Query 009399
Match_columns 535
No_of_seqs 274 out of 2280
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 04:19:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009399.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009399hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 9.3E-88 3.2E-92 723.7 50.7 502 28-532 3-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 1.8E-85 6.1E-90 704.5 51.4 486 31-530 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 4.4E-81 1.5E-85 675.9 46.8 490 26-531 5-497 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 9.9E-75 3.4E-79 620.0 40.9 455 31-530 2-472 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 1.4E-71 4.8E-76 598.1 39.1 447 47-529 10-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 5E-68 1.7E-72 574.8 42.9 457 33-529 24-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 1.3E-66 4.4E-71 563.9 46.0 459 29-530 18-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 9.1E-67 3.1E-71 565.3 44.1 451 45-531 32-529 (530)
9 1zr6_A Glucooligosaccharide ox 100.0 1.2E-66 4.2E-71 562.1 43.2 458 27-532 4-481 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 3E-64 1E-68 538.8 37.9 432 47-529 14-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 1.9E-40 6.6E-45 360.8 35.3 219 28-264 30-259 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 9E-34 3.1E-38 307.0 38.5 201 67-274 51-262 (524)
13 4bby_A Alkyldihydroxyacetoneph 100.0 2.6E-34 8.8E-39 319.2 23.2 204 70-274 198-408 (658)
14 4feh_A Oxidoreductase DPRE1; a 100.0 1.2E-31 4.1E-36 286.6 35.6 198 68-276 34-238 (481)
15 3pm9_A Putative oxidoreductase 100.0 9E-33 3.1E-37 295.2 21.0 206 67-276 41-253 (476)
16 2uuu_A Alkyldihydroxyacetoneph 100.0 4.6E-32 1.6E-36 296.1 20.0 200 75-275 135-339 (584)
17 1wvf_A 4-cresol dehydrogenase 100.0 8.3E-30 2.8E-34 276.3 23.1 198 75-278 54-268 (520)
18 2i0k_A Oxidoreductase; MIX alp 100.0 1.9E-29 6.4E-34 275.1 17.2 199 47-256 10-227 (561)
19 1e8g_A Vanillyl-alcohol oxidas 100.0 3.3E-28 1.1E-32 265.5 24.2 199 75-278 68-300 (560)
20 3js8_A Cholesterol oxidase; ch 100.0 5.8E-29 2E-33 266.0 17.2 193 51-254 9-221 (540)
21 2vfr_A Xylitol oxidase, aldito 100.0 1.2E-28 4.2E-33 260.6 17.4 176 69-257 12-190 (422)
22 1f0x_A DLDH, D-lactate dehydro 100.0 7.7E-29 2.6E-33 268.9 14.1 196 75-275 43-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 7.5E-25 2.6E-29 221.8 12.3 163 75-252 52-217 (322)
24 3i99_A UDP-N-acetylenolpyruvoy 99.9 2E-24 6.7E-29 220.9 12.7 164 75-252 28-199 (357)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 3.5E-24 1.2E-28 218.2 10.2 159 75-250 46-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 5.4E-23 1.9E-27 209.7 15.7 163 76-252 13-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 5.5E-22 1.9E-26 195.4 8.6 151 77-251 22-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 2.3E-19 8E-24 171.7 11.3 116 137-260 1-124 (219)
29 1ffv_C CUTM, flavoprotein of c 98.1 7.1E-06 2.4E-10 81.5 9.1 153 77-250 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.4 0.00018 6E-09 71.4 6.2 152 77-249 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 97.0 0.00055 1.9E-08 72.2 5.1 150 80-249 179-345 (462)
32 1t3q_C Quinoline 2-oxidoreduct 94.3 0.056 1.9E-06 53.2 6.2 149 77-248 4-174 (288)
33 3nvz_B Xanthine dehydrogenase/ 94.2 0.047 1.6E-06 54.3 5.6 151 77-248 9-189 (305)
34 3hrd_C Nicotinate dehydrogenas 93.2 0.12 4.2E-06 51.0 6.4 74 77-159 2-82 (296)
35 2vfr_A Xylitol oxidase, aldito 91.8 0.12 4.2E-06 53.6 4.6 28 495-524 387-414 (422)
36 1rm6_B 4-hydroxybenzoyl-COA re 89.4 0.45 1.5E-05 47.5 6.0 74 77-160 5-84 (324)
37 1wvf_A 4-cresol dehydrogenase 84.1 2 6.9E-05 45.7 7.8 27 496-522 481-508 (520)
38 4bby_A Alkyldihydroxyacetoneph 81.2 3.1 0.0001 45.7 8.0 28 495-522 625-653 (658)
39 3unc_A Xanthine dehydrogenase/ 75.5 2.8 9.4E-05 49.7 5.8 76 77-162 232-313 (1332)
40 1e8g_A Vanillyl-alcohol oxidas 51.6 33 0.0011 36.6 8.1 21 503-523 523-543 (560)
41 3pm9_A Putative oxidoreductase 45.9 9.7 0.00033 39.9 2.7 28 495-522 443-471 (476)
42 2i0k_A Oxidoreductase; MIX alp 45.4 8.6 0.00029 41.2 2.3 22 503-524 533-554 (561)
43 3zyv_A AOH1; oxidoreductase, m 41.9 18 0.0006 43.0 4.4 76 80-163 242-321 (1335)
44 3js8_A Cholesterol oxidase; ch 39.9 11 0.00037 40.2 1.9 23 502-524 511-533 (540)
45 1rzw_A Protein AF2095(GR4); be 38.1 42 0.0014 28.1 4.9 42 69-112 42-84 (123)
46 1wn2_A Peptidyl-tRNA hydrolase 37.1 55 0.0019 27.2 5.6 37 76-112 54-91 (121)
47 1xty_A PTH, peptidyl-tRNA hydr 36.8 57 0.0019 27.1 5.6 41 69-111 48-89 (120)
48 2zv3_A PTH, peptidyl-tRNA hydr 35.2 55 0.0019 26.9 5.2 37 75-111 47-84 (115)
49 1rlk_A Hypothetical protein TA 34.8 56 0.0019 27.0 5.2 38 75-112 49-87 (117)
50 1f0x_A DLDH, D-lactate dehydro 34.3 18 0.00062 38.7 2.6 22 502-524 536-557 (571)
51 1q7s_A BIT1, protein CGI-147; 28.8 98 0.0034 25.4 5.7 41 69-111 45-86 (117)
52 3p04_A Uncharacterized BCR; SE 27.6 72 0.0025 24.9 4.3 23 78-100 6-28 (87)
53 2uuu_A Alkyldihydroxyacetoneph 27.0 24 0.00082 37.9 2.0 27 496-522 552-579 (584)
54 2g2c_A Putative molybdenum cof 25.9 1.1E+02 0.0037 26.7 5.9 41 79-119 47-87 (167)
55 1yht_A DSPB; beta barrel, hydr 23.0 51 0.0017 33.0 3.4 28 85-112 92-121 (367)
56 1mkz_A Molybdenum cofactor bio 22.9 1.4E+02 0.0047 26.2 6.0 41 78-118 45-86 (172)
57 2lnd_A De novo designed protei 20.2 1.1E+02 0.0036 23.4 3.8 34 79-112 29-62 (112)
58 2pjk_A 178AA long hypothetical 20.1 1.6E+02 0.0056 25.9 5.9 39 79-117 58-97 (178)
59 3rfq_A Pterin-4-alpha-carbinol 20.1 1.7E+02 0.0057 26.1 6.0 41 78-118 66-106 (185)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=9.3e-88 Score=723.69 Aligned_cols=502 Identities=48% Similarity=0.945 Sum_probs=424.2
Q ss_pred CcccHHHHhccCCCCCCCCc-eeecCCCCChhhHhhhccccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEEE
Q 009399 28 VEDSFIHCLNSNSDLSVPFS-TFCDQTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRV 106 (535)
Q Consensus 28 ~~~~~~~cl~~~~~~~~~~~-~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v 106 (535)
+.++|.+||+.....+.|.+ .|++|++++|++.+.++.+|.||+....++|.+||+|+|++||+++|++|+++++||+|
T Consensus 3 ~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v 82 (518)
T 3vte_A 3 PRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRT 82 (518)
T ss_dssp HHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEE
Confidence 34689999998765555544 46899999999998888999999988889999999999999999999999999999999
Q ss_pred EeCCCCCCCCccccCCCCCeEEEEcCCCCCeEEcCCCCeEEEeCCCcHHHHHHHHHHcCCceeecCCCCCcccccccccC
Q 009399 107 RSGGHDYEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAEKSKIHGFPAGLCTSLGVGGHITG 186 (535)
Q Consensus 107 ~ggGh~~~g~~~~~~~~~~~ivIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~g 186 (535)
||||||+.+.+..... ++++|||++||+|++|+++++++||||+++++|+++|.++|.++.+++|.|+++||||+++|
T Consensus 83 rggGh~~~g~~~~~~~--~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~g 160 (518)
T 3vte_A 83 RSGGHDAEGMSYISQV--PFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSG 160 (518)
T ss_dssp ESSCCCTTCTTTCCSS--SEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHT
T ss_pred ECCCcCCCCCccCCCC--CeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCC
Confidence 9999999887743221 35999999999999999999999999999999999999998789999999999999999999
Q ss_pred CCCCCCcccCCccccceeEEEEEecCCcEecccCCCcchHHHhhcCCCCCcEEEEEEEEEEeecCceEEEEEEEecch-h
Q 009399 187 GAYGSMMRKYGLGADNVLDARIVDANGKILDREAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVFTVTKTLE-Q 265 (535)
Q Consensus 187 gg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~~~g~~GiVt~~~~k~~p~~~~~~~~~~~~~~~-~ 265 (535)
||+|+++++||+++|+|++++||++||++++.+.+++|||||+|||++|+|||||+++||++|.|+.++.|.+.+..+ +
T Consensus 161 Gg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~ 240 (518)
T 3vte_A 161 GGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIH 240 (518)
T ss_dssp CCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHH
T ss_pred CCCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHH
Confidence 999999999999999999999999999999755568999999999855899999999999999999888888877654 5
Q ss_pred hHHHHHHHHHHHhhcCCccceeEEEEeeccCCc--cCCCceEEEEEEEEEeCCHhHHHHHHhhhCccCCCCcccceecCh
Q 009399 266 GATKILYRWQQVADKLDEDLFIRVIIQAAEIPE--RKGQRTISTSYNALFLGGVDRLLQVMQESFPELGLTQKDCIETSW 343 (535)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~ 343 (535)
++.+++.+|+++.+++|+++++.+.+...++.+ ..++..+.+.+.++|+|+.+++.+.|.+.+++++....++.+++|
T Consensus 241 ~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w 320 (518)
T 3vte_A 241 GLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSW 320 (518)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECH
T ss_pred HHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecch
Confidence 578899999999999999999988876532100 112223567788999999999999998888888776677889999
Q ss_pred HHHHHHHhCCCCC-CC---ccccccCCCCCcccceeccccccCCCCHHHHHHHHHHHhhC--CCcEEEEeecCCCCCCCC
Q 009399 344 IKSVLYIAGYPSN-TP---PEVLLQGKSTFKNYFKAKSDFVREPIPETALEGLWKRFLEE--EGPLSIWNPYGGMMSKIA 417 (535)
Q Consensus 344 ~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~fk~~s~~~~~~l~~~~l~~~~~~~~~~--~~~~i~~~~~GG~i~~~~ 417 (535)
++++.+++.++.+ .+ .+.++++....+.+||.||+|+.++++++.++.+++++.+. +.+.+.++++||++++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~ 400 (518)
T 3vte_A 321 IDTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEIS 400 (518)
T ss_dssp HHHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSC
T ss_pred hhhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCC
Confidence 9999888766543 34 45555554445567899999999899999999999988763 347889999999999999
Q ss_pred CCCCCCccCCCceeEEEEEeeeCCChhhHHHHHHHHHHHHHhccccccCCCCcccccccCcccC-CCCCCCchhhhhhhh
Q 009399 418 ESAIPFPHRNGTLFKIQYVTNWQDGDKNMAKHMEWIRRLYNYMAPYVSMLPRAAYVNYRDLDLG-MNNKSNTSFIQATAW 496 (535)
Q Consensus 418 ~~ataf~~R~~~~~~~~~~~~w~~~~~~~~~~~~wi~~~~~~~~~~~~~~~~g~YvNy~d~dl~-~~~~~~~~~~~~~~~ 496 (535)
.++|||+||++++|.+++.+.|++. +.++++.+|++++++.+.|+.++.++++|+||.|.|++ .+...+.++..+..|
T Consensus 401 ~~~TAf~hR~~~~~~~~~~~~w~~~-~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~w 479 (518)
T 3vte_A 401 ESAIPFPHRAGIMYELWYTASWEKQ-EDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARIW 479 (518)
T ss_dssp TTSSSCCCCTTCCEEEEEEEEECCT-TTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHHH
T ss_pred CCCCcccccCcceEEEEEEEecCCc-chhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhhH
Confidence 9999999999558999999999543 35577889999999999999776678999999999876 211122334556679
Q ss_pred hhhhhhhhHHHHHHhHhhcCCCCCcccCCCCCCCCC
Q 009399 497 GSRYFKDNFMRLVRVKTKVDPDNFFRHEQSIPPLPL 532 (535)
Q Consensus 497 ~~~yyG~n~~RL~~IK~kyDP~~vF~~~q~i~~~~~ 532 (535)
++.|||+||+||++||+||||+|||+++|||+|.+-
T Consensus 480 ~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 480 GEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred HHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 999999999999999999999999999999998753
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=1.8e-85 Score=704.45 Aligned_cols=486 Identities=43% Similarity=0.797 Sum_probs=418.2
Q ss_pred cHHHHhccCCCCCCCCceeecCCCCChhhHhhhccccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCC
Q 009399 31 SFIHCLNSNSDLSVPFSTFCDQTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGG 110 (535)
Q Consensus 31 ~~~~cl~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggG 110 (535)
+|.+||+.....+ ...|++|+|++|++++.++.+|.||+....++|.+||+|+|++||+++|++|+++++||+|||||
T Consensus 1 ~~~~cl~~~~~~~--~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgG 78 (495)
T 3fw9_A 1 DLLSCLTFNGVRN--HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGG 78 (495)
T ss_dssp CHHHHHHHTTCCC--EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSC
T ss_pred ChhHHHhhcCCCC--CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCC
Confidence 4889999876422 35679999999999987789999999988899999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCeEEEEcCCCCCeEEcCCCCeEEEeCCCcHHHHHHHHHHcCCceeecCCCCCcccccccccCCCCC
Q 009399 111 HDYEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAEKSKIHGFPAGLCTSLGVGGHITGGAYG 190 (535)
Q Consensus 111 h~~~g~~~~~~~~~~~ivIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g 190 (535)
||+.|.+...+. ++++|||++||+|++|+++++++||||+++.+|+++|.++|+++.+++|.|+++||||+++|||+|
T Consensus 79 h~~~g~~~~~~~--ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G 156 (495)
T 3fw9_A 79 HSYEGLSYTSDT--PFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFG 156 (495)
T ss_dssp CCTTCTTSCCSS--CEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCC
T ss_pred cCCCCccccCCC--CeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCc
Confidence 999888765432 469999999999999999999999999999999999999977789999999999999999999999
Q ss_pred CCcccCCccccceeEEEEEecCCcEecccCCCcchHHHhhcCCCCCcEEEEEEEEEEeecCceEEEEEEEecch-hhHHH
Q 009399 191 SMMRKYGLGADNVLDARIVDANGKILDREAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVFTVTKTLE-QGATK 269 (535)
Q Consensus 191 ~~s~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~~~g~~GiVt~~~~k~~p~~~~~~~~~~~~~~~-~~~~~ 269 (535)
+++++||+++|+|++++||++||++++++.+++||||++|||++|+|||||+++||++|.|+....+.+.++.+ +++.+
T Consensus 157 ~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~ 236 (495)
T 3fw9_A 157 MMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATS 236 (495)
T ss_dssp TTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHH
T ss_pred ccccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHH
Confidence 99999999999999999999999999855578999999999555899999999999999999888888877653 55788
Q ss_pred HHHHHHHHhhcCCccceeEEEEeeccCCccCCCceEEEEEEEEEeCCHhHHHHHHhhhCccCCCCcccceecChHHHHHH
Q 009399 270 ILYRWQQVADKLDEDLFIRVIIQAAEIPERKGQRTISTSYNALFLGGVDRLLQVMQESFPELGLTQKDCIETSWIKSVLY 349 (535)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 349 (535)
++..|+++.+++|+++++.+.... . .....+.+.++|+|+.+++.+.|.+.+++++.....+.+++|+++..+
T Consensus 237 ~l~~~~~~~~~~~~~l~~~~~~~~-----~--~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~ 309 (495)
T 3fw9_A 237 LLHKWQFVAEELEEDFTLSVLGGA-----D--EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAY 309 (495)
T ss_dssp HHHHHHHHHHHSCTTEEEEEEEEE-----E--TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHH
T ss_pred HHHHHHHHHhcCChhHeEEEEEcC-----C--CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHH
Confidence 999999999999999998776431 1 123467788999999999999988878888776677889999999888
Q ss_pred HhCCCCCCCccccccCCCC-CcccceeccccccCCCCHHHHHHHHHHHhhCCCcEEEEeecCCCCCCCCCCCCCCccCCC
Q 009399 350 IAGYPSNTPPEVLLQGKST-FKNYFKAKSDFVREPIPETALEGLWKRFLEEEGPLSIWNPYGGMMSKIAESAIPFPHRNG 428 (535)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~-~~~~fk~~s~~~~~~l~~~~l~~~~~~~~~~~~~~i~~~~~GG~i~~~~~~ataf~~R~~ 428 (535)
+++++. ++.++++... .+.+||.||+|+.++++++.++.+++++.+.+.+.+.++++||++++++.++|||+||++
T Consensus 310 ~~~~~~---~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~TAf~hR~~ 386 (495)
T 3fw9_A 310 LAGLET---VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPHRSG 386 (495)
T ss_dssp HTTCSC---GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTSSCCCCTT
T ss_pred Hhcccc---hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCCCccccCc
Confidence 765432 3334444322 346789999999999999999999999987777789999999999999999999999986
Q ss_pred ceeEEEEEeeeCCC-hhhHHHHHHHHHHHHHhccccccCCCCcccccccCcccCCCCC-----CCchhhhhhhhhhhhhh
Q 009399 429 TLFKIQYVTNWQDG-DKNMAKHMEWIRRLYNYMAPYVSMLPRAAYVNYRDLDLGMNNK-----SNTSFIQATAWGSRYFK 502 (535)
Q Consensus 429 ~~~~~~~~~~w~~~-~~~~~~~~~wi~~~~~~~~~~~~~~~~g~YvNy~d~dl~~~~~-----~~~~~~~~~~~~~~yyG 502 (535)
.+|.+++.+.|.+. ++.++++.+|++++++.+.|+.++.++++|+||.|.|++.++. ++.++..+..|++.|||
T Consensus 387 ~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg 466 (495)
T 3fw9_A 387 TRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFL 466 (495)
T ss_dssp CCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHG
T ss_pred cceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhH
Confidence 68999999999532 3456778899999999999997766789999999998752110 01223345679999999
Q ss_pred hhHHHHHHhHhhcCCCCCcccCCCCCCC
Q 009399 503 DNFMRLVRVKTKVDPDNFFRHEQSIPPL 530 (535)
Q Consensus 503 ~n~~RL~~IK~kyDP~~vF~~~q~i~~~ 530 (535)
+||+||++||+||||+|||+++|+|+|.
T Consensus 467 ~n~~RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 467 SNYERLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp GGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred hHHHHHHHHHHhhCcHhhCCCCCCCCCC
Confidence 9999999999999999999999999985
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=4.4e-81 Score=675.90 Aligned_cols=490 Identities=44% Similarity=0.877 Sum_probs=408.8
Q ss_pred CCCcccHHHHhccCCCCCCCCceeecCCCCChhhHhhhccccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEE
Q 009399 26 DSVEDSFIHCLNSNSDLSVPFSTFCDQTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLR 105 (535)
Q Consensus 26 ~~~~~~~~~cl~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~ 105 (535)
.+..++|.+||.+.. |...|++|+++.|.+.+.++.+|.||+....++|.+||+|+|++||+++|++|+++++||+
T Consensus 5 ~~~~~~f~~~L~~~~----~~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~ 80 (500)
T 3tsh_A 5 PAAKEDFLGCLVKEI----PPRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIR 80 (500)
T ss_dssp ----CHHHHHHHHHS----CGGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEE
T ss_pred cccHHHHHHHHHhhC----CCCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEE
Confidence 456789999999875 3466899999999999999999999999888999999999999999999999999999999
Q ss_pred EEeCCCCCCCCccccCCCCCeEEEEcCCCCCeEEcCCCCeEEEeCCCcHHHHHHHHHHcCCceeecCCCCCccccccccc
Q 009399 106 VRSGGHDYEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAEKSKIHGFPAGLCTSLGVGGHIT 185 (535)
Q Consensus 106 v~ggGh~~~g~~~~~~~~~~~ivIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ 185 (535)
||||||++.|.+.+....+++++|||++||+|++|+++++++||||++++||+++|.++|..+.+++|.|++|||||+++
T Consensus 81 ~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~ 160 (500)
T 3tsh_A 81 VRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFA 160 (500)
T ss_dssp EESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHH
T ss_pred EEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccc
Confidence 99999999987755332225699999999999999999999999999999999999999988889999999999999999
Q ss_pred CCCCCCCcccCCccccceeEEEEEecCCcEecccCCCcchHHHhhcCCCCCcEEEEEEEEEEeecCceEEEEEEEecchh
Q 009399 186 GGAYGSMMRKYGLGADNVLDARIVDANGKILDREAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVFTVTKTLEQ 265 (535)
Q Consensus 186 ggg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~~~g~~GiVt~~~~k~~p~~~~~~~~~~~~~~~~ 265 (535)
|||+|.++++||+++|+|+++|||++||++++.+.+++||||++|||++|+|||||+++||++|.|+.+..+.+.+...+
T Consensus 161 ~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~ 240 (500)
T 3tsh_A 161 GGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSE 240 (500)
T ss_dssp TCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTT
T ss_pred cccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHH
Confidence 99999999999999999999999999999998667789999999988878999999999999999998887777776666
Q ss_pred hHHHHHHHHHHHhhcCCccceeEEEEeeccCCccCCCceEEEEEEEEEeCCHhHHHHHHhhhCccCCCCcccceecChHH
Q 009399 266 GATKILYRWQQVADKLDEDLFIRVIIQAAEIPERKGQRTISTSYNALFLGGVDRLLQVMQESFPELGLTQKDCIETSWIK 345 (535)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~ 345 (535)
.+.+++..|+.+.+++|+++...+..... ...+.++|.|+.+++.+.+.+.++.++.....+..++|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----------~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 309 (500)
T 3tsh_A 241 GAVDIINKWQVVAPQLPADLMIRIIAQGP-----------KATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQ 309 (500)
T ss_dssp THHHHHHHHHHHGGGSCTTEEEEEEESSS-----------EEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHH
T ss_pred HHHHHHHHHHHhhhccChhhEEEEEecCC-----------CcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhc
Confidence 67889999999999999998876654321 3456788999999988888877777777666777889988
Q ss_pred HHHHHhCCCCCCCccccccCCCCCcccceeccccccCCCCHHHHHHHHHHHhhCC-CcEEEEeecCCCCCCCCCCCCCCc
Q 009399 346 SVLYIAGYPSNTPPEVLLQGKSTFKNYFKAKSDFVREPIPETALEGLWKRFLEEE-GPLSIWNPYGGMMSKIAESAIPFP 424 (535)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fk~~s~~~~~~l~~~~l~~~~~~~~~~~-~~~i~~~~~GG~i~~~~~~ataf~ 424 (535)
...+..........+...++......+.+.++.+..++++++.++.+++.+...+ ...+.++++||+++++++++|+|+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~~~ata~~ 389 (500)
T 3tsh_A 310 SIPFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFP 389 (500)
T ss_dssp HHHHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSCTTSSSCC
T ss_pred cchhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCCCccCcCc
Confidence 7765543222221222233333333455667777878888888888877765544 467788999999999999999999
Q ss_pred cCCCceeEEEEEeeeCCChhhHHHHHHHHHHHHHhccccccCCCCcccccccCcccCCCCC--CCchhhhhhhhhhhhhh
Q 009399 425 HRNGTLFKIQYVTNWQDGDKNMAKHMEWIRRLYNYMAPYVSMLPRAAYVNYRDLDLGMNNK--SNTSFIQATAWGSRYFK 502 (535)
Q Consensus 425 ~R~~~~~~~~~~~~w~~~~~~~~~~~~wi~~~~~~~~~~~~~~~~g~YvNy~d~dl~~~~~--~~~~~~~~~~~~~~yyG 502 (535)
||++.++.+++...|++. +.+++..+|++++++.+.++.+..++++|+||+|.|++.+.. ....+...+.|++.|||
T Consensus 390 ~R~~~l~~i~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g 468 (500)
T 3tsh_A 390 HRKGVLFNIQYVNYWFAP-GAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFK 468 (500)
T ss_dssp CCTTCCEEEEEEEEECST-TCCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHG
T ss_pred ccCCcEEEEEEEEecCCc-chhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhh
Confidence 999778899999999543 234667899999999999998777789999999998763211 01123345689999999
Q ss_pred hhHHHHHHhHhhcCCCCCcccCCCCCCCC
Q 009399 503 DNFMRLVRVKTKVDPDNFFRHEQSIPPLP 531 (535)
Q Consensus 503 ~n~~RL~~IK~kyDP~~vF~~~q~i~~~~ 531 (535)
+||+||++||+||||+|||+++|||||.-
T Consensus 469 ~Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~ 497 (500)
T 3tsh_A 469 GNFERLAITKGKVDPTDYFRNEQSIPPLI 497 (500)
T ss_dssp GGHHHHHHHHHHHCTTCCSCCTTSCCCCC
T ss_pred HHHHHHHHHHHHhCcccccCCCCCCCCCC
Confidence 99999999999999999999999999974
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=9.9e-75 Score=619.96 Aligned_cols=455 Identities=23% Similarity=0.422 Sum_probs=368.6
Q ss_pred cHHHHhccCCCCCCCCceeecCCCCChhhHhhhccccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCC
Q 009399 31 SFIHCLNSNSDLSVPFSTFCDQTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGG 110 (535)
Q Consensus 31 ~~~~cl~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggG 110 (535)
+|.+||.++. ..|+.|+++.|+... ..||.|+ ...|.+||+|+|++||+++|++|+++++||++||||
T Consensus 2 ~l~~cl~~~~------~~v~~p~~~~y~~~~--~~~n~~~----~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggG 69 (473)
T 3rja_A 2 AIEACLSAAG------VPIDIPGTADYERDV--EPFNIRL----PYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGG 69 (473)
T ss_dssp HHHHHHHHTT------CCBCCTTSHHHHHHT--CCSBTTS----CCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred hHHHHHHhCC------CcEECCCCCchHHHH--HHhhccc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCC
Confidence 5899999984 358999999999874 3555555 469999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCeEEEEcCCCCCeE-EcCCCCeEEEeCCCcHHHHHHHHHHcCCceeecCCCCCcccccccccCCCC
Q 009399 111 HDYEGLSYVSEIETPFIIVDLARLRAIS-VDIESNSAWVQTGATIGEVYYRIAEKSKIHGFPAGLCTSLGVGGHITGGAY 189 (535)
Q Consensus 111 h~~~g~~~~~~~~~~~ivIdl~~~~~i~-~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~ 189 (535)
||+.+.+..... ++++|||++||+|. +|+++++++||||+++.+|+++|.++| ++.++.|.|+++||||+++|||+
T Consensus 70 h~~~g~~~~~~~--~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~ 146 (473)
T 3rja_A 70 HSYASFGFGGEN--GHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGF 146 (473)
T ss_dssp CCTTCGGGTSSS--SCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCC
T ss_pred CCCCCCcccCCC--CeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCC
Confidence 999865443211 45999999999996 999999999999999999999999996 47888999999999999999999
Q ss_pred CCCcccCCccccceeEEEEEecCCcEec-ccCCCcchHHHhhcCCCCCcEEEEEEEEEEeecCceEEEEEEEecch--hh
Q 009399 190 GSMMRKYGLGADNVLDARIVDANGKILD-REAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVFTVTKTLE--QG 266 (535)
Q Consensus 190 g~~s~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dLf~a~rG~~~g~~GiVt~~~~k~~p~~~~~~~~~~~~~~~--~~ 266 (535)
|..+++||+++|+|++++||++||++++ +..+++||||++|||+ |+|||||+++||++|.|+....+.+.+... ++
T Consensus 147 G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~ 225 (473)
T 3rja_A 147 GFSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTS 225 (473)
T ss_dssp CTTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHH
T ss_pred CcccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHHH
Confidence 9999999999999999999999999996 5567899999999997 899999999999999998887887777654 34
Q ss_pred HHHHHHHHHHHhh-cCCccceeEEEEeeccCCccCCCceEEEEEEEEEeCCHhHHHHHHhhhCccCC-CCcccce-ecCh
Q 009399 267 ATKILYRWQQVAD-KLDEDLFIRVIIQAAEIPERKGQRTISTSYNALFLGGVDRLLQVMQESFPELG-LTQKDCI-ETSW 343 (535)
Q Consensus 267 ~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~-~~~~ 343 (535)
+.+++.+|+++.. ++|+++++.+.+. .. + .+.+.++|+|+.+++.+++.+.+...+ +....+. +++|
T Consensus 226 ~~~~~~~~~~~~~~~~p~~l~~~~~~~-~~-----~----~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~ 295 (473)
T 3rja_A 226 ALKGIEAVEDYARWVAPREVNFRIGDY-GA-----G----NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNW 295 (473)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEEES-SS-----S----CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECH
T ss_pred HHHHHHHHHHHhhhCCChhHEEEEEEc-CC-----C----cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCH
Confidence 6789999999988 8999999887765 21 1 156778999999999988887543332 3445667 8999
Q ss_pred HHHHHHHhCCCCCCCccccccCCCCCcccceeccccccCCCCHHHHHHHHHHHhhCC-----C-cEEEEeecCC---CCC
Q 009399 344 IKSVLYIAGYPSNTPPEVLLQGKSTFKNYFKAKSDFVREPIPETALEGLWKRFLEEE-----G-PLSIWNPYGG---MMS 414 (535)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fk~~s~~~~~~l~~~~l~~~~~~~~~~~-----~-~~i~~~~~GG---~i~ 414 (535)
+++..+++... +.+.... .....|+.|+.+. ++++++.++.+++.+.+.. . +.++++++|| +++
T Consensus 296 ~~~~~~~~~~~---~~~~~~~---~~~~~~~~ks~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~ 368 (473)
T 3rja_A 296 IESVLSYSNFD---HVDFITP---QPVENFYAKSLTL-KSIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVT 368 (473)
T ss_dssp HHHHHHTSSSS---CCCCSSC---CCCBEEEEEEEEE-SCCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGG
T ss_pred HHHHHhhhcCC---CcccccC---CCCCcceEecccc-CCCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhc
Confidence 99877654321 1111111 0134577888875 4799999999999885421 1 3578999998 677
Q ss_pred CCCCCCCCCccCCCceeEEEEEeeeCCChhhHHHHHHHHHHHHHhccccccCCCCcccccccCcccCCCCCCCchhhhhh
Q 009399 415 KIAESAIPFPHRNGTLFKIQYVTNWQDGDKNMAKHMEWIRRLYNYMAPYVSMLPRAAYVNYRDLDLGMNNKSNTSFIQAT 494 (535)
Q Consensus 415 ~~~~~ataf~~R~~~~~~~~~~~~w~~~~~~~~~~~~wi~~~~~~~~~~~~~~~~g~YvNy~d~dl~~~~~~~~~~~~~~ 494 (535)
++++++|||+||+ ..|.+++.+.|.+..+.+++..+|++++++.+.+.....+.++|+||+|.+++ .+
T Consensus 369 ~v~~~~TAf~hR~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~-----------~~ 436 (473)
T 3rja_A 369 KVTNAETAYPHRD-KLWLIQFYDRYDNNQTYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD-----------RD 436 (473)
T ss_dssp GSCTTTSSCCCTT-CSEEEEEEEEECTTSCCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC-----------HH
T ss_pred CCCCCCCccccCC-ccEEEEEEEEeCCCCccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc-----------ch
Confidence 8889999999999 68999999999421112234457777776666544333346899999999864 23
Q ss_pred hhhhhhhhhhHHHHHHhHhhcCCCCCcccCCCCCCC
Q 009399 495 AWGSRYFKDNFMRLVRVKTKVDPDNFFRHEQSIPPL 530 (535)
Q Consensus 495 ~~~~~yyG~n~~RL~~IK~kyDP~~vF~~~q~i~~~ 530 (535)
+|.+.|||+||+||++||+||||+|+|+++|+|+|.
T Consensus 437 ~~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~ 472 (473)
T 3rja_A 437 YATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPV 472 (473)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCC
T ss_pred hHHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCC
Confidence 699999999999999999999999999999999985
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=1.4e-71 Score=598.11 Aligned_cols=447 Identities=23% Similarity=0.403 Sum_probs=348.7
Q ss_pred ceeecCCCCChhhHhhhccccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCe
Q 009399 47 STFCDQTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPF 126 (535)
Q Consensus 47 ~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~~~ 126 (535)
..+++|+|++|++++ ..||.||. .+|.+||+|+|++||+++|++|+++++||+||||||++.+.+.+.+ ++
T Consensus 10 ~~~~~p~~~~y~~~~--~~~n~~~~----~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~---~g 80 (501)
T 3pop_A 10 PFTVGREDPRYIELS--HSDNHRFV----VEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR---RD 80 (501)
T ss_dssp CEEEETTSTTHHHHT--CCSCTTSC----CCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC---CS
T ss_pred CceECCCCcchHHHH--HHHhhccC----CCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC---CE
Confidence 347899999999886 36777774 5899999999999999999999999999999999999998876543 24
Q ss_pred EEEEcCCCCCeEEcCCCCeEEEeCCCcHHHHHHHHHH-cCCceeecCCCCCcccccccccCCCCCCCcccCCccccceeE
Q 009399 127 IIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAE-KSKIHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLD 205 (535)
Q Consensus 127 ivIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~ggg~g~~s~~~G~~~d~v~~ 205 (535)
++|||++||+|++|+++++++||||+++.+|+++|.+ +| +.++.|.|+++||||+++|||+|+++++||+++|+|++
T Consensus 81 vvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~ 158 (501)
T 3pop_A 81 LVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHA 158 (501)
T ss_dssp EEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEE
T ss_pred EEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhEEE
Confidence 9999999999999999999999999999999999975 54 67889999999999999999999999999999999999
Q ss_pred EEEEe--cCCc--Eecc----cCCCcchHHHhhcCCCCCcEEEEEEEEEE----------eecC-ceEEEEEEEecch--
Q 009399 206 ARIVD--ANGK--ILDR----EAMGEDLFWAIRGGGGASFGIILSWKIKL----------VPVP-ETVTVFTVTKTLE-- 264 (535)
Q Consensus 206 ~~vV~--~~G~--i~~~----~~~~~dLf~a~rG~~~g~~GiVt~~~~k~----------~p~~-~~~~~~~~~~~~~-- 264 (535)
+|||+ +||+ +++. +.+|+|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.|+..
T Consensus 159 ~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~ 238 (501)
T 3pop_A 159 VEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMI 238 (501)
T ss_dssp EEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGC
T ss_pred EEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhc
Confidence 99999 8999 4432 35789999999998558999999999999 6654 4566666666543
Q ss_pred --hhHHHHHHHHHHHhh--cCCccc----eeEEEEeeccCCccCCCceEEEEEEEEEeCCHhHHHHHHhhhCcc------
Q 009399 265 --QGATKILYRWQQVAD--KLDEDL----FIRVIIQAAEIPERKGQRTISTSYNALFLGGVDRLLQVMQESFPE------ 330 (535)
Q Consensus 265 --~~~~~~~~~~~~~~~--~~~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~------ 330 (535)
+...+++..|+++.. ..|++. ...+.+... ..+ .+.+...+.|+.+++.+++.+.+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g 310 (501)
T 3pop_A 239 DETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHV----SSG----VLQLMVQQDADVDPEGEILARFVASLTEGTG 310 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECG----GGC----EEEEEEEEETTTCTTCHHHHHHHHHHHTTSS
T ss_pred CHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCC----CCC----eEEEEEEEeCChHHHHHHHHHHHHhhhhccC
Confidence 224567888888765 345443 223222211 111 2345567788876655555543321
Q ss_pred CCCCcccceecChHHHHHHHhCCCCCCCccccccCCCCCcccceeccccccCCCCHHHHHHHHHHHhhC---CCcEEEEe
Q 009399 331 LGLTQKDCIETSWIKSVLYIAGYPSNTPPEVLLQGKSTFKNYFKAKSDFVREPIPETALEGLWKRFLEE---EGPLSIWN 407 (535)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fk~~s~~~~~~l~~~~l~~~~~~~~~~---~~~~i~~~ 407 (535)
+.+... +.+++|++...... .+.+. .....++|.|+.++.++++++.++.+++.+... +.+.+.++
T Consensus 311 ~~p~~~-~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~ 379 (501)
T 3pop_A 311 VVGIPR-GGVMSWLTGTRYMS-QADCG---------DVMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFN 379 (501)
T ss_dssp CCCEEE-EEEEEHHHHHHHTC-BCSCG---------GGTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEE
T ss_pred CCccce-eEEeCHHHHHhhhc-CCCCC---------cccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEE
Confidence 222233 67889998765432 11110 001235778899988889999999999988753 23678899
Q ss_pred ecCCCCCCCCCCCCCCccCCCceeEEEEEeeeCCChhhHHHHHHHHHHHHHhcccccc------CCCCcccccccCcccC
Q 009399 408 PYGGMMSKIAESAIPFPHRNGTLFKIQYVTNWQDGDKNMAKHMEWIRRLYNYMAPYVS------MLPRAAYVNYRDLDLG 481 (535)
Q Consensus 408 ~~GG~i~~~~~~ataf~~R~~~~~~~~~~~~w~~~~~~~~~~~~wi~~~~~~~~~~~~------~~~~g~YvNy~d~dl~ 481 (535)
++||++++++.++|||+||+ .+|++++...|++. +.++++.+|++++++.+.+..+ +.++++|+||+|.|++
T Consensus 380 ~~GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~-~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~ 457 (501)
T 3pop_A 380 SYGGEINRRGPSDAAVPQRD-SVVKSSWFSAWQDA-ELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLL 457 (501)
T ss_dssp ECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG-GGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGG
T ss_pred ecCcccccCCCCCCCccCcC-ccEEEEEEEEeCCc-chHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCcccc
Confidence 99999999999999999999 68999999999643 3457788999999999876532 2357999999999976
Q ss_pred CCCCCCchhhhhhhhhhhhhhhhHHHHHHhHhhcCCCCCcccCCCCCC
Q 009399 482 MNNKSNTSFIQATAWGSRYFKDNFMRLVRVKTKVDPDNFFRHEQSIPP 529 (535)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~~vF~~~q~i~~ 529 (535)
..+.++ ....|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 458 ~~~~~~----~~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 458 DPARNR----SGEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp CTTTCC----SSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cccccc----ccchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 211000 12249999999999999999999999999999999987
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=5e-68 Score=574.76 Aligned_cols=457 Identities=26% Similarity=0.456 Sum_probs=342.0
Q ss_pred HHHhccCCCCCCCCceeecCCCCChhhHhhhccccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCC
Q 009399 33 IHCLNSNSDLSVPFSTFCDQTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHD 112 (535)
Q Consensus 33 ~~cl~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~ 112 (535)
.+||.... ..|++|+|++|+.++ +..||.||.. .|.+||+|+|++||+++|++|+++++||.||||||+
T Consensus 24 ~~~l~~~~------~~v~~p~d~~Y~~~~-~~~~n~~~~~----~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~ 92 (523)
T 2wdx_A 24 ERCLPPAG------PVKVTPDDPRYLNLK-LRGANSRFNG----EPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHC 92 (523)
T ss_dssp --CCCCCC------CEEECTTSTTHHHHH-TCSSCTTCCC----CCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCC
T ss_pred hhhcccCC------CeEECCCCcchHHHH-hhhhhhcccC----CCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCC
Confidence 48877753 568999999999886 3578889854 899999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCeEEEEcCCCCCeEEcCCCCeEEEeCCCcHHHHHHHHHH-cCCceeecCCCCCcccccccccCCCCCC
Q 009399 113 YEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAE-KSKIHGFPAGLCTSLGVGGHITGGAYGS 191 (535)
Q Consensus 113 ~~g~~~~~~~~~~~ivIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~ggg~g~ 191 (535)
+.+.+.... ++++|||++||+|++|+++++|+||||+++.+|+++|.+ +| +.++.|.|++|||||+++|||+|+
T Consensus 93 ~~g~~~~~~---~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~ 167 (523)
T 2wdx_A 93 FEDFVDNPD---VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYGP 167 (523)
T ss_dssp SSSSSSSTT---CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCCT
T ss_pred CCCCccCCC---CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCCc
Confidence 988776532 249999999999999999999999999999999999985 75 677889999999999999999999
Q ss_pred CcccCCccccceeEEEEEecC--CcEec---cc-CCCcc--hHHHhhcCCCCCcEEEEEEEEEE-----------eecCc
Q 009399 192 MMRKYGLGADNVLDARIVDAN--GKILD---RE-AMGED--LFWAIRGGGGASFGIILSWKIKL-----------VPVPE 252 (535)
Q Consensus 192 ~s~~~G~~~d~v~~~~vV~~~--G~i~~---~~-~~~~d--Lf~a~rG~~~g~~GiVt~~~~k~-----------~p~~~ 252 (535)
++++||+++|+|+++|||++| |+++. .. ++++| ||||+|||++|+|||||+++||+ +|.|+
T Consensus 168 ~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~ 247 (523)
T 2wdx_A 168 LSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPP 247 (523)
T ss_dssp THHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCC
T ss_pred ccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCc
Confidence 999999999999999999955 99753 22 24555 99999987668999999999999 99876
Q ss_pred -eEEEEEEEecch----hhHHHHHHHHHHHhhc--CCccce--eEEEEeeccCCccCCCceEEEEEEEEEeCCHhHHHHH
Q 009399 253 -TVTVFTVTKTLE----QGATKILYRWQQVADK--LDEDLF--IRVIIQAAEIPERKGQRTISTSYNALFLGGVDRLLQV 323 (535)
Q Consensus 253 -~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 323 (535)
.+..+.+.|+.. +...++++.|+++... .|++.. +...+..... ..+...+.+.+..+|.|+.++..+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~g~~~~~~~~ 325 (523)
T 2wdx_A 248 ATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNE--VPGMGESGFMMPIQVDATRPDARRL 325 (523)
T ss_dssp SEEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECC--CTTCTTCSEEEEEEEETTSTTHHHH
T ss_pred ccEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccC--CCCCcceeEEEEEEEeCCHHHHHHH
Confidence 455666776542 2345778888887654 455522 2222221110 1121012344566788887666665
Q ss_pred HhhhCc---c-CC-CCcccceecChHHHHHHHhCCCCCCCccccccCCCCCcccceeccccccCCCCHHHHHHHHHHHhh
Q 009399 324 MQESFP---E-LG-LTQKDCIETSWIKSVLYIAGYPSNTPPEVLLQGKSTFKNYFKAKSDFVREPIPETALEGLWKRFLE 398 (535)
Q Consensus 324 l~~~~~---~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fk~~s~~~~~~l~~~~l~~~~~~~~~ 398 (535)
+.+.+. + ++ +....+..++|.+... .... ...+++.++.+..+.++.+.++.+++.+..
T Consensus 326 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------~~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 389 (523)
T 2wdx_A 326 LDAHIEAVIDGVPPAEVPEPIEQRWLASTP-------------GRGG---RGPASKTKAGYLRKRLTDRQIQAVYENMTH 389 (523)
T ss_dssp HHHHHHHHHTTCTTCBCCCCEEEETTSSCC-------------CCCS---SCCEEEEEEEEESSCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhhcCCCccccceeccHHHHHH-------------hhcC---CCCceeeecccccCCCCHHHHHHHHHHHHh
Confidence 554322 1 22 2223334556654110 0000 011455677777667888889999998865
Q ss_pred C---CCcEEEEeecCCCCCCCCCCCCCCccCCCceeEEEEEeeeCCChhhHHHHHHHHHHHHHhccccc------cCCCC
Q 009399 399 E---EGPLSIWNPYGGMMSKIAESAIPFPHRNGTLFKIQYVTNWQDGDKNMAKHMEWIRRLYNYMAPYV------SMLPR 469 (535)
Q Consensus 399 ~---~~~~i~~~~~GG~i~~~~~~ataf~~R~~~~~~~~~~~~w~~~~~~~~~~~~wi~~~~~~~~~~~------~~~~~ 469 (535)
. +.+.+.++.+||++++++.++|+|+||+ .+|++++...|++. +.+++..+|++++++.+.... +....
T Consensus 390 ~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~-~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~ 467 (523)
T 2wdx_A 390 MDGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANP-GNEAKHLTWVRKLYADVYAETGGVPVPNDVSD 467 (523)
T ss_dssp CTTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSG-GGHHHHHHHHHHHHHHHTGGGTTSCCSCSSBC
T ss_pred cCCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCC-ccHHHHHHHHHHHHHHHHhhhcCCCccCCCCC
Confidence 3 2256788999999999999999999999 68999999999654 345778899999998887321 11235
Q ss_pred cccccccCcccCCCCCCCchhhhhhhhhhhhhhhhHHHHHHhHhhcCCCCCcccCCCCCC
Q 009399 470 AAYVNYRDLDLGMNNKSNTSFIQATAWGSRYFKDNFMRLVRVKTKVDPDNFFRHEQSIPP 529 (535)
Q Consensus 470 g~YvNy~d~dl~~~~~~~~~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~~vF~~~q~i~~ 529 (535)
|+|+||+|.+++..+ .+.+ ...|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 468 g~Y~Ny~d~~~~~~~-~~~s---~~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 468 GAYINYPDSDLADPG-LNTS---GVPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp CCCTTSCCGGGGCTT-TCCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cceecCCcccccccc-cccc---hhHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 899999999875200 0000 0139999999999999999999999999999999987
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.3e-66 Score=563.88 Aligned_cols=459 Identities=24% Similarity=0.438 Sum_probs=339.5
Q ss_pred cccHHHHhccCCCCCCCCceeecCCCCChhhHhhhccccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEe
Q 009399 29 EDSFIHCLNSNSDLSVPFSTFCDQTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRS 108 (535)
Q Consensus 29 ~~~~~~cl~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~g 108 (535)
.-+...|+.... ..|++|+|++|++++ +..||.||.. .|.+||+|+|++||+++|++|+++++||.|||
T Consensus 18 ~~~~~~~~~~~~------~~v~~p~d~~Y~~~~-~~~~n~~~~~----~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrg 86 (521)
T 2ipi_A 18 EFDGGACGARTA------LVKVDRVDRRYQDLV-TRGFNGRFRG----RPDVVYVVHTADQVVDAVNQAMAAGQRIAVRS 86 (521)
T ss_dssp -----------C------CCEEESSSTTHHHHH-TCCSCTTCCC----CCSEEEECSSHHHHHHHHHHHHHHTCCEEEES
T ss_pred hccccccccCCC------CeEECCCCcchHHHH-hccccccccC----CCCEEEEcCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 335567776653 568999999999886 3577888854 89999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCCCeEEEEcCCCCCeEEcCCCCeEEEeCCCcHHHHHHHHH-HcCCceeecCCCCCcccccccccCC
Q 009399 109 GGHDYEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIA-EKSKIHGFPAGLCTSLGVGGHITGG 187 (535)
Q Consensus 109 gGh~~~g~~~~~~~~~~~ivIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~-~~g~~l~~~~g~~~~vgigG~~~gg 187 (535)
|||++.+.+.... ++++|||++||+|++|+++++|+||||+++.+|+++|. ++| +.+++|.|+++||||+++||
T Consensus 87 gGh~~~g~~~~~~---~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gG 161 (521)
T 2ipi_A 87 GGHCFEGFVDDPA---VRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGG 161 (521)
T ss_dssp SCCCTTCGGGCTT---CCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTT
T ss_pred CCcCCCCCcccCC---CeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCC
Confidence 9999988765432 24999999999999999999999999999999999997 675 67889999999999999999
Q ss_pred CCCCCcccCCccccceeEEEEEecC--CcEec---cc-CCCc--chHHHhhcCCCCCcEEEEEEEEEE-----------e
Q 009399 188 AYGSMMRKYGLGADNVLDARIVDAN--GKILD---RE-AMGE--DLFWAIRGGGGASFGIILSWKIKL-----------V 248 (535)
Q Consensus 188 g~g~~s~~~G~~~d~v~~~~vV~~~--G~i~~---~~-~~~~--dLf~a~rG~~~g~~GiVt~~~~k~-----------~ 248 (535)
|+|+++++||+++|+|+++|||++| |+++. .. .+++ |||||+|||++|+|||||+++||+ +
T Consensus 162 g~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~ 241 (521)
T 2ipi_A 162 GYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLL 241 (521)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSS
T ss_pred CCCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCccccc
Confidence 9999999999999999999999977 99742 22 2455 499999997658999999999999 9
Q ss_pred ecCc-eEEEEEEEecch----hhHHHHHHHHHHHhhc--CCcc----ceeEEEEeeccCCccCCCceEEEEEEEEEeCCH
Q 009399 249 PVPE-TVTVFTVTKTLE----QGATKILYRWQQVADK--LDED----LFIRVIIQAAEIPERKGQRTISTSYNALFLGGV 317 (535)
Q Consensus 249 p~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (535)
|.|+ .+..+.+.|+.. +...++++.|+++... .|++ +...+.+... ..+ .+.+...|.|+.
T Consensus 242 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~~----~~~----~~~~~~~~~g~~ 313 (521)
T 2ipi_A 242 PKAPTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNSR----AAG----QILLDIQIDGGL 313 (521)
T ss_dssp CBCCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEECT----TSC----EEEEEEEEETTS
T ss_pred CCCCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEeccC----CCC----ceEEEEEeccCH
Confidence 9875 345555555432 2235778888887654 4554 3333322211 111 234455688887
Q ss_pred hHHHHHHhhhCc---c-CC-CCcccceecChHHHHHHHhCCCCCCCccccccCCCCCcccceeccccccCCCCHHHHHHH
Q 009399 318 DRLLQVMQESFP---E-LG-LTQKDCIETSWIKSVLYIAGYPSNTPPEVLLQGKSTFKNYFKAKSDFVREPIPETALEGL 392 (535)
Q Consensus 318 ~~~~~~l~~~~~---~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fk~~s~~~~~~l~~~~l~~~ 392 (535)
++..+.+.+.+. . ++ +....+..++|.+........ + .. ..+++.++.++.++++.+.++.+
T Consensus 314 ~~~~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~----~--------~~-~~~~~~~s~~~~~~~~~~~i~~~ 380 (521)
T 2ipi_A 314 DGAEALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKFD----T--------GG-FDRTKSKGAYLRKPWTAAQAATL 380 (521)
T ss_dssp TTHHHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCC----C--------TT-CCEEEEEEEEESSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcCC----C--------CC-CccceeeccccccCCCHHHHHHH
Confidence 666655554322 1 22 223345567888754221110 0 00 02345567777667888889999
Q ss_pred HHHHhhCC--CcEEEEeecCCCCCCCCCCCCCCccCCCceeEEEEEeeeCCChhhHHHHHHHHHHHHHhcccccc-----
Q 009399 393 WKRFLEEE--GPLSIWNPYGGMMSKIAESAIPFPHRNGTLFKIQYVTNWQDGDKNMAKHMEWIRRLYNYMAPYVS----- 465 (535)
Q Consensus 393 ~~~~~~~~--~~~i~~~~~GG~i~~~~~~ataf~~R~~~~~~~~~~~~w~~~~~~~~~~~~wi~~~~~~~~~~~~----- 465 (535)
++.+...+ .+.+.++++||++++++.++|+|+||+ .+|++++.+.|++. +.+++..+|++++++.+.....
T Consensus 381 ~~~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~~~g~p~~ 458 (521)
T 2ipi_A 381 YRHLSADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDP-AHDDANLAWIREIYREIFATTGGVPVP 458 (521)
T ss_dssp HHHHHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG-GGHHHHHHHHHHHHHHHTTTTTSSCCS
T ss_pred HHHHHhCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCC-CchHHHHHHHHHHHHHHHhhhcCCCcc
Confidence 99887643 257889999999999999999999999 68999999999654 3456778999999998873221
Q ss_pred -CCCCcccccccCcccCCCCCCCchhhhhhhhhhhhhhhhHHHHHHhHhhcCCCCCcccCCCCCCC
Q 009399 466 -MLPRAAYVNYRDLDLGMNNKSNTSFIQATAWGSRYFKDNFMRLVRVKTKVDPDNFFRHEQSIPPL 530 (535)
Q Consensus 466 -~~~~g~YvNy~d~dl~~~~~~~~~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~~vF~~~q~i~~~ 530 (535)
....|+|+||+|.+++..+-+ .+ ...|++.|||+||+||++||+||||+|||+++|+|+|+
T Consensus 459 ~~~~~g~Y~Ny~d~~~~~~~~~-~~---~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 459 DDRTEGTFINYPDVDLVDERWN-TS---GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp SSSBCCCCTTSCCGGGGCTTTS-CC---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred cCCCCceEeCCCCccccccccc-cc---hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 123589999999987510000 00 11499999999999999999999999999999999985
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=9.1e-67 Score=565.30 Aligned_cols=451 Identities=26% Similarity=0.461 Sum_probs=340.3
Q ss_pred CCceeecCCCCChhhHhhhccccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCC
Q 009399 45 PFSTFCDQTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIET 124 (535)
Q Consensus 45 ~~~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~ 124 (535)
+...|+.|++++|+.++. .||.||. ..|.+||+|++++||+++|++|+++++||+||||||++.+.+....
T Consensus 32 ~~~~v~~p~~~~Y~~~~~--~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~--- 102 (530)
T 2y3s_A 32 KHIDSVAPGDIRYEDLRR--GENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSD--- 102 (530)
T ss_dssp --CCEECTTSTTHHHHTC--CSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTT---
T ss_pred CCceEECCCCccHHHHHh--Hhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCC---
Confidence 345689999999999863 6788885 4899999999999999999999999999999999999988665432
Q ss_pred CeEEEEcCCCCCeEEcCCCCeEEEeCCCcHHHHHHHHHH-cCCceeecCCCCCcccccccccCCCCCCCcccCCccccce
Q 009399 125 PFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAE-KSKIHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNV 203 (535)
Q Consensus 125 ~~ivIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~ggg~g~~s~~~G~~~d~v 203 (535)
++++|||++||+|++|+++++|+||||+++.+|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|
T Consensus 103 ~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v 180 (530)
T 2y3s_A 103 VRVVMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYL 180 (530)
T ss_dssp CCEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGE
T ss_pred CeEEEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhhe
Confidence 249999999999999999999999999999999999985 75 678889999999999999999999999999999999
Q ss_pred eEEEEEe--cCCcEec---ccC-CCcc--hHHHhhcCCCCCcEEEEEEEEEE------------eecCc-eEEEEEEEec
Q 009399 204 LDARIVD--ANGKILD---REA-MGED--LFWAIRGGGGASFGIILSWKIKL------------VPVPE-TVTVFTVTKT 262 (535)
Q Consensus 204 ~~~~vV~--~~G~i~~---~~~-~~~d--Lf~a~rG~~~g~~GiVt~~~~k~------------~p~~~-~~~~~~~~~~ 262 (535)
+++|||+ ++|+++. ... +++| ||||+|||++|+|||||+++||+ +|.|+ .+..+.+.|+
T Consensus 181 ~~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 260 (530)
T 2y3s_A 181 HAVEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWP 260 (530)
T ss_dssp EEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEE
T ss_pred eeEEEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEec
Confidence 9999999 5599742 222 4555 99999998668999999999999 88875 4555556554
Q ss_pred ch----hhHHHHHHHHHHHhhc--CCcc----ceeEEEEeeccCCccCCCceEEEEEEEEEeCCHhHHHHHHhhhCc---
Q 009399 263 LE----QGATKILYRWQQVADK--LDED----LFIRVIIQAAEIPERKGQRTISTSYNALFLGGVDRLLQVMQESFP--- 329 (535)
Q Consensus 263 ~~----~~~~~~~~~~~~~~~~--~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~--- 329 (535)
.. +...++++.|+++... .|++ +...+.+... ... .+.+...|.|+.++..+++.+.+.
T Consensus 261 ~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~g~~~~~~~~l~p~~~~l~ 332 (530)
T 2y3s_A 261 WEGLDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRS------QSG--ALAMTTQLDATGPDAEKRLETYLAAVS 332 (530)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECG------GGS--EEEEEEEEECCSTTHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccC------CCC--cEEEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 32 2345678888887654 4544 2333222211 111 234455688887666655554321
Q ss_pred c-CC-CCcccceecChHHHHHHHhCCCCCCCccccccCCCCCcccceeccccccCCCCHHHHHHHHHHHhhCC----CcE
Q 009399 330 E-LG-LTQKDCIETSWIKSVLYIAGYPSNTPPEVLLQGKSTFKNYFKAKSDFVREPIPETALEGLWKRFLEEE----GPL 403 (535)
Q Consensus 330 ~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fk~~s~~~~~~l~~~~l~~~~~~~~~~~----~~~ 403 (535)
. ++ +....+..++|.+........+.+ . .. .+++.++.++.++++++.++.+++.+...+ .+.
T Consensus 333 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~-~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 401 (530)
T 2y3s_A 333 EGVGVQPHSDTRRLPWLHSTRWPGIAGDG--------D--MT-GRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGV 401 (530)
T ss_dssp TTCSSCCEEEEEEEEHHHHTTCHHHHCCC--------C--CC-SEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCE
T ss_pred hhcCCCccceeeeccHHHHHHhhcCCCCC--------c--cc-ccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceE
Confidence 1 23 223445667888744322111111 0 01 245667777776788889999999887532 267
Q ss_pred EEEeecCCCCCCCCCCCCCCccCCCceeEEEEEeeeCCChhhHHHHHHHHHHHHHhcccccc------CCCCcccccccC
Q 009399 404 SIWNPYGGMMSKIAESAIPFPHRNGTLFKIQYVTNWQDGDKNMAKHMEWIRRLYNYMAPYVS------MLPRAAYVNYRD 477 (535)
Q Consensus 404 i~~~~~GG~i~~~~~~ataf~~R~~~~~~~~~~~~w~~~~~~~~~~~~wi~~~~~~~~~~~~------~~~~g~YvNy~d 477 (535)
+.++++||++++++.++|+|+||+ .+|++++...|++. +.+++..+|++++++.+.+... ....|+|+||+|
T Consensus 402 ~~~~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~-~~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d 479 (530)
T 2y3s_A 402 VALIAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWEDP-AQDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPD 479 (530)
T ss_dssp EEEEECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCT-TCHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCC
T ss_pred EEEEecCCccccCCCCcCcccccc-cceeEEEEEecCCC-cchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcC
Confidence 889999999999999999999999 68999999999543 2356778999999998873221 123589999999
Q ss_pred cccCCCCCCCchhhhhhhhhhhhhhhhHHHHHHhHhhcCCCCCcccCCCCCCCC
Q 009399 478 LDLGMNNKSNTSFIQATAWGSRYFKDNFMRLVRVKTKVDPDNFFRHEQSIPPLP 531 (535)
Q Consensus 478 ~dl~~~~~~~~~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~~vF~~~q~i~~~~ 531 (535)
.+++..+- +.+ .+.|++.|||+||+||++||+||||+|||+++|+|+|+|
T Consensus 480 ~~~~~~~~-~~s---~~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~~ 529 (530)
T 2y3s_A 480 VDLADEEW-NTS---GVPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVPP 529 (530)
T ss_dssp GGGGCTTT-CCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred cccccccc-ccc---hhHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCCC
Confidence 98752000 000 124999999999999999999999999999999999874
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=1.2e-66 Score=562.13 Aligned_cols=458 Identities=23% Similarity=0.430 Sum_probs=352.4
Q ss_pred CCcccHHHHhccCCCCCCCCceeecCCCCChhhHhhhccccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEEE
Q 009399 27 SVEDSFIHCLNSNSDLSVPFSTFCDQTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRV 106 (535)
Q Consensus 27 ~~~~~~~~cl~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v 106 (535)
...+.|.+||.... ..++.|+++.|.... . +|+.+....|.+||+|+|++||+++|++|+++++||+|
T Consensus 4 ~~~~~l~~~l~~~~------~~~~~~~~~~y~~~~--~----~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v 71 (503)
T 1zr6_A 4 AEFNSINACLAAAD------VEFHEEDSEGWDMDG--T----AFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISA 71 (503)
T ss_dssp CTTCHHHHHHHHTT------CEECCTTSHHHHHHT--S----CSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHhhCcCC------ceecCCCccchHHHh--h----hhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEE
Confidence 34578999998652 246789999998763 2 34443446999999999999999999999999999999
Q ss_pred EeCCCCCCCCccc-cCCCCCeEEEEcCCCCCeEEcCCCCeEEEeCCCcHHHHHHHHHHcCCceeecCCCCCccccccccc
Q 009399 107 RSGGHDYEGLSYV-SEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAEKSKIHGFPAGLCTSLGVGGHIT 185 (535)
Q Consensus 107 ~ggGh~~~g~~~~-~~~~~~~ivIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ 185 (535)
||||||+.+.+.+ .. ++++|||++||+|++| ++++|+||||+++.+|+++|.+++ ++.++.|.|+++||||+++
T Consensus 72 ~ggGh~~~~~~~~~~~---~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~ 146 (503)
T 1zr6_A 72 KGGGHSYGSYGFGGED---GHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVL 146 (503)
T ss_dssp ESSCCCTTCTTTTSSS---SCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHH
T ss_pred ECCCcCCCCCcccCCC---CcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhc
Confidence 9999999876553 22 3499999999999999 888999999999999999998876 6888999999999999999
Q ss_pred CCCCCCCcccCCccccceeEEEEEecCCcEec-ccCCCcchHHHhhcCCCCCcEEEEEEEEEEeecCceEEEEEEEecc-
Q 009399 186 GGAYGSMMRKYGLGADNVLDARIVDANGKILD-REAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVFTVTKTL- 263 (535)
Q Consensus 186 ggg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dLf~a~rG~~~g~~GiVt~~~~k~~p~~~~~~~~~~~~~~- 263 (535)
|||+|+++++||+++|+|++++||++||++++ ...+|+|||||+|||+ |+|||||+++||++|.|+....+.+.+..
T Consensus 147 gGg~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~ 225 (503)
T 1zr6_A 147 GGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWN 225 (503)
T ss_dssp HCCCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCC
T ss_pred CCCCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCC
Confidence 99999999999999999999999999999997 5567899999999999 79999999999999999877666666654
Q ss_pred hhhHHHHHHHHHHHhhc-CCccceeEEEEeeccCCccCCCceEEEEEEEEEeCCHhHHHHHHhhhCccCCC--Cccccee
Q 009399 264 EQGATKILYRWQQVADK-LDEDLFIRVIIQAAEIPERKGQRTISTSYNALFLGGVDRLLQVMQESFPELGL--TQKDCIE 340 (535)
Q Consensus 264 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~--~~~~~~~ 340 (535)
.+.+.++++.|+++... +|+++...+.+... .+.+..+|+|+.++..+.+.+.+..++. ....+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----------~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~ 294 (503)
T 1zr6_A 226 RKQHVAGLKALQDWAQNTMPRELSMRLEINAN-----------ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVE 294 (503)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTBCCEEEEETT-----------EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhhcCChhHEEEEEEeCC-----------eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceee
Confidence 33456788899998876 88888776655421 3556678999998888777765433332 1233456
Q ss_pred cChHHHHHHHhCCCCCCCccccccCCCCCcccceeccccccCCCCHHHHHHHHHHHh-hCCC-----cEEEEeecCC---
Q 009399 341 TSWIKSVLYIAGYPSNTPPEVLLQGKSTFKNYFKAKSDFVREPIPETALEGLWKRFL-EEEG-----PLSIWNPYGG--- 411 (535)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fk~~s~~~~~~l~~~~l~~~~~~~~-~~~~-----~~i~~~~~GG--- 411 (535)
++|.+....+.. +..... ......+..++.++.+..+ ++++.++.+++.+. .... +.+.++++||
T Consensus 295 ~~~~~~~~~~~~---~~~~~~--~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ 368 (503)
T 1zr6_A 295 TDWYGQINTYLY---GADLNI--TYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNS 368 (503)
T ss_dssp ECHHHHHTTSCT---TCCSSC--SSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTC
T ss_pred CCHHHHHHHHcC---CCcccc--cCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchh
Confidence 778864422211 101000 0011122346677777766 88889999998887 5321 3577899999
Q ss_pred CCCCCCCCCCCCccCCCceeEEEEEeee-----CCChhhHHHHHHHHHHHHHhccccccCCCCcccccccCcccCCCCCC
Q 009399 412 MMSKIAESAIPFPHRNGTLFKIQYVTNW-----QDGDKNMAKHMEWIRRLYNYMAPYVSMLPRAAYVNYRDLDLGMNNKS 486 (535)
Q Consensus 412 ~i~~~~~~ataf~~R~~~~~~~~~~~~w-----~~~~~~~~~~~~wi~~~~~~~~~~~~~~~~g~YvNy~d~dl~~~~~~ 486 (535)
++++++.++++|+||+ .+|++++...| ++. +.+++..+|++++++.+.........|+|+||+|.+++
T Consensus 369 av~~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~----- 441 (503)
T 1zr6_A 369 ALAAVSNDETAYAHRD-QLWLWQFYDSIYDYENNTS-PYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT----- 441 (503)
T ss_dssp SGGGSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCT-TTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC-----
T ss_pred hhcCCCcccCCccccc-ceeEEEEEeeeccccCCCc-cchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc-----
Confidence 8888888999999998 58888876666 222 12233446666665555433211124799999999864
Q ss_pred CchhhhhhhhhhhhhhhhHHHHHHhHhhcCCCCCcccCCCCCCCCC
Q 009399 487 NTSFIQATAWGSRYFKDNFMRLVRVKTKVDPDNFFRHEQSIPPLPL 532 (535)
Q Consensus 487 ~~~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~~vF~~~q~i~~~~~ 532 (535)
.++|++.|||+||+||++||+||||+|||+++|+|+|...
T Consensus 442 ------~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~w 481 (503)
T 1zr6_A 442 ------KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIAY 481 (503)
T ss_dssp ------HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCCC
T ss_pred ------cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchhh
Confidence 2369999999999999999999999999999999998643
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=3e-64 Score=538.80 Aligned_cols=432 Identities=21% Similarity=0.323 Sum_probs=331.5
Q ss_pred ceeecCCCCChhhHhhhccccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCe
Q 009399 47 STFCDQTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPF 126 (535)
Q Consensus 47 ~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~~~ 126 (535)
..|++|+++.|+..+. +|+......|.+||.|+|++||+++|++|+++++|+.+||||||+.+.+...++
T Consensus 14 ~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~~g---- 83 (459)
T 2bvf_A 14 GEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATNDGG---- 83 (459)
T ss_dssp SEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCSSS----
T ss_pred ceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccCCe----
Confidence 4689999999998642 455555569999999999999999999999999999999999999887654444
Q ss_pred EEEEcCCCCCeEEcCCCCeEEEeCCCcHHHHHHHHHHcCCceeecCCCCCcccccccccCCCCCCCcccCCccccceeEE
Q 009399 127 IIVDLARLRAISVDIESNSAWVQTGATIGEVYYRIAEKSKIHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDA 206 (535)
Q Consensus 127 ivIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~s~~~G~~~d~v~~~ 206 (535)
++|||++||+|++|+++++|+||||+++.+|+++|.++| +.+++|.|+.+||||+++|||+|+++++||+++|+|+++
T Consensus 84 vvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~ 161 (459)
T 2bvf_A 84 IVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGA 161 (459)
T ss_dssp EEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEE
T ss_pred EEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEE
Confidence 999999999999999999999999999999999999985 788899999999999999999999999999999999999
Q ss_pred EEEecCCcEec-ccCCCcchHHHhhcCCCCCcEEEEEEEEEEeecCceEEEEEEEecchhhHH--HHHHHHHHHhhcCCc
Q 009399 207 RIVDANGKILD-REAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVFTVTKTLEQGAT--KILYRWQQVADKLDE 283 (535)
Q Consensus 207 ~vV~~~G~i~~-~~~~~~dLf~a~rG~~~g~~GiVt~~~~k~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 283 (535)
|||++||++++ ...+++||||++|||+ |+|||||+++||++|.|.......+.++..+ +. ++++.|+++....|+
T Consensus 162 ~vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 239 (459)
T 2bvf_A 162 TLVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPSV-SELAGLLTSLLDALNEMAD 239 (459)
T ss_dssp EEECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCCH-HHHHHHHHHHHHHHHHTTT
T ss_pred EEEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechHH-hhHHHHHHHHHHHHHhCcH
Confidence 99999999997 5567899999999988 8999999999999999766656666665432 34 788888888877777
Q ss_pred cceeEEEEeeccCCccCCCceEEEEEEEEEeCCHhHHHHHHhhhCccCC-CCcccceecChHHHHHHHh---CCCCCCCc
Q 009399 284 DLFIRVIIQAAEIPERKGQRTISTSYNALFLGGVDRLLQVMQESFPELG-LTQKDCIETSWIKSVLYIA---GYPSNTPP 359 (535)
Q Consensus 284 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 359 (535)
++...+..... ..+. ..+.+...|.|+.++..+.+.+. .+++ .....+..++|.+...... .++
T Consensus 240 ~~~~~~~~~~~----~~~~--~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 307 (459)
T 2bvf_A 240 HIYPSVFVGVD----ENRA--PSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNAEVGSFE----- 307 (459)
T ss_dssp TCCCEEEEEEC----TTCC--EEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHHHHSCCC-----
T ss_pred hhccccccCcc----cCCC--ceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhcccccccCC-----
Confidence 77443311111 1122 24455668899987777666653 3343 2234456678877443311 111
Q ss_pred cccccCCCCCccccee-ccccccCCCCHHHHHHHHHHHhhCC-Cc-EEEEeecCCCCCCCCCCCCCCccCCCceeEEEEE
Q 009399 360 EVLLQGKSTFKNYFKA-KSDFVREPIPETALEGLWKRFLEEE-GP-LSIWNPYGGMMSKIAESAIPFPHRNGTLFKIQYV 436 (535)
Q Consensus 360 ~~~~~~~~~~~~~fk~-~s~~~~~~l~~~~l~~~~~~~~~~~-~~-~i~~~~~GG~i~~~~~~ataf~~R~~~~~~~~~~ 436 (535)
... ..+.. ++.++.+.++.+.++.+++.+.+.+ .. .+.++.+||++.+ .+.++|+||+. .| +++.
T Consensus 308 -------~~~-~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~~-~~-~~~~ 375 (459)
T 2bvf_A 308 -------DGM-SNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRDA-MG-VLAL 375 (459)
T ss_dssp -------CSC-EEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCSS-CE-EEEE
T ss_pred -------CCC-cceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCCc-ce-EEEE
Confidence 011 12222 4555543345566666666665433 33 3445555887766 66789999994 67 8888
Q ss_pred eeeCCChhhHHHHHHHHHHHHHhccccccCCCCcccccccCcccCCCCCCCchhhhhhhhhhhhhhhh-HHHHHHhHhhc
Q 009399 437 TNWQDGDKNMAKHMEWIRRLYNYMAPYVSMLPRAAYVNYRDLDLGMNNKSNTSFIQATAWGSRYFKDN-FMRLVRVKTKV 515 (535)
Q Consensus 437 ~~w~~~~~~~~~~~~wi~~~~~~~~~~~~~~~~g~YvNy~d~dl~~~~~~~~~~~~~~~~~~~yyG~n-~~RL~~IK~ky 515 (535)
..|++..+.++.+.+|++.+++.+.++.....+|+|+||+|.+. .+|.+.|||+| |+||++||+||
T Consensus 376 ~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~-------------~~~~~~~yG~~n~~rL~~iK~ky 442 (459)
T 2bvf_A 376 AEWSGAAPGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVT-------------AEMVAEVYKPEVYSRLAAVKREY 442 (459)
T ss_dssp EEECTTSTTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC-------------HHHHHHHHCHHHHHHHHHHHHHH
T ss_pred EEeCCCccchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc-------------hHHHHHHhCcchHHHHHHHHHHh
Confidence 99954321345568999999999988742123589999999873 26999999986 99999999999
Q ss_pred CCCCCcccCCCCCC
Q 009399 516 DPDNFFRHEQSIPP 529 (535)
Q Consensus 516 DP~~vF~~~q~i~~ 529 (535)
||+|+|+++|+|+|
T Consensus 443 DP~~vF~~~~~I~p 456 (459)
T 2bvf_A 443 DPENRFRHNYNIDP 456 (459)
T ss_dssp CTTCCCCSSSCCCC
T ss_pred CcccccCCCCCCCC
Confidence 99999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=1.9e-40 Score=360.83 Aligned_cols=219 Identities=16% Similarity=0.207 Sum_probs=174.0
Q ss_pred CcccHHHHhccCCCCCCCCceeecCCCCChhhHhhhccccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHh--c-CCeE
Q 009399 28 VEDSFIHCLNSNSDLSVPFSTFCDQTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQ--L-GIHL 104 (535)
Q Consensus 28 ~~~~~~~cl~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~--~-~~~v 104 (535)
..+++.+||++... ...|.+ +...+.. +...|+......|.+||+|+|++||+++|++|++ + ++||
T Consensus 30 ~~~~~~~~l~~~~~----~~~v~~-~~~~~~~------~~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v 98 (534)
T 1w1o_A 30 RGRPWPASLAALAL----DGKLRT-DSNATAA------ASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTI 98 (534)
T ss_dssp ----------CTTT----TTCEEC-SHHHHHH------TSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCE
T ss_pred chHHHHHHHHhcCC----CceEec-CHHHHHH------HhccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceE
Confidence 56688899888432 123333 2222322 2345665556789999999999999999999998 6 9999
Q ss_pred EEEeCCCCCCCCccccCCCCCeEEEEcCCCCCe------EEcCCCCeEEEeCCCcHHHHHHHHHHcCCceeecC-CCCCc
Q 009399 105 RVRSGGHDYEGLSYVSEIETPFIIVDLARLRAI------SVDIESNSAWVQTGATIGEVYYRIAEKSKIHGFPA-GLCTS 177 (535)
Q Consensus 105 ~v~ggGh~~~g~~~~~~~~~~~ivIdl~~~~~i------~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~ 177 (535)
+++|+|||+.|.+.+.++ ++|||++||+| ++|+++++++||||+++.+|++++.++| +..+. +.+..
T Consensus 99 ~~~G~G~~~~g~~~~~~g----vvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~~ 172 (534)
T 1w1o_A 99 AFRGRGHSLMGQAFAPGG----VVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYLY 172 (534)
T ss_dssp EEESSCCCSSSTTCCTTS----EEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSCC
T ss_pred EEECCCCCCCCCcCCCCe----EEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCCC
Confidence 999999999988876655 99999999985 7888889999999999999999999986 44444 44578
Q ss_pred ccccccccCCCCCCCcccCCccccceeEEEEEecCCcEec-ccCCCcchHHHhhcCCCCCcEEEEEEEEEEeecCceEEE
Q 009399 178 LGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKILD-REAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTV 256 (535)
Q Consensus 178 vgigG~~~ggg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dLf~a~rG~~~g~~GiVt~~~~k~~p~~~~~~~ 256 (535)
++|||.+++||.|..+++||.++|+|++++||++||++++ ...+|+||||++|||+ |+|||||+++||++|.|+...+
T Consensus 173 ~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~ 251 (534)
T 1w1o_A 173 LTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARARW 251 (534)
T ss_dssp SBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEE
T ss_pred EEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEE
Confidence 8999999999999999999999999999999999999997 4557899999999998 8999999999999999987766
Q ss_pred EEEEecch
Q 009399 257 FTVTKTLE 264 (535)
Q Consensus 257 ~~~~~~~~ 264 (535)
+.+.+...
T Consensus 252 ~~~~~~~~ 259 (534)
T 1w1o_A 252 VRFVYTDF 259 (534)
T ss_dssp EEEEESCH
T ss_pred EEEEeCCH
Confidence 66766543
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=9e-34 Score=306.96 Aligned_cols=201 Identities=22% Similarity=0.291 Sum_probs=168.7
Q ss_pred cccCCCCCCCCceEEEEcCCHHHHHHHHHHHHh-cCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCCeEEcC----
Q 009399 67 NLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQ-LGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAISVDI---- 141 (535)
Q Consensus 67 n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~-~~~~v~v~ggGh~~~g~~~~~~~~~~~ivIdl~~~~~i~~d~---- 141 (535)
...|.......|.+||+|+|++||+++|++|++ +++||++||||||+.|.+.+.++ |+|||++||+|++|.
T Consensus 51 ~~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~g----vvidl~~m~~i~i~~~~~~ 126 (524)
T 2exr_A 51 GRDFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEGG----LVVDMSTTAENHFEVGYLS 126 (524)
T ss_dssp TCCTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTTS----EEEEGGGGTTSCEEEEECC
T ss_pred hccccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCCE----EEEECcCCCCcEEeecccC
Confidence 345655556789999999999999999999996 99999999999999988776554 999999999997776
Q ss_pred -CC--CeEEEeCCCcHHHHHHHHH-HcCCceeecC-CCCCcccccccccCCCCCCCcccCCccccceeEEEEEecCCcEe
Q 009399 142 -ES--NSAWVQTGATIGEVYYRIA-EKSKIHGFPA-GLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKIL 216 (535)
Q Consensus 142 -~~--~~v~v~aG~~~~~l~~~l~-~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~s~~~G~~~d~v~~~~vV~~~G~i~ 216 (535)
++ .+++||||+++.++++++. ++| +..+. +.++.++|||+++++|.|..+.+||.++|+|++++||++||+++
T Consensus 127 ~~~~~~~v~v~aGv~~~~l~~~~l~~~G--l~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~ 204 (524)
T 2exr_A 127 GGDATAFVDVSGGALWEDVLKRCVSEYG--LAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVV 204 (524)
T ss_dssp SSSSSEEEEEETTCBHHHHHHHHHHHHS--EECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEE
T ss_pred CCCCceEEEEeCCcCHHHHHHHHHHHcC--CCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEE
Confidence 55 7999999999999866554 886 44332 45567999999999999999999999999999999999999999
Q ss_pred c-ccCCCcchHHHhhcCCCCCcEEEEEEEEEEeecCceEEEEEEEecchhhHHHHHHHH
Q 009399 217 D-REAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVFTVTKTLEQGATKILYRW 274 (535)
Q Consensus 217 ~-~~~~~~dLf~a~rG~~~g~~GiVt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (535)
+ ...+++||||++||+. |+|||||+++||++|.|+...++.+.|...+++.+.+..+
T Consensus 205 ~~~~~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l 262 (524)
T 2exr_A 205 TCSEIENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWL 262 (524)
T ss_dssp EEESSSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHH
T ss_pred EECCCCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHH
Confidence 6 4457899999999998 8999999999999999997777777776544444444333
No 13
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=2.6e-34 Score=319.17 Aligned_cols=204 Identities=22% Similarity=0.218 Sum_probs=176.9
Q ss_pred CCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccC-CCCCeEEEEcCCCCCe-EEcCCCCeEE
Q 009399 70 YLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSE-IETPFIIVDLARLRAI-SVDIESNSAW 147 (535)
Q Consensus 70 ~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~-~~~~~ivIdl~~~~~i-~~d~~~~~v~ 147 (535)
|.......|.+||+|+|+|||+++|++|+++++||+++|||||+.|...+.. ...++|+|||++||+| +||+++++++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 4444556999999999999999999999999999999999999886655432 1125699999999998 9999999999
Q ss_pred EeCCCcHHHHHHHHHHcCCceeecCCCCCcccccccccCCCCCCCcccCCccccceeEEEEEecCCcEec-----ccCCC
Q 009399 148 VQTGATIGEVYYRIAEKSKIHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKILD-----REAMG 222 (535)
Q Consensus 148 v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~-----~~~~~ 222 (535)
||||+++.+|.++|.++|+.+.+.+++...++|||++++++.|..+.+||.+.|+|+++|||++||++++ ....+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999986555556888889999999999999999999999999999999999999985 34568
Q ss_pred cchHHHhhcCCCCCcEEEEEEEEEEeecCceEEEEEEEecchhhHHHHHHHH
Q 009399 223 EDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVFTVTKTLEQGATKILYRW 274 (535)
Q Consensus 223 ~dLf~a~rG~~~g~~GiVt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (535)
+||+|+++|+. |+|||||+++||++|.|+....+.+.|+..+++.+++..+
T Consensus 358 yDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i 408 (658)
T 4bby_A 358 PDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREI 408 (658)
T ss_dssp SCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred cCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHH
Confidence 99999999998 8999999999999999998877777776555455555444
No 14
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=1.2e-31 Score=286.61 Aligned_cols=198 Identities=18% Similarity=0.241 Sum_probs=166.5
Q ss_pred ccCCCCCCCCceEEEEcCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCCe-EEcCCCC
Q 009399 68 LRYLTPSMPKPEFIFTPLYESHVQAAVICSKQL--GIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAI-SVDIESN 144 (535)
Q Consensus 68 ~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~--~~~v~v~ggGh~~~g~~~~~~~~~~~ivIdl~~~~~i-~~d~~~~ 144 (535)
.+|.. ....|.+|+.|+|++||+++|++|+++ ++|+.++|+|||+.+.+...++ ++|||++||+| ++|++++
T Consensus 34 ~~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~~g----vvIdl~~l~~i~~~d~~~~ 108 (481)
T 4feh_A 34 TGWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNGGG----LVIDMTPLNTIHSIDADTK 108 (481)
T ss_dssp CCTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCTTS----EEEECTTCCCEEEEETTTT
T ss_pred ecccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCcCe----EEEECccCCCceEEcCCCC
Confidence 46754 478999999999999999999999999 7999999999999766554444 99999999998 9999999
Q ss_pred eEEEeCCCcHHHHHHHHHHcCCceeecC-CCCCcccccccccCCCCCCCcccCCccccceeEEEEEecCCcEec-ccC-C
Q 009399 145 SAWVQTGATIGEVYYRIAEKSKIHGFPA-GLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKILD-REA-M 221 (535)
Q Consensus 145 ~v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~-~~~-~ 221 (535)
+|+||||+++.+|.++|.++| +.++. +....++|||.+++|++|..++.||.++|+|+++++|++||++++ +.. +
T Consensus 109 ~v~v~aGv~l~~L~~~l~~~G--l~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~ 186 (481)
T 4feh_A 109 LVDIDAGVNLDQLMKAALPFG--LWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGE 186 (481)
T ss_dssp EEEEETTCBHHHHHHHHGGGT--EECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSST
T ss_pred EEEEcCCccHHHHHHHHHHcC--CEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCC
Confidence 999999999999999999997 44443 333578999999999999999999999999999999999999997 444 7
Q ss_pred CcchHHHhhcCCCCCcEEEEEEEEEEeecCceEEEE-EEEecchhhHHHHHHHHHH
Q 009399 222 GEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVF-TVTKTLEQGATKILYRWQQ 276 (535)
Q Consensus 222 ~~dLf~a~rG~~~g~~GiVt~~~~k~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 276 (535)
++||||++|||. |+|||||+++||++|.|+..... ...+ ....++++.+.+
T Consensus 187 ~~dLf~a~rgs~-G~~GIIt~~tl~l~p~~~~~~~~~~~~~---~~l~~~~~~~~~ 238 (481)
T 4feh_A 187 DAELFWATVGGN-GLTGIIMRATIEMTPTSTAYFIADGDVT---ASLDETIALHSD 238 (481)
T ss_dssp THHHHHHHTTCT-TTTCEEEEEEEECEECSCSEEEEEEEEC---SSHHHHHHHHSS
T ss_pred ChHHHHHhhccC-CCceEEEEEEEEEEeCCccEEEEEEEeC---CCHHHHHHHHHH
Confidence 899999999998 89999999999999988644332 2222 224455555543
No 15
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=9e-33 Score=295.18 Aligned_cols=206 Identities=24% Similarity=0.305 Sum_probs=177.9
Q ss_pred cccCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCCe-EEcCCCCe
Q 009399 67 NLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAI-SVDIESNS 145 (535)
Q Consensus 67 n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~~~ivIdl~~~~~i-~~d~~~~~ 145 (535)
+..|+......|.+||+|+|++||+++|++|+++++|++++|||||+.|.+.+.. ++++|||++||+| ++|+++.+
T Consensus 41 ~~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~---ggvvIdl~~m~~i~~id~~~~~ 117 (476)
T 3pm9_A 41 ITEERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN---GEVVISLKRMDKIREIDTSSNT 117 (476)
T ss_dssp HBCTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS---SCEEEECTTCCCEEEEETTTTE
T ss_pred hcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC---CcEEEEeeCCCceEEEcCCCCe
Confidence 3456655567899999999999999999999999999999999999998877644 3599999999998 89999999
Q ss_pred EEEeCCCcHHHHHHHHHHcCCceeecCCCCCcccccccccCCCCCCCcccCCccccceeEEEEEecCCcEec------cc
Q 009399 146 AWVQTGATIGEVYYRIAEKSKIHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKILD------RE 219 (535)
Q Consensus 146 v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~------~~ 219 (535)
++||||+++.+|+++|.++|+.+.+.++++..++|||++.+++.|..+.+||.++|+|++++||++||++++ ++
T Consensus 118 v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~ 197 (476)
T 3pm9_A 118 ITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKD 197 (476)
T ss_dssp EEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCC
T ss_pred EEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCC
Confidence 999999999999999999974333345777789999999999999999999999999999999999999985 23
Q ss_pred CCCcchHHHhhcCCCCCcEEEEEEEEEEeecCceEEEEEEEecchhhHHHHHHHHHH
Q 009399 220 AMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVFTVTKTLEQGATKILYRWQQ 276 (535)
Q Consensus 220 ~~~~dLf~a~rG~~~g~~GiVt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (535)
..++||+|+++|+. |+|||||+++||++|.|+....+.+.++..+++.+++..+++
T Consensus 198 ~~g~dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 198 NTGYDLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CSSCCCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 45789999999988 899999999999999998777777777655555566666654
No 16
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.98 E-value=4.6e-32 Score=296.08 Aligned_cols=200 Identities=21% Similarity=0.240 Sum_probs=167.6
Q ss_pred CCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCCe-EEcCCCCeEEEeCCCc
Q 009399 75 MPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAI-SVDIESNSAWVQTGAT 153 (535)
Q Consensus 75 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~~~ivIdl~~~~~i-~~d~~~~~v~v~aG~~ 153 (535)
...|.+||+|+|++||+++|++|+++++||+++|||||+.|.+.+..+.+++|+|||++||+| ++|+++.+++||||++
T Consensus 135 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~ 214 (584)
T 2uuu_A 135 KNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIM 214 (584)
T ss_dssp CCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCB
T ss_pred CCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCc
Confidence 458999999999999999999999999999999999999877765422124699999999998 8999999999999999
Q ss_pred HHHHHHHHHHcCCceeecCCCCCcccccccccCCCCCCCcccCCccccceeEEEEEecCCcEec----ccCCCcchHHHh
Q 009399 154 IGEVYYRIAEKSKIHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKILD----REAMGEDLFWAI 229 (535)
Q Consensus 154 ~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~----~~~~~~dLf~a~ 229 (535)
+.+|+++|.++|+.+...+++...++|||++++|++|..+.+||.++|+|++++||++||++++ ++..++||+|++
T Consensus 215 ~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~~ 294 (584)
T 2uuu_A 215 GPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHII 294 (584)
T ss_dssp HHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHHH
T ss_pred HHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhhh
Confidence 9999999999974332222334568999999999999999999999999999999999999886 345789999999
Q ss_pred hcCCCCCcEEEEEEEEEEeecCceEEEEEEEecchhhHHHHHHHHH
Q 009399 230 RGGGGASFGIILSWKIKLVPVPETVTVFTVTKTLEQGATKILYRWQ 275 (535)
Q Consensus 230 rG~~~g~~GiVt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (535)
+|+. |+|||||+++||++|.|+....+.+.++..+++.+++..+.
T Consensus 295 ~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 339 (584)
T 2uuu_A 295 LGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIR 339 (584)
T ss_dssp TTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred ccCC-CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHH
Confidence 9998 89999999999999999877677777764444444444443
No 17
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.97 E-value=8.3e-30 Score=276.27 Aligned_cols=198 Identities=23% Similarity=0.269 Sum_probs=165.0
Q ss_pred CCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCC-CCccccCCCCCeEEEEcCCCCCe-EEcCCCCeEEEeCCC
Q 009399 75 MPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYE-GLSYVSEIETPFIIVDLARLRAI-SVDIESNSAWVQTGA 152 (535)
Q Consensus 75 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~-g~~~~~~~~~~~ivIdl~~~~~i-~~d~~~~~v~v~aG~ 152 (535)
...|.+||+|+|++||+++|++|+++++||+++|+|||+. |.+.+... ++|+|||++||+| ++|+++++++||||+
T Consensus 54 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~--~gvvidl~~m~~i~~id~~~~~v~v~aGv 131 (520)
T 1wvf_A 54 AHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQR--GQVILDLKKMNKIIKIDPEMCYALVEPGV 131 (520)
T ss_dssp GGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSST--TCEEEECTTCCCEEEEETTTTEEEECTTC
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCC--CeEEEECCCCCceEEECCCCCEEEECCCC
Confidence 4589999999999999999999999999999999999986 65443111 3499999999999 999999999999999
Q ss_pred cHHHHHHHHHHcCCceeecCC---CCCcccccccccCCCCCCCcccCCccccceeEEEEEecCCcEecc---cCCCcchH
Q 009399 153 TIGEVYYRIAEKSKIHGFPAG---LCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKILDR---EAMGEDLF 226 (535)
Q Consensus 153 ~~~~l~~~l~~~g~~l~~~~g---~~~~vgigG~~~ggg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~~---~~~~~dLf 226 (535)
++.+|+++|.++|+. ++.+ ....+||||.+++||.|.. +||.++|+|++++||++||++++. ..+++|+|
T Consensus 132 ~~~~l~~~l~~~Gl~--~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~ 207 (520)
T 1wvf_A 132 TFGQMYDYIQENNLP--VMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTW 207 (520)
T ss_dssp CHHHHHHHHHHTTCS--EECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCT
T ss_pred CHHHHHHHHHHcCCc--ccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhH
Confidence 999999999999754 4433 3337899999988888876 999999999999999999999963 23678988
Q ss_pred HHhhcCCC---------CCcEEEEEEEEEEeecCceEEEEEEEecchhhHHHHHHHHHHHh
Q 009399 227 WAIRGGGG---------ASFGIILSWKIKLVPVPETVTVFTVTKTLEQGATKILYRWQQVA 278 (535)
Q Consensus 227 ~a~rG~~~---------g~~GiVt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (535)
++.+|+.+ ++|||||+++||++|.|+....+.+.|+..+++.++++.++++.
T Consensus 208 ~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 208 QIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp TTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred hhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 87777652 48999999999999999987777777776555555565666554
No 18
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=1.9e-29 Score=275.11 Aligned_cols=199 Identities=15% Similarity=0.152 Sum_probs=164.0
Q ss_pred ceeecC-CCCChhhHhhhccccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCC-CC
Q 009399 47 STFCDQ-TNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEI-ET 124 (535)
Q Consensus 47 ~~~~~~-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~-~~ 124 (535)
..+++| +++.|+... .+|+.+....|.+|+.|+|++||+++|++|+++++||+++|+|||+.+.+...+. ..
T Consensus 10 ~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~ 83 (561)
T 2i0k_A 10 TPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVE 83 (561)
T ss_dssp CCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCT
T ss_pred CceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCC
Confidence 346667 999998742 3677666779999999999999999999999999999999999998764432210 01
Q ss_pred CeEEEEc-CCCCCeEEcC--CCCeEEEeCCCcHHHHHHHHHHcCCceeecC-CCCCcccccccccCCCCCCC--------
Q 009399 125 PFIIVDL-ARLRAISVDI--ESNSAWVQTGATIGEVYYRIAEKSKIHGFPA-GLCTSLGVGGHITGGAYGSM-------- 192 (535)
Q Consensus 125 ~~ivIdl-~~~~~i~~d~--~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~-------- 192 (535)
++++||| ++||+|++|+ ++++|+||||+++.+|.++|.++| +.++. +..+.++|||.+.+|++|..
T Consensus 84 ~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~G--l~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~ 161 (561)
T 2i0k_A 84 KVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHD--LGWANLPAPGVLSIGGALAVNAHGAALPAVGQTT 161 (561)
T ss_dssp TEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTT--EECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCC
T ss_pred CeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcC--CcccccCCCCCcccCCCcccCCcccccccCCccc
Confidence 3599999 8999999998 789999999999999999999997 44454 33366889999888777765
Q ss_pred --cccCCccccceeEEEEEecCCc---EecccCCCcchHHHhhcCCCCCcEEEEEEEEEEeecCceEEE
Q 009399 193 --MRKYGLGADNVLDARIVDANGK---ILDREAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTV 256 (535)
Q Consensus 193 --s~~~G~~~d~v~~~~vV~~~G~---i~~~~~~~~dLf~a~rG~~~g~~GiVt~~~~k~~p~~~~~~~ 256 (535)
+.+||.++|+|++++||++||+ +++...+++||+|+++|.| . ||||+++||++|.++....
T Consensus 162 ~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G--~-giIt~~tl~l~p~~~~~~~ 227 (561)
T 2i0k_A 162 LPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG--R-CFLTSVTMQAGPNFRQRCQ 227 (561)
T ss_dssp CTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT--S-SCEEEEEEECEECCEEEEE
T ss_pred ccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC--C-EEEEEEEEEEEECCceEEE
Confidence 7789999999999999999999 6654445899999999654 4 8999999999999875444
No 19
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=3.3e-28 Score=265.52 Aligned_cols=199 Identities=16% Similarity=0.124 Sum_probs=162.7
Q ss_pred CCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCC-CCccc-cCCCCCeEEEEc-CCCCCe-EEcCCCCeEEEeC
Q 009399 75 MPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYE-GLSYV-SEIETPFIIVDL-ARLRAI-SVDIESNSAWVQT 150 (535)
Q Consensus 75 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~-g~~~~-~~~~~~~ivIdl-~~~~~i-~~d~~~~~v~v~a 150 (535)
...|.+||+|+|++||+++|++|+++++||+++|+|||+. |...+ .. ++|+||| ++||+| ++|+++++|+|||
T Consensus 68 ~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~---~gvvidl~~~mn~il~id~~~~~v~v~a 144 (560)
T 1e8g_A 68 YFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVS---GSVVLDMGKNMNRVLEVNVEGAYCVVEP 144 (560)
T ss_dssp SSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSST---TCEEEECTTTCCCEEEEETTTTEEEECT
T ss_pred ccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcC---CEEEEEchHhcCCeEEEcCCCCEEEEeC
Confidence 4589999999999999999999999999999999999986 65543 22 2499999 999998 9999999999999
Q ss_pred CCcHHHHHHHHHHcCCc--eeecCCCCCcccccccccCCCCCCCcccCCccccceeEEEEEecCCcEeccc---CCCc--
Q 009399 151 GATIGEVYYRIAEKSKI--HGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKILDRE---AMGE-- 223 (535)
Q Consensus 151 G~~~~~l~~~l~~~g~~--l~~~~g~~~~vgigG~~~ggg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~~~---~~~~-- 223 (535)
|+++.+|.++|.++|+. +.+.++....+||||.++++|.|.. +||..+|+|++++||++||++++.. ..++
T Consensus 145 Gv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~ 222 (560)
T 1e8g_A 145 GVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKR 222 (560)
T ss_dssp TCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCC
T ss_pred CCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccc
Confidence 99999999999999865 4433444446889999888888865 9999999999999999999999632 2231
Q ss_pred -------------chHHHhhcC----------CCCCcEEEEEEEEEEeecCceEEEEEEEecchhhHHHHHHHHHHHh
Q 009399 224 -------------DLFWAIRGG----------GGASFGIILSWKIKLVPVPETVTVFTVTKTLEQGATKILYRWQQVA 278 (535)
Q Consensus 224 -------------dLf~a~rG~----------~~g~~GiVt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (535)
+++|+++++ .+|+|||||+++||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 223 ~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 223 PETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp GGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 556666543 2379999999999999999987777788876555666666666654
No 20
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=5.8e-29 Score=266.01 Aligned_cols=193 Identities=15% Similarity=0.169 Sum_probs=155.9
Q ss_pred cCCCCChhhHhhhccccccCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccC-CCCCeEEE
Q 009399 51 DQTNSSFGSILQSSAQNLRYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSE-IETPFIIV 129 (535)
Q Consensus 51 ~~~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~-~~~~~ivI 129 (535)
..+-+.|.... .+|+......|.+|++|+|++||+++|++|+++++||+++|+|||+.+.....+ ..+++|+|
T Consensus 9 p~~i~~y~~~~------~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvI 82 (540)
T 3js8_A 9 PAEIPLYKQSF------KNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLL 82 (540)
T ss_dssp CTTSCCEEEEE------ECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEE
T ss_pred Ccccchhccee------eccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEE
Confidence 33455565432 258877778999999999999999999999999999999999999863322111 01146999
Q ss_pred EcC-CCCCeEEcCC--CCeEEEeCCCcHHHHHHHHHHcCCceeecC-CCCCcccccccccCCCCCCC----------ccc
Q 009399 130 DLA-RLRAISVDIE--SNSAWVQTGATIGEVYYRIAEKSKIHGFPA-GLCTSLGVGGHITGGAYGSM----------MRK 195 (535)
Q Consensus 130 dl~-~~~~i~~d~~--~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~----------s~~ 195 (535)
||+ +||+|++|++ .++|+||||+++.+|+++|.++| +.++. +..+.++|||.+++|++|.. +++
T Consensus 83 dls~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~G--L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~ 160 (540)
T 3js8_A 83 DTTRYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAG--LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGAS 160 (540)
T ss_dssp ETTTTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTT--EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCC
T ss_pred ECcCcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcC--CEEEecCCCCCeEEcccccCCCCcccccccccccccccc
Confidence 995 7999999985 57999999999999999999996 55553 34567999999999999886 689
Q ss_pred CCccccceeEEEEEecCCc-----EecccCCCcchHHHhhcCCCCCcEEEEEEEEEEeecCceE
Q 009399 196 YGLGADNVLDARIVDANGK-----ILDREAMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETV 254 (535)
Q Consensus 196 ~G~~~d~v~~~~vV~~~G~-----i~~~~~~~~dLf~a~rG~~~g~~GiVt~~~~k~~p~~~~~ 254 (535)
||.++|+|++++||++||+ +++.+.+++||| ++|+|. |. ||||+++||++|.++..
T Consensus 161 ~G~~~D~V~~levV~adG~~~~~~i~~~s~~~~DL~-a~r~G~-G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 161 YGSISNLVLSLTAVVYDKASGAYALRKFARNDPQIA-PLLAHV-GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp SSCGGGGEEEEEEEEEETTTTEEEEEEEETTSGGGH-HHHTCT-TS-SCEEEEEEEEEECCEEE
T ss_pred cccHHHhEEEEEEEcCCCCCceeeEEEeCCCChhHH-HHHhcC-CC-eEEEEEEEEEEECCceE
Confidence 9999999999999999998 665444789985 556565 56 69999999999998744
No 21
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.96 E-value=1.2e-28 Score=260.58 Aligned_cols=176 Identities=19% Similarity=0.259 Sum_probs=155.0
Q ss_pred cCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCCe-EEcCCCCeEE
Q 009399 69 RYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAI-SVDIESNSAW 147 (535)
Q Consensus 69 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~~~ivIdl~~~~~i-~~d~~~~~v~ 147 (535)
+|+......|.+|++|+|++||+++|++| +|++++|+|||+.+.+.+.. ++++|||++||+| ++|+++++|+
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~~---~g~vi~l~~l~~i~~~d~~~~~v~ 84 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPGD---GGVLLSLAGLPSVVDVDTAARTVR 84 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCCT---TCEEECSTTSCCCEEEETTTTEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCCC---CcEEEEhhhCCCcEEEcCCCCEEE
Confidence 57766677999999999999999999998 89999999999988776312 3499999999997 9999999999
Q ss_pred EeCCCcHHHHHHHHHHcCCceeecC-CCCCcccccccccCCCCCCCcccCCccccceeEEEEEecCCcEec-ccCCCcch
Q 009399 148 VQTGATIGEVYYRIAEKSKIHGFPA-GLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGKILD-REAMGEDL 225 (535)
Q Consensus 148 v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~s~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dL 225 (535)
||||+++.+|.++|.++| +.++. +.++.++|||.+++|++|.. .+||.++|+|+++++|++||++++ ...+++
T Consensus 85 v~aG~~l~~l~~~l~~~G--l~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~-- 159 (422)
T 2vfr_A 85 VGGGVRYAELARVVHARG--LALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER-- 159 (422)
T ss_dssp EETTCBHHHHHHHHHHTT--EECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--
T ss_pred EcCCCCHHHHHHHHHHcC--CcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--
Confidence 999999999999999997 45554 88888999999999999976 799999999999999999999997 334455
Q ss_pred HHHhhcCCCCCcEEEEEEEEEEeecCceEEEE
Q 009399 226 FWAIRGGGGASFGIILSWKIKLVPVPETVTVF 257 (535)
Q Consensus 226 f~a~rG~~~g~~GiVt~~~~k~~p~~~~~~~~ 257 (535)
||+++|+. |++||||+++||++|.|+.....
T Consensus 160 f~~~~g~~-G~lGvit~~~l~l~p~~~~~~~~ 190 (422)
T 2vfr_A 160 FGGAVTSL-GALGVVTSLTLDLEPAYEMEQHV 190 (422)
T ss_dssp GGGTSSCT-TTTCEEEEEEEECEECCEEEEEE
T ss_pred cceEEecC-CCCEEEEEEEEEEEecCceEEEE
Confidence 99999988 89999999999999998865443
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.96 E-value=7.7e-29 Score=268.93 Aligned_cols=196 Identities=12% Similarity=0.101 Sum_probs=164.1
Q ss_pred CCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCC--CCCeEEEEcCCCCCe-EEcCCCCeEEEeCC
Q 009399 75 MPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEI--ETPFIIVDLARLRAI-SVDIESNSAWVQTG 151 (535)
Q Consensus 75 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~--~~~~ivIdl~~~~~i-~~d~~~~~v~v~aG 151 (535)
...|.+||+|+|++||+++|++|+++++||+++||||++.|.+.+.++ +.++++|||++||+| ++|+ +++|+||||
T Consensus 43 ~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~aG 121 (571)
T 1f0x_A 43 QGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYPG 121 (571)
T ss_dssp BBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECTT
T ss_pred CCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcCC
Confidence 468999999999999999999999999999999999999888776541 002599999999998 7984 689999999
Q ss_pred CcHHHHHHHHHHcCCceeecC---CCCCcccccccccCCCCCCCcccCCcccc----------------ceeEEEEEecC
Q 009399 152 ATIGEVYYRIAEKSKIHGFPA---GLCTSLGVGGHITGGAYGSMMRKYGLGAD----------------NVLDARIVDAN 212 (535)
Q Consensus 152 ~~~~~l~~~l~~~g~~l~~~~---g~~~~vgigG~~~ggg~g~~s~~~G~~~d----------------~v~~~~vV~~~ 212 (535)
+++.+|.++|.++| +.++. ++|..++|||.++++++|..+.+||.++| +|++++||++|
T Consensus 122 v~l~~L~~~l~~~G--l~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~d 199 (571)
T 1f0x_A 122 TTLYSLEKALKPLG--REPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETP 199 (571)
T ss_dssp CBHHHHHHHHGGGT--EECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSH
T ss_pred cCHHHHHHHHHhcC--ccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCC
Confidence 99999999999997 43432 34456789999999999999999999999 99999999999
Q ss_pred CcEecc------------------cCCCc-----------------chHHHh--hcCCCCCcEEEEEEEEEEeecCceEE
Q 009399 213 GKILDR------------------EAMGE-----------------DLFWAI--RGGGGASFGIILSWKIKLVPVPETVT 255 (535)
Q Consensus 213 G~i~~~------------------~~~~~-----------------dLf~a~--rG~~~g~~GiVt~~~~k~~p~~~~~~ 255 (535)
|++++. +..++ ||+|++ +|+. |+||| |+++||++|.|+...
T Consensus 200 G~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~~ 277 (571)
T 1f0x_A 200 EQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQQ 277 (571)
T ss_dssp HHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEECCSSCE
T ss_pred CcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEecCCeEE
Confidence 999851 12234 998888 9988 89999 999999999998777
Q ss_pred EEEEEecchhhHHHHHHHHH
Q 009399 256 VFTVTKTLEQGATKILYRWQ 275 (535)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~ 275 (535)
.+.+.++..+++.+++..+.
T Consensus 278 ~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 278 VFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEEEESCHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHH
Confidence 77777765554555555554
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.91 E-value=7.5e-25 Score=221.79 Aligned_cols=163 Identities=19% Similarity=0.137 Sum_probs=130.3
Q ss_pred CCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCCeEEcCCCCeEEEeCCCcH
Q 009399 75 MPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATI 154 (535)
Q Consensus 75 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~~~ivIdl~~~~~i~~d~~~~~v~v~aG~~~ 154 (535)
...|.++|.|+|++||+++|++|+++++|+.++|+|||+.+.+.+.+ +++|||++|++|++| +.+++|+||++|
T Consensus 52 gg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~~----gvvI~l~~~~~I~~d--~~~v~v~aG~~~ 125 (322)
T 3tx1_A 52 GGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIR----GVILHLDLLQTIERN--NTQIVAMSGAKL 125 (322)
T ss_dssp CCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCEE----EEEEECTTCCCEEEE--TTEEEEETTSBH
T ss_pred CceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCCC----eEEEECCCCCcEEEC--CCEEEEecCcCH
Confidence 45899999999999999999999999999999999999875543333 499999999999875 459999999999
Q ss_pred HHHHHHHHHcCC-ceeecCCCCCcccccccccCCCCCCCcccC-CccccceeEEEEEecCCcEecccCCCcchHHHhhcC
Q 009399 155 GEVYYRIAEKSK-IHGFPAGLCTSLGVGGHITGGAYGSMMRKY-GLGADNVLDARIVDANGKILDREAMGEDLFWAIRGG 232 (535)
Q Consensus 155 ~~l~~~l~~~g~-~l~~~~g~~~~vgigG~~~ggg~g~~s~~~-G~~~d~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~ 232 (535)
.+|++++.++|+ ++.+..|.+. +|||.+..++.| | |.++|+|+++++|++||++++.. .+|++|+||++
T Consensus 126 ~~l~~~l~~~Gl~Gle~~~giPg--TVGGav~~NaGg-----yGg~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~s 196 (322)
T 3tx1_A 126 IDTAKFALNESLSGLEFACGIPG--SIGGALHMNAGA-----YGGEISDVLEAATVLTQTGELKKLK--RSELKAAYRFS 196 (322)
T ss_dssp HHHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-C
T ss_pred HHHHHHHHHcCCcccccCCCCcc--hhHHHHHhCccC-----cccchHhhEEEEEEEcCCCCEEEec--hHHcCcchhhc
Confidence 999999999974 2334555543 345555433222 4 78999999999999999999743 36999999987
Q ss_pred CCC-CcEEEEEEEEEEeecCc
Q 009399 233 GGA-SFGIILSWKIKLVPVPE 252 (535)
Q Consensus 233 ~~g-~~GiVt~~~~k~~p~~~ 252 (535)
..+ .+||||+++||++|.|+
T Consensus 197 ~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 197 TIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp TTTGGGCEEEEEEEECEECCH
T ss_pred ccCCCCEEEEEEEEEEEeCCH
Confidence 643 57899999999999874
No 24
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.91 E-value=2e-24 Score=220.92 Aligned_cols=164 Identities=13% Similarity=0.025 Sum_probs=143.6
Q ss_pred CCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCCeEEcC--CCCeEEEeCCC
Q 009399 75 MPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAISVDI--ESNSAWVQTGA 152 (535)
Q Consensus 75 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~~~ivIdl~~~~~i~~d~--~~~~v~v~aG~ 152 (535)
...|.++|.|+|++||+++|++|+++++|+.++|+|||+.+.+. .++ +||+++ |++|+++. ++.+++|+||+
T Consensus 28 gg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~G----vVI~l~-~~~i~v~~~~~~~~v~v~AG~ 101 (357)
T 3i99_A 28 EQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YTG----MIVVNR-LNGIEHQQDDDYHRLHVAGGE 101 (357)
T ss_dssp SCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EEE----EEEEEC-CCCEEEEECSSEEEEEEETTS
T ss_pred CccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CCe----EEEEcC-CCceEEeccCCceEEEEeCCC
Confidence 35789999999999999999999999999999999999876554 343 999998 99998753 45689999999
Q ss_pred cHHHHHHHHHHcCCceeecCCCCCcccccccccCCCCCCCcccCCc-cccceeEEEEEec-CCcEecccCCCcchHHHhh
Q 009399 153 TIGEVYYRIAEKSKIHGFPAGLCTSLGVGGHITGGAYGSMMRKYGL-GADNVLDARIVDA-NGKILDREAMGEDLFWAIR 230 (535)
Q Consensus 153 ~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~s~~~G~-~~d~v~~~~vV~~-~G~i~~~~~~~~dLf~a~r 230 (535)
+|.+|.+++.++|+ .|.++.+||+|. .||+.+++.+.||. ++|+|+++++|++ +|++++.. +.||+|+||
T Consensus 102 ~~~~l~~~a~~~Gl-----~GlE~l~gIPGt-VGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~YR 173 (357)
T 3i99_A 102 DWPSLVSWCVEQGI-----GGLENLALIPGC-AGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGYR 173 (357)
T ss_dssp BHHHHHHHHHHTTC-----TTCGGGTTCCSB-GGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBTT
T ss_pred cHHHHHHHHHHcCC-----cCccccCCCCch-hHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCcccc
Confidence 99999999999972 588888999985 88889999999997 8999999999999 99999743 469999999
Q ss_pred cCCC----CCcEEEEEEEEEEeecCc
Q 009399 231 GGGG----ASFGIILSWKIKLVPVPE 252 (535)
Q Consensus 231 G~~~----g~~GiVt~~~~k~~p~~~ 252 (535)
++.. +++||||+++||++|.++
T Consensus 174 ~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 174 DSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp BCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cccCCCccCCCEEEEEEEEEEEeCCc
Confidence 8753 379999999999999764
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.90 E-value=3.5e-24 Score=218.16 Aligned_cols=159 Identities=22% Similarity=0.208 Sum_probs=130.6
Q ss_pred CCCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCCeEEcCCCCeEEEeCCCcH
Q 009399 75 MPKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATI 154 (535)
Q Consensus 75 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~~~ivIdl~~~~~i~~d~~~~~v~v~aG~~~ 154 (535)
...|.+|++|+|++||+++|++|+++++|++++|||||+.+.+.+.++ ++|||++||+|++| +.+++||||+++
T Consensus 46 ~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~g----vvI~l~~m~~i~id--~~~v~v~aGv~~ 119 (326)
T 1hsk_A 46 GGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRG----IVISLLSLDHIEVS--DDAIIAGSGAAI 119 (326)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEEE----EEEECTTCCCEEEE--TTEEEEETTSBH
T ss_pred CCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCCe----EEEEeCCCCceEEc--CCEEEEeCCCcH
Confidence 457999999999999999999999999999999999998765544333 99999999999887 369999999999
Q ss_pred HHHHHHHHHcCC-ceeecCCCCCcccccccccCCCCCCCcccCC-ccccceeEEEEEecCCcEecccCCCcchHHHhhcC
Q 009399 155 GEVYYRIAEKSK-IHGFPAGLCTSLGVGGHITGGAYGSMMRKYG-LGADNVLDARIVDANGKILDREAMGEDLFWAIRGG 232 (535)
Q Consensus 155 ~~l~~~l~~~g~-~l~~~~g~~~~vgigG~~~ggg~g~~s~~~G-~~~d~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~ 232 (535)
.+|.+++.++|+ ++.+..+... +|||.+..++.| || .++|+|+++++|++||++++... .|++|++|..
T Consensus 120 ~~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~~ 190 (326)
T 1hsk_A 120 IDVSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRNS 190 (326)
T ss_dssp HHHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTBC
T ss_pred HHHHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCcccc
Confidence 999999999974 2223333322 577776665544 88 99999999999999999997432 3888999974
Q ss_pred C---CCCcEEEEEEEEEEeec
Q 009399 233 G---GASFGIILSWKIKLVPV 250 (535)
Q Consensus 233 ~---~g~~GiVt~~~~k~~p~ 250 (535)
. .| ||||+++||++|.
T Consensus 191 ~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 191 IIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp HHHHTT--CEEEEEEEECEEC
T ss_pred ccCCCC--EEEEEEEEEEEcC
Confidence 2 13 9999999999997
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.89 E-value=5.4e-23 Score=209.67 Aligned_cols=163 Identities=13% Similarity=0.046 Sum_probs=141.2
Q ss_pred CCceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCCeE-EcCCC-CeEEEeCCCc
Q 009399 76 PKPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAIS-VDIES-NSAWVQTGAT 153 (535)
Q Consensus 76 ~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~~~ivIdl~~~~~i~-~d~~~-~~v~v~aG~~ 153 (535)
..|.+++.|+|++||+++|++|+++++|+.++|+|||+.+.+. .+ ++||+|+ |++|. ++.++ .+++|+||++
T Consensus 13 g~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~----GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~ 86 (340)
T 1uxy_A 13 HNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR----GTVIINR-IKGIEIHDEPDAWYLHVGAGEN 86 (340)
T ss_dssp CBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE----EEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred ccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC----eEEEEcc-CCCcEEEecCCCeEEEEecCCC
Confidence 4799999999999999999999999999999999999876543 33 3999996 99984 66666 6999999999
Q ss_pred HHHHHHHHHHcCCceeecCCCCCcccccccccCCCCCCCcccCCc-cccceeEEEEEec-CCcEecccCCCcchHHHhhc
Q 009399 154 IGEVYYRIAEKSKIHGFPAGLCTSLGVGGHITGGAYGSMMRKYGL-GADNVLDARIVDA-NGKILDREAMGEDLFWAIRG 231 (535)
Q Consensus 154 ~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~s~~~G~-~~d~v~~~~vV~~-~G~i~~~~~~~~dLf~a~rG 231 (535)
|.+|.+++.++|+ .|.++.+||+| ..||+..++.+.||. ++|+|+++++|++ +|++++.. +.|++|+||+
T Consensus 87 ~~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gYR~ 158 (340)
T 1uxy_A 87 WHRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGYRD 158 (340)
T ss_dssp HHHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBTTB
T ss_pred HHHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhccccCc
Confidence 9999999999973 67788889998 488889999999995 8999999999996 99998743 3699999998
Q ss_pred CCC----CCcEEEEEEEEEEeecCc
Q 009399 232 GGG----ASFGIILSWKIKLVPVPE 252 (535)
Q Consensus 232 ~~~----g~~GiVt~~~~k~~p~~~ 252 (535)
+.. +++||||+++||+.|.++
T Consensus 159 s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 159 SIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp CGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CccCCcCCCCEEEEEEEEEEEcCCC
Confidence 742 359999999999999764
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.85 E-value=5.5e-22 Score=195.39 Aligned_cols=151 Identities=20% Similarity=0.180 Sum_probs=129.4
Q ss_pred CceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccccCCCCCeEEEEcCCCCCeEEcCCCCeEEEeCCCcHHH
Q 009399 77 KPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYVSEIETPFIIVDLARLRAISVDIESNSAWVQTGATIGE 156 (535)
Q Consensus 77 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~~~ivIdl~~~~~i~~d~~~~~v~v~aG~~~~~ 156 (535)
.|. +|.|+|++||+++| ++|+.++|+|||+.+.+.+.+ +++||+|++|++|++|. +|+||++|.+
T Consensus 22 ~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~---~GvVI~l~~~~~I~vd~-----~v~aG~~~~~ 86 (268)
T 2gqt_A 22 PAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP---ERVIRLAGEFQTYDLKG-----WVGAGTLLPL 86 (268)
T ss_dssp EEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS---SEEEEECGGGGCBCTTS-----EEETTSBHHH
T ss_pred ceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC---CeEEEEcCCCCCcEEcC-----EEECCCCHHH
Confidence 466 99999999999999 899999999999887665444 24999999999998752 9999999999
Q ss_pred HHHHHHHcCCceeecCCCCCcccccccccCCCCCCCcccCC-ccccceeEEEEEecCCcEecccCCCcchHHHhhcCCCC
Q 009399 157 VYYRIAEKSKIHGFPAGLCTSLGVGGHITGGAYGSMMRKYG-LGADNVLDARIVDANGKILDREAMGEDLFWAIRGGGGA 235 (535)
Q Consensus 157 l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~s~~~G-~~~d~v~~~~vV~~~G~i~~~~~~~~dLf~a~rG~~~g 235 (535)
|.+++.++| + .|.++.++|+| ..||+..++.+.|| .++|+|+++++| +||++++.. +.|++|+||++...
T Consensus 87 l~~~~~~~G--l---~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~--~~~l~~~YR~s~~~ 157 (268)
T 2gqt_A 87 LVQEAARAG--L---SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC--PEELGFGYRKSHLP 157 (268)
T ss_dssp HHHHHHHTT--E---ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC--GGGSCCBTTBCCCS
T ss_pred HHHHHHHcC--C---cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc--hHHcccccCCCCcC
Confidence 999999996 3 47788889998 58888999999999 699999999999 999999743 36899999987632
Q ss_pred CcEEEEEEEEEEeecC
Q 009399 236 SFGIILSWKIKLVPVP 251 (535)
Q Consensus 236 ~~GiVt~~~~k~~p~~ 251 (535)
.-||||+++||++|.+
T Consensus 158 ~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 158 PGGIVTRVRLKLKERP 173 (268)
T ss_dssp TTCEEEEEEECCEECC
T ss_pred CCceEEEEEEEEEeCC
Confidence 1259999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.79 E-value=2.3e-19 Score=171.72 Aligned_cols=116 Identities=19% Similarity=0.178 Sum_probs=99.5
Q ss_pred eEEcCCCCeEEEeCCCcHHHHHHHHHHcCCceeecC--CCCCcccccccccCCCCCCCcccCCccccceeEEEEEecCCc
Q 009399 137 ISVDIESNSAWVQTGATIGEVYYRIAEKSKIHGFPA--GLCTSLGVGGHITGGAYGSMMRKYGLGADNVLDARIVDANGK 214 (535)
Q Consensus 137 i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~--g~~~~vgigG~~~ggg~g~~s~~~G~~~d~v~~~~vV~~~G~ 214 (535)
|++|+++++|+||||+++.+|+++|.++| +.++. |+++. +|||++.+|++| ++||.. |+|++++||++||+
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~G--l~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~ 73 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTG--LFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGR 73 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTT--EECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSC
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcC--CEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCC
Confidence 46899999999999999999999999986 44444 55665 999999999998 899999 99999999999999
Q ss_pred Eec-cc-----CCCcchHHHhhcCCCCCcEEEEEEEEEEeecCceEEEEEEE
Q 009399 215 ILD-RE-----AMGEDLFWAIRGGGGASFGIILSWKIKLVPVPETVTVFTVT 260 (535)
Q Consensus 215 i~~-~~-----~~~~dLf~a~rG~~~g~~GiVt~~~~k~~p~~~~~~~~~~~ 260 (535)
+++ .. ..++||||+++|++ |+|||||+++||++|.|+....+.+.
T Consensus 74 i~~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 74 RVRAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp EEEEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred EEEECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEEe
Confidence 986 21 34689999999987 89999999999999998866554443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.10 E-value=7.1e-06 Score=81.50 Aligned_cols=153 Identities=14% Similarity=0.149 Sum_probs=99.4
Q ss_pred CceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCC---ccccCCCCCeEEEEcCC---CCCeEEcCCCCeEEEeC
Q 009399 77 KPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGL---SYVSEIETPFIIVDLAR---LRAISVDIESNSAWVQT 150 (535)
Q Consensus 77 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~---~~~~~~~~~~ivIdl~~---~~~i~~d~~~~~v~v~a 150 (535)
.+-.++.|+|.+|+.++++.. +.+..+.||||+.... ..... +++||+++ |+.|+.+ +..+++||
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~~~----~~lIdl~~i~eL~~i~~~--~~~l~iGA 74 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFAQP----EHLIDINRIPELRGIREE--GSTVVIGA 74 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCC----SEEEECTTCGGGCCEEEE--TTEEEEET
T ss_pred CcceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCC----CEEEECCCChhhcceEec--CCEEEEcc
Confidence 456789999999999998753 3678999999996421 11122 38999985 6777663 45799999
Q ss_pred CCcHHHHHHH-HHHcCC-ceee--c-CCCC---CcccccccccCCCCCCCcccCCcccccee-------EEEEEecCCcE
Q 009399 151 GATIGEVYYR-IAEKSK-IHGF--P-AGLC---TSLGVGGHITGGAYGSMMRKYGLGADNVL-------DARIVDANGKI 215 (535)
Q Consensus 151 G~~~~~l~~~-l~~~g~-~l~~--~-~g~~---~~vgigG~~~ggg~g~~s~~~G~~~d~v~-------~~~vV~~~G~i 215 (535)
|+++.+|.+. +.+++. ++.. . .+.. +..+|||.+..+.. ..|.+. .+++..++|.
T Consensus 75 ~~tl~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G~- 144 (287)
T 1ffv_C 75 MTVENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNGR- 144 (287)
T ss_dssp TCBHHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTEE-
T ss_pred CCcHHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCce-
Confidence 9999999962 333322 1111 0 1111 23578888777632 345443 5888999993
Q ss_pred ecccCCCcchHHHhhcCCCCCcEEEEEEEEEEeec
Q 009399 216 LDREAMGEDLFWAIRGGGGASFGIILSWKIKLVPV 250 (535)
Q Consensus 216 ~~~~~~~~dLf~a~rG~~~g~~GiVt~~~~k~~p~ 250 (535)
.+.. -.|+|..+|-..-..=.|||+++|...+.
T Consensus 145 r~i~--~~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 145 RTVP--ADGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp EEEE--STTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred EEEE--HHHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 3322 24788877632212225999999977653
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.38 E-value=0.00018 Score=71.42 Aligned_cols=152 Identities=18% Similarity=0.103 Sum_probs=93.0
Q ss_pred CceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCC---ccccCCCCCeEEEEcCC---CCCeEEcCCCCeEEEeC
Q 009399 77 KPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGL---SYVSEIETPFIIVDLAR---LRAISVDIESNSAWVQT 150 (535)
Q Consensus 77 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~---~~~~~~~~~~ivIdl~~---~~~i~~d~~~~~v~v~a 150 (535)
.+-.++.|+|.+|+.++++.. +-+..+.+|||+.... ..... .++||+++ |+.|+. +++.+++||
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~~~----~~lIdl~~i~eL~~I~~--~~~~l~IGA 74 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLATP----EHLVDLRDIGDLVGIRE--EGTDVVIGA 74 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCC----SEEEECTTCGGGSCEEE--ETTEEEEET
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCC----CEEEECCCChhhcceEe--cCCEEEEcc
Confidence 456789999999999988643 3468899999995321 11122 28999986 566765 456899999
Q ss_pred CCcHHHHHH--HHHHcCCceee--cC-CCC---CcccccccccCCCCCCCcccCCcccccee-------EEEEEecCCcE
Q 009399 151 GATIGEVYY--RIAEKSKIHGF--PA-GLC---TSLGVGGHITGGAYGSMMRKYGLGADNVL-------DARIVDANGKI 215 (535)
Q Consensus 151 G~~~~~l~~--~l~~~g~~l~~--~~-g~~---~~vgigG~~~ggg~g~~s~~~G~~~d~v~-------~~~vV~~~G~i 215 (535)
++++.+|.+ .+.++-..+.- .. ++. +..+|||.+..+. ...|.+. .+++..++|+.
T Consensus 75 ~~t~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~r 145 (288)
T 1n62_C 75 MTTQHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGAR 145 (288)
T ss_dssp TCBHHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEEE
T ss_pred CCcHHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCccE
Confidence 999999994 44432101110 01 111 1347889887762 2456543 66777888843
Q ss_pred ecccCCCcchHHHhhcCCCCCcEEEEEEEEEEee
Q 009399 216 LDREAMGEDLFWAIRGGGGASFGIILSWKIKLVP 249 (535)
Q Consensus 216 ~~~~~~~~dLf~a~rG~~~g~~GiVt~~~~k~~p 249 (535)
.. .- .|+|..++-..-..=-|||++.|...+
T Consensus 146 ~v-~~--~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 146 IV-AA--RDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp EE-EH--HHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred EE-EH--HHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 21 11 355555431111122589999986554
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=96.96 E-value=0.00055 Score=72.19 Aligned_cols=150 Identities=15% Similarity=0.096 Sum_probs=96.0
Q ss_pred EEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCC---ccccCCCCCeEEEEcCC---CCCeEEcCCCCeEEEeCCCc
Q 009399 80 FIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGL---SYVSEIETPFIIVDLAR---LRAISVDIESNSAWVQTGAT 153 (535)
Q Consensus 80 ~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~---~~~~~~~~~~ivIdl~~---~~~i~~d~~~~~v~v~aG~~ 153 (535)
.++.|+|.+|+.++++... +..+.+||++.... ..... .++||+++ |+.|+.+ +..+++|||++
T Consensus 179 ~y~~P~sl~ea~~ll~~~~----~a~ilaGGT~L~~~~k~~~~~~----~~lIdl~~i~eL~~I~~~--~~~l~IGA~vt 248 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAHP----EATLIAGGTDVSLWVTKALRDL----PEVAFLSHCKDLAQIRET--PDGYGIGAGVT 248 (462)
T ss_dssp CCBCCSSHHHHHHHHHHCT----TCEEESSCTTTTHHHHTSCCCC----CSEEECTTCGGGSCEEEE--TTEEEEETTCB
T ss_pred EEEecCCHHHHHHHHhhCC----CCEEEeCCchhhhhhhccCCCC----CEEEEcCCChhhCcEEEc--CCEEEEccCCc
Confidence 4678999999999887531 57889999997532 11122 38999988 6778764 45799999999
Q ss_pred HHHHHHHHHHcCCc-e----eecCCC--CCcccccccccCCCCCCCcccCCcccccee----EEEEEecCCcEecccCCC
Q 009399 154 IGEVYYRIAEKSKI-H----GFPAGL--CTSLGVGGHITGGAYGSMMRKYGLGADNVL----DARIVDANGKILDREAMG 222 (535)
Q Consensus 154 ~~~l~~~l~~~g~~-l----~~~~g~--~~~vgigG~~~ggg~g~~s~~~G~~~d~v~----~~~vV~~~G~i~~~~~~~ 222 (535)
+.+|.+.+.+ ... + ....+. -+..+|||.+..+.++ +-...-++ .+++..++|+ .+. .-
T Consensus 249 l~~l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~------sD~~~~L~ALdA~v~l~~~~G~-R~v--p~ 318 (462)
T 2w3s_A 249 IAALRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSPI------GDGPPALIAMGASLTLRRGQER-RRM--PL 318 (462)
T ss_dssp HHHHHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT------CSHHHHHHHTTCEEEEEBTTBC-CCC--BG
T ss_pred HHHHHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCCc------chHHHHHHHcCCEEEEEeCCce-EEE--EH
Confidence 9999987433 221 1 001111 1235789988876532 44455566 7888888883 222 22
Q ss_pred cchHHHhhcCCCCCcEEEEEEEEEEee
Q 009399 223 EDLFWAIRGGGGASFGIILSWKIKLVP 249 (535)
Q Consensus 223 ~dLf~a~rG~~~g~~GiVt~~~~k~~p 249 (535)
.|+|..+|-..-..=-||+++.|...+
T Consensus 319 ~dF~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 319 EDFFLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp GGGEEETTEESCCTTCEEEEEEEESCC
T ss_pred HHhhcccccccCCCCcEEEEEEEecCC
Confidence 477776653211122599999986554
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=94.25 E-value=0.056 Score=53.22 Aligned_cols=149 Identities=17% Similarity=0.070 Sum_probs=88.6
Q ss_pred CceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCC---ccccCCCCCeEEEEcCCC---CCeEEcCCCCeEEEeC
Q 009399 77 KPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGL---SYVSEIETPFIIVDLARL---RAISVDIESNSAWVQT 150 (535)
Q Consensus 77 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~---~~~~~~~~~~ivIdl~~~---~~i~~d~~~~~v~v~a 150 (535)
.|-.++.|+|.+|+.++++. +-...+.+|||+.... ...... .+||++++ +.|+. +++.+++||
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~~~----~lIdl~~i~eL~~I~~--~~~~l~IGA 73 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVYPS----CLVDLRNVSELFEISQ--SAGILSVGA 73 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCCCS----EEEECTTCGGGGCEEE--ETTEEEEET
T ss_pred CCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCCCC----EEEECCCChhhcCeEE--cCCEEEEcC
Confidence 45678899999999998863 2236778999995311 111222 89999984 56654 456899999
Q ss_pred CCcHHHHHH--HHHHcCCcee--ecC-CC---CCcccccccccCCCCCCCcccCCcccccee-------EEEEEecCCcE
Q 009399 151 GATIGEVYY--RIAEKSKIHG--FPA-GL---CTSLGVGGHITGGAYGSMMRKYGLGADNVL-------DARIVDANGKI 215 (535)
Q Consensus 151 G~~~~~l~~--~l~~~g~~l~--~~~-g~---~~~vgigG~~~ggg~g~~s~~~G~~~d~v~-------~~~vV~~~G~i 215 (535)
++++.+|.+ .+.++-..+. +.. ++ -+..+|||.+..+- ...|... .+++..++|+.
T Consensus 74 ~vt~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R 144 (288)
T 1t3q_C 74 MVTHFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVR 144 (288)
T ss_dssp TCBHHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEE
T ss_pred CCcHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceE
Confidence 999999986 3433211111 001 11 13347888876542 1356554 67777788853
Q ss_pred ecccCCCcchHHHhhc-CCCCCcEEEEEEEEEEe
Q 009399 216 LDREAMGEDLFWAIRG-GGGASFGIILSWKIKLV 248 (535)
Q Consensus 216 ~~~~~~~~dLf~a~rG-~~~g~~GiVt~~~~k~~ 248 (535)
.. .- .|+|..++- .. ..=-|||++.|...
T Consensus 145 ~v-p~--~dF~~g~~~t~L-~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 145 SV-SA--TDFMKGHYFTDL-EAGEVLVRVEIPIP 174 (288)
T ss_dssp EE-EH--HHHEEETTEESC-CTTCEEEEEEEECC
T ss_pred EE-EH--HHHhcCcccccC-CCCCEEEEEEecCC
Confidence 32 11 244433321 11 12258999988543
No 33
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=94.24 E-value=0.047 Score=54.29 Aligned_cols=151 Identities=12% Similarity=-0.014 Sum_probs=88.8
Q ss_pred CceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCC---ccccCCCCCeEEEEcCCC---CCeEEcCCCCeEEEeC
Q 009399 77 KPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGL---SYVSEIETPFIIVDLARL---RAISVDIESNSAWVQT 150 (535)
Q Consensus 77 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~---~~~~~~~~~~ivIdl~~~---~~i~~d~~~~~v~v~a 150 (535)
.+...+.|+|.+|+.++++.. . ...+.+||++.... ..... ..+||++++ +.|+. +++.+++||
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~~---~-~a~~laGGT~l~~~~k~~~~~~----~~lIdl~~i~eL~~I~~--~~~~l~IGA 78 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQH---P-EAKLVVGNTEIGIEMKFKNQLF----PMIICPAWIPELNAVEH--GPEGISFGA 78 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHHC---T-TCEECSSCTTHHHHHHHSCCCC----SEEEECTTCGGGGCEEE--CSSEEEEET
T ss_pred CCeEEEccCCHHHHHHHHHhC---C-CCEEEECccHHHHHHhcCCCCC----CEEEECCCChhhcceEE--CCCeEEEcc
Confidence 466789999999999877542 1 25788999996421 11122 289999975 55654 456899999
Q ss_pred CCcHHHHHHHHHHc----C---C----cee--ecC-CC---CCcccccccccCCCCCCCcccCCccccce---e----EE
Q 009399 151 GATIGEVYYRIAEK----S---K----IHG--FPA-GL---CTSLGVGGHITGGAYGSMMRKYGLGADNV---L----DA 206 (535)
Q Consensus 151 G~~~~~l~~~l~~~----g---~----~l~--~~~-g~---~~~vgigG~~~ggg~g~~s~~~G~~~d~v---~----~~ 206 (535)
++++.++.+.+.++ . . .+. +.. ++ -+..+|||.+..+.. .+|.. + .+
T Consensus 79 ~vt~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p---------~sD~~~~L~AldA~v 149 (305)
T 3nvz_B 79 ACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP---------ISDLNPVFMASGTKL 149 (305)
T ss_dssp TCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT---------TCSSHHHHHHHTCEE
T ss_pred CCcHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC---------chHHHHHHHHcCCEE
Confidence 99999999876532 0 0 000 011 11 124578888776542 23432 2 56
Q ss_pred EEEecCCcEecccCCCcchHHHhhcCCCCCcEEEEEEEEEEe
Q 009399 207 RIVDANGKILDREAMGEDLFWAIRGGGGASFGIILSWKIKLV 248 (535)
Q Consensus 207 ~vV~~~G~i~~~~~~~~dLf~a~rG~~~g~~GiVt~~~~k~~ 248 (535)
++..++|+.... - ..|+|-.++--.-..=-|||++.+...
T Consensus 150 ~l~~~~G~R~vp-~-~~df~~g~~~t~l~~~Eil~~I~iP~~ 189 (305)
T 3nvz_B 150 TIVSRGTRRTVP-M-DHTFFPSYRKTLLGPEEILLSIEIPYS 189 (305)
T ss_dssp EEEETTEEEEEE-C-CGGGCCSTTCCSCCTTCEEEEEEEECC
T ss_pred EEEcCCCcEEEE-e-ehHhhcCcccccCCCCcEEEEEEecCC
Confidence 777788853321 1 114554443111011149999988543
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=93.21 E-value=0.12 Score=51.02 Aligned_cols=74 Identities=18% Similarity=0.175 Sum_probs=52.6
Q ss_pred CceEEEEcCCHHHHHHHHHHHHhcCC-eEEEEeCCCCCCC---CccccCCCCCeEEEEcCCC---CCeEEcCCCCeEEEe
Q 009399 77 KPEFIFTPLYESHVQAAVICSKQLGI-HLRVRSGGHDYEG---LSYVSEIETPFIIVDLARL---RAISVDIESNSAWVQ 149 (535)
Q Consensus 77 ~p~~vv~P~s~~dv~~~v~~a~~~~~-~v~v~ggGh~~~g---~~~~~~~~~~~ivIdl~~~---~~i~~d~~~~~v~v~ 149 (535)
+|-..+.|+|.+|+.++++. ++- ...+.+||++... ...... ..+||++++ +.|+. +++.+++|
T Consensus 2 ~~f~y~~P~sl~ea~~ll~~---~~~~~a~~laGGT~l~~~~k~~~~~~----~~lIdl~~i~eL~~I~~--~~~~l~IG 72 (296)
T 3hrd_C 2 KDFEFFAPKTLEEAKGLLHQ---YKDVPPAIIAGGTDLVIEINDRWEKP----DVVIDIKKLKELEYIRV--EENTIHIG 72 (296)
T ss_dssp CCCEEECCSSHHHHHHHHHH---TTTSCCEEESSCTTHHHHHHTTSCCC----SEEEECTTCGGGCCEEE--CSSEEEEE
T ss_pred CceeEeCCCCHHHHHHHHHh---CCCCCeEEEECCcHHHHHhhcCCCCC----CeEEEcccChhhcceEE--cCCeEEEc
Confidence 35567899999999887643 332 4678899999632 111122 289999985 55554 46799999
Q ss_pred CCCcHHHHHH
Q 009399 150 TGATIGEVYY 159 (535)
Q Consensus 150 aG~~~~~l~~ 159 (535)
|++++.++.+
T Consensus 73 A~vt~~~l~~ 82 (296)
T 3hrd_C 73 ALSTFTQIEN 82 (296)
T ss_dssp TTCBHHHHHH
T ss_pred cCCcHHHHHh
Confidence 9999999974
No 35
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=91.77 E-value=0.12 Score=53.60 Aligned_cols=28 Identities=11% Similarity=0.239 Sum_probs=22.7
Q ss_pred hhhhhhhhhhHHHHHHhHhhcCCCCCcccC
Q 009399 495 AWGSRYFKDNFMRLVRVKTKVDPDNFFRHE 524 (535)
Q Consensus 495 ~~~~~yyG~n~~RL~~IK~kyDP~~vF~~~ 524 (535)
.+... |+ +++++++||++|||+++|.+.
T Consensus 387 ~~~~~-Yp-~~~~f~~vk~~~DP~g~f~n~ 414 (422)
T 2vfr_A 387 ELRAL-YP-RLADFGALAGALDPAGKFTNA 414 (422)
T ss_dssp HHHTT-CT-THHHHHHHHHHHCTTCTTCCH
T ss_pred HHHHH-Cc-CHHHHHHHHHHhCCCCccCCH
Confidence 34443 46 799999999999999999864
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=89.38 E-value=0.45 Score=47.48 Aligned_cols=74 Identities=18% Similarity=0.088 Sum_probs=52.6
Q ss_pred CceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCC---CccccCCCCCeEEEEcCCC---CCeEEcCCCCeEEEeC
Q 009399 77 KPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEG---LSYVSEIETPFIIVDLARL---RAISVDIESNSAWVQT 150 (535)
Q Consensus 77 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g---~~~~~~~~~~~ivIdl~~~---~~i~~d~~~~~v~v~a 150 (535)
.|-.++.|+|.+|+.+++.. . .-.+.+||+++.. ...... ..+||++++ +.|+.+ +++.+++||
T Consensus 5 ~~f~y~~P~sl~ea~~ll~~---~--~a~~lAGGT~l~~~~k~~~~~p----~~lIdi~~i~eL~~I~~~-~~~~l~IGA 74 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALAA---E--ATLPLGAGTDLLPNLRRGLGHP----AALVDLTGIDGLATISTL-ADGSLRIGA 74 (324)
T ss_dssp CCCEEECCSSHHHHHHHTTS---T--TEEEESSCTTHHHHHHTTSCCC----SEEEECTTSTTTTCEEEC-TTSCEEEET
T ss_pred CceEEEccCCHHHHHHHHhC---C--CCEEEECchhHHHHHhccCCCC----CEEEECCCChhhcceEEC-CCCeEEEcc
Confidence 45568899999999988762 2 4677899999631 111122 289999876 556543 234799999
Q ss_pred CCcHHHHHHH
Q 009399 151 GATIGEVYYR 160 (535)
Q Consensus 151 G~~~~~l~~~ 160 (535)
++++.+|.+.
T Consensus 75 ~vt~~~l~~~ 84 (324)
T 1rm6_B 75 GATLEAIAEH 84 (324)
T ss_dssp TCBHHHHHHC
T ss_pred CCcHHHHHhC
Confidence 9999999864
No 37
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=84.06 E-value=2 Score=45.67 Aligned_cols=27 Identities=19% Similarity=0.180 Sum_probs=21.8
Q ss_pred hhhhhhhhhH-HHHHHhHhhcCCCCCcc
Q 009399 496 WGSRYFKDNF-MRLVRVKTKVDPDNFFR 522 (535)
Q Consensus 496 ~~~~yyG~n~-~RL~~IK~kyDP~~vF~ 522 (535)
|...+||++. +=+++||+.+||+|+|+
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlN 508 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILA 508 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBC
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCC
Confidence 4477888764 55599999999999994
No 38
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=81.19 E-value=3.1 Score=45.65 Aligned_cols=28 Identities=39% Similarity=0.587 Sum_probs=23.7
Q ss_pred hhhhhhhhh-hHHHHHHhHhhcCCCCCcc
Q 009399 495 AWGSRYFKD-NFMRLVRVKTKVDPDNFFR 522 (535)
Q Consensus 495 ~~~~~yyG~-n~~RL~~IK~kyDP~~vF~ 522 (535)
.|-..+||+ .++.|++||+.|||+|+|+
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILN 653 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFG 653 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSC
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCC
Confidence 466667764 7999999999999999995
No 39
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=75.46 E-value=2.8 Score=49.75 Aligned_cols=76 Identities=7% Similarity=-0.080 Sum_probs=53.5
Q ss_pred CceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCc---cccCCCCCeEEEEcCCC---CCeEEcCCCCeEEEeC
Q 009399 77 KPEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLS---YVSEIETPFIIVDLARL---RAISVDIESNSAWVQT 150 (535)
Q Consensus 77 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~---~~~~~~~~~ivIdl~~~---~~i~~d~~~~~v~v~a 150 (535)
.+...+.|.|.+|+.++++.. . .-.+.+||++....- .... ..+||++++ +.|+. ++..+++||
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~~--~--~a~lvaGgT~l~~~~k~~~~~~----~~lIdl~~i~EL~~I~~--~~~~l~IGA 301 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQH--P--EAKLVVGNTEIGIEMKFKNQLF----PMIICPAWIPELNAVEH--GPEGISFGA 301 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHHC--T--TCEECSSCTTHHHHHHHSCCCC----SEEEECTTCGGGGCEEE--CSSEEEEET
T ss_pred CceEEEccCCHHHHHHHHhhC--C--CCEEEEeCcHHHHHhhcCCCCC----CeEEEcCCCHHhCceEE--eCCEEEEEe
Confidence 355689999999999877532 1 246778999853111 1112 279999985 55554 456899999
Q ss_pred CCcHHHHHHHHH
Q 009399 151 GATIGEVYYRIA 162 (535)
Q Consensus 151 G~~~~~l~~~l~ 162 (535)
++++.+|.+.+.
T Consensus 302 ~vtl~~l~~~l~ 313 (1332)
T 3unc_A 302 ACALSSVEKTLL 313 (1332)
T ss_dssp TCBHHHHHHHHH
T ss_pred cChHHHHHHHHH
Confidence 999999998764
No 40
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=51.64 E-value=33 Score=36.59 Aligned_cols=21 Identities=19% Similarity=0.181 Sum_probs=18.2
Q ss_pred hhHHHHHHhHhhcCCCCCccc
Q 009399 503 DNFMRLVRVKTKVDPDNFFRH 523 (535)
Q Consensus 503 ~n~~RL~~IK~kyDP~~vF~~ 523 (535)
..++-+++||+.+||.|+|+-
T Consensus 523 ~~~~lm~~iK~~~DP~gILNP 543 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAP 543 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCT
T ss_pred HHHHHHHHHHHHcCccCCCCC
Confidence 468889999999999999953
No 41
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=45.86 E-value=9.7 Score=39.89 Aligned_cols=28 Identities=11% Similarity=0.101 Sum_probs=23.9
Q ss_pred hhhhhhhh-hhHHHHHHhHhhcCCCCCcc
Q 009399 495 AWGSRYFK-DNFMRLVRVKTKVDPDNFFR 522 (535)
Q Consensus 495 ~~~~~yyG-~n~~RL~~IK~kyDP~~vF~ 522 (535)
.|-...|| +.++-+++||+.+||.|+++
T Consensus 443 ~~l~~~~~~~~~~~m~~iK~~~DP~~ilN 471 (476)
T 3pm9_A 443 DELAEVKDKTAIELMRSIKALLDPHGIMN 471 (476)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHCTTSCBS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCC
Confidence 56667777 47999999999999999995
No 42
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=45.37 E-value=8.6 Score=41.19 Aligned_cols=22 Identities=18% Similarity=0.371 Sum_probs=20.5
Q ss_pred hhHHHHHHhHhhcCCCCCcccC
Q 009399 503 DNFMRLVRVKTKVDPDNFFRHE 524 (535)
Q Consensus 503 ~n~~RL~~IK~kyDP~~vF~~~ 524 (535)
.++++-+++|+++||+++|.++
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 7899999999999999999765
No 43
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=41.95 E-value=18 Score=43.02 Aligned_cols=76 Identities=17% Similarity=0.129 Sum_probs=49.2
Q ss_pred EEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCC---CCccccCCCCCeEEEEcCCCCCe-EEcCCCCeEEEeCCCcHH
Q 009399 80 FIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYE---GLSYVSEIETPFIIVDLARLRAI-SVDIESNSAWVQTGATIG 155 (535)
Q Consensus 80 ~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~---g~~~~~~~~~~~ivIdl~~~~~i-~~d~~~~~v~v~aG~~~~ 155 (535)
..+.|.|.+|+.++... .-+-++ ..|++... -.-..... ++||+.+...+ .+..++..+++||+|++.
T Consensus 242 ~w~~P~tl~el~~l~~~--~p~a~l--vaGnT~~gl~~~~~~~~~~----~~I~~~~v~EL~~i~~~~~~l~IGA~vtls 313 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMK--HPSAPL--VIGNTYLGLHMKFTDVSYP----IIISPARILELFVVTNTKQGLTLGTGLSLT 313 (1335)
T ss_dssp EEEECSSHHHHHHHHHH--CTTSCB--CSSCTTHHHHHC--CCCCS----EEECCTTCGGGSCEECCTTEEEEETTCBHH
T ss_pred eEecCCCHHHHHHHHHH--CCCCeE--EEecccceeeEeecCCCCC----eEEEcCcchhHheEEecCCEEEEcccCcHH
Confidence 46889999999987542 123343 45666531 11111122 89998875443 344566789999999999
Q ss_pred HHHHHHHH
Q 009399 156 EVYYRIAE 163 (535)
Q Consensus 156 ~l~~~l~~ 163 (535)
++.+.|.+
T Consensus 314 ~~~~~l~~ 321 (1335)
T 3zyv_A 314 QVKNVLSD 321 (1335)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988765
No 44
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=39.88 E-value=11 Score=40.16 Aligned_cols=23 Identities=17% Similarity=0.213 Sum_probs=21.1
Q ss_pred hhhHHHHHHhHhhcCCCCCcccC
Q 009399 502 KDNFMRLVRVKTKVDPDNFFRHE 524 (535)
Q Consensus 502 G~n~~RL~~IK~kyDP~~vF~~~ 524 (535)
|+|++.-+++++++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999764
No 45
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=38.10 E-value=42 Score=28.09 Aligned_cols=42 Identities=12% Similarity=0.167 Sum_probs=33.9
Q ss_pred cCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeE-EEEeCCCC
Q 009399 69 RYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHL-RVRSGGHD 112 (535)
Q Consensus 69 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGh~ 112 (535)
+|.. ...+..|+.+.+++++.++.+.|++.|+|. .|+-.|+.
T Consensus 42 ~W~~--~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 42 KWLD--EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp HTGG--GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 5632 247999999999999999999999999996 55666664
No 46
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=37.11 E-value=55 Score=27.21 Aligned_cols=37 Identities=14% Similarity=0.165 Sum_probs=31.8
Q ss_pred CCceEEEEcCCHHHHHHHHHHHHhcCCeE-EEEeCCCC
Q 009399 76 PKPEFIFTPLYESHVQAAVICSKQLGIHL-RVRSGGHD 112 (535)
Q Consensus 76 ~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGh~ 112 (535)
..|..|+++.+++++.++.+.|.+.|+|. .++-.|+.
T Consensus 54 g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 54 GQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 58999999999999999999999999996 45566663
No 47
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=36.77 E-value=57 Score=27.05 Aligned_cols=41 Identities=10% Similarity=0.229 Sum_probs=33.8
Q ss_pred cCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeE-EEEeCCC
Q 009399 69 RYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHL-RVRSGGH 111 (535)
Q Consensus 69 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGh 111 (535)
+|.. ...|..|+.+.+++++.++.+.|++.|+|. .++=.|+
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGK 89 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 5642 358999999999999999999999999996 4556665
No 48
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=35.16 E-value=55 Score=26.92 Aligned_cols=37 Identities=14% Similarity=0.168 Sum_probs=30.6
Q ss_pred CCCceEEEEcCCHHHHHHHHHHHHhcCCeE-EEEeCCC
Q 009399 75 MPKPEFIFTPLYESHVQAAVICSKQLGIHL-RVRSGGH 111 (535)
Q Consensus 75 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGh 111 (535)
...|..|+.+.+++++.++.+.|++.|+|. .++-.|+
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 358999999999999999999999999986 4455554
No 49
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=34.84 E-value=56 Score=26.98 Aligned_cols=38 Identities=11% Similarity=0.054 Sum_probs=31.9
Q ss_pred CCCceEEEEcCCHHHHHHHHHHHHhcCCeE-EEEeCCCC
Q 009399 75 MPKPEFIFTPLYESHVQAAVICSKQLGIHL-RVRSGGHD 112 (535)
Q Consensus 75 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGh~ 112 (535)
...|..|+.+.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 49 ~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 49 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 358999999999999999999999999986 44555554
No 50
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=34.25 E-value=18 Score=38.75 Aligned_cols=22 Identities=23% Similarity=0.196 Sum_probs=17.2
Q ss_pred hhhHHHHHHhHhhcCCCCCcccC
Q 009399 502 KDNFMRLVRVKTKVDPDNFFRHE 524 (535)
Q Consensus 502 G~n~~RL~~IK~kyDP~~vF~~~ 524 (535)
++... |++||+.+||.|+|+--
T Consensus 536 ~~~~~-m~~iK~~~DP~~ilNPG 557 (571)
T 1f0x_A 536 KAPET-LQKFYRENDPTNSMNPG 557 (571)
T ss_dssp CCCHH-HHHHHHHHCTTCCBSTT
T ss_pred CCHHH-HHHHHHHhCCCCCCCCC
Confidence 44344 99999999999999543
No 51
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=28.82 E-value=98 Score=25.44 Aligned_cols=41 Identities=17% Similarity=0.330 Sum_probs=32.9
Q ss_pred cCCCCCCCCceEEEEcCCHHHHHHHHHHHHhcCCeE-EEEeCCC
Q 009399 69 RYLTPSMPKPEFIFTPLYESHVQAAVICSKQLGIHL-RVRSGGH 111 (535)
Q Consensus 69 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGh 111 (535)
+|.. ...|..|++..+++++.++.+.|.+.|+|. .++=.|+
T Consensus 45 ~W~~--~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 45 QWEY--CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred HHHh--CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 4643 346999999999999999999999999985 4555555
No 52
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=27.60 E-value=72 Score=24.92 Aligned_cols=23 Identities=4% Similarity=-0.334 Sum_probs=19.5
Q ss_pred ceEEEEcCCHHHHHHHHHHHHhc
Q 009399 78 PEFIFTPLYESHVQAAVICSKQL 100 (535)
Q Consensus 78 p~~vv~P~s~~dv~~~v~~a~~~ 100 (535)
=-.++.|++-+|+++++...++.
T Consensus 6 ~Ivv~~P~sy~Da~~I~d~Lr~~ 28 (87)
T 3p04_A 6 TIVPVELHSFEDAQVIGGAFRDG 28 (87)
T ss_dssp SCEEEECSSGGGHHHHHHHHHTT
T ss_pred EEEEEecCcHHHHHHHHHHHHCC
Confidence 35789999999999999988763
No 53
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=27.03 E-value=24 Score=37.88 Aligned_cols=27 Identities=22% Similarity=0.455 Sum_probs=18.1
Q ss_pred hhhhhhhh-hHHHHHHhHhhcCCCCCcc
Q 009399 496 WGSRYFKD-NFMRLVRVKTKVDPDNFFR 522 (535)
Q Consensus 496 ~~~~yyG~-n~~RL~~IK~kyDP~~vF~ 522 (535)
|-...||+ .++=+++||+.+||.|+|+
T Consensus 552 ~l~~~~g~~~~~lmr~iK~a~DP~gIlN 579 (584)
T 2uuu_A 552 WMTRYATRGWINVYRSLKETIDPKDICN 579 (584)
T ss_dssp -------CTHHHHHHHHHHHHCTTCCBS
T ss_pred HHHHhcCHHHHHHHHHHHHHcCCCcCCC
Confidence 55555664 6899999999999999994
No 54
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=25.92 E-value=1.1e+02 Score=26.66 Aligned_cols=41 Identities=15% Similarity=0.190 Sum_probs=33.8
Q ss_pred eEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCccc
Q 009399 79 EFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSYV 119 (535)
Q Consensus 79 ~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~ 119 (535)
...+.|.+.+++.+.++.+.+.+.-+++..||.+....+..
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~D~t 87 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQT 87 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCCH
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcCh
Confidence 45788999999999999988766889999999997654443
No 55
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=22.96 E-value=51 Score=33.04 Aligned_cols=28 Identities=25% Similarity=0.195 Sum_probs=23.5
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEE--eCCCC
Q 009399 85 LYESHVQAAVICSKQLGIHLRVR--SGGHD 112 (535)
Q Consensus 85 ~s~~dv~~~v~~a~~~~~~v~v~--ggGh~ 112 (535)
=|.+|++++|++|+++||.|++- .=||.
T Consensus 92 YT~~di~eiv~YA~~rgI~VIPEID~PGH~ 121 (367)
T 1yht_A 92 LSYRQLDDIKAYAKAKGIELIPELDSPNHM 121 (367)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEESSSC
T ss_pred cCHHHHHHHHHHHHHcCCEEEEeccchHHH
Confidence 58899999999999999999873 34665
No 56
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=22.85 E-value=1.4e+02 Score=26.15 Aligned_cols=41 Identities=10% Similarity=0.031 Sum_probs=33.3
Q ss_pred ceEEEEcCCHHHHHHHHHHHHhc-CCeEEEEeCCCCCCCCcc
Q 009399 78 PEFIFTPLYESHVQAAVICSKQL-GIHLRVRSGGHDYEGLSY 118 (535)
Q Consensus 78 p~~vv~P~s~~dv~~~v~~a~~~-~~~v~v~ggGh~~~g~~~ 118 (535)
-...+.|.+.+++.++++.+.+. +.-+++..||.+....+.
T Consensus 45 ~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D~ 86 (172)
T 1mkz_A 45 VDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQ 86 (172)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTCC
T ss_pred eEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCCC
Confidence 34578899999999999988876 688999999998764433
No 57
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=20.16 E-value=1.1e+02 Score=23.40 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=29.0
Q ss_pred eEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCC
Q 009399 79 EFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHD 112 (535)
Q Consensus 79 ~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~ 112 (535)
.+|-...+.+|+..+++..+.+|.|+++.-.|.+
T Consensus 29 ryirtatssqdirdiiksmkdngkplvvfvngas 62 (112)
T 2lnd_A 29 RYIRTATSSQDIRDIIKSMKDNGKPLVVFVNGAS 62 (112)
T ss_dssp TTEEEECSHHHHHHHHHHHTTCCSCEEEEECSCC
T ss_pred ceeeeccchhhHHHHHHHHHhcCCeEEEEecCcc
Confidence 3466788999999999999999999999877765
No 58
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=20.15 E-value=1.6e+02 Score=25.89 Aligned_cols=39 Identities=13% Similarity=0.277 Sum_probs=31.8
Q ss_pred eEEEEcCCHHHHHHHHHHHHhc-CCeEEEEeCCCCCCCCc
Q 009399 79 EFIFTPLYESHVQAAVICSKQL-GIHLRVRSGGHDYEGLS 117 (535)
Q Consensus 79 ~~vv~P~s~~dv~~~v~~a~~~-~~~v~v~ggGh~~~g~~ 117 (535)
...+.|.+.+++.++++.+.+. +.-+++..||.+....+
T Consensus 58 ~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~~D 97 (178)
T 2pjk_A 58 GYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSPTD 97 (178)
T ss_dssp EEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSSTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCc
Confidence 4557899999999999888765 58899999999875443
No 59
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=20.12 E-value=1.7e+02 Score=26.14 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=32.6
Q ss_pred ceEEEEcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCcc
Q 009399 78 PEFIFTPLYESHVQAAVICSKQLGIHLRVRSGGHDYEGLSY 118 (535)
Q Consensus 78 p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~ 118 (535)
-...+.|.+.+++.+.++.+.+.+.-+++..||.+....+.
T Consensus 66 ~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~~D~ 106 (185)
T 3rfq_A 66 DGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTPRDV 106 (185)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCC
T ss_pred EEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCccc
Confidence 34567899999999999987656688999999999765443
Done!