Query 009400
Match_columns 535
No_of_seqs 156 out of 229
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 04:20:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009400.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009400hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vgl_S AP-2 complex subunit si 96.7 0.015 5.3E-07 52.2 11.6 81 145-230 3-86 (142)
2 1w63_Q Adapter-related protein 96.4 0.035 1.2E-06 51.1 12.4 83 145-230 3-86 (158)
3 3tjz_C Coatomer subunit zeta-1 94.7 0.28 9.7E-06 45.0 11.5 72 145-221 14-90 (153)
4 1w63_M Adaptor-related protein 94.1 0.25 8.5E-06 51.9 11.0 82 145-229 4-85 (423)
5 2vgl_M AP-2 complex subunit MU 92.7 0.68 2.3E-05 48.7 11.6 79 145-229 3-83 (435)
6 2j3t_C Trafficking protein par 90.0 3.6 0.00012 37.2 11.9 103 146-257 5-122 (145)
7 2hz5_A Dynein light chain 2A, 87.5 2.7 9.1E-05 36.6 8.8 69 145-214 28-104 (106)
8 3l7h_A RE64145P, roadblock; LC 82.2 9.6 0.00033 32.6 9.7 69 145-214 19-95 (97)
9 3cue_C Transport protein parti 81.5 3.2 0.00011 38.2 7.0 83 146-230 5-108 (159)
10 1j3w_A Giding PROTEIN-MGLB; gl 77.7 23 0.00079 32.6 11.6 98 142-239 27-136 (163)
11 3cue_A Transport protein parti 61.0 1.2E+02 0.0043 29.4 14.5 62 187-256 118-202 (219)
12 2j3w_A Sedlin, trafficking pro 60.6 62 0.0021 28.7 10.2 103 146-258 8-125 (142)
13 3leq_A Uncharacterized protein 55.7 73 0.0025 27.7 9.6 95 144-238 19-122 (126)
14 2nut_C Vesicle-trafficking pro 54.7 1.1E+02 0.0037 28.3 11.3 79 154-232 14-96 (196)
15 2fh5_A Signal recognition part 48.9 64 0.0022 30.6 8.6 91 145-239 12-106 (185)
16 2lic_A Vitellogenin; lipid tra 41.7 12 0.00042 25.8 1.7 16 1-16 14-29 (35)
17 2vx8_A Nucleoporin-like protei 35.7 2.2E+02 0.0075 26.1 9.9 84 145-232 46-129 (169)
18 4b93_A Vesicle-associated memb 30.8 1.9E+02 0.0065 26.7 8.7 62 170-232 26-87 (189)
19 4afi_A AP-3 complex subunit de 27.0 2.2E+02 0.0075 26.3 8.3 59 172-231 80-138 (173)
20 1vet_B P14, late endosomal/lys 24.9 3.4E+02 0.012 23.5 12.3 89 144-232 19-115 (125)
No 1
>2vgl_S AP-2 complex subunit sigma-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Mus musculus} SCOP: i.23.1.1 PDB: 2jkt_I 2jkr_I* 2xa7_S
Probab=96.68 E-value=0.015 Score=52.25 Aligned_cols=81 Identities=10% Similarity=0.224 Sum_probs=55.8
Q ss_pred ceEEEecCCCcceEeeCCC---chhhhhhHHHHHHHHHHHHcCCCceEEEEeCCeEEEEEecCCEEEEEEeCCCCCHHHH
Q 009400 145 KHFFILSHSGKPIYSRYGD---EHKLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEEPYESL 221 (535)
Q Consensus 145 KH~FIlS~AGKPIYSryGd---E~~ls~~mGvlqAIiSfve~~~d~L~~I~ag~~~~VFL~r~PL~LVaVS~~~Es~~~L 221 (535)
+-+||++..|||+.+||=. ++.-..+...+...+. ...+..--.+..+++++|+...+-||+||+++.++++-.+
T Consensus 3 ~~i~i~~~~Gk~~l~k~y~~~~~~~~~~~~~~f~~~v~--~~~~~~~~~~~~~~~~~vy~~~~~Lyfv~~~~~~~N~l~~ 80 (142)
T 2vgl_S 3 RFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVT--VRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAY 80 (142)
T ss_dssp EEEEEEETTSCEEEEEECSCCCHHHHHHHHHHHHHHHH--TCCTTSCSEEEETTEEEEEEEETTEEEEEEECTTSCHHHH
T ss_pred EEEEEEcCCCCEEEEEeCCCCChhhhHHHHHHHHHHHh--cCCCCCCCEEEECCEEEEEEEECCEEEEEEeCCCCCHHHH
Confidence 4689999999999999764 3333333333333333 1122233467789999999999999999999998887554
Q ss_pred HHHHHHHHH
Q 009400 222 RGQLELLYG 230 (535)
Q Consensus 222 r~QL~~Ly~ 230 (535)
|++||.
T Consensus 81 ---le~L~~ 86 (142)
T 2vgl_S 81 ---LEAIHN 86 (142)
T ss_dssp ---HHHHHH
T ss_pred ---HHHHHH
Confidence 555553
No 2
>1w63_Q Adapter-related protein complex 1 sigma 1A subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=96.42 E-value=0.035 Score=51.06 Aligned_cols=83 Identities=14% Similarity=0.191 Sum_probs=55.9
Q ss_pred ceEEEecCCCcceEeeCCCchhhhhhHHHHHHHHHHHHcCC-CceEEEEeCCeEEEEEecCCEEEEEEeCCCCCHHHHHH
Q 009400 145 KHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGK-DRIKLVRAGKHQVVFLIKGPIYLVCISCTEEPYESLRG 223 (535)
Q Consensus 145 KH~FIlS~AGKPIYSryGdE~~ls~~mGvlqAIiSfve~~~-d~L~~I~ag~~~~VFL~r~PL~LVaVS~~~Es~~~Lr~ 223 (535)
+-+||++..|||+.+||=.......-..++..+...+...+ +.--.+..+++++|+....-||+||+++.++++-.+
T Consensus 3 ~~i~Il~~~Gk~~lsk~y~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~vy~~~~~Lyfv~~~~~~~Nel~~-- 80 (158)
T 1w63_Q 3 RFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELIT-- 80 (158)
T ss_dssp EEEEEECSSSCEEEEEESSCCCHHHHHHHHHHHHHHHHTSCSSSCSEEEETTEEEEEEEETTEEEEEEECSSSCHHHH--
T ss_pred EEEEEECCCCCEEEEEeCCCCCHHHHHHHHHHHHHHHhccCCCCCCeEEECCEEEEEEEECCEEEEEEecCCCCHHHH--
Confidence 46899999999999997433322211122333333333332 223467789999999999999999999998887554
Q ss_pred HHHHHHH
Q 009400 224 QLELLYG 230 (535)
Q Consensus 224 QL~~Ly~ 230 (535)
|++||.
T Consensus 81 -le~L~~ 86 (158)
T 1w63_Q 81 -LELIHR 86 (158)
T ss_dssp -HHHHHH
T ss_pred -HHHHHH
Confidence 566653
No 3
>3tjz_C Coatomer subunit zeta-1; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus} PDB: 2hf6_A
Probab=94.69 E-value=0.28 Score=44.96 Aligned_cols=72 Identities=19% Similarity=0.310 Sum_probs=50.3
Q ss_pred ceEEEecCCCcceEeeCCCch-----hhhhhHHHHHHHHHHHHcCCCceEEEEeCCeEEEEEecCCEEEEEEeCCCCCHH
Q 009400 145 KHFFILSHSGKPIYSRYGDEH-----KLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEEPYE 219 (535)
Q Consensus 145 KH~FIlS~AGKPIYSryGdE~-----~ls~~mGvlqAIiSfve~~~d~L~~I~ag~~~~VFL~r~PL~LVaVS~~~Es~~ 219 (535)
+-+||++..|||+.+||=... +-..+..-+...+ .. .+ --.+..+++++||...+-||+|++++.+|++-
T Consensus 14 ~~ililn~~Gk~~lsK~Y~~~~~~~~~~~~~e~~i~~~~---~r-~~-~~i~~~~~~~~vy~~~~~Lyfv~~~~~~eNel 88 (153)
T 3tjz_C 14 KAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKT---HR-TD-SEIALLEGLTVVYKSSIDLYFYVIGSSYENEL 88 (153)
T ss_dssp EEEEEECTTSCEEEEEECSSSSCSHHHHHHHHHHHHHHH---SS-CC-CCEEEETTEEEEEEECSSCEEEEEEETTSCHH
T ss_pred eEEEEECCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHHH---hC-CC-CCEEEECCEEEEEEEECCEEEEEEEcCCCChH
Confidence 579999999999999974321 1122332222222 22 22 24667799999999999999999999998886
Q ss_pred HH
Q 009400 220 SL 221 (535)
Q Consensus 220 ~L 221 (535)
.+
T Consensus 89 ~i 90 (153)
T 3tjz_C 89 ML 90 (153)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 4
>1w63_M Adaptor-related protein complex 1, MU 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=94.10 E-value=0.25 Score=51.85 Aligned_cols=82 Identities=16% Similarity=0.185 Sum_probs=52.3
Q ss_pred ceEEEecCCCcceEeeCCCchhhhhhHHHHHHHHHHHHcCCCceEEEEeCCeEEEEEecCCEEEEEEeCCCCCHHHHHHH
Q 009400 145 KHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEEPYESLRGQ 224 (535)
Q Consensus 145 KH~FIlS~AGKPIYSryGdE~~ls~~mGvlqAIiSfve~~~d~L~~I~ag~~~~VFL~r~PL~LVaVS~~~Es~~~Lr~Q 224 (535)
+-+||++..||++.+||=....-.+....+...+.--.+.++.--.+..++.++|+....-|||||+++.++++-. -
T Consensus 4 ~~i~I~~~~Gk~~l~k~y~~~~~~~~~~~f~~~v~~~~~~~~~~~~i~~~~~~~vy~~~~~Lyfv~~~~~~~n~l~---~ 80 (423)
T 1w63_M 4 SAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNNLYLVATSKKNACVSL---V 80 (423)
T ss_dssp CEEEEEETTTEECSCBCCSCSCTTTTHHHHHHHHHHHHHTSCCCSEEEETTEEEEEEEETTEEEEEEESSCCCTHH---H
T ss_pred EEEEEECCCCCEEEEEecCCCCChHHHHHHHHHHhhccccCCCCCEEEECCEEEEEEEECCEEEEEEecCCCCHHH---H
Confidence 5689999999999999743321112222222222111121233346778999999999999999999998877644 3
Q ss_pred HHHHH
Q 009400 225 LELLY 229 (535)
Q Consensus 225 L~~Ly 229 (535)
|++||
T Consensus 81 le~L~ 85 (423)
T 1w63_M 81 FSFLY 85 (423)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 5
>2vgl_M AP-2 complex subunit MU-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2jkr_M 2jkt_M 2bp5_M* 2xa7_M
Probab=92.72 E-value=0.68 Score=48.72 Aligned_cols=79 Identities=18% Similarity=0.260 Sum_probs=52.8
Q ss_pred ceEEEecCCCcceEeeCCCchhhhhhHHHHHHHHHHHHcCC--CceEEEEeCCeEEEEEecCCEEEEEEeCCCCCHHHHH
Q 009400 145 KHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGK--DRIKLVRAGKHQVVFLIKGPIYLVCISCTEEPYESLR 222 (535)
Q Consensus 145 KH~FIlS~AGKPIYSryGdE~~ls~~mGvlqAIiSfve~~~--d~L~~I~ag~~~~VFL~r~PL~LVaVS~~~Es~~~Lr 222 (535)
+-+||++..||++.+||=....- .+.+.++...+.... +.--.|..+++++|+....-|||||+++.++++-.
T Consensus 3 ~~i~I~~~~Gk~~l~k~y~~~~~---~~~~~~f~~~v~~~~~~~~~~ii~~~~~~~vy~~~~~Lyfv~~~~~~~n~l~-- 77 (435)
T 2vgl_M 3 GGLFIYNHKGEVLISRVYRDDIG---RNAVDAFRVNVIHARQQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAM-- 77 (435)
T ss_dssp CEEEEECTTCCEEEEEECSSSCC---HHHHHHHHHHTTTCSSCCCCSEEEETTEEEEEEEETTEEEEEEESSCCCHHH--
T ss_pred EEEEEECCCCCEEEEEecCCCCC---hhHHHHHHHHHhccccCCCCCEEEECCEEEEEEEECCEEEEEEecCCCCHHH--
Confidence 46899999999999997543211 122233222222211 22345778999999999999999999998887644
Q ss_pred HHHHHHH
Q 009400 223 GQLELLY 229 (535)
Q Consensus 223 ~QL~~Ly 229 (535)
-|++||
T Consensus 78 -~le~L~ 83 (435)
T 2vgl_M 78 -VFEFLY 83 (435)
T ss_dssp -HHHHHH
T ss_pred -HHHHHH
Confidence 344444
No 6
>2j3t_C Trafficking protein particle complex subunit 1, trafficking protein particle complex subunit 3; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Mus musculus}
Probab=89.95 E-value=3.6 Score=37.22 Aligned_cols=103 Identities=17% Similarity=0.211 Sum_probs=67.4
Q ss_pred eEEEecCCCcceEee-CCC--------chhhhhhHHHHHHHHHHHHc-----CCCceEEEEeCCeEEEEEe-cCCEEEEE
Q 009400 146 HFFILSHSGKPIYSR-YGD--------EHKLAGFSATLQAIISFVEN-----GKDRIKLVRAGKHQVVFLI-KGPIYLVC 210 (535)
Q Consensus 146 H~FIlS~AGKPIYSr-yGd--------E~~ls~~mGvlqAIiSfve~-----~~d~L~~I~ag~~~~VFL~-r~PL~LVa 210 (535)
.|+|+..+|.|||.+ ++. ++..--+.|++.++-.+++. ..+.++.+..++.++.+.. -+.+-+|.
T Consensus 5 ~~~Ii~k~g~~iy~~~~~~~~~~~~~~~~~~~ll~g~~~Sl~~i~~klsp~~~~~~~~~~~t~~ykl~~~~T~TgiKFvl 84 (145)
T 2j3t_C 5 NLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDGFLSFQTSRYKLHYYETPTGIKVVM 84 (145)
T ss_dssp EEEEECTTSCEEEEEESSCSSCCSSCHHHHHHHHHHHHHHHHHHHHHHCSSCCSSCEEEEECSSCEEEEEECTTSCEEEE
T ss_pred EEEEEeCCCCEEEeeeecCCCcCCCCcchHHHHHHHHHHHHHHHHHHhCCCCCCCceEEEecCCEEEEEEEcCCCCEEEE
Confidence 488999999999987 221 33344457888888888774 3367899999988777544 45788888
Q ss_pred EeCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHhhhCCCCCcccCcC
Q 009400 211 ISCTEEPYESLRGQLELLYGQMILILTKSINRCFEKNPKFDMTPLLG 257 (535)
Q Consensus 211 VS~~~Es~~~Lr~QL~~Ly~QIlSiLT~~l~rif~krpNyDLRrLL~ 257 (535)
++...++ .+|.-|.-||..+- .+.--++|=|.+-.-+.
T Consensus 85 ~td~~~~--~i~~~l~~iy~~lY-------v~~v~kNPfy~~~~pI~ 122 (145)
T 2j3t_C 85 NTDLGVG--PIRDVLHHIYSALY-------VEFVVKNPLCPLGQTVQ 122 (145)
T ss_dssp EECTTCC--CCHHHHHHHHHTTH-------HHHTTTCTTSCTTSCCC
T ss_pred EecCCcc--hHHHHHHHHHHHHH-------HHHHhcCCCCCCCCcee
Confidence 8876543 36666666662111 11222567777655554
No 7
>2hz5_A Dynein light chain 2A, cytoplasmic; DNLC2A, transport protein; 2.10A {Homo sapiens} SCOP: d.110.7.1 PDB: 2b95_A
Probab=87.51 E-value=2.7 Score=36.59 Aligned_cols=69 Identities=14% Similarity=0.344 Sum_probs=51.2
Q ss_pred ceEEEecCCCcceEeeCCCchhhhhhHHHHHHHHHHHH------cCCCceEE--EEeCCeEEEEEecCCEEEEEEeCC
Q 009400 145 KHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVE------NGKDRIKL--VRAGKHQVVFLIKGPIYLVCISCT 214 (535)
Q Consensus 145 KH~FIlS~AGKPIYSryGdE~~ls~~mGvlqAIiSfve------~~~d~L~~--I~ag~~~~VFL~r~PL~LVaVS~~ 214 (535)
+=++|+...|.||-|. +|.+...-|.|.|+.++.... +..|+|+. |+..++.|+.....-.+||.|-+.
T Consensus 28 ~G~iIln~~G~pIrSt-~d~~~~~~yA~li~~L~~~A~~~vr~lDp~deL~fLRiRTkkhEimIapd~~~~LiVvQ~~ 104 (106)
T 2hz5_A 28 QGIIVVNTEGIPIKST-MDNPTTTQYASLMHSFILKARSTVRDIDPQNDLTFLRIRSKKNEIMVAPDKDYFLIVIQNP 104 (106)
T ss_dssp EEEEEECTTCCEEEES-SCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEESSCEEEEEC---CEEEEEECC
T ss_pred eEEEEEcCCCCeEEEe-cCchHHHHHHHHHHHHHHHHHHHHHccCCCCCeEEEEEEeCCcEEEEEecCCEEEEEEecC
Confidence 4589999999999986 677777788888888887443 35678875 567888888888888888887654
No 8
>3l7h_A RE64145P, roadblock; LC7, KM23, dynein, light chain, hydrolase, protei transport; 1.95A {Drosophila melanogaster} SCOP: d.110.7.1 PDB: 3l9k_A 1z09_A 2e8j_A 1y4o_A
Probab=82.24 E-value=9.6 Score=32.56 Aligned_cols=69 Identities=14% Similarity=0.315 Sum_probs=52.7
Q ss_pred ceEEEecCCCcceEeeCCCchhhhhhHHHHHHHHHHHH------cCCCceEE--EEeCCeEEEEEecCCEEEEEEeCC
Q 009400 145 KHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVE------NGKDRIKL--VRAGKHQVVFLIKGPIYLVCISCT 214 (535)
Q Consensus 145 KH~FIlS~AGKPIYSryGdE~~ls~~mGvlqAIiSfve------~~~d~L~~--I~ag~~~~VFL~r~PL~LVaVS~~ 214 (535)
.-++|+...|.||-|.. |.+...-|.+.++.++...+ +..|+|.. |+..++.|......-..|+.|-+.
T Consensus 19 ~G~iI~n~~G~pirst~-d~~~~~~yA~~~~~L~~~a~~~vrdlDp~del~fLRiRTkk~EimIaPd~~f~liVvQ~~ 95 (97)
T 3l7h_A 19 VGTIVVNNEGIPVKSTL-DNTTTVQYAGLMSQLADKARSVVRDLDPSNDMTFLRVRSKKHEIMVAPDKDFILIVIQNP 95 (97)
T ss_dssp EEEEEEETTSCEEEESS-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEESSCEEEEEEETTEEEEEEEC-
T ss_pred eEEEEECCCCCEeEEeC-ChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEEeCCcEEEEEcCCCEEEEEEecC
Confidence 35799999999998865 55566678888888876543 34588875 567899999998888999988654
No 9
>3cue_C Transport protein particle 18 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae}
Probab=81.50 E-value=3.2 Score=38.23 Aligned_cols=83 Identities=19% Similarity=0.345 Sum_probs=58.6
Q ss_pred eEEEecCCCcceEee-CC--------------CchhhhhhHHHHHHHHHHHHc-----CCCceEEEEeCCeEEEEEec-C
Q 009400 146 HFFILSHSGKPIYSR-YG--------------DEHKLAGFSATLQAIISFVEN-----GKDRIKLVRAGKHQVVFLIK-G 204 (535)
Q Consensus 146 H~FIlS~AGKPIYSr-yG--------------dE~~ls~~mGvlqAIiSfve~-----~~d~L~~I~ag~~~~VFL~r-~ 204 (535)
.|+|+..+|.|||.| +. +++..--+.|++.++-.+++. ..+.+..+.+++.++.+..- +
T Consensus 5 ~~~Ii~r~g~~iy~~~~~~~~~~~~~~~~~~~~~~~~~ll~g~~~SL~~i~~kls~~~~~~~f~~~~T~~ykl~~~eT~T 84 (159)
T 3cue_C 5 SFWIFDRHCNCIFDREWTLASNSASGTINSKQNEEDAKLLYGMIFSLRSITQKLSKGSVKNDIRSISTGKYRVHTYCTAS 84 (159)
T ss_dssp EEEEECSSSCEEECCCC-------------CCHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCEEEEECSSCBEEEECCSS
T ss_pred EEEEEcCCCceEEeeeeccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhCCCCCCCCeEEEeeCCEEEEEEEeCC
Confidence 589999999999976 31 133344466788888888774 23789999999988776654 4
Q ss_pred CEEEEEEeCCCCCHHHHHHHHHHHHH
Q 009400 205 PIYLVCISCTEEPYESLRGQLELLYG 230 (535)
Q Consensus 205 PL~LVaVS~~~Es~~~Lr~QL~~Ly~ 230 (535)
-+-||.++...+ ..++.-|..||.
T Consensus 85 giKFvl~td~~~--~~i~~~l~~iy~ 108 (159)
T 3cue_C 85 GLWFVLLSDFKQ--QSYTQVLQYIYS 108 (159)
T ss_dssp CCEEEEECCSSS--SCTHHHHHHHHH
T ss_pred CCEEEEEeCCCc--chHHHHHHHHHH
Confidence 688999987543 345666666664
No 10
>1j3w_A Giding PROTEIN-MGLB; gliding, motility, mutational function, riken structur genomics/proteomics initiative, RSGI, structural genomics; HET: MES; 1.50A {Thermus thermophilus} SCOP: d.110.7.1 PDB: 3t1r_A 3t1s_A 3t1x_A
Probab=77.73 E-value=23 Score=32.55 Aligned_cols=98 Identities=12% Similarity=0.081 Sum_probs=64.8
Q ss_pred ccCceEEEecCCCcceEe-----eCC--CchhhhhhHHHHHHHHHHHH-c-CCCceE--EEEeCCeEEEEEecCC-EEEE
Q 009400 142 KRKKHFFILSHSGKPIYS-----RYG--DEHKLAGFSATLQAIISFVE-N-GKDRIK--LVRAGKHQVVFLIKGP-IYLV 209 (535)
Q Consensus 142 ~~~KH~FIlS~AGKPIYS-----ryG--dE~~ls~~mGvlqAIiSfve-~-~~d~L~--~I~ag~~~~VFL~r~P-L~LV 209 (535)
..-+|.+|+|.-|-+|-+ .-+ |.+.+++.++.++++..-.. . +..+++ .|...+..+++..=|+ -+|+
T Consensus 27 ~Gv~~avlvs~DGl~ia~~~~~~~~~~~d~d~lAA~~A~~~sl~~~~a~~l~~G~~~q~~ve~~~g~l~v~~~g~~a~L~ 106 (163)
T 1j3w_A 27 TGARYALLIDRKGFVLAHKEALWAPKPPPLDTLATLVAGNAAATQALAKLLGEARFQEEVHQGERMGLYVDEAGEHALLV 106 (163)
T ss_dssp HCCSEEEEEETTSCEEEEEECTTSCCCSCHHHHHHHHHHHHHHTHHHHHHTTCSSCSEEEEECSSCEEEEEESSTTEEEE
T ss_pred CCceEEEEEcCCCCEEEeecccccCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCcEEEEEEeCCCeEEE
Confidence 356899999999999998 433 55556665555555543221 1 223343 3444555555555565 8888
Q ss_pred EEeCCCCCHHHHHHHHHHHHHHHHhhhhHH
Q 009400 210 CISCTEEPYESLRGQLELLYGQMILILTKS 239 (535)
Q Consensus 210 aVS~~~Es~~~Lr~QL~~Ly~QIlSiLT~~ 239 (535)
.+...+-..-.++.++.-+=.+|-.+|+..
T Consensus 107 Vla~~~a~lG~v~~~m~~~v~~l~~~L~~~ 136 (163)
T 1j3w_A 107 LVFDETAPLGKVKLHGKRASEALARIAEEA 136 (163)
T ss_dssp EEECTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 888888788888888888777877666643
No 11
>3cue_A Transport protein particle 23 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae}
Probab=61.01 E-value=1.2e+02 Score=29.36 Aligned_cols=62 Identities=15% Similarity=0.225 Sum_probs=37.5
Q ss_pred ceEEEEeCCeEEE-EEecCCEEEEEEeCCCCCH----------------------HHHHHHHHHHHHHHHhhhhHHHHHH
Q 009400 187 RIKLVRAGKHQVV-FLIKGPIYLVCISCTEEPY----------------------ESLRGQLELLYGQMILILTKSINRC 243 (535)
Q Consensus 187 ~L~~I~ag~~~~V-FL~r~PL~LVaVS~~~Es~----------------------~~Lr~QL~~Ly~QIlSiLT~~l~ri 243 (535)
.++.++.++.++. |..-+-+-||++.....++ ..+|.-|.-||.--+ +.
T Consensus 118 g~~~~~Td~y~l~~f~T~TGiKFVlltd~~~~~~~~s~~~~~~~~~~~~~s~l~e~~ir~ff~~VYelYv--------d~ 189 (219)
T 3cue_A 118 GLRQLCTDQFTMFIYQTLTGLKFVAISSSVMPQRQPTIATTDKPDRPKSTSNLAIQIADNFLRKVYCLYS--------DY 189 (219)
T ss_dssp SCCEEEESSCEEEEEECTTSCEEEEEESSCC--------------------CHHHHHHHHHHHHHHHHHH--------HH
T ss_pred ceEEEEeCCEEEEEEEcCCCCEEEEEecCCCcccccccccccccccccccccchHHHHHHHHHHHHHHHH--------HH
Confidence 5778888887765 4445568888887654422 567777777773322 22
Q ss_pred hhhCCCCCcccCc
Q 009400 244 FEKNPKFDMTPLL 256 (535)
Q Consensus 244 f~krpNyDLRrLL 256 (535)
.-|+|=|++-.-+
T Consensus 190 VmkNPFY~~~~pI 202 (219)
T 3cue_A 190 VMKDPSYSMEMPI 202 (219)
T ss_dssp HHSCTTCCTTSCC
T ss_pred HhcCCCCCCCCcc
Confidence 2367777765444
No 12
>2j3w_A Sedlin, trafficking protein particle complex protein 2; multisubunit tethering factor, trapp, palmitate, transport, lipoprotein; HET: PLM; 2.1A {Mus musculus} SCOP: d.110.4.3 PDB: 1h3q_A
Probab=60.56 E-value=62 Score=28.74 Aligned_cols=103 Identities=15% Similarity=0.284 Sum_probs=60.6
Q ss_pred eEEEecCCCcceEee-CCCc-------hhhhhhHHHHHHHHHHHHc----CCC-ceEEE-EeCCeEEE-EEecCCEEEEE
Q 009400 146 HFFILSHSGKPIYSR-YGDE-------HKLAGFSATLQAIISFVEN----GKD-RIKLV-RAGKHQVV-FLIKGPIYLVC 210 (535)
Q Consensus 146 H~FIlS~AGKPIYSr-yGdE-------~~ls~~mGvlqAIiSfve~----~~d-~L~~I-~ag~~~~V-FL~r~PL~LVa 210 (535)
-|.|+...|.|||.+ ++.. +.---+-+++.+...+++. .++ .+..+ ...+.++. |..-+.+-+|.
T Consensus 8 ~~~Ii~~~~~ply~~~~~~~~~~~~~~~~~l~~~~i~hs~ldiv~~~~~~~~~~~l~~~~~~~~y~v~~~~T~tg~Kfvl 87 (142)
T 2j3w_A 8 YFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFNEWFVSAFVTAGHMRFIM 87 (142)
T ss_dssp EEEEECTTSCEEEEEEECCSCCGGGHHHHHHHHHHHHHHHHHHHHHHGGGCSCSEEEEEEEETTEEEEEEECTTCCEEEE
T ss_pred EEEEEeCCCCEEEEEecCCcCcCCccHHHHHHHHHHHHHHHHHHHHhcCCCCcceeEeeecccceEEEEEEcCCCcEEEE
Confidence 588999999999977 4442 2211234677888777764 122 23332 23444444 44445677777
Q ss_pred EeCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHhhhCCCCCcccCcCc
Q 009400 211 ISCTEEPYESLRGQLELLYGQMILILTKSINRCFEKNPKFDMTPLLGG 258 (535)
Q Consensus 211 VS~~~Es~~~Lr~QL~~Ly~QIlSiLT~~l~rif~krpNyDLRrLL~G 258 (535)
+.... ....++.-|.-||..-+ +..- +|=|.+-.-+..
T Consensus 88 ~~d~~-~~~~i~~~~~~iy~~Y~--------~~v~-NPfy~~~~pI~s 125 (142)
T 2j3w_A 88 LHDVR-QEDGIKNFFTDVYDLYI--------KFAM-NPFYEPNSPIRS 125 (142)
T ss_dssp EESSC-CHHHHHHHHHHHHHHHH--------HHHH-STTCCTTCCCCC
T ss_pred EeCCC-CcHHHHHHHHHHHHHHH--------HHhc-CCCCCCCCceec
Confidence 76542 46778888888884322 2222 677777655543
No 13
>3leq_A Uncharacterized protein CVNB5; PSI, MCSG, structural genomics, midwest center for structura genomics, protein structure initiative; 1.85A {Streptomyces avermitilis}
Probab=55.72 E-value=73 Score=27.72 Aligned_cols=95 Identities=20% Similarity=0.266 Sum_probs=56.9
Q ss_pred CceEEEecCCCcceEeeCC-C---chhhhhhHHHHHHHHHHHH--cCCCceE--EEEeCCeEEEEEecCC-EEEEEEeCC
Q 009400 144 KKHFFILSHSGKPIYSRYG-D---EHKLAGFSATLQAIISFVE--NGKDRIK--LVRAGKHQVVFLIKGP-IYLVCISCT 214 (535)
Q Consensus 144 ~KH~FIlS~AGKPIYSryG-d---E~~ls~~mGvlqAIiSfve--~~~d~L~--~I~ag~~~~VFL~r~P-L~LVaVS~~ 214 (535)
=+|..++|.-|-||-+..+ + .+.++..++.++++..-.. -+.+.++ .|+..+..+++..=++ .+|+.+...
T Consensus 19 v~~avlvs~DGl~ia~~~~~~~~dae~lAA~~a~l~sl~~~~~~~~~~G~~~qv~ve~~~G~l~v~~ag~~a~L~vla~~ 98 (126)
T 3leq_A 19 VDHAVVLSEDGLVVSKSTGFLRDDAERLAATASGLMSLSKGVSMDFRRGPVRQALIEMGKGYLILTAAGPGAHLVVLTRQ 98 (126)
T ss_dssp EEEEEEEETTSCEEEECTTSCHHHHHHHHHHHHHHHHC-------------CEEEEECSSCEEEEEESSTTEEEEEEECT
T ss_pred ceEEEEEcCCCcEEEeeCCCCcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEEeCCCEEEEEEeCCCcEEEEEeCC
Confidence 4689999999999998764 3 2456665555555443221 1234444 3455566666666665 888888888
Q ss_pred CCCHHHHHHHHHHHHHHHHhhhhH
Q 009400 215 EEPYESLRGQLELLYGQMILILTK 238 (535)
Q Consensus 215 ~Es~~~Lr~QL~~Ly~QIlSiLT~ 238 (535)
+-....++.++.-+=.+|-..||.
T Consensus 99 ~a~lG~v~~em~~~v~ri~~~L~~ 122 (126)
T 3leq_A 99 GADVGVVAYQMNMLVKKIGEHLSA 122 (126)
T ss_dssp TCCHHHHHHHHHHHHHHC------
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCC
Confidence 888888888888877777666663
No 14
>2nut_C Vesicle-trafficking protein SEC22B; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_C 3egd_C 3egx_C 1ifq_A
Probab=54.74 E-value=1.1e+02 Score=28.34 Aligned_cols=79 Identities=13% Similarity=0.217 Sum_probs=52.8
Q ss_pred CcceEeeCCCc----hhhhhhHHHHHHHHHHHHcCCCceEEEEeCCeEEEEEecCCEEEEEEeCCCCCHHHHHHHHHHHH
Q 009400 154 GKPIYSRYGDE----HKLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEEPYESLRGQLELLY 229 (535)
Q Consensus 154 GKPIYSryGdE----~~ls~~mGvlqAIiSfve~~~d~L~~I~ag~~~~VFL~r~PL~LVaVS~~~Es~~~Lr~QL~~Ly 229 (535)
|.|+....-.+ .++..+-.++..|+..+....+.-.++..|++.|.|+..+.|+++||+...-|...-..-|+-|.
T Consensus 14 ~~iLa~~~d~~~~~~~~~~~~~~~a~~il~ki~~~~~~r~s~~~~~y~fhy~~~~gl~~l~i~d~~yp~r~af~fL~~i~ 93 (196)
T 2nut_C 14 GLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLH 93 (196)
T ss_dssp CCEEEEECCCC-----CHHHHHHHHHHHHHHCCTTSCSEEEEEETTEEEEEEEETTEEEEEEEETTSCHHHHHHHHHHHH
T ss_pred CcEEEEeecccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEeCCEEEEEEeCCCeEEEEEEcCCcchHHHHHHHHHHH
Confidence 77777654322 13445556666666666543445567888999999999999999999987777655444455444
Q ss_pred HHH
Q 009400 230 GQM 232 (535)
Q Consensus 230 ~QI 232 (535)
...
T Consensus 94 ~~F 96 (196)
T 2nut_C 94 SEF 96 (196)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 15
>2fh5_A Signal recognition particle receptor alpha subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Homo sapiens} SCOP: d.110.4.4 PDB: 2go5_1
Probab=48.92 E-value=64 Score=30.58 Aligned_cols=91 Identities=9% Similarity=0.026 Sum_probs=57.9
Q ss_pred ceEEEecCCCcceEeeCCCchhhhhhHHHHHHHHH--HHHcCCCceEEEEeCCe--EEEEEecCCEEEEEEeCCCCCHHH
Q 009400 145 KHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIIS--FVENGKDRIKLVRAGKH--QVVFLIKGPIYLVCISCTEEPYES 220 (535)
Q Consensus 145 KH~FIlS~AGKPIYSryGdE~~ls~~mGvlqAIiS--fve~~~d~L~~I~ag~~--~~VFL~r~PL~LVaVS~~~Es~~~ 220 (535)
.||.|||..|==+|+.-|... .+...+.+||. ++|+.... .....++. +..|.+.=-|+||+|-..--.-.+
T Consensus 12 D~~~IfTkGGvVLWs~~~~~~---~~~~~IN~LIr~VlLEER~~~-~~y~~d~ytlkW~l~NEl~LVFVvVYQ~iL~L~Y 87 (185)
T 2fh5_A 12 DFFTIFSKGGLVLWCFQGVSD---SCTGPVNALIRSVLLQERGGN-NSFTHEALTLKYKLDNQFELVFVVGFQKILTLTY 87 (185)
T ss_dssp SEEEEEETTSBEEEEEBTTTB---SCCCHHHHHHHHTGGGC--------CCCCCEEEEEEETTTTEEEEEEESCGGGHHH
T ss_pred eEEEEEeCCeEEEEeecCCcc---cccchHHHHHHHhhhccccCC-CceeEcCeEEEEEEeccCCEEEEEEEcccccchH
Confidence 589999999999999435322 23456899999 55653321 13444554 778888889999999876555555
Q ss_pred HHHHHHHHHHHHHhhhhHH
Q 009400 221 LRGQLELLYGQMILILTKS 239 (535)
Q Consensus 221 Lr~QL~~Ly~QIlSiLT~~ 239 (535)
+-.-|+-+...++-.....
T Consensus 88 iD~LL~~v~~~Fv~~Y~~~ 106 (185)
T 2fh5_A 88 VDKLIDDVHRLFRDKYRTE 106 (185)
T ss_dssp HHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5556665555555544333
No 16
>2lic_A Vitellogenin; lipid transport; HET: SEP; NMR {Apis mellifera}
Probab=41.74 E-value=12 Score=25.77 Aligned_cols=16 Identities=69% Similarity=0.536 Sum_probs=12.5
Q ss_pred CCCCCCCCCCCccccc
Q 009400 1 MSTSSSSPSSDEELIF 16 (535)
Q Consensus 1 ~~~~~~~~~~~~~~~~ 16 (535)
+|+||||+|++++.++
T Consensus 14 istssssissseendf 29 (35)
T 2lic_A 14 ISTSSSSISSSEENDF 29 (35)
T ss_dssp SCSCSSCCSTTCSCSS
T ss_pred cccccccccccccccc
Confidence 4789999998877654
No 17
>2vx8_A Nucleoporin-like protein RIP, vesicle-associated membrane protein 7; endocytosis,exocytosis, endocytosis, exocytosis, acetylation, coiled coil; 2.2A {Homo sapiens} PDB: 2dmw_A
Probab=35.73 E-value=2.2e+02 Score=26.12 Aligned_cols=84 Identities=10% Similarity=0.101 Sum_probs=55.1
Q ss_pred ceEEEecCCCcceEeeCCCchhhhhhHHHHHHHHHHHHcCCCceEEEEeCCeEEEEEecCCEEEEEEeCCCCCHHHHHHH
Q 009400 145 KHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEEPYESLRGQ 224 (535)
Q Consensus 145 KH~FIlS~AGKPIYSryGdE~~ls~~mGvlqAIiSfve~~~d~L~~I~ag~~~~VFL~r~PL~LVaVS~~~Es~~~Lr~Q 224 (535)
-.|-+++..|.+++..-.... .+-.+..+|+..+.. .+.-..+..|+..|.|+..+.|++|||+...-+...--.-
T Consensus 46 ilYa~VaRG~~VLae~t~~~g---nf~~iak~ll~kl~~-~~~r~s~~~~~y~fHyl~~ngl~yl~I~D~~yp~r~AF~f 121 (169)
T 2vx8_A 46 ILFAVVARGTTILAKHAWCGG---NFLEVTEQILAKIPS-ENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSF 121 (169)
T ss_dssp CCEEEEEETTEEEEEEESSCB---SHHHHHHHHHTTSCS-SCEEEEEEETTEEEEEEEETTEEEEEEEETTSCHHHHHHH
T ss_pred eEEEEEEcCCEEEEEeccCCC---CHHHHHHHHHhhCCC-CCCceEEEECCEEEEEEEECCEEEEEEEccccchHHHHHH
Confidence 467777787777765323222 334456666665544 3445678889999999999999999999877666554444
Q ss_pred HHHHHHHH
Q 009400 225 LELLYGQM 232 (535)
Q Consensus 225 L~~Ly~QI 232 (535)
|+-|....
T Consensus 122 LedI~~eF 129 (169)
T 2vx8_A 122 LNEVKKRF 129 (169)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444443
No 18
>4b93_A Vesicle-associated membrane protein 7; endocytosis, exocytosis, snare; 2.00A {Mus musculus} PDB: 2dmw_A
Probab=30.84 E-value=1.9e+02 Score=26.70 Aligned_cols=62 Identities=11% Similarity=0.167 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHcCCCceEEEEeCCeEEEEEecCCEEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 009400 170 FSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEEPYESLRGQLELLYGQM 232 (535)
Q Consensus 170 ~mGvlqAIiSfve~~~d~L~~I~ag~~~~VFL~r~PL~LVaVS~~~Es~~~Lr~QL~~Ly~QI 232 (535)
|..+...|+..+.. .+.-.++..|++.|.|+..+.|+++||+...-|...--.-|+=|....
T Consensus 26 f~~ia~~iL~kip~-~~~k~s~~~~~y~fHyl~~~gl~yl~i~d~~yp~r~af~fL~~i~~eF 87 (189)
T 4b93_A 26 FLEVTEQILAKIPS-ENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRF 87 (189)
T ss_dssp HHHHHHHHHTTCCS-SSEEEEEEETTEEEEEEEETTEEEEEEEETTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC-CCCeEEEEECCEEEEEEEeCCeEEEEEEcCccCHHHHHHHHHHHHHHH
Confidence 34445555554432 344567889999999999999999999987766654444444444433
No 19
>4afi_A AP-3 complex subunit delta-1, vesicle-associated protein 7; endocytosis, exocytosis, clathrin adaptor, chimera, fusion P; 2.80A {Homo sapiens}
Probab=27.01 E-value=2.2e+02 Score=26.26 Aligned_cols=59 Identities=10% Similarity=0.139 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHcCCCceEEEEeCCeEEEEEecCCEEEEEEeCCCCCHHHHHHHHHHHHHH
Q 009400 172 ATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEEPYESLRGQLELLYGQ 231 (535)
Q Consensus 172 GvlqAIiSfve~~~d~L~~I~ag~~~~VFL~r~PL~LVaVS~~~Es~~~Lr~QL~~Ly~Q 231 (535)
.+...|+..+.. ++.-.++..|++.|.|+.++.++++||+...-+...--.-|+-|...
T Consensus 80 ~va~~iL~kip~-~~~r~t~~~~~y~fHyl~~dgl~yl~i~D~~~~rr~aF~FLedI~~e 138 (173)
T 4afi_A 80 EVTEQILAKIPS-ENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKR 138 (173)
T ss_dssp HHHHHHHTTSCS-SSEEEEEEETTEEEEEEEETTEEEEEEEETTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-CCCeEEEEECCEEEEEEEECCEEEEEEECCccChhHHHHHHHHHHHH
Confidence 344444444433 24556788899999999999999999998776665444444444433
No 20
>1vet_B P14, late endosomal/lysosomal MP1 interacting protein; profilin, scaffold, adaptor, signaling protein/protein binding complex; 1.90A {Mus musculus} SCOP: d.110.7.1 PDB: 2zl1_B 1veu_B 1szv_A 1sko_B 3cpt_B
Probab=24.91 E-value=3.4e+02 Score=23.48 Aligned_cols=89 Identities=15% Similarity=0.150 Sum_probs=56.1
Q ss_pred CceEEEecCCCcceEeeCC---CchhhhhhHHHHHHHHHHHHc---CCCceE--EEEeCCeEEEEEecCCEEEEEEeCCC
Q 009400 144 KKHFFILSHSGKPIYSRYG---DEHKLAGFSATLQAIISFVEN---GKDRIK--LVRAGKHQVVFLIKGPIYLVCISCTE 215 (535)
Q Consensus 144 ~KH~FIlS~AGKPIYSryG---dE~~ls~~mGvlqAIiSfve~---~~d~L~--~I~ag~~~~VFL~r~PL~LVaVS~~~ 215 (535)
=+|.+++|.-|-+|=+.-+ |.+.+++.++.++.+..-... .++.++ .|...+..+.+..=+..+|+.++..+
T Consensus 19 v~~a~lvs~DGllia~s~~~~~dae~laAias~~~sl~~~~~~~~~~~g~~~q~~ve~~~G~l~i~~a~~a~L~Vla~~~ 98 (125)
T 1vet_B 19 VQSTLLLNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILMDCMEGRVAITRVANLLLCMYAKET 98 (125)
T ss_dssp EEEEEEECTTCCEEEEEECCSSCHHHHHHHHHHHHHHHHHHHCCTTTCCCCCEEEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred ceEEEEECCCCCeEEecCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEEeCCCEEEEEEcCCeEEEEEeCCC
Confidence 3799999999999987544 334566666666555443322 224454 34455554444444778999888877
Q ss_pred CCHHHHHHHHHHHHHHH
Q 009400 216 EPYESLRGQLELLYGQM 232 (535)
Q Consensus 216 Es~~~Lr~QL~~Ly~QI 232 (535)
-..-.++.+..-+-.+|
T Consensus 99 a~lGlv~~~m~~lv~~L 115 (125)
T 1vet_B 99 VGFGMLKAKAQALVQYL 115 (125)
T ss_dssp SCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHH
Confidence 77777777766555443
Done!