R +TS I + ++ K +VV +C GF VNR+ FPY LV G D
Sbjct: 463 VEVIRGAKTSDTAIARTVAYANRMGKKAVVVNDCPGFLVNRVLFPYFDGFSKLVRDGADF 522
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKR 411
+D+ + ++G PMGP L+D+VG + E FP+R +K+ M E+ R
Sbjct: 523 QAVDKVMERWGWPMGPAYLSDVVGIDTGVHAAGVMAEGFPDRMKMDFKTA-TETMFENNR 581
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ KGFY Y ++ P V + E ++ + + K + ++I+ + P+
Sbjct: 582 LGQKNGKGFYEYVMDKRGKPKKTVSQ--ETYELLAPITAERK--EFDREEIIARMMLPMC 637
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI AA+ D+A + G+GFPP+R F
Sbjct: 638 TELARCVEEGIVGSAAEADLALLYGIGFPPFRGGVF 673
>gi|405354533|ref|ZP_11023894.1| Enoyl-CoA hydratase [Chondromyces apiculatus DSM 436]
gi|397092248|gb|EJJ23022.1| Enoyl-CoA hydratase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 746
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 177/567 (31%), Positives = 274/567 (48%), Gaps = 56/567 (9%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQL----VSTARQWA-------------------- 36
++LT K +K +A LG+VD VV L V A++ A
Sbjct: 173 LILTGKSLKPAKAKKLGVVDEVVPVPILRDIAVRRAKELAEGKLKVERRHGQGFKGVARG 232
Query: 37 ---------LDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQA-RKQAPNLTHPIVC 86
L L ++ W + + PLG + +F AR Q +K P
Sbjct: 233 GKAKGLAGFLQGLANKELWAEVALEDN---PLGR-KVLFDQARKQLLKKTRGKFPAPEKA 288
Query: 87 IDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRR 146
+ V+ G+ SG +AG + EA+ F +L+ S+ K LV IFFA K G ++ PR
Sbjct: 289 LQVIRVGLESGHKAGQEAEAKAFGELVVSDVSKRLVEIFFATTALKKENGTSNPDAKPRE 348
Query: 147 VKKVAILGGGLMGSGIA-TALILSNYPVILKEVNEKFLEAGIGRVRANLQS----RVKKG 201
VKKVA+LGGGLMG GIA A +L PV +K+ ++ AG+GR +Q+ RVK+
Sbjct: 349 VKKVAVLGGGLMGGGIAYVASVLQGVPVRVKDKDD----AGVGRAMKQVQTILDERVKRR 404
Query: 202 KMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASN 261
+T+ + +++T DY FK D+VIEA+ E++ LK ++ A++E I ASN
Sbjct: 405 SLTRREATAKSAVVTAGTDYSGFKSADLVIEAVFEDLKLKHRVIAEVEAVTGEQTIFASN 464
Query: 262 TSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKT 321
TS++ + + + + +++G H+FSP H MPLLEI+ T V +++G+K KT
Sbjct: 465 TSSLPITDLAKGSRRPGQVIGMHYFSPVHKMPLLEIITHAGTEDWVTATCVEVGRKQGKT 524
Query: 322 PIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGV 381
IVV + GF +R+ PY A L+ G D+ +D+A+ +FG P+GP L D VG V
Sbjct: 525 VIVVNDGPGFYTSRILAPYMNEAAYLLGEGADIAELDKALVEFGFPVGPITLLDEVGIDV 584
Query: 382 AIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEK 441
A G F +R + + D R G + KGFYLY++ +K DP + +
Sbjct: 585 AQKVGPIMEAAFGKRMAAPKALEKVVADGRLGRKSEKGFYLYEDGKKQDVDPSIYALLPH 644
Query: 442 ARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPP 501
++ E + +VNEA R EGI A D D+ ++ G+GFPP
Sbjct: 645 GTERR---------SFDRAEMAERVVLQMVNEAIRCLGEGILRSARDGDVGAIFGLGFPP 695
Query: 502 YRFVTFIHRGFSKSSSCFKNLLCYFDQ 528
+ F + + + L + D+
Sbjct: 696 FLGGPFHYVDSRGPAEVLRKLEHFHDK 722
>gi|288934205|ref|YP_003438264.1| fatty acid oxidation complex subunit alpha FadJ [Klebsiella
variicola At-22]
gi|288888934|gb|ADC57252.1| fatty acid oxidation complex, alpha subunit FadJ [Klebsiella
variicola At-22]
Length = 714
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 172/515 (33%), Positives = 269/515 (52%), Gaps = 35/515 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
MMLT + ++ +A GLVD VV L+ A + AL RP + +++ P
Sbjct: 167 MMLTGRQLRARQALKAGLVDEVVPQAILLQAAVELAL----KGRPASRDMPVRERVLAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
LG +F F Q +++ +P V + VVE G+ G +G +EA F +L +
Sbjct: 223 LGR-HLLFHFVGKQTQRKTQG-NYPAVKRILQVVENGLTHGCSSGYAEEARAFGELAMTP 280
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVIL 175
++L IFFA K G P + +A+LGGGLMG GIA PV +
Sbjct: 281 QSQALRSIFFASTDLKKDRGAE---AEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRI 337
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ + + + L +V++ ++ + ++ +++++G DY+ F D+VIEA+
Sbjct: 338 KDIQPRGINHALKYSWELLNKQVRQRRLRPSERDRQMAMISGATDYQGFAHRDVVIEAVF 397
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E+++LKQ++ +++E+YC P I ASNTS++ + I + R++G HFFSP MPL+
Sbjct: 398 EDLALKQRMVSEVEQYCGPQTIFASNTSSLPIGDIAAQARRPGRVIGLHFFSPVEKMPLV 457
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++ T PQ I ++ + K+ KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 458 EVIPHKGTDPQAIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVE 517
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDK 410
ID+A+ KFG P+GP +L D VG I TG + I F ER + + II + +D
Sbjct: 518 EIDKALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLERAFGERFSPPANIIDAILKDD 573
Query: 411 RAGETTRKGFYLYDERRKAS---PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
R G +GFYLY+ + + S PDP V + ID ++LS + + E
Sbjct: 574 RKGRKNNRGFYLYETKGRKSKKRPDPAVYPLL---------GIDRPQSRLSAQQVAERCV 624
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E I A D DI +V G+GFPP+
Sbjct: 625 MMMLNEAARCFDEQIIRSARDGDIGAVFGIGFPPF 659
>gi|197334151|ref|YP_002154796.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
fischeri MJ11]
gi|254788583|sp|B5FEW8.1|FADB_VIBFM RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|197315641|gb|ACH65088.1| fatty oxidation complex, alpha subunit FadB [Vibrio fischeri MJ11]
Length = 725
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 164/515 (31%), Positives = 262/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ T KP + ++A +LG++D VV+ L++ + + + W + +T K PL
Sbjct: 166 VITTGKPKRAKDALALGMIDGVVSRETLITDSVTMLKKAIGGQLDWQSR--RTQKKAPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ K A + P+ + +E A L+ E ++F L ++
Sbjct: 224 LSPLEAAMSFNVAKGMIMKMAGKHYPAPMTAVKSIENSAFMDRDAALEVENKNFVALTQT 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+ KSLV IF + P V A+LG G+MG GIA PV++
Sbjct: 284 DVAKSLVGIFLNDQLVKSKAKQAIKNSEP--VTSAAVLGAGIMGGGIAYQSASKGVPVLM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ ++ L+ G+ L ++++G+++ K + +S +T L+Y S ++ D+V+EA++
Sbjct: 342 KDIAQQSLDLGMNEASKLLNKQLERGRLSGLKMAQVLSSITPSLNYASIENKDIVVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E H ILASNTSTI ++L+ + + G HFF+P H MPL+
Sbjct: 402 ENPKIKAAVLAEVENEVNEHAILASNTSTIPISLLAKSLKRPENFCGMHFFNPVHRMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++R +TS Q I ++ ++ KTPIVV +C GF VNR+ FPY LL+ G D
Sbjct: 462 EVIRGEKTSQQTIDRVVAYASQMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGGDYQ 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A + FPER K+ +I M E R
Sbjct: 522 QIDKVMEKEFGWPMGPAYLLDVVGIDTAHHAQAVMAQGFPERMAKNGRDVIDAMFESDRY 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ GFY Y RK P KK I+++ + + + + I + P++N
Sbjct: 582 GQKNGSGFYAYSIDRKGKP----KKNIDESTAGIIATVTNTTQPYTSEQISARMMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI A+ D+A V G+GFPP++ F
Sbjct: 638 EVIRCLDEGIIASPAEADMALVYGLGFPPFKGGVF 672
>gi|432936067|ref|XP_004082104.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Oryzias latipes]
Length = 763
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 253/532 (47%), Gaps = 37/532 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAP-NQLVSTARQWALDILEHRRPWVATLYKTDKIEPL 59
MMLT + ++ ++A +GLV ++ P + + + ++ LE A KI
Sbjct: 200 MMLTGRNIRADKAKKMGLVHQLIDPLGPGLKSPEERTIEYLEEVAVECAKGIVNKKIALH 259
Query: 60 GEA-----------------REIFKFARAQARKQAPNL-THPIVCIDVVEAGVVSGPRAG 101
E +I+K +++ KQ+ L P+ I+ V+ GV GP AG
Sbjct: 260 KEKSMMQKIQDYVMSFEFVRNQIYKTVQSKVMKQSKGLYPAPLKIIECVKVGVEQGPVAG 319
Query: 102 LQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSG 161
E+++F +L R+ +L+ ++ Q K G R VK +AILG GLMG+G
Sbjct: 320 YLAESQNFGQLARTSESAALIGLYHGQVACKK----NRFGTPEREVKTLAILGAGLMGAG 375
Query: 162 IATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDY 221
IA + ILK+ + L G +V L + KK +T + + T+S LTG LDY
Sbjct: 376 IAQVTVDKGVHTILKDTTQAGLARGEQQVYKGLNDKTKKRSITSFERDATLSNLTGTLDY 435
Query: 222 ESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIV 281
F+ DMVIEA+ E++S+K + ++E PPHCI ASNTS + + I + D++V
Sbjct: 436 RGFEKADMVIEAVFEDISIKHAVLKEVEAVVPPHCIFASNTSALPIKEIAAASKRPDKVV 495
Query: 282 GAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYT 341
G H+FSP M LLEI+ T +TS + +G K K IVVG+ GF R P
Sbjct: 496 GMHYFSPVDKMQLLEIITTEKTSKDTTASAVAVGLKQGKVIIVVGDGPGFYTTRCLAPML 555
Query: 342 QAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYK 399
A +++ G D +D T FG P+G LAD VG VA + F R
Sbjct: 556 AEAVRVLQEGVDPKKLDALTTSFGFPVGAATLADEVGIDVAAHVAEDLGKAFGSRFGGGN 615
Query: 400 SMIIPIMQEDKRAGETTRKGFYLYDERRKASP-DPEVKKFIEKARSMSGVAIDPKFAKLS 458
++ M + G + KG Y+Y K +P++ + +E+ R + PK S
Sbjct: 616 VEVLKTMVDMGFKGRKSGKGCYIYQPGTKVKEVNPDIGEILERFR------MTPKPDVSS 669
Query: 459 EKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFP-----PYRFV 505
+ D+ + VNEA EG+ + DI +V G+GFP P+RFV
Sbjct: 670 DSDVQHRLVSRFVNEAVLCLQEGVLNSPLEGDIGAVFGLGFPPCHGGPFRFV 721
>gi|373950109|ref|ZP_09610070.1| Fatty acid oxidation complex subunit alpha [Shewanella baltica
OS183]
gi|386324057|ref|YP_006020174.1| Fatty acid oxidation complex subunit alpha [Shewanella baltica
BA175]
gi|333818202|gb|AEG10868.1| Fatty acid oxidation complex subunit alpha [Shewanella baltica
BA175]
gi|373886709|gb|EHQ15601.1| Fatty acid oxidation complex subunit alpha [Shewanella baltica
OS183]
Length = 706
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 258/506 (50%), Gaps = 16/506 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL +P +L +E
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRAPKPVKKSLV-NQVLEGTS 223
Query: 61 EAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I F A Q K+ N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQATKQVEKKTQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G +PR+VKK ILGGGLMG GIA+ + PV +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GASPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++EK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 342 ISEKGLSNALAYAYKLLDKGVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ ++ I E + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLGDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-AIDPKFAKLSEKDIVEMIFFPVVNEACR 476
KGFY Y K + K +++ S+ GV I P K K + E ++NEA R
Sbjct: 582 KGFYQYGASSKKA------KAVDE--SVYGVLGIKPGTNK-DAKAVAERCVVQMLNEAVR 632
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPY 502
+GI D DI ++ G+GFPP+
Sbjct: 633 CLEDGIIASPRDGDIGAIFGIGFPPF 658
>gi|343511646|ref|ZP_08748801.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
scophthalmi LMG 19158]
gi|342797381|gb|EGU33031.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
scophthalmi LMG 19158]
Length = 723
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 162/515 (31%), Positives = 256/515 (49%), Gaps = 25/515 (4%)
Query: 6 KPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREI 65
K + EEA +GL+DA+V QL +A + + W A + L + +
Sbjct: 171 KACRAEEALKVGLLDAIVDSEQLHESALTTLKQAINEKIDWQARRRQKTSALTLSKLEAM 230
Query: 66 FKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLV 122
F A+ A+K P+ P+ + +E G + L E + F KL +SE K+LV
Sbjct: 231 MSFTTAKGLVAQKAGPHYPAPMTAVTAIEEGARAERNDALDIERKHFVKLAKSEEAKALV 290
Query: 123 HIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKF 182
+F + + + +A + ++ A+LG G+MG GIA L PV++K++ +
Sbjct: 291 GLFLNDQYIKSLAKQS-AKVANKETQRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQSS 349
Query: 183 LEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQ 242
L+ G+ L R+ +G++ K ++ +T L Y DVD+V+EA++EN +K
Sbjct: 350 LDLGMSEASKLLNKRLSRGRIDGFKMAGILASITPSLHYAGIDDVDIVVEAVVENPKIKA 409
Query: 243 QIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQ 302
+ +++E+Y ++ SNTSTI +NL+ + D+ G HFF+P H MPL+EI+R
Sbjct: 410 AVLSEVEQYVSDDSVITSNTSTIPINLLAKSLQRPDKFCGMHFFNPVHRMPLVEIIRGEH 469
Query: 303 TSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAIT 362
TS + I ++ K+ K+PIVV +C GF VNR+ FPY LL+ G D ID+ +
Sbjct: 470 TSEETINRVVAYAAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFTHIDKIME 529
Query: 363 K-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYK--SMIIPIMQEDKRAGETTRKG 419
+ FG PMGP L D+VG A + FPER K + I + R G+ G
Sbjct: 530 RQFGWPMGPAYLLDVVGIDTAHHAQAVMAQGFPERMAKQDNDAIDALFAANRYGQKNGHG 589
Query: 420 FYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLS------EKD-IVEMIFFPVVN 472
FY Y R+ P+ K F E+ I P A + E+D I++ + P++N
Sbjct: 590 FYQYSVDRRGRPN---KAFSEE--------IIPILADVCASQQNFEQDIIIQRMMIPMIN 638
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E +GI + D+A V G+GFPP+R F
Sbjct: 639 EVVLCLEQGIIASPQEADMALVYGLGFPPFRGGVF 673
>gi|300714832|ref|YP_003739635.1| fatty oxidation complex alpha subunit [Erwinia billingiae Eb661]
gi|299060668|emb|CAX57775.1| Fatty oxidation complex alpha subunit [Erwinia billingiae Eb661]
Length = 728
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 261/520 (50%), Gaps = 26/520 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K V ++A ++GLVDAVV +L A + + ++ W A + K+ PL
Sbjct: 166 IIAAGKDVDAQKALAIGLVDAVVPVEKLQQAALAILQEAMSGKQDWRAR--RQPKLAPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A++ + A + P++ + +EA G A L+ E + F L RS
Sbjct: 224 LSKIEATMSFSIAKSMVLQTAGKHYPAPMMAVKTIEAAAGLGRDAALKLETQAFVPLARS 283
Query: 116 ETCKSLVHIFFAQRGT-SKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVI 174
+ ++LV IF + +K +T P K+ A+LG G+MG GIA PV+
Sbjct: 284 DEARALVGIFLNDQAVKAKAKKLTRDVETP---KQAAVLGAGIMGGGIAYQSASKGVPVM 340
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K++N LE G+ L ++++GK+ K I + LDY F+ D+V+EA+
Sbjct: 341 MKDINPASLELGMKEAAKLLNKQLERGKIDGMKLAGIIGTIQPTLDYAGFERADIVVEAV 400
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
+EN +K + A+ E Y ILASNTSTI ++ + + G HFF+P H MPL
Sbjct: 401 VENPKVKAAVLAETEGYLHSGAILASNTSTIPISQLAHALKRPENFCGMHFFNPVHRMPL 460
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+E++R +TS + ++ K+ KTPIVV +C GF VNR+ FPY LL+ G D
Sbjct: 461 VEVIRGEKTSDATLATVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADF 520
Query: 355 YLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKR 411
ID+ + K FG PMGP L D+VG A M + FP R K I ++ + KR
Sbjct: 521 RQIDKVMEKQFGWPMGPAWLLDVVGIDTAHHAQMVMADGFPSRMKKDYRDAIDVLFDAKR 580
Query: 412 AGETTRKGFYLYDE----RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
G+ + GFY ++ ++K DP V ++ PK S+ +IV +
Sbjct: 581 FGQKNQLGFYRWETDSKGKQKKVADPAVDDLLQ-------TVCQPKRV-FSDDEIVSRMM 632
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
P++NE R EGI A+ D+A V G+GFPP+ F
Sbjct: 633 IPMINEVVRCLEEGIIASPAEADMALVYGLGFPPFHGGAF 672
>gi|322831930|ref|YP_004211957.1| fatty acid oxidation complex, subunit alpha FadJ [Rahnella sp.
Y9602]
gi|384257038|ref|YP_005400972.1| multifunctional fatty acid oxidation complex subunit alpha
[Rahnella aquatilis HX2]
gi|321167131|gb|ADW72830.1| fatty acid oxidation complex, alpha subunit FadJ [Rahnella sp.
Y9602]
gi|380753014|gb|AFE57405.1| multifunctional fatty acid oxidation complex subunit alpha
[Rahnella aquatilis HX2]
Length = 733
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 158/505 (31%), Positives = 258/505 (51%), Gaps = 16/505 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRP--WVATLYKTDKIEP 58
+MLT + V+ ++A +GLVD V + L+ TA + + R P W A L P
Sbjct: 182 LMLTGRSVRAKQALRMGLVDDAVPYSILLQTALERVAKGRKSRPPLPWQARLAGG----P 237
Query: 59 LGEAREIFKFARAQAR-KQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
LG++ +F F R Q + K N IDVV+ G+ G +G Q EA+ F +L+ +
Sbjct: 238 LGKSL-LFHFVRKQTQAKTHGNYPATEKIIDVVKTGLDQGSGSGYQAEAKAFGELVMTPE 296
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+L +FFA K G L RR + G + + + PV +K+
Sbjct: 297 SAALRGLFFASTALKKEKGGDAEPLPVRRAGILGGGLMGGGIANVTATK--AGLPVRIKD 354
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+N + + + L+ +V+ ++T+ + ++ + L++G DY F +D+V+EA+ E+
Sbjct: 355 INHEGIRHALKYSWDLLEKKVRGRRLTRNEQQRQMMLISGTTDYSGFAQIDIVVEAVFED 414
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+ LKQ + A++E+ PH I ASNTS++ ++ I E+ ++++G H+FSP MPL+E+
Sbjct: 415 LLLKQAMVAEIEQNAAPHTIFASNTSSLPIHKIAEQADRPEQVIGLHYFSPVDKMPLVEV 474
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ TS Q I + + +K KT IVVG+ GF VNR+ PY A + G + I
Sbjct: 475 IPHAGTSAQTISTTVSLARKQGKTAIVVGDSAGFYVNRILAPYINEAARCLLAGEPVDHI 534
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ FG P+GP +L D VG V G ++ F ER + +D R G
Sbjct: 535 DKALVNFGFPVGPIQLLDEVGIDVGTKIGPILVDAFGERFAAPSGFDAVLKDDRKGRKNG 594
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
KGFYLY ++ +A+ +V I + + + PK + SE +I ++NEA R
Sbjct: 595 KGFYLYGQKGRATKKKQVDPAIYRL-----LNVTPKVQQ-SEDEIAHRCVMLMLNEAVRC 648
Query: 478 FAEGIAVKAADLDIASVMGMGFPPY 502
E + A D D+ +V G+GFPP+
Sbjct: 649 LDENVIRSARDGDLGAVFGIGFPPF 673
>gi|260550494|ref|ZP_05824704.1| 3-hydroxyacyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
gi|424057202|ref|ZP_17794719.1| fatty acid oxidation complex subunit alpha [Acinetobacter
nosocomialis Ab22222]
gi|260406409|gb|EEW99891.1| 3-hydroxyacyl-CoA dehydrogenase [Acinetobacter sp. RUH2624]
gi|407440735|gb|EKF47252.1| fatty acid oxidation complex subunit alpha [Acinetobacter
nosocomialis Ab22222]
Length = 717
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 160/494 (32%), Positives = 249/494 (50%), Gaps = 13/494 (2%)
Query: 17 GLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQ---- 72
G VDAVVA ++L+ A + R W A + + L ++ F A+
Sbjct: 183 GAVDAVVAADKLLDAATDLVKQAISGRLNWKAKRQEKLEAVKLNPLEQMMAFNTAKGAVL 242
Query: 73 ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTS 132
A+ P + +D ++AG L+ EAE F K + +L+ +F +
Sbjct: 243 AKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAITPQAGALIGLFINDQVVK 302
Query: 133 KVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRA 192
K + G P V + A+LG G+MG GIA P+I+K++ L G+
Sbjct: 303 KASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKDIGNPQLALGMSEANN 360
Query: 193 NLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYC 252
L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN +K+ + A+ EK
Sbjct: 361 LLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTENPKVKEIVLAETEKNV 420
Query: 253 PPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLL 312
+ I+ASNTSTI + + + + VG HFF+P H+MPL+E++R +TS + I +
Sbjct: 421 RENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIATTV 480
Query: 313 DIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFR 372
+ +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D ID ++KFG PMGP
Sbjct: 481 VLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQIDNVMSKFGWPMGPAY 540
Query: 373 LADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETTRKGFYLYDERRKA 429
L D+VG + E FP+R YK I M E KR G+ GFY Y+ +K
Sbjct: 541 LIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGA-IQAMYEAKRLGQKNDVGFYKYELDKKG 599
Query: 430 SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADL 489
+ K A + + + + ++I++ + NE R + I A++
Sbjct: 600 K---KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLAFCNETVRCLEDKIVATASEA 656
Query: 490 DIASVMGMGFPPYR 503
D+A +MG+GFPP+R
Sbjct: 657 DMAMIMGVGFPPFR 670
>gi|83943661|ref|ZP_00956119.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sulfitobacter sp. EE-36]
gi|83845341|gb|EAP83220.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sulfitobacter sp. EE-36]
Length = 698
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 232/408 (56%), Gaps = 16/408 (3%)
Query: 101 GLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGS 160
G+ E + F +L+ ++ + ++H FF++R +P + G+ PR ++ + I+GGG MG+
Sbjct: 245 GMLAERKIFMELMETDQRQGMIHAFFSERAVGNLPELK--GVEPRALQSIGIIGGGTMGA 302
Query: 161 GIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEK-TISLLTGVL 219
GIATA +L+ + V+L E+ E EA GR+ NL +K+GK+TQ K++ T + L +
Sbjct: 303 GIATAALLAGFNVVLIEMKEDAAEAARGRIAGNLSGALKRGKITQMKYDAMTNTALEVSI 362
Query: 220 DYESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDR 279
+Y+S VD+VIEA+ E++ +K+++F L+ C P ILASNTS +D++ I T
Sbjct: 363 NYDSLASVDLVIEAVFEDMGVKKEVFGKLDAVCKPGAILASNTSYLDVDEIAASTSRPAD 422
Query: 280 IVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFP 339
++G HFFSPAH+M LLE+V +T+P V+ +GK + K + G C GF NR+
Sbjct: 423 VIGLHFFSPAHIMKLLEVVVAEKTAPDVVATGFALGKALNKISVRAGVCDGFIGNRILAT 482
Query: 340 YTQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQ--FIENFPER- 396
Y AA +V G + ID+A+ FG MGPF + DL G + AT + + ER
Sbjct: 483 YRTAADHMVLDGASPFQIDKALVDFGFAMGPFAVGDLAGLDIGWATRKRKAATRHPAERV 542
Query: 397 -TYKSMIIPIMQEDKRAGETTRKGFYLYDE-RRKASPDPEVKKFIEKARSMSGVAIDPKF 454
TY I E G+ T KG+Y+Y+ R P+PEV + I R+ G I P+
Sbjct: 543 PTYPDKIC----EAGNFGQKTGKGYYIYEAGSRGGVPNPEVSELIAAERAERG--ITPR- 595
Query: 455 AKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++ +IV +VNEA +V EGIA + D+D+ + G GFP Y
Sbjct: 596 -DFTDAEIVRRYMAAMVNEAAKVVGEGIAKRPLDVDMVLLFGYGFPRY 642
>gi|264677433|ref|YP_003277339.1| 3-hydroxyacyl-CoA dehydrogenase [Comamonas testosteroni CNB-2]
gi|262207945|gb|ACY32043.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni CNB-2]
Length = 719
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 155/509 (30%), Positives = 245/509 (48%), Gaps = 23/509 (4%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
++ K ++ +A GLVD VVAP QL+S A+ W L +PW ++ PL +
Sbjct: 172 LMEGKQLQAVKAREAGLVDEVVAPEQLLSAAKAWLLARPTALQPWDVKGFRIPGGGPL-D 230
Query: 62 AREIFKFARAQARKQAP---NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
AR F QA N+ P+ + G GL+ E++ L RS
Sbjct: 231 ARVAPAFVVGNTMLQAKTFHNMPAPLCIQSCIYEGCQLPIDKGLRIESKYMATLSRSPVA 290
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
+ ++ F + ++ GL P + +K+ ++G G+MG+GIA V+L +
Sbjct: 291 RGMIRTLFVNKAKAEKGMHRPAGLEPFQCRKLGLIGAGMMGAGIALVAAQRGIQVVLIDR 350
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
++ + G L +V KG+ ++EK + ++ +T DYE +D DMV+EA+ E+
Sbjct: 351 DQAAADKGKQYSEKTLARQVDKGRQSREKADAILARITPGTDYELLRDADMVVEAVFEDR 410
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
++K ++ L+ PP C+LASNTS + ++L+ + + DR +G HFFSPA MPL+E++
Sbjct: 411 AIKAEVTRKLDAVLPPGCVLASNTSALPISLLAQASDRPDRFIGLHFFSPADKMPLVEVI 470
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R QTS + LD ++KKTPIVV + GF +R + A +V G LI+
Sbjct: 471 RGKQTSDATLAQALDFVAQLKKTPIVVNDKRGFFTSRFIGAFVDDAIGMVAEGIAPALIE 530
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQ---EDKRAGET 415
GMP+GP + D + ++ G + FPE +P++ E R G
Sbjct: 531 NCAKHAGMPVGPLAITDELSIDLSKHAGESQAKEFPEEYKPGRSVPVIGKLFELGRLGRK 590
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVA--IDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY YDE K R G+A K + S D+ + I + E
Sbjct: 591 VGKGFYDYDESGK--------------RIWPGLAEHYPLKATQPSAHDLKQRILYVQAVE 636
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPY 502
R EG+ + AD DI S++G+GFP Y
Sbjct: 637 GARAMEEGVLLAPADGDIGSILGVGFPVY 665
>gi|425742101|ref|ZP_18860223.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-487]
gi|445437585|ref|ZP_21441134.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC021]
gi|425489002|gb|EKU55325.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-487]
gi|444753621|gb|ELW78260.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii OIFC021]
Length = 717
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 160/494 (32%), Positives = 249/494 (50%), Gaps = 13/494 (2%)
Query: 17 GLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAREIFKFARAQ---- 72
G VDAVVA ++L+ A + R W A + + L ++ F A+
Sbjct: 183 GAVDAVVAADKLLDAATDLVKQAISGRLNWKAKRQEKLEAVKLNPLEQMMAFNTAKGAVL 242
Query: 73 ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVHIFFAQRGTS 132
A+ P + +D ++AG L+ EAE F K + +L+ +F +
Sbjct: 243 AKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAITPQAGALIGLFINDQVVK 302
Query: 133 KVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVRA 192
K + G P V + A+LG G+MG GIA P+I+K++ L G+
Sbjct: 303 KASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKDIGNPQLALGMSEANN 360
Query: 193 NLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQIFADLEKYC 252
L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN +K+ + A+ EK
Sbjct: 361 LLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTENPKVKEIVLAETEKNV 420
Query: 253 PPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLL 312
+ I+ASNTSTI + + + + VG HFF+P H+MPL+E++R +TS + I +
Sbjct: 421 RENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIATTV 480
Query: 313 DIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITKFGMPMGPFR 372
+ +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D ID ++KFG PMGP
Sbjct: 481 VLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQIDNVMSKFGWPMGPAY 540
Query: 373 LADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGETTRKGFYLYDERRKA 429
L D+VG + E FP+R YK I M E KR G+ GFY Y+ +K
Sbjct: 541 LIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGA-IQAMYEAKRLGQKNDVGFYKYELDKKG 599
Query: 430 SPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEGIAVKAADL 489
+ K A + + + + ++I++ + NE R + I A++
Sbjct: 600 K---KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLAFCNETVRCLEDKIVATASEA 656
Query: 490 DIASVMGMGFPPYR 503
D+A +MG+GFPP+R
Sbjct: 657 DMAMIMGVGFPPFR 670
>gi|425746064|ref|ZP_18864096.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-323]
gi|425486713|gb|EKU53078.1| fatty oxidation complex, alpha subunit FadB [Acinetobacter
baumannii WC-323]
Length = 717
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 258/517 (49%), Gaps = 29/517 (5%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLY-KTD--KIEP 58
M + P K A G VDAVVA ++L A + R W A K D K+ P
Sbjct: 168 MAMANPKKPAAALKDGAVDAVVAADKLQEAAVDLVKQAIAGRLNWKAKRQEKLDAIKLNP 227
Query: 59 LGEAREIFKFARAQ--ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
L E F A+ A+ P + +D ++AG S L+ EA+ F K +
Sbjct: 228 L-EQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASSTRDDALKAEAQGFAKAAITP 286
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+L+ +F + K + G P V + A+LG G+MG GIA P+I+K
Sbjct: 287 QAGALIGLFINDQVVKKTAKKYEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMK 344
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ L G+ L +V++ KM + +T++ + L Y+ FK+VD+VIEA+ E
Sbjct: 345 DIGNPQLALGMKEANGLLTKQVERKKMKPAQMGETLARIRPTLSYDEFKEVDIVIEAVTE 404
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K+ + AD EK+ + I+ASNTSTI + + + + VG HFF+P H+MPL+E
Sbjct: 405 NPKVKEIVLADTEKHVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVE 464
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D
Sbjct: 465 VIRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQ 524
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAG 413
+D + KFG PMGP L D+VG + E FP+R YK I M E KR G
Sbjct: 525 VDNVMAKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGS-IEAMYEAKRLG 583
Query: 414 ETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAID-------PKFAKLSEKDIVEMI 466
+ GFY Y +K +KA+++ A D + + ++I++ +
Sbjct: 584 QKNDVGFYKYVLDKKG----------KKAKTVDPTAYDIIAPFVTGEKREFDNQEIIDRM 633
Query: 467 FFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE R + I A++ D+A +MG+GFPP+R
Sbjct: 634 MLAFCNETVRCLEDKIVATASEADMAMIMGVGFPPFR 670
>gi|359395501|ref|ZP_09188553.1| Fatty acid oxidation complex subunit alpha [Halomonas boliviensis
LC1]
gi|357969766|gb|EHJ92213.1| Fatty acid oxidation complex subunit alpha [Halomonas boliviensis
LC1]
Length = 728
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 165/508 (32%), Positives = 260/508 (51%), Gaps = 27/508 (5%)
Query: 9 KGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATL----YKTDKIEPLG---- 60
+ + A +G VDAVV QL + ALDIL+ R L + +K PL
Sbjct: 179 RADAALKVGAVDAVVTAEQL----EEAALDILD--RANAGELDYRARRAEKTSPLLLNPI 232
Query: 61 EAREIFKFARA-QARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQK--EAEDFQKLLRSET 117
E +F+ A+ A K P+ P+ I V++ G +G G + EA+ F KL S
Sbjct: 233 EQMMVFETAKGFVAGKAGPHYPAPVEAIKVIQKG--AGEERGRAQAIEAKAFAKLALSSV 290
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
+LV +F + K G + P VK+ A+LG G+MG GIA P+++K+
Sbjct: 291 AFNLVGLFLNDQVVKKKAGKYEKQAQP--VKQTAVLGAGIMGGGIAYQSASKGTPILMKD 348
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + +E G+ R +V++ K+T E+ + ++ + L Y F +VD+V+EA++EN
Sbjct: 349 IKDDAIELGLKEARKLFAKQVERNKLTTEQMAEKLTNIRPTLSYGDFGNVDLVVEAVVEN 408
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + ++E + IL SNTSTI +N + + + G HFF+P H MPL+E+
Sbjct: 409 PKVKDAVLTEVEGMVGENTILTSNTSTISINRLAQNLKRPENFCGMHFFNPVHRMPLVEV 468
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + + + + KTPIVV +C GF VNR+ FPY LVE+G D +
Sbjct: 469 IRGEKTSDAAVAATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSFLVEQGADFQRV 528
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGET 415
D+ + KFG PMGP L D+VG A+ E FP+R + I +M ++ R G+
Sbjct: 529 DKVMEKFGWPMGPAYLLDVVGLDTAVHANEVMAEGFPDRMAREGKTAIQVMYDNDRLGQK 588
Query: 416 TRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KGFY Y+E +K P KK ++A + + + S++DI+ + P+ E
Sbjct: 589 NDKGFYAYEEDKKGKP----KKVTDEAAYALVKEVVKEHKEFSDEDIIARMMVPLCLETV 644
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYR 503
R +GI A+ D+A + G G PP+R
Sbjct: 645 RCLEDGIVATPAEADMALIYGTGSPPFR 672
>gi|134297067|ref|YP_001120802.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia vietnamiensis G4]
gi|134140224|gb|ABO55967.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia vietnamiensis G4]
Length = 711
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 265/507 (52%), Gaps = 14/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT + EEA +LGLVD V + ++ +A +++ P + +T + L
Sbjct: 162 LMLTGRHASAEEARALGLVDRVARSDDTLAEGLAYAQELVSLGAP----VRRTRDAQGLA 217
Query: 61 E---AREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
E A+ ARA+ K++ L P +D VEA + AG++ E F + L S
Sbjct: 218 ERTAAQAALAAARAELPKKSRGLFSPAKIVDAVEAALTLSFDAGMKLERSLFLQCLDSPQ 277
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
LVH FFA+R +K P + R V++V ++GGG MG+GIA A + + PV + E
Sbjct: 278 RAGLVHAFFAEREAAKAPEARRA--SARAVERVGVVGGGTMGAGIAVAALDAGLPVTMIE 335
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++ L G V + V KG+MT + ++ L G Y++ D+VIEA+ E+
Sbjct: 336 RDDASLARGRAHVEKVYDALVAKGRMTPDARAARVARLDGSTRYDALAQADVVIEAVFED 395
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+++KQ +FA+L + C P +LA+NTS +D++ + ++G HFFSPA+VM LLEI
Sbjct: 396 MAVKQAVFAELARVCKPGAVLATNTSYLDIDALAAGIDRPTDVIGLHFFSPANVMKLLEI 455
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
V + S +V+ + +++KKTP+ G C GF NR+ Y AA L+E G Y I
Sbjct: 456 VVPKRVSAEVVATAFALARQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQI 515
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
DRA+ FG PMGPF++ DL G + AT + R I + E G+ +
Sbjct: 516 DRAVRGFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKSG 575
Query: 418 KGFYLY-DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACR 476
+G+YLY D R +PDPEV + R+ G+ P+ S+ +I+ ++NE
Sbjct: 576 RGYYLYPDGARVGTPDPEVDAIVAAERAKKGIV--PR--SFSDDEILRRYLAAMINEGAN 631
Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYR 503
V E IA++ D+D + G GFP +R
Sbjct: 632 VVHERIALRPLDVDAVFLYGYGFPRHR 658
>gi|307189793|gb|EFN74066.1| Trifunctional enzyme subunit alpha, mitochondrial [Camponotus
floridanus]
Length = 766
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 167/525 (31%), Positives = 258/525 (49%), Gaps = 34/525 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVV--------APNQ-----LVSTARQWALDILE-----H 42
M+LT K V + A GLVD VV P + L TA + A D+
Sbjct: 202 MILTGKTVTADRAKKSGLVDIVVNRLGPGVGTPEENTMRYLEETAVKAAQDLANGKLKVE 261
Query: 43 RRPWVATLYKTDKIEPLGEAR-EIFKFARAQARKQAPNLT-HPIVCIDVVEAGVVSGPRA 100
R P T ++ + +IF A+AQ K L P+ ++VV G+ GP
Sbjct: 262 RGPKSFVDKITQQVLSFNFVKDQIFGRAKAQVMKATGGLYPAPLKILEVVRTGLDKGPVV 321
Query: 101 GLQKEAEDFQKLLRSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGS 160
G + EA+ F +LL + CK L +FF Q K G A KK+A++G GLMG+
Sbjct: 322 GFEAEAKGFGQLLVTPECKGLTSLFFGQTACKK----NRFGSAKSAAKKIAVIGAGLMGA 377
Query: 161 GIATALILSNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLD 220
GI I Y VI+K+ N+ L GIG+++ L S VK+ +++ + +K +S L L+
Sbjct: 378 GIVQVSIDKGYDVIMKDTNQSGLYRGIGQIQKGLDSAVKRKRISSVEKDKYLSHLDATLN 437
Query: 221 YESFKDVDMVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRI 280
Y SFKDVD+VIEA+ E++ +K ++ ++E P HC++A+NTS I + I + D++
Sbjct: 438 YNSFKDVDVVIEAVFEDIGIKHKVLKEIESIVPQHCVIATNTSAIPITKIAAGSSRPDKV 497
Query: 281 VGAHFFSPAHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPY 340
+G H+FSP M LLEI+ TS + I +D+G K K I VG+ GF R+
Sbjct: 498 IGMHYFSPVDKMQLLEIITHKGTSEETIRTAVDVGLKQGKIVITVGDGPGFYTTRILSAM 557
Query: 341 TQAAFLLVERGTDLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS 400
A L++ G D +D+ FG P+G L+D VG V + F ER ++
Sbjct: 558 LSEAIRLMQEGVDPVQLDKLTKAFGFPVGAATLSDEVGIDVGAHISADLDKAFGER-FRG 616
Query: 401 MIIPIMQEDKRAGETTR---KGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKL 457
+ I+ + +AG R KG ++Y+ K + EV + + ++PK +
Sbjct: 617 GDVNILGDMVKAGFLGRKSGKGIFVYEADSK---NREVN--VGALDILKKYTLEPKGSTS 671
Query: 458 SEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
E + M+ VNEA E I + ++ +V G+GFPP+
Sbjct: 672 DEDRQLRMV-SRFVNEAVLCLQENILANPLEGNVGAVFGLGFPPF 715
>gi|359786370|ref|ZP_09289505.1| multifunctional fatty acid oxidation complex subunit alpha
[Halomonas sp. GFAJ-1]
gi|359296220|gb|EHK60473.1| multifunctional fatty acid oxidation complex subunit alpha
[Halomonas sp. GFAJ-1]
Length = 724
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 166/502 (33%), Positives = 261/502 (51%), Gaps = 23/502 (4%)
Query: 13 AHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATL-YKTDKIEP-----LGEAREIF 66
A +G VDAVVA ++L+ A ALDIL+ R L Y+ + E L ++
Sbjct: 183 ALKVGAVDAVVA-HELLEEA---ALDILD--RANAGELDYQARRDEKKAPLNLNAIEQMM 236
Query: 67 KFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F A+ A K P+ P+ I V++ G EA+ F KL S +LV
Sbjct: 237 AFETAKGFVAGKAGPHYPAPVESIKVIQKGAGETRARAQAIEAKAFAKLALSSVAFNLVG 296
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K + P VK+ A+LG G+MG GIA P+++K++NE+ +
Sbjct: 297 LFLNDQVVKKKGSKYEKQSQP--VKQTAVLGAGIMGGGIAYQSASKGTPIVMKDINEEAI 354
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ R +V++ KMT E+ + ++ + L Y F VD+V+EA++EN ++K
Sbjct: 355 ELGLKEARKLFSKQVERKKMTVEQMAEKLTNIRPTLSYGDFDSVDLVVEAVVENPNVKDA 414
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ ++E + IL SNTSTI +N + + + G HFF+P H MPL+E++R +T
Sbjct: 415 VLTEVEGLVSENTILTSNTSTISINRLAKNLKRPENFCGMHFFNPVHRMPLVEVIRGEKT 474
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S + + + + KTPIVV +C GF VNR+ FPY LVE+G D +D+ + K
Sbjct: 475 SDAAVAATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSFLVEQGADFQRVDKVMEK 534
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG A+ E FP+R + I +M ++KR G+ KGFY
Sbjct: 535 FGWPMGPAYLLDVVGLDTAVHANEVMAEGFPDRMARDGKTAIQVMYDNKRLGQKNDKGFY 594
Query: 422 LYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAEG 481
Y+E +K P K E+A ++ + + + +++DI+ + P+ E R +G
Sbjct: 595 AYEEDKKGKPK---KVTDEQAYALVKDVVKEQ-KEFTDEDIIARMMVPLCLETVRCLEDG 650
Query: 482 IAVKAADLDIASVMGMGFPPYR 503
I A+ D+A + G+GFPP+R
Sbjct: 651 IVETPAEADMALIYGIGFPPFR 672
>gi|403056633|ref|YP_006644850.1| fatty acid oxidation complex subunit alpha FadB [Pectobacterium
carotovorum subsp. carotovorum PCC21]
gi|402803959|gb|AFR01597.1| fatty acid oxidation complex alpha subunit FadB [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 729
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 174/521 (33%), Positives = 264/521 (50%), Gaps = 36/521 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKT 53
++ K + +A +GLV AVVA ++LV A + +LD +RRP + L K
Sbjct: 166 IIAAGKDIGATDALKVGLVQAVVANDKLVPAAIKMLKQAINGSLDWQAYRRPKLEAL-KL 224
Query: 54 DKIEPLGEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKL 112
+K+E A F A+A + A + P++ + +EA LQ E + F +L
Sbjct: 225 NKVE----AMMSFTTAKAMVLQTAGKHYPAPMLAVKTIEAAATMTRDDALQLETQHFVQL 280
Query: 113 LRSETCKSLVHIF----FAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL 168
RS ++LV IF + + K+ G T + K+ A+LG G+MG GIA
Sbjct: 281 ARSNEARALVGIFLNDQYVKGKAKKLVGETSVP------KQAAVLGAGIMGGGIAYQSAF 334
Query: 169 SNYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVD 228
P+ +K++NEK L G+ L ++++GK+ K ++ + LDY F+ D
Sbjct: 335 KGVPIRMKDINEKPLALGMNEAAKLLNKQMERGKLDGMKMATILASIQPTLDYVGFERTD 394
Query: 229 MVIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSP 288
+V+EA++EN +K + A+ E + + ILASNTSTI + + G HFF+P
Sbjct: 395 IVVEAVVENPKIKANVLAETESHVSENTILASNTSTIPIASLAASLKRPQNFCGMHFFNP 454
Query: 289 AHVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLV 348
H MPL+EI+R QTS + I ++ K+ KTPIVV +C GF VNR+ FPY A LL+
Sbjct: 455 VHRMPLVEIIRGPQTSDRTIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLL 514
Query: 349 ERGTDLYLIDRAI-TKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPI 405
G D ID + KFG PMGP L D+VG A E FP+R K I +
Sbjct: 515 RDGADFRDIDNVMEKKFGWPMGPAYLLDVVGIDTAHHAQAVMAEGFPQRMAKDYRDAIDV 574
Query: 406 MQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAID---PKFAKLSEKDI 462
+ E +R G+ GFY Y K +++K E+ ++ + D PK S ++I
Sbjct: 575 LFEHQRFGQKNGHGFYRYQTDSKG----KLRK--EQDEAVDAILQDISQPK-KTFSAEEI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ + P++NE R EGI A+ D+A V G+GFPP+
Sbjct: 628 IARMMIPMINEVARCLEEGIVASPAEADMALVYGLGFPPFH 668
>gi|113968364|ref|YP_732157.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella sp. MR-4]
gi|123130893|sp|Q0HPB7.1|FADB_SHESM RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|113883048|gb|ABI37100.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Shewanella sp. MR-4]
Length = 716
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 177/519 (34%), Positives = 259/519 (49%), Gaps = 30/519 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG--- 60
T K + E+A +G VDAVVAP L + A Q D + + W A + K+ PL
Sbjct: 169 TGKDQRPEDALKVGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQAR--RQRKMSPLTLPK 226
Query: 61 -EAREIFKFAR----AQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ A A K P P+ + VVE G LQ E + F KL ++
Sbjct: 227 LEAMMSFTTAKGMVFAVAGKHYP---APMAAVSVVEQAATKGRSDALQIEHQAFIKLAKT 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+ K+L+ IF + G + VK A+LG G+MG GIA P+++
Sbjct: 284 DVAKALIGIFLNDQLVKGK--AKKAGKLAKDVKSAAVLGAGIMGGGIAYQSASKGTPIVM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ + L+ G+G L ++V +G+ T EK K ++ +T LDY K D+V+EA++
Sbjct: 342 KDIAQPALDLGLGEAAKLLSAQVARGRSTPEKMAKVLNNITPALDYAPVKHADVVVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E+ +K Q+ A++E+Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+
Sbjct: 402 EHPKVKAQVLAEVEQYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++R +S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D
Sbjct: 462 EVIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFA 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG E FP+R KS I +M E+KR
Sbjct: 522 AIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGNDAIDVMFENKRL 581
Query: 413 GETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFF 468
G+ KGFY Y + P DP + ++ A +I+
Sbjct: 582 GQKNGKGFYAYSVDSRGKPKKDVDPTSYELLKAAFGEQ--------KAFDADEIIARTMI 633
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
P++ E R EGI A+ D+ V G+GFPP+R F
Sbjct: 634 PMIIETVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>gi|163751144|ref|ZP_02158374.1| fatty oxidation complex, alpha subunit [Shewanella benthica KT99]
gi|161329100|gb|EDQ00172.1| fatty oxidation complex, alpha subunit [Shewanella benthica KT99]
Length = 709
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 172/510 (33%), Positives = 262/510 (51%), Gaps = 21/510 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLVD VV + L++TA + AL + VA K + L
Sbjct: 165 MMLTGKQIRPKQALKMGLVDDVVPESILLATAVKMAL-----KGKRVAKKVKKSLLNKLL 219
Query: 61 EARE-----IFKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLR 114
E IF A Q +++ N P ID V G+ G AGL+ EA F +L+
Sbjct: 220 EGTSFGRNIIFDQAGKQVQQKTQGNYPAPAKIIDCVRQGMAKGKTAGLEVEASHFAELVM 279
Query: 115 SETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPV 173
S +L IFFA + G D+ PR+V KV +LGGGLMG GIA+ + P
Sbjct: 280 STESAALRSIFFATTEMKRETGAGDV--VPRKVNKVMVLGGGLMGGGIASVTTSKAKIPA 337
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
+K+++E+ L + L VK+ MT + +SL+T +Y+ KD D+V+EA
Sbjct: 338 RVKDISEQGLSNALSYAYKLLDKGVKRRHMTPSARDNIMSLMTTTTEYKGIKDADIVVEA 397
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
+ E+++LK Q+ D+E+ C + I ASNTS++ ++ I E + ++G H+FSP MP
Sbjct: 398 VFEDLNLKHQMVKDVERECGENTIFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMP 457
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++ +TSP+ I ++ +K KTPIVV + GF VNR+ Y A L+ G
Sbjct: 458 LVEVIAHKKTSPETIATVVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQS 517
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAG 413
+ +D+A+ KFG P+GP L D VG V ER + D R G
Sbjct: 518 VDHLDKALVKFGFPVGPMTLLDEVGIDVGAKISPILAAELGERFKAPAAFDKLLGDDRKG 577
Query: 414 ETTRKGFYLYDERRKASPDPEVKKFIEKARSMS-GVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFYLY ++ V + + K ++ G + + A ++E+ +V+M+ N
Sbjct: 578 RKNGKGFYLYGKKSNKKAK-RVDESVYKLLGLTPGTSTPGELADVAERCVVQML-----N 631
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPY 502
EA R EGI D DI ++ G+GFPP+
Sbjct: 632 EAVRCLEEGIIASPRDGDIGAIFGIGFPPF 661
>gi|167621957|ref|YP_001672251.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella halifaxensis HAW-EB4]
gi|189044412|sp|B0TLB9.1|FADB_SHEHH RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|167351979|gb|ABZ74592.1| fatty oxidation complex, alpha subunit FadB [Shewanella
halifaxensis HAW-EB4]
Length = 717
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 164/519 (31%), Positives = 255/519 (49%), Gaps = 30/519 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG--- 60
+ K + + A +G +DAVVAP QL A + D + + W + K+ PL
Sbjct: 169 SGKDQRPDAALKVGAIDAVVAPEQLRPAALRMLKDAMAEKLDW--QTRRAKKLAPLTLPK 226
Query: 61 -EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
EA F A+ K A + P+ I V+E G LQ E + F KL ++E
Sbjct: 227 LEAMMSFATAKGMVFKIAGKHYPAPMAVISVIEQAAQCGRAEALQIEHQAFIKLAKTEVA 286
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
++L+ IF + G ++V A+LG G+MG GIA P+++K++
Sbjct: 287 QALIGIFLNDQLVKGK--AKKAGKLAKKVNSAAVLGAGIMGGGIAYQSASKGTPIVMKDI 344
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
+ L+ G+G L ++VK+G+ T K ++ +T LDY KD D+++EA++E+
Sbjct: 345 AQPALDLGLGEAAKLLTAQVKRGRSTPAKMATVLNNITPALDYAPVKDTDIIVEAVVEHP 404
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
+K + A++E++ I+ SNTSTI +NL+ + +R G HFF+P H MPL+E++
Sbjct: 405 KVKSMVLAEVEEHVSEDAIITSNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEVI 464
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
R +S + + ++ K+ KTPIVV +C GF VNR+ FPY L+ G D ID
Sbjct: 465 RGENSSDETVASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAAID 524
Query: 359 RAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRAGET 415
+ + K FG PMGP L D+VG E FP+R KS I +M E +R G+
Sbjct: 525 KVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGKDAIDVMFEAERFGQK 584
Query: 416 TRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAK---LSEKDIVEMIFF 468
KGFY Y + P DP + ++ +F + +I+
Sbjct: 585 NNKGFYQYSVDHRGKPKKDLDPTSYELLQA-----------EFGEQKAFESDEIIARTMI 633
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
P++ E R EGI A+ D+ V G+GFPP+R F
Sbjct: 634 PMIIETVRCLEEGIIASPAEADMGLVYGLGFPPFRGGVF 672
>gi|238784373|ref|ZP_04628383.1| 3-hydroxyacyl-CoA dehydrogenase [Yersinia bercovieri ATCC 43970]
gi|238714665|gb|EEQ06667.1| 3-hydroxyacyl-CoA dehydrogenase [Yersinia bercovieri ATCC 43970]
Length = 729
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 166/512 (32%), Positives = 255/512 (49%), Gaps = 18/512 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ K + +EA +GLVDAVVA +L A ++ + W A + K+EPL
Sbjct: 166 IIAAGKDIIAKEALKVGLVDAVVAAEKLTEAALVMLKQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + A + P+ + +EA G L+ E F L S
Sbjct: 224 LNPTEAAMCFTIAKGMVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALKLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGL-APRRVKKVAILGGGLMGSGIATALILSNYPVI 174
++LV IF + G+ AP K+ A+LG G+MG GIA L PVI
Sbjct: 284 NEARALVGIFLNDQYVKGQAKKLSKGVDAP---KQAAVLGAGIMGGGIAYQSALKGVPVI 340
Query: 175 LKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+K++N+K L G+ L ++++ K+ K ++ + LDY + +++EA+
Sbjct: 341 MKDINDKSLTIGMNEAAKLLNKQLERSKIDGLKMANILATIQPTLDYTGIERAQLIVEAV 400
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
+EN +K + A++E +LASNTSTI ++ + + + G HFF+P H MPL
Sbjct: 401 VENPKIKAAVLAEVEALIGEEAVLASNTSTIPIDQLAKSLQRPENFCGMHFFNPVHRMPL 460
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
+EI+R +TS + I ++ ++ KTPIVV +C GF VNR+ FPY +LV G D
Sbjct: 461 VEIIRGAKTSDKTIAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDF 520
Query: 355 YLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKR 411
ID+ + K FG PMGP L D+VG A FP+R K + +M ++KR
Sbjct: 521 RQIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAVGFPDRMNKDYRDAVDVMFDNKR 580
Query: 412 AGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVV 471
G+ +GFY Y + K P E + ++ + AI K S++DI+ P++
Sbjct: 581 FGQKNGQGFYRYTQDAKGKPRKENDEQVDTLLA----AISQPAQKFSDEDIIARTMIPMI 636
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
NE R EGI A+ DIA V G+GFPP+
Sbjct: 637 NEVVRCLEEGIIASPAEGDIALVYGLGFPPFH 668
>gi|425092648|ref|ZP_18495733.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|405611874|gb|EKB84640.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
Length = 714
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 175/515 (33%), Positives = 268/515 (52%), Gaps = 35/515 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
MMLT K + +A GLVD VV L+ A + AL RP + +++ P
Sbjct: 167 MMLTGKQLWPRQALKAGLVDEVVPQAILLQAAVELAL----KGRPTSREVPVRERVLAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
LG +F+F Q +++ +P V + VVE G+ G +G +EA F +L S
Sbjct: 223 LGR-HLLFQFVGKQTQRKTQG-NYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSP 280
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVIL 175
++L IFFA K PG P ++ VA+LGGGLMG GIA PV +
Sbjct: 281 QSQALRSIFFASTDLKKDPGAE---AGPGPLRSVAVLGGGLMGGGIAYVTACKGGLPVRI 337
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ + + + L +V++ ++ + ++ ++L++G DY+ F D+VIEA+
Sbjct: 338 KDIQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVF 397
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E+++LKQ++ +++E+Y P I ASNTS++ + I +++G HFFSP MPL+
Sbjct: 398 EDLALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLV 457
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++ T PQ I ++ + K+ KTPIVV + GF VNR+ PY A L+ G +
Sbjct: 458 EVIPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIE 517
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDK 410
+ID A+ KFG P+GP +L D VG I TG + I F ER + + II + +D
Sbjct: 518 VIDNALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLESAFGERFSPPANIIDAILKDD 573
Query: 411 RAGETTRKGFYLYDERRKAS---PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
R G +GFYLY+ + + S PDP V + R S +LS + + E
Sbjct: 574 RKGRKNNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQS---------RLSAQQVAERCV 624
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA R F E I A D DI +V G+GFPP+
Sbjct: 625 MMMLNEAARCFDEQIIRSARDGDIGAVFGIGFPPF 659
>gi|117918483|ref|YP_867675.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella sp. ANA-3]
gi|166971641|sp|A0KR50.1|FADB_SHESA RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|117610815|gb|ABK46269.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Shewanella sp. ANA-3]
Length = 716
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 177/519 (34%), Positives = 259/519 (49%), Gaps = 30/519 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG--- 60
T K + E+A +G VDAVVAP L + A Q D + + W A + K+ PL
Sbjct: 169 TGKDQRPEDALKVGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQAR--RQRKMSPLTLPK 226
Query: 61 -EAREIFKFAR----AQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ A A K P P+ + VVE G LQ E + F KL ++
Sbjct: 227 LEAMMSFTTAKGMVFAVAGKHYP---APMAAVSVVEQAATKGRSDALQIEHQAFIKLAKT 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+ K+L+ IF + G + VK A+LG G+MG GIA P+++
Sbjct: 284 DVAKALIGIFLNDQLVKGK--AKKAGKLAKDVKSAAVLGAGIMGGGIAYQSASKGTPIVM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ + L+ G+G L ++V +G+ T EK K ++ +T LDY K D+V+EA++
Sbjct: 342 KDIAQPALDLGLGEAAKLLSAQVARGRSTPEKMAKVLNNITPALDYAPVKHADVVVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
E+ +K Q+ A++E+Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+
Sbjct: 402 EHPKVKAQVLAEVEQYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++R +S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D
Sbjct: 462 EVIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFA 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG E FP+R KS I +M E+KR
Sbjct: 522 AIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGNDAIDVMFENKRL 581
Query: 413 GETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFF 468
G+ KGFY Y + P DP + ++ A +I+
Sbjct: 582 GQKNGKGFYAYSVDSRGKPKKDVDPTSYELLKAAFGEQ--------KAFDADEIIARTMI 633
Query: 469 PVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
P++ E R EGI A+ D+ V G+GFPP+R F
Sbjct: 634 PMIIETVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>gi|330829737|ref|YP_004392689.1| Fatty oxidation complex subunit alpha [Aeromonas veronii B565]
gi|406677017|ref|ZP_11084202.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AMC35]
gi|423209569|ref|ZP_17196123.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AER397]
gi|328804873|gb|AEB50072.1| Fatty oxidation complex, alpha subunit [Aeromonas veronii B565]
gi|404617427|gb|EKB14363.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AER397]
gi|404625331|gb|EKB22148.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AMC35]
Length = 716
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 185/518 (35%), Positives = 265/518 (51%), Gaps = 32/518 (6%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALD---ILEHRRPWVATLYKTDKIE 57
+MLT K V+ ++A LGLVD VV P+ L+ A + A + +R + +T+K
Sbjct: 167 LMLTGKQVRAKQAKKLGLVDDVVPPSILLDAAIKLAKKGKPRHQLKRDLQGKVLETNK-- 224
Query: 58 PLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
LG + ++ K N P +DVV GV G +AGL E+ F +L+ +
Sbjct: 225 -LGRKVLFDQASKGVKAKTRGNYPAPERILDVVRIGVEEGMKAGLVAESRHFGELVMTAE 283
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILK 176
+L IFFA K VT G PR+V A+LGGGLMG GIA + PV +K
Sbjct: 284 SAALRSIFFATTEMKKE--VTYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKAGVPVRIK 341
Query: 177 EVNEKFLEAGIGRVRAN----LQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+V AGIG L ++K+ + + + EK +SLLTG LDY F VDMV+E
Sbjct: 342 DVAS----AGIGNAMRYSYDILAKKLKRRHILRSELEKQMSLLTGTLDYSGFHRVDMVVE 397
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A+ E+++LK Q+ D+E C H + ASNTS++ +N I +R+VG H+FSP M
Sbjct: 398 AVFEDLALKHQMVKDVEHECGEHTVFASNTSSLPINQIAAEAAHPERVVGLHYFSPVDKM 457
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL EI+ TS + + L + KTPIVV + GF VNR+ PY A LV G
Sbjct: 458 PLAEIIPHAGTSAETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGE 517
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDK 410
+ ++D A+ FG P+GP L D VG V + +++ ++Q D
Sbjct: 518 PVEVLDSALLDFGFPVGPITLLDEVGIDVGAKISPILEKELGGEQFQAPKAFDKLLQND- 576
Query: 411 RAGETTRKGFYLYDERRKASP-----DPEVKKFIEKARSMSGV-AIDPKFAKLSEKDIVE 464
R G KGFYLY KA+P E KK +++ S+ GV I P AKL+ ++I E
Sbjct: 577 RKGRKNGKGFYLYG---KAAPRNKLTGKEGKKTVDE--SVYGVLGIKPS-AKLARQEIAE 630
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
++NEA G+ A D DI ++ G+GFPP+
Sbjct: 631 RCVLLMLNEAAMALDSGVVASARDGDIGAIFGIGFPPF 668
>gi|238759593|ref|ZP_04620754.1| 3-hydroxyacyl-CoA dehydrogenase [Yersinia aldovae ATCC 35236]
gi|238702136|gb|EEP94692.1| 3-hydroxyacyl-CoA dehydrogenase [Yersinia aldovae ATCC 35236]
Length = 729
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 167/516 (32%), Positives = 260/516 (50%), Gaps = 26/516 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ K + +EA +GLVDA+VAP +L A ++ + W A + K++PL
Sbjct: 166 IIAAGKDIIAKEALKVGLVDAIVAPEKLADAALVMLKQAIDGKLDWQAA--RQPKLDPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A++ + A + P+ + +EA G L+ E F L S
Sbjct: 224 LNSTEAAMCFTIAKSMVMQVAGKHYPAPMTAVKTIEAAAKLGRTEALKLETNSFVPLAGS 283
Query: 116 ETCKSLVHIF----FAQRGTSKVP-GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSN 170
++LV IF F + K+ GV+ AP K+ A+LG G+MG GIA L
Sbjct: 284 NEARALVGIFLNDQFVKAQAKKLSKGVS----AP---KQAAVLGAGIMGGGIAYQSALKG 336
Query: 171 YPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMV 230
P+I+K++N+K L G+ L ++++GK+ K ++ + LDY + ++
Sbjct: 337 VPIIMKDINDKSLTLGMNEAAKLLNKQLERGKVDGMKMANILATIRPTLDYTGIERAQII 396
Query: 231 IEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAH 290
+EA++EN +K + A++E +LASNTSTI + + + + G HFF+P H
Sbjct: 397 VEAVVENPKVKATVLAEVEALIGEDTVLASNTSTIPIGQLAKSLKRPENFCGMHFFNPVH 456
Query: 291 VMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVER 350
MPL+EI+R +TS + I ++ ++ KTPIVV +C GF VNR+ FPY +LV
Sbjct: 457 RMPLVEIIRGAKTSDKTIASVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRD 516
Query: 351 GTDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQ 407
G D ID+ + K FG PMGP L D+VG A FPER K + +M
Sbjct: 517 GADFRQIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAIGFPERMNKDYRDAVDVMF 576
Query: 408 EDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
+++R G+ + +GFY Y + K P E E+ ++ P K S+ DI+
Sbjct: 577 DNQRFGQKSGQGFYRYTQDAKGKPRKEND---EQVDTLLATVSQPT-QKFSDDDIIARTM 632
Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
P++NE R EGI A+ D+A V G+GFPP+
Sbjct: 633 IPMINEVVRCLEEGIIASPAEGDMALVYGLGFPPFH 668
>gi|455644361|gb|EMF23461.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter freundii GTC 09479]
Length = 715
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 165/512 (32%), Positives = 258/512 (50%), Gaps = 30/512 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
M+LT K ++ ++A +GLVD VV + L+ A + A +R TL +++ P
Sbjct: 167 MILTGKQLRAKQALKVGLVDEVVPHSILLEAAVELAKKDSSAQR----TLPVRERVLAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
LG A ++ A+K N ++V+E G+ G +G EA F +L +
Sbjct: 223 LGRALLFRMASKKTAQKTQGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQS 282
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
++L HIFFA K PG +D P V G G TA PV +K++
Sbjct: 283 QALRHIFFANTDVKKDPG-SDAKPGPLNSVGVLGGGLMGGGIAYVTA-CKGGLPVRIKDI 340
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N K + + L+++V++ + + +K ++L++G +DY F D++IEA+ E++
Sbjct: 341 NAKGINHALKYSWDQLETKVRRRHIKASERDKQLALISGSIDYRGFAHRDLIIEAVFEDL 400
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
SLKQ++ A++E+ C PH + ASNTS++ + I ++++G HFFSP MPL+E++
Sbjct: 401 SLKQRMVAEVEQNCAPHTVFASNTSSLPIGDIAANATRPEQVIGLHFFSPVEKMPLVEVI 460
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
TS Q I + + KK KTPIVV + GF VNR+ PY A ++ G + ID
Sbjct: 461 PHATTSEQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETID 520
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRAG 413
A+ KFG P+GP +L D VG I TG + I + ER + + ++ + D R G
Sbjct: 521 AALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSAPANVVASILNDDRKG 576
Query: 414 ETTRKGFYLY---DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
+GFYLY + K DP + I GV +L+ + E +
Sbjct: 577 RKNGRGFYLYGVKGRKSKKQVDPAIYTLI-------GVQGQ---GRLTAAQVAERCVMLM 626
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
+NEA R F E I A D DI +V G+GFPP+
Sbjct: 627 LNEAARCFDEKIVRSARDGDIGAVFGIGFPPF 658
>gi|300724666|ref|YP_003713991.1| multifunctional 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase /3-hydroxyacyl-CoA dehydrogenase
[Xenorhabdus nematophila ATCC 19061]
gi|297631208|emb|CBJ91903.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA
dehydrogenase (C-terminal) [Xenorhabdus nematophila ATCC
19061]
Length = 728
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 258/521 (49%), Gaps = 28/521 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K + EEA GLVDAVV +LV +A ++ W A + K+ PL
Sbjct: 166 IITAGKDIGAEEALKNGLVDAVVPAAKLVDSAVSILEQAIKGDLDWKAA--RQPKLMPLN 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
E F A+ K A P+ PI + +E L+ E++ F L +
Sbjct: 224 LNEIERTMSFSVAKGMVMKIAGPHYPAPITAVKAIEKAATLSRDEALKLESDSFVTLAHT 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKV------AILGGGLMGSGIATALILS 169
++LV IF + GLA + ++ V A+LG G+MG GIA
Sbjct: 284 PVARALVGIFLNDQYVK--------GLAKKHLQAVTTPEHAAVLGAGIMGGGIAYQSARK 335
Query: 170 NYPVILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDM 229
PV++K++N+K L+ GI L + ++G++ K K +S + L Y + +
Sbjct: 336 GIPVLMKDINQKALDLGINEAAKLLNKQFERGRLEAMKMAKILSSIQPSLSYAGIEQSQI 395
Query: 230 VIEAIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPA 289
V+EA++EN +K + A+ E + CILASNTSTI + + + G HFF+P
Sbjct: 396 VVEAVVENPKIKAAVLAETESHISDECILASNTSTIPITELANSLKRPENFCGMHFFNPV 455
Query: 290 HVMPLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVE 349
H MPL+EI+R +TS + I ++ K+ KTPIVV +C GF VNR+ FPY +LV
Sbjct: 456 HRMPLVEIIRGEKTSDKTISTVVAYASKMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVR 515
Query: 350 RGTDLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIM 406
G D ID+ + K FG PMGP L D+VG A + FP+R + I ++
Sbjct: 516 DGGDFRQIDKIMEKEFGWPMGPAYLLDVVGIDTAHHAQAVMAQGFPDRMSRDYRDAIDVL 575
Query: 407 QEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMI 466
E++R G+ GFY Y + +K P E + ++ ++G++ PK A SE +I+
Sbjct: 576 FENQRYGQKNGVGFYQYTQDKKGKPKKEQDETTDQL--LAGIS-QPKQAFTSE-EIIART 631
Query: 467 FFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
P++NE R EGI A+ D+A V G+GFPP+ F
Sbjct: 632 MIPMINEVVRCLEEGIIASPAEADMALVYGLGFPPFHGGVF 672
>gi|400260686|pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
gi|400260687|pdb|3ZWB|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
Length = 742
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 271/547 (49%), Gaps = 31/547 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + K + +EA LG++DAVV + V A ++A I++ +P + L
Sbjct: 170 LITSGKYLSADEALRLGILDAVVKSDP-VEEAIKFAQKIID--KPIEPRRIFNKPVPSLP 226
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+F A A+ RKQ P + P C+ ++A V G+++E + F L S K+
Sbjct: 227 NMDSVFAEAIAKVRKQYPGVLAPETCVRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKA 286
Query: 121 LVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L + FFA++ +K G + + + V V +LG G MG GIA + V+ E
Sbjct: 287 LQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVAVE 346
Query: 178 VNEKFLEAGIGRVRANLQ---SRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAI 234
+ K L+A + L+ SR + K + S T + VD+V+EA+
Sbjct: 347 SDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-----KELSTVDLVVEAV 401
Query: 235 IENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPL 294
E+++LK+++FA+L C P L +NTS ++++ I T ++G HFFSPAHVM L
Sbjct: 402 FEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRL 461
Query: 295 LEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDL 354
LE++ + +SP I ++ + KKI K +VVGNC GF NRM PY F L+E G+
Sbjct: 462 LEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKP 521
Query: 355 YLIDRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER----TYKSMII 403
+D + +FG MGPFR++DL G V TG P R + S +
Sbjct: 522 EDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLG 581
Query: 404 PIMQEDKRAGETTRKGFYLYDE--RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKD 461
++ E R G+ T KG+Y YD+ R PDP + F+ + R + + + +S+++
Sbjct: 582 DMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHI----EQRTISKEE 637
Query: 462 IVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKN 521
I+E + ++NEA R+ EG+A + +D+ + G G+P ++ + + +
Sbjct: 638 ILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEK 697
Query: 522 LLCYFDQ 528
L Y+ Q
Sbjct: 698 LQKYYRQ 704
>gi|19424318|ref|NP_598290.1| peroxisomal bifunctional enzyme [Rattus norvegicus]
gi|119120|sp|P07896.2|ECHP_RAT RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|206069|gb|AAA41825.1| peroxisomal enoyl-CoA: hydrotase-3-hydroxyacyl-CoA [Rattus
norvegicus]
gi|59809132|gb|AAH89777.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Rattus norvegicus]
gi|149019890|gb|EDL78038.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Rattus norvegicus]
Length = 722
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 159/544 (29%), Positives = 268/544 (49%), Gaps = 25/544 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ + K + +EA LG++DAVV + V A ++A I++ +P + L
Sbjct: 150 LITSGKYLSADEALRLGILDAVVKSDP-VEEAIKFAQKIID--KPIEPRRIFNKPVPSLP 206
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+F A A+ RKQ P + P C+ ++A V G+++E + F L S K+
Sbjct: 207 NMDSVFAEAIAKVRKQYPGVLAPETCVRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKA 266
Query: 121 LVHIFFAQRGTSKVP---GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
L + FFA++ +K G + + + V V +LG G MG GIA + V+ E
Sbjct: 267 LQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVAVE 326
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ K L+A + L+ + + K + + VD+V+EA+ E+
Sbjct: 327 SDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSS--STKELSTVDLVVEAVFED 384
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK+++FA+L C P L +NTS ++++ I T ++G HFFSPAHVM LLE+
Sbjct: 385 MNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEV 444
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ + +SP I ++ + KKI K +VVGNC GF NRM PY F L+E G+ +
Sbjct: 445 IPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDV 504
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIA-------TGMQFIENFPER----TYKSMIIPIM 406
D + +FG MGPFR++DL G V TG P R + S + ++
Sbjct: 505 DGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDML 564
Query: 407 QEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVE 464
E R G+ T KG+Y YD+ R PDP + F+ + R + + + +S+++I+E
Sbjct: 565 CEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHI----EQRTISKEEILE 620
Query: 465 MIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLC 524
+ ++NEA R+ EG+A + +D+ + G G+P ++ + + + L
Sbjct: 621 RCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQK 680
Query: 525 YFDQ 528
Y+ Q
Sbjct: 681 YYRQ 684
>gi|238798049|ref|ZP_04641538.1| 3-hydroxyacyl-CoA dehydrogenase [Yersinia mollaretii ATCC 43969]
gi|238718152|gb|EEQ09979.1| 3-hydroxyacyl-CoA dehydrogenase [Yersinia mollaretii ATCC 43969]
Length = 729
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 256/514 (49%), Gaps = 22/514 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ K + ++A +GLVDAVVA +L A ++ + W A + K+EPL
Sbjct: 166 IIAAGKDIIAKDALKVGLVDAVVAAEKLTEAALVMLKQAIDGKLNWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + A + P+ + +EA G L+ E F L S
Sbjct: 224 LNPTEAAMCFTIAKGMVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALKLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQ---RGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++LV IF +G +K L K+ A+LG G+MG GIA L P
Sbjct: 284 NEARALVGIFLNDQFVKGQAK-----KLSKGVNAPKQAAVLGAGIMGGGIAYQSALKGVP 338
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
VI+K++N+K L G+ L ++++GK+ K ++ + LDY + +++E
Sbjct: 339 VIMKDINDKSLTIGMNEAAKLLNKQLERGKIDGLKMATILATIQPTLDYTGIERAQLIVE 398
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +K + A++E +LASNTSTI ++ + + + G HFF+P H M
Sbjct: 399 AVVENPKIKAAVLAEVEALISEDAVLASNTSTIPIDQLAKSLQRPENFCGMHFFNPVHRM 458
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+EI+R +TS + I ++ ++ KTPIVV +C GF VNR+ FPY +LV G
Sbjct: 459 PLVEIIRGAKTSDKTIAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGG 518
Query: 353 DLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQED 409
D ID+ + K FG PMGP L D+VG A FP+R K + +M ++
Sbjct: 519 DFRQIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAVGFPDRMNKDYRDAVDVMFDN 578
Query: 410 KRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+R G+ +GFY Y + K P E + ++ + AI K S++DI+ P
Sbjct: 579 QRFGQKNGQGFYRYTQDAKGKPRKENDEQVDILLA----AISQPAQKFSDEDIIARTMIP 634
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
++NE R EGI A+ DIA V G+GFPP+
Sbjct: 635 MINEVVRCLEEGIIASPAEGDIALVYGLGFPPFH 668
>gi|421845948|ref|ZP_16279099.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411772717|gb|EKS56312.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter freundii ATCC 8090 = MTCC 1658]
Length = 715
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 165/512 (32%), Positives = 258/512 (50%), Gaps = 30/512 (5%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
M+LT K ++ ++A +GLVD VV + L+ A + A +R TL +++ P
Sbjct: 167 MILTGKQLRAKQALKVGLVDEVVPHSILLEAAVELAKKDSSAQR----TLPVRERVLAGP 222
Query: 59 LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
LG A ++ A+K N ++V+E G+ G +G EA F +L +
Sbjct: 223 LGRALLFRMASKKTAQKTQGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQS 282
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEV 178
++L HIFFA K PG +D P V G G TA PV +K++
Sbjct: 283 QALRHIFFANTDVKKDPG-SDAKPGPLNSVGVLGGGLMGGGIAYVTA-CKGGLPVRIKDI 340
Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
N K + + L+++V++ + + +K ++L++G +DY F D++IEA+ E++
Sbjct: 341 NAKGINHALKYSWDQLETKVRRRHIKASERDKQLALISGSIDYRGFAHRDLIIEAVFEDL 400
Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
SLKQ++ A++E+ C PH + ASNTS++ + I ++++G HFFSP MPL+E++
Sbjct: 401 SLKQRMVAEVEQNCAPHTVFASNTSSLPIGDIAANATRPEQVIGLHFFSPVEKMPLVEVI 460
Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
TS Q I + + KK KTPIVV + GF VNR+ PY A ++ G + ID
Sbjct: 461 PHATTSEQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETID 520
Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRAG 413
A+ KFG P+GP +L D VG I TG + I + ER + + ++ + D R G
Sbjct: 521 AALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSAPANVVASILNDDRKG 576
Query: 414 ETTRKGFYLY---DERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
+GFYLY + K DP + I GV +L+ + E +
Sbjct: 577 RKNGRGFYLYGVKGRKSKKQVDPAIYTLI-------GVQGQ---GRLTAAQVAERCVMLM 626
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPY 502
+NEA R F E I A D DI +V G+GFPP+
Sbjct: 627 LNEAARCFDEKIVRSARDGDIGAVFGIGFPPF 658
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,990,698,059
Number of Sequences: 23463169
Number of extensions: 329692047
Number of successful extensions: 914335
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8685
Number of HSP's successfully gapped in prelim test: 750
Number of HSP's that attempted gapping in prelim test: 882646
Number of HSP's gapped (non-prelim): 12013
length of query: 535
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 388
effective length of database: 8,910,109,524
effective search space: 3457122495312
effective search space used: 3457122495312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)