Query 009397
Match_columns 535
No_of_seqs 281 out of 1663
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 04:17:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009397.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009397hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 5E-103 2E-107 838.9 54.3 468 46-522 4-479 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 2.2E-98 8E-103 809.3 53.2 479 48-535 32-520 (520)
3 3iwj_A Putative aminoaldehyde 100.0 9E-98 3E-102 803.4 54.2 478 47-532 6-497 (503)
4 3ifg_A Succinate-semialdehyde 100.0 1E-97 4E-102 798.7 53.1 462 48-522 12-480 (484)
5 3rh9_A Succinate-semialdehyde 100.0 1.1E-97 4E-102 801.2 51.5 463 47-522 10-480 (506)
6 3ek1_A Aldehyde dehydrogenase; 100.0 3E-97 1E-101 797.6 52.5 460 48-522 32-498 (504)
7 3k2w_A Betaine-aldehyde dehydr 100.0 3.3E-97 1E-101 797.9 52.8 469 45-522 9-484 (497)
8 3r31_A BADH, betaine aldehyde 100.0 2.9E-97 1E-101 800.0 50.8 463 47-522 13-484 (517)
9 4e4g_A Methylmalonate-semialde 100.0 4E-97 1E-101 799.7 50.7 476 38-522 16-501 (521)
10 2o2p_A Formyltetrahydrofolate 100.0 9.3E-97 3E-101 796.1 51.6 464 49-522 37-513 (517)
11 3i44_A Aldehyde dehydrogenase; 100.0 2.9E-96 1E-100 789.4 54.9 464 47-523 24-495 (497)
12 1a4s_A ALDH, betaine aldehyde 100.0 2.3E-96 8E-101 791.9 53.8 470 43-522 14-492 (503)
13 1bxs_A Aldehyde dehydrogenase; 100.0 3E-96 1E-100 790.0 54.4 462 48-522 20-492 (501)
14 4f3x_A Putative aldehyde dehyd 100.0 8.3E-97 3E-101 793.8 49.6 462 47-522 24-493 (498)
15 1o04_A Aldehyde dehydrogenase, 100.0 2.8E-96 1E-100 790.0 52.4 462 48-522 19-491 (500)
16 3u4j_A NAD-dependent aldehyde 100.0 3.2E-96 1E-100 793.8 51.8 463 48-522 22-494 (528)
17 3jz4_A Succinate-semialdehyde 100.0 1.5E-95 5E-100 783.2 55.0 462 48-522 9-477 (481)
18 3pqa_A Lactaldehyde dehydrogen 100.0 6.2E-96 2E-100 784.7 51.5 451 51-522 2-460 (486)
19 3b4w_A Aldehyde dehydrogenase; 100.0 5.3E-96 2E-100 787.6 50.4 461 50-522 10-478 (495)
20 2d4e_A 5-carboxymethyl-2-hydro 100.0 1.4E-95 5E-100 787.9 53.8 464 49-522 27-501 (515)
21 3prl_A NADP-dependent glyceral 100.0 8.8E-96 3E-100 787.0 51.5 457 49-522 12-479 (505)
22 1wnd_A Putative betaine aldehy 100.0 1.2E-95 4E-100 784.1 52.3 463 45-522 20-491 (495)
23 2imp_A Lactaldehyde dehydrogen 100.0 1.8E-95 6E-100 782.0 53.1 461 49-522 7-475 (479)
24 2ve5_A BADH, betaine aldehyde 100.0 2.8E-95 1E-99 783.1 54.4 467 47-522 5-479 (490)
25 2j6l_A Aldehyde dehydrogenase 100.0 2.9E-95 1E-99 783.3 53.3 464 48-522 23-495 (500)
26 3r64_A NAD dependent benzaldeh 100.0 5.1E-95 1.8E-99 782.9 53.1 461 46-522 10-481 (508)
27 3ros_A NAD-dependent aldehyde 100.0 3.1E-95 1.1E-99 778.9 49.7 443 65-522 5-454 (484)
28 3qan_A 1-pyrroline-5-carboxyla 100.0 1.5E-94 5E-99 782.5 54.0 459 48-522 37-512 (538)
29 2w8n_A Succinate-semialdehyde 100.0 1.1E-94 3.8E-99 776.4 50.0 458 49-522 13-482 (487)
30 4h7n_A Aldehyde dehydrogenase; 100.0 1.7E-94 5.7E-99 773.6 50.6 462 61-534 3-473 (474)
31 3ty7_A Putative aldehyde dehyd 100.0 2.5E-94 8.6E-99 773.5 48.8 462 48-524 7-475 (478)
32 1uxt_A Glyceraldehyde-3-phosph 100.0 4.2E-94 1.4E-98 773.9 49.6 457 48-522 18-488 (501)
33 4dng_A Uncharacterized aldehyd 100.0 4.5E-94 1.5E-98 772.9 49.6 460 48-522 6-474 (485)
34 1euh_A NADP dependent non phos 100.0 1.6E-93 5.5E-98 766.2 50.4 453 49-522 5-470 (475)
35 1t90_A MMSDH, probable methylm 100.0 1.3E-93 4.4E-98 768.5 49.4 461 49-522 6-476 (486)
36 1uzb_A 1-pyrroline-5-carboxyla 100.0 6.6E-93 2.3E-97 767.8 52.5 459 48-522 37-512 (516)
37 3etf_A Putative succinate-semi 100.0 9.4E-93 3.2E-97 758.6 51.8 447 62-522 5-457 (462)
38 4e3x_A Delta-1-pyrroline-5-car 100.0 6.8E-91 2.3E-95 755.4 52.1 473 47-534 62-560 (563)
39 3ju8_A Succinylglutamic semial 100.0 6.4E-90 2.2E-94 740.6 50.9 451 50-522 7-467 (490)
40 3lns_A Benzaldehyde dehydrogen 100.0 7.3E-90 2.5E-94 734.5 46.3 441 63-522 5-453 (457)
41 2y53_A Aldehyde dehydrogenase 100.0 3.4E-89 1.2E-93 742.2 48.7 463 49-522 8-515 (534)
42 3sza_A Aldehyde dehydrogenase, 100.0 6.7E-89 2.3E-93 727.8 46.1 424 82-522 14-444 (469)
43 4f9i_A Proline dehydrogenase/d 100.0 5.5E-88 1.9E-92 770.2 52.8 459 48-522 531-1006(1026)
44 3v4c_A Aldehyde dehydrogenase 100.0 3E-87 1E-91 726.0 43.7 454 46-522 27-514 (528)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 1.4E-85 4.8E-90 710.1 47.0 443 60-522 3-479 (510)
46 3haz_A Proline dehydrogenase; 100.0 5.3E-81 1.8E-85 711.3 49.3 425 80-522 544-983 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 2.5E-77 8.5E-82 637.1 32.7 401 67-522 10-431 (463)
48 3k9d_A LMO1179 protein, aldehy 100.0 6.4E-76 2.2E-80 628.1 30.0 413 79-522 5-445 (464)
49 1vlu_A Gamma-glutamyl phosphat 100.0 3.8E-75 1.3E-79 621.0 27.2 392 87-522 15-436 (468)
50 3my7_A Alcohol dehydrogenase/a 100.0 6.6E-74 2.3E-78 610.6 32.3 420 80-528 1-451 (452)
51 4ghk_A Gamma-glutamyl phosphat 100.0 3.9E-72 1.3E-76 595.4 33.9 385 85-522 25-435 (444)
52 1o20_A Gamma-glutamyl phosphat 100.0 4E-72 1.4E-76 592.5 29.9 383 85-522 13-418 (427)
53 4gic_A HDH, histidinol dehydro 96.8 0.35 1.2E-05 49.3 24.0 256 179-522 120-399 (423)
54 1kae_A HDH, histidinol dehydro 96.6 0.78 2.7E-05 46.9 25.5 258 179-522 114-392 (434)
55 2fiu_A Conserved hypothetical 70.9 6.4 0.00022 31.7 5.3 60 376-459 16-76 (99)
56 3lo3_A Uncharacterized conserv 51.2 28 0.00096 27.4 5.7 61 375-459 14-75 (94)
57 2yvq_A Carbamoyl-phosphate syn 43.2 19 0.00064 30.9 3.7 58 242-299 63-132 (143)
58 1b93_A Protein (methylglyoxal 37.2 23 0.00078 30.8 3.3 111 190-328 12-134 (152)
59 3hhl_A RPA0582; alpha-beta-bar 35.0 47 0.0016 28.5 4.9 66 374-460 45-111 (143)
60 1vmd_A MGS, methylglyoxal synt 31.2 16 0.00056 32.6 1.4 118 184-329 21-151 (178)
61 3fgh_A Transcription factor A, 30.7 1.2E+02 0.0042 21.6 6.1 36 94-129 29-64 (67)
62 2xw6_A MGS, methylglyoxal synt 27.9 12 0.00041 31.9 -0.1 58 242-299 44-112 (134)
63 2eqz_A High mobility group pro 24.1 1.7E+02 0.0057 22.1 6.0 36 94-129 48-83 (86)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=5.3e-103 Score=838.85 Aligned_cols=468 Identities=26% Similarity=0.423 Sum_probs=437.2
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 009397 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (535)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~ 125 (535)
.+..++||+|+|+.+.++++++++||+||+++++++.++.+|+++||++|++||+.|+++|..+|.++|+++++.|++|+
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhh
Q 009397 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 126 ~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
++|++++++|+|||+.+++..|+..+++.++|+++.+++..... .+.. .....+++++|+|||++|+|||||+...
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~P~GVv~~I~PwNfP~~~~ 159 (490)
T 2wme_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQ-IPLR---ETSFVYTRREPLGVVAGIGAWNYPVQIA 159 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEE-EEEE---TTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcc-cccc---CCcceeEEecceeEEEEeccccCcchhh
Confidence 99999999999999999965679999999999999887654322 2211 2355788999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|++ +.++.|++ +|++|+||||+.+|+
T Consensus 160 ~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~----~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~ 235 (490)
T 2wme_A 160 LWKSAPALAAGNAMIFKPSEVTPLTALKLAEIY----TEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 235 (490)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH----HHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred hhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHH----HHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHH
Confidence 999999999999999999999999999887775 55899999999999975 78899988 899999999999998
Q ss_pred HHHH-HHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 283 MIMR-NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 283 ~v~~-~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
.+++ .+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++
T Consensus 236 ~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~v 315 (490)
T 2wme_A 236 KVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRL 315 (490)
T ss_dssp HHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcC
Confidence 8876 557789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++|||+++.++++++++|++++++||++++||++........|+|++|||+.+++++|++++||+||||++|
T Consensus 316 Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v 395 (490)
T 2wme_A 316 GDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSI 395 (490)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEE
Confidence 99999999999999999999999999999999999999999876655678999999999999999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+||++|.+|| ++|+
T Consensus 396 ~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl-~~ft 474 (490)
T 2wme_A 396 LVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTL-AHYT 474 (490)
T ss_dssp EEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHH-HTTE
T ss_pred EEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHH-HHhh
Confidence 9999999999999999999999999999999999999999999999998766655666 8999999999999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 475 ~~K~v 479 (490)
T 2wme_A 475 RIKSV 479 (490)
T ss_dssp EEEEE
T ss_pred ceeEE
Confidence 99998
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=2.2e-98 Score=809.28 Aligned_cols=479 Identities=25% Similarity=0.406 Sum_probs=440.0
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHh--HHHhhcCHHHHHHHHHHHHHHHHHhH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEHQ 125 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~--~~W~~~~~~~R~~iL~~la~~l~~~~ 125 (535)
++++||+|+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| ..|+++|..+|.++|+++++.|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR 111 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence 4568999999998888999999999999999999999999999999999999 88999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhh
Q 009397 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 126 ~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
++|++++++|+||+..++. +|+..+++.++|+++..+++.... .+... .....+++++|+|||++|+|||||+...
T Consensus 112 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 187 (520)
T 3ed6_A 112 EALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEM-IDSPI--PDTESKIVKEPVGVVTQITPWNYPLLQA 187 (520)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEE-ECCSS--TTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCee-cccCC--CCCcccccccCccEEEEECCCccHHHHH
Confidence 9999999999999999995 799999999999999887754322 22111 2346788999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.+ +.++.|++ ++++|+||||+.+|+
T Consensus 188 ~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~----~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~ 263 (520)
T 3ed6_A 188 SWKIAPALATGCSLVMKPSEITPLTTIRVFELM----EEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGK 263 (520)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHH----HHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHH----HHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHH
Confidence 999999999999999999999999998877765 56899999999999964 78889988 899999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 264 ~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG 343 (520)
T 3ed6_A 264 HIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLG 343 (520)
T ss_dssp HHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBC
T ss_pred HHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
+|.++++++||++++.++++++++|++++++||++++||.+...+....|+|++|||+.+++++|++++||+||||++|+
T Consensus 344 ~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 423 (520)
T 3ed6_A 344 NGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVE 423 (520)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEE
Confidence 99999999999999999999999999999999999999986432223579999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCce
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+||++|.+|| ++|++
T Consensus 424 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl-~~~t~ 502 (520)
T 3ed6_A 424 GFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGL-EEYLV 502 (520)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHH-HTTEE
T ss_pred EeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHH-HHhhc
Confidence 999999999999999999999999999999999999999999999998766555556 8999999999999 58999
Q ss_pred eeeec-CCCCCCCccccC
Q 009397 519 LKMLP-HFSVPAIWWCQG 535 (535)
Q Consensus 519 ~k~~~-~~~~~~~~~~~~ 535 (535)
.|++- .+..++.-||++
T Consensus 503 ~k~v~~~~~~~~~~~~~~ 520 (520)
T 3ed6_A 503 SKHILTNTNPQLVNWFSK 520 (520)
T ss_dssp EEEEEEESSCCCCCCSCC
T ss_pred eEEEEEcCCCCccCccCC
Confidence 99982 222334456764
No 3
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=9e-98 Score=803.42 Aligned_cols=478 Identities=28% Similarity=0.454 Sum_probs=438.3
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH-----HHhhcCHHHHHHHHHHHHHHH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-----VWAKSSFKQRRQFLRILLKYI 121 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~-----~W~~~~~~~R~~iL~~la~~l 121 (535)
...++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l 85 (503)
T 3iwj_A 6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKV 85 (503)
T ss_dssp CCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHH
T ss_pred CCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHH
Confidence 445789999999988889999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchh
Q 009397 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201 (535)
Q Consensus 122 ~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P 201 (535)
++|+++|++++++|+||+..++ ..|+..+++.++++++..+++......+..........+++++|+|||++|+|||||
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T 3iwj_A 86 TEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP 164 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchH
Confidence 9999999999999999999999 479999999999999988876544322211111235678999999999999999999
Q ss_pred hhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCCh
Q 009397 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSP 278 (535)
Q Consensus 202 ~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~ 278 (535)
+...++++++||++||+||+|||+.+|+++.++.++ |.++|+|+|++|+|+|.+ +.++.|+. ++++|+||||+
T Consensus 165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l----~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~ 240 (503)
T 3iwj_A 165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEI----CKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSS 240 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHH----HHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCH
T ss_pred HHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHH----HHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcH
Confidence 999999999999999999999999999999887776 556899999999999965 77888987 89999999999
Q ss_pred HHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhc
Q 009397 279 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (535)
Q Consensus 279 ~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~ 358 (535)
.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 241 ~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~ 320 (503)
T 3iwj_A 241 ATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKN 320 (503)
T ss_dssp HHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccce
Q 009397 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438 (535)
Q Consensus 359 l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPv 438 (535)
+++|+|.++++++|||+++.++++++++|++++++|+++++||.+... ...|+|++|||+.+++++|++++||+||||
T Consensus 321 ~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 398 (503)
T 3iwj_A 321 IKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEH--LKKGFFIEPTIITDVTTNMQIWREEVFGPV 398 (503)
T ss_dssp CCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CCSSSCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred ccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCcc--CCCCceeCCeeeecCCCCchhhCceeeCce
Confidence 999999999999999999999999999999999999999999985321 257999999999999999999999999999
Q ss_pred eeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhc
Q 009397 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILN 514 (535)
Q Consensus 439 l~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~ 514 (535)
++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+|+++|.+|+ +
T Consensus 399 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~-~ 477 (503)
T 3iwj_A 399 LCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGL-D 477 (503)
T ss_dssp EEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHH-H
T ss_pred EEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHH-H
Confidence 9999999999999999999999999999999999999999999999999997655444455 8999999999999 5
Q ss_pred cCceeeee--cCCCCCCCcc
Q 009397 515 DPTKLKML--PHFSVPAIWW 532 (535)
Q Consensus 515 ~~~~~k~~--~~~~~~~~~~ 532 (535)
+|++.|++ .....+..||
T Consensus 478 ~f~~~k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 478 NYLSVKQVTQYISEEPWGWY 497 (503)
T ss_dssp TTEEEEEEEEECCSSCCCCS
T ss_pred HhhCeEEEEEeCCCCccccc
Confidence 89999998 3333344454
No 4
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1e-97 Score=798.72 Aligned_cols=462 Identities=29% Similarity=0.485 Sum_probs=430.6
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44689999999888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..+++ +|+..+++.++|++...++..... .+.. ..+...+++++|+|||++|+|||||+...++
T Consensus 92 la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 167 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDT-LPTP--DANKRIVVVKEPIGVCAAITPWNFPAAMIAR 167 (484)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEE-ECCS--STTEEEEEEEEECSSEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCcc-cccc--CCCceeEEEecCCcEEEEECCCcChHHHHHH
Confidence 99999999999999994 899999999999998877643321 1111 1245678899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v 284 (535)
++++||++||+||+|||+.+|+++..++++ +.++|+|+|++|+|+|.+ +.++.|++ ++++|.||||+.+|+.|
T Consensus 168 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l----~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i 243 (484)
T 3ifg_A 168 KVGPALAAGCPIVVKPAESTPFSALAMAFL----AERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLL 243 (484)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHH----HHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHH----HHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999887776 456899999999999865 77889988 89999999999999999
Q ss_pred HHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCC
Q 009397 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (535)
Q Consensus 285 ~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (535)
++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 244 ~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 323 (484)
T 3ifg_A 244 MAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRG 323 (484)
T ss_dssp HHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
.++++++|||+++.++++++++|++++++|+++++||.+.. ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 399 (484)
T 3ifg_A 324 TESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHA----LGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRF 399 (484)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCT----TCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEE
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccC----CCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEe
Confidence 99999999999999999999999999999999999998532 37999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+||++|.+|| ++|++.|
T Consensus 400 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl-~~~~~~k 478 (484)
T 3ifg_A 400 ASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGI-DDYVVIK 478 (484)
T ss_dssp CCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTT-GGGEEEE
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHH-HHhhceE
Confidence 9999999999999999999999999999999999999999999997554445556 9999999999999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
++
T Consensus 479 ~v 480 (484)
T 3ifg_A 479 YL 480 (484)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 5
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.1e-97 Score=801.21 Aligned_cols=463 Identities=26% Similarity=0.415 Sum_probs=434.6
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
..+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+.+|..+|.++|+++++.|++|++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE 89 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45678999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeee-ecceEEEEEcCCchhhhhh
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEF-HPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~PlGVv~~i~p~n~P~~~~ 205 (535)
+|++++++|+||+..++. +|+..+++.++|++++.+++.... .+.. .+...++++ +|+|||++|+|||||+...
T Consensus 90 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 164 (506)
T 3rh9_A 90 EIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHT-IPEK---PKDCTWTVHYRPVGVTGLIVPWNFPIGMI 164 (506)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEE-CSCC---GGGCEEEEEEEECCSEEEECCSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccC---CCceeeEeecccceEEEEECCCchHHHHH
Confidence 999999999999999996 899999999999999998875532 2221 245677888 9999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++.+++++ +.++|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|+
T Consensus 165 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l----~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~ 240 (506)
T 3rh9_A 165 AKKLSAALAAGCPSVIKPASETPLTMIAFFSV----MDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGR 240 (506)
T ss_dssp HHHHHHHHHHTCCEEEECCTTSCHHHHHHHHH----HTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCccHHHHHHHHHH----HHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999887776 556899999999999965 77888888 799999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
.|++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 241 ~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 320 (506)
T 3rh9_A 241 KLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVG 320 (506)
T ss_dssp HHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
+|.++++++|||+++.++++++++|++++++|+++++||.+.+ ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 321 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 397 (506)
T 3rh9_A 321 DGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAE---LGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMA 397 (506)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGG---CCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEE
T ss_pred CCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCC---CCCCcEECCeEEccCCCCChhhcccccCcEEEEE
Confidence 9999999999999999999999999999999999999998532 1279999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCce
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+....|| .||+||++|++|| ++|++
T Consensus 398 ~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl-~~ft~ 476 (506)
T 3rh9_A 398 LFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGL-FEFVE 476 (506)
T ss_dssp EECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHH-TTTEE
T ss_pred EeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHH-HHhcc
Confidence 999999999999999999999999999999999999999999999998766655566 8999999999999 58999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|++
T Consensus 477 ~K~v 480 (506)
T 3rh9_A 477 AQTV 480 (506)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9997
No 6
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=3e-97 Score=797.56 Aligned_cols=460 Identities=27% Similarity=0.449 Sum_probs=429.5
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 111 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD 111 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..+++ +|+..+++.++|++...++..... .+.. ..+...+++++|+|||++|+|||||+...++
T Consensus 112 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 187 (504)
T 3ek1_A 112 IALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDT-IPAP--QNGQRLTVIRQPVGVTAAITPWNFPAAMITR 187 (504)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEE-ECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccc--cccccceeeccCceEEEEECCCcchHHHHHH
Confidence 99999999999999985 799999999999998877643321 1111 1235678899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v 284 (535)
++++||++||+||+|||+.+|+++.++.++ +.++|+|+|++|+|+|.+ +.++.|++ +|++|+||||+.+|+.|
T Consensus 188 ~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l----~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i 263 (504)
T 3ek1_A 188 KAAPALAAGCTMIVRPADLTPLTALALGVL----AEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLL 263 (504)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHH----HHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHH----HHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999877776 556899999999999865 77888988 89999999999999999
Q ss_pred HHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCC
Q 009397 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (535)
Q Consensus 285 ~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (535)
++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 264 ~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 343 (504)
T 3ek1_A 264 MAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNG 343 (504)
T ss_dssp HHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
.++++++||++++.++++++++|++++++|+++++||.+ ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 344 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 417 (504)
T 3ek1_A 344 TEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAF 417 (504)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEE
T ss_pred ccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCceECCeEEecCCCcChhhcccccCcEEEEEEe
Confidence 999999999999999999999999999999999999984 36899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+||++|.+|| ++|++.|
T Consensus 418 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl-~~~t~~K 496 (504)
T 3ek1_A 418 DTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGI-EEYLETK 496 (504)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSG-GGGEEEE
T ss_pred CCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHH-HHhhceE
Confidence 9999999999999999999999999999999999999999999997654444555 8999999999999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
++
T Consensus 497 ~v 498 (504)
T 3ek1_A 497 YI 498 (504)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 7
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=3.3e-97 Score=797.88 Aligned_cols=469 Identities=26% Similarity=0.419 Sum_probs=433.6
Q ss_pred CCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 45 ~~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
....+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|+++
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 88 (497)
T 3k2w_A 9 HFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIREN 88 (497)
T ss_dssp CCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTT
T ss_pred cccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 34566789999999988889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++. .|+..+++.++|++++.+++..+.. +.. ..+...+++++|+|||++|+|||||+..
T Consensus 89 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 164 (497)
T 3k2w_A 89 KHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDIL-PSD--NQDEKIYIHKVPRGVVVGITAWNFPLAL 164 (497)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEE-ECS--STTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-ccC--CCCcceeEEEcCCceEEEECCCccHHHH
Confidence 99999999999999999995 8999999999999999888754422 111 1345678899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.++++++||++||+||+|||+.+|+++.+++++ |.++|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l----l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G 240 (497)
T 3k2w_A 165 AGRKIGPALITGNTMVLKPTQETPLATTELGRI----AKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAG 240 (497)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHH----HHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHH----HHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHH
Confidence 999999999999999999999999999887776 456999999999999955 78888888 79999999999999
Q ss_pred HHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 282 ~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
+.|++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 241 ~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 320 (497)
T 3k2w_A 241 KQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKV 320 (497)
T ss_dssp HHHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++|||+++.++++++++|++++++|+++++||++......+.|+|++|||+.+++++|++++||+||||++|
T Consensus 321 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v 400 (497)
T 3k2w_A 321 GDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPI 400 (497)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEE
Confidence 99999999999999999999999999999999999999998422212237899999999999999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+....|| .||+||++|.+|| ++|+
T Consensus 401 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl-~~ft 479 (497)
T 3k2w_A 401 VKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGL-EQYL 479 (497)
T ss_dssp EEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHH-HTTE
T ss_pred EEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHH-HHhc
Confidence 9999999999999999999999999999999999999999999999998766655556 8999999999999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 480 ~~k~v 484 (497)
T 3k2w_A 480 EKKTV 484 (497)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 99997
No 8
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2.9e-97 Score=799.99 Aligned_cols=463 Identities=27% Similarity=0.399 Sum_probs=430.8
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
..+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|+++++
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 92 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERND 92 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchh---hcCCcccCCCcccccccceeeeecceEEEEEcCCchhhh
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK---WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~ 203 (535)
+|++++++|+||+..++ |+..+++.++|+++..++ ++.....+.. .+. .+++++|+|||++|+|||||+.
T Consensus 93 ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~---~~~-~~~~~~P~GVV~~I~PwN~P~~ 165 (517)
T 3r31_A 93 ALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLG---GDF-AYTKRVPLGVCVGIGAWNYPQQ 165 (517)
T ss_dssp HHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECS---SSE-EEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccC---CCc-ceEEEcCccEEEEECCCcchHH
Confidence 99999999999999888 999999999999988776 2332222211 234 7899999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHH
Q 009397 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 204 ~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
..++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|..+.++.|++ .||+|+||||+.+|
T Consensus 166 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll----~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G 241 (517)
T 3r31_A 166 IACWKAAPALVAGNAMVFKPSENTPLGALKIAEIL----IEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTG 241 (517)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHH----HHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHH----HHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHH
Confidence 99999999999999999999999999998877765 5689999999999996688899988 79999999999999
Q ss_pred HHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 282 ~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
+.|++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 242 ~~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 321 (517)
T 3r31_A 242 RKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMIL 321 (517)
T ss_dssp HHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++|||+++.++++++++|++++++|+++++|| +........|+|++|||+.+++++|++++||+||||++|
T Consensus 322 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 400 (517)
T 3r31_A 322 GDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCV 400 (517)
T ss_dssp CCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEE
T ss_pred CCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEE
Confidence 9999999999999999999999999999999999999999 421112357999999999999999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+||++|++|| ++|+
T Consensus 401 ~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl-~~ft 479 (517)
T 3r31_A 401 LDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAAL-EHYS 479 (517)
T ss_dssp EEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGG-GGSE
T ss_pred EEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHH-HHhh
Confidence 9999999999999999999999999999999999999999999999997655555556 9999999999999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 480 ~~K~v 484 (517)
T 3r31_A 480 ELKTV 484 (517)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 99997
No 9
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4e-97 Score=799.67 Aligned_cols=476 Identities=20% Similarity=0.306 Sum_probs=433.3
Q ss_pred CCCCCCCCCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHH
Q 009397 38 VLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117 (535)
Q Consensus 38 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~l 117 (535)
++-|-.+....+.+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++
T Consensus 16 ~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 95 (521)
T 4e4g_A 16 ENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKF 95 (521)
T ss_dssp --------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred hhhhHhhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 36787777777889999999998888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcC
Q 009397 118 LKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 197 (535)
Q Consensus 118 a~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p 197 (535)
++.|++|+++|++++++|+||+..++. +|+..+++.++|+++..+... ....+. ...+...+++++|+|||++|+|
T Consensus 96 a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~-~~~~~~--~~~~~~~~~~~~P~GVV~~I~P 171 (521)
T 4e4g_A 96 VQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQK-SEFTEG--AGPGIDMYSIRQPVGIGAGITP 171 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTC-EEEEEE--EETTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc-Cccccc--CCCCcceeEEEcCCcEEEEECC
Confidence 999999999999999999999999994 899999999999987655432 221110 0123457889999999999999
Q ss_pred CchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEe
Q 009397 198 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFV 275 (535)
Q Consensus 198 ~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~ 275 (535)
||||+...++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+.+.++.|++ +||+|+||
T Consensus 172 wN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~----~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FT 247 (521)
T 4e4g_A 172 FNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELM----IEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFV 247 (521)
T ss_dssp SSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHH----HHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEE
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHH----HHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEE
Confidence 99999999999999999999999999999999998877764 5689999999999998777888888 79999999
Q ss_pred CChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecc-cHHHHHHHHHH
Q 009397 276 GSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAK 354 (535)
Q Consensus 276 GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~-v~d~f~~~L~~ 354 (535)
||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +||+|+++|++
T Consensus 248 GS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~ 327 (521)
T 4e4g_A 248 GSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVP 327 (521)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCccccccc
Q 009397 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 434 (535)
Q Consensus 355 ~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~ 434 (535)
+++++++|+|.++++++||++++.++++++++|++++++||++++||.+...+....|+|++|||+.+++++|++++||+
T Consensus 328 ~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 407 (521)
T 4e4g_A 328 MVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEI 407 (521)
T ss_dssp HHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCC
T ss_pred HHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcc
Confidence 99999999999999999999999999999999999999999999999865433346799999999999999999999999
Q ss_pred ccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCC--CcC
Q 009397 435 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFD--EFD 507 (535)
Q Consensus 435 fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G--~~~ 507 (535)
||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+. ...|| .||+| +++
T Consensus 408 FGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~ 487 (521)
T 4e4g_A 408 FGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQH 487 (521)
T ss_dssp CSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBS
T ss_pred cCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccc
Confidence 999999999999999999999999999999999999999999999999999999975433 33455 99999 799
Q ss_pred cHHHhhccCceeeee
Q 009397 508 SVHVILNDPTKLKML 522 (535)
Q Consensus 508 g~~gl~~~~~~~k~~ 522 (535)
|++|| ++|++.|++
T Consensus 488 G~~gl-~~ft~~K~v 501 (521)
T 4e4g_A 488 GTDSI-KFWTRTKTI 501 (521)
T ss_dssp HHHHH-HHTEEEEEE
T ss_pred hHHHH-HHhheEEEE
Confidence 99999 589999987
No 10
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=9.3e-97 Score=796.11 Aligned_cols=464 Identities=25% Similarity=0.411 Sum_probs=429.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|+++++.|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4579999999877778999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcc-cccccceeeeecceEEEEEcCCchhhhhh
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
+|++++++|+||++.++..+|+..+++.++|+++.++++.... .+.... ......+++++|+|||++|+|||||+...
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 195 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMML 195 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHH
Confidence 9999999999999999965899999999999999888765432 221100 11225688999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.+ +.++.|++ +|++|+||||+.+|+
T Consensus 196 ~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~----~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~ 271 (517)
T 2o2p_A 196 SWKTAACLAAGNTVVIKPAQVTPLTALKFAELT----LKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGK 271 (517)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHH----HHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCccHHHHHHHHHHH----HHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHH
Confidence 999999999999999999999999999887775 56899999999999965 67888888 899999999999999
Q ss_pred HHHHHHh-ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 283 MIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 283 ~v~~~aa-~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 272 ~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~v 351 (517)
T 2o2p_A 272 HIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKI 351 (517)
T ss_dssp HHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCC
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++|||+++.++++++++|++++++|+++++||++.. ..|+|++|||+.+++++|++++||+||||++|
T Consensus 352 Gdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 427 (517)
T 2o2p_A 352 GNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP----RPGFFFQPTVFTDVEDHMYIAKEESFGPIMII 427 (517)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCS----SSSCCBCCEEEESCCTTSGGGTSCCCSSEEEE
T ss_pred CCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCC----CCCCeECCEEEeCCCCCChhhhccccccEEEE
Confidence 99999999999999999999999999999999999999998431 36899999999999999999999999999999
Q ss_pred eecCC--HHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhcc
Q 009397 442 MKFNT--DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILND 515 (535)
Q Consensus 442 ~~~~~--~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~ 515 (535)
++|+| +||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+||++|.+|| ++
T Consensus 428 ~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l-~~ 506 (517)
T 2o2p_A 428 SRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAAL-NE 506 (517)
T ss_dssp EEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHH-HT
T ss_pred EEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHH-HH
Confidence 99999 99999999999999999999999999999999999999999997654444556 8999999999999 58
Q ss_pred Cceeeee
Q 009397 516 PTKLKML 522 (535)
Q Consensus 516 ~~~~k~~ 522 (535)
|++.|++
T Consensus 507 ~~~~k~v 513 (517)
T 2o2p_A 507 YLRIKTV 513 (517)
T ss_dssp TEEEEEE
T ss_pred hCCceEE
Confidence 9999987
No 11
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=2.9e-96 Score=789.40 Aligned_cols=464 Identities=27% Similarity=0.411 Sum_probs=428.7
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
..+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|+++++
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 103 (497)
T 3i44_A 24 NKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSS 103 (497)
T ss_dssp EECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999998888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceee-eecceEEEEEcCCchhhhhh
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE-FHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~PlGVv~~i~p~n~P~~~~ 205 (535)
+|++++++|+||+..+++.+|+..+++.++++++.......+...+ .+...+++ ++|+|||++|+|||||+...
T Consensus 104 ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 178 (497)
T 3i44_A 104 DMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-----EGNEQAILHYDAIGVVGLITPWNWPMNQV 178 (497)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-----TTCSSCEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-----CCceeEEEeecCceEEEEECCCcchHHHH
Confidence 9999999999999999966899999999999998877654432221 12346778 99999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++.+++++ |.++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l----~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~ 254 (497)
T 3i44_A 179 TLKVIPALLAGCTMVLKPSEIAPLSAMLFAEI----LDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGK 254 (497)
T ss_dssp HHHHHHHHHHTCEEEEECCTTSCHHHHHHHHH----HHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCcccHHHHHHHHHH----HHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHH
Confidence 99999999999999999999999999887776 556899999999999965 78889987 899999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
.|++.+++++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 255 ~i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG 333 (497)
T 3i44_A 255 DISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVG 333 (497)
T ss_dssp HHHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
+|.++++++||++++.++++++++|++++++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|+
T Consensus 334 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~-~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 412 (497)
T 3i44_A 334 PGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLP-MGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLL 412 (497)
T ss_dssp CTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCC-CcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEE
Confidence 9999999999999999999999999999999999999994211 112479999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCce
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+. ......|| .||+||++|.+|| ++|++
T Consensus 413 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~-~~~~~~PfGG~k~SG~Gr~~G~~gl-~~~t~ 490 (497)
T 3i44_A 413 PFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGH-ELPGGSYFGGVKFSGRAREGGLWGI-KEFLD 490 (497)
T ss_dssp EESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETTC-CCCTTCCBCCSGGGCCCCBSHHHHH-HTTEE
T ss_pred ecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECCC-CCCCCCCcCCcCcCcCCccchHHHH-HHhcc
Confidence 999999999999999999999999999999999999999999999963 33333445 8999999999999 58999
Q ss_pred eeeec
Q 009397 519 LKMLP 523 (535)
Q Consensus 519 ~k~~~ 523 (535)
.|++-
T Consensus 491 ~K~v~ 495 (497)
T 3i44_A 491 TKAIS 495 (497)
T ss_dssp EEEES
T ss_pred eeEEE
Confidence 99873
No 12
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=2.3e-96 Score=791.93 Aligned_cols=470 Identities=28% Similarity=0.421 Sum_probs=433.4
Q ss_pred CCCCCCcccccCCcccCCCCCCe-EEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHH
Q 009397 43 NQTPDNSFIYIPPRGRTPQSETK-VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121 (535)
Q Consensus 43 ~~~~~~~~~~i~~~~~~~~~~~~-~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l 121 (535)
......+.+||+|+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|
T Consensus 14 ~~~~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l 93 (503)
T 1a4s_A 14 SVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARII 93 (503)
T ss_dssp TCCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred CccccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHH
Confidence 34445677899999998877778 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchh
Q 009397 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201 (535)
Q Consensus 122 ~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P 201 (535)
++|+++|++++++|+||+..++ .+|+..+++.++|++++.+++... ..+.. .+...+++++|+|||++|+|||||
T Consensus 94 ~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P 168 (503)
T 1a4s_A 94 RERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSGQ-HIQLP---GGAFAYTRREPLGVCAGILAWNYP 168 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEE-EEECG---GGCEEEEEEEECSEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCC-cccCC---CCceeEEEEecCceEEEECCCcch
Confidence 9999999999999999999999 589999999999999998876542 22221 233568899999999999999999
Q ss_pred hhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChH
Q 009397 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPG 279 (535)
Q Consensus 202 ~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~ 279 (535)
+...++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.++.++.|++ ++++|+||||+.
T Consensus 169 ~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~----~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~ 244 (503)
T 1a4s_A 169 FMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIF----HEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVP 244 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH----HHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH----HHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHH
Confidence 9999999999999999999999999999999887775 5689999999999985577888888 799999999999
Q ss_pred HHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcc
Q 009397 280 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359 (535)
Q Consensus 280 ~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l 359 (535)
+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 245 ~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 324 (503)
T 1a4s_A 245 TGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAI 324 (503)
T ss_dssp HHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCC--CCCCceeccEEEEcCCCCCcccccccccc
Q 009397 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE--GAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (535)
Q Consensus 360 ~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~--~~~g~~~~Ptvl~~v~~~~~i~~~E~fgP 437 (535)
++|+|.++++++|||+++.++++++++|++++++|+++++||+....+. ...|+|++|||+.+++++|++++||+|||
T Consensus 325 ~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 404 (503)
T 1a4s_A 325 VVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGP 404 (503)
T ss_dssp CBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSS
T ss_pred CCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCc
Confidence 9999999999999999999999999999999999999999997531111 13689999999999999999999999999
Q ss_pred eeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhh
Q 009397 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVIL 513 (535)
Q Consensus 438 vl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~ 513 (535)
|++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+||++|.+||
T Consensus 405 Vl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l- 483 (503)
T 1a4s_A 405 VMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATV- 483 (503)
T ss_dssp EEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGG-
T ss_pred eEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHH-
Confidence 99999999999999999999999999999999999999999999999999997655444556 8999999999999
Q ss_pred ccCceeeee
Q 009397 514 NDPTKLKML 522 (535)
Q Consensus 514 ~~~~~~k~~ 522 (535)
++|++.|++
T Consensus 484 ~~f~~~k~v 492 (503)
T 1a4s_A 484 DYYSQLKTV 492 (503)
T ss_dssp GGSEEEEEE
T ss_pred HHhcCceEE
Confidence 589999998
No 13
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=3e-96 Score=790.00 Aligned_cols=462 Identities=26% Similarity=0.415 Sum_probs=431.2
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH---HHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~---~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
...+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|+++++.|++|
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 44689999999887788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++..+|+..+++.++|++++.+++..+.. +.. .+...+++++|+|||++|+|||||+..
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~-~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~ 175 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTI-PMD---GNFFTYTRSEPVGVCGQIIPWNFPLLM 175 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEE-CCS---SSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCee-ecc---CCcceeEEecCCceEEEECCCcchHHH
Confidence 9999999999999999988678999999999999999888765421 211 234568899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.++++++||++||+||+|||+.+|+++..++++ +.++|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l----~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 251 (501)
T 1bxs_A 176 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSL----IKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVG 251 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHH----HHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCeeeccCCCccHHHHHHHHHH----HHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHH
Confidence 999999999999999999999999999887776 456899999999999954 67888988 79999999999999
Q ss_pred HHHHHHHh-ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhccc
Q 009397 282 RMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (535)
Q Consensus 282 ~~v~~~aa-~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (535)
+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 252 ~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 331 (501)
T 1bxs_A 252 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYV 331 (501)
T ss_dssp HHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcC
Confidence 99999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceee
Q 009397 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (535)
Q Consensus 361 ~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~ 440 (535)
+|+|.++++++||++++.++++++++|++++++|+++++||++. ...|+|++|||+.+++++|++++||+||||++
T Consensus 332 ~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 407 (501)
T 1bxs_A 332 LGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQ 407 (501)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred CCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEecCCCCCHHHhcccccceEE
Confidence 99999999999999999999999999999999999999999742 13689999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccC
Q 009397 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDP 516 (535)
Q Consensus 441 v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~ 516 (535)
|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+||++|.+|+ ++|
T Consensus 408 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l-~~f 486 (501)
T 1bxs_A 408 IMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGF-HEY 486 (501)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHH-HTT
T ss_pred EEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHH-HHh
Confidence 99999999999999999999999999999999999999999999999997655444555 8999999999999 589
Q ss_pred ceeeee
Q 009397 517 TKLKML 522 (535)
Q Consensus 517 ~~~k~~ 522 (535)
++.|++
T Consensus 487 ~~~K~v 492 (501)
T 1bxs_A 487 TEVKTV 492 (501)
T ss_dssp EEEEEE
T ss_pred hCeeEE
Confidence 999997
No 14
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=8.3e-97 Score=793.76 Aligned_cols=462 Identities=24% Similarity=0.377 Sum_probs=431.3
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
..+++||+|+|+.+.++ +++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|++
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEAD 102 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45679999999988776 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
+|++++++|+||+..++..+|+..+++.++|+++.++++.... .+.. ..+...+++++|+|||++|+|||||+...+
T Consensus 103 ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (498)
T 4f3x_A 103 EFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPA-AGEY--LPGHTSMIRRDPIGIVGSIAPWNYPLMMMA 179 (498)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEEC-BEEE--ETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCcc-ccCC--cccccceEEEcCcceEEEECCCchHHHHHH
Confidence 9999999999999999955899999999999999887753321 1111 124567889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
+++++||++||+||+|||+.+|+++.++++++. ++ +|+|++|+|+|++ +.++.|++ ++++|+||||+.+|+.
T Consensus 180 ~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~----ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~ 254 (498)
T 4f3x_A 180 WKLAPAIGGGNTVVFKPSEQTPLTALKLARLIA----DI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKK 254 (498)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH----TT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCcccHHHHHHHHHHHH----Hh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 999999999999999999999999998887754 46 9999999999965 68899988 8999999999999999
Q ss_pred HHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCC
Q 009397 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (535)
Q Consensus 284 v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (535)
|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 255 i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (498)
T 4f3x_A 255 VLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNL 334 (498)
T ss_dssp HHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHcCC-cEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGA-EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 364 ~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga-~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
|.++++++|||+++.++++++++|++++++|+ ++++||.+. ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 335 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 410 (498)
T 4f3x_A 335 DDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTG----SDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVT 410 (498)
T ss_dssp SSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBC----CSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccC----CCCCcEECCEEeecCCCCChhhCCceeCcEEEEE
Confidence 99999999999999999999999999999999 999999853 2479999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCce
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|+ .||+||++|.+|| ++|++
T Consensus 411 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l-~~~t~ 489 (498)
T 4f3x_A 411 RFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYAL-EDYTA 489 (498)
T ss_dssp EECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHH-HHTEE
T ss_pred EeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHH-HHhhc
Confidence 999999999999999999999999999999999999999999999998766555556 8999999999999 58999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|++
T Consensus 490 ~k~v 493 (498)
T 4f3x_A 490 VRHI 493 (498)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9987
No 15
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=2.8e-96 Score=790.04 Aligned_cols=462 Identities=27% Similarity=0.403 Sum_probs=430.7
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH---HHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~---~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
+..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|++|
T Consensus 19 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 98 (500)
T 1o04_A 19 CNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERD 98 (500)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHH
Confidence 34589999999887788999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++...|+..+++.++|++++++++..+. .+.. .+...+++++|+|||++|+|||||+..
T Consensus 99 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~ 174 (500)
T 1o04_A 99 RTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT-IPID---GDFFSYTRHEPVGVCGQIIPWNFPLLM 174 (500)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEE-ECCS---SSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc-eecC---CCceEEEEEecCCcEEEECCCCchHHH
Confidence 999999999999999998867899999999999999988876542 1211 234568899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.++++++||++||+||+|||+.+|+++.+++++ |.++|+|+|++|+|+|. .+.++.|++ ++|+|+||||+.+|
T Consensus 175 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l----~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G 250 (500)
T 1o04_A 175 QAWKLGPALATGNVVVMKVAEQTPLTALYVANL----IKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 250 (500)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHH----HHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccChHHHHHHHHH----HHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHH
Confidence 999999999999999999999999999887776 45689999999999995 477888988 79999999999999
Q ss_pred HHHHHHHh-ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhccc
Q 009397 282 RMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (535)
Q Consensus 282 ~~v~~~aa-~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (535)
+.|++.++ +++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 251 ~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 330 (500)
T 1o04_A 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRV 330 (500)
T ss_dssp HHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCc
Confidence 99999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceee
Q 009397 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (535)
Q Consensus 361 ~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~ 440 (535)
+|+|.++++++|||+++.++++++++|++++++|+++++||++. ...|+|++|||+.+++++|++++||+||||++
T Consensus 331 ~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 406 (500)
T 1o04_A 331 VGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQ 406 (500)
T ss_dssp BCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred CCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEeCCCCCChhhhCcccceEEE
Confidence 99999999999999999999999999999999999999999742 13689999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccC
Q 009397 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDP 516 (535)
Q Consensus 441 v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~ 516 (535)
|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+||++|.+|+ ++|
T Consensus 407 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl-~~f 485 (500)
T 1o04_A 407 ILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGL-QAY 485 (500)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGG-GGG
T ss_pred EEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHH-HHh
Confidence 99999999999999999999999999999999999999999999999997654444455 8999999999999 589
Q ss_pred ceeeee
Q 009397 517 TKLKML 522 (535)
Q Consensus 517 ~~~k~~ 522 (535)
++.|++
T Consensus 486 ~~~K~v 491 (500)
T 1o04_A 486 TEVKTV 491 (500)
T ss_dssp EEEEEE
T ss_pred cceEEE
Confidence 999998
No 16
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.2e-96 Score=793.76 Aligned_cols=463 Identities=27% Similarity=0.397 Sum_probs=432.8
Q ss_pred CcccccCCcccCCCCCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHh--HHHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~--~~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
.+++||+|+|+.+.++++++++||+| |+++++++.++.+|+++++++|++|| ..|+++|..+|.++|+++++.|+++
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 45789999999988889999999999 99999999999999999999999999 7899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++ .+|+..+++.++|+++.++++.. +..+... .+...+++++|+|||++|+|||||+..
T Consensus 102 ~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~-~~~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~ 177 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEG-QTHNNIG--DDRLGLVLREPVGVVGIITPWNFPFII 177 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCE-EEECCSC--TTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-eeeccCC--CCceeEEEeccceEEEEECCCccHHHH
Confidence 9999999999999999999 69999999999999999887643 2222211 235678999999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.+ +.++.|++ +||+|+||||+.+|
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~----~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 253 (528)
T 3u4j_A 178 ASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELA----REAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVG 253 (528)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHH----HHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHH----HHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHH
Confidence 9999999999999999999999999999887775 45899999999999954 78889988 79999999999999
Q ss_pred HHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 282 ~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
+.|++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 254 ~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 333 (528)
T 3u4j_A 254 TKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAF 333 (528)
T ss_dssp HHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCE
T ss_pred HHHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
|+|.++++++||++++.++++++++|++++++|+++++||.+... ..|+|++|||+.+++++|++++||+||||++|
T Consensus 334 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~---~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 410 (528)
T 3u4j_A 334 GDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGR---EAGLYYAPTVFAGVTPDMSIAREEIFGPVLST 410 (528)
T ss_dssp ECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECT---TTSCEECCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC---CCCcEecceEEecCCCCCccccceeeccEEEE
Confidence 999999999999999999999999999999999999999985321 27999999999999999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+||++|++|| ++|+
T Consensus 411 ~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl-~~ft 489 (528)
T 3u4j_A 411 LTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGF-DEYS 489 (528)
T ss_dssp EEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHH-HHTE
T ss_pred EEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHH-HHhh
Confidence 9999999999999999999999999999999999999999999999998765555556 8999999999999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 490 ~~K~v 494 (528)
T 3u4j_A 490 QFKGV 494 (528)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 99997
No 17
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.5e-95 Score=783.18 Aligned_cols=462 Identities=27% Similarity=0.466 Sum_probs=430.3
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34589999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..++. .|+..+++.++|++....+..... .+.. ..+...+++++|+|||++|+|||||+...++
T Consensus 89 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 164 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDT-IPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITR 164 (481)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEE-ECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccc--CCCceEEEEEcCccEEEEECCCcchHHHHHH
Confidence 99999999999999994 899999999999998876643221 1111 1245678899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v 284 (535)
++++||++||+||+|||+.+|+++.++.++ |.++|+|+|++|+|+|.+ +.++.|++ ++++|.||||+.+|+.|
T Consensus 165 ~~~~ALaaGN~VVlKps~~tp~~~~~l~~l----~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i 240 (481)
T 3jz4_A 165 KAGPALAAGCTMVLKPASQTPFSALALAEL----AIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQL 240 (481)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHH----HHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHH----HHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999887776 556899999999999964 77888988 89999999999999999
Q ss_pred HHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCC
Q 009397 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (535)
Q Consensus 285 ~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (535)
++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 241 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 320 (481)
T 3jz4_A 241 MEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDG 320 (481)
T ss_dssp HHHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCT
T ss_pred HHHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
.++++++|||+++.++++++++|++++++|+++++||.+. ...|+|++|||+.+++++|++++||+||||++|++|
T Consensus 321 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 396 (481)
T 3jz4_A 321 LDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH----ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRF 396 (481)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred ccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccc----CCCCceeccEEEecCCCCcccccccccCceEEEEEE
Confidence 9999999999999999999999999999999999999853 246899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|| .||+||++|.+|| ++|++.|
T Consensus 397 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~-~~~t~~k 475 (481)
T 3jz4_A 397 KDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGI-EDYLEIK 475 (481)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHH-HTTEEEE
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHH-HHhhcee
Confidence 9999999999999999999999999999999999999999999997665555556 8999999999999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
++
T Consensus 476 ~v 477 (481)
T 3jz4_A 476 YM 477 (481)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 18
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=6.2e-96 Score=784.73 Aligned_cols=451 Identities=26% Similarity=0.416 Sum_probs=418.6
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009397 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130 (535)
Q Consensus 51 ~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~ 130 (535)
+||+|+|+.+ ++ ++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++++++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999875 45 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHH
Q 009397 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 210 (535)
Q Consensus 131 ~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~ 210 (535)
++++|+||+..+++ +|+..+++.++|++++++++.... .+.. +...+++++|+|||++|+|||||+...+++++
T Consensus 79 ~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~-~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 152 (486)
T 3pqa_A 79 ILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEV-IPSD----DRLIFTRREPVGIVGAITPFNFPLNLSAHKIA 152 (486)
T ss_dssp HHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEE-ECCT----TEEEEEEEEECSEEEEEECSSSHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCce-ecCC----CceeEEEEccccEEEEECCCchHHHHHHHHHH
Confidence 99999999999995 799999999999999988864432 2221 34678999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHH
Q 009397 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (535)
Q Consensus 211 ~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~ 287 (535)
+||++||+||+|||+.+|+++.++++++.++|+++|+|+|++|+|+|+. +.++.|++ ++|+|+||||+.+|+.|++.
T Consensus 153 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~ 232 (486)
T 3pqa_A 153 PAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKK 232 (486)
T ss_dssp HHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999976 55888887 89999999999999999998
Q ss_pred HhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCC
Q 009397 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367 (535)
Q Consensus 288 aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 367 (535)
++ +||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 233 aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 310 (486)
T 3pqa_A 233 AG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDE 310 (486)
T ss_dssp CC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred cC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcC
Confidence 87 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCH
Q 009397 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447 (535)
Q Consensus 368 ~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~ 447 (535)
++++|||+++.++++++++|++++++|+++++||. ..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 311 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~-------~~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~- 381 (486)
T 3pqa_A 311 KTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------RDKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE- 381 (486)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC-------EETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-
Confidence 99999999999999999999999999999999997 26899999999 9999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 448 ~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+. ...|| .||+||++|.+|| ++|++.|++
T Consensus 382 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl-~~f~~~k~v 460 (486)
T 3pqa_A 382 EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAM-EEMSNIKTI 460 (486)
T ss_dssp HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHH-HHTEEEEEE
T ss_pred HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHH-HHhhceEEE
Confidence 99999999999999999999999999999999999999999986532 23345 8999999999999 589999997
No 19
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.3e-96 Score=787.60 Aligned_cols=461 Identities=28% Similarity=0.470 Sum_probs=429.3
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH--HHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
.+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|++++++
T Consensus 10 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 89 (495)
T 3b4w_A 10 KLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDL 89 (495)
T ss_dssp SEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 479999999887778999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..++..+|+..+++.++|+++.++++.... .+.. .....+++++|+|||++|+|||||+...++
T Consensus 90 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 165 (495)
T 3b4w_A 90 FTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTE-TRTG---SYGQSIVSREPVGVVGAIVAWNVPLFLAVN 165 (495)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEE-EEEE---TTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccCC---CCceEEEEEccCceEEEECCCcchHHHHHH
Confidence 999999999999999965899999999999999988865532 1111 123568899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM 285 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~ 285 (535)
++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+.+.++.|++ ++|+|+||||+.+|+.|+
T Consensus 166 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 241 (495)
T 3b4w_A 166 KIAPALLAGCTIVLKPAAETPLTANALAEVF----AEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVG 241 (495)
T ss_dssp HHHHHHHTTCEEEEECBTTSCHHHHHHHHHH----HHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHcCCEEEEecCCccHHHHHHHHHHH----HHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999887775 4589999999999995578888988 899999999999999999
Q ss_pred HHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCC
Q 009397 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 286 ~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (535)
+.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 242 ~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 321 (495)
T 3b4w_A 242 RRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPS 321 (495)
T ss_dssp HHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTT
T ss_pred HHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecC
Q 009397 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (535)
Q Consensus 366 ~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 445 (535)
++++++|||+++.++++++++|++++++|+++++||++... ...|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 322 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 399 (495)
T 3b4w_A 322 DPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEG--LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYD 399 (495)
T ss_dssp CTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred cCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCccccc--ccCCceeCCEEecCCCCCChhhhcccccceEEEEecC
Confidence 99999999999999999999999999999999999985321 1368999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeee
Q 009397 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKM 521 (535)
Q Consensus 446 ~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~ 521 (535)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++. .....|| .||+||++|.+|| ++|++.|+
T Consensus 400 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl-~~~~~~k~ 477 (495)
T 3b4w_A 400 TEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGV-EHFTQQKS 477 (495)
T ss_dssp SHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHH-HTTEEEEE
T ss_pred CHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHH-HHhcceeE
Confidence 9999999999999999999999999999999999999999999976 4444555 8999999999999 58999999
Q ss_pred e
Q 009397 522 L 522 (535)
Q Consensus 522 ~ 522 (535)
+
T Consensus 478 v 478 (495)
T 3b4w_A 478 V 478 (495)
T ss_dssp E
T ss_pred E
Confidence 8
No 20
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-95 Score=787.89 Aligned_cols=464 Identities=25% Similarity=0.403 Sum_probs=429.7
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++|+++|
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 106 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADEL 106 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||+..++. .|+..+++.++|++++.+++... ..+.. ..+...+++++|+|||++|+|||||+...+++
T Consensus 107 a~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 182 (515)
T 2d4e_A 107 AVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMED-RTFPV--DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWR 182 (515)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCE-EECCB--TTTEEEEEEEEECCCEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceeEEEEecCCceEEECCCCchhhhhhhh
Confidence 9999999999999996 89999999999999988876542 12211 12345688999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~ 285 (535)
+++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|+.|+
T Consensus 183 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~ 258 (515)
T 2d4e_A 183 IAPALAFGNTVVLKPAEWSPFTATKLAEIL----KEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVM 258 (515)
T ss_dssp HHHHHHTTCCEEEECCTTSCHHHHHHHHHH----HHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhHHHHcCCeeeecCCCCcHHHHHHHHHHH----HHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999887775 56899999999999964 67888887 899999999999999999
Q ss_pred HHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCC
Q 009397 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 286 ~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (535)
+.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 259 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 338 (515)
T 2d4e_A 259 RNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPL 338 (515)
T ss_dssp HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred HHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCC----CCCCCCCceeccEEEEcCCCCCcccccccccceeee
Q 009397 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH----LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (535)
Q Consensus 366 ~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~----~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v 441 (535)
++++++|||+++.++++++++|++++++|+++++||++.. .+....|+|++|||+.+ +++|++++||+||||++|
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v 417 (515)
T 2d4e_A 339 DPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVA 417 (515)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEE
T ss_pred cccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEE
Confidence 9999999999999999999999999999999999998532 01113689999999999 999999999999999999
Q ss_pred eecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 442 ~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+||++|.+|| ++|+
T Consensus 418 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl-~~~~ 496 (515)
T 2d4e_A 418 IPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYAL-DFYT 496 (515)
T ss_dssp EEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHH-HHHE
T ss_pred EeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHH-HHhC
Confidence 9999999999999999999999999999999999999999999999997655444556 8999999999999 5799
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 497 ~~K~v 501 (515)
T 2d4e_A 497 DLKTI 501 (515)
T ss_dssp EEEEE
T ss_pred ceeEE
Confidence 99998
No 21
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=8.8e-96 Score=787.04 Aligned_cols=457 Identities=29% Similarity=0.450 Sum_probs=424.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+.+|..+|.++|+++++.|++|+++|
T Consensus 12 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 91 (505)
T 3prl_A 12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEII 91 (505)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCccc---ccccceeeeecceEEEEEcCCchhhhhh
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM---IHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
++++++|+||+..++. +|+..+++.++|++++.+++.... .+..... .....+++++|+|||++|+|||||+...
T Consensus 92 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 92 GELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGET-LKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEE-EEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-ccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 9999999999999995 799999999999999888765422 1111000 0345688999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
++++++||++||+||+|||+.+|+++.++.++ |.++|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|+
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~l----l~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~ 245 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKMVEA----LADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGE 245 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHHHHH----HHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHH----HHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHH
Confidence 99999999999999999999999999877765 567999999999999964 78888988 899999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
.|++.++ +||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 246 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 246 RISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 9999888 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
+|. +++++||++++.++++++++|++++++|+++++||+ ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~-------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~ 395 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNK-------RQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPII 395 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEE
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCceeCCeEeecCCCCChhhcCCccCcEEEEE
Confidence 999 999999999999999999999999999999999997 368999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcc-ccCCCC----CCCCCCcCcHHHhhccCc
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN-YMCQVF----KCIFDEFDSVHVILNDPT 517 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~-~~~~~~----~SG~G~~~g~~gl~~~~~ 517 (535)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.... ....|| .||+||++|.+|| ++|+
T Consensus 396 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~-~~f~ 474 (505)
T 3prl_A 396 RVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSL-LSMT 474 (505)
T ss_dssp EESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHH-HHTE
T ss_pred EeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHH-HHhh
Confidence 999999999999999999999999999999999999999999999998653 233456 9999999999999 5899
Q ss_pred eeeee
Q 009397 518 KLKML 522 (535)
Q Consensus 518 ~~k~~ 522 (535)
+.|++
T Consensus 475 ~~k~v 479 (505)
T 3prl_A 475 RERVT 479 (505)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 99997
No 22
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.2e-95 Score=784.12 Aligned_cols=463 Identities=25% Similarity=0.387 Sum_probs=427.4
Q ss_pred CCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 45 ~~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
.+....+||+|+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|+++
T Consensus 20 ~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 98 (495)
T 1wnd_A 20 GLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEEN 98 (495)
T ss_dssp --CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHH
Confidence 334456899999998766 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++...|+..+++.++|++++++++... ..+.. ..+...+++++|+|||++|+|||||+..
T Consensus 99 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 175 (495)
T 1wnd_A 99 GQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL-AAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMM 175 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEE-CBEEE--ETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-cccCC--CCCceeEEeeecCCeEEEECCCcchHHH
Confidence 99999999999999999995449999999999999988876432 11211 1233568899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
.++++++||++||+||+|||+.+|+++.++++++. ++ +|+|++|+|+|. .+.++.|++ ++|+|+||||+.+|
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 250 (495)
T 1wnd_A 176 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAK----DI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG 250 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHT----TT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHH----Hh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHH
Confidence 99999999999999999999999999998887754 46 999999999995 477888988 79999999999999
Q ss_pred HHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC
Q 009397 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (535)
Q Consensus 282 ~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (535)
+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 251 ~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 330 (495)
T 1wnd_A 251 EHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKS 330 (495)
T ss_dssp HHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC-CcEeccCC-CCCCCCCCCCceeccEEEEcCCCCCccccccccccee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~G-a~~l~gG~-~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl 439 (535)
|+|.++++++|||+++.++++++++|++++++| +++++||+ +. +.|+|++|||+.+++++|++++||+||||+
T Consensus 331 g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 405 (495)
T 1wnd_A 331 GAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-----GNGYYYAPTLLAGALQDDAIVQKEVFGPVV 405 (495)
T ss_dssp CCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-----SSSCCBCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred CCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-----CCCCeeCCEEEeCCCCCChhhhccccCceE
Confidence 999999999999999999999999999999999 99999997 31 268999999999999999999999999999
Q ss_pred eeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhcc
Q 009397 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILND 515 (535)
Q Consensus 440 ~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~ 515 (535)
+|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......|| .||+||++|.+|| ++
T Consensus 406 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl-~~ 484 (495)
T 1wnd_A 406 SVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGL-ED 484 (495)
T ss_dssp EEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHH-HT
T ss_pred EEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHH-HH
Confidence 999999999999999999999999999999999999999999999999997655445556 8999999999999 58
Q ss_pred Cceeeee
Q 009397 516 PTKLKML 522 (535)
Q Consensus 516 ~~~~k~~ 522 (535)
|++.|++
T Consensus 485 f~~~k~v 491 (495)
T 1wnd_A 485 YTVVRHV 491 (495)
T ss_dssp TEEEEEE
T ss_pred hhCeEEE
Confidence 9999987
No 23
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=1.8e-95 Score=782.03 Aligned_cols=461 Identities=28% Similarity=0.434 Sum_probs=430.0
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|+++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (479)
T 2imp_A 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEI 86 (479)
T ss_dssp CCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998877789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||++.++. +|+..+++.++|++++.+++.++.. +.. ..+...+++++|+|||++|+|||||+...+++
T Consensus 87 a~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 87 SALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEII-QSD--RPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEE-CCS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcc-ccC--CCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 9999999999999995 8999999999999998887665432 111 12345688999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~ 285 (535)
+++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+. +.++.|++ ++++|+||||+.+|+.|+
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 238 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIV----DEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 238 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHH----HHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHH----HHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 999999999999999999999999887775 45899999999999965 57888887 899999999999999999
Q ss_pred HHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCC
Q 009397 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 286 ~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (535)
+.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 239 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 318 (479)
T 2imp_A 239 ATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 318 (479)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 366 A-GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 366 ~-~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
+ +++++|||+++.++++++++|++++++|+++++||++.+ ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 319 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~ 394 (479)
T 2imp_A 319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVE----GKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAF 394 (479)
T ss_dssp TCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCC----SSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEE
T ss_pred ccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccC----CCCceECCEEEeCCCCCCHHHhCccCCceEEEEee
Confidence 9 999999999999999999999999999999999998521 36899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+....|| .||+||++|.+|| ++|++.|
T Consensus 395 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l-~~~~~~k 473 (479)
T 2imp_A 395 DTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGL-HEYLQTQ 473 (479)
T ss_dssp SSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHH-HTTEEEE
T ss_pred CCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHH-HHhcCee
Confidence 9999999999999999999999999999999999999999999997665445556 8999999999999 5899999
Q ss_pred ee
Q 009397 521 ML 522 (535)
Q Consensus 521 ~~ 522 (535)
++
T Consensus 474 ~v 475 (479)
T 2imp_A 474 VV 475 (479)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 24
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.8e-95 Score=783.14 Aligned_cols=467 Identities=27% Similarity=0.428 Sum_probs=433.7
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
..+++||+|+|+.+.++++++++||+||+.+++++.++.+|+++++++|++|+..|+.+|..+|.++|+++++.|++|++
T Consensus 5 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (490)
T 2ve5_A 5 EEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERND 84 (490)
T ss_dssp CCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34678999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
+|++++++|+||+..+++..|+..+++.++++++..++... ...+. ......+++++|+|||++|+|||||+...+
T Consensus 85 ~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~ 160 (490)
T 2ve5_A 85 ELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG-EQIPL---RETSFVYTRREPLGVVAGIGAWNYPVQIAL 160 (490)
T ss_dssp HHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCE-EEEEE---ETTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcC-ccccC---CCCceeeEeeccccEEEEECCCcchHHHHH
Confidence 99999999999999999645999999999999998876532 22221 124567889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
+++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|. .+.++.|+. .+|+|+||||+.+|+.
T Consensus 161 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~----~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~ 236 (490)
T 2ve5_A 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIY----TEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKK 236 (490)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH----HHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHH----HHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHH
Confidence 99999999999999999999999999887775 4589999999999994 478888888 7999999999999999
Q ss_pred HHHHH-hccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 284 IMRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 284 v~~~a-a~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
|++.+ ++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 237 i~~~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 316 (490)
T 2ve5_A 237 VMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLG 316 (490)
T ss_dssp HHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred HHHhchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeee
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~ 442 (535)
+|.++++++||++++.++++++++|++++++|+++++||.+...+....|+|++|||+.+++++|++++||+||||++|+
T Consensus 317 ~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~ 396 (490)
T 2ve5_A 317 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSIL 396 (490)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEE
Confidence 99999999999999999999999999999999999999986432223579999999999999999999999999999999
Q ss_pred ecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCce
Q 009397 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+........|+ .||+|+++|.+|+ ++|++
T Consensus 397 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k~SG~G~~~G~~~~-~~f~~ 475 (490)
T 2ve5_A 397 VYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTL-AHYTR 475 (490)
T ss_dssp EESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHH-HTTEE
T ss_pred EeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCCCCCCCCcchHHHH-HHhhe
Confidence 999999999999999999999999999999999999999999999997655555555 8999999999999 58999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|++
T Consensus 476 ~k~v 479 (490)
T 2ve5_A 476 IKSV 479 (490)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9997
No 25
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=2.9e-95 Score=783.30 Aligned_cols=464 Identities=22% Similarity=0.323 Sum_probs=429.5
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
.+.+||+|+|+. ++++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++|+++
T Consensus 23 ~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 100 (500)
T 2j6l_A 23 ENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQV 100 (500)
T ss_dssp EEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 356789999984 567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..++ .+|+..+++.++|++++.+++.... .+.. .......++++|+|||++|+|||||+...++
T Consensus 101 la~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (500)
T 2j6l_A 101 LGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGPI-LPSE--RSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176 (500)
T ss_dssp HHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCBE-ECCS--STTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcc-cccc--CCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence 9999999999999999 6899999999999998877653321 1111 0122356789999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM 285 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~ 285 (535)
++++||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|+.+.++.|++ ++|+|+||||+.+|+.|+
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~ 256 (500)
T 2j6l_A 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVG 256 (500)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999996578888887 899999999999999999
Q ss_pred HHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCC
Q 009397 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 286 ~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (535)
+.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 257 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 336 (500)
T 2j6l_A 257 LMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPW 336 (500)
T ss_dssp HHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecC
Q 009397 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (535)
Q Consensus 366 ~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 445 (535)
++++++|||+++.++++++++|++++++|+++++||++.+ ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 337 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (500)
T 2j6l_A 337 DPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMD----RPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQ 412 (500)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCS----SSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEEC
T ss_pred cCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccC----CCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeC
Confidence 9999999999999999999999999999999999998531 368999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHH--hhcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCce
Q 009397 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIA--AQIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 446 ~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a--~~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+..... ...|| .||+||++|.+|+ ++|++
T Consensus 413 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~-~~f~~ 491 (500)
T 2j6l_A 413 NEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAW-KQYMR 491 (500)
T ss_dssp CHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGG-GGGEE
T ss_pred CHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHH-HHhhc
Confidence 99999999999999999999999999999999 77999999999865322 22334 8999999999999 58999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|++
T Consensus 492 ~k~v 495 (500)
T 2j6l_A 492 RSTC 495 (500)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9987
No 26
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.1e-95 Score=782.85 Aligned_cols=461 Identities=27% Similarity=0.373 Sum_probs=419.7
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 009397 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (535)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~ 125 (535)
++.+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|+
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHR 89 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhH
Confidence 34567999999999888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhh
Q 009397 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (535)
Q Consensus 126 ~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~ 205 (535)
++|++++++|+||+..++. .|+..+++.+++++++.++... ..+.. ...+...+++++|+|||++|+|||||+...
T Consensus 90 ~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 165 (508)
T 3r64_A 90 EEIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLS 165 (508)
T ss_dssp HHHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 9999999999999999995 6999999999999988765433 11111 012356789999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHH-HHHHHHHHHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHH
Q 009397 206 FNPMLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 206 ~~~i~~AL~aGN~VV~kps~~~~~s~-~~~~~~i~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
++++++||++||+||+|||+.+|+++ .++.++ |.++|+|+|++|+|+|+ .+.++.|++ ++|+|.||||+.+|
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~l----l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g 241 (508)
T 3r64_A 166 IRSVAPALAVGNAVVIKPASDTPVTGGVIPARI----FEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVG 241 (508)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHH----HHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHH
T ss_pred HHHHHHHHhcCCEEEEECCCCChHHHHHHHHHH----HHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHH
Confidence 99999999999999999999999999 776665 67799999999999997 578899988 89999999999999
Q ss_pred HHHHHHHhc--cCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcc
Q 009397 282 RMIMRNASK--TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359 (535)
Q Consensus 282 ~~v~~~aa~--~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l 359 (535)
+.|++.+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 242 ~~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 321 (508)
T 3r64_A 242 RRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNI 321 (508)
T ss_dssp HHHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhc
Confidence 999999998 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCccccccccccee
Q 009397 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439 (535)
Q Consensus 360 ~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl 439 (535)
++|+|.++++++|||+++.++++++++|++++++|+++++||.+ .|+|++|||+.+++++|++++||+||||+
T Consensus 322 ~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl 394 (508)
T 3r64_A 322 PTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI-------EGRLVHPHVFSDVTSDMEIAREEIFGPLI 394 (508)
T ss_dssp CBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE-------ETTEECCEEEEEECTTSGGGTSCCCSSEE
T ss_pred cCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC-------CCcEEecEEEecCCCCChhhcccccCceE
Confidence 99999999999999999999999999999999999999999972 68999999999999999999999999999
Q ss_pred eeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcc-ccCCCC----CCCCCCcCcHHHhhc
Q 009397 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN-YMCQVF----KCIFDEFDSVHVILN 514 (535)
Q Consensus 440 ~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~-~~~~~~----~SG~G~~~g~~gl~~ 514 (535)
+|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+ ....|| .||+||++|.+|| +
T Consensus 395 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l-~ 473 (508)
T 3r64_A 395 SVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAI-E 473 (508)
T ss_dssp EEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHH-H
T ss_pred EEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHH-H
Confidence 999999999999999999999999999999999999999999999999998644 233345 8999999999999 5
Q ss_pred cCceeeee
Q 009397 515 DPTKLKML 522 (535)
Q Consensus 515 ~~~~~k~~ 522 (535)
+|++.|++
T Consensus 474 ~ft~~k~v 481 (508)
T 3r64_A 474 EFTTDRWI 481 (508)
T ss_dssp HTEEEEEE
T ss_pred HhhceEEE
Confidence 89999997
No 27
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=3.1e-95 Score=778.95 Aligned_cols=443 Identities=24% Similarity=0.384 Sum_probs=418.0
Q ss_pred eEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh
Q 009397 65 KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS 144 (535)
Q Consensus 65 ~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~ 144 (535)
+++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++++++|++++++|+||+..++.
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred hhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecC
Q 009397 145 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224 (535)
Q Consensus 145 ~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps 224 (535)
+|+..+++.++|++++++++..+..... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 85 -~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps 159 (484)
T 3ros_A 85 -EEVELCVSICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHA 159 (484)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECC
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 8999999999999999988877644332 23567899999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCC
Q 009397 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301 (535)
Q Consensus 225 ~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgG 301 (535)
+.+|+++.++.+++ .++|+|+|++|+|+|++ +.++ |++ ++|+|+||||+.+|+.|++.+++++||+++||||
T Consensus 160 ~~tp~t~~~l~~l~----~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGG 234 (484)
T 3ros_A 160 HNVPGSAALTAKII----KRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGG 234 (484)
T ss_dssp TTCHHHHHHHHHHH----HHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCChHHHHHHHHHH----HHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCC
Confidence 99999998877765 55899999999999976 4566 877 8999999999999999999999999999999999
Q ss_pred cceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHH
Q 009397 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381 (535)
Q Consensus 302 k~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~ 381 (535)
|||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++
T Consensus 235 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~ 314 (484)
T 3ros_A 235 NDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKE 314 (484)
T ss_dssp CCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred CCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCc
Q 009397 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461 (535)
Q Consensus 382 ~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL 461 (535)
+++++|++++++|+++++||.+.+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 315 rv~~~i~~a~~~Ga~v~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL 390 (484)
T 3ros_A 315 KLEAQVKEAIDAGAKVFYQYPEID----SKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGL 390 (484)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCC----CSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCS
T ss_pred HHHHHHHHHHHcCCeEEecCCcCC----CCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCc
Confidence 999999999999999999998532 5799999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 462 ~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
+++|||+|.++++++++++++|+|+||++.......|| .||+||++|++|| ++|++.|++
T Consensus 391 ~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl-~~ft~~K~v 454 (484)
T 3ros_A 391 GSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGL-MAFVNEHLV 454 (484)
T ss_dssp CEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHH-TTTCEEEEE
T ss_pred EEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHH-HHhheeEEE
Confidence 99999999999999999999999999997655555556 8999999999999 689999997
No 28
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.5e-94 Score=782.47 Aligned_cols=459 Identities=21% Similarity=0.360 Sum_probs=426.2
Q ss_pred CcccccCCcccCCCCCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
.+++||+|+|+. ++++++++||+| |+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|+++++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKH 114 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 456899999987 678999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
+|++++++|+||+..++. .|+..+++.++|++++..+.+.++..+.. .+...+++++|+|||++|+|||||+...+
T Consensus 115 ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 190 (538)
T 3qan_A 115 EFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSR---PGEQNRYFYTPMGVTVTISPWNFALAIMV 190 (538)
T ss_dssp HHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCCC---TTEEEEEEEEECCEEEEECCSTTTTHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeeccc---CCcceeeecCCCcEEEEECCCchHHHHHH
Confidence 999999999999999995 69999999999999985554554443322 24567899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
+++++||++||+||+|||+.+|+++.++.++ +.++|+|+|++|+|+|++ +.++.|++ ++++|+||||+.+|+.
T Consensus 191 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l----~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~ 266 (538)
T 3qan_A 191 GTAVAPIVTGNTVVLKPASTTPVVAAKFVEV----LEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVR 266 (538)
T ss_dssp HHHHHHHHTTCEEEEECCTTSHHHHHHHHHH----HHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHH----HHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 9999999999999999999999999877776 556899999999999955 68889987 8999999999999999
Q ss_pred HHHHHhcc------CCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHh
Q 009397 284 IMRNASKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357 (535)
Q Consensus 284 v~~~aa~~------~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~ 357 (535)
|++.++++ +||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 267 i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 346 (538)
T 3qan_A 267 LYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAK 346 (538)
T ss_dssp HHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHT
T ss_pred HHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHH
Confidence 99999998 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccc
Q 009397 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (535)
Q Consensus 358 ~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgP 437 (535)
++++|+|.++++++||++++.++++++++|++++++| ++++||.+.. ..|+|++|||+.+++++|++++||+|||
T Consensus 347 ~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGP 421 (538)
T 3qan_A 347 NLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDS----STGFFIQPTIIADLDPEAVIMQEEIFGP 421 (538)
T ss_dssp TCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEEC----SSSCEECCEEEESCCTTSHHHHSCCCSS
T ss_pred hccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCC----CCCceeCCeeeecCCCCChhhCCCcCCc
Confidence 9999999999999999999999999999999999999 9999998521 2699999999999999999999999999
Q ss_pred eeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECC-CCcc-ccCCCC----CCCCC-CcCcHH
Q 009397 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASN-YMCQVF----KCIFD-EFDSVH 510 (535)
Q Consensus 438 vl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~-~~~~-~~~~~~----~SG~G-~~~g~~ 510 (535)
|++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+ .... ....|| .||+| |++|.+
T Consensus 422 Vl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~ 501 (538)
T 3qan_A 422 VVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPD 501 (538)
T ss_dssp EEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTT
T ss_pred EEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHH
Confidence 9999999999999999999999999999999999999999999999999995 4332 334455 99999 999999
Q ss_pred HhhccCceeeee
Q 009397 511 VILNDPTKLKML 522 (535)
Q Consensus 511 gl~~~~~~~k~~ 522 (535)
|| ++|++.|++
T Consensus 502 gl-~~ft~~k~v 512 (538)
T 3qan_A 502 YL-ALHMQAKTV 512 (538)
T ss_dssp TG-GGGEEEEEE
T ss_pred HH-HHhhCeEEE
Confidence 99 589999997
No 29
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=1.1e-94 Score=776.44 Aligned_cols=458 Identities=27% Similarity=0.445 Sum_probs=425.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
.++||+|+|+.+. ++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++|+++|
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 90 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL 90 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999998764 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||+..++. .|+..+++.++|++++.++... +..+.. ..+...+++++|+|||++|+|||||+...+++
T Consensus 91 a~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g-~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (487)
T 2w8n_A 91 ARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYG-DIIHTP--AKDRRALVLKQPIGVAAVITPWNFPSAMITRK 166 (487)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCC-EEECCS--CTTCEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-cccccC--CCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 9999999999999995 7999999999999998877432 222221 12345688999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEe---CC-ccchhhhhc--cccEEEEeCChHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT---GF-AETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~---~~-~~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
+++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+ |. .+.++.|++ ++|+|+||||+.+|+
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~ 242 (487)
T 2w8n_A 167 VGAALAAGCTVVVKPAEDTPFSALALAELA----SQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGK 242 (487)
T ss_dssp HHHHHHHTCEEEEECCTTCCHHHHHHHHHH----HHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHH
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHH----HHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 999999999999999999999998877764 56899999999999 74 367888888 799999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhc-ccC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSA 361 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~-l~~ 361 (535)
.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++
T Consensus 243 ~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~ 322 (487)
T 2w8n_A 243 ILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRV 322 (487)
T ss_dssp HHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCc-eeccEEEEcCCCCCcccccccccceee
Q 009397 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ-YFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (535)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~-~~~Ptvl~~v~~~~~i~~~E~fgPvl~ 440 (535)
|+|.++++++|||+++.++++++++|++++++|+++++||+.. +.|+ |++|||+.+++++|++++||+||||++
T Consensus 323 G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-----~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~ 397 (487)
T 2w8n_A 323 GNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-----QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAP 397 (487)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-----TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEE
T ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-----CCCCceECCEEEecCCCcchhhhcccccceEE
Confidence 9999999999999999999999999999999999999999742 2588 999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccC
Q 009397 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDP 516 (535)
Q Consensus 441 v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~ 516 (535)
|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+....|| .||+|+++|.+|| ++|
T Consensus 398 v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l-~~f 476 (487)
T 2w8n_A 398 VIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGI-DEY 476 (487)
T ss_dssp EEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGG-GGG
T ss_pred EEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHH-HHh
Confidence 99999999999999999999999999999999999999999999999998765555556 8999999999999 589
Q ss_pred ceeeee
Q 009397 517 TKLKML 522 (535)
Q Consensus 517 ~~~k~~ 522 (535)
++.|++
T Consensus 477 ~~~k~v 482 (487)
T 2w8n_A 477 LELKYV 482 (487)
T ss_dssp EEEEEE
T ss_pred cCccEE
Confidence 999987
No 30
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.7e-94 Score=773.65 Aligned_cols=462 Identities=27% Similarity=0.396 Sum_probs=424.8
Q ss_pred CCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh
Q 009397 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140 (535)
Q Consensus 61 ~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~ 140 (535)
.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|++++++|+||+.
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 82 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS 82 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred hhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEE
Q 009397 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 220 (535)
Q Consensus 141 ~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV 220 (535)
.+ ..|+...++.+++++....+++......... .+.....+++|+|||++|+|||||+...++++++||++||+||
T Consensus 83 ~~--~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 83 IT--VLEIDSFLASIDRWCGLAPELLQTSAKNTSI--PFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHHHCCEEEECSS--TTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred HH--HHHHHHHHHHHHHHHhhhhhcccccccCCCC--CCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 44 3799999999999998888877655443321 2345567889999999999999999999999999999999999
Q ss_pred EecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhccccEEEEeCChHHHHHHHHHHhccCCceeeccC
Q 009397 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300 (535)
Q Consensus 221 ~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elg 300 (535)
+|||+.+|+++..+.++ +.++|+|+|++++++|..+.+..|+.++++|.||||+.+|+.|++.+++++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~----~~~ag~p~gv~~~v~g~~~~~~~l~~~v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMA----LNTVPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHH----HTTCTTTTTTEEECCCCHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred ecccccCchHHHHHHhh----hhhhcccccceeeccccchhhhhhhhccceEEeccccchhhhhhhhhhcccccccccCC
Confidence 99999999998876655 56799999999999998888999988999999999999999999999999999999999
Q ss_pred CcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHH
Q 009397 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 380 (535)
Q Consensus 301 Gk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~ 380 (535)
||||+||++|||++.+++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCC
Q 009397 381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460 (535)
Q Consensus 381 ~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 460 (535)
+++++++++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~---~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 391 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEE---LGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYG 391 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEE---ETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHhhCceeccCCcccc---cCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCC
Confidence 9999999999999999999998532 3578999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecCCHHHHHHHHhhcCcceEEECCCCccccC--CCC----CCCCC-CcCcHHHhhccCceeeee--cCCCCCCCc
Q 009397 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC--QVF----KCIFD-EFDSVHVILNDPTKLKML--PHFSVPAIW 531 (535)
Q Consensus 461 L~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~--~~~----~SG~G-~~~g~~gl~~~~~~~k~~--~~~~~~~~~ 531 (535)
|+++|||+|.++++++++++++|+|+||++...... .|+ .||+| +++|.+|+ ++|++.|++ ..-..+.+|
T Consensus 392 L~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~-~~f~~~k~v~~~~~~~~~p~ 470 (474)
T 4h7n_A 392 LSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGL-KRFLRKQAFLIKTNSTSDPW 470 (474)
T ss_dssp SEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHH-HTTEEEEEEEEECSSSCCTT
T ss_pred CeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHH-HHhCeEEEEEECCCCCCCCC
Confidence 999999999999999999999999999998655432 234 79998 88999999 589999997 333335678
Q ss_pred ccc
Q 009397 532 WCQ 534 (535)
Q Consensus 532 ~~~ 534 (535)
||.
T Consensus 471 w~d 473 (474)
T 4h7n_A 471 WFD 473 (474)
T ss_dssp SCC
T ss_pred CcC
Confidence 884
No 31
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=2.5e-94 Score=773.50 Aligned_cols=462 Identities=24% Similarity=0.388 Sum_probs=414.9
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
.+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|+++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 86 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDD 86 (478)
T ss_dssp CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45789999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..++...|+..+++.++++++..+++.... .....+++++|+|||++|+|||||+...++
T Consensus 87 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 158 (478)
T 3ty7_A 87 IVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSL 158 (478)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHH
Confidence 999999999999999966899999999999999887765432 123567899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v 284 (535)
++++||++||+||+|||+.+|+++.++.+++ .++|+|+|++|+|+|++ +.++.|+. ++|+|+||||+.+|+.|
T Consensus 159 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i 234 (478)
T 3ty7_A 159 KLAAAFAAGSPVVLKPSEETPFAAVILAEIF----DKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKI 234 (478)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHH----HHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC-
T ss_pred HHHHHHHcCCeEEEECCCcchHHHHHHHHHH----HHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHH
Confidence 9999999999999999999999998877775 55899999999999955 78888887 89999999999999999
Q ss_pred HHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCC
Q 009397 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (535)
Q Consensus 285 ~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (535)
++.++++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus 235 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 314 (478)
T 3ty7_A 235 MEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNP 314 (478)
T ss_dssp -CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
.++++++|||+++.++++++++|++++++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|++|
T Consensus 315 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~-~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~ 393 (478)
T 3ty7_A 315 REDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP-EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITY 393 (478)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCc-cccCCCceeCCEEEecCCCCCcccCceeECceeEEEec
Confidence 99999999999999999999999999999999999995321 12357999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLK 520 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k 520 (535)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+ .......|| .||+|+++|.+|| ++|++.|
T Consensus 394 ~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l-~~~t~~k 471 (478)
T 3ty7_A 394 NDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGI-EEFLEVK 471 (478)
T ss_dssp SSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CC-GGGEEEE
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHH-HHhcCeE
Confidence 999999999999999999999999999999999999999999999 333333345 8999999999999 5899999
Q ss_pred eecC
Q 009397 521 MLPH 524 (535)
Q Consensus 521 ~~~~ 524 (535)
++-.
T Consensus 472 ~v~~ 475 (478)
T 3ty7_A 472 SIAG 475 (478)
T ss_dssp EEET
T ss_pred EEEE
Confidence 9853
No 32
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=4.2e-94 Score=773.88 Aligned_cols=457 Identities=23% Similarity=0.343 Sum_probs=423.5
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhH-HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~-~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
.+.+||+|+|+.+. ++++++||+||+++++++.++.+|+++++++|++||. .|+++|..+|.++|+++++.|++|++
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 95 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLD 95 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45689999999764 7899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccc--cccceeeeecceEEEEEcCCchhhhh
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI--HKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+|++++++|+||+..++. .|+..+++.++|++++.+++.. +..+...... ....+++++|+|||++|+|||||+..
T Consensus 96 ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 96 VFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 999999999999999996 8999999999999998887643 2222211011 23568899999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR 282 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~ 282 (535)
.++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|..+.++.|++ ++|+|+||||+.+|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~ 249 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKAL----LDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGE 249 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH----HHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHH----HHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHH
Confidence 9999999999999999999999999999887775 5589999999999997677888888 899999999999999
Q ss_pred HHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCC
Q 009397 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (535)
Q Consensus 283 ~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (535)
.|++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 250 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 327 (501)
T 1uxt_A 250 RVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVG 327 (501)
T ss_dssp HHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCC
Confidence 9999888 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCC-ceeccEEEEcCC---CCCcccccccccce
Q 009397 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD-QYFPPTVIVNVN---HTMKLMQEEAFGPI 438 (535)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g-~~~~Ptvl~~v~---~~~~i~~~E~fgPv 438 (535)
+|.++++++|||+++.++++++++|++++++|+++++||+. .| +|++|||+.+++ ++|++++||+||||
T Consensus 328 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~-------~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPV 400 (501)
T 1uxt_A 328 DPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR-------LGPTYVQPTFVEAPADRVKDMVLYKREVFAPV 400 (501)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB-------CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSE
T ss_pred CccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCCceECCEEEeCCCCCCCcCHHHhCcccCce
Confidence 99999999999999999999999999999999999999973 57 899999999999 99999999999999
Q ss_pred eeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCC-CccccCCCC----CCCCCCcCcHHHhh
Q 009397 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF-ASNYMCQVF----KCIFDEFDSVHVIL 513 (535)
Q Consensus 439 l~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~-~~~~~~~~~----~SG~G~~~g~~gl~ 513 (535)
++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++ .......|| .||+||++|.+||
T Consensus 401 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l- 479 (501)
T 1uxt_A 401 ALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAV- 479 (501)
T ss_dssp EEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTH-
T ss_pred EEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHH-
Confidence 9999999999999999999999999999999999999999999999999997 444444556 9999999999999
Q ss_pred ccCceeeee
Q 009397 514 NDPTKLKML 522 (535)
Q Consensus 514 ~~~~~~k~~ 522 (535)
++|++.|++
T Consensus 480 ~~f~~~k~v 488 (501)
T 1uxt_A 480 EAVTAYKTI 488 (501)
T ss_dssp HHHEEEEEE
T ss_pred HHhCceeEE
Confidence 579999998
No 33
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=4.5e-94 Score=772.87 Aligned_cols=460 Identities=26% Similarity=0.390 Sum_probs=412.7
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
.+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++|+++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (485)
T 4dng_A 6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDD 85 (485)
T ss_dssp CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHH
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~ 207 (535)
|++++++|+||+..++. .|+..+++.++++++..++.. ....+.. ...+...+++++|+|||++|+|||||+...++
T Consensus 86 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~-~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 162 (485)
T 4dng_A 86 IIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELG-GVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMR 162 (485)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCS-CEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhC-Ceecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHH
Confidence 99999999999999996 699999999999999887543 2222211 01235678999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHH-HHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 208 PMLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 208 ~i~~AL~aGN~VV~kps~~~~~s~-~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
++++||++||+||+|||+.+|+++ .++.++ |.++|+|+|++|+|+|++ +.++.|++ ++++|.||||+.+|+.
T Consensus 163 ~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~----l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~ 238 (485)
T 4dng_A 163 SIAPAIALGNSVVHKPDIQTAISGGTIIAKA----FEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRH 238 (485)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHTHHHHHH----HHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHH----HHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHH
Confidence 999999999999999999999999 766555 667999999999999976 58889988 8999999999999999
Q ss_pred HHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCC
Q 009397 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (535)
Q Consensus 284 v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (535)
|++.+++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 239 i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 318 (485)
T 4dng_A 239 IGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGD 318 (485)
T ss_dssp HHHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeee
Q 009397 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (535)
Q Consensus 364 ~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~ 443 (535)
|.++++++||++++.++++++++|++++++|+++++||.+ .|+|++|||+.+++++|++++||+||||++|++
T Consensus 319 ~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~ 391 (485)
T 4dng_A 319 QTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR-------VGNVLTPYVFVGADNNSKIAQTELFAPIATIIK 391 (485)
T ss_dssp TTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEE
T ss_pred CCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------CCcEECCEEEecCCCCChhhcCccccceEEEEE
Confidence 9999999999999999999999999999999999999972 689999999999999999999999999999999
Q ss_pred cCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcc-ccCCCC----CCCCCCcCcHHHhhccCce
Q 009397 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN-YMCQVF----KCIFDEFDSVHVILNDPTK 518 (535)
Q Consensus 444 ~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~-~~~~~~----~SG~G~~~g~~gl~~~~~~ 518 (535)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..+ ....|+ .||+||++|.+|+ ++|++
T Consensus 392 ~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l-~~~t~ 470 (485)
T 4dng_A 392 AGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVV-EEFTV 470 (485)
T ss_dssp ESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHH-HHHEE
T ss_pred eCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHH-HHhhc
Confidence 99999999999999999999999999999999999999999999998644 233345 8999999999999 58999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|++
T Consensus 471 ~k~v 474 (485)
T 4dng_A 471 TKWI 474 (485)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9987
No 34
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=1.6e-93 Score=766.22 Aligned_cols=453 Identities=31% Similarity=0.448 Sum_probs=420.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
+.+||+|+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||..|+.+|..+|.++|+++++.|++|+++|
T Consensus 5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 82 (475)
T 1euh_A 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKI 82 (475)
T ss_dssp CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46799999997654 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCccccc----ccc-eeeeecceEEEEEcCCchhhh
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH----KKA-KVEFHPLGVVGAIVSWNYPFH 203 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~----~~~-~~~~~PlGVv~~i~p~n~P~~ 203 (535)
++++++|+||+..++ ..|+..+++.++|++++.+++.... .+.. ..+ ... +++++|+|||++|+|||||+.
T Consensus 83 a~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 158 (475)
T 1euh_A 83 GAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVN 158 (475)
T ss_dssp HHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEEECCCCchHH
Confidence 999999999999998 4899999999999999887765432 1111 112 345 889999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHH
Q 009397 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV 280 (535)
Q Consensus 204 ~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~ 280 (535)
..++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|.. +.++.|++ ++|+|+||||+.+
T Consensus 159 ~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~ 234 (475)
T 1euh_A 159 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAF----AEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGI 234 (475)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHH----HHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHH----HHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHH
Confidence 99999999999999999999999999999888775 46899999999999975 57888888 7999999999999
Q ss_pred HHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhccc
Q 009397 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (535)
Q Consensus 281 g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (535)
|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 235 g~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 312 (475)
T 1euh_A 235 GERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALT 312 (475)
T ss_dssp HHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhcc
Confidence 999999887 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceee
Q 009397 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (535)
Q Consensus 361 ~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~ 440 (535)
+|+|.+ ++++|||+++.++++++++|++++++|+++++||+. .|+|++|||+.+++++|++++||+||||++
T Consensus 313 ~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~-------~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~ 384 (475)
T 1euh_A 313 IGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDKVTTDMRLAWEEPFGPVLP 384 (475)
T ss_dssp BSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEE
T ss_pred CCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCceeCCEEEeCCCCcCHHHcCccccceEE
Confidence 999999 999999999999999999999999999999999973 589999999999999999999999999999
Q ss_pred eeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECC-CCccccCCCC----CCCCCCcCcHHHhhcc
Q 009397 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQVF----KCIFDEFDSVHVILND 515 (535)
Q Consensus 441 v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~-~~~~~~~~~~----~SG~G~~~g~~gl~~~ 515 (535)
|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+ +.......|| .||+||++|.+|| ++
T Consensus 385 v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~-~~ 463 (475)
T 1euh_A 385 IIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSI-EA 463 (475)
T ss_dssp EEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHH-HH
T ss_pred EEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHH-HH
Confidence 9999999999999999999999999999999999999999999999999 6544344455 8999999999999 57
Q ss_pred Cceeeee
Q 009397 516 PTKLKML 522 (535)
Q Consensus 516 ~~~~k~~ 522 (535)
|++.|++
T Consensus 464 ~~~~k~v 470 (475)
T 1euh_A 464 MTTVKSV 470 (475)
T ss_dssp TEEEEEE
T ss_pred hCCeeEE
Confidence 9999987
No 35
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.3e-93 Score=768.52 Aligned_cols=461 Identities=21% Similarity=0.326 Sum_probs=424.3
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~l 128 (535)
+.+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++|+++|
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 85 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL 85 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHH
Q 009397 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (535)
Q Consensus 129 a~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~ 208 (535)
++++++|+||+..++. +|+..+++.++|++...+.. ..+..+.. ..+...+++++|+|||++|+|||||+...+++
T Consensus 86 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~-~g~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 86 AHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLM-MGDSLASI--ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHH-CEEEEEEE--ETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHh-cCcccccC--CCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 9999999999999984 89999999999987654443 22221110 12345678999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHH
Q 009397 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (535)
Q Consensus 209 i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~ 286 (535)
+++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+.+.++.|++ ++++|+||||+.+|+.|++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~ 237 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELF----EKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYK 237 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHH----HHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHH----HHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 999999999999999999999999887775 5699999999999997778888888 7999999999999999999
Q ss_pred HHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccE-EEEecccHHHHHHHHHHHHhcccCCCCC
Q 009397 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER-FYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (535)
Q Consensus 287 ~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~r-v~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (535)
.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ ||+|+++|+++++++++|+|.
T Consensus 238 ~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~ 316 (486)
T 1t90_A 238 KGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGL 316 (486)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTT
T ss_pred HHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCC
Confidence 999999999999999999999999999999999999999999999999999 999999 999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecC
Q 009397 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (535)
Q Consensus 366 ~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 445 (535)
++++++||++++.++++++++|++++++|+++++||.+. ....|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~---~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~ 393 (486)
T 1t90_A 317 DDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGREN---VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVK 393 (486)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSS---CCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccC---CCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeC
Confidence 999999999999999999999999999999999999753 12468999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCcc-ccCCCC----CCCCC--CcCcHHHhhccCce
Q 009397 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN-YMCQVF----KCIFD--EFDSVHVILNDPTK 518 (535)
Q Consensus 446 ~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~-~~~~~~----~SG~G--~~~g~~gl~~~~~~ 518 (535)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.... ....|| .||+| |++|.+|+ ++|++
T Consensus 394 ~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~-~~~~~ 472 (486)
T 1t90_A 394 NLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSV-DFYTR 472 (486)
T ss_dssp SHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHH-HHTEE
T ss_pred CHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHH-HHhhc
Confidence 999999999999999999999999999999999999999999986432 233456 99999 99999999 57999
Q ss_pred eeee
Q 009397 519 LKML 522 (535)
Q Consensus 519 ~k~~ 522 (535)
.|++
T Consensus 473 ~k~v 476 (486)
T 1t90_A 473 KKVV 476 (486)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9998
No 36
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=6.6e-93 Score=767.79 Aligned_cols=459 Identities=23% Similarity=0.346 Sum_probs=422.5
Q ss_pred CcccccCCcccCCCCCCeEEeecCC-CCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~-tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
.+.+||+|+|+.+ +++++++||+ ||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++|++
T Consensus 37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (516)
T 1uzb_A 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKR 114 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3467999999864 5789999999 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
+|++++++|+||+..++. +|+..+++.++|++++.+++..+...... ..+...+++++|+|||++|+|||||+...+
T Consensus 115 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 191 (516)
T 1uzb_A 115 ELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccC--CCCceEEEEEeccceEEEECCCccHHHHHH
Confidence 999999999999999995 89999999999999998887664321111 123456889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
+++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|.+ +.++.|++ ++++|+||||+.+|+.
T Consensus 192 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~----~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~ 267 (516)
T 1uzb_A 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIF----HEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHH----HHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHH----HHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHH
Confidence 99999999999999999999999998877765 56899999999999954 67888988 7999999999999999
Q ss_pred HHHHHh------ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHh
Q 009397 284 IMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357 (535)
Q Consensus 284 v~~~aa------~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~ 357 (535)
|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 268 i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 347 (516)
T 1uzb_A 268 IYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAE 347 (516)
T ss_dssp HHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred HHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHH
Confidence 999998 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccc
Q 009397 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (535)
Q Consensus 358 ~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgP 437 (535)
++++|+| ++++++|||+++.++++++++|++++++| ++++||... ...|+|++|||+.+++++|++++||+|||
T Consensus 348 ~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGP 421 (516)
T 1uzb_A 348 RLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGP 421 (516)
T ss_dssp TCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSS
T ss_pred hccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccC----CCCCcEECCEEEECCCCCCHhhhccccCc
Confidence 9999999 99999999999999999999999999999 899999742 13689999999999999999999999999
Q ss_pred eeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc--cCCCC----CCCCC-CcCcHH
Q 009397 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY--MCQVF----KCIFD-EFDSVH 510 (535)
Q Consensus 438 vl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~--~~~~~----~SG~G-~~~g~~ 510 (535)
|++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+..... ...|| .||+| +++|.+
T Consensus 422 Vl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~ 501 (516)
T 1uzb_A 422 VLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALD 501 (516)
T ss_dssp EEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHH
T ss_pred eEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHH
Confidence 999999999999999999999999999999999999999999999999999865432 23345 89999 579999
Q ss_pred HhhccCceeeee
Q 009397 511 VILNDPTKLKML 522 (535)
Q Consensus 511 gl~~~~~~~k~~ 522 (535)
|+ ++|++.|++
T Consensus 502 ~l-~~f~~~k~v 512 (516)
T 1uzb_A 502 YL-RLFLEMKAV 512 (516)
T ss_dssp HH-HTTEEEEEE
T ss_pred HH-HHcCCeeEE
Confidence 99 589999987
No 37
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=9.4e-93 Score=758.64 Aligned_cols=447 Identities=27% Similarity=0.463 Sum_probs=419.5
Q ss_pred CCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh
Q 009397 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141 (535)
Q Consensus 62 ~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ 141 (535)
+...++++||+||+++++++.++.+|+++++++|++|+..|+++|..+|.++|+++++.|++++++|++++++|+||+..
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEE
Q 009397 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 221 (535)
Q Consensus 142 ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~ 221 (535)
+++ .|+..+++.++|+++..+++..+.... ..+...+++++|+|||++|+|||||+...++++++||++||+||+
T Consensus 85 ~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~Vvl 159 (462)
T 3etf_A 85 QAR-AEVTKSAALCDWYAEHGPAMLNPEPTL----VENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLL 159 (462)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHTSCEECS----SGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHH-HHHHHHHHHHHHHHHhHHHhcCCcccC----CCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEE
Confidence 995 799999999999999888776554211 134567889999999999999999999999999999999999999
Q ss_pred ecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeecc
Q 009397 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299 (535)
Q Consensus 222 kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~el 299 (535)
|||+.+|+++.++.++ |.++|+|+|++|+|+|+.+.++.|++ ++++|+||||+.+|+.|++.++++++|+++|+
T Consensus 160 Kps~~tp~~~~~l~~~----l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lEl 235 (462)
T 3etf_A 160 KHAPNVTGCAQMIARI----LAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLEL 235 (462)
T ss_dssp ECCTTCHHHHHHHHHH----HHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ECCCCCcHHHHHHHHH----HHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEc
Confidence 9999999999877665 56699999999999997788888887 89999999999999999999999999999999
Q ss_pred CCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHH
Q 009397 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 379 (535)
Q Consensus 300 gGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~ 379 (535)
|||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||++..+
T Consensus 236 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~ 315 (462)
T 3etf_A 236 GGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDL 315 (462)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHH
T ss_pred CCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCC
Q 009397 380 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459 (535)
Q Consensus 380 ~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 459 (535)
+++++++|++++++|+++++||.+.+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 316 ~~~v~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~ 391 (462)
T 3etf_A 316 RDELHQQVQASVAEGARLLLGGEKIA----GEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEF 391 (462)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSBCS----SSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCcccC----CCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCC
Confidence 99999999999999999999998532 46899999999999999999999999999999999999999999999999
Q ss_pred CcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 460 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 460 gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
||+++|||+|.++++++++++++|+|+||++.......|| .||+|+++|.+|+ ++|++.|++
T Consensus 392 gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~-~~~~~~k~v 457 (462)
T 3etf_A 392 GLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGL-HEFCNVQTV 457 (462)
T ss_dssp CSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHH-HTTEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHH-HHHhceeEE
Confidence 9999999999999999999999999999998655555556 8999999999999 589999987
No 38
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=6.8e-91 Score=755.42 Aligned_cols=473 Identities=20% Similarity=0.247 Sum_probs=427.9
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHh-
Q 009397 47 DNSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH- 124 (535)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~- 124 (535)
..+.+||+|+|+.+. +.+.++||+| |+++++++.++.+|+++||++|++||+.|+++|..+|.++|+++++.|+++
T Consensus 62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~ 139 (563)
T 4e3x_A 62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPR 139 (563)
T ss_dssp EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Confidence 456799999998764 4678899998 899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhh
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~ 204 (535)
+++|++++++|+||+..++...|+..+++.++|+++.++++......... .......+++|+|||++|+|||||+..
T Consensus 140 ~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~r~p~GVV~~I~PwNfP~~~ 216 (563)
T 4e3x_A 140 RAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVP---PSTNHTVYRGLEGFVAAISPFNFTAIG 216 (563)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCT---TEEEEEECCBCSSEEEEECCSSCHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCC---CCcceEEEecCceEEEEECCchHHHHH
Confidence 99999999999999999996444999999999999998887654332221 123455667788999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHH
Q 009397 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (535)
Q Consensus 205 ~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g 281 (535)
..+++++|| +||+||+|||+.+|+++.+++++ |.++|+|+|++|+|+|++ +.++.|++ ++++|.||||+.+|
T Consensus 217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~l----l~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG 291 (563)
T 4e3x_A 217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRI----LREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTF 291 (563)
T ss_dssp HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHH----HHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHH
T ss_pred HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHH----HHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHH
Confidence 999999999 59999999999999999887776 556899999999999976 57888987 89999999999999
Q ss_pred HHHHHHHhccCCc------eeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHH
Q 009397 282 RMIMRNASKTLTP------VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355 (535)
Q Consensus 282 ~~v~~~aa~~~~p------v~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~ 355 (535)
+.|++.++++++| +++|+|||||+||++|||++.|++.+++|+|.++||.|++++|+|||+++||+|+++|+++
T Consensus 292 ~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~ 371 (563)
T 4e3x_A 292 KHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEE 371 (563)
T ss_dssp HHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHH
Confidence 9999999999985 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccCCCC-CCCCCcccccCCHHHHHHHHHHHHHHHH-cCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccc
Q 009397 356 VKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433 (535)
Q Consensus 356 ~~~l~~G~~-~~~~~~~Gpli~~~~~~~l~~~i~~a~~-~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E 433 (535)
++++++|+| .++++++||++++.++++++++|+++++ +|+++++||... ...|+|++|||+.+++++|++++||
T Consensus 372 ~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~----~~~G~fv~PTvl~~v~~~~~i~~eE 447 (563)
T 4e3x_A 372 HSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCN----ESVGYYVEPCIIESKDPQEPIMKEE 447 (563)
T ss_dssp HHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEE----CSSSCEECCEEEEESCTTCGGGTSC
T ss_pred HHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccC----CCCCcEecCEEEecCCCCChhhcCC
Confidence 999999999 9999999999999999999999999996 899999999742 2479999999999999999999999
Q ss_pred cccceeeeeecCC--HHHHHHHh-hcCCCCcEEEEecCCHHHHHHHHhhcC--cceEEECCCCccc--cCCCC----CCC
Q 009397 434 AFGPIMPIMKFNT--DEEVVKLA-NDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNY--MCQVF----KCI 502 (535)
Q Consensus 434 ~fgPvl~v~~~~~--~~eai~~~-n~~~~gL~asvfs~d~~~~~~~a~~l~--~G~v~IN~~~~~~--~~~~~----~SG 502 (535)
+||||++|++|+| +||||+++ |+++|||+++|||+|.+++++++++++ +|+|+||+..+.. ..+|| .||
T Consensus 448 iFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG 527 (563)
T 4e3x_A 448 IFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASG 527 (563)
T ss_dssp CCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTB
T ss_pred CcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccC
Confidence 9999999999997 79999999 789999999999999999999999975 9999999976443 34566 899
Q ss_pred CC-CcCcHHHhhccCceeeeec-CCCCCCCcccc
Q 009397 503 FD-EFDSVHVILNDPTKLKMLP-HFSVPAIWWCQ 534 (535)
Q Consensus 503 ~G-~~~g~~gl~~~~~~~k~~~-~~~~~~~~~~~ 534 (535)
+| +.+|.++| ..|++.|++- .+..+.-|||-
T Consensus 528 ~g~~~~G~~~l-~~~~~~k~v~~~~~~~~~~~yp 560 (563)
T 4e3x_A 528 TNDKPGGPHYI-LRWTSPQVIKETHKPLGDWRYS 560 (563)
T ss_dssp CCCCTTSTTGG-GGGBCCEEEEEECSCCCCSSCT
T ss_pred CCCccCCHHHH-HHhCceEEEEEeCcCCCcccCC
Confidence 98 89999999 5899999993 35556777773
No 39
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=6.4e-90 Score=740.57 Aligned_cols=451 Identities=20% Similarity=0.314 Sum_probs=413.2
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 009397 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (535)
Q Consensus 50 ~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la 129 (535)
++||+|+|+.+. +..++++||+||+++++++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++++++|+
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 85 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA 85 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999864 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHH
Q 009397 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (535)
Q Consensus 130 ~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i 209 (535)
+++++|+||+..++. .|+..+++.++|+++..+++........ ......++++|+|||++|+|||||+...++++
T Consensus 86 ~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (490)
T 3ju8_A 86 RVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPL----ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHI 160 (490)
T ss_dssp HHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEE----TTEEEEEEEEECSEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccC----CCCeeeEEECCCCEEEEECCCcchHHHHHHHH
Confidence 999999999999995 8999999999999988776544322111 12345677999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHH
Q 009397 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (535)
Q Consensus 210 ~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~ 287 (535)
++||++||+||+|||+.+|+++.++.++ |.++|+|+|++|+|+|+.+.++.|+. ++|+|.||||+.+|+.|++.
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l~~l----~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 236 (490)
T 3ju8_A 161 VPALLAGNCVVFKPSELTPKVAELTLKA----WIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQ 236 (490)
T ss_dssp HHHHHHTCEEEEECCTTCHHHHHHHHHH----HHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCeEEEECCCCCcHHHHHHHHH----HHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999877766 55689999999999997788899988 79999999999999999999
Q ss_pred HhccCCce-eeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc-HHHHHHHHHHHHhcccCCC-C
Q 009397 288 ASKTLTPV-TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGP-P 364 (535)
Q Consensus 288 aa~~~~pv-~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v-~d~f~~~L~~~~~~l~~G~-~ 364 (535)
++++++|+ ++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |
T Consensus 237 aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~ 316 (490)
T 3ju8_A 237 FGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFD 316 (490)
T ss_dssp TTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred hhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCC
Confidence 99999998 8999999999999999999999999999999999999999999999996 9999999999999999999 9
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeec
Q 009397 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (535)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~ 444 (535)
.++++++|||+++.++++++++|++++++|+++++||.+.+ ..|+|++|||+. ++++|++++||+||||++|++|
T Consensus 317 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~ 391 (490)
T 3ju8_A 317 EQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPI----DGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRY 391 (490)
T ss_dssp CSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCS----TTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEE
T ss_pred CCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccC----CCCCEEccEEEE-eCCCCccccccccccEEEEEEe
Confidence 99999999999999999999999999999999999998532 479999999999 9999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc-cCCCC----CCCCCCcCcHHHhhccCcee
Q 009397 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY-MCQVF----KCIFDEFDSVHVILNDPTKL 519 (535)
Q Consensus 445 ~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~-~~~~~----~SG~G~~~g~~gl~~~~~~~ 519 (535)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+...+. ...|| .||+ +|+ ++|++.
T Consensus 392 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~------~~~-~~~~~~ 464 (490)
T 3ju8_A 392 SDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGN------HRP-SAYYAA 464 (490)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBS------SCC-EETTHH
T ss_pred CCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccch------hHH-Hhhhee
Confidence 99999999999999999999999999999999999999999999976432 22223 4554 456 578888
Q ss_pred eee
Q 009397 520 KML 522 (535)
Q Consensus 520 k~~ 522 (535)
|++
T Consensus 465 k~v 467 (490)
T 3ju8_A 465 DYC 467 (490)
T ss_dssp HHH
T ss_pred EEE
Confidence 876
No 40
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=7.3e-90 Score=734.48 Aligned_cols=441 Identities=26% Similarity=0.355 Sum_probs=391.6
Q ss_pred CCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhh
Q 009397 63 ETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD 142 (535)
Q Consensus 63 ~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~e 142 (535)
-+..+++||.||+++++++.++.+|+++++++|++||..|+.+|..+|.++|+++++.|++++++|++++++|+||+..+
T Consensus 5 ~~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 84 (457)
T 3lns_A 5 HHHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDV 84 (457)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHH
T ss_pred cccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEe
Q 009397 143 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 222 (535)
Q Consensus 143 a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~k 222 (535)
++.+|+..+++.+++++++.+++..+...+..........+++++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 85 a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlK 164 (457)
T 3lns_A 85 VDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIK 164 (457)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEE
Confidence 96679999999999999999888765443332222345678899999999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCC
Q 009397 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301 (535)
Q Consensus 223 ps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgG 301 (535)
||+.+|+++.++++++.+ + +|+|++|+|+|+.+.++.|++ .+|+|+||||+.+|+.|++.+++++||+++||||
T Consensus 165 ps~~tp~t~~~l~~l~~~----a-lP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGG 239 (457)
T 3lns_A 165 PSETTPETSAVIEKIIAE----A-FAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGG 239 (457)
T ss_dssp CCTTCHHHHHHHHHHHHH----H-CCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CCCCChHHHHHHHHHHHH----h-CCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCC
Confidence 999999999998888765 4 999999999997788889998 9999999999999999999999999999999999
Q ss_pred cceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHH
Q 009397 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381 (535)
Q Consensus 302 k~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~ 381 (535)
|||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++|||+++++++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 5555 999999999999
Q ss_pred HHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhc-CCCC
Q 009397 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND-SRYG 460 (535)
Q Consensus 382 ~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~g 460 (535)
+++++|+++ ++++++||.. .+.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++||
T Consensus 315 rv~~~i~~a---~~~~~~gg~~-----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~g 386 (457)
T 3lns_A 315 RLVSLLEAT---QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKP 386 (457)
T ss_dssp HHHHHHHHC---CSEEEECCCE-----EGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSC
T ss_pred HHHHHHHhc---CCeEEeCCcc-----CCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCC
Confidence 999999985 3599999973 236899999999999999999999999999999999999999999999 9999
Q ss_pred cEEEEecCCHHHHHHHHhhcCcceEEECCCCcc--ccCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASN--YMCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 461 L~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~--~~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|+++|||+|.++++++++++++|+|+||+.... ....|| .||+||++|.+|+ ++|++.|++
T Consensus 387 L~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~-~~f~~~k~v 453 (457)
T 3lns_A 387 LAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSY-LTFTHKKSV 453 (457)
T ss_dssp SEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHH-HHTEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHH-HHhhCeeEE
Confidence 999999999999999999999999999997543 223345 8999999999999 589999987
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=3.4e-89 Score=742.23 Aligned_cols=463 Identities=16% Similarity=0.209 Sum_probs=409.6
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEEcCCCHHHHHHHHHHHHHH-hHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 009397 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (535)
Q Consensus 49 ~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A-~~~W~~~~~~~R~~iL~~la~~l~~~~~~ 127 (535)
+.+||+|+|+.+.+ .+++++||+||+++++++.++ +|+++++++|++| |+.|+++|..+|.++|+++++.|++|+++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46899999997654 589999999999999999988 9999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCC------cccCCCcccccccceeeeecc-eEEEEEcCCch
Q 009397 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP------EYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNY 200 (535)
Q Consensus 128 la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~Pl-GVv~~i~p~n~ 200 (535)
|++++++|+||+..++. .|+..+++.++|++..+++.... +..+... .......+.++|+ |||++|+||||
T Consensus 86 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~P~~GVv~~I~PwN~ 163 (534)
T 2y53_A 86 YYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSK-DRSFSAQHVLSPTRGVALFINAFNF 163 (534)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECST-TSSEEEEEEEEECSSCEEEECCTTC
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCC-CCcccceEEEecCCCEEEEECCCch
Confidence 99999999999999995 69999999999999877554321 1111100 0011346788997 99999999999
Q ss_pred hhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC-CCCCcEEEEeCCc-cchhhhhccccEEEEeCCh
Q 009397 201 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVGSP 278 (535)
Q Consensus 201 P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG-~p~~~v~~v~~~~-~~~~~L~~~v~~v~f~GS~ 278 (535)
|+...++++++||++||+||+|||+.+|+++..+++++ .++| +|+|++|+|+|+. +.++.| ..+|+|+||||+
T Consensus 164 P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~----~~aG~lP~gvv~vv~g~~~~l~~~l-~~vd~V~FTGS~ 238 (534)
T 2y53_A 164 PSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADV----VDAGILPPGALSIICGSSAGLLDQI-RSFDVVSFTGSA 238 (534)
T ss_dssp TTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHH----HHHTCSCTTSEEECCSCCTTSGGGC-CTTCEEEEESCH
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHH----HHhCCCCCCeEEEEeCChHHHHhcc-cccCEEEEECCH
Confidence 99999999999999999999999999999999877775 5689 7999999999965 333333 279999999999
Q ss_pred HHHHHHHHHHh--ccCCceeeccCCcceEEEecCC-----CHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHH
Q 009397 279 GVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 351 (535)
Q Consensus 279 ~~g~~v~~~aa--~~~~pv~~elgGk~p~iV~~da-----Dl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~ 351 (535)
.+|+.|++.++ +++||+++|||||||+||++|| |++.|++.+++|+|.|+||.|++++|||||+++||+|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999998875 8999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCC--CCCCCCceeccEEEEcCCCC--C
Q 009397 352 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL--SEGAVDQYFPPTVIVNVNHT--M 427 (535)
Q Consensus 352 L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~--~~~~~g~~~~Ptvl~~v~~~--~ 427 (535)
|+++++++++|+|.++++++|||+++.++++++++|+++ .+|+++++||++... +....|+|++|||+.+++++ |
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 689999999974321 11236899999999999987 6
Q ss_pred cccccccccceeeeeecC---CH-----HHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc--CcceEEECCCCcc----
Q 009397 428 KLMQEEAFGPIMPIMKFN---TD-----EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFASN---- 493 (535)
Q Consensus 428 ~i~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l--~~G~v~IN~~~~~---- 493 (535)
++++||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.++++++++++ ++|+|+||++..+
T Consensus 398 ~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~ 477 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQT 477 (534)
T ss_dssp STTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCC
T ss_pred HHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCccccccc
Confidence 999999999999999999 99 999999999999999999999999999999999 8999999986421
Q ss_pred -----ccCCCC----CCCCCCc-CcHHHhhccCceeeee
Q 009397 494 -----YMCQVF----KCIFDEF-DSVHVILNDPTKLKML 522 (535)
Q Consensus 494 -----~~~~~~----~SG~G~~-~g~~gl~~~~~~~k~~ 522 (535)
....|+ .||+||+ +|.+|+ ++|++.|++
T Consensus 478 ~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l-~~~~~~k~v 515 (534)
T 2y53_A 478 GHGNVMPMSLHGGPGRAGGGEELGGLRAL-AFYHRRSAI 515 (534)
T ss_dssp CSSCCCTTSEECCSGGGCSCCEESGGGGG-GGGEEEEEE
T ss_pred ccCCCCCCCCCCCcccCCCCCCcchHHHH-HHHhhhhee
Confidence 122233 8999999 799999 589999997
No 42
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=6.7e-89 Score=727.84 Aligned_cols=424 Identities=26% Similarity=0.404 Sum_probs=388.6
Q ss_pred CCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHh
Q 009397 82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161 (535)
Q Consensus 82 ~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~ 161 (535)
..+.+|+++++++|++||..|+.+|..+|.++|+++++.|++++++|++++++|+||+..++...|+..+++.+++++++
T Consensus 14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 93 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQK 93 (469)
T ss_dssp ----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567999999999999999999999999999999999999999999999999999999999778999999999999988
Q ss_pred chhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHH
Q 009397 162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241 (535)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~ 241 (535)
..++..+..............+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~- 172 (469)
T 3sza_A 94 LPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ- 172 (469)
T ss_dssp HHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred HHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH-
Confidence 8777665443322222345678999999999999999999999999999999999999999999999999988888654
Q ss_pred HHhcCCCCCcEEEEeCCccchhhhhc-cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHH
Q 009397 242 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 320 (535)
Q Consensus 242 l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i 320 (535)
+ +|+|++|+|+|+.+.+..|+. .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+
T Consensus 173 ---a-lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 ---Y-LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp ---H-SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred ---h-CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 4 899999999997776777777 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEecc
Q 009397 321 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (535)
Q Consensus 321 ~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~g 400 (535)
++|+|.|+||.|++++|||||+++||+|+++|+++++++ .|+|.++++++|||+++.++++++++| +|+++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999998 599999999999999999999999998 69999999
Q ss_pred CCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhc
Q 009397 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480 (535)
Q Consensus 401 G~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l 480 (535)
|.+ ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++
T Consensus 323 G~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l 397 (469)
T 3sza_A 323 GTG-----DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAET 397 (469)
T ss_dssp CCE-----ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHC
T ss_pred Ccc-----CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhC
Confidence 984 246899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEECCCCccc--cCCCC----CCCCCCcCcHHHhhccCceeeee
Q 009397 481 QCGVAAINDFASNY--MCQVF----KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 481 ~~G~v~IN~~~~~~--~~~~~----~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++|+|+||+..... ...|| .||+||++|.+|+ ++|++.|++
T Consensus 398 ~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~-~~ft~~K~v 444 (469)
T 3sza_A 398 SSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSF-ETFSHRRSC 444 (469)
T ss_dssp CCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHH-HHTEEEEEE
T ss_pred CcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHH-HHhhCeeEE
Confidence 99999999975432 23345 8999999999999 589999997
No 43
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=5.5e-88 Score=770.22 Aligned_cols=459 Identities=20% Similarity=0.329 Sum_probs=425.2
Q ss_pred CcccccCCcccCCCCCCeEEeecCCC-CcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 009397 48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (535)
Q Consensus 48 ~~~~~i~~~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~ 126 (535)
.+.++|+|+|+.+ +++++++||+| |+++++++.++.+|+++|+++|++|+..|+.+|+.+|+++|+++++.|+++++
T Consensus 531 ~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~ 608 (1026)
T 4f9i_A 531 TYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLF 608 (1026)
T ss_dssp EECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999864 67999999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhH
Q 009397 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (535)
Q Consensus 127 ~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~ 206 (535)
+|++++++|+||+..++ ..|+..+++.++|++..++++..+...... .+..+.++++|+|||++|+|||||+...+
T Consensus 609 eLa~~~~~E~GK~~~ea-~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~---~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 609 ELSAWQVLEIGKQWDQA-YADVTEAIDFLEYYAREMIRLGQPQRVGHA---PGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp HHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHTSCEEECCC---TTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHhCCChhhH-HHHHHHHHHHHHHHHHHHHHhcCCccccCC---CCccceeEeecCceEEEeCCCccHHHHHH
Confidence 99999999999999999 489999999999999998887654332211 24567889999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHH
Q 009397 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (535)
Q Consensus 207 ~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~ 283 (535)
+++++||++||+||+|||+.+|+++..++++ |.++|+|+|++|+|+|++ +.++.|++ +|++|+||||+.+|+.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~el----l~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~ 760 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVEL----FREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLR 760 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHH----HHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHH----HHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHH
Confidence 9999999999999999999999999887776 556899999999999976 67889988 8999999999999999
Q ss_pred HHHHHh------ccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHh
Q 009397 284 IMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357 (535)
Q Consensus 284 v~~~aa------~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~ 357 (535)
|++.++ ++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|+++++
T Consensus 761 I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~ 840 (1026)
T 4f9i_A 761 IIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAK 840 (1026)
T ss_dssp HHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHH
Confidence 999988 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccc
Q 009397 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (535)
Q Consensus 358 ~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgP 437 (535)
++++|+|.++++++||+|++.++++++++|++++++| ++++||... ...|+|++|||+.+++++|++++||+|||
T Consensus 841 ~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGP 915 (1026)
T 4f9i_A 841 ATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVP----AGEGYFVPMTIIGGIKPEHRIAQEEIFGP 915 (1026)
T ss_dssp HCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCC----SSSSCCCCCEEEESCCTTSGGGTSCCCSS
T ss_pred hcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcC----CCCCceecceeeecCCCCccccCceecCc
Confidence 9999999999999999999999999999999999999 999999732 12499999999999999999999999999
Q ss_pred eeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccc--cCCCC----CCCCC-CcCcHH
Q 009397 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY--MCQVF----KCIFD-EFDSVH 510 (535)
Q Consensus 438 vl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~--~~~~~----~SG~G-~~~g~~ 510 (535)
|++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+..+.. ..+|| .||+| +.+|++
T Consensus 916 Vl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~ 995 (1026)
T 4f9i_A 916 VLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPD 995 (1026)
T ss_dssp EEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTT
T ss_pred EEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHH
Confidence 999999999999999999999999999999999999999999999999999976543 34566 89999 468999
Q ss_pred HhhccCceeeee
Q 009397 511 VILNDPTKLKML 522 (535)
Q Consensus 511 gl~~~~~~~k~~ 522 (535)
+| ..|++.|++
T Consensus 996 ~l-~~f~~~k~v 1006 (1026)
T 4f9i_A 996 YL-LHFMDPRVV 1006 (1026)
T ss_dssp TG-GGGEEEEEE
T ss_pred HH-HHhceEEEE
Confidence 99 589999998
No 44
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=3e-87 Score=726.05 Aligned_cols=454 Identities=18% Similarity=0.194 Sum_probs=407.9
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEE-EEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHh
Q 009397 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLG-YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (535)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~~~~~~~P~tg~~l~-~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~ 124 (535)
...+++||+|+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||..|+++|..+|.++|+++++.|++|
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEAR 101 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Confidence 34567899999987643 89999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHhchh--hcCCccc---CCCcccccccceeeeecceEEEEEcCCc
Q 009397 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWN 199 (535)
Q Consensus 125 ~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~~~~~~--~l~~~~~---~~~~~~~~~~~~~~~~PlGVv~~i~p~n 199 (535)
+++|++++++|+||+..++. +|+..+++.++|+++..++ +..+... +......+...+++++|+|||++|+|||
T Consensus 102 ~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 180 (528)
T 3v4c_A 102 AEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASN 180 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSS
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCc
Confidence 99999999999999999985 8999999999999998876 3332211 1100012234678999999999999999
Q ss_pred hhhhhhH--HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEE
Q 009397 200 YPFHNIF--NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIF 274 (535)
Q Consensus 200 ~P~~~~~--~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f 274 (535)
||+...+ +++++||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|.+ +.++.|++ +|++|+|
T Consensus 181 ~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~f 260 (528)
T 3v4c_A 181 FPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGF 260 (528)
T ss_dssp STTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEE
T ss_pred chHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 9999855 89999999999999999999999999999999999999999999999999965 78888888 8999999
Q ss_pred eCChHHHHHHHHHHhccC--CceeeccCCcceEEEecCC---CHHHHHHHHHHHHHHhcCCCCCCccEEEEecc-cHHHH
Q 009397 275 VGSPGVGRMIMRNASKTL--TPVTLELGGKDAFIVCDDV---DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALF 348 (535)
Q Consensus 275 ~GS~~~g~~v~~~aa~~~--~pv~~elgGk~p~iV~~da---Dl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~-v~d~f 348 (535)
|||+.+|+.|++.+++++ ||+++|||||||+||++|| |++.|++.+++++|+|+||.|++++|||||++ +||+|
T Consensus 261 TGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f 340 (528)
T 3v4c_A 261 TGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRF 340 (528)
T ss_dssp ESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHH
T ss_pred ECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHH
Confidence 999999999999999999 9999999999999999999 88999999999999999999999999999997 99999
Q ss_pred HHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCC--
Q 009397 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT-- 426 (535)
Q Consensus 349 ~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~-- 426 (535)
+++|++++++++.| +++||++++...++++++++ ++|+++++||. ..|+|++|||+.+++++
T Consensus 341 ~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~-------~~g~~~~PTvl~~~~~~~~ 404 (528)
T 3v4c_A 341 TTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATE-------SSGRDASPNLFETTGAQFL 404 (528)
T ss_dssp HHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCC-------CCTTEECCEEEEEEHHHHH
T ss_pred HHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCC-------cCCceeccEEEEecCcccc
Confidence 99999999998754 57899988877777777663 37999999997 27999999999988887
Q ss_pred -CcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecC--CHHHHHHHHhhcC--cceEEECCCCccc---cCCC
Q 009397 427 -MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG--SQHRAREIAAQIQ--CGVAAINDFASNY---MCQV 498 (535)
Q Consensus 427 -~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~--d~~~~~~~a~~l~--~G~v~IN~~~~~~---~~~~ 498 (535)
|++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+|+||++.+.. ...|
T Consensus 405 ~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~p 484 (528)
T 3v4c_A 405 ADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMV 484 (528)
T ss_dssp HCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCC
T ss_pred cChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCC
Confidence 999999999999999999999999999999999999999999 8999999999998 9999999975421 2222
Q ss_pred C-----CCCCCCcC--cHHHhhccCceeeee
Q 009397 499 F-----KCIFDEFD--SVHVILNDPTKLKML 522 (535)
Q Consensus 499 ~-----~SG~G~~~--g~~gl~~~~~~~k~~ 522 (535)
+ .||+||++ |++|| +.|++.|++
T Consensus 485 fGG~~~~Sg~gr~~~~G~~gl-~~~~~~k~~ 514 (528)
T 3v4c_A 485 HGGPYPASTNFGATSVGTMSI-RRFLRPVAY 514 (528)
T ss_dssp CCCTTTTBSCTTCCSSSGGGG-GGGEEEEEE
T ss_pred CCCCCCCCCCCCCCCCcHHHH-HHhchhHHh
Confidence 3 79999986 99999 589999997
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.4e-85 Score=710.08 Aligned_cols=443 Identities=16% Similarity=0.209 Sum_probs=398.0
Q ss_pred CCCCCeEEeecCCCCcEE-EEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Q 009397 60 PQSETKVQCYEPATMKYL-GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK 138 (535)
Q Consensus 60 ~~~~~~~~~~~P~tg~~l-~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk 138 (535)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 82 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL 82 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 446778999999999999 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhhhhHHHHHHHHHHHHHhchh--hcCCccc---CCCcccccccceeeeecceEEEEEcCCchhhhhh--HHHHHH
Q 009397 139 TMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLA 211 (535)
Q Consensus 139 ~~~ea~~~Ei~~~~~~l~~~~~~~~~--~l~~~~~---~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~--~~~i~~ 211 (535)
+..++ .+|+..+++.++|++++.++ ++.+... +..........+++++|+|||++|+|||||+... .+++++
T Consensus 83 ~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ 161 (510)
T 1ez0_A 83 PEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTAS 161 (510)
T ss_dssp CHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHH
T ss_pred CHHHH-HHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHH
Confidence 99888 58999999999999998875 4432210 1000001113578999999999999999999984 499999
Q ss_pred HHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHHHHHHHHH
Q 009397 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288 (535)
Q Consensus 212 AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~a 288 (535)
||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|. .+.++.|++ .||+|+||||+.+|+.|++.+
T Consensus 162 ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 241 (510)
T 1ez0_A 162 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 241 (510)
T ss_dssp HHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999995 467888888 799999999999999999999
Q ss_pred hccC--CceeeccCCcceEEEecCCCHH--HHHHHHHHHHHHhcCCCCCCccEEEEecc-cHHHHHHHHHHHHhcccCCC
Q 009397 289 SKTL--TPVTLELGGKDAFIVCDDVDVP--HVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGP 363 (535)
Q Consensus 289 a~~~--~pv~~elgGk~p~iV~~daDl~--~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~-v~d~f~~~L~~~~~~l~~G~ 363 (535)
++++ ||+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++++
T Consensus 242 a~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~-- 319 (510)
T 1ez0_A 242 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP-- 319 (510)
T ss_dssp HHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC--
T ss_pred hccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC--
Confidence 9986 9999999999999999999999 99999999999999999999999999999 999999999999999874
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCcEeccCCCCCCCCCCCCceeccEEEEcCCCC---Cccccccccccee
Q 009397 364 PLAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT---MKLMQEEAFGPIM 439 (535)
Q Consensus 364 ~~~~~~~~Gpli~~~~~~~l~~~i~~a~~-~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~---~~i~~~E~fgPvl 439 (535)
||++++...++++++|+++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||+
T Consensus 320 --------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~--------~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl 383 (510)
T 1ez0_A 320 --------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQS 383 (510)
T ss_dssp --------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEE
T ss_pred --------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC--------CCCEecCEEEEecCCccccCHHHcCCccCCeE
Confidence 578888899999999999994 7999999996 2899999999988887 9999999999999
Q ss_pred eeeecCCHHHHHHHhhcCCCCcEEEEecCCH--HHHHHHHhhc--CcceEEECCCCcc---ccCCCC-----CCCCCCc-
Q 009397 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ--HRAREIAAQI--QCGVAAINDFASN---YMCQVF-----KCIFDEF- 506 (535)
Q Consensus 440 ~v~~~~~~~eai~~~n~~~~gL~asvfs~d~--~~~~~~a~~l--~~G~v~IN~~~~~---~~~~~~-----~SG~G~~- 506 (535)
+|++|+|+||||+++|+++|||+++|||+|. ++++++++++ ++|+|+||++... ....++ .||+|+.
T Consensus 384 ~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~ 463 (510)
T 1ez0_A 384 LIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST 463 (510)
T ss_dssp EEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC
T ss_pred EEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCC
Confidence 9999999999999999999999999999987 7899999999 8999999997542 222334 5888864
Q ss_pred -CcHHHhhccCceeeee
Q 009397 507 -DSVHVILNDPTKLKML 522 (535)
Q Consensus 507 -~g~~gl~~~~~~~k~~ 522 (535)
+|.+|| ++|++.|.+
T Consensus 464 ~~G~~gl-~~~~~~k~~ 479 (510)
T 1ez0_A 464 SVGAEAI-HRWLRPVAY 479 (510)
T ss_dssp SSSGGGG-GGGEEEEEE
T ss_pred CccHHHH-HHhheEEEE
Confidence 799999 578999987
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=5.3e-81 Score=711.26 Aligned_cols=425 Identities=21% Similarity=0.333 Sum_probs=392.4
Q ss_pred EcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHH
Q 009397 80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL 159 (535)
Q Consensus 80 v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~~ 159 (535)
++.++.+|+++++++|++||..|+.+|..+|.++|+++++.|++++++|++++++|+||++.++ .+||..+++.++|++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHH-HHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999 589999999999999
Q ss_pred HhchhhcCCc-ccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 009397 160 SEGEKWLKPE-YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (535)
Q Consensus 160 ~~~~~~l~~~-~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i 238 (535)
+..++..... ..+.. .+....++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++
T Consensus 623 ~~a~~~~g~~~~~~~~---~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell 699 (1001)
T 3haz_A 623 AQGRKLFGSETAMPGP---TGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALL 699 (1001)
T ss_dssp HHHHHHHSSCEECCCC---TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHhhcCccccccCC---CCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHH
Confidence 9888765432 12221 2456788999999999999999999999999999999999999999999999998887765
Q ss_pred HHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhcc---CCceeeccCCcceEEEecCCCH
Q 009397 239 QAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVTLELGGKDAFIVCDDVDV 313 (535)
Q Consensus 239 ~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~---~~pv~~elgGk~p~iV~~daDl 313 (535)
.++|+|+|++|+|+|+++.++.|++ +|++|+||||+.+|+.|++.++++ ++|+++|+|||||+||++|||+
T Consensus 700 ----~eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADl 775 (1001)
T 3haz_A 700 ----HEAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALP 775 (1001)
T ss_dssp ----HHHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCH
T ss_pred ----HHhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCH
Confidence 5589999999999997755888988 799999999999999999998864 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc
Q 009397 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK 393 (535)
Q Consensus 314 ~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~ 393 (535)
+.|++.+++|+|+|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.++++++++|++++++
T Consensus 776 d~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~ 855 (1001)
T 3haz_A 776 EQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTE 855 (1001)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCC--HHHHHHHhhcCCCCcEEEEecCCHH
Q 009397 394 GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCAVFSGSQH 471 (535)
Q Consensus 394 Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gL~asvfs~d~~ 471 (535)
| ++ +||... +.|+|++|||+.+ ++|.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+
T Consensus 856 g-~v-~gg~~~-----~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~ 926 (1001)
T 3haz_A 856 A-RL-HFAGPA-----PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDD 926 (1001)
T ss_dssp S-EE-EEECCC-----CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHH
T ss_pred C-eE-eccccC-----CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHH
Confidence 8 88 888732 3599999999974 7899999999999999999996 7999999999999999999999999
Q ss_pred HHHHHHhhcCcceEEECCCCcccc--CCCC----CCCCC-CcCcHHHhhccCceeeee
Q 009397 472 RAREIAAQIQCGVAAINDFASNYM--CQVF----KCIFD-EFDSVHVILNDPTKLKML 522 (535)
Q Consensus 472 ~~~~~a~~l~~G~v~IN~~~~~~~--~~~~----~SG~G-~~~g~~gl~~~~~~~k~~ 522 (535)
+++++++++++|+|+||+..++.. .+|| .||+| +.+|++|| ..|++.|++
T Consensus 927 ~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl-~~ft~~K~v 983 (1001)
T 3haz_A 927 SIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYL-ARFATEQTV 983 (1001)
T ss_dssp HHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSG-GGGEEEEEE
T ss_pred HHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHH-HHhceeeEE
Confidence 999999999999999999765442 3456 89999 67899999 589999987
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.5e-77 Score=637.05 Aligned_cols=401 Identities=15% Similarity=0.140 Sum_probs=328.0
Q ss_pred EeecCCCCcEEEEEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-------CCC
Q 009397 67 QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT-------GKT 139 (535)
Q Consensus 67 ~~~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~et-------Gk~ 139 (535)
-|+||+||+++++++.++.+|+++++++|++||..|+.+|..+|.++|+++++.|++++++|++++++|+ ||+
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred hh----hhhhhhHHHHHHHHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhc
Q 009397 140 MV----DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFS 215 (535)
Q Consensus 140 ~~----ea~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~a 215 (535)
+. ++ ..||..+++.++|++++++++.++.. +......+...+++++|+|||++|+||| |+... +++++||++
T Consensus 90 ~~~rl~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaa 165 (463)
T 2h5g_A 90 LLKRLSLS-TSKLNSLAIGLRQIAASSQDSVGRVL-RRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIAS 165 (463)
T ss_dssp HHHTTCCC-HHHHHHHHHHHHHHHHHCTTSTTCEE-EEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHH
T ss_pred hhhhhhhh-HHHHHHHHHHHHHHHHhhHhhcCccc-ccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHc
Confidence 87 35 48999999999999988877665431 1110012335678999999999999777 76655 799999999
Q ss_pred CCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEeCCccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCC
Q 009397 216 GNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT 293 (535)
Q Consensus 216 GN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~ 293 (535)
||+||+|||+.+|+++.++++++.++|.++| |+|++|+|+|..+.++.|+. ++|+|+||||+.+|+.|++.++ +|
T Consensus 166 GN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~ 242 (463)
T 2h5g_A 166 GNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GI 242 (463)
T ss_dssp TCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SS
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CC
Confidence 9999999999999999999999999998889 99999999995577888888 7999999999999999999888 89
Q ss_pred ceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccc
Q 009397 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 373 (535)
Q Consensus 294 pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gp 373 (535)
|+++|||||||+||++|||++.|++.+++|+|.| ||.|++++|||||+++|| ||
T Consensus 243 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p 296 (463)
T 2h5g_A 243 PVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TP 296 (463)
T ss_dssp CBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SH
T ss_pred CEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hH
Confidence 9999999999999999999999999999999999 999999999999999998 23
Q ss_pred cCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHH
Q 009397 374 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKL 453 (535)
Q Consensus 374 li~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 453 (535)
+ +++++++++++|++++.|+.. ...|+|+ +++|++++||+||||++|++|+|+||||++
T Consensus 297 ~--------~~~~i~~~~~~Ga~v~~G~~~-----~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~ 355 (463)
T 2h5g_A 297 L--------FDQIIDMLRVEQVKIHAGPKF-----ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDH 355 (463)
T ss_dssp H--------HHHHHHHHHHTTCEEEECHHH-----HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHH
T ss_pred H--------HHHHHHHHHhCCCEEEeCCcc-----cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHH
Confidence 3 334688888999999855431 1234332 578999999999999999999999999999
Q ss_pred hhcCCCCcEEEEecCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCC--Cc--CcHHHhhccCceeeee
Q 009397 454 ANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFD--EF--DSVHVILNDPTKLKML 522 (535)
Q Consensus 454 ~n~~~~gL~asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G--~~--~g~~gl~~~~~~~k~~ 522 (535)
+|+++|||+++|||+|.++++++++++++|+|+||+...+....|| .||+| ++ +|.+|| ++|++.|++
T Consensus 356 aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl-~~ft~~K~v 431 (463)
T 2h5g_A 356 IHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGL-EGLLTTKWL 431 (463)
T ss_dssp HHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCG-GGGEEEEEE
T ss_pred HHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHH-HHhceeEEE
Confidence 9999999999999999999999999999999999997655555556 89999 76 999999 589999998
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=6.4e-76 Score=628.13 Aligned_cols=413 Identities=17% Similarity=0.179 Sum_probs=366.6
Q ss_pred EEcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHH
Q 009397 79 YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWL 158 (535)
Q Consensus 79 ~v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l~~~ 158 (535)
.++.++.+|+++++++|++||..|+++|.++|.++|+++++.|++++++|++++++|+||+..+++..++..+++.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 45567889999999999999999999999999999999999999999999999999999999988666666666666555
Q ss_pred HHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 009397 159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (535)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i 238 (535)
++..+. .. .... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++
T Consensus 85 ~~~~~~-~g--~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll 158 (464)
T 3k9d_A 85 IKDMKT-IG--MLKE---DNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRII 158 (464)
T ss_dssp HTTCCC-SE--EEEE---ETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred hhcccc-cc--eecc---CCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHH
Confidence 443211 00 0000 12346788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCC-ccchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccC-CcceEEEecCCCHH
Q 009397 239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG-GKDAFIVCDDVDVP 314 (535)
Q Consensus 239 ~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elg-Gk~p~iV~~daDl~ 314 (535)
.+++.++|+|+|++|+|++. .+.++.|++ ++|+|+||||+. +++.+++++||+ +|+| ||+|+||++|||++
T Consensus 159 ~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl~ 233 (464)
T 3k9d_A 159 SEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANIP 233 (464)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCHH
T ss_pred HHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCHH
Confidence 99999999999999999995 478888988 799999999998 466777899999 7888 99999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHH-------hcccCCCCC-CCCCcccccCCHHHHHHHHHH
Q 009397 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV-------KSVSAGPPL-AGKYDMGALCLLEHSEKLQNL 386 (535)
Q Consensus 315 ~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~-------~~l~~G~~~-~~~~~~Gpli~~~~~~~l~~~ 386 (535)
.|++.+++|+|+|+||.|++++|||||+++||+|+++|+++. +++++|++. ++++++||+++.++++++.++
T Consensus 234 ~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~ 313 (464)
T 3k9d_A 234 RAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL 313 (464)
T ss_dssp HHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999986 466788887 678899999999999999999
Q ss_pred HHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHH----HHhhcCCCCcE
Q 009397 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV----KLANDSRYGLG 462 (535)
Q Consensus 387 i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gL~ 462 (535)
+++++.+|+++++||.. +++++|++. +|+||||++|++|+|+|||| +++|+++|||+
T Consensus 314 ~~~a~~~ga~vl~gg~~------------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~ 374 (464)
T 3k9d_A 314 AGLTVPADARVLIAEET------------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHT 374 (464)
T ss_dssp TTCCCCTTCCEEEEECC------------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhhhcCCCEEEEcCCC------------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCe
Confidence 99999999999999972 567888875 89999999999999999997 79999999999
Q ss_pred EEEecCCHHHHHHHHhhcCcceEEECCCCcc---------ccCCCC---CCCCCCcCcHHHhhccCceeeee
Q 009397 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASN---------YMCQVF---KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 463 asvfs~d~~~~~~~a~~l~~G~v~IN~~~~~---------~~~~~~---~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++|||+|.++++++++++++|+|+||++..+ ....+| .+|.|.++|..|+ .+|++.|++
T Consensus 375 a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~G~~G~g~~~~~~~~-~~~~~~k~v 445 (464)
T 3k9d_A 375 LIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGCGAVGGSSSSDNIGP-ENLFNIRRI 445 (464)
T ss_dssp EEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBCTGGGTCSCCSBCCG-GGSEEEEEE
T ss_pred EEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccCcCCCCCcCCCCCCH-HHheEEEEE
Confidence 9999999999999999999999999998653 122223 6899999999999 589999998
No 49
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=3.8e-75 Score=621.02 Aligned_cols=392 Identities=14% Similarity=0.104 Sum_probs=323.3
Q ss_pred HHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhhhhHHH-HHHHHHHHHHh
Q 009397 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASLGEIMT-TCEKITWLLSE 161 (535)
Q Consensus 87 dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~----~ea~~~Ei~~-~~~~l~~~~~~ 161 (535)
.+++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||+. .++..+|+.. +++.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999998 7875589988 89999999988
Q ss_pred chhhcCCcccCCCc-c---c-ccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHH
Q 009397 162 GEKWLKPEYRSSGR-S---M-IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236 (535)
Q Consensus 162 ~~~~l~~~~~~~~~-~---~-~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~ 236 (535)
.+++..+....+.. . . .+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.++++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 88776432211110 0 0 1234678999999999999999 9 8999999999999999999999999999999999
Q ss_pred HHHHHHHh----cCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEec
Q 009397 237 IIQAALAA----VGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (535)
Q Consensus 237 ~i~~~l~~----aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~ 309 (535)
++.++|.+ +|+|+|++|+|+ +. +.++.|+. ++|+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 99999999 999999999999 65 67888887 799999999999999999876 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC---CCCCCCCCcccccCCHHHHHHHHHH
Q 009397 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL 386 (535)
Q Consensus 310 daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~---G~~~~~~~~~Gpli~~~~~~~l~~~ 386 (535)
|||++.|++.+++++|+|+| .|++++|||||+++ |+|+++|.++++++++ |+|.+ +++
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHH
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcc
Confidence 99999999999999999999 99999999999999 9999999999999987 76531 445
Q ss_pred -HHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEE
Q 009397 387 -VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 465 (535)
Q Consensus 387 -i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asv 465 (535)
|++++ ++++||+ | ++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 310 ~i~~a~----~~~~gG~---------g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v 372 (468)
T 1vlu_A 310 YFDKLN----ELGKLTE---------A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAI 372 (468)
T ss_dssp HHHHHH----HHTCCCH---------H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEE
T ss_pred cccccc----eeeccCC---------C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEE
Confidence 66665 4777875 4 789987 7899999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcCcceEEECCCCccccCCCC---------CCCCCCcCcHHHhhccCceeeee
Q 009397 466 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQVF---------KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 466 fs~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~---------~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
||+|.++++++++++++|+|+||++..+....|| .||+|++ |.+|+ ++|++.|++
T Consensus 373 ~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl-~~f~~~K~v 436 (468)
T 1vlu_A 373 VTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGL-DGLVSYQYQ 436 (468)
T ss_dssp ECSCHHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCS-GGGEEEEEE
T ss_pred EeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHH-HHhcceEEE
Confidence 9999999999999999999999997544322222 7999999 99999 589999998
No 50
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=6.6e-74 Score=610.63 Aligned_cols=420 Identities=16% Similarity=0.174 Sum_probs=345.3
Q ss_pred EcCCCHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhhHHHHHHHH-HHH
Q 009397 80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKI-TWL 158 (535)
Q Consensus 80 v~~~~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~~ea~~~Ei~~~~~~l-~~~ 158 (535)
++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+..++...|+..+.+.+ +|+
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999999999999999999999999999999999755777777766 333
Q ss_pred HHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 009397 159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (535)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i 238 (535)
.. .+... ..+. ......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++
T Consensus 81 ~~--~~~~g--~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~ 153 (452)
T 3my7_A 81 KD--EQTCG--ILEE---DDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV 153 (452)
T ss_dssp TT--CCCSE--EC----------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred hh--ccccc--cccC---CCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence 22 11111 0111 12345678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCCc-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHH
Q 009397 239 QAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 315 (535)
Q Consensus 239 ~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~ 315 (535)
.+++.++|+|+|++|+|++.+ +.++.|++ ++++|+||||+.+ .+.+++++||+++|+|||+|+||++|||++.
T Consensus 154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~----~~~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGM----VKAAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHH----HHHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHH----HHHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 999999999999999999954 78899988 8999999999985 4456778999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCC
Q 009397 316 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 395 (535)
Q Consensus 316 aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga 395 (535)
|++.+++|+|+++||.|++++|||||+++||+|+++|+++ +||+++++++++++++++++.+.|+
T Consensus 230 Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 230 AVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 9999999999999999999999999999999999999885 3899999999999999987767788
Q ss_pred cEeccCCCCCCCCCCCCceeccEE-------EEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCC----CCcEEE
Q 009397 396 EILARGSFGHLSEGAVDQYFPPTV-------IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR----YGLGCA 464 (535)
Q Consensus 396 ~~l~gG~~~~~~~~~~g~~~~Ptv-------l~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gL~as 464 (535)
++ +||..... ....|+|++||+ +.+++++|++.+ |+||||++|++|+|+||||+++|++. |||+++
T Consensus 295 ~v-~G~~~~~~-~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~ 371 (452)
T 3my7_A 295 KI-VGQPATAI-AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSG 371 (452)
T ss_dssp GG-TTCCHHHH-HHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEE
T ss_pred eE-ecCccchh-HHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEE
Confidence 87 47653110 013589999997 568899999876 89999999999999999999999985 999999
Q ss_pred EecCCHHHHHH---HHhhcCcceEEECCCCcccc---------CCCCCCCCCCcCcHHHhhc----cCceeeeecCCCCC
Q 009397 465 VFSGSQHRARE---IAAQIQCGVAAINDFASNYM---------CQVFKCIFDEFDSVHVILN----DPTKLKMLPHFSVP 528 (535)
Q Consensus 465 vfs~d~~~~~~---~a~~l~~G~v~IN~~~~~~~---------~~~~~SG~G~~~g~~gl~~----~~~~~k~~~~~~~~ 528 (535)
|||+|.+++++ +++++++|+|+||++..+-. .+.+.-|.|.+||-..-.+ ++.+.|++-..+++
T Consensus 372 i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~~ 451 (452)
T 3my7_A 372 LYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN 451 (452)
T ss_dssp EESCTTTCHHHHHHHHHHCCCSEEEESCCCC----------------------------CCCCCGGGGEEEEEEECCC--
T ss_pred EEcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEeecCC
Confidence 99999877777 99999999999999866521 2222678888887766533 78899998776654
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=3.9e-72 Score=595.37 Aligned_cols=385 Identities=17% Similarity=0.183 Sum_probs=322.1
Q ss_pred HHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhh-------hhHHHHHH
Q 009397 85 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCE 153 (535)
Q Consensus 85 ~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~----~ea~~-------~Ei~~~~~ 153 (535)
.+|+++++++|++||..|+.+|..+|.++|+++++.|++|+++|++++++|+||+. .++.. .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999985 35532 47888999
Q ss_pred HHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHH
Q 009397 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233 (535)
Q Consensus 154 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~ 233 (535)
.++++++..+.. .. ..+......+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.+
T Consensus 105 ~l~~~a~~~~~~-g~-~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDPI-GE-MSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCCT-TC-EEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhcccc-Cc-cCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 999988765431 11 111100012345788999999999999998 8 5888999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEeCCc--cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEec
Q 009397 234 YFRIIQAALAAVGAPENLVDVITGFA--ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (535)
Q Consensus 234 ~~~~i~~~l~~aG~p~~~v~~v~~~~--~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~ 309 (535)
+.+++.++|.++|+|+|++|+|+|.+ +.++.|.. ++|+|+||||+.+|+.+++.+ +||+++|||||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 99999999999999999999999843 36777775 799999999999999998876 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccC---CCCCCCCCcccccCCHHHHHHHHHH
Q 009397 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL 386 (535)
Q Consensus 310 daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~---G~~~~~~~~~Gpli~~~~~~~l~~~ 386 (535)
|||++.|++.+++|+|.|+| .|++++|||||+++||+|+++|+++++++++ |+|. .+++
T Consensus 258 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAV 319 (444)
T ss_dssp TCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHH
T ss_pred CCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHH
Confidence 99999999999999999999 9999999999999999999999999999987 6532 2455
Q ss_pred HHHHHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEe
Q 009397 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 466 (535)
Q Consensus 387 i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvf 466 (535)
|+++. + | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 320 i~~a~-~------------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 372 (444)
T 4ghk_A 320 LEAAG-V------------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIV 372 (444)
T ss_dssp HHHTT-C------------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEE
T ss_pred HHhcc-c------------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 55431 1 1 11 35689999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCC----CcCcHHHhhccCceeeee
Q 009397 467 SGSQHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFD----EFDSVHVILNDPTKLKML 522 (535)
Q Consensus 467 s~d~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G----~~~g~~gl~~~~~~~k~~ 522 (535)
|+|.++++++++++++|+|+||++..+....|+ +||+| |++|++|| ++|++.|++
T Consensus 373 t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl-~~~t~~K~v 435 (444)
T 4ghk_A 373 TEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGL-EGLTSLKYV 435 (444)
T ss_dssp CSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECG-GGGEEEEEE
T ss_pred eCCHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHH-HhhceEEEE
Confidence 999999999999999999999998665544455 78887 78899999 589999987
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=4e-72 Score=592.46 Aligned_cols=383 Identities=17% Similarity=0.171 Sum_probs=331.8
Q ss_pred HHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhh-------hhhHHHHHH
Q 009397 85 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDAS-------LGEIMTTCE 153 (535)
Q Consensus 85 ~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la~~~~~etGk~~----~ea~-------~~Ei~~~~~ 153 (535)
-+++++++++|++||..|+++|..+|.++|+++++.|++|+++|++++++|+||+. .++. ..|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999986 5553 268999999
Q ss_pred HHHHHHHhchhhcCCcccCCCcccccccceeeeecceEEEEEcCCchhhhhhHHHHHHHHhcCCEEEEecCCCchhHHHH
Q 009397 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233 (535)
Q Consensus 154 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~n~P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~ 233 (535)
.++++++..+. .... .+......+...+++++|+|||++|+||| +..+++++++||++||+||+|||+.+|+++.+
T Consensus 93 ~l~~~a~~~~~-~g~~-~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 93 ACETVIGLKDP-VGEV-IDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHSCCC-TTCE-EEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHhcccc-cCcc-ccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 99999887654 2211 11000001234578899999999999886 46889999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEeCC-c-cchhhhhc--cccEEEEeCChHHHHHHHHHHhccCCceeeccCCcceEEEec
Q 009397 234 YFRIIQAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (535)
Q Consensus 234 ~~~~i~~~l~~aG~p~~~v~~v~~~-~-~~~~~L~~--~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~ 309 (535)
+++++.++|.++|+|+|++|+|+|. . +.++.|.. ++|+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~ 245 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDE 245 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeC
Confidence 9999999999999999999999984 4 45777776 799999999999999999887 599999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009397 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 389 (535)
Q Consensus 310 daDl~~aa~~i~~~~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~ 389 (535)
|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|.+++++++++
T Consensus 246 dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------------- 297 (427)
T 1o20_A 246 SADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE--------------------------- 297 (427)
T ss_dssp TSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE---------------------------
T ss_pred CCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe---------------------------
Confidence 99999999999999999999 99999999999999999999999999988652
Q ss_pred HHHcCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCC
Q 009397 390 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 469 (535)
Q Consensus 390 a~~~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d 469 (535)
+.||.+. .+ |+ ||| ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 298 --------~~gg~~~------~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 358 (427)
T 1o20_A 298 --------VRGCEKT------RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTEN 358 (427)
T ss_dssp --------EEECHHH------HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSC
T ss_pred --------eecChhh------hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCC
Confidence 1233210 12 33 885 34678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCcceEEECCCCccccCCCC----CCCCC----CcCcHHHhhccCceeeee
Q 009397 470 QHRAREIAAQIQCGVAAINDFASNYMCQVF----KCIFD----EFDSVHVILNDPTKLKML 522 (535)
Q Consensus 470 ~~~~~~~a~~l~~G~v~IN~~~~~~~~~~~----~SG~G----~~~g~~gl~~~~~~~k~~ 522 (535)
.++++++++++++|+|+||+........|+ .||+| +++|++|+ ++|++.|++
T Consensus 359 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl-~~~~~~k~v 418 (427)
T 1o20_A 359 YSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGL-RELTTYKFV 418 (427)
T ss_dssp HHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCT-GGGEEEEEE
T ss_pred HHHHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHH-HHHhceEEE
Confidence 999999999999999999997654444455 89987 57899999 589999997
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=96.83 E-value=0.35 Score=49.34 Aligned_cols=256 Identities=20% Similarity=0.212 Sum_probs=140.3
Q ss_pred cccceeeeecceEEEEEcCCc---hhhhhhHHHHHHHHhcCCEEEEecCC--CchhHHHHHHHHHHHHHHhcCCCCCcEE
Q 009397 179 HKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNGIVIKVSE--NASWSGCFYFRIIQAALAAVGAPENLVD 253 (535)
Q Consensus 179 ~~~~~~~~~PlGVv~~i~p~n---~P~~~~~~~i~~AL~aGN~VV~kps~--~~~~s~~~~~~~i~~~l~~aG~p~~~v~ 253 (535)
+.....++.|+--|++.+|.- ||- +.+...+||-.||..=|+-++| ........++ +.+.+|..+
T Consensus 120 G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~-----AA~l~Gv~e---- 189 (423)
T 4gic_A 120 GTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRGELNALVLA-----AAYISGVDR---- 189 (423)
T ss_dssp SCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHH-----HHHHHTCCE----
T ss_pred CCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCCCccHHHHH-----HHHhcCCcE----
Confidence 344566889999999999943 543 4455678999999974443333 2211121111 233477753
Q ss_pred EEe-CCccchhhhhc------cccEEEEeCChHHHHHHHHHHhccCCceeecc-CCcceEEEe-c-CCCHHHHHHHHHHH
Q 009397 254 VIT-GFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL-GGKDAFIVC-D-DVDVPHVAQIAVRA 323 (535)
Q Consensus 254 ~v~-~~~~~~~~L~~------~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~el-gGk~p~iV~-~-daDl~~aa~~i~~~ 323 (535)
+.. |..+.-.+|.- .||.|+=.|..=|...=..-.. .|-..+ .|.+=++|. + ++|.+.++..++..
T Consensus 190 Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g----~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQ 265 (423)
T 4gic_A 190 VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG----QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQ 265 (423)
T ss_dssp EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT----TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHH
T ss_pred EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC----CcCcccccccceEEEEeCCCCCHHHHHHHHHHh
Confidence 233 32333344422 7999999998776543322222 122222 344444443 3 38999988877755
Q ss_pred HHHhcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCC
Q 009397 324 ALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403 (535)
Q Consensus 324 ~f~~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~ 403 (535)
+=+. -. .+.++|..+ ++|.+++.+.+.+.-.. +.. .+ .++.+..+
T Consensus 266 AEHd----~~-a~~iLvT~s--~~la~~V~~~i~~~l~~-----------l~r---~~----i~~~sl~~---------- 310 (423)
T 4gic_A 266 AEHD----ED-AQAILISPD--AAHLEAVQASIERLLPG-----------MER---AE----VIRTSLER---------- 310 (423)
T ss_dssp HTTC----TT-CEEEEEESC--HHHHHHHHHHHHHHGGG-----------CTT---HH----HHHHHHHH----------
T ss_pred hccC----CC-CeEEEEeCc--HHHHHHHHHHHHHHHhh-----------Ccc---HH----HHHHHHhc----------
Confidence 4322 22 345566554 44444444444321000 001 11 12222211
Q ss_pred CCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcC-c
Q 009397 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-C 482 (535)
Q Consensus 404 ~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~-~ 482 (535)
+| .++.++|.+||++++|..--= -.-|.++|. +.+..+++ +
T Consensus 311 -------------------------------~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~---~~~l~~i~nA 352 (423)
T 4gic_A 311 -------------------------------RG---GMILVDDLEQAAAVANRIAPE-HLELSVESP---EVLVESIRNA 352 (423)
T ss_dssp -------------------------------HC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCH---HHHGGGCCCC
T ss_pred -------------------------------Cc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCH---HHHHhhCcEe
Confidence 11 245678999999999994222 357788886 45777775 9
Q ss_pred ceEEECCCCcc----ccCCC---C-CCCCCCcCcHHHhhccCceeeee
Q 009397 483 GVAAINDFASN----YMCQV---F-KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 483 G~v~IN~~~~~----~~~~~---~-~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
|.|++..+..- |...+ | .+|+.||.+.-+.. +|.+..++
T Consensus 353 GaIFlG~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~-~F~K~~s~ 399 (423)
T 4gic_A 353 GAIFMGRYTAEALGDYCAGPNHVLPTSGTARFSSPLGVY-DFQKRSSL 399 (423)
T ss_dssp SEEEEC----------------CCCCTTGGGTCCCCCGG-GGEEEEEE
T ss_pred ceeecCCCCchhhhhcCcCCCccCCCCCcccccCCCCHH-HeeeeeeE
Confidence 99999875321 22111 2 89999999998884 56655554
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=96.60 E-value=0.78 Score=46.89 Aligned_cols=258 Identities=17% Similarity=0.170 Sum_probs=145.1
Q ss_pred cccceeeeecceEEEEEcCC-chhh-hhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEEEe
Q 009397 179 HKKAKVEFHPLGVVGAIVSW-NYPF-HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 256 (535)
Q Consensus 179 ~~~~~~~~~PlGVv~~i~p~-n~P~-~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~aG~p~~~v~~v~ 256 (535)
+-....++.|+--|++.+|. .+|+ .+.+...+||-.+|+.=|+-++|-...... ++ +.+.+|..+ +..
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM~aiPAkVAGV~~Iv~~tPp~i~p~i-L~-----AA~l~Gv~e----Iy~ 183 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPPIADEI-LY-----AAQLCGVQD----VFN 183 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTHHHHHHHHHHHHHTCSEEEEEECSSCCHHH-HH-----HHHHTTCCE----EEE
T ss_pred CcEEEEEEeehheEEEEecCCCCCchhHHHHhhccHhhcCCCeEEEECCCCCCHHH-HH-----HHHHcCCCE----Eee
Confidence 33455678899999999995 3333 345566789999999877665553222221 11 223477753 222
Q ss_pred -CCccchhhhhc------cccEEEEeCChHHHHHHHHHHhccCCceeecc-CCcceEEEe--cCCCHHHHHHHHHHHHHH
Q 009397 257 -GFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL-GGKDAFIVC--DDVDVPHVAQIAVRAALQ 326 (535)
Q Consensus 257 -~~~~~~~~L~~------~v~~v~f~GS~~~g~~v~~~aa~~~~pv~~el-gGk~p~iV~--~daDl~~aa~~i~~~~f~ 326 (535)
|..+.-.+|.- .||+|+=.|..=|...=..-....+ .|-+.+ .|.+=++|. +++|.+.++..++-.+=+
T Consensus 184 vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G-~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEH 262 (434)
T 1kae_A 184 VGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEH 262 (434)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcC-ccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhcc
Confidence 33333334422 7999998888765432222211111 122222 344444443 348999988877654422
Q ss_pred hcCCCCCCccEEEEecccHHHHHHHHHHHHhcccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeccCCCCCC
Q 009397 327 SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 406 (535)
Q Consensus 327 ~~GQ~C~~~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~l~~~i~~a~~~Ga~~l~gG~~~~~ 406 (535)
. -. .+.++|..+ ++|.+++.+.+.+.-.. +.. .+.++.++
T Consensus 263 d----~~-a~aiLvT~s--~~la~~V~~ev~~ql~~-----------lpr-------~~ia~~sl--------------- 302 (434)
T 1kae_A 263 G----PD-SQVILLTPA--ADMARRVAEAVERQLAE-----------LPR-------AETARQAL--------------- 302 (434)
T ss_dssp C----TT-CEEEEEESC--HHHHHHHHHHHHHHHTT-----------CTT-------HHHHHHHH---------------
T ss_pred C----CC-CcEEEEECC--HHHHHHHHHHHHHHHHh-----------CCh-------HHHHHHHH---------------
Confidence 2 22 345555554 34444444443321000 000 11222221
Q ss_pred CCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHhhcCCCCcEEEEecCCHHHHHHHHhhcC-cceE
Q 009397 407 SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-CGVA 485 (535)
Q Consensus 407 ~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~asvfs~d~~~~~~~a~~l~-~G~v 485 (535)
..- .|+.++|.+||++++|..--= -.-|.++|. ..+..+++ +|.|
T Consensus 303 -----------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp---~~~l~~I~nAGaI 348 (434)
T 1kae_A 303 -----------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNA---RELVDSITSAGSV 348 (434)
T ss_dssp -----------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTH---HHHGGGCCSCSEE
T ss_pred -----------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCH---HHHHhhcCcccch
Confidence 111 356779999999999985222 467888887 46677775 9999
Q ss_pred EECCCCcc----ccCCC---C-CCCCCCcCcHHHhhccCceeeee
Q 009397 486 AINDFASN----YMCQV---F-KCIFDEFDSVHVILNDPTKLKML 522 (535)
Q Consensus 486 ~IN~~~~~----~~~~~---~-~SG~G~~~g~~gl~~~~~~~k~~ 522 (535)
++..+..- |...+ | .+|+.||.|.-+.. +|.+..++
T Consensus 349 FlG~~tpe~~GDY~aG~NHvLPT~G~AR~~sgLsV~-~F~K~~s~ 392 (434)
T 1kae_A 349 FLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLA-DFQKRMTV 392 (434)
T ss_dssp EESTTCCHHHHHHTSSSCCCCCCTTGGGTCCCSCGG-GGEEEEEE
T ss_pred hcCCCCchhhcccccCCCcccCCCCceeccCCCcHH-hccceeeE
Confidence 99976321 22221 2 89999999998884 56655544
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=70.94 E-value=6.4 Score=31.65 Aligned_cols=60 Identities=20% Similarity=0.254 Sum_probs=40.8
Q ss_pred CHHHHHHHHHHHHHHHH-cCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHHh
Q 009397 376 LLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 454 (535)
Q Consensus 376 ~~~~~~~l~~~i~~a~~-~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~ 454 (535)
+++.+++..+....+++ .|++++..|.. |.++.+ ++ .+-+.|+.|+|.+.|.++.
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~-------------~~~~eG-~~----------~~~~viieFpS~~aa~~~~ 71 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS-------------VTELEG-TA----------RARNVVIEFPSVQHAIDCY 71 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC-------------EEEEES-CC----------CSEEEEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC-------------ceEEec-CC----------cCeEEEEECCCHHHHHHHH
Confidence 45566666666655554 58888887652 555533 11 2477899999999999999
Q ss_pred hcCCC
Q 009397 455 NDSRY 459 (535)
Q Consensus 455 n~~~~ 459 (535)
|+.+|
T Consensus 72 ~s~~Y 76 (99)
T 2fiu_A 72 NSPEY 76 (99)
T ss_dssp HSHHH
T ss_pred cCHHH
Confidence 97654
No 56
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=51.17 E-value=28 Score=27.44 Aligned_cols=61 Identities=18% Similarity=0.190 Sum_probs=41.4
Q ss_pred CCHHHHHHHHHHHHHHHHc-CCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHHH
Q 009397 375 CLLEHSEKLQNLVNDALDK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKL 453 (535)
Q Consensus 375 i~~~~~~~l~~~i~~a~~~-Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 453 (535)
.+++.+++..+....++++ |++++..| . +.++.+- . -..-+.|+.|+|.+.|.++
T Consensus 14 ~d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~-------------~~~lEG~---------~-~~~~~viieFps~~aa~a~ 69 (94)
T 3lo3_A 14 KDAEKLQQYGARVASTLAKYSGEVLVKG-S-------------VEQLHGK---------F-EHKAQVILEFPSREDAYNW 69 (94)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCEEEEEE-E-------------CEEEESC---------C-CCSEEEEEEESSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEc-c-------------cccccCC---------C-CCCeEEEEECCCHHHHHHH
Confidence 3566666666666666654 78887766 3 3344321 0 1367889999999999999
Q ss_pred hhcCCC
Q 009397 454 ANDSRY 459 (535)
Q Consensus 454 ~n~~~~ 459 (535)
.|+.+|
T Consensus 70 y~SpeY 75 (94)
T 3lo3_A 70 YHSEEY 75 (94)
T ss_dssp HHSHHH
T ss_pred HCCHHH
Confidence 998655
No 57
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=43.25 E-value=19 Score=30.88 Aligned_cols=58 Identities=19% Similarity=0.178 Sum_probs=44.0
Q ss_pred HHhcCCCCCcEEEEeC--C----ccchhhhhc-cccEEEEeCCh-----HHHHHHHHHHhccCCceeecc
Q 009397 242 LAAVGAPENLVDVITG--F----AETGEALVS-SVDKIIFVGSP-----GVGRMIMRNASKTLTPVTLEL 299 (535)
Q Consensus 242 l~~aG~p~~~v~~v~~--~----~~~~~~L~~-~v~~v~f~GS~-----~~g~~v~~~aa~~~~pv~~el 299 (535)
|++.|+|-..|+-++. + +...+.+.+ .|+.|+++-+. .-+..+.+.|..+..|++..+
T Consensus 63 L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 63 LNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 5569999877776653 3 556666777 99999998655 368889999999999988655
No 58
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=37.16 E-value=23 Score=30.85 Aligned_cols=111 Identities=12% Similarity=0.127 Sum_probs=73.0
Q ss_pred eEEEEEcCCch-hhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHh-cCCCCCcEEEEe--CCccchhhh
Q 009397 190 GVVGAIVSWNY-PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGAPENLVDVIT--GFAETGEAL 265 (535)
Q Consensus 190 GVv~~i~p~n~-P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~-aG~p~~~v~~v~--~~~~~~~~L 265 (535)
|-|++++..+- +-...+..-...+++|..++- +.-|+.+ |.+ .|++-..++-++ |+++.++.+
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~A-----T~gTa~~--------L~e~~Gl~v~~v~k~~eGG~p~I~d~I 78 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA-----TGTTGNL--------ISRATGMNVNAMLSGPMGGDQQVGALI 78 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEE-----ETTHHHH--------HHHHHCCCCEEECCGGGTHHHHHHHHH
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEE-----ccHHHHH--------HHHHhCceeEEEEecCCCCCchHHHHH
Confidence 76666665543 444445555667778888774 2334432 334 899976665433 233456677
Q ss_pred hc-cccEEEEeCC-------hHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhc
Q 009397 266 VS-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 328 (535)
Q Consensus 266 ~~-~v~~v~f~GS-------~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~ 328 (535)
.+ .|+.|+||-+ ..-+..+.+.|.....|+...+ ..++.++.+.+++.
T Consensus 79 ~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~~~~ 134 (152)
T 1b93_A 79 SEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPHFND 134 (152)
T ss_dssp HTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGGGGS
T ss_pred HCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhccc
Confidence 77 9999999866 4577889999999989988654 34566666666554
No 59
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=35.03 E-value=47 Score=28.47 Aligned_cols=66 Identities=14% Similarity=0.170 Sum_probs=44.3
Q ss_pred cCCHHHHHHHHHHHHHHHH-cCCcEeccCCCCCCCCCCCCceeccEEEEcCCCCCcccccccccceeeeeecCCHHHHHH
Q 009397 374 LCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVK 452 (535)
Q Consensus 374 li~~~~~~~l~~~i~~a~~-~Ga~~l~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 452 (535)
+.+++.+++..+....+++ .|++++..|.. +.++.+-.. |. ..-+.|++|+|.+.|.+
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~-------------~~~lEG~~~-------e~-~~~~viieFPS~~aa~a 103 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF-------------ELMLIGPQD-------EH-WDHVFIAEYPSVAAFVE 103 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE-------------EEEEESCTT-------CC-CSEEEEEEESCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC-------------ceeEECCCC-------CC-CCeEEEEECCCHHHHHH
Confidence 4566777777777766654 48888887652 334433111 11 25788999999999999
Q ss_pred HhhcCCCC
Q 009397 453 LANDSRYG 460 (535)
Q Consensus 453 ~~n~~~~g 460 (535)
+.|+..|.
T Consensus 104 ~y~SpeYq 111 (143)
T 3hhl_A 104 MIRDPVYR 111 (143)
T ss_dssp HHHCHHHH
T ss_pred HHcCHHHH
Confidence 99886553
No 60
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=31.25 E-value=16 Score=32.60 Aligned_cols=118 Identities=14% Similarity=0.124 Sum_probs=77.3
Q ss_pred eeeecc-eEEEEEcCCch-hhhhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHh-cCCCCCcEEEEe--CC
Q 009397 184 VEFHPL-GVVGAIVSWNY-PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGAPENLVDVIT--GF 258 (535)
Q Consensus 184 ~~~~Pl-GVv~~i~p~n~-P~~~~~~~i~~AL~aGN~VV~kps~~~~~s~~~~~~~i~~~l~~-aG~p~~~v~~v~--~~ 258 (535)
.+.-|. |-|++++..+- +-...+..-...+++|..++- |.-|+.+ |.+ .|++-..++-++ |+
T Consensus 21 ~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~~--------L~e~~Gl~v~~v~k~~eGG~ 87 (178)
T 1vmd_A 21 KIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGAL--------LQEKLGLKVHRLKSGPLGGD 87 (178)
T ss_dssp EEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHHH--------HHHHHCCCCEECSCGGGTHH
T ss_pred eeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHHH--------HHHHhCceeEEEeecCCCCC
Confidence 344454 77777766544 444455556667788998874 3344432 334 899976655333 23
Q ss_pred ccchhhhhc-cccEEEEeCC-------hHHHHHHHHHHhccCCceeeccCCcceEEEecCCCHHHHHHHHHHHHHHhcC
Q 009397 259 AETGEALVS-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 329 (535)
Q Consensus 259 ~~~~~~L~~-~v~~v~f~GS-------~~~g~~v~~~aa~~~~pv~~elgGk~p~iV~~daDl~~aa~~i~~~~f~~~G 329 (535)
++.++.+.+ .|+.|+||-+ ..-+..+.+.|.....|+...+ ..++.++.+.+++..
T Consensus 88 pqI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 88 QQIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred chHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 345666777 9999999876 3457889999999989988654 356667777666653
No 61
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=30.66 E-value=1.2e+02 Score=21.57 Aligned_cols=36 Identities=6% Similarity=0.126 Sum_probs=27.0
Q ss_pred HHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 009397 94 QARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (535)
Q Consensus 94 ~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la 129 (535)
.++.....|..+|.++|..+.....+.-..+..++.
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667889999999999998777666556655543
No 62
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=27.90 E-value=12 Score=31.92 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=41.9
Q ss_pred HHh-cCCCCCcEEEEe-C-Cccchhhhhc-cccEEEEeCC-------hHHHHHHHHHHhccCCceeecc
Q 009397 242 LAA-VGAPENLVDVIT-G-FAETGEALVS-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLEL 299 (535)
Q Consensus 242 l~~-aG~p~~~v~~v~-~-~~~~~~~L~~-~v~~v~f~GS-------~~~g~~v~~~aa~~~~pv~~el 299 (535)
|.+ .|++-..++-++ + +++.++.+.+ .|+.|+||-+ ..-+..+.+.|.....|+...+
T Consensus 44 L~e~~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l 112 (134)
T 2xw6_A 44 IEEATGLTVEKLLSGPLGGDQQMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNP 112 (134)
T ss_dssp HHHHHCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECSH
T ss_pred HHHhhCceEEEEEecCCCCcchHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcCH
Confidence 344 799877666444 3 3456677777 9999999877 3356789999888888887654
No 63
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.07 E-value=1.7e+02 Score=22.14 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=27.0
Q ss_pred HHHHHhHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 009397 94 QARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (535)
Q Consensus 94 ~A~~A~~~W~~~~~~~R~~iL~~la~~l~~~~~~la 129 (535)
.++.....|..+|.++|..+.....+.-..+..++.
T Consensus 48 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 48 FSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666889999999999988777776666665543
Done!