BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009395
(535 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZPI5|MFP2_ARATH Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2
OS=Arabidopsis thaliana GN=MFP2 PE=1 SV=1
Length = 725
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/503 (80%), Positives = 456/503 (90%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LTSKPVK EE HSLGL+DAVV P +LV+TAR+WALDI+ R+PWV+++ KTDK+ PLG
Sbjct: 166 MILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLG 225
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI FA+AQ K+APN+ HP++C+D +E G+VSGPRAGL+KEAE ++++ +T K
Sbjct: 226 EAREILTFAKAQTLKRAPNMKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKG 285
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FF+QRGT+KVPGVTD GL PR++KKVAI+GGGLMGSGIATALILSNYPVILKEVNE
Sbjct: 286 LIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFLEAGIGRV+ANLQSRV+KG M+QEKFEKT+SLL G LDYESF+DVDMVIEA+IEN+SL
Sbjct: 346 KFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISL 405
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIFADLEKYCP HCILASNTSTIDLN IGERT S+DRIVGAHFFSPAH+MPLLEIVRT
Sbjct: 406 KQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRT 465
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
N TS QVIVDLLD+GKKIKKTP+VVGNCTGFAVNRMFFPYTQAA LVE G D YLIDRA
Sbjct: 466 NHTSAQVIVDLLDVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRA 525
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+KFGMPMGPFRL DLVGFGVAIAT QFIENF ERTYKSMIIP+MQEDKRAGE TRKGF
Sbjct: 526 ISKFGMPMGPFRLCDLVGFGVAIATATQFIENFSERTYKSMIIPLMQEDKRAGEATRKGF 585
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD++RKA PDPE+KK+IEKARS+SGV +DPK A LSEKDI+EM FFPVVNEACRVFAE
Sbjct: 586 YLYDDKRKAKPDPELKKYIEKARSISGVKLDPKLANLSEKDIIEMTFFPVVNEACRVFAE 645
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDIA +MGMGFPPYR
Sbjct: 646 GIAVKAADLDIAGIMGMGFPPYR 668
>sp|Q39659|MFPA_CUCSA Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
OS=Cucumis sativus PE=1 SV=1
Length = 725
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/503 (79%), Positives = 451/503 (89%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLTSKP+KG+EAHSLGLVDA+V P +L++TAR+WAL+ILE RRPWV +L++TDK+E L
Sbjct: 166 MMLTSKPIKGQEAHSLGLVDAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLA 225
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR+IF ARAQA+KQ PNL H I CID VE GVVSGPRAGL KEAE+FQ LL S+TCKS
Sbjct: 226 EARKIFNLARAQAKKQYPNLKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKS 285
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+HIFFAQR T+KVPGVTDLGL PR++KKVAI+GGGLMGSGIATALILSNY V+LKEVN+
Sbjct: 286 LIHIFFAQRSTTKVPGVTDLGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVND 345
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFL+AGI RVRANLQSRVKKG MT EKFEK+ISLL GVL+YESFKDVDMVIEA+IENVSL
Sbjct: 346 KFLQAGIDRVRANLQSRVKKGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSL 405
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIF+DLEKYCPPHC+LA+NTSTIDL LIGER S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 406 KQQIFSDLEKYCPPHCMLATNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRT 465
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
T+ QVIVDLLD+GK IKKTP+VVGNCTGFAVNRMFFPY+QAA LL E G D Y IDRA
Sbjct: 466 KHTAAQVIVDLLDVGKNIKKTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRA 525
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+KFGMPMGPFRL DLVGFGVA AT QF++ FPERTYKSM+IP+MQEDK AGE+TRKGF
Sbjct: 526 ISKFGMPMGPFRLCDLVGFGVAAATASQFVQAFPERTYKSMLIPLMQEDKNAGESTRKGF 585
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+YD+ RKA P+PE+KK+IEKAR+ SGV++DPK KL EKDIVEMIFFPVVNEACRV AE
Sbjct: 586 YVYDKNRKAGPNPELKKYIEKARNSSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLAE 645
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDIA VMGMGFP YR
Sbjct: 646 GIAVKAADLDIAGVMGMGFPSYR 668
>sp|O49809|MFPA_BRANA Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
OS=Brassica napus PE=2 SV=2
Length = 725
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/503 (78%), Positives = 451/503 (89%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+LTSKPVK EE HSLGL+DAVV P +L++ AR+WALDI E R+PWV+++ KTDK+ PLG
Sbjct: 166 MILTSKPVKAEEGHSLGLIDAVVPPAELLNAARRWALDIAERRKPWVSSVLKTDKLPPLG 225
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAREI KFA+ Q R+QAPN+ HP++C++ VE G+VSG RAGL+KEA+ +++ +T K
Sbjct: 226 EAREILKFAKDQTRRQAPNMKHPLMCLEAVEVGIVSGSRAGLEKEAQVGSEVINLDTTKG 285
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+H+FF+QRGT+KVPGVTD GL PR++ KVAI+GGGLMGSGIATALILSNY VILKEVNE
Sbjct: 286 LIHVFFSQRGTTKVPGVTDRGLVPRKINKVAIIGGGLMGSGIATALILSNYSVILKEVNE 345
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
KFLEAGIGRV+ANLQSRVKKGKM++EKFEKT+SLL G LDYESF+DVDMVIEA+IEN+SL
Sbjct: 346 KFLEAGIGRVKANLQSRVKKGKMSKEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISL 405
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQQIFADLEKYCP HCILASNTSTIDLN IGERT S+DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 406 KQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIIGAHFFSPAHVMPLLEIVRT 465
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
N TS QVIVDLLD+GKKI+KTP+VVGNCTGFAVNRMFFPYTQAA LVE GTD YLID+A
Sbjct: 466 NHTSAQVIVDLLDVGKKIRKTPVVVGNCTGFAVNRMFFPYTQAAMFLVEHGTDPYLIDKA 525
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
++KFGMPMGPFRL DLVGFGVAIAT QFIENFPERTYKSMIIP+MQEDKRAGE TRKGF
Sbjct: 526 VSKFGMPMGPFRLCDLVGFGVAIATATQFIENFPERTYKSMIIPLMQEDKRAGEATRKGF 585
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLYD+RRKA PDPE+K +I+KARS+SG DPK KLSEK+I+EM FFPVVNEACRVFAE
Sbjct: 586 YLYDDRRKAKPDPEIKNYIDKARSVSGAKPDPKLEKLSEKEIIEMTFFPVVNEACRVFAE 645
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
GIAVKAADLDIA + GMGFPPYR
Sbjct: 646 GIAVKAADLDIAGIFGMGFPPYR 668
>sp|Q9ZPI6|AIM1_ARATH Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1
OS=Arabidopsis thaliana GN=AIM1 PE=1 SV=1
Length = 721
Score = 612 bits (1578), Expect = e-174, Method: Compositional matrix adjust.
Identities = 286/503 (56%), Positives = 379/503 (75%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
M+L SK + EE H LGL+DA+V P ++ST+R+WALDI E R+P++ +L++TDKI L
Sbjct: 163 MILLSKSISSEEGHKLGLIDALVPPGDVLSTSRKWALDIAEGRKPFLQSLHRTDKIGSLS 222
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR I K +R A+K APN+ CI+V+E G++ G +G+ KEAE F++L+ S+T K
Sbjct: 223 EARAILKNSRQLAKKIAPNMPQHHACIEVIEEGIIHGGYSGVLKEAEVFKQLVLSDTAKG 282
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH+FFAQR TSKVP VTD+GL PR +KKVA++GGGLMGSGIATAL+LSN V+LKE+N
Sbjct: 283 LVHVFFAQRATSKVPNVTDVGLKPRPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINS 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL GI V AN++S V +GK+TQ+K K +SL GVLDY F DVDMVIEA+IEN+ L
Sbjct: 343 EFLMKGIKSVEANMKSLVSRGKLTQDKAGKALSLFKGVLDYTEFNDVDMVIEAVIENIQL 402
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF ++EK C PHCILASNTSTIDL++IGE+T SKDRIVGAHFFSPAH+MPLLEIVR+
Sbjct: 403 KQNIFKEIEKVCSPHCILASNTSTIDLDVIGEKTNSKDRIVGAHFFSPAHLMPLLEIVRS 462
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
TS QVI+DL+ +GK IKK P+VVGNC GFAVNR FFPY+QAA +L G DL+ ID
Sbjct: 463 KNTSAQVILDLMAVGKAIKKVPVVVGNCIGFAVNRTFFPYSQAAHMLANLGVDLFRIDSV 522
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
IT FG+P+GPF+L DL G G+ +A G + + + +R ++S + ++ + R G+ +G+
Sbjct: 523 ITSFGLPLGPFQLGDLAGHGIGLAVGPIYAKVYGDRMFRSPMTELLLKSGRNGKINGRGY 582
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
Y+Y++ K PDP V +EK+R ++ + K +++K+IVEMI FPVVNEACRV E
Sbjct: 583 YIYEKGSKPKPDPSVLSIVEKSRKLTNIMPGGKPISVTDKEIVEMILFPVVNEACRVLDE 642
Query: 481 GIAVKAADLDIASVMGMGFPPYR 503
G+ ++A+DLDIASV+GM FP YR
Sbjct: 643 GVVIRASDLDIASVLGMSFPSYR 665
>sp|Q8W1L6|MFP_ORYSJ Peroxisomal fatty acid beta-oxidation multifunctional protein
OS=Oryza sativa subsp. japonica GN=MFP PE=1 SV=2
Length = 726
Score = 603 bits (1554), Expect = e-171, Method: Compositional matrix adjust.
Identities = 288/533 (54%), Positives = 385/533 (72%), Gaps = 10/533 (1%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MML SK + +E GLVDA+ +P++L+ +R WAL+I +R+PW+ +L +TD++ L
Sbjct: 163 MMLQSKFITAKEGKEGGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLS 222
Query: 61 EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
EAR + AR QA+K A NL C+DV+E GV+ G AG+ KEA+ F++L+ S T K+
Sbjct: 223 EARSVLNSARQQAKKVAANLPQHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKA 282
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
LVH FFAQR T+KVPGVTD+ L PR+++KVA++GGGLMGSGIATAL++SN V+LKEVN
Sbjct: 283 LVHAFFAQRLTTKVPGVTDVQLKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNP 342
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
+FL+ G + ANL+ VK+G +T++K K +SLL G LDY FKDVDMVIEA+IE + L
Sbjct: 343 QFLQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPL 402
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
KQ IF+DLEK CPPHCILA+NTSTIDLN++GE+T S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 403 KQSIFSDLEKVCPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 462
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+TSPQ I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ + LLV G D++ IDR
Sbjct: 463 EKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRV 522
Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
I+ FGMPMGPF+L DL G+GVA+A + F R S ++ +M ++ R G++ KG+
Sbjct: 523 ISSFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGY 582
Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
YLY++ K PDP V+ I++ R + K LS++DI+EMIFFPVVNEACRV E
Sbjct: 583 YLYEKGGKPKPDPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDE 642
Query: 481 GIAVKAADLDIASVMGMGFPPYR----------FVTFIHRGFSKSSSCFKNLL 523
+ ++A+DLDIAS++GMGFP +R +IH SK + + +
Sbjct: 643 NVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGDFF 695
>sp|Q6NYL3|ECHP_DANRE Peroxisomal bifunctional enzyme OS=Danio rerio GN=ehhadh PE=2 SV=1
Length = 718
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 272/523 (52%), Gaps = 37/523 (7%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDI----LEHRRPWVATLYKTDKI 56
++ T + V +EA LG+VD V N A ++AL L RR + T +
Sbjct: 150 LITTGRHVSAQEALKLGMVDQVTEQNT-CEVALEFALKAVGKPLSSRRLSMLTTPCPPGL 208
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
+ IF+ A Q +K+A + P+ C+ V A + G+++E E L S
Sbjct: 209 D------GIFEAATMQVQKKARGVMAPLACVQAVRAATLPYSE-GIKREGELMATLFSSG 261
Query: 117 TCKSLVHIFFAQRGTSK--VP-GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
++L + FFAQR K +P G PR ++ A++G G MG GI +L V
Sbjct: 262 QAQALQYSFFAQRTAEKWTLPSGAQWNNSKPREIQSAAVIGLGTMGRGIVVSLARVGISV 321
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
I E +K LE G V L+ K+ ++ +++LL L + KDVD+VIEA
Sbjct: 322 IAVESEKKLLETGRQMVIGMLERDAKRRGVS-----ASLNLLKFSLSLQDLKDVDLVIEA 376
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
+ E+++LK+QIF +L + C P +L SNTS +D++ + + T + G HFFSPAHVM
Sbjct: 377 VFEDMALKKQIFRELSRVCRPATLLCSNTSGLDVDALADVTDRPQLVAGMHFFSPAHVMK 436
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
LLE+V ++S + I + +GK++ K + VGNC GF NRM PY + A L+E G
Sbjct: 437 LLEVVCGPRSSKEAIATAMSLGKRMGKVSVAVGNCPGFVGNRMLMPYLEQATFLLEEGAT 496
Query: 354 LYLIDRAITKFGMPMGPFRLADL----VGFGVAIATGMQFIE----NFPERTYKSMIIPI 405
ID+A+ FG MG FR++DL VG+ V +G+ + + P R PI
Sbjct: 497 PQQIDKALEDFGFAMGVFRMSDLAGLDVGWRVRKESGLTGPDVDPKDPPRRRQGRKYCPI 556
Query: 406 ---MQEDKRAGETTRKGFYLYDE--RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEK 460
+ + R G+ T +G+Y+YD+ A PDP ++ +E RS G I P+ K++++
Sbjct: 557 PDMVCQQGRFGQKTGRGWYMYDKPGDTNAKPDPLIQNLLETYRSRYG--IQPR--KITDQ 612
Query: 461 DIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+I+E F + NE R+ + IA + D+D+ + G GFP +R
Sbjct: 613 EIIERCLFALANEGFRILKDKIAGQPEDIDVIYLFGYGFPRHR 655
>sp|Q87ZB2|FADB_PSESM Fatty acid oxidation complex subunit alpha OS=Pseudomonas syringae
pv. tomato (strain DC3000) GN=fadB PE=3 SV=1
Length = 721
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 268/521 (51%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G+VDA+VAP +L + A D R+P K DK+
Sbjct: 170 SGKENSAEDALKVGVVDAIVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ + G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAAIFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G ++ R VK+ A+LG G+MG GIA + P
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + + + E
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEAN 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY+Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 INWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>sp|A3CYJ4|FADB_SHEB5 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
(strain OS155 / ATCC BAA-1091) GN=fadB PE=3 SV=1
Length = 716
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/514 (33%), Positives = 253/514 (49%), Gaps = 20/514 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K + E+A +G VDAVVAP L + A Q D + + W A + L +
Sbjct: 169 TGKDQRAEDALKVGAVDAVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + V+E G LQ E + F KL +++ K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + V A+LG G+MG GIA P+++K++ +
Sbjct: 289 LIGIFLNDQFVKGK--AKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKI 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K Q+ A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+EI+R
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEIIRG 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D ID+
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R KS I +M E+KR G+
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586
Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY+Y + P DP ++ A + DI+ P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKAFEADDIIARTMIPMIIE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI A+ D+ V G+GFPP+R F
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>sp|Q48GW3|FADB_PSE14 Fatty acid oxidation complex subunit alpha OS=Pseudomonas syringae
pv. phaseolicola (strain 1448A / Race 6) GN=fadB PE=3
SV=1
Length = 721
Score = 256 bits (655), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 265/520 (50%), Gaps = 41/520 (7%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP +L + A D R+P K DK+
Sbjct: 170 SGKESSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
++ +SL+ +F + K D + VK+ A+LG G+MG GIA + P+
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDA--VAKDVKQAAVLGAGIMGGGIAYQSAVKGTPI 340
Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+EA
Sbjct: 341 LMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEA 400
Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
++EN +KQ + A++E H ILASNTSTI ++L+ + + VG HFF+P H+MP
Sbjct: 401 VVENPKVKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMP 460
Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
L+E++R ++S + + + +K+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 461 LVEVIRGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVD 520
Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKR 411
ID+ + KFG PMGP L D+VG E FP+R + ++ + E KR
Sbjct: 521 FVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKR 580
Query: 412 AGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDIV 463
G+ KGFY Y+ +K P DP V K + + R ++S++DI+
Sbjct: 581 LGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDII 628
Query: 464 EMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 629 NWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>sp|A9KU91|FADB_SHEB9 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
(strain OS195) GN=fadB PE=3 SV=1
Length = 716
Score = 256 bits (654), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 253/514 (49%), Gaps = 20/514 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K + E+A +G VDAVVAP L + A Q D + + W A + L +
Sbjct: 169 TGKDQRAEDALKVGAVDAVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + V+E G LQ E + F KL +++ K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + V A+LG G+MG GIA P+++K++ +
Sbjct: 289 LIGIFLNDQFVKGK--AKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKI 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K Q+ A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+E++R
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D ID+
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R KS I +M E+KR G+
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586
Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY+Y + P DP ++ A + DI+ P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKAFEADDIIARTMIPMIIE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI A+ D+ V G+GFPP+R F
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>sp|B8E3R3|FADB_SHEB2 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
(strain OS223) GN=fadB PE=3 SV=1
Length = 716
Score = 256 bits (654), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 253/514 (49%), Gaps = 20/514 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K + E+A +G VDAVVAP L + A Q D + + W A + L +
Sbjct: 169 TGKDQRAEDALKVGAVDAVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + V+E G LQ E + F KL +++ K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + V A+LG G+MG GIA P+++K++ +
Sbjct: 289 LIGIFLNDQFVKGK--AKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKI 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K Q+ A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+E++R
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D ID+
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R KS I +M E+KR G+
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586
Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY+Y + P DP ++ A + DI+ P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKAFEADDIIARTMIPMIIE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI A+ D+ V G+GFPP+R F
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>sp|A1RDW6|FADB_SHESW Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
(strain W3-18-1) GN=fadB PE=3 SV=1
Length = 716
Score = 256 bits (653), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 253/514 (49%), Gaps = 20/514 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T + E+A +G VDAVVAP L + A Q D + + W A + L +
Sbjct: 169 TGNDQRAEDALKVGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + V+E G LQ E + F KL +++ K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + VK A+LG G+MG GIA P+++K++ +
Sbjct: 289 LIGIFLNDQLVKGK--AKKAGKLAKEVKNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAALKHSDVVVEAVVEHPKI 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K Q+ A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+E++R
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D ID+
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R KS I +M E+KR G+
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586
Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY+Y + P DP ++ A + DI+ P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKTFEADDIIARTMIPMIIE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI A+ D+ V G+GFPP+R F
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>sp|A4Y1B6|FADB_SHEPC Fatty acid oxidation complex subunit alpha OS=Shewanella
putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadB PE=3
SV=1
Length = 716
Score = 256 bits (653), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 253/514 (49%), Gaps = 20/514 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T + E+A +G VDAVVAP L + A Q D + + W A + L +
Sbjct: 169 TGNDQRAEDALKVGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + V+E G LQ E + F KL +++ K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + VK A+LG G+MG GIA P+++K++ +
Sbjct: 289 LIGIFLNDQLVKGK--AKKAGKLAKEVKNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAALKHSDVVVEAVVEHPKI 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K Q+ A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+E++R
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D ID+
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R KS I +M E+KR G+
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586
Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY+Y + P DP ++ A + DI+ P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKTFEADDIIARTMIPMIIE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI A+ D+ V G+GFPP+R F
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>sp|A6WHA0|FADB_SHEB8 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
(strain OS185) GN=fadB PE=3 SV=1
Length = 716
Score = 255 bits (651), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 168/514 (32%), Positives = 253/514 (49%), Gaps = 20/514 (3%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T K + E+A +G VD+VVAP L + A Q D + + W A + L +
Sbjct: 169 TGKDQRAEDALKVGAVDSVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228
Query: 64 EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
+ F A+ A H P+ + V+E G LQ E + F KL +++ K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288
Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
L+ IF + G + V A+LG G+MG GIA P+++K++ +
Sbjct: 289 LIGIFLNDQFVKGK--AKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346
Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
L+ G+ L ++V +G+ T EK K ++ +T LDY + K D+V+EA++E+ +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKI 406
Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
K Q+ A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+E++R
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466
Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
+S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D ID+
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526
Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
+ K FG PMGP L D+VG E FP+R KS I +M E+KR G+
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586
Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
KGFY+Y + P DP ++ A + DI+ P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKAFEADDIIARTMIPMIIE 638
Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
R EGI A+ D+ V G+GFPP+R F
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVF 672
>sp|Q9HZJ2|FADB_PSEAE Fatty acid oxidation complex subunit alpha OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=fadB PE=3 SV=1
Length = 715
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 263/513 (51%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA-------LDILEHRRPWVATLYKTDKI 56
+ K K E+A +G VDAVVAP QL + A A LD R+P + L K + I
Sbjct: 170 SGKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK A+LG G+MG GIA L P+++K
Sbjct: 286 VAQSLIGLFLNDQELKKKAKKYDE--VAKDVKLAAVLGAGIMGGGIAYQSALKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T K + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E I+ASNTSTI ++L+ + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +T I + KK+ K+PIVV +C GF VNR+ FPY L+ G D
Sbjct: 464 VIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++ P DP+ + ++ + ++ + +++++DIV + P+
Sbjct: 584 KNGKGFYAYETDKRGKPKKVTDPQAYEVLKP------IVVEQR--EVTDEDIVNFMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>sp|Q02PH8|FADB_PSEAB Fatty acid oxidation complex subunit alpha OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=fadB PE=3 SV=1
Length = 715
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 263/513 (51%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA-------LDILEHRRPWVATLYKTDKI 56
+ K K E+A +G VDAVVAP QL + A A LD R+P + L K + I
Sbjct: 170 SGKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK A+LG G+MG GIA L P+++K
Sbjct: 286 VAQSLIGLFLNDQELKKKAKKYDE--VAKDVKLAAVLGAGIMGGGIAYQSALKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T K + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E I+ASNTSTI ++L+ + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +T I + KK+ K+PIVV +C GF VNR+ FPY L+ G D
Sbjct: 464 VIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++ P DP+ + ++ + ++ + +++++DIV + P+
Sbjct: 584 KNGKGFYAYETDKRGKPKKVTDPQAYEVLKP------IVVEQR--EVTDEDIVNFMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>sp|B7UYR6|FADB_PSEA8 Fatty acid oxidation complex subunit alpha OS=Pseudomonas
aeruginosa (strain LESB58) GN=fadB PE=3 SV=1
Length = 715
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 263/513 (51%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA-------LDILEHRRPWVATLYKTDKI 56
+ K K E+A +G VDAVVAP QL + A A LD R+P + L K + I
Sbjct: 170 SGKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK A+LG G+MG GIA L P+++K
Sbjct: 286 VAQSLIGLFLNDQELKKKAKKYDE--VAKDVKLAAVLGAGIMGGGIAYQSALKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T K + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E I+ASNTSTI ++L+ + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +T I + KK+ K+PIVV +C GF VNR+ FPY L+ G D
Sbjct: 464 VIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++ P DP+ + ++ + ++ + +++++DIV + P+
Sbjct: 584 KNGKGFYAYETDKRGKPKKVTDPQAYEVLKP------IVVEQR--EVTDEDIVNFMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>sp|Q4KFC4|FADB_PSEF5 Fatty acid oxidation complex subunit alpha OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadB PE=3
SV=1
Length = 715
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 259/513 (50%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP++L V A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPDKLKDAALALVKRAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQIVLAEVEGQVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + ++ E KR G+
Sbjct: 524 IDKIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ I + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>sp|Q0HKD1|FADJ_SHESM Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
(strain MR-4) GN=fadJ PE=3 SV=1
Length = 709
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 177/510 (34%), Positives = 264/510 (51%), Gaps = 21/510 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL +P +L +E G
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRTAKPVKKSLV-NQLLEGTG 223
Query: 61 EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I + A+ A+K N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQAAKQVAKKTQGNYPAPAKIIDCVRQGMAKGMQKGLEVEASHFAELVVSKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G PR+VKK ILGGGLMG GIA+ + P +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+NEK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 342 INEKGLSNALSYAYKLLDKGVKRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ + I + + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSIEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKIAPILEKELGERFKAPAAFDKLLSDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-----AIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y KA P KK +++ S+ GV ID + + ++E+ +V+M+ N
Sbjct: 582 KGFYQYAAGNKA---PSKKKAVDE--SVYGVLGIKPGIDKEMSAVAERCVVQML-----N 631
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPY 502
EA R +GI D DI ++ G+GFPP+
Sbjct: 632 EAVRCLDDGIIASPRDGDIGAIFGIGFPPF 661
>sp|A6V382|FADB_PSEA7 Fatty acid oxidation complex subunit alpha OS=Pseudomonas
aeruginosa (strain PA7) GN=fadB PE=3 SV=1
Length = 715
Score = 252 bits (644), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 263/513 (51%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA-------LDILEHRRPWVATLYKTDKI 56
+ K K E+A +G VDAVVAP QL + A A LD R+P + L K + I
Sbjct: 170 SGKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D + VK A+LG G+MG GIA L P+++K
Sbjct: 286 VAQSLIGLFLNDQELKKKAKKYDE--VAKDVKLAAVLGAGIMGGGIAYQSALKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T K + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E I+ASNTSTI ++L+ + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +T I + KK+ K+PIVV +C GF VNR+ FPY L+ G D
Sbjct: 464 VIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLGFGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ ++ P DP+ + ++ + ++ + +++++DIV + P+
Sbjct: 584 KNGKGFYAYETDKRGKPKKVTDPQAYEVLKP------IVVEQR--EVTDEDIVNFMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>sp|Q0HWN3|FADJ_SHESR Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
(strain MR-7) GN=fadJ PE=3 SV=1
Length = 709
Score = 252 bits (644), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 177/510 (34%), Positives = 263/510 (51%), Gaps = 21/510 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL +P +L +E G
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRTAKPVKKSLV-NQLLEGTG 223
Query: 61 EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I + A+ A+K N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQAAKQVAKKTQGNYPAPAKIIDCVRQGMAKGMQKGLEVEASHFAELVVSKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G PR+VKK ILGGGLMG GIA+ + P +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+NEK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 342 INEKGLSNALSYAYKLLDKGVKRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ + I + + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSIEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKIAPILETELGERFKAPAAFDKLLSDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-----AIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y KAS KK +++ S+ GV ID + + ++E+ +V+M+ N
Sbjct: 582 KGFYQYAAGNKASSK---KKVVDE--SVYGVLGIKPGIDKEMSAVAERCVVQML-----N 631
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPY 502
EA R +GI D DI ++ G+GFPP+
Sbjct: 632 EAVRCLDDGIIASPRDGDIGAIFGIGFPPF 661
>sp|C3K613|FADB_PSEFS Fatty acid oxidation complex subunit alpha OS=Pseudomonas
fluorescens (strain SBW25) GN=fadB PE=3 SV=1
Length = 715
Score = 252 bits (643), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 256/513 (49%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP++L A D R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + K D R VK+ A+LG G+MG GIA P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IARDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++NE +E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEAQVKDDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + I + E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQ 583
Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K DP V + ++ V + + ++S++DI+ + +
Sbjct: 584 KNGKGFYAYEADKKGKQKKVADPSVHEV------LAPVIYEQR--EVSDEDIINWMMIAL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>sp|Q4ZRA0|FADB_PSEU2 Fatty acid oxidation complex subunit alpha OS=Pseudomonas syringae
pv. syringae (strain B728a) GN=fadB PE=3 SV=1
Length = 721
Score = 252 bits (643), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 265/521 (50%), Gaps = 43/521 (8%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K E+A +G VDAVVAP +L + A D R+P K DK+
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223
Query: 57 EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
+ L ++ F A+ A + PN P+ I ++ G L+ EA F K+
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282
Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
++ +SL+ +F Q K G + + VK+ A+LG G+MG GIA + P
Sbjct: 283 KTPAAQSLIGLFLNDQELKKKARGYDKIA---KDVKQAAVLGAGIMGGGIAYQSAVKGTP 339
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
+++K++ E+ ++ G+ L R++KG++T K + ++ + L Y F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +KQ + A++E + ILASNTSTI ++L+ + + VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+E++R ++S + + + KK+ K PIVV +C GF VNR+ FPY LV G
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519
Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
D ID+ + KFG PMGP L D+VG E FP+R + I + + K
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAK 579
Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
R G+ KGFY Y+ +K P DP V K + + R ++S++DI
Sbjct: 580 RLGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627
Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
V + P+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 628 VNWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>sp|Q08A39|FADB_SHEFN Fatty acid oxidation complex subunit alpha OS=Shewanella
frigidimarina (strain NCIMB 400) GN=fadB PE=3 SV=1
Length = 716
Score = 251 bits (642), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 260/516 (50%), Gaps = 24/516 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
T+K + E+A +G +DAVVAP L + A Q D L W A K L +
Sbjct: 169 TAKDQRPEDALKVGAIDAVVAPENLEAAAIQMLHDALNGSLDWQARRTKKQSPLQLPKLE 228
Query: 64 EIFKFARAQ------ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
+ FA A+ A K P P+ ++VVE L+ EA F KL +++
Sbjct: 229 AMMSFATAKGMVFSVAGKHYP---APMAAVNVVEQAAGLDRDGALKVEALAFIKLAKTDV 285
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ IF + G + V + A+LG G+MG GIA P+++K+
Sbjct: 286 AQALIGIFLNDQFVKGK--AKKAGKLAKDVNQAAVLGAGIMGGGIAYQSASKGTPIVMKD 343
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ + LE G+ L ++V +G+ T EK K ++ +T LDY + K+ D+V+EA++E+
Sbjct: 344 IAQPALELGLNEAAKILTTQVARGRSTPEKMAKVLNNITPSLDYAAIKNSDIVVEAVVEH 403
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K + A++E Y I+ASNTSTI +NL+ + +R G HFF+P H MPL+EI
Sbjct: 404 PKVKATVLAEVEGYVSEDAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEI 463
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +S + I ++ K+ KTPIVV +C GF VNR+ FPY L+ G D +
Sbjct: 464 IRGEHSSEETIATVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLAEGADFAAV 523
Query: 358 DRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRAGE 414
D+ + K FG PMGP L D+VG E FP+R K+ I IM E+KR G+
Sbjct: 524 DKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFENKRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKL---SEKDIVEMIFFPVV 471
KGFY Y R+ P KK I+ S + +F +L DI+ P++
Sbjct: 584 KNTKGFYAYSVDRRGKP----KKDIDPT---SYELLSAEFGELKAFESDDIIARCMIPMI 636
Query: 472 NEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI A+ D+ V G+GFPP+R F
Sbjct: 637 IETVRCLEEGIIASPAEGDMGLVYGIGFPPFRGGVF 672
>sp|Q3K9D8|FADB_PSEPF Fatty acid oxidation complex subunit alpha OS=Pseudomonas
fluorescens (strain Pf0-1) GN=fadB PE=3 SV=1
Length = 715
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 255/506 (50%), Gaps = 27/506 (5%)
Query: 11 EEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
E+A +G VDAVVAP +L+ A D R+P + L + + IE +
Sbjct: 177 EDALKVGAVDAVVAPEKLQDAALELIKRAVSGEFDYKAKRQPKLEKL-RLNAIEQMMAFE 235
Query: 64 EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
F QA PN P+ I ++ G L+ EA F KL ++ +SL+
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292
Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
+F + K D + VK+ A+LG G+MG GIA P+++K++NE +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
E G+ L RV KG+MT K + ++ + L Y F VD+V+EA++EN +KQ
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
+ A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+E++R ++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
S I + KK+ K PIVV +C GF VNR+ FPY LV G D ID+ + K
Sbjct: 471 SELAIATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530
Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFY 421
FG PMGP L D+VG E FP+R + I ++ E KR G+ KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFY 590
Query: 422 LYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
Y+ +K DP V + ++ I + +++++DI+ + P+ E R
Sbjct: 591 AYEADKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMMIPLCLETVRC 642
Query: 478 FAEGIAVKAADLDIASVMGMGFPPYR 503
+GI AA+ D+ V G+GFPP+R
Sbjct: 643 LEDGIVETAAEADMGLVYGIGFPPFR 668
>sp|Q66FR8|FADB_YERPS Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=fadB
PE=3 SV=1
Length = 729
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ T K V +A +GLVDAVV P +LV +A ++ + W A + K+EPL
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + + A + P+ + +EA G L E F L S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++LV IF + G+A ++ A+LG G+MG GIA L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++NE L+ G+ L ++++GK+ K ++ + LDY + +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E +LASNTSTI ++ + + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHQMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EI+R +TS + + ++ ++ KTPIVV +C GF VNR+ FPY +LV G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A FPER K + +M +++R
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ +GFY Y + K P E + ++K + I + S++DI+ P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI AA+ D+A V G+GFPP+ F
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVF 672
>sp|B2K0Z6|FADB_YERPB Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=fadB
PE=3 SV=1
Length = 729
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ T K V +A +GLVDAVV P +LV +A ++ + W A + K+EPL
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + + A + P+ + +EA G L E F L S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++LV IF + G+A ++ A+LG G+MG GIA L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++NE L+ G+ L ++++GK+ K ++ + LDY + +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E +LASNTSTI ++ + + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHQMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EI+R +TS + + ++ ++ KTPIVV +C GF VNR+ FPY +LV G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A FPER K + +M +++R
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ +GFY Y + K P E + ++K + I + S++DI+ P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI AA+ D+A V G+GFPP+ F
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVF 672
>sp|A7FDF2|FADB_YERP3 Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=fadB PE=3 SV=1
Length = 729
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ T K V +A +GLVDAVV P +LV +A ++ + W A + K+EPL
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + + A + P+ + +EA G L E F L S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++LV IF + G+A ++ A+LG G+MG GIA L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++NE L+ G+ L ++++GK+ K ++ + LDY + +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E +LASNTSTI ++ + + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EI+R +TS + + ++ ++ KTPIVV +C GF VNR+ FPY +LV G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A FPER K + +M +++R
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ +GFY Y + K P E + ++K + I + S++DI+ P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI AA+ D+A V G+GFPP+ F
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVF 672
>sp|Q9AHY3|FADB_PSEPU Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
GN=fadB PE=3 SV=2
Length = 715
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 259/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVGAVDAVVAPELLQAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVDKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + A + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDAAVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>sp|B1JP63|FADB_YERPY Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=fadB
PE=3 SV=1
Length = 729
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ T K V +A +GLVDAVV P +LV +A ++ + W A + K+EPL
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + + A + P+ + +EA G L E F L S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++LV IF + G+A ++ A+LG G+MG GIA L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++NE L+ G+ L ++++GK+ K ++ + LDY + +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E +LASNTSTI ++ + + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EI+R +TS + + ++ ++ KTPIVV +C GF VNR+ FPY +LV G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A FPER K + +M +++R
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ +GFY Y + K P E + ++K + I + S++DI+ P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI AA+ D+A V G+GFPP+ F
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVF 672
>sp|A4TR27|FADB_YERPP Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
(strain Pestoides F) GN=fadB PE=3 SV=1
Length = 729
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ T K V +A +GLVDAVV P +LV +A ++ + W A + K+EPL
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + + A + P+ + +EA G L E F L S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++LV IF + G+A ++ A+LG G+MG GIA L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++NE L+ G+ L ++++GK+ K ++ + LDY + +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E +LASNTSTI ++ + + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EI+R +TS + + ++ ++ KTPIVV +C GF VNR+ FPY +LV G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A FPER K + +M +++R
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ +GFY Y + K P E + ++K + I + S++DI+ P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI AA+ D+A V G+GFPP+ F
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVF 672
>sp|Q1CN99|FADB_YERPN Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=fadB PE=3 SV=1
Length = 729
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ T K V +A +GLVDAVV P +LV +A ++ + W A + K+EPL
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + + A + P+ + +EA G L E F L S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++LV IF + G+A ++ A+LG G+MG GIA L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++NE L+ G+ L ++++GK+ K ++ + LDY + +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E +LASNTSTI ++ + + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EI+R +TS + + ++ ++ KTPIVV +C GF VNR+ FPY +LV G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A FPER K + +M +++R
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ +GFY Y + K P E + ++K + I + S++DI+ P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI AA+ D+A V G+GFPP+ F
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVF 672
>sp|A9R754|FADB_YERPG Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Angola) GN=fadB PE=3 SV=1
Length = 729
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ T K V +A +GLVDAVV P +LV +A ++ + W A + K+EPL
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + + A + P+ + +EA G L E F L S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++LV IF + G+A ++ A+LG G+MG GIA L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++NE L+ G+ L ++++GK+ K ++ + LDY + +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E +LASNTSTI ++ + + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EI+R +TS + + ++ ++ KTPIVV +C GF VNR+ FPY +LV G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A FPER K + +M +++R
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ +GFY Y + K P E + ++K + I + S++DI+ P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI AA+ D+A V G+GFPP+ F
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVF 672
>sp|Q8ZAN0|FADB_YERPE Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
GN=fadB PE=3 SV=1
Length = 729
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ T K V +A +GLVDAVV P +LV +A ++ + W A + K+EPL
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + + A + P+ + +EA G L E F L S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++LV IF + G+A ++ A+LG G+MG GIA L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++NE L+ G+ L ++++GK+ K ++ + LDY + +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E +LASNTSTI ++ + + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EI+R +TS + + ++ ++ KTPIVV +C GF VNR+ FPY +LV G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A FPER K + +M +++R
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ +GFY Y + K P E + ++K + I + S++DI+ P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI AA+ D+A V G+GFPP+ F
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVF 672
>sp|Q1C2C4|FADB_YERPA Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=fadB PE=3 SV=1
Length = 729
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 261/515 (50%), Gaps = 16/515 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
++ T K V +A +GLVDAVV P +LV +A ++ + W A + K+EPL
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223
Query: 60 ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + + A + P+ + +EA G L E F L S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
++LV IF + G+A ++ A+LG G+MG GIA L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++NE L+ G+ L ++++GK+ K ++ + LDY + +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +K + A++E +LASNTSTI ++ + + + G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLV 461
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
EI+R +TS + + ++ ++ KTPIVV +C GF VNR+ FPY +LV G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521
Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
ID+ + K FG PMGP L D+VG A FPER K + +M +++R
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581
Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
G+ +GFY Y + K P E + ++K + I + S++DI+ P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
E R EGI AA+ D+A V G+GFPP+ F
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVF 672
>sp|Q1I7D4|FADB_PSEE4 Fatty acid oxidation complex subunit alpha OS=Pseudomonas
entomophila (strain L48) GN=fadB PE=3 SV=1
Length = 715
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 167/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLQAGALDLIKRAISGELDHKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL R+
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLARTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGKRVEKGRLTPAKMAEALNAIRPTLSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + V + + ++S++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVADASVLDVLKPVIFEQR--EVSDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>sp|A8G8D1|FADB_SERP5 Fatty acid oxidation complex subunit alpha OS=Serratia
proteamaculans (strain 568) GN=fadB PE=3 SV=1
Length = 729
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 169/518 (32%), Positives = 262/518 (50%), Gaps = 22/518 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
++ K V ++A +GLVDAVVAP +LV A + +E + W A Y+ K+EPL
Sbjct: 166 IIAAGKDVSAKDALKVGLVDAVVAPEKLVEAALKMLQQAIEGKLDWRA--YRQPKLEPLK 223
Query: 61 ----EAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
EA F A+ + A + P+ + +EA G L+ E F L RS
Sbjct: 224 LSPIEAAMSFTTAKGMVMQTAGKHYPAPMTAVKTIEAAARLGRDEALKLETASFVPLARS 283
Query: 116 ETCKSLVHIFFAQ---RGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
+ ++LV IF +G +K L K+ A+LG G+MG GIA L P
Sbjct: 284 KEARALVGIFLNDQFVKGQAK-----KLAKGIEAPKQAAVLGAGIMGGGIAYQSALKGVP 338
Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
V++K++++K L G+ L ++++GK+ K + +S + LDY + +++E
Sbjct: 339 VVMKDISDKSLTLGMNEAAKLLNKQLERGKLDGMKMAQVLSTIQPTLDYAGIERAQVIVE 398
Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
A++EN +K + +++E + +LASNTSTI +N + + G HFF+P H M
Sbjct: 399 AVVENPKIKAAVLSEVEGLIGENTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRM 458
Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
PL+EI+R QTS I ++ ++ KTPIVV +C GF VNR+ FPY +L+ G
Sbjct: 459 PLVEIIRGEQTSDSTIAAVVAYASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSMLLRDGA 518
Query: 353 DLYLIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQED 409
D ID+ + K FG PMGP L D+VG A FPER K I +M ++
Sbjct: 519 DFRQIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMGKDYRDAIDVMFDN 578
Query: 410 KRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+R G+ + GFY Y + K P K E+ + P+ +S+++I+ + P
Sbjct: 579 QRFGQKNQLGFYRYSQDNKGKPR---KDNDEQTDVLLAEVSQPR-QTISDEEIIARMMIP 634
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTF 507
++NE R E I A+ D+A V G+GFPP+ F
Sbjct: 635 MINEVVRCLEENIIASPAEADMALVYGIGFPPFHGGAF 672
>sp|A0KV76|FADJ_SHESA Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
(strain ANA-3) GN=fadJ PE=3 SV=1
Length = 709
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 173/507 (34%), Positives = 260/507 (51%), Gaps = 15/507 (2%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL +P +L +E G
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRTAKPVKKSLV-NQLLEGTG 223
Query: 61 EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I + A+ +K N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 224 FGRNIIFDQAAKQVVKKTQGNYPAPAKIIDCVRQGMAKGMQKGLEVEASHFAELVVSKES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G PR+VKK ILGGGLMG GIA+ + P +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+NEK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 342 INEKGLSNALSYAYKLLDKGVKRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ + I + + ++G H+FSP MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSIEHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKIAPILEKELGERFKAPAAFDKLLSDDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KGFY Y KAS + K E ++ G+ +D + ++E+ +V+M+ NEA
Sbjct: 582 KGFYQYAAGNKAS--SKKKAVDESVYAVLGIKPGMDKDLSAVAERCVVQML-----NEAV 634
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
R +GI D DI ++ G+GFPP+
Sbjct: 635 RCLDDGIIASPRDGDIGAIFGIGFPPF 661
>sp|A5W6H0|FADB_PSEP1 Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=fadB PE=3 SV=1
Length = 715
Score = 248 bits (634), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYESNRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>sp|A4XSM8|FADB_PSEMY Fatty acid oxidation complex subunit alpha OS=Pseudomonas mendocina
(strain ymp) GN=fadB PE=3 SV=1
Length = 715
Score = 248 bits (634), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 167/514 (32%), Positives = 264/514 (51%), Gaps = 29/514 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K K +A +G VDAVVAP +L V A LD R+P + L K + I
Sbjct: 170 SGKENKAADALKVGAVDAVVAPAKLKEAALDLVKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
E + F+ A+ QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQM----MCFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKT 284
Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
+SL+ +F + K D R VK A+LG G+MG GIA P+++
Sbjct: 285 SVAESLIGLFLNDQELKKKAKHHDE--IARDVKLAAVLGAGIMGGGIAYQSASKGTPILM 342
Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
K++ E+ ++ G+ L RV+KG+MT K + ++ + + Y F +VD+V+EA++
Sbjct: 343 KDIREEGIQMGLTEASKLLGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVV 402
Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
EN +KQ + A++E ILASNTSTI ++L+ + + VG HFF+P H+MPL+
Sbjct: 403 ENPKVKQIVLAEVEDVVREDAILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLV 462
Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
E++R ++S + + KK+ K PIVV +C GF VNR+ FPY L+ G D
Sbjct: 463 EVIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFV 522
Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAG 413
ID+ + KFG PMGP L+D+VG E FP+R + +M E R G
Sbjct: 523 RIDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLG 582
Query: 414 ETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
+ KGFY Y+ ++ P DPE + ++ + ++ + +++++DI+ + P
Sbjct: 583 QKNGKGFYAYETDKRGKPKKVSDPEAYELLKS------IVVEER--EVTDEDIINFMMIP 634
Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
+ E R +GI AA+ D+ + G+GFPP+R
Sbjct: 635 LCLETVRCLEDGIVDTAAEADMGLIYGIGFPPFR 668
>sp|B1J5A5|FADB_PSEPW Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
(strain W619) GN=fadB PE=3 SV=1
Length = 715
Score = 248 bits (634), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP LV A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLQAGALDLVKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAQSLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>sp|A4VKA3|FADB_PSEU5 Fatty acid oxidation complex subunit alpha OS=Pseudomonas stutzeri
(strain A1501) GN=fadB PE=3 SV=1
Length = 715
Score = 248 bits (633), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 162/513 (31%), Positives = 258/513 (50%), Gaps = 27/513 (5%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
+ K + E+A + VDAVVAP +L V A LD R+P + L K + I
Sbjct: 170 SGKENRAEDALKVHAVDAVVAPEKLQEAALDLVKRAISGELDYKAKRQPKLDKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G ++ EA F KL ++
Sbjct: 229 EQMMAFETSKAFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKAIEVEAAGFVKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SLV +F + + K D R VK A+LG G+MG GIA + P+++K
Sbjct: 286 VAQSLVGLFLSDQELKKKAKAYDK--QARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L RV+KG++T EK + ++ + + Y F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLDEASKLLGKRVEKGRLTPEKMAQALNAIRPTMSYGDFGNVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +K + A++E + I+ASNTSTI ++ + + + G HFF+P H+MPL+E
Sbjct: 404 NPKVKHAVLAEVEGHVREDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R +TS I + KK+ K+P+VV +C GF VNR+ FPY + G D
Sbjct: 464 VIRGEKTSETAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGE 414
D+ + KFG PMGP L D+VG E FP+R + +M + R G+
Sbjct: 524 ADKVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYDANRLGQ 583
Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
KGFY Y+ +K P DP+ + ++ I + +LS++DI+ + P+
Sbjct: 584 KNGKGFYAYEMDKKGKPKKVVDPQAYELLK--------PIVAETRELSDEDIINYMMIPL 635
Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ + G+GFPP+R
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFR 668
>sp|Q93Q12|FADB_PSEOL Fatty acid oxidation complex subunit alpha OS=Pseudomonas
oleovorans GN=fadB PE=3 SV=1
Length = 715
Score = 248 bits (633), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP LV A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLMAGALDLVKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D K+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDAKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVETQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVADASVLDVLKPIVFEQR--EVTDEDIINWMMIPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>sp|B0KH74|FADB_PSEPG Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
(strain GB-1) GN=fadB PE=3 SV=1
Length = 715
Score = 248 bits (633), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>sp|Q88L02|FADB_PSEPK Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
(strain KT2440) GN=fadB PE=3 SV=1
Length = 715
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 4 TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
K + E+A +G VDAVVAP L+ A LD R+P + L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228
Query: 57 EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
E + F QA PN P+ I ++ G L+ EA F KL ++
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285
Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
+SL+ +F + + D VK+ A+LG G+MG GIA + P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343
Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
++ E+ ++ G+ L +RV+KG++T K + ++ + L Y F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403
Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
N +KQ + A++E ILASNTSTI +NL+ + + VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463
Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
++R ++S + + KK+ K PIVV +C GF VNR+ FPY LV G D
Sbjct: 464 VIRGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523
Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
ID+ + KFG PMGP L D+VG E FP+R + + + E R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y+ ++ P KK + + + + + +++++DI+ + P+
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYR 503
E R +GI AA+ D+ V G+GFPP+R
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFR 668
>sp|Q8ECP7|FADJ_SHEON Fatty acid oxidation complex subunit alpha OS=Shewanella oneidensis
(strain MR-1) GN=fadJ PE=3 SV=1
Length = 707
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 258/507 (50%), Gaps = 19/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
MMLT K ++ ++A +GLV+ VV L+ TA + AL + +P +L +E G
Sbjct: 167 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKQIAKPVKKSLV-NQLLEGTG 225
Query: 61 EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I + A+ A+K N P ID V G+ G + GL+ EA F +L+ S+
Sbjct: 226 FGRNIIFDQAAKQVAKKTQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKES 285
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G G PR+VKK ILGGGLMG GIA+ + P +K+
Sbjct: 286 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKD 343
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+NEK L + L VK+ MT + ++L+T +Y+ KD D+V+EA+ E+
Sbjct: 344 INEKGLSNALSYAYKLLDKGVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFED 403
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ + I + + ++G H+FSP MPL+E+
Sbjct: 404 LALKHQMVKDIERECGEHTIFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEV 463
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 464 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 523
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 524 DKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLSDDRKGRKNG 583
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KGFY Y K K E + G+ +D + + ++E+ +V+M+ NEA
Sbjct: 584 KGFYQYGAASKK------KAVDETVYGVLGIKPGVDKEMSAVAERCVVQML-----NEAV 632
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
R GI D DI ++ G+GFPP+
Sbjct: 633 RCLDAGIIASPRDGDIGAIFGIGFPPF 659
>sp|A1S7L6|FADJ_SHEAM Fatty acid oxidation complex subunit alpha OS=Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadJ PE=3
SV=1
Length = 706
Score = 246 bits (629), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 176/507 (34%), Positives = 260/507 (51%), Gaps = 18/507 (3%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
+MLT K V+ ++A +GLVD VV + L+ TA + AL + R+P L T +E
Sbjct: 165 LMLTGKQVRPKQAVKMGLVDDVVPESILLDTAIEMALAGKKTRKPLKQPLV-TKLLEGTP 223
Query: 61 EAREI-FKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
R I F A Q +K N P+ ID V G+ G GL+ EA F L+ +
Sbjct: 224 VGRNIMFDQATKQVLKKTQGNYPSPLKIIDCVREGMAKGMEKGLEVEAAHFGALVATPES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
+L IFFA K G D PR+V K +LGGGLMG GIA+ + PV +K+
Sbjct: 284 AALRSIFFATTEMKKETGAGDA--KPRKVAKAVVLGGGLMGGGIASVTTTKAKVPVRVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+++K L +G L VK+ MT + +K ++L+T +Y KD D+V+EA+ E+
Sbjct: 342 ISDKGLSNALGYAYKLLDKGVKRRHMTSAERDKLMALMTTTTEYRGVKDADIVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ + I + ++G H+FSP MPL+E+
Sbjct: 402 LNLKHQMVRDIERECGEHTIFASNTSSLPITQIAAAASRPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ +TSP+ I + +K KTPIVV +C GF VNR+ Y A L+ G + +
Sbjct: 462 IAHEKTSPETIATTVAFARKQGKTPIVVKDCAGFYVNRILALYMNEAAQLLLEGQAVDHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLMADDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
KGFYLY + K + E S+ G+ A + +++E+ +V+M+ NEA
Sbjct: 582 KGFYLYGKAAKKGKKVD-----ESVYSLLGLTPATGKEAGEIAERCVVQML-----NEAV 631
Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPY 502
R EGI D DI ++ G+GFPP+
Sbjct: 632 RCLEEGIIASPRDGDIGAIFGIGFPPF 658
>sp|B0VLX4|FADB_ACIBS Fatty acid oxidation complex subunit alpha OS=Acinetobacter
baumannii (strain SDF) GN=fadB PE=3 SV=1
Length = 717
Score = 246 bits (628), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 256/509 (50%), Gaps = 13/509 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M + P K A G VDAVVA ++L+ A + R W A + + L
Sbjct: 168 MAMATPKKPAAALKDGAVDAVVAADKLLDAATDLVKQAISGRLNWKAKRQEKLEAVKLNP 227
Query: 62 AREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ F A+ A+ P + +D ++AG L+ EAE F K +
Sbjct: 228 LEQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAVTPQ 287
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ +F + K + G P V + A+LG G+MG GIA P+I+K+
Sbjct: 288 AEALIGLFINDQVVKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKD 345
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L G+ L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN
Sbjct: 346 IGNPQLALGMKEANNLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTEN 405
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K+ + A+ EK + I+ASNTSTI + + + + VG HFF+P H+MPL+E+
Sbjct: 406 PKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEV 465
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D I
Sbjct: 466 IRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQI 525
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGE 414
D ++KFG PMGP L D+VG + E FP+R YK I M E KR G+
Sbjct: 526 DNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGA-IEAMYEAKRLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY Y+ +K + K A + + + + ++I++ + + NE
Sbjct: 585 KNDVGFYKYELDKKGK---KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLALCNET 641
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R + I A++ D+A +MG+GFPP+R
Sbjct: 642 ARCLEDNIVATASEADMAMIMGIGFPPFR 670
>sp|A3QFP3|FADJ_SHELP Fatty acid oxidation complex subunit alpha OS=Shewanella loihica
(strain ATCC BAA-1088 / PV-4) GN=fadJ PE=3 SV=1
Length = 706
Score = 246 bits (627), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 274/536 (51%), Gaps = 25/536 (4%)
Query: 1 MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWAL-DILEHRRPWVATLYKTDKIEPL 59
MMLT K ++ ++A +GLVD VV + L+ TA + AL ++P ++T+ K + P+
Sbjct: 165 MMLTGKQLRAKQALKMGLVDDVVPESILLQTAIEMALAGARPAKKPKLSTVEKLLEGTPV 224
Query: 60 GEAREIFKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
G IF+ A Q K+ N P ID V GV G GL+ EA+ F L+ S
Sbjct: 225 GR-NIIFEQALKQVNKKTQGNYPAPEKIIDCVRQGVTKGIVKGLEVEAQHFGDLVVSNES 283
Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
++L IFFA K G D+ +P+ V KV +LGGGLMG GIA+ + PV +K+
Sbjct: 284 EALRSIFFATTEMKKESGAGDV--SPKAVNKVMVLGGGLMGGGIASVTTTKAKIPVRVKD 341
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
++E L + L VK+ MT + ++L+T +Y+ KD DMV+EA+ E+
Sbjct: 342 ISEIGLSNALAYAYKLLAKGVKRRHMTPAVRDNLMALMTTTTEYKGIKDADMVVEAVFED 401
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
++LK Q+ D+E+ C H I ASNTS++ + I E + ++G H+FSP MPL+E+
Sbjct: 402 LNLKHQMVKDVERECGEHTIFASNTSSLPIKQIAEAAERPENVIGLHYFSPVEKMPLVEV 461
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+ ++TSPQ I + +K KTPIVV + GF VNR+ Y A L+ G + +
Sbjct: 462 IAHDKTSPQTIATTVAFARKQGKTPIVVKDGAGFYVNRILALYMNEAANLLLEGQSVDHL 521
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
D+A+ KFG P+GP L D VG V + ER + D R G
Sbjct: 522 DKALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLADDRKGRKNG 581
Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-----AIDPKFAKLSEKDIVEMIFFPVVN 472
KGFY Y + K KK +++ S+ GV D + L+E+ +V+M+ N
Sbjct: 582 KGFYQYGAKSK-------KKLVDE--SVYGVLGLTPGADGEPIALAERCVVQML-----N 627
Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRFVTFIHRGFSKSSSCFKNLLCYFDQ 528
EA R EGI D DI ++ G+GFPP+ F + + + L Y DQ
Sbjct: 628 EAVRCLEEGIIASPRDGDIGAIFGIGFPPFLGGPFRYMDSLGAKHLVETLKRYQDQ 683
>sp|B2I2J9|FADB_ACIBC Fatty acid oxidation complex subunit alpha OS=Acinetobacter
baumannii (strain ACICU) GN=fadB PE=3 SV=1
Length = 717
Score = 245 bits (626), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 256/509 (50%), Gaps = 13/509 (2%)
Query: 2 MLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGE 61
M + P K A G VDAVVA ++L+ A + R W A + + L
Sbjct: 168 MAMATPKKPAAALKDGAVDAVVAADKLLDAATDLVKQAISGRLNWKAKRQEKLEAVKLNP 227
Query: 62 AREIFKFARAQ----ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSET 117
++ F A+ A+ P + +D ++AG L+ EAE F K +
Sbjct: 228 LEQMMAFNTAKGAVLAKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAVTPQ 287
Query: 118 CKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKE 177
++L+ +F + K + G P V + A+LG G+MG GIA P+I+K+
Sbjct: 288 AEALIGLFINDQVVKKASKQHEKGAHP--VNQAAVLGAGIMGGGIAYQAASKGTPIIMKD 345
Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
+ L G+ L +V++ KM + +T++ + L YE FK+VD+VIEA+ EN
Sbjct: 346 IGNPQLALGMKEANNLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTEN 405
Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
+K+ + A+ EK + I+ASNTSTI + + + + VG HFF+P H+MPL+E+
Sbjct: 406 PKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEV 465
Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
+R +TS + I + + +K+ KTPIVV +C GF VNR+ FPY A LLV+ G D I
Sbjct: 466 IRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQI 525
Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER---TYKSMIIPIMQEDKRAGE 414
D ++KFG PMGP L D+VG + E FP+R YK I M E KR G+
Sbjct: 526 DNVMSKFGWPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGA-IEAMYEAKRLGQ 584
Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
GFY Y+ +K + K A + + + + ++I++ + + NE
Sbjct: 585 KNDVGFYKYELDKKGK---KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLALCNET 641
Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYR 503
R + I A++ D+A +MG+GFPP+R
Sbjct: 642 VRCLEDNIVATASEADMAMIMGIGFPPFR 670
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,927,905
Number of Sequences: 539616
Number of extensions: 8034289
Number of successful extensions: 22811
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 21564
Number of HSP's gapped (non-prelim): 345
length of query: 535
length of database: 191,569,459
effective HSP length: 122
effective length of query: 413
effective length of database: 125,736,307
effective search space: 51929094791
effective search space used: 51929094791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)