Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>009396
MDDKTSIKSEMVESRKCSELESKCLELESEIEKKKTQFEKLEQKFKELEDEKNGIEEELK
ALKREKKGSEISLGVVDLTREGEGDGVAQLVVENKALESGMKRAENEAESLKKLKELESR
VSNEALEGTPSKHIISMEREKEGASSESKPERGRQVRKNLAFEEDRSLGKKMAPSTPGGV
RTASSGVIDICDSDDEPDVPHLLSIFGDKNIYISTDHPAEGTVGSDRETTPNESPKRAFF
KYSYEENVETCNDSVPVVTPKRKQASNIVTSDTESDEDDVPICKLKRRNIQEIVPNLVSS
EMKSCCVTVASPGDDNIENLVTPPRRRLRKGTGKFAGGKRSSSQTHETIGQQGIPATEDV
EDDESEDAGSDSESENLNGFIVDDGTEDSDGDDASSGAQDDSDMDFDEILSRLNRTKDQN
SEWELEADMLSAFGKDPELCMKAVCALYRQQTSEEKDCKGSLVYNSRGFSKFDAYRGTRL
AEFLTDGDPQGELKKSVKELREYDPKGLELCRTFASRYSKQLFDICKNKEDPYFP

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  009396
        (535 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2154202 - symbol:AT5G53220 "AT5G53220" species...   443  8.4e-42   1


>TAIR|locus:2154202 [details] [associations]
            symbol:AT5G53220 "AT5G53220" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
            [GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
            EMBL:CP002688 EMBL:AY924859 IPI:IPI00545743 RefSeq:NP_001032066.1
            RefSeq:NP_001119424.1 RefSeq:NP_200134.2 UniGene:At.51092
            EnsemblPlants:AT5G53220.1 EnsemblPlants:AT5G53220.2
            EnsemblPlants:AT5G53220.3 GeneID:835403 KEGG:ath:AT5G53220
            eggNOG:NOG238457 OMA:GESESRR ProtClustDB:CLSN2681487
            Genevestigator:Q5BPG9 Uniprot:Q5BPG9
        Length = 368

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 116/301 (38%), Positives = 157/301 (52%)

Query:   243 SYE-ENVETC--NDSVPVVTPKRKQ--ASNIVTSDTESDEDDVPICKLKRRNIQEIVPNL 297
             +YE E+VE C  N S P+   KRK+  AS+      + DED++PI  LK  N++   P  
Sbjct:    75 NYEDEDVEACDANTSSPLSRRKRKRVIASDDDDDADDDDEDNIPISILK--NLK---PT- 128

Query:   298 VSSEMKSCCVTVASPGDDNIENLVTPPRRRLRKGTGKFAGGKRSSSQTHETIGQQGIPAT 357
              + EM     T   P     E+     +RR+     K    +  S+ T   +G   IP T
Sbjct:   129 -NQEMSDLFDT---PNKGESESRRLSGQRRVSSRLNKKRVSEEVSASTERLVG---IPTT 181

Query:   358 XXXXXXXXXXXXXXXXXXNLNGFIVXXXXXXXXXXXXXXXXXXXXXXX---FDEILSRLN 414
                               +L+GFI+                          + +++SRL 
Sbjct:   182 DNAEDDETEEEGSESEGESLDGFIIDDDDSQESVSEKSDEIGVEESDGEVGYADVMSRLR 241

Query:   415 RTKD-QNSEWELEADMLSAFGKDPELCMKAVCALYRQQTSEEKDCKGSLVYNSRGFSKFD 473
             R K  +  +WE EADML+ FGKDPELCM+AVC L+R QT +EK  + S V N RGFSK D
Sbjct:   242 REKKPEKRKWEYEADMLADFGKDPELCMRAVCVLFRFQTEDEKVERSSHVSNGRGFSKVD 301

Query:   474 AYRGTRLAEFLTDGDPQGELKKSVKELREYDPKGLELCRTFASRYSKQLFDICKNKEDPY 533
             A RGT +A FLTDGD  G++KKSV+EL+ +D KG+E C   A +YSKQLF I  N+EDP+
Sbjct:   302 AVRGTSIALFLTDGDSAGDMKKSVEELKVFDFKGVEKCEELARKYSKQLFQIYNNREDPF 361

Query:   534 F 534
             F
Sbjct:   362 F 362


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.130   0.368    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      535       434   0.00087  118 3  11 23  0.49    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  250 KB (2134 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  40.13u 0.15s 40.28t   Elapsed:  00:00:02
  Total cpu time:  40.13u 0.15s 40.28t   Elapsed:  00:00:02
  Start:  Thu May  9 19:10:15 2013   End:  Thu May  9 19:10:17 2013

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