Query 009404
Match_columns 535
No_of_seqs 379 out of 2583
Neff 8.8
Searched_HMMs 46136
Date Thu Mar 28 12:42:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009404.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009404hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 1.2E-55 2.6E-60 449.6 26.4 291 211-513 61-355 (361)
2 KOG0192 Tyrosine kinase specif 100.0 9.7E-49 2.1E-53 396.3 21.8 261 228-515 44-308 (362)
3 KOG1026 Nerve growth factor re 100.0 2.1E-49 4.6E-54 418.4 17.4 263 225-515 486-767 (774)
4 KOG0197 Tyrosine kinases [Sign 100.0 1.2E-49 2.5E-54 402.0 14.6 256 227-513 208-464 (468)
5 KOG0581 Mitogen-activated prot 100.0 1.1E-47 2.3E-52 371.4 17.3 262 215-511 76-340 (364)
6 KOG2052 Activin A type IB rece 100.0 2E-45 4.3E-50 360.9 25.1 284 215-516 201-509 (513)
7 KOG0575 Polo-like serine/threo 100.0 8.2E-46 1.8E-50 377.7 20.1 249 225-506 18-269 (592)
8 KOG0595 Serine/threonine-prote 100.0 3.6E-45 7.8E-50 356.7 18.1 203 224-441 9-219 (429)
9 KOG0196 Tyrosine kinase, EPH ( 100.0 2.9E-46 6.2E-51 387.3 10.9 264 225-516 629-897 (996)
10 KOG1094 Discoidin domain recep 100.0 1E-44 2.2E-49 365.1 19.2 271 220-511 533-805 (807)
11 KOG0615 Serine/threonine prote 100.0 2.4E-45 5.2E-50 357.3 14.3 256 223-509 170-440 (475)
12 KOG4721 Serine/threonine prote 100.0 1.5E-45 3.2E-50 369.6 12.3 255 219-514 118-372 (904)
13 KOG0598 Ribosomal protein S6 k 100.0 1.5E-44 3.3E-49 349.5 15.8 244 224-499 24-270 (357)
14 KOG0591 NIMA (never in mitosis 100.0 2.6E-45 5.7E-50 340.8 7.9 258 226-508 20-283 (375)
15 KOG1095 Protein tyrosine kinas 100.0 4.3E-44 9.2E-49 391.1 16.6 265 224-516 691-967 (1025)
16 KOG3653 Transforming growth fa 100.0 1E-42 2.2E-47 344.3 23.1 276 229-515 214-508 (534)
17 KOG0193 Serine/threonine prote 100.0 9E-44 1.9E-48 361.1 15.8 280 215-522 382-666 (678)
18 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.2E-43 9E-48 358.6 20.4 266 222-513 4-337 (338)
19 KOG0198 MEKK and related serin 100.0 3.7E-43 8E-48 345.4 16.3 261 226-511 18-281 (313)
20 KOG1025 Epidermal growth facto 100.0 5.6E-43 1.2E-47 363.9 17.2 258 229-516 700-963 (1177)
21 KOG0593 Predicted protein kina 100.0 5.1E-43 1.1E-47 328.6 14.5 266 225-505 2-283 (396)
22 KOG0194 Protein tyrosine kinas 100.0 2.4E-43 5.2E-48 361.7 12.3 267 219-515 151-425 (474)
23 KOG0592 3-phosphoinositide-dep 100.0 9.9E-43 2.1E-47 349.6 15.9 255 224-506 72-338 (604)
24 KOG0582 Ste20-like serine/thre 100.0 7.5E-42 1.6E-46 336.0 20.6 265 225-506 26-293 (516)
25 PHA02988 hypothetical protein; 100.0 2.2E-41 4.8E-46 337.2 23.1 251 230-511 25-280 (283)
26 KOG0578 p21-activated serine/t 100.0 3.3E-42 7.1E-47 348.7 16.8 251 224-506 272-523 (550)
27 KOG0661 MAPK related serine/th 100.0 8.8E-43 1.9E-47 345.0 11.7 268 224-506 9-291 (538)
28 KOG0600 Cdc2-related protein k 100.0 8.4E-42 1.8E-46 340.3 17.3 270 225-506 117-400 (560)
29 KOG4278 Protein tyrosine kinas 100.0 3.1E-42 6.8E-47 348.3 13.4 268 217-515 259-528 (1157)
30 cd05104 PTKc_Kit Catalytic dom 100.0 5.5E-41 1.2E-45 347.6 20.7 261 223-510 33-374 (375)
31 KOG0659 Cdk activating kinase 100.0 9E-41 2E-45 308.6 19.1 267 225-506 2-281 (318)
32 cd05106 PTKc_CSF-1R Catalytic 100.0 7.2E-41 1.6E-45 346.6 18.8 264 221-511 34-373 (374)
33 cd05096 PTKc_DDR1 Catalytic do 100.0 1.5E-40 3.2E-45 334.6 20.4 264 225-509 5-304 (304)
34 cd05064 PTKc_EphR_A10 Catalyti 100.0 2E-40 4.3E-45 327.1 20.9 256 225-510 5-265 (266)
35 PF07714 Pkinase_Tyr: Protein 100.0 2.5E-41 5.5E-46 332.3 14.5 250 230-507 4-259 (259)
36 cd05631 STKc_GRK4 Catalytic do 100.0 2.5E-40 5.3E-45 330.0 21.1 252 227-506 2-261 (285)
37 cd05048 PTKc_Ror Catalytic Dom 100.0 2.5E-40 5.5E-45 329.0 21.1 258 225-510 5-283 (283)
38 KOG0583 Serine/threonine prote 100.0 3.6E-40 7.9E-45 336.7 21.5 253 223-508 15-277 (370)
39 cd06649 PKc_MEK2 Catalytic dom 100.0 6.6E-40 1.4E-44 334.0 23.3 270 224-508 4-303 (331)
40 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.8E-40 8.2E-45 343.1 21.9 265 221-512 33-399 (400)
41 KOG0616 cAMP-dependent protein 100.0 6.8E-41 1.5E-45 313.7 14.4 237 225-497 44-283 (355)
42 KOG4257 Focal adhesion tyrosin 100.0 1E-40 2.2E-45 338.0 16.6 262 222-514 386-653 (974)
43 KOG0585 Ca2+/calmodulin-depend 100.0 1.1E-40 2.3E-45 329.8 16.3 269 219-512 91-378 (576)
44 cd05108 PTKc_EGFR Catalytic do 100.0 4.2E-40 9.1E-45 333.2 21.2 261 225-515 7-273 (316)
45 cd05054 PTKc_VEGFR Catalytic d 100.0 2.7E-40 5.9E-45 337.6 20.0 265 222-512 4-335 (337)
46 KOG0201 Serine/threonine prote 100.0 2.8E-41 6.1E-46 331.8 11.9 249 226-506 14-263 (467)
47 cd05612 STKc_PRKX_like Catalyt 100.0 3E-40 6.4E-45 330.4 18.4 248 225-508 1-256 (291)
48 KOG1989 ARK protein kinase fam 100.0 6.9E-40 1.5E-44 348.0 21.0 275 223-520 35-321 (738)
49 cd05072 PTKc_Lyn Catalytic dom 100.0 7E-40 1.5E-44 321.9 19.3 256 224-510 5-261 (261)
50 cd05148 PTKc_Srm_Brk Catalytic 100.0 5.9E-40 1.3E-44 322.2 18.6 258 222-510 3-261 (261)
51 cd05052 PTKc_Abl Catalytic dom 100.0 1.1E-39 2.4E-44 321.1 20.5 255 225-510 6-262 (263)
52 cd05068 PTKc_Frk_like Catalyti 100.0 1.3E-39 2.8E-44 320.1 20.7 257 223-510 4-261 (261)
53 KOG0663 Protein kinase PITSLRE 100.0 4.4E-40 9.5E-45 312.7 16.5 270 225-506 76-361 (419)
54 cd07848 STKc_CDKL5 Catalytic d 100.0 1.2E-39 2.7E-44 324.8 20.7 269 225-506 1-284 (287)
55 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.3E-39 2.9E-44 325.2 20.8 268 225-506 5-285 (288)
56 PLN00113 leucine-rich repeat r 100.0 1E-38 2.2E-43 369.5 31.4 265 224-515 689-956 (968)
57 cd05049 PTKc_Trk Catalytic dom 100.0 1.4E-39 3E-44 323.0 20.6 257 225-509 5-280 (280)
58 cd05033 PTKc_EphR Catalytic do 100.0 2.2E-39 4.7E-44 319.4 21.8 258 225-511 4-266 (266)
59 KOG2345 Serine/threonine prote 100.0 1.9E-40 4.1E-45 303.6 13.0 270 225-511 21-301 (302)
60 cd05571 STKc_PKB Catalytic dom 100.0 6.8E-40 1.5E-44 332.8 18.5 243 231-506 1-251 (323)
61 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3E-39 6.4E-44 321.5 22.6 271 228-511 7-282 (283)
62 cd05062 PTKc_IGF-1R Catalytic 100.0 1.1E-39 2.5E-44 323.5 18.9 260 222-509 3-277 (277)
63 KOG0588 Serine/threonine prote 100.0 3.2E-40 7E-45 337.8 15.3 251 227-511 14-268 (786)
64 KOG0580 Serine/threonine prote 100.0 1.7E-40 3.7E-45 302.6 11.4 253 225-510 22-277 (281)
65 cd05111 PTK_HER3 Pseudokinase 100.0 3.5E-39 7.6E-44 320.6 21.8 260 225-514 7-272 (279)
66 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.5E-39 5.4E-44 317.1 20.4 252 225-508 4-256 (256)
67 PTZ00263 protein kinase A cata 100.0 7.4E-40 1.6E-44 333.4 17.2 246 225-506 18-271 (329)
68 KOG0597 Serine-threonine prote 100.0 4E-40 8.7E-45 330.9 14.7 248 225-506 2-251 (808)
69 cd05061 PTKc_InsR Catalytic do 100.0 2.6E-39 5.6E-44 323.0 20.6 262 221-510 2-278 (288)
70 cd06650 PKc_MEK1 Catalytic dom 100.0 5.1E-39 1.1E-43 327.7 22.8 201 224-439 4-205 (333)
71 KOG0611 Predicted serine/threo 100.0 4.1E-40 8.8E-45 319.0 13.8 251 225-511 53-308 (668)
72 cd08228 STKc_Nek6 Catalytic do 100.0 6.4E-39 1.4E-43 316.0 22.3 260 225-511 2-266 (267)
73 cd07862 STKc_CDK6 Catalytic do 100.0 5.4E-39 1.2E-43 320.7 22.0 271 225-505 1-286 (290)
74 PLN00034 mitogen-activated pro 100.0 3.1E-39 6.8E-44 332.0 20.8 250 226-508 75-330 (353)
75 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.9E-39 4.2E-44 330.9 19.0 253 225-506 1-257 (333)
76 cd05090 PTKc_Ror1 Catalytic do 100.0 3.9E-39 8.4E-44 320.7 20.7 257 225-509 5-282 (283)
77 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.6E-39 7.7E-44 316.8 19.8 257 222-510 3-260 (260)
78 KOG0694 Serine/threonine prote 100.0 1.2E-39 2.6E-44 336.2 17.0 243 224-500 367-613 (694)
79 cd05084 PTKc_Fes Catalytic dom 100.0 5.8E-39 1.3E-43 313.7 21.1 249 231-508 1-251 (252)
80 cd07869 STKc_PFTAIRE1 Catalyti 100.0 7.8E-39 1.7E-43 322.0 22.4 268 224-505 4-287 (303)
81 cd05593 STKc_PKB_gamma Catalyt 100.0 3.5E-39 7.5E-44 328.3 19.7 243 231-506 1-251 (328)
82 KOG0605 NDR and related serine 100.0 2.1E-39 4.5E-44 326.0 17.6 251 223-499 139-435 (550)
83 cd05585 STKc_YPK1_like Catalyt 100.0 1.9E-39 4.1E-44 327.9 17.5 241 233-506 1-247 (312)
84 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.3E-39 1.1E-43 315.6 20.1 254 224-509 5-259 (260)
85 cd05595 STKc_PKB_beta Catalyti 100.0 3.3E-39 7.1E-44 327.8 19.1 243 231-506 1-251 (323)
86 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.1E-39 8.8E-44 319.6 19.4 259 223-509 4-277 (277)
87 cd05053 PTKc_FGFR Catalytic do 100.0 2.8E-39 6.1E-44 323.2 18.4 263 221-511 8-292 (293)
88 cd05055 PTKc_PDGFR Catalytic d 100.0 6.5E-39 1.4E-43 322.5 21.0 260 224-510 34-301 (302)
89 cd05071 PTKc_Src Catalytic dom 100.0 6.6E-39 1.4E-43 315.5 20.7 255 224-510 5-260 (262)
90 cd05045 PTKc_RET Catalytic dom 100.0 7E-39 1.5E-43 320.1 21.1 260 226-513 1-289 (290)
91 cd05107 PTKc_PDGFR_beta Cataly 100.0 5.1E-39 1.1E-43 334.6 20.6 265 220-511 32-400 (401)
92 cd05043 PTK_Ryk Pseudokinase d 100.0 4.8E-39 1E-43 319.4 19.5 263 224-513 5-279 (280)
93 cd05109 PTKc_HER2 Catalytic do 100.0 9.2E-39 2E-43 317.3 21.2 261 225-515 7-273 (279)
94 cd06637 STKc_TNIK Catalytic do 100.0 6.6E-39 1.4E-43 316.8 20.0 259 221-506 2-269 (272)
95 PTZ00426 cAMP-dependent protei 100.0 2.5E-39 5.5E-44 330.7 17.4 246 225-506 30-284 (340)
96 cd05103 PTKc_VEGFR2 Catalytic 100.0 7.2E-39 1.6E-43 328.0 20.7 265 223-513 5-342 (343)
97 cd07859 STKc_TDY_MAPK_plant Ca 100.0 7.9E-39 1.7E-43 326.6 20.9 278 226-512 1-298 (338)
98 cd05059 PTKc_Tec_like Catalyti 100.0 8.7E-39 1.9E-43 313.4 20.3 251 226-508 5-256 (256)
99 KOG0199 ACK and related non-re 100.0 1.2E-39 2.7E-44 333.9 14.5 258 228-513 113-376 (1039)
100 cd05069 PTKc_Yes Catalytic dom 100.0 1.1E-38 2.4E-43 313.4 20.8 253 225-509 6-259 (260)
101 cd05605 STKc_GRK4_like Catalyt 100.0 8.1E-39 1.7E-43 319.0 20.1 253 226-506 1-261 (285)
102 cd05115 PTKc_Zap-70 Catalytic 100.0 1.5E-38 3.2E-43 312.3 21.5 249 233-510 3-255 (257)
103 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7.8E-39 1.7E-43 313.9 19.5 251 226-508 5-256 (256)
104 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.2E-38 9E-43 309.9 24.8 259 225-511 2-266 (267)
105 cd05098 PTKc_FGFR1 Catalytic d 100.0 5.4E-39 1.2E-43 323.7 18.5 263 224-514 17-303 (307)
106 cd05075 PTKc_Axl Catalytic dom 100.0 2.1E-38 4.7E-43 313.1 22.1 259 228-510 2-271 (272)
107 cd05584 STKc_p70S6K Catalytic 100.0 8.3E-39 1.8E-43 324.8 19.7 243 231-506 2-256 (323)
108 cd05091 PTKc_Ror2 Catalytic do 100.0 7.4E-39 1.6E-43 318.6 18.7 255 227-509 7-282 (283)
109 cd05088 PTKc_Tie2 Catalytic do 100.0 9.1E-39 2E-43 321.6 19.5 261 225-516 7-286 (303)
110 cd08229 STKc_Nek7 Catalytic do 100.0 3.4E-38 7.3E-43 310.8 23.1 260 225-511 2-266 (267)
111 cd05116 PTKc_Syk Catalytic dom 100.0 1.9E-38 4.2E-43 311.2 21.2 249 232-510 2-255 (257)
112 cd05085 PTKc_Fer Catalytic dom 100.0 2.7E-38 5.9E-43 308.4 21.9 248 231-508 1-249 (250)
113 cd05089 PTKc_Tie1 Catalytic do 100.0 1.4E-38 3.1E-43 319.1 20.3 260 225-515 2-280 (297)
114 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.7E-38 3.6E-43 319.7 20.8 262 224-513 14-299 (304)
115 cd05032 PTKc_InsR_like Catalyt 100.0 8.7E-39 1.9E-43 316.8 18.5 259 223-509 4-277 (277)
116 cd05094 PTKc_TrkC Catalytic do 100.0 1.7E-38 3.7E-43 317.5 20.7 260 225-513 5-285 (291)
117 cd05034 PTKc_Src_like Catalyti 100.0 1.6E-38 3.4E-43 312.2 19.8 257 222-509 3-260 (261)
118 cd05614 STKc_MSK2_N N-terminal 100.0 1.3E-38 2.8E-43 324.7 19.8 253 226-506 1-267 (332)
119 cd05093 PTKc_TrkB Catalytic do 100.0 1.8E-38 3.9E-43 316.9 20.4 260 225-513 5-282 (288)
120 KOG1024 Receptor-like protein 100.0 1.1E-38 2.4E-43 308.1 18.0 270 216-512 275-557 (563)
121 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.3E-38 2.9E-43 322.0 19.4 264 223-514 10-297 (314)
122 cd08529 STKc_FA2-like Catalyti 100.0 3.7E-38 8.1E-43 308.2 22.0 251 226-506 1-253 (256)
123 cd05035 PTKc_Axl_like Catalyti 100.0 4.9E-38 1.1E-42 310.4 23.0 260 227-510 1-272 (273)
124 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.2E-39 9E-44 330.5 15.8 256 225-506 1-285 (350)
125 cd05608 STKc_GRK1 Catalytic do 100.0 2.8E-38 6.1E-43 314.3 21.2 247 233-506 1-257 (280)
126 cd05097 PTKc_DDR_like Catalyti 100.0 1.4E-38 3.1E-43 318.7 19.3 265 224-509 4-295 (295)
127 PHA03212 serine/threonine kina 100.0 2.1E-38 4.5E-43 329.6 21.1 262 224-506 91-376 (391)
128 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.2E-38 6.9E-43 311.3 21.2 260 224-511 4-268 (268)
129 cd05599 STKc_NDR_like Catalyti 100.0 7.2E-39 1.6E-43 330.7 17.2 256 225-506 1-296 (364)
130 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.5E-38 9.8E-43 310.7 22.2 254 231-508 1-268 (269)
131 cd05589 STKc_PKN Catalytic dom 100.0 1.5E-38 3.3E-43 323.1 19.3 246 227-506 1-257 (324)
132 cd05596 STKc_ROCK Catalytic do 100.0 7.4E-39 1.6E-43 331.2 17.2 255 221-506 39-304 (370)
133 cd05594 STKc_PKB_alpha Catalyt 100.0 7.2E-39 1.6E-43 325.5 16.7 243 231-506 1-252 (325)
134 cd05066 PTKc_EphR_A Catalytic 100.0 3.5E-38 7.5E-43 311.1 21.0 258 225-510 4-266 (267)
135 cd05039 PTKc_Csk_like Catalyti 100.0 4.4E-38 9.6E-43 308.2 21.6 250 225-510 6-256 (256)
136 cd05082 PTKc_Csk Catalytic dom 100.0 4.2E-38 9.2E-43 308.4 21.4 250 225-510 6-256 (256)
137 PTZ00283 serine/threonine prot 100.0 1.6E-38 3.5E-43 339.7 20.0 264 219-506 26-297 (496)
138 cd08219 STKc_Nek3 Catalytic do 100.0 3.4E-38 7.3E-43 308.8 20.7 251 226-506 1-252 (255)
139 cd05607 STKc_GRK7 Catalytic do 100.0 3.7E-38 8.1E-43 312.9 20.8 246 233-505 1-249 (277)
140 cd05065 PTKc_EphR_B Catalytic 100.0 3.2E-38 7E-43 311.6 20.0 259 226-510 5-268 (269)
141 cd06625 STKc_MEKK3_like Cataly 100.0 8.4E-38 1.8E-42 307.2 22.9 255 225-507 2-261 (263)
142 cd05050 PTKc_Musk Catalytic do 100.0 2.7E-38 5.9E-43 315.4 19.6 258 224-509 4-288 (288)
143 cd05590 STKc_nPKC_eta Catalyti 100.0 1.7E-38 3.8E-43 322.0 18.4 243 231-506 1-253 (320)
144 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 5.9E-38 1.3E-42 312.2 21.9 275 225-510 4-283 (284)
145 cd05588 STKc_aPKC Catalytic do 100.0 2.7E-38 6E-43 321.8 19.9 250 231-506 1-262 (329)
146 cd05060 PTKc_Syk_like Catalyti 100.0 7E-38 1.5E-42 307.1 22.0 251 231-511 1-256 (257)
147 cd06646 STKc_MAP4K5 Catalytic 100.0 8.1E-38 1.7E-42 308.3 22.6 254 225-507 9-266 (267)
148 cd05051 PTKc_DDR Catalytic dom 100.0 4.4E-38 9.5E-43 315.0 21.0 265 224-509 4-296 (296)
149 cd06615 PKc_MEK Catalytic doma 100.0 8.9E-38 1.9E-42 315.1 23.2 268 225-509 1-290 (308)
150 cd05042 PTKc_Aatyk Catalytic d 100.0 6.8E-38 1.5E-42 309.3 21.8 253 232-508 2-268 (269)
151 cd05591 STKc_nPKC_epsilon Cata 100.0 1.8E-38 4E-43 322.0 18.1 243 231-506 1-254 (321)
152 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.1E-38 8.9E-43 317.6 20.4 268 225-506 6-286 (309)
153 cd05626 STKc_LATS2 Catalytic d 100.0 2.4E-38 5.2E-43 328.8 19.2 256 226-506 2-305 (381)
154 PRK13184 pknD serine/threonine 100.0 9.4E-38 2E-42 343.8 24.8 266 225-513 2-293 (932)
155 PTZ00036 glycogen synthase kin 100.0 2.8E-38 6.1E-43 333.7 19.8 269 223-506 64-351 (440)
156 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5.8E-38 1.3E-42 312.5 20.9 274 226-510 5-283 (284)
157 cd05592 STKc_nPKC_theta_delta 100.0 4.3E-38 9.3E-43 318.6 20.3 242 231-505 1-247 (316)
158 cd05618 STKc_aPKC_iota Catalyt 100.0 4E-38 8.8E-43 320.6 20.2 250 231-506 1-262 (329)
159 cd05040 PTKc_Ack_like Catalyti 100.0 6.7E-38 1.5E-42 306.9 21.0 251 231-508 1-256 (257)
160 cd05073 PTKc_Hck Catalytic dom 100.0 6.1E-38 1.3E-42 308.1 20.7 256 223-510 4-260 (260)
161 cd05628 STKc_NDR1 Catalytic do 100.0 3.4E-38 7.3E-43 325.6 19.8 206 225-439 1-239 (363)
162 cd05047 PTKc_Tie Catalytic dom 100.0 7.6E-38 1.6E-42 309.3 21.5 250 231-511 1-269 (270)
163 cd05587 STKc_cPKC Catalytic do 100.0 2.6E-38 5.7E-43 321.3 18.5 248 226-506 1-257 (324)
164 cd06619 PKc_MKK5 Catalytic dom 100.0 1.2E-37 2.5E-42 309.6 22.8 253 226-508 2-255 (279)
165 cd05616 STKc_cPKC_beta Catalyt 100.0 2.4E-38 5.3E-43 321.4 18.2 247 226-505 1-256 (323)
166 cd05621 STKc_ROCK2 Catalytic d 100.0 1.8E-38 4E-43 328.0 17.4 257 219-506 37-304 (370)
167 cd05058 PTKc_Met_Ron Catalytic 100.0 1E-37 2.2E-42 306.6 21.8 255 231-511 1-260 (262)
168 cd05601 STKc_CRIK Catalytic do 100.0 7.6E-39 1.6E-43 326.1 14.3 254 225-506 1-263 (330)
169 KOG0658 Glycogen synthase kina 100.0 6.6E-39 1.4E-43 309.7 13.1 272 227-513 26-315 (364)
170 cd05095 PTKc_DDR2 Catalytic do 100.0 7E-38 1.5E-42 313.9 21.0 265 224-509 4-296 (296)
171 KOG0589 Serine/threonine prote 100.0 7.2E-39 1.6E-43 322.8 13.7 253 225-506 4-258 (426)
172 KOG0660 Mitogen-activated prot 100.0 9.7E-39 2.1E-43 308.0 14.0 274 223-506 20-310 (359)
173 cd05630 STKc_GRK6 Catalytic do 100.0 8.3E-38 1.8E-42 311.8 21.0 252 227-506 2-261 (285)
174 cd05570 STKc_PKC Catalytic dom 100.0 4.6E-38 9.9E-43 318.7 19.2 243 231-506 1-252 (318)
175 cd05629 STKc_NDR_like_fungal C 100.0 2E-38 4.3E-43 329.0 17.0 257 225-507 1-306 (377)
176 cd05582 STKc_RSK_N N-terminal 100.0 8.8E-39 1.9E-43 323.9 13.9 239 231-502 2-245 (318)
177 cd05619 STKc_nPKC_theta Cataly 100.0 8E-38 1.7E-42 316.6 20.7 242 231-505 1-247 (316)
178 cd07863 STKc_CDK4 Catalytic do 100.0 1.1E-37 2.3E-42 310.9 21.2 271 226-506 1-285 (288)
179 cd05092 PTKc_TrkA Catalytic do 100.0 1E-37 2.2E-42 310.1 20.8 256 225-509 5-280 (280)
180 PTZ00267 NIMA-related protein 100.0 1E-37 2.2E-42 333.0 22.2 250 227-505 69-322 (478)
181 cd00192 PTKc Catalytic domain 100.0 1.8E-37 3.8E-42 303.7 22.0 250 231-508 1-262 (262)
182 cd05056 PTKc_FAK Catalytic dom 100.0 1.6E-37 3.4E-42 306.9 21.6 259 225-514 6-269 (270)
183 cd05100 PTKc_FGFR3 Catalytic d 100.0 8.1E-38 1.8E-42 319.1 20.1 264 223-514 10-297 (334)
184 cd05602 STKc_SGK1 Catalytic do 100.0 3.2E-38 6.8E-43 320.8 17.0 241 231-504 1-245 (325)
185 cd05057 PTKc_EGFR_like Catalyt 100.0 1.6E-37 3.4E-42 308.4 21.6 261 225-515 7-273 (279)
186 cd05041 PTKc_Fes_like Catalyti 100.0 1.9E-37 4E-42 302.7 21.7 249 231-508 1-250 (251)
187 cd05620 STKc_nPKC_delta Cataly 100.0 6.7E-38 1.4E-42 317.2 19.2 242 231-505 1-247 (316)
188 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.1E-37 2.5E-42 309.9 20.5 265 215-506 6-279 (282)
189 cd05632 STKc_GRK5 Catalytic do 100.0 1.6E-37 3.4E-42 309.8 21.5 252 227-506 2-261 (285)
190 cd05044 PTKc_c-ros Catalytic d 100.0 1E-37 2.2E-42 307.8 19.8 251 231-509 1-269 (269)
191 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.3E-37 2.8E-42 310.0 20.7 264 225-511 5-271 (284)
192 KOG0594 Protein kinase PCTAIRE 100.0 1E-37 2.2E-42 302.0 19.2 277 226-511 12-309 (323)
193 KOG0610 Putative serine/threon 100.0 9.6E-38 2.1E-42 304.8 19.1 256 226-505 78-391 (459)
194 cd06654 STKc_PAK1 Catalytic do 100.0 2.5E-37 5.5E-42 310.0 22.8 250 225-506 20-270 (296)
195 cd05046 PTK_CCK4 Pseudokinase 100.0 1.4E-37 3.1E-42 307.8 20.7 257 225-509 5-275 (275)
196 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.2E-37 2.5E-42 309.0 20.0 247 227-506 6-253 (277)
197 cd05575 STKc_SGK Catalytic dom 100.0 5.8E-38 1.3E-42 318.6 18.2 238 231-501 1-242 (323)
198 cd05625 STKc_LATS1 Catalytic d 100.0 5.3E-38 1.2E-42 326.4 18.1 255 226-506 2-305 (382)
199 cd06609 STKc_MST3_like Catalyt 100.0 2.6E-37 5.7E-42 305.9 22.0 250 225-506 1-251 (274)
200 cd06640 STKc_MST4 Catalytic do 100.0 4E-37 8.6E-42 305.3 23.4 250 226-508 5-255 (277)
201 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.9E-37 4E-42 308.1 20.9 275 226-511 5-284 (284)
202 cd05598 STKc_LATS Catalytic do 100.0 3.9E-38 8.5E-43 326.7 16.4 256 225-506 1-301 (376)
203 cd05622 STKc_ROCK1 Catalytic d 100.0 6.7E-38 1.5E-42 324.0 18.0 261 218-507 36-305 (371)
204 cd05615 STKc_cPKC_alpha Cataly 100.0 9.9E-38 2.2E-42 316.9 19.0 242 226-500 1-246 (323)
205 cd05617 STKc_aPKC_zeta Catalyt 100.0 9.8E-38 2.1E-42 317.5 18.9 250 231-506 1-260 (327)
206 cd06624 STKc_ASK Catalytic dom 100.0 3.5E-37 7.5E-42 304.1 22.2 257 220-506 3-265 (268)
207 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.6E-37 1E-41 303.5 23.0 253 232-508 2-267 (268)
208 cd05110 PTKc_HER4 Catalytic do 100.0 2.1E-37 4.5E-42 311.7 20.8 261 225-515 7-273 (303)
209 cd06612 STKc_MST1_2 Catalytic 100.0 4.2E-37 9.1E-42 300.8 22.3 251 224-506 2-253 (256)
210 cd06638 STKc_myosinIIIA Cataly 100.0 2.5E-37 5.4E-42 307.9 20.8 267 215-507 8-284 (286)
211 cd07874 STKc_JNK3 Catalytic do 100.0 2.9E-37 6.4E-42 317.6 21.7 270 223-506 15-311 (355)
212 cd06610 STKc_OSR1_SPAK Catalyt 100.0 6.7E-37 1.5E-41 301.1 23.3 260 225-506 1-264 (267)
213 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.2E-37 6.8E-42 309.9 21.4 269 225-507 6-287 (301)
214 cd07876 STKc_JNK2 Catalytic do 100.0 3.8E-37 8.2E-42 317.3 22.5 271 223-507 19-316 (359)
215 cd06651 STKc_MEKK3 Catalytic d 100.0 5.8E-37 1.2E-41 302.2 22.8 254 225-505 2-260 (266)
216 cd07853 STKc_NLK Catalytic dom 100.0 1.9E-37 4.1E-42 321.1 20.1 271 226-506 1-288 (372)
217 cd05112 PTKc_Itk Catalytic dom 100.0 3.3E-37 7.1E-42 301.9 20.6 252 225-508 4-256 (256)
218 cd08227 PK_STRAD_alpha Pseudok 100.0 8.5E-37 1.8E-41 310.6 24.1 270 230-506 3-307 (327)
219 cd06652 STKc_MEKK2 Catalytic d 100.0 7.3E-37 1.6E-41 301.2 22.7 255 225-506 2-261 (265)
220 cd06628 STKc_MAPKKK_Byr2_like 100.0 7.4E-37 1.6E-41 301.3 22.8 254 226-506 1-264 (267)
221 cd06631 STKc_YSK4 Catalytic do 100.0 6.7E-37 1.5E-41 301.4 22.2 255 226-505 1-261 (265)
222 cd05083 PTKc_Chk Catalytic dom 100.0 3.1E-37 6.7E-42 301.9 19.7 247 225-509 6-253 (254)
223 cd08221 STKc_Nek9 Catalytic do 100.0 6.1E-37 1.3E-41 300.0 21.6 252 226-507 1-254 (256)
224 cd08223 STKc_Nek4 Catalytic do 100.0 6.1E-37 1.3E-41 300.0 21.5 252 226-506 1-254 (257)
225 cd07868 STKc_CDK8 Catalytic do 100.0 6.7E-37 1.4E-41 309.8 22.5 199 230-439 6-219 (317)
226 cd05604 STKc_SGK3 Catalytic do 100.0 8.6E-38 1.9E-42 317.7 16.0 239 231-502 1-243 (325)
227 cd06639 STKc_myosinIIIB Cataly 100.0 3.7E-37 8E-42 307.7 20.3 266 215-506 12-287 (291)
228 PHA03211 serine/threonine kina 100.0 5.3E-37 1.1E-41 323.5 22.5 264 224-506 168-455 (461)
229 cd06656 STKc_PAK3 Catalytic do 100.0 9.3E-37 2E-41 306.1 23.0 251 224-506 18-269 (297)
230 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 7.2E-37 1.6E-41 304.7 22.0 253 226-507 2-263 (286)
231 cd05574 STKc_phototropin_like 100.0 8E-37 1.7E-41 309.1 22.6 258 225-506 1-289 (316)
232 cd07875 STKc_JNK1 Catalytic do 100.0 6.4E-37 1.4E-41 316.2 22.1 270 223-506 22-318 (364)
233 cd07861 STKc_CDK1_euk Catalyti 100.0 6E-37 1.3E-41 304.9 21.1 267 226-506 1-282 (285)
234 PTZ00284 protein kinase; Provi 100.0 1.2E-36 2.6E-41 324.3 24.6 278 217-513 121-447 (467)
235 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 7.6E-37 1.6E-41 301.0 21.3 240 231-508 1-262 (262)
236 cd05603 STKc_SGK2 Catalytic do 100.0 1.8E-37 3.9E-42 314.7 17.1 238 231-501 1-242 (321)
237 cd06608 STKc_myosinIII_like Ca 100.0 6E-37 1.3E-41 302.6 20.3 259 222-506 3-272 (275)
238 PHA03207 serine/threonine kina 100.0 3.3E-37 7.2E-42 321.4 19.3 265 224-507 91-376 (392)
239 cd06645 STKc_MAP4K3 Catalytic 100.0 6.5E-37 1.4E-41 301.8 20.4 253 225-506 9-265 (267)
240 cd05627 STKc_NDR2 Catalytic do 100.0 1.2E-37 2.7E-42 321.0 15.8 257 225-506 1-293 (360)
241 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.6E-37 1.2E-41 304.1 19.9 239 232-508 2-274 (274)
242 smart00219 TyrKc Tyrosine kina 100.0 9.5E-37 2.1E-41 298.3 21.3 252 227-507 1-258 (258)
243 cd06613 STKc_MAP4K3_like Catal 100.0 1.6E-36 3.4E-41 297.8 22.8 254 224-505 2-259 (262)
244 cd06655 STKc_PAK2 Catalytic do 100.0 7.9E-37 1.7E-41 306.4 21.1 250 225-506 19-269 (296)
245 KOG0200 Fibroblast/platelet-de 100.0 2E-37 4.3E-42 337.6 18.1 269 219-513 290-582 (609)
246 cd08218 STKc_Nek1 Catalytic do 100.0 7.2E-37 1.6E-41 299.4 20.3 251 226-506 1-253 (256)
247 KOG0032 Ca2+/calmodulin-depend 100.0 9E-37 2E-41 311.6 21.6 255 223-508 33-295 (382)
248 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.6E-36 5.5E-41 301.2 24.4 261 225-508 1-268 (287)
249 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.8E-36 3.9E-41 296.9 22.7 238 231-508 1-259 (259)
250 cd05597 STKc_DMPK_like Catalyt 100.0 6.2E-37 1.3E-41 312.2 19.9 256 225-506 1-266 (331)
251 PTZ00266 NIMA-related protein 100.0 1E-36 2.2E-41 336.9 22.9 268 219-512 7-303 (1021)
252 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.6E-36 3.4E-41 301.9 22.0 268 225-506 1-283 (286)
253 cd07846 STKc_CDKL2_3 Catalytic 100.0 5.5E-37 1.2E-41 305.3 18.6 268 225-506 1-283 (286)
254 PHA03209 serine/threonine kina 100.0 1.1E-36 2.4E-41 313.6 21.3 193 223-437 64-257 (357)
255 cd08528 STKc_Nek10 Catalytic d 100.0 1.7E-36 3.7E-41 299.1 21.7 253 226-508 1-268 (269)
256 cd08220 STKc_Nek8 Catalytic do 100.0 1.7E-36 3.7E-41 296.5 21.5 250 226-506 1-253 (256)
257 cd06917 STKc_NAK1_like Catalyt 100.0 2.5E-36 5.4E-41 299.3 22.9 249 226-506 2-255 (277)
258 cd08217 STKc_Nek2 Catalytic do 100.0 1.6E-36 3.5E-41 297.7 21.3 253 226-506 1-262 (265)
259 cd06632 STKc_MEKK1_plant Catal 100.0 2E-36 4.3E-41 296.2 21.8 249 226-506 1-255 (258)
260 cd06644 STKc_STK10_LOK Catalyt 100.0 2.3E-36 4.9E-41 302.3 22.7 252 225-506 12-269 (292)
261 PF00069 Pkinase: Protein kina 100.0 2.9E-37 6.2E-42 302.5 15.8 254 227-506 1-257 (260)
262 cd05623 STKc_MRCK_alpha Cataly 100.0 4.4E-37 9.6E-42 313.4 17.7 256 225-506 1-266 (332)
263 cd07839 STKc_CDK5 Catalytic do 100.0 8.7E-37 1.9E-41 303.7 19.1 267 226-506 1-281 (284)
264 cd07867 STKc_CDC2L6 Catalytic 100.0 1.8E-36 4E-41 306.4 21.7 198 231-439 7-219 (317)
265 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.4E-36 5.3E-41 298.6 21.9 256 226-506 2-269 (272)
266 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.5E-36 5.5E-41 298.5 21.8 261 227-511 1-273 (273)
267 KOG0599 Phosphorylase kinase g 100.0 6.4E-38 1.4E-42 290.1 9.7 265 221-515 13-294 (411)
268 cd06643 STKc_SLK Catalytic dom 100.0 1.7E-36 3.7E-41 301.5 20.7 252 227-508 7-264 (282)
269 cd06605 PKc_MAPKK Catalytic do 100.0 1.7E-36 3.6E-41 298.3 20.2 253 226-506 2-257 (265)
270 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 5.2E-37 1.1E-41 301.3 16.6 240 231-508 1-258 (258)
271 cd06641 STKc_MST3 Catalytic do 100.0 2.7E-36 5.9E-41 299.3 21.9 247 227-506 6-253 (277)
272 cd06630 STKc_MEKK1 Catalytic d 100.0 4.8E-36 1E-40 295.5 23.3 256 226-505 1-263 (268)
273 cd05624 STKc_MRCK_beta Catalyt 100.0 5.5E-37 1.2E-41 312.5 17.1 256 225-506 1-266 (331)
274 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.2E-36 2.6E-41 311.6 19.5 269 222-506 12-298 (343)
275 cd06611 STKc_SLK_like Catalyti 100.0 1.6E-36 3.5E-41 301.3 19.6 253 224-506 4-262 (280)
276 cd07844 STKc_PCTAIRE_like Cata 100.0 3E-36 6.4E-41 301.1 21.6 268 225-506 5-288 (291)
277 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3E-36 6.4E-41 301.2 21.4 269 223-505 3-287 (291)
278 cd06617 PKc_MKK3_6 Catalytic d 100.0 3E-36 6.6E-41 299.5 20.7 252 225-506 1-261 (283)
279 cd06623 PKc_MAPKK_plant_like C 100.0 5.4E-36 1.2E-40 294.2 22.0 253 225-506 1-256 (264)
280 cd06626 STKc_MEKK4 Catalytic d 100.0 9.6E-36 2.1E-40 292.5 22.8 255 226-505 1-260 (264)
281 cd06616 PKc_MKK4 Catalytic dom 100.0 2.8E-36 6E-41 300.8 19.2 254 226-506 5-267 (288)
282 cd07832 STKc_CCRK Catalytic do 100.0 6.5E-36 1.4E-40 297.5 21.6 267 226-506 1-282 (286)
283 cd06658 STKc_PAK5 Catalytic do 100.0 2.9E-36 6.3E-41 301.8 19.1 247 228-506 25-272 (292)
284 KOG0574 STE20-like serine/thre 100.0 4.5E-38 9.8E-43 294.5 5.6 248 227-506 35-283 (502)
285 KOG0577 Serine/threonine prote 100.0 2.1E-37 4.6E-42 312.3 10.7 246 226-506 27-278 (948)
286 cd07833 STKc_CDKL Catalytic do 100.0 4.7E-36 1E-40 298.8 20.4 269 225-506 1-285 (288)
287 cd05586 STKc_Sck1_like Catalyt 100.0 9.9E-37 2.2E-41 310.5 15.9 242 233-506 1-253 (330)
288 cd07860 STKc_CDK2_3 Catalytic 100.0 3.1E-36 6.7E-41 299.7 19.1 267 226-506 1-281 (284)
289 KOG0033 Ca2+/calmodulin-depend 100.0 3.2E-38 6.9E-43 288.1 4.2 253 224-508 10-269 (355)
290 cd05609 STKc_MAST Catalytic do 100.0 1.3E-35 2.7E-40 298.9 23.3 260 225-509 1-273 (305)
291 cd06659 STKc_PAK6 Catalytic do 100.0 4.9E-36 1.1E-40 300.9 19.9 250 229-510 25-275 (297)
292 cd06647 STKc_PAK_I Catalytic d 100.0 1.1E-35 2.5E-40 297.6 22.5 250 225-506 19-269 (293)
293 KOG4279 Serine/threonine prote 100.0 7.1E-37 1.5E-41 313.0 13.9 245 231-505 581-831 (1226)
294 cd05580 STKc_PKA Catalytic dom 100.0 6.6E-36 1.4E-40 298.7 20.7 246 225-506 1-254 (290)
295 cd08225 STKc_Nek5 Catalytic do 100.0 4.5E-36 9.7E-41 293.7 19.1 251 226-506 1-254 (257)
296 cd06607 STKc_TAO Catalytic dom 100.0 1.5E-35 3.2E-40 298.7 23.2 250 224-508 14-269 (307)
297 cd06614 STKc_PAK Catalytic dom 100.0 1E-35 2.2E-40 296.6 21.7 254 222-506 16-270 (286)
298 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.3E-35 2.8E-40 292.3 22.1 255 225-506 2-261 (264)
299 cd07841 STKc_CDK7 Catalytic do 100.0 1.4E-35 3.1E-40 297.1 22.5 267 226-506 1-282 (298)
300 cd07836 STKc_Pho85 Catalytic d 100.0 1.5E-35 3.3E-40 294.6 22.2 268 226-506 1-281 (284)
301 cd07843 STKc_CDC2L1 Catalytic 100.0 1.1E-35 2.3E-40 297.4 21.2 270 225-506 5-290 (293)
302 PHA02882 putative serine/threo 100.0 2.5E-35 5.3E-40 295.3 23.6 268 224-508 11-294 (294)
303 cd05577 STKc_GRK Catalytic dom 100.0 2E-35 4.3E-40 293.1 21.5 245 233-505 1-253 (277)
304 cd07835 STKc_CDK1_like Catalyt 100.0 2.1E-35 4.5E-40 293.6 21.6 266 227-506 1-280 (283)
305 KOG0596 Dual specificity; seri 100.0 1.4E-36 3E-41 305.3 13.0 253 225-506 361-627 (677)
306 cd07852 STKc_MAPK15 Catalytic 100.0 1.3E-35 2.8E-40 303.2 20.3 279 223-510 5-301 (337)
307 cd05572 STKc_cGK_PKG Catalytic 100.0 2.1E-35 4.5E-40 290.3 20.7 243 233-505 1-251 (262)
308 cd06648 STKc_PAK_II Catalytic 100.0 3E-35 6.5E-40 293.3 22.2 248 227-506 21-269 (285)
309 cd05578 STKc_Yank1 Catalytic d 100.0 7.4E-36 1.6E-40 292.8 17.4 248 226-504 1-253 (258)
310 cd07837 STKc_CdkB_plant Cataly 100.0 2.4E-35 5.2E-40 295.0 21.4 272 225-506 1-291 (295)
311 cd06635 STKc_TAO1 Catalytic do 100.0 4.3E-35 9.4E-40 296.7 23.5 253 227-514 27-285 (317)
312 cd05633 STKc_GRK3 Catalytic do 100.0 2.7E-35 5.9E-40 292.7 21.2 244 232-507 1-256 (279)
313 cd07850 STKc_JNK Catalytic dom 100.0 4E-35 8.8E-40 301.5 23.0 270 223-506 14-311 (353)
314 cd08226 PK_STRAD_beta Pseudoki 100.0 4.5E-35 9.9E-40 298.0 23.0 269 231-507 4-309 (328)
315 cd07849 STKc_ERK1_2_like Catal 100.0 1.7E-35 3.7E-40 302.2 19.8 279 224-511 4-299 (336)
316 cd07831 STKc_MOK Catalytic dom 100.0 4.9E-35 1.1E-39 290.5 22.6 264 227-506 1-279 (282)
317 KOG4717 Serine/threonine prote 100.0 1.1E-35 2.3E-40 295.8 17.7 251 226-509 19-273 (864)
318 cd07865 STKc_CDK9 Catalytic do 100.0 3.6E-35 7.8E-40 295.6 21.9 276 225-506 12-307 (310)
319 KOG0983 Mitogen-activated prot 100.0 7.3E-36 1.6E-40 276.7 15.3 249 229-506 96-349 (391)
320 cd07845 STKc_CDK10 Catalytic d 100.0 3.6E-35 7.9E-40 296.0 21.8 273 224-508 6-292 (309)
321 cd05122 PKc_STE Catalytic doma 100.0 4.7E-35 1E-39 284.6 21.7 250 226-506 1-251 (253)
322 KOG0667 Dual-specificity tyros 100.0 5.2E-36 1.1E-40 309.3 15.7 198 224-439 185-391 (586)
323 cd06606 STKc_MAPKKK Catalytic 100.0 5.9E-35 1.3E-39 285.1 22.4 255 226-506 1-257 (260)
324 KOG4250 TANK binding protein k 100.0 7.7E-36 1.7E-40 308.9 16.8 276 229-513 17-313 (732)
325 cd07830 STKc_MAK_like Catalyti 100.0 3.4E-35 7.4E-40 292.0 20.9 265 227-506 1-280 (283)
326 cd08216 PK_STRAD Pseudokinase 100.0 8.2E-35 1.8E-39 294.0 24.0 267 231-507 8-296 (314)
327 PLN00009 cyclin-dependent kina 100.0 3.4E-35 7.4E-40 293.9 20.9 268 225-506 2-284 (294)
328 cd05579 STKc_MAST_like Catalyt 100.0 3.4E-35 7.5E-40 288.2 19.3 248 233-508 1-256 (265)
329 cd07855 STKc_ERK5 Catalytic do 100.0 3.2E-35 7E-40 299.9 19.8 278 224-508 4-296 (334)
330 cd08215 STKc_Nek Catalytic dom 100.0 6.3E-35 1.4E-39 284.9 21.0 251 226-506 1-255 (258)
331 cd05611 STKc_Rim15_like Cataly 100.0 4.7E-35 1E-39 287.4 19.9 244 231-507 2-249 (260)
332 KOG0986 G protein-coupled rece 100.0 1.7E-36 3.6E-41 298.2 9.3 269 225-532 185-456 (591)
333 cd06618 PKc_MKK7 Catalytic dom 100.0 5.2E-35 1.1E-39 293.1 20.4 254 225-508 15-275 (296)
334 cd07840 STKc_CDK9_like Catalyt 100.0 4.6E-35 9.9E-40 291.2 19.7 269 227-506 1-284 (287)
335 cd08530 STKc_CNK2-like Catalyt 100.0 7.5E-35 1.6E-39 284.7 20.3 249 226-506 1-253 (256)
336 KOG1035 eIF-2alpha kinase GCN2 100.0 8.3E-36 1.8E-40 323.1 14.5 261 222-505 476-870 (1351)
337 cd07864 STKc_CDK12 Catalytic d 100.0 1.1E-34 2.4E-39 291.2 21.7 276 221-506 3-299 (302)
338 KOG0584 Serine/threonine prote 100.0 4E-36 8.6E-41 307.4 10.5 245 231-505 46-295 (632)
339 cd07838 STKc_CDK4_6_like Catal 100.0 2.6E-34 5.7E-39 285.9 23.3 269 227-506 1-284 (287)
340 cd05583 STKc_MSK_N N-terminal 100.0 1.1E-34 2.3E-39 289.5 20.2 257 226-510 1-267 (288)
341 KOG0586 Serine/threonine prote 100.0 3E-35 6.5E-40 300.7 16.3 252 222-509 53-309 (596)
342 cd05613 STKc_MSK1_N N-terminal 100.0 2E-34 4.4E-39 287.7 22.1 253 226-506 1-268 (290)
343 cd07842 STKc_CDK8_like Catalyt 100.0 3.3E-34 7.2E-39 289.5 23.7 273 226-506 1-313 (316)
344 KOG0579 Ste20-like serine/thre 100.0 3.2E-36 6.9E-41 305.4 8.8 249 228-506 35-289 (1187)
345 cd07858 STKc_TEY_MAPK_plant Ca 100.0 8.5E-35 1.8E-39 297.2 19.2 275 224-510 4-297 (337)
346 cd06657 STKc_PAK4 Catalytic do 100.0 1.8E-34 3.8E-39 288.8 21.1 244 231-506 26-270 (292)
347 cd06627 STKc_Cdc7_like Catalyt 100.0 2.5E-34 5.4E-39 280.5 21.5 248 226-505 1-250 (254)
348 cd05606 STKc_beta_ARK Catalyti 100.0 2.4E-34 5.2E-39 285.8 21.7 243 232-506 1-255 (278)
349 cd07879 STKc_p38delta_MAPK13 C 100.0 2.3E-34 5E-39 294.6 22.1 273 224-513 14-306 (342)
350 cd05581 STKc_PDK1 Catalytic do 100.0 6.9E-35 1.5E-39 288.8 17.5 253 225-505 1-276 (280)
351 cd06634 STKc_TAO2 Catalytic do 100.0 1.8E-34 4E-39 290.9 20.9 253 226-513 16-274 (308)
352 cd07866 STKc_BUR1 Catalytic do 100.0 1.7E-34 3.7E-39 290.8 20.4 278 224-506 7-308 (311)
353 cd06633 STKc_TAO3 Catalytic do 100.0 6.3E-34 1.4E-38 287.7 24.0 245 227-506 23-273 (313)
354 cd07857 STKc_MPK1 Catalytic do 100.0 2.9E-34 6.4E-39 292.6 21.7 273 226-506 1-292 (332)
355 PHA03390 pk1 serine/threonine- 100.0 5.5E-34 1.2E-38 281.5 22.9 248 219-505 8-261 (267)
356 PHA03210 serine/threonine kina 100.0 1E-34 2.2E-39 311.3 18.5 273 222-506 145-454 (501)
357 cd07834 STKc_MAPK Catalytic do 100.0 2.6E-34 5.6E-39 292.5 20.2 279 226-512 1-297 (330)
358 cd08222 STKc_Nek11 Catalytic d 100.0 2.7E-34 5.8E-39 282.0 18.9 250 226-506 1-257 (260)
359 cd05118 STKc_CMGC Catalytic do 100.0 4.6E-34 1E-38 283.5 20.7 266 227-506 1-280 (283)
360 cd07829 STKc_CDK_like Catalyti 100.0 4.3E-34 9.2E-39 283.6 20.2 265 227-506 1-279 (282)
361 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.9E-34 4E-39 295.3 17.8 272 225-506 5-300 (342)
362 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 7.4E-34 1.6E-38 289.1 20.7 268 221-506 6-288 (328)
363 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.1E-33 2.5E-38 289.8 22.0 274 217-506 9-300 (345)
364 PTZ00024 cyclin-dependent prot 100.0 9.8E-34 2.1E-38 289.0 21.1 273 225-508 8-315 (335)
365 cd07880 STKc_p38gamma_MAPK12 C 100.0 9.6E-34 2.1E-38 290.1 20.8 277 220-512 10-306 (343)
366 KOG4645 MAPKKK (MAP kinase kin 100.0 1.1E-35 2.3E-40 323.7 5.9 260 220-506 1230-1494(1509)
367 cd05123 STKc_AGC Catalytic dom 100.0 1.3E-33 2.9E-38 275.0 19.8 237 233-502 1-240 (250)
368 KOG0604 MAP kinase-activated p 100.0 1.8E-34 4E-39 270.6 10.9 258 223-508 59-324 (400)
369 cd07851 STKc_p38 Catalytic dom 100.0 7.3E-34 1.6E-38 291.0 15.9 268 223-506 13-298 (343)
370 KOG0666 Cyclin C-dependent kin 100.0 2.9E-34 6.3E-39 270.4 9.7 274 225-507 24-338 (438)
371 KOG0690 Serine/threonine prote 100.0 3.6E-34 7.8E-39 271.0 9.7 241 225-498 168-411 (516)
372 KOG0587 Traf2- and Nck-interac 100.0 4.9E-33 1.1E-37 293.2 18.9 265 216-506 10-282 (953)
373 cd05576 STKc_RPK118_like Catal 100.0 7.8E-33 1.7E-37 268.3 18.1 219 236-500 4-223 (237)
374 cd05610 STKc_MASTL Catalytic d 100.0 3.9E-32 8.5E-37 300.2 24.0 146 225-379 4-152 (669)
375 KOG0662 Cyclin-dependent kinas 100.0 5.7E-33 1.2E-37 242.7 13.5 267 226-506 3-283 (292)
376 KOG0696 Serine/threonine prote 100.0 9.9E-34 2.1E-38 275.3 9.7 264 225-532 349-616 (683)
377 KOG1006 Mitogen-activated prot 100.0 1.7E-34 3.7E-39 266.7 3.0 251 230-506 69-327 (361)
378 KOG0607 MAP kinase-interacting 100.0 1E-32 2.3E-37 260.7 14.4 269 216-505 74-360 (463)
379 KOG4236 Serine/threonine prote 100.0 2.5E-33 5.4E-38 279.6 10.7 244 230-506 569-819 (888)
380 KOG1151 Tousled-like protein k 100.0 2.1E-33 4.6E-38 275.1 9.3 262 225-505 463-740 (775)
381 smart00220 S_TKc Serine/Threon 100.0 1.5E-31 3.3E-36 257.9 20.2 238 237-505 1-240 (244)
382 KOG0669 Cyclin T-dependent kin 100.0 1.1E-33 2.4E-38 259.4 4.2 274 227-507 19-316 (376)
383 KOG0612 Rho-associated, coiled 100.0 4.5E-33 9.8E-38 299.7 8.9 258 217-505 67-337 (1317)
384 KOG0603 Ribosomal protein S6 k 100.0 5.1E-32 1.1E-36 278.5 14.5 244 223-509 320-566 (612)
385 PLN03224 probable serine/threo 100.0 2.8E-31 6E-36 280.2 20.5 270 223-506 143-500 (507)
386 PLN03225 Serine/threonine-prot 100.0 7.4E-32 1.6E-36 291.2 15.8 264 223-506 130-450 (566)
387 KOG0671 LAMMER dual specificit 100.0 3.3E-32 7.1E-37 263.7 9.3 274 215-506 79-406 (415)
388 KOG0614 cGMP-dependent protein 100.0 2.5E-32 5.5E-37 271.7 5.7 253 225-509 420-680 (732)
389 KOG1027 Serine/threonine prote 100.0 4.9E-31 1.1E-35 276.9 15.3 246 227-505 511-766 (903)
390 KOG0984 Mitogen-activated prot 100.0 1.8E-30 4E-35 231.9 9.1 209 220-441 41-257 (282)
391 KOG0695 Serine/threonine prote 100.0 3.8E-30 8.3E-35 244.5 10.4 250 224-499 249-503 (593)
392 cd00180 PKc Catalytic domain o 100.0 2.3E-28 5E-33 229.7 21.9 212 233-507 1-215 (215)
393 KOG1290 Serine/threonine prote 100.0 1.5E-28 3.3E-33 244.3 18.1 135 225-364 78-221 (590)
394 KOG0668 Casein kinase II, alph 100.0 1.5E-29 3.4E-34 229.2 9.2 259 224-506 37-322 (338)
395 KOG0608 Warts/lats-like serine 100.0 1.1E-28 2.3E-33 251.3 15.8 209 226-443 630-878 (1034)
396 KOG1152 Signal transduction se 100.0 3.1E-29 6.6E-34 253.3 10.2 197 225-437 561-770 (772)
397 KOG0664 Nemo-like MAPK-related 100.0 1.3E-30 2.8E-35 241.6 -0.8 272 227-508 55-345 (449)
398 smart00221 STYKc Protein kinas 100.0 4.9E-27 1.1E-31 224.3 19.9 200 227-438 1-202 (225)
399 KOG0195 Integrin-linked kinase 99.9 5.2E-28 1.1E-32 224.3 7.3 279 194-511 163-447 (448)
400 KOG0670 U4/U6-associated splic 99.9 7E-28 1.5E-32 240.7 7.3 210 214-440 421-639 (752)
401 KOG0665 Jun-N-terminal kinase 99.9 1.4E-27 3E-32 226.7 8.9 267 225-506 17-310 (369)
402 KOG1345 Serine/threonine kinas 99.9 1.9E-27 4.1E-32 220.7 9.3 259 222-510 21-288 (378)
403 KOG0576 Mitogen-activated prot 99.9 5.8E-28 1.3E-32 247.9 5.4 253 224-505 14-270 (829)
404 KOG1167 Serine/threonine prote 99.9 1.6E-26 3.4E-31 227.3 10.3 272 220-506 31-381 (418)
405 PLN00181 protein SPA1-RELATED; 99.9 2.1E-26 4.5E-31 260.5 8.4 204 278-506 28-265 (793)
406 smart00750 KIND kinase non-cat 99.9 4.3E-25 9.3E-30 203.7 15.1 168 311-511 1-170 (176)
407 KOG1164 Casein kinase (serine/ 99.9 2.3E-24 5E-29 218.5 21.7 281 226-534 19-315 (322)
408 KOG1165 Casein kinase (serine/ 99.9 1.4E-23 3.1E-28 200.2 17.2 265 226-513 29-302 (449)
409 PRK09188 serine/threonine prot 99.9 6.8E-24 1.5E-28 215.2 14.6 172 221-411 14-195 (365)
410 KOG1163 Casein kinase (serine/ 99.9 1.1E-22 2.5E-27 186.1 12.7 265 224-511 14-285 (341)
411 COG0515 SPS1 Serine/threonine 99.9 2E-21 4.4E-26 194.5 22.2 262 227-506 2-275 (384)
412 KOG1240 Protein kinase contain 99.9 1.8E-22 4E-27 217.7 5.6 252 226-506 24-291 (1431)
413 KOG0590 Checkpoint kinase and 99.9 4.6E-22 1E-26 214.7 7.3 257 229-506 322-585 (601)
414 cd05147 RIO1_euk RIO kinase fa 99.8 9.5E-21 2.1E-25 176.7 12.5 140 230-381 2-167 (190)
415 PRK10359 lipopolysaccharide co 99.8 7.5E-21 1.6E-25 179.9 10.6 178 222-431 28-217 (232)
416 cd05145 RIO1_like RIO kinase f 99.8 1E-19 2.2E-24 170.2 15.0 140 230-382 2-168 (190)
417 KOG4158 BRPK/PTEN-induced prot 99.8 9.4E-20 2E-24 177.8 12.7 202 280-505 274-509 (598)
418 KOG1023 Natriuretic peptide re 99.8 8.5E-20 1.8E-24 188.7 12.3 221 276-515 1-229 (484)
419 PRK12274 serine/threonine prot 99.8 1.8E-19 3.9E-24 167.0 12.9 190 229-439 6-210 (218)
420 PF14531 Kinase-like: Kinase-l 99.8 4.7E-19 1E-23 172.6 15.9 233 230-497 17-288 (288)
421 PRK10345 hypothetical protein; 99.8 9.1E-19 2E-23 165.1 15.0 140 228-378 5-156 (210)
422 KOG1166 Mitotic checkpoint ser 99.8 1.1E-18 2.5E-23 192.1 12.6 257 219-515 692-958 (974)
423 KOG0603 Ribosomal protein S6 k 99.8 6E-20 1.3E-24 189.8 2.0 226 232-500 1-232 (612)
424 cd05144 RIO2_C RIO kinase fami 99.7 1.7E-17 3.7E-22 156.2 13.5 143 221-382 11-176 (198)
425 PRK14879 serine/threonine prot 99.7 3.4E-17 7.4E-22 155.6 15.0 135 231-380 2-143 (211)
426 smart00090 RIO RIO-like kinase 99.7 2.2E-17 4.9E-22 159.3 13.0 143 226-381 29-198 (237)
427 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.8E-18 4E-23 175.6 3.8 177 300-503 330-509 (516)
428 TIGR03724 arch_bud32 Kae1-asso 99.7 6.5E-17 1.4E-21 152.3 13.9 131 232-380 1-138 (199)
429 PRK09605 bifunctional UGMP fam 99.7 5.9E-17 1.3E-21 175.4 14.0 143 219-380 327-476 (535)
430 KOG0606 Microtubule-associated 99.7 1.1E-16 2.4E-21 173.4 7.2 211 225-498 83-304 (1205)
431 cd05119 RIO RIO kinase family, 99.6 1.3E-15 2.7E-20 141.9 12.5 137 230-382 2-165 (187)
432 PRK01723 3-deoxy-D-manno-octul 99.6 4.9E-15 1.1E-19 143.2 15.0 140 230-380 36-191 (239)
433 cd05120 APH_ChoK_like Aminogly 99.6 4.8E-15 1E-19 132.0 13.0 134 230-380 3-138 (155)
434 KOG0590 Checkpoint kinase and 99.6 7.9E-16 1.7E-20 166.5 1.6 260 226-509 21-289 (601)
435 TIGR01982 UbiB 2-polyprenylphe 99.5 1.7E-13 3.7E-18 143.9 13.0 149 223-382 116-308 (437)
436 KOG1266 Protein kinase [Signal 99.4 5.3E-13 1.2E-17 128.2 8.4 211 274-507 119-332 (458)
437 PRK04750 ubiB putative ubiquin 99.3 5.8E-12 1.3E-16 134.0 11.4 149 220-383 115-316 (537)
438 cd05151 ChoK Choline Kinase (C 99.3 9.4E-12 2E-16 113.7 10.8 130 231-380 4-136 (170)
439 KOG0601 Cyclin-dependent kinas 99.3 2.9E-12 6.3E-17 133.1 8.0 253 225-505 114-378 (524)
440 KOG1243 Protein kinase [Genera 99.3 8.2E-11 1.8E-15 123.6 17.4 232 246-515 34-268 (690)
441 cd05146 RIO3_euk RIO kinase fa 99.2 1.4E-10 3E-15 107.6 14.3 136 231-381 3-174 (197)
442 cd05154 ACAD10_11_like Acyl-Co 99.2 2.3E-10 5E-15 109.1 13.4 146 231-380 4-206 (223)
443 KOG3087 Serine/threonine prote 99.1 6.5E-10 1.4E-14 99.4 12.9 145 229-381 11-166 (229)
444 COG3642 Mn2+-dependent serine/ 99.1 9.6E-10 2.1E-14 98.8 13.4 132 231-380 2-140 (204)
445 PRK15123 lipopolysaccharide co 99.1 2.8E-09 6.1E-14 104.4 16.0 145 232-380 29-194 (268)
446 KOG0601 Cyclin-dependent kinas 99.0 2E-10 4.3E-15 119.6 6.1 250 221-509 261-517 (524)
447 KOG0606 Microtubule-associated 99.0 1.2E-10 2.5E-15 127.4 4.0 269 225-531 804-1101(1205)
448 KOG3741 Poly(A) ribonuclease s 99.0 1.1E-08 2.3E-13 104.7 16.4 172 237-434 288-474 (655)
449 COG4248 Uncharacterized protei 99.0 4.7E-08 1E-12 97.7 18.6 270 230-516 16-306 (637)
450 PF01163 RIO1: RIO1 family; I 99.0 6.5E-09 1.4E-13 96.2 11.8 126 240-381 1-156 (188)
451 PRK09902 hypothetical protein; 98.9 8.4E-08 1.8E-12 89.4 15.4 145 233-381 26-180 (216)
452 PF06293 Kdo: Lipopolysacchari 98.8 4.6E-08 9.9E-13 92.6 13.3 128 249-381 32-171 (206)
453 COG0478 RIO-like serine/threon 98.8 3.6E-08 7.9E-13 93.9 11.2 134 228-379 94-250 (304)
454 COG0661 AarF Predicted unusual 98.7 1.2E-07 2.7E-12 100.5 11.4 154 220-383 121-317 (517)
455 KOG2137 Protein kinase [Signal 98.7 9.3E-09 2E-13 108.8 2.4 153 336-505 107-264 (700)
456 KOG1235 Predicted unusual prot 98.5 8.2E-07 1.8E-11 94.0 11.1 153 220-382 157-356 (538)
457 COG1718 RIO1 Serine/threonine 98.4 4.9E-06 1.1E-10 78.8 13.4 154 214-382 34-217 (268)
458 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 1.3E-05 2.7E-10 77.0 13.3 138 231-379 7-181 (226)
459 PF01636 APH: Phosphotransfera 98.3 4.8E-06 1E-10 79.7 10.5 145 231-380 3-197 (239)
460 COG2112 Predicted Ser/Thr prot 98.3 8.1E-06 1.8E-10 73.2 10.4 129 229-381 26-156 (201)
461 PF06176 WaaY: Lipopolysacchar 98.2 2.9E-05 6.2E-10 72.9 13.2 144 222-380 28-183 (229)
462 PF12260 PIP49_C: Protein-kina 98.2 8.2E-06 1.8E-10 75.8 9.1 103 270-382 7-113 (188)
463 PLN02876 acyl-CoA dehydrogenas 98.1 4.1E-05 8.9E-10 87.4 15.0 83 230-313 43-131 (822)
464 cd05150 APH Aminoglycoside 3'- 98.1 4.3E-05 9.2E-10 74.2 12.9 138 233-379 6-192 (244)
465 PRK10593 hypothetical protein; 98.0 0.00016 3.5E-09 72.4 15.3 82 227-313 16-100 (297)
466 KOG0576 Mitogen-activated prot 97.9 1.4E-06 3.1E-11 91.5 -1.6 182 230-436 247-430 (829)
467 cd05157 ETNK_euk Ethanolamine 97.9 0.0002 4.2E-09 69.1 13.1 73 231-313 4-79 (235)
468 PF13095 FTA2: Kinetochore Sim 97.9 0.0002 4.2E-09 66.5 12.1 130 225-378 37-206 (207)
469 KOG1035 eIF-2alpha kinase GCN2 97.9 4.2E-05 9.2E-10 85.9 8.7 203 269-510 229-438 (1351)
470 PF10707 YrbL-PhoP_reg: PhoP r 97.8 0.00045 9.7E-09 64.6 14.1 130 229-374 5-165 (199)
471 PRK09550 mtnK methylthioribose 97.8 0.001 2.3E-08 68.8 17.4 76 231-312 32-117 (401)
472 cd05155 APH_ChoK_like_1 Unchar 97.8 0.00022 4.7E-09 68.9 11.3 76 231-314 3-82 (235)
473 TIGR02721 ycfN_thiK thiamine k 97.8 0.0002 4.2E-09 70.2 10.7 137 233-380 4-175 (256)
474 cd05156 ChoK_euk Choline Kinas 97.5 0.00083 1.8E-08 67.4 11.0 138 232-379 5-212 (302)
475 cd05153 HomoserineK_II Homoser 97.4 0.00089 1.9E-08 66.9 10.5 145 230-379 19-204 (296)
476 PRK05231 homoserine kinase; Pr 97.3 0.0052 1.1E-07 62.1 14.0 144 231-379 28-216 (319)
477 KOG2268 Serine/threonine prote 97.3 0.00055 1.2E-08 67.3 6.3 144 215-377 79-248 (465)
478 TIGR00938 thrB_alt homoserine 97.1 0.009 2E-07 60.1 14.0 146 230-379 27-216 (307)
479 PF03881 Fructosamin_kin: Fruc 97.1 0.0024 5.1E-08 63.4 9.5 73 230-311 22-97 (288)
480 cd05152 MPH2' Macrolide 2'-Pho 97.1 0.0051 1.1E-07 60.9 11.8 31 350-380 185-216 (276)
481 TIGR01767 MTRK 5-methylthiorib 97.0 0.018 3.8E-07 58.6 14.5 80 232-317 2-92 (370)
482 PLN02236 choline kinase 96.9 0.013 2.7E-07 60.0 12.5 138 232-379 43-230 (344)
483 COG3173 Predicted aminoglycosi 96.7 0.024 5.1E-07 56.8 12.3 146 232-381 32-229 (321)
484 PLN02756 S-methyl-5-thioribose 96.6 0.046 9.9E-07 56.7 14.0 74 230-310 37-119 (418)
485 KOG1219 Uncharacterized conser 96.6 0.0045 9.8E-08 73.1 7.0 47 30-77 3881-3928(4289)
486 KOG1826 Ras GTPase activating 96.3 0.00068 1.5E-08 78.3 -1.5 161 269-436 1276-1440(2724)
487 PLN02421 phosphotransferase, a 96.3 0.043 9.2E-07 55.9 11.6 138 232-379 21-212 (330)
488 KOG2270 Serine/threonine prote 96.2 0.059 1.3E-06 54.4 11.6 138 231-380 150-313 (520)
489 PF01633 Choline_kinase: Choli 96.1 0.011 2.4E-07 55.9 5.9 30 351-380 144-174 (211)
490 PTZ00384 choline kinase; Provi 95.9 0.099 2.1E-06 54.2 12.3 74 231-314 56-137 (383)
491 TIGR02906 spore_CotS spore coa 95.8 0.11 2.5E-06 52.0 12.5 29 350-379 187-215 (313)
492 COG2334 Putative homoserine ki 95.8 0.15 3.2E-06 51.7 12.8 142 233-379 34-227 (331)
493 PRK12396 5-methylribose kinase 95.8 0.063 1.4E-06 55.4 10.1 75 231-311 35-118 (409)
494 KOG1093 Predicted protein kina 95.8 0.016 3.5E-07 60.6 5.8 72 241-320 5-76 (725)
495 PF08693 SKG6: Transmembrane a 95.7 0.0077 1.7E-07 39.8 2.1 30 119-148 11-40 (40)
496 COG5072 ALK1 Serine/threonine 95.6 0.043 9.4E-07 55.2 7.7 75 298-382 298-372 (488)
497 PRK06148 hypothetical protein; 95.4 0.17 3.8E-06 59.2 13.5 145 231-380 31-236 (1013)
498 KOG1236 Predicted unusual prot 95.3 0.076 1.7E-06 54.3 8.4 60 302-366 321-380 (565)
499 COG3001 Uncharacterized protei 95.2 0.21 4.5E-06 47.4 10.4 75 231-314 22-99 (286)
500 TIGR02904 spore_ysxE spore coa 94.9 0.2 4.3E-06 50.4 10.6 30 351-380 197-226 (309)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-55 Score=449.59 Aligned_cols=291 Identities=53% Similarity=0.882 Sum_probs=253.4
Q ss_pred ceeeeCHHHHHHHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeee
Q 009404 211 TIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGY 290 (535)
Q Consensus 211 ~~~~~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~ 290 (535)
....|+|.+++.||++|+..+.||+|+||.||+|.+.+++.||||++....... ..+|.+|++++.+++|||+|+|+||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEE
Confidence 356799999999999999999999999999999999999999999998765543 4559999999999999999999999
Q ss_pred eeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcE
Q 009404 291 CSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNA 370 (535)
Q Consensus 291 ~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~v 370 (535)
|.+... .++||||||++|+|.++|+......++|..|++||.++|+||+|||+...|+|+||||||+|||||+++++
T Consensus 140 C~e~~~---~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 140 CLEGGE---HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred EecCCc---eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 998432 57999999999999999987543379999999999999999999999988899999999999999999999
Q ss_pred EEEecCCcccccc-CCCCCCCCCCCcc-ccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh
Q 009404 371 KITDLGMAKRLKA-DGLPSCSSSPARM-QGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV 448 (535)
Q Consensus 371 kL~DFGla~~~~~-~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~ 448 (535)
||+|||+|+..+. ... .... .||.+|+|||++..+..+.|+|||||||+|+||+||+.+.+......+..+.
T Consensus 217 KlsDFGLa~~~~~~~~~------~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~ 290 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTS------VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLV 290 (361)
T ss_pred EccCccCcccCCccccc------eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHH
Confidence 9999999966553 211 1111 7999999999999999999999999999999999999998876655566678
Q ss_pred hhccccccCcccccccCCCCCCC-CCCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCC
Q 009404 449 LWATPRLQDSGTVISELPDPRLK-GDFPK-EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513 (535)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~l~-~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~ 513 (535)
.|..+.+.+. .+.++.|+.+. ..++. +....+..++.+|++.+|.+||+|.||++.|..+...
T Consensus 291 ~w~~~~~~~~--~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 291 EWAKPLLEEG--KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHHHHHCc--chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 8886666554 57899999987 66664 5777899999999999999999999999999766543
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-49 Score=396.27 Aligned_cols=261 Identities=33% Similarity=0.509 Sum_probs=212.6
Q ss_pred CCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 228 SGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 228 ~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
...+.||+|+||+||+|.+.....||||++...... .....|.+|+.+|++++|||||+++|+|.+... ...+|||
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~---~~~iVtE 120 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG---SLCIVTE 120 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC---ceEEEEE
Confidence 334669999999999999975445999999865422 224579999999999999999999999987432 4689999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-cEEEEecCCccccccCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL-NAKITDLGMAKRLKADG 385 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~-~vkL~DFGla~~~~~~~ 385 (535)
||++|+|.++|+......+++..++.++.|||+||+|||+++. ||||||||+||||+.++ ++||+|||+++......
T Consensus 121 y~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 121 YMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred eCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 9999999999987545679999999999999999999999873 99999999999999997 99999999998765432
Q ss_pred CCCCCCCCCccccCccccCccccc--cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAM--VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~--~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||......... .
T Consensus 199 -----~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~-----------------~ 256 (362)
T KOG0192|consen 199 -----TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVA-----------------S 256 (362)
T ss_pred -----ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHH-----------------H
Confidence 1223367999999999999 569999999999999999999999999765441111 1
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcc
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~ 515 (535)
.+.....+...|..++..+..++.+||+.||+.||++.|++..|+.+.....
T Consensus 257 ~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 257 AVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred HHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 1111122223344466669999999999999999999999999998866444
No 3
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.1e-49 Score=418.41 Aligned_cols=263 Identities=29% Similarity=0.451 Sum_probs=224.2
Q ss_pred cCCCCCcccceeCceEEEEEEEc------CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKR 298 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 298 (535)
.+....+.||+|+||+||+|+.. +.+.||||.+++....+...+|.+|+++|..++|||||+|+|+|.+ +
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~----~ 561 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE----G 561 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc----C
Confidence 44455678999999999999854 3568999999998887788899999999999999999999999998 5
Q ss_pred ceEEEEEecCCCCCHHHhhhhcc--------cCC----CCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVL--------VEG----MNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE 366 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~--------~~~----l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~ 366 (535)
...++|+|||..|||.+||+... ... ++..+.+.||.|||.||+||-++. ++||||..+|+||.+
T Consensus 562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGE 638 (774)
T ss_pred CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceecc
Confidence 57799999999999999996532 122 888999999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccc
Q 009404 367 NLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEE 445 (535)
Q Consensus 367 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~ 445 (535)
+..|||+||||++.....++.... ....-+.+|||||.+..++||.+||||||||+|||+++ |++||......+
T Consensus 639 ~l~VKIsDfGLsRdiYssDYYk~~---~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E-- 713 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDYYKVR---GNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE-- 713 (774)
T ss_pred ceEEEecccccchhhhhhhhhccc---CCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH--
Confidence 999999999999988776654322 12234679999999999999999999999999999999 899997665432
Q ss_pred hhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcc
Q 009404 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515 (535)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~ 515 (535)
++..+....+ ...|+.++..+++||..||+.+|.+||++.||-..|+...+..+
T Consensus 714 ---------------VIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 714 ---------------VIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred ---------------HHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 2222333333 46788888899999999999999999999999999999877655
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-49 Score=402.04 Aligned_cols=256 Identities=30% Similarity=0.450 Sum_probs=216.2
Q ss_pred CCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+...+.||+|.||+||.|.++....||+|.++... ...+.|.+|+++|++|+|+|||+++|+|.. ...++||||
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~--m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~----~~piyIVtE 281 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS--MSPEAFLREAQIMKKLRHEKLVKLYGVCTK----QEPIYIVTE 281 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccc--cChhHHHHHHHHHHhCcccCeEEEEEEEec----CCceEEEEE
Confidence 33467899999999999999888899999998763 334569999999999999999999999987 336799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
||+.|+|.+||+......+...+.+.++.|||+||+||++++ +|||||.++||||+++..+||+|||||+...++.+
T Consensus 282 ~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y 358 (468)
T KOG0197|consen 282 YMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY 358 (468)
T ss_pred ecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence 999999999999866677999999999999999999999998 99999999999999999999999999996555543
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccccC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISEL 465 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
.. .....-+..|+|||.+..+.++.|||||||||+||||+| |+.|+......+ +-+.
T Consensus 359 ~~----~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e------------------v~~~ 416 (468)
T KOG0197|consen 359 TA----SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE------------------VLEL 416 (468)
T ss_pred ee----cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH------------------HHHH
Confidence 22 122234578999999999999999999999999999999 888876543321 1222
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCC
Q 009404 466 PDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513 (535)
Q Consensus 466 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~ 513 (535)
++...+...|..++..+.++|..||+.+|++|||++.+...|+++...
T Consensus 417 le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 417 LERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred HhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 333444566777888899999999999999999999999999988653
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-47 Score=371.43 Aligned_cols=262 Identities=29% Similarity=0.394 Sum_probs=214.7
Q ss_pred eCHHHHHHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeee
Q 009404 215 FSYSALEHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSE 293 (535)
Q Consensus 215 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~ 293 (535)
+++.+++. .+.||+|..|+|||++++ +++.+|+|++.....+...+++.+|+++++..+||+||.++|.|..
T Consensus 76 i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 44555554 688999999999999986 4899999999776666777789999999999999999999999987
Q ss_pred cccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEeCCCCcEEE
Q 009404 294 FRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHE-AAAPRILHRDIKSSNILLDENLNAKI 372 (535)
Q Consensus 294 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~i~H~DLk~~NILl~~~~~vkL 372 (535)
... ...|+||||++|||++++... +.+++...-+|+.+|++||.|||+ ++ |+||||||+||||+..|+|||
T Consensus 149 ~~~---~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKi 220 (364)
T KOG0581|consen 149 NGE---EISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKI 220 (364)
T ss_pred CCc---eEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEe
Confidence 331 579999999999999999865 669999999999999999999996 55 999999999999999999999
Q ss_pred EecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcc
Q 009404 373 TDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWAT 452 (535)
Q Consensus 373 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~ 452 (535)
+|||.+..+... .-..++||..|||||.+.+..|+.++||||||++++|+.+|+.||......... |.
T Consensus 221 cDFGVS~~lvnS-------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~----~~- 288 (364)
T KOG0581|consen 221 CDFGVSGILVNS-------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLD----IF- 288 (364)
T ss_pred ccccccHHhhhh-------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCC----HH-
Confidence 999999987643 345689999999999999999999999999999999999999999654111000 00
Q ss_pred ccccCcccccccCCCCCCCCCCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 453 PRLQDSGTVISELPDPRLKGDFPK-EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 453 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
..+..+.+.. ....|. .++.++.+++..||++||.+|||+.|++++=.-..
T Consensus 289 -------~Ll~~Iv~~p-pP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~ 340 (364)
T KOG0581|consen 289 -------ELLCAIVDEP-PPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKK 340 (364)
T ss_pred -------HHHHHHhcCC-CCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhh
Confidence 1122222211 112233 35666999999999999999999999998654443
No 6
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-45 Score=360.90 Aligned_cols=284 Identities=26% Similarity=0.425 Sum_probs=221.9
Q ss_pred eCHHHHHHHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhcc--CCCCccceeeeee
Q 009404 215 FSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL--HHCHVVPLVGYCS 292 (535)
Q Consensus 215 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l--~H~niv~l~g~~~ 292 (535)
.++........+....+.||+|.||+||+|.|+ |+.||||++.... +..+.+|.++.+.+ +|+||+.+++.-.
T Consensus 201 lplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd----E~SWfrEtEIYqTvmLRHENILgFIaaD~ 275 (513)
T KOG2052|consen 201 LPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD----ERSWFRETEIYQTVMLRHENILGFIAADN 275 (513)
T ss_pred chhHhHHhhhheeEEEEEecCccccceeecccc-CCceEEEEecccc----hhhhhhHHHHHHHHHhccchhhhhhhccc
Confidence 444555666677888899999999999999997 8899999998643 23477888887764 9999999999887
Q ss_pred ecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCeeecCCCCCCEEeCCC
Q 009404 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHE-----AAAPRILHRDIKSSNILLDEN 367 (535)
Q Consensus 293 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-----~~~~~i~H~DLk~~NILl~~~ 367 (535)
...+...+++||.+|.+.|||+|||.+ ..++....++++..+|.||+|||- +|+|.|.|||||++||||..+
T Consensus 276 ~~~gs~TQLwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn 352 (513)
T KOG2052|consen 276 KDNGSWTQLWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 352 (513)
T ss_pred cCCCceEEEEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccC
Confidence 777778899999999999999999986 568999999999999999999995 678999999999999999999
Q ss_pred CcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCC------CCccchHHHHHHHHHHHHhC---------
Q 009404 368 LNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR------ASLMSDVFSFGVVLLELITG--------- 432 (535)
Q Consensus 368 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~s~ksDVwSlGvil~eLltG--------- 432 (535)
+...|+|+|+|.....+.... ....+..+||.+|||||++...- .-..+||||||.++||+...
T Consensus 353 ~~C~IADLGLAv~h~~~t~~i-di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~ee 431 (513)
T KOG2052|consen 353 GTCCIADLGLAVRHDSDTDTI-DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEE 431 (513)
T ss_pred CcEEEeeceeeEEecccCCcc-cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehh
Confidence 999999999998776553211 23345578999999999986432 23468999999999999862
Q ss_pred -CCCCCCccccccchhhhhccccccCcccccc-cCCCCCCCCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 433 -RQPIHRSITKGEESLVLWATPRLQDSGTVIS-ELPDPRLKGDF-PKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 433 -~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
+.||....+.+ +.+++..+++- +-..|.+.... ..++...|.++|+.||..||..|.|+-.+-+.|.+
T Consensus 432 y~~Pyyd~Vp~D---------Ps~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~ 502 (513)
T KOG2052|consen 432 YQLPYYDVVPSD---------PSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAK 502 (513)
T ss_pred hcCCcccCCCCC---------CCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHH
Confidence 46775543332 12222222211 11223332222 24567789999999999999999999999999999
Q ss_pred hCCCccc
Q 009404 510 IAPDKSR 516 (535)
Q Consensus 510 l~~~~~~ 516 (535)
+....++
T Consensus 503 l~~~~ek 509 (513)
T KOG2052|consen 503 LSNSDEK 509 (513)
T ss_pred HhcChhh
Confidence 9865443
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.2e-46 Score=377.71 Aligned_cols=249 Identities=27% Similarity=0.455 Sum_probs=213.1
Q ss_pred cCCCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
..|...++||+|||+.+|.++. ..|+.||+|++.... ....++...+|+++-++|+|||||+++++|.+ ....
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED----s~nV 93 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED----SNNV 93 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec----CCce
Confidence 4578889999999999999998 779999999998642 33455668999999999999999999999988 5578
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
|||.|+|++++|.+++++. +.+++.++..+..||+.||.|||+.+ |+|||||..|+||+++.+|||+|||||..+
T Consensus 94 YivLELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~l 168 (592)
T KOG0575|consen 94 YIVLELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQL 168 (592)
T ss_pred EEEEEecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeee
Confidence 9999999999999999843 77999999999999999999999998 999999999999999999999999999988
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
..+ .....+..||+.|.|||++.....+..+||||+|||+|.||.|++||+.....+...
T Consensus 169 e~~-----~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~--------------- 228 (592)
T KOG0575|consen 169 EYD-----GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYN--------------- 228 (592)
T ss_pred cCc-----ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHH---------------
Confidence 755 245667899999999999999999999999999999999999999997543322111
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.+.-..+ .+|...+....+||.++|+.||.+|||+++|+..
T Consensus 229 --~Ik~~~Y--~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 229 --KIKLNEY--SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred --HHHhcCc--ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1111111 2344556668899999999999999999999974
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-45 Score=356.68 Aligned_cols=203 Identities=29% Similarity=0.467 Sum_probs=180.3
Q ss_pred hcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
..+|...+.||+|+||+||+|+++. +..||||.+.... ..+..+.+..|+.+|+.++|||||++++++.. +..+
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~----~~~i 84 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIED----DDFI 84 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEec----CCeE
Confidence 3567778889999999999999864 8999999998764 34455568899999999999999999999887 5588
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC------CcEEEEec
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN------LNAKITDL 375 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~------~~vkL~DF 375 (535)
+||||||.+|+|.+||+.. ..+++.+...++.|+|.||++||+++ |+||||||+||||+.+ -.+||+||
T Consensus 85 ~lVMEyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADF 159 (429)
T KOG0595|consen 85 YLVMEYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADF 159 (429)
T ss_pred EEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEeccc
Confidence 9999999999999999875 46999999999999999999999998 9999999999999764 56899999
Q ss_pred CCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccc
Q 009404 376 GMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSIT 441 (535)
Q Consensus 376 Gla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~ 441 (535)
|+|+.+... .......|++-|||||++....|+-|+|+||+|+|||++++|+.||+....
T Consensus 160 GfAR~L~~~------~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 160 GFARFLQPG------SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred chhhhCCch------hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 999998754 334567899999999999999999999999999999999999999975443
No 9
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-46 Score=387.28 Aligned_cols=264 Identities=24% Similarity=0.389 Sum_probs=224.1
Q ss_pred cCCCCCcccceeCceEEEEEEEcC----CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD----GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~----g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
+...+.++||.|.||+|++|+++- ...||||.|+.....+.+.+|+.|+.+|.+++||||++|.|+... ...
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk----s~P 704 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK----SKP 704 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEec----Cce
Confidence 345567899999999999999863 467999999999888888899999999999999999999999987 556
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.+||.|||+||+|+.||+.+.++ +.+.+++.++++||.||+||-+++ ++||||.++||||+.+...|++|||+++.
T Consensus 705 vMIiTEyMENGsLDsFLR~~DGq-ftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRv 780 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRV 780 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcCCc-eEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceee
Confidence 79999999999999999987644 999999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
+.++... ......-.-+.+|+|||.+..++++.+|||||||+++||.++ |..||.....++
T Consensus 781 ledd~~~--~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd---------------- 842 (996)
T KOG0196|consen 781 LEDDPEA--AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD---------------- 842 (996)
T ss_pred cccCCCc--cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH----------------
Confidence 7665311 111122223578999999999999999999999999999988 899986554431
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCccc
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSR 516 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~~ 516 (535)
++ +.+...++.+.|.+++..|.+||..||++|-.+||.+.||+.+|+++..+...
T Consensus 843 -VI-kaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~S 897 (996)
T KOG0196|consen 843 -VI-KAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNS 897 (996)
T ss_pred -HH-HHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchh
Confidence 11 12233344566788888999999999999999999999999999999876543
No 10
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-44 Score=365.07 Aligned_cols=271 Identities=26% Similarity=0.379 Sum_probs=222.5
Q ss_pred HHHHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 220 LEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 220 l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
.+.+.+.....++||+|.||+|.+.....+..||||+++.......+.+|.+|+++|.+++||||++++|+|.. +.
T Consensus 533 ~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~----De 608 (807)
T KOG1094|consen 533 VEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ----DD 608 (807)
T ss_pred hhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec----CC
Confidence 45556777788999999999999999988899999999998888888899999999999999999999999997 55
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
.+++|+|||++|+|.+||.++......-...++|+.|||.||+||.+.+ ++||||.++|+|+|.++++||+|||+++
T Consensus 609 PicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR 685 (807)
T KOG1094|consen 609 PLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSR 685 (807)
T ss_pred chHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCccccc
Confidence 6799999999999999998765454566777889999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh--CCCCCCCccccccchhhhhccccccC
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT--GRQPIHRSITKGEESLVLWATPRLQD 457 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt--G~~P~~~~~~~~~~~~~~~~~~~~~~ 457 (535)
.+...++.. ...+.+-+.+|||||.+..++++.+||||+||+++||+++ ...||....+... +......+..
T Consensus 686 ~lysg~yy~---vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v---ven~~~~~~~ 759 (807)
T KOG1094|consen 686 NLYSGDYYR---VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV---VENAGEFFRD 759 (807)
T ss_pred ccccCCcee---eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH---HHhhhhhcCC
Confidence 877665432 2233455789999999999999999999999999999988 6789865543311 1111111111
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 458 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
. ........|.-++..+.++|.+||+.+..+||+++++...|++.+
T Consensus 760 ~--------~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 760 Q--------GRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred C--------CcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 1 111112345556677899999999999999999999999998764
No 11
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-45 Score=357.35 Aligned_cols=256 Identities=25% Similarity=0.316 Sum_probs=205.9
Q ss_pred HhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCCh------hHHHHHHHHHHhccCCCCccceeeeeeecc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNA------DSVFLTEVDMLSRLHHCHVVPLVGYCSEFR 295 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~------~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~ 295 (535)
..+.|...+.||+|+||.|-+|..+ +|+.||||+++.+..... .....+|+++|++|+|||||++.+++..
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~-- 247 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV-- 247 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec--
Confidence 4566778899999999999999865 599999999986532221 1224699999999999999999999987
Q ss_pred cCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC---CcEEE
Q 009404 296 GKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN---LNAKI 372 (535)
Q Consensus 296 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~---~~vkL 372 (535)
....|+||||++||+|.+++-.+ +.+.+..-..+++|++.|+.|||++| |+||||||+|||+..+ ..+||
T Consensus 248 --~ds~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKI 320 (475)
T KOG0615|consen 248 --PDSSYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKI 320 (475)
T ss_pred --CCceEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEe
Confidence 34559999999999999999664 45777888999999999999999999 9999999999999765 77999
Q ss_pred EecCCccccccCCCCCCCCCCCccccCccccCccccccCC---CCccchHHHHHHHHHHHHhCCCCCCCccccccchhhh
Q 009404 373 TDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR---ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL 449 (535)
Q Consensus 373 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~ 449 (535)
+|||+|+..... ....+++||+.|.|||++.+.. +..++|+||+||+||-+|+|.+||....... +.
T Consensus 321 tDFGlAK~~g~~------sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl-- 390 (475)
T KOG0615|consen 321 TDFGLAKVSGEG------SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SL-- 390 (475)
T ss_pred cccchhhccccc------eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cH--
Confidence 999999988753 3456789999999999997654 3458899999999999999999996543321 00
Q ss_pred hccccccCcccccccCCCCCC--CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 450 WATPRLQDSGTVISELPDPRL--KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
.+++...++ ......+.++...+|+.+||..||++|||+.|++++-|-
T Consensus 391 ------------~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~ 440 (475)
T KOG0615|consen 391 ------------KEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWF 440 (475)
T ss_pred ------------HHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhh
Confidence 111111111 123345677889999999999999999999999986543
No 12
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-45 Score=369.63 Aligned_cols=255 Identities=29% Similarity=0.486 Sum_probs=217.7
Q ss_pred HHHHHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCc
Q 009404 219 ALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKR 298 (535)
Q Consensus 219 ~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 298 (535)
.|+...+..+.++.||.|+.|.||+|+++ ++.||||+++.. -.++|+.|++|+||||+.+.|+|.. .
T Consensus 118 ~WeiPFe~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~el--------kETdIKHLRkLkH~NII~FkGVCtq----s 184 (904)
T KOG4721|consen 118 LWEIPFEEISELEWLGSGAQGAVFLGRLH-NETVAVKKVREL--------KETDIKHLRKLKHPNIITFKGVCTQ----S 184 (904)
T ss_pred hccCCHHHhhhhhhhccCcccceeeeecc-CceehhHHHhhh--------hhhhHHHHHhccCcceeeEeeeecC----C
Confidence 35555566667889999999999999997 688999998643 2578999999999999999999997 4
Q ss_pred ceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCc
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMA 378 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla 378 (535)
..++||||||+.|.|.++|+.. ..+.....+.+..+||.||.|||.+. |||||||+-||||+.+..|||+|||-+
T Consensus 185 PcyCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS 259 (904)
T KOG4721|consen 185 PCYCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTS 259 (904)
T ss_pred ceeEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccch
Confidence 5779999999999999999864 66889999999999999999999987 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCc
Q 009404 379 KRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS 458 (535)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
+..... .....+.||..|||||++.+.+.++|+|||||||+|||||||..||.... ...++|.
T Consensus 260 ~e~~~~------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd----ssAIIwG------- 322 (904)
T KOG4721|consen 260 KELSDK------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD----SSAIIWG------- 322 (904)
T ss_pred Hhhhhh------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc----hheeEEe-------
Confidence 877543 33456899999999999999999999999999999999999999995322 2222332
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCc
Q 009404 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514 (535)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~ 514 (535)
+-...+....|..+++.+.-|++.||+..|.+||++.+++.+|+...++.
T Consensus 323 ------VGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pel 372 (904)
T KOG4721|consen 323 ------VGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPEL 372 (904)
T ss_pred ------ccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHH
Confidence 23344455667777788999999999999999999999999999877653
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-44 Score=349.46 Aligned_cols=244 Identities=27% Similarity=0.356 Sum_probs=202.1
Q ss_pred hcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
.++|+..++||+|+||+||.++.++ ++.+|+|+++...- .........|..+|..++||.||++.-.+.+ ...
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt----~~k 99 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQT----EEK 99 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEeccc----CCe
Confidence 3578889999999999999998765 99999999986532 2234457899999999999999999977766 567
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
+|||+||+.||.|+.+|++. ..+++..+..++..|+.||.|||+++ |+||||||+|||||++|+++|+|||+++.
T Consensus 100 LylVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~ 174 (357)
T KOG0598|consen 100 LYLVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKE 174 (357)
T ss_pred EEEEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchh
Confidence 89999999999999999864 55899999999999999999999999 99999999999999999999999999986
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
...++ .....+.||+.|||||++....++..+|.||||+++|||++|.+||.........
T Consensus 175 ~~~~~-----~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~--------------- 234 (357)
T KOG0598|consen 175 DLKDG-----DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMY--------------- 234 (357)
T ss_pred cccCC-----CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHH---------------
Confidence 65442 3455689999999999999999999999999999999999999999754432111
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT 499 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt 499 (535)
..+....+ ...|...+....+++.++|..||++|..
T Consensus 235 --~~I~~~k~-~~~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 235 --DKILKGKL-PLPPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred --HHHhcCcC-CCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence 11111111 1223334556889999999999999975
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-45 Score=340.75 Aligned_cols=258 Identities=23% Similarity=0.336 Sum_probs=204.5
Q ss_pred CCCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|.++++||+|.||+||+++. .+|..||.|.++-.. ....+.....|+.+|++|+|||||++++.-. ......++|
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f--~~~~evlni 97 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF--IEDNEVLNI 97 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh--hccchhhHH
Confidence 456678899999999999974 579999999998443 3344566899999999999999999997322 222345799
Q ss_pred EEecCCCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 304 VFEFMPNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLHEAAA-PRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~-~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
||||+..|+|...++... .+.+++..+++++.|++.||.++|+.-. ..|+||||||.||+|+.+|.|||+|||+++.
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 999999999999996543 3459999999999999999999998321 1399999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
+.... ......+|||.||+||.+....|+.||||||+||++|||..-++||....-. ++.
T Consensus 178 l~s~~-----tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~---~L~------------ 237 (375)
T KOG0591|consen 178 LSSKT-----TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLL---SLC------------ 237 (375)
T ss_pred hcchh-----HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHH---HHH------------
Confidence 87653 2345678999999999999999999999999999999999999999754211 100
Q ss_pred ccccCCCCCCCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 461 VISELPDPRLKGDFP-KEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.++..-.+ ...| ...+..+..|+..|+..||+.||+.-.+++.+.
T Consensus 238 --~KI~qgd~-~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 238 --KKIEQGDY-PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred --HHHHcCCC-CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 01111111 1234 455778999999999999999999655555444
No 15
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-44 Score=391.12 Aligned_cols=265 Identities=27% Similarity=0.415 Sum_probs=216.8
Q ss_pred hcCCCCCcccceeCceEEEEEEEcC--Cc----EEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccC
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTD--GR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGK 297 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~--g~----~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 297 (535)
..+.+..+.||+|+||.||.|...+ |. .||||.++...+.+...+|++|..+|+.++|||||+++|+|.+
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~---- 766 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD---- 766 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC----
Confidence 3445557889999999999998754 43 4999999988777778889999999999999999999999987
Q ss_pred cceEEEEEecCCCCCHHHhhhhcc-----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEE
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVL-----VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKI 372 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL 372 (535)
....+|++|||++|+|..||++.. ...+...+.+.++.|||+|++||++++ +|||||.++|+||++...|||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKI 843 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKI 843 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEE
Confidence 345699999999999999998752 244889999999999999999999998 999999999999999999999
Q ss_pred EecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhc
Q 009404 373 TDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWA 451 (535)
Q Consensus 373 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~ 451 (535)
+|||||+.+...++...... ..-+..|||||.+..+.++.|+|||||||+||||+| |..||......+- . ..+
T Consensus 844 aDFGlArDiy~~~yyr~~~~---a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v-~-~~~- 917 (1025)
T KOG1095|consen 844 ADFGLARDIYDKDYYRKHGE---AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV-L-LDV- 917 (1025)
T ss_pred cccchhHhhhhchheeccCc---cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH-H-HHH-
Confidence 99999997766554332221 223468999999999999999999999999999999 7888854332210 0 000
Q ss_pred cccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCccc
Q 009404 452 TPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSR 516 (535)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~~ 516 (535)
.... +...|..++..+.++|..||+.+|++||++..+++.+..+.+...-
T Consensus 918 --------------~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~ 967 (1025)
T KOG1095|consen 918 --------------LEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG 967 (1025)
T ss_pred --------------HhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence 0000 2345667778899999999999999999999999999888765443
No 16
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-42 Score=344.27 Aligned_cols=276 Identities=29% Similarity=0.425 Sum_probs=204.3
Q ss_pred CCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhc--cCCCCccceeeeeeecccCcceEEEEEe
Q 009404 229 GSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSR--LHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 229 ~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~--l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
..++||+|+||.||||++. ++.||||++... ..+.|.+|-++.+. ++|+||++++++-.........++||++
T Consensus 214 l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~ 288 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ----EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE 288 (534)
T ss_pred hHHHhhcCccceeehhhcc-CceeEEEecCHH----HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence 3567999999999999996 699999999753 33447888777665 5899999999885544434567899999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhc------CCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEA------AAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
|.++|+|.+||.. ..++|....+|+..+++||+|||+. .+|+|+|||||++||||.+|++..|+|||+|..
T Consensus 289 fh~kGsL~dyL~~---ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 289 FHPKGSLCDYLKA---NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred eccCCcHHHHHHh---ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 9999999999987 4589999999999999999999974 357899999999999999999999999999998
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCC------CCccchHHHHHHHHHHHHhCCCCCCC-cccccc--chhhhhc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGR------ASLMSDVFSFGVVLLELITGRQPIHR-SITKGE--ESLVLWA 451 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~s~ksDVwSlGvil~eLltG~~P~~~-~~~~~~--~~~~~~~ 451 (535)
+..+... ......+||.+|||||++.+.- .-.+.||||+|.+||||+++..-++. ..+... .....-.
T Consensus 366 ~~p~~~~---~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 366 LEPGKPQ---GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred ecCCCCC---cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 8765432 2344589999999999986432 23578999999999999996543321 111100 0000111
Q ss_pred cccccCcc-cccccCCCCCCCCCCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcc
Q 009404 452 TPRLQDSG-TVISELPDPRLKGDFPK-EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515 (535)
Q Consensus 452 ~~~~~~~~-~~~~~~~~~~l~~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~ 515 (535)
.+.+.+.. .++++-.+|.+....-. ...+.+.+.+..||+.||+.|.|+.-+.+.+.++....+
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 11111111 11222223333322211 335678999999999999999999999999998876543
No 17
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9e-44 Score=361.08 Aligned_cols=280 Identities=28% Similarity=0.443 Sum_probs=220.7
Q ss_pred eCHHHHHHHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeee
Q 009404 215 FSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSE 293 (535)
Q Consensus 215 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~ 293 (535)
.+..+|+...+++.....||+|.||+||+|.|. | .||||+++.... ++..+.|..|+.++++-+|.||+-++|||..
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 445778888888889999999999999999996 3 399999987643 3344669999999999999999999999986
Q ss_pred cccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEE
Q 009404 294 FRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKIT 373 (535)
Q Consensus 294 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~ 373 (535)
... .||+.||+|-+|+.+|+-.. ..|+..+.+.|++|||+||.|||.++ |||||||+.|||+.+++.|||+
T Consensus 460 ----p~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIg 530 (678)
T KOG0193|consen 460 ----PPL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIG 530 (678)
T ss_pred ----Cce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEe
Confidence 223 89999999999999998654 55999999999999999999999998 9999999999999999999999
Q ss_pred ecCCccccccCCCCCCCCCCCccccCccccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhh
Q 009404 374 DLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM---VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450 (535)
Q Consensus 374 DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~ 450 (535)
|||++.....- ..........|...|||||++. ..+|+..+||||||+++|||++|..||... . ....+|
T Consensus 531 DFGLatvk~~w---~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~--~--~dqIif 603 (678)
T KOG0193|consen 531 DFGLATVKTRW---SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ--N--RDQIIF 603 (678)
T ss_pred cccceeeeeee---ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC--C--hhheEE
Confidence 99998754432 1122233345778899999986 457899999999999999999999999621 1 111222
Q ss_pred ccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCccc-ccCCCC
Q 009404 451 ATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSR-RRNISL 522 (535)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~~-~~~~~~ 522 (535)
...+- ...+++. .....+++.|.+|+..||..++++||.+.+|+..|+.+.....+ +|+.+.
T Consensus 604 mVGrG---------~l~pd~s-~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~RS~S~ 666 (678)
T KOG0193|consen 604 MVGRG---------YLMPDLS-KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKINRSASE 666 (678)
T ss_pred Eeccc---------ccCccch-hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccccccCcCc
Confidence 21110 0011110 12234566799999999999999999999999999999886443 444443
No 18
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.2e-43 Score=358.56 Aligned_cols=266 Identities=27% Similarity=0.433 Sum_probs=206.7
Q ss_pred HHhcCCCCCcccceeCceEEEEEEE------cCCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeec
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQL------TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEF 294 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~------~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~ 294 (535)
...++|...+.||+|+||.||+|.+ .+++.||||+++..........+.+|+.++..+ +||||+++++++...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 3456788899999999999999974 235689999998654444455689999999999 899999999988642
Q ss_pred ccCcceEEEEEecCCCCCHHHhhhhcc-----------------------------------------------------
Q 009404 295 RGKRAMRLLVFEFMPNGNLRDCLDGVL----------------------------------------------------- 321 (535)
Q Consensus 295 ~~~~~~~~lV~e~~~~gsL~~~l~~~~----------------------------------------------------- 321 (535)
....++||||+++|+|.+++....
T Consensus 84 ---~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 84 ---NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred ---CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 235689999999999999986421
Q ss_pred -------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCC
Q 009404 322 -------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394 (535)
Q Consensus 322 -------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 394 (535)
...+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++........ ....
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~---~~~~ 234 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY---VRKG 234 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcch---hccc
Confidence 124778899999999999999999998 999999999999999999999999999865432111 1112
Q ss_pred ccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccccCCCCCCCCC
Q 009404 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGD 473 (535)
Q Consensus 395 ~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 473 (535)
...++..|+|||.+....++.++||||||+++|||++ |..||........ ... .+ ..-... .
T Consensus 235 ~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~--~~~----~~-------~~~~~~----~ 297 (338)
T cd05102 235 SARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE--FCQ----RL-------KDGTRM----R 297 (338)
T ss_pred CCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH--HHH----HH-------hcCCCC----C
Confidence 2346678999999998999999999999999999997 9999864322111 000 00 000001 1
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCC
Q 009404 474 FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513 (535)
Q Consensus 474 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~ 513 (535)
.+...+..+.+++.+||+.||++|||+.|+++.|+++..+
T Consensus 298 ~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 298 APENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1223345688999999999999999999999999988653
No 19
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-43 Score=345.45 Aligned_cols=261 Identities=29% Similarity=0.450 Sum_probs=207.4
Q ss_pred CCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
++...+.||+|+||+||++...+ |+..|||.+....... .+.+.+|+.+|++++|||||+++|....... ..+++.
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~--~~~~i~ 94 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSREN--DEYNIF 94 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccC--eeeEee
Confidence 45567889999999999999865 8999999998663333 4458899999999999999999997544332 367999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CCcEEEEecCCcccccc
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE-NLNAKITDLGMAKRLKA 383 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~-~~~vkL~DFGla~~~~~ 383 (535)
|||+++|+|.+++.+... .+++..+..+..||++||+|||+++ |+|+||||+||||+. ++.+||+|||++.....
T Consensus 95 mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 999999999999988655 7999999999999999999999998 999999999999999 79999999999987764
Q ss_pred CCCCCCCCCCCccccCccccCccccccCC-CCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGR-ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
.. ........+.||+.|||||++..+. ...++|||||||++.||+||..||... ........+
T Consensus 171 ~~--~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~------------ 234 (313)
T KOG0198|consen 171 KG--TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLL------------ 234 (313)
T ss_pred cc--ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHH------------
Confidence 11 1122344578999999999998643 346999999999999999999999653 101111111
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
+.........|...+....+++.+|+..||++|||+.|++++.....
T Consensus 235 --ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 235 --IGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred --HhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 11111112445556677899999999999999999999998765443
No 20
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-43 Score=363.90 Aligned_cols=258 Identities=28% Similarity=0.405 Sum_probs=217.4
Q ss_pred CCcccceeCceEEEEEEEc-C----CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 229 GSNIVGQGGSSYVYRGQLT-D----GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 229 ~~~~LG~G~fG~Vy~~~~~-~----g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
..++||+|+||+||+|.|- . .-+||+|++......+...++++|+.+|.+++|||+++|+|+|... .+.|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s-----~~ql 774 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS-----TLQL 774 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc-----hHHH
Confidence 3578999999999999873 2 4579999999888888888899999999999999999999999853 3689
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
|++||+.|.|.+|++... ..+..+..+.|..|||+||.|||++. ++||||.++||||.+-..+||+|||+++.+..
T Consensus 775 vtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred HHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence 999999999999998743 56889999999999999999999998 99999999999999999999999999999877
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
++..-. .....-.+.|||-|.+....++.++|||||||++|||+| |..|++.....+ +
T Consensus 851 d~~ey~---~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e------------------I 909 (1177)
T KOG1025|consen 851 DEKEYS---APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE------------------I 909 (1177)
T ss_pred cccccc---ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH------------------h
Confidence 653221 112233577999999999999999999999999999999 889987543321 1
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCccc
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSR 516 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~~ 516 (535)
.++.....+...|+.+..++..++.+||..|++.||+++++...+.+++.+...
T Consensus 910 ~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqr 963 (1177)
T KOG1025|consen 910 PDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQR 963 (1177)
T ss_pred hHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcce
Confidence 222222223456777788899999999999999999999999999999887653
No 21
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.1e-43 Score=328.58 Aligned_cols=266 Identities=26% Similarity=0.416 Sum_probs=206.1
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
+.|+.+.++|+|++|.||+.+.++ |+.||||++..... +...+..++|+++|++++|+|+|.++.+|.. ....+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr----krklh 77 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR----KRKLH 77 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh----cceeE
Confidence 356778899999999999999876 99999999986644 3344557899999999999999999999876 55779
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
||+||++. ++.+-|+.. ..+++.....+++.|++.|+.|+|+++ ++||||||+||||+.++.+||+|||+|+.+.
T Consensus 78 LVFE~~dh-TvL~eLe~~-p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~ 152 (396)
T KOG0593|consen 78 LVFEYCDH-TVLHELERY-PNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLS 152 (396)
T ss_pred EEeeecch-HHHHHHHhc-cCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhc
Confidence 99999976 555556553 466999999999999999999999998 9999999999999999999999999999886
Q ss_pred cCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccc------
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL------ 455 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~------ 455 (535)
.. +...+..+.|.+|.|||.+.+ ..|...+|||++||++.||++|.+.|....+-+.-.........+
T Consensus 153 ~p-----gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~ 227 (396)
T KOG0593|consen 153 AP-----GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQS 227 (396)
T ss_pred CC-----cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHH
Confidence 32 345677889999999999887 789999999999999999999999886544332211111111110
Q ss_pred -cCccccccc--CCCCCC----CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 456 -QDSGTVISE--LPDPRL----KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 456 -~~~~~~~~~--~~~~~l----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
......+.. ++.+.- ...+| ..+..+.++++.||+.||++|++-+|++.
T Consensus 228 iF~~N~~F~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 228 IFSSNPFFHGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred HhccCCceeeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 000111111 111111 11222 23456899999999999999999999985
No 22
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-43 Score=361.69 Aligned_cols=267 Identities=27% Similarity=0.395 Sum_probs=214.9
Q ss_pred HHHHHhcCCCCCcccceeCceEEEEEEEcC--C---cEEEEEEecc--CCCCChhHHHHHHHHHHhccCCCCccceeeee
Q 009404 219 ALEHATDKFSGSNIVGQGGSSYVYRGQLTD--G---RIVAVKRFKT--QGGPNADSVFLTEVDMLSRLHHCHVVPLVGYC 291 (535)
Q Consensus 219 ~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~--g---~~vaVK~l~~--~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~ 291 (535)
.|+...++....++||+|+||.||+|++.. + ..||||..+. ....+...+|..|+++|++++|||||+++|++
T Consensus 151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa 230 (474)
T KOG0194|consen 151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA 230 (474)
T ss_pred ccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 455556667777999999999999998753 2 2389999985 34455567799999999999999999999999
Q ss_pred eecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEE
Q 009404 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371 (535)
Q Consensus 292 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vk 371 (535)
.. ...+++|||+|+||+|.++|+... ..++..+++.++.++|.||+|||+++ ++||||.++|+|++.++.+|
T Consensus 231 ~~----~~Pl~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vK 302 (474)
T KOG0194|consen 231 VL----EEPLMLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVK 302 (474)
T ss_pred cC----CCccEEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEE
Confidence 87 557799999999999999998753 36999999999999999999999998 99999999999999999999
Q ss_pred EEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhh
Q 009404 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLW 450 (535)
Q Consensus 372 L~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~ 450 (535)
|+|||+++.-..... ....-.-+..|+|||.+..+.++.++|||||||++||+++ |..||.......-
T Consensus 303 ISDFGLs~~~~~~~~-----~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v------ 371 (474)
T KOG0194|consen 303 ISDFGLSRAGSQYVM-----KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEV------ 371 (474)
T ss_pred eCccccccCCcceee-----ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHH------
Confidence 999999876541110 0101134578999999999999999999999999999999 7889865433211
Q ss_pred ccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcc
Q 009404 451 ATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515 (535)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~ 515 (535)
...+.....+...|...+..+..++..||..+|++||||.++.+.|+.+.....
T Consensus 372 -----------~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 372 -----------KAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred -----------HHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 111212222233444556668889999999999999999999999999976644
No 23
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-43 Score=349.60 Aligned_cols=255 Identities=27% Similarity=0.358 Sum_probs=208.2
Q ss_pred hcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCCh--hHHHHHHHHHHhcc-CCCCccceeeeeeecccCcc
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNA--DSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~--~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 299 (535)
.++|...+.||+|+|++|++|+..+ ++.+|||++.......+ .+-...|-++|.+| .||.|++|+-.|.+ ..
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD----~~ 147 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD----EE 147 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec----cc
Confidence 4678888999999999999998754 89999999976532211 22366788999999 89999999988887 55
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
.+|+|+||+++|+|.++|++. ..+++.....++.+|+.||+|||++| ||||||||+|||||+|++++|+|||.|+
T Consensus 148 sLYFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 148 SLYFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred ceEEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccc
Confidence 679999999999999999876 56999999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCC----CC----CCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhc
Q 009404 380 RLKADGLP----SC----SSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA 451 (535)
Q Consensus 380 ~~~~~~~~----~~----~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~ 451 (535)
.+...... .. ......++||..|.+||++..+..+..+|+|+||||||+|+.|.+||....+- -
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney---l----- 294 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY---L----- 294 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH---H-----
Confidence 88653221 01 11125589999999999999999999999999999999999999999654321 0
Q ss_pred cccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 452 TPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.++++..- .-.+|+..++.+.+|+.+.|..||.+|+|..||-++
T Consensus 295 ---------iFqkI~~l--~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 295 ---------IFQKIQAL--DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred ---------HHHHHHHh--cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 11111111 123445555668999999999999999999888764
No 24
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-42 Score=335.95 Aligned_cols=265 Identities=25% Similarity=0.366 Sum_probs=213.0
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+.|+....||.|..++||+|+.. .++.||||++.-+........+.+|+..|+.++||||++++..|.. +..+|+
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv----~~~LWv 101 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVV----DSELWV 101 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEe----cceeEE
Confidence 56777889999999999999854 4899999999877665556678999999999999999999999987 567899
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||.||.+||+.+.+......++++..+..|++++++||.|||.+| .||||||+.||||+++|.|||+|||.+..+..
T Consensus 102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 999999999999999888888999999999999999999999999 99999999999999999999999999988776
Q ss_pred CCCCCCCCCCCccccCccccCcccccc--CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMV--GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
.+. ......+.++||+.|||||++.. .-|+.|+||||||++..||.+|..||....+-..--......+....
T Consensus 179 ~G~-R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~---- 253 (516)
T KOG0582|consen 179 SGD-RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL---- 253 (516)
T ss_pred cCc-eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc----
Confidence 552 22222267899999999999653 45899999999999999999999999765432110000000000000
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
...+..+........+.+++..||+.||++|||++++++.
T Consensus 254 -----t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 254 -----TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred -----cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 0011111122234468899999999999999999999973
No 25
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-41 Score=337.23 Aligned_cols=251 Identities=22% Similarity=0.368 Sum_probs=200.7
Q ss_pred CcccceeCceEEEEEEEcCCcEEEEEEeccCCCCCh--hHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEec
Q 009404 230 SNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNA--DSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~--~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
...||+|++|.||+|.+ +|+.||||+++....... .+.|.+|+.+|++++||||++++|++.+........++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999998 589999999976532221 345789999999999999999999987643334567999999
Q ss_pred CCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEA-AAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 308 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
+++|+|.+++... +.+++.....++.+++.||.|||+. + ++||||||+|||+++++.+||+|||+++......
T Consensus 104 ~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 104 CTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred CCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 9999999999764 4689999999999999999999985 5 7899999999999999999999999988654321
Q ss_pred CCCCCCCCccccCccccCcccccc--CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccccc
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMV--GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (535)
....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||............ ...
T Consensus 178 -------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i-------------~~~ 237 (283)
T PHA02988 178 -------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLI-------------INK 237 (283)
T ss_pred -------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHH-------------Hhc
Confidence 22357889999999876 68999999999999999999999999654321110000 000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 465 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
...+ ..+...+..+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 238 ~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 238 NNSL----KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred CCCC----CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 0111 122234556899999999999999999999999998763
No 26
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-42 Score=348.71 Aligned_cols=251 Identities=26% Similarity=0.423 Sum_probs=210.3
Q ss_pred hcCCCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
...|....+||+|+.|.||.+.. .+++.||||++..... ...+.+++|+.+|+..+|+|||+++..+.. ...+|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q-~~keLilnEi~Vm~~~~H~NiVnfl~Sylv----~deLW 346 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ-PKKELLLNEILVMRDLHHPNIVNFLDSYLV----GDELW 346 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC-CchhhhHHHHHHHHhccchHHHHHHHHhcc----cceeE
Confidence 35677788999999999999975 4588999999987653 334458899999999999999999988876 35679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+|||||++|+|.+.+.. ..+++.++..|++++++||+|||.++ |+|||||++|||++.++.+||+|||++..+.
T Consensus 347 VVMEym~ggsLTDvVt~---~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~ 420 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTK---TRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQIS 420 (550)
T ss_pred EEEeecCCCchhhhhhc---ccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccc
Confidence 99999999999999876 34899999999999999999999999 9999999999999999999999999998876
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
... ......+||+.|||||++....|..|.||||||++++||+.|++||....+-.. .| . +
T Consensus 421 ~~~-----~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA----ly---L-------I 481 (550)
T KOG0578|consen 421 EEQ-----SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA----LY---L-------I 481 (550)
T ss_pred ccc-----CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHH----HH---H-------H
Confidence 543 245678999999999999999999999999999999999999999964322111 00 1 1
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.....+. ...+...+..+.+++.+||+.|+++||++.|+|++
T Consensus 482 a~ng~P~--lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 482 ATNGTPK--LKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred hhcCCCC--cCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 1111222 23456677889999999999999999999999984
No 27
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-43 Score=344.95 Aligned_cols=268 Identities=26% Similarity=0.339 Sum_probs=208.7
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccC-CCCccceeeeeeecccCcceE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~~~ 301 (535)
-++|...++||.|.||+||+|+-. +|..||||+++..-..-.+-.-++|++.|++|+ ||||+++..++.+.. ..+
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~---~~L 85 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND---RIL 85 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC---ceE
Confidence 456777889999999999999854 589999999987644333333579999999997 999999999988732 278
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||| ..+|++.++.+ .+.+++..+..|+.||++||+|+|.+| ++|||+||+|||+..+..+||+|||+|+.+
T Consensus 86 ~fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 86 YFVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eeeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccc
Confidence 9999999 56999999876 677999999999999999999999999 999999999999998889999999999988
Q ss_pred ccCCCCCCCCCCCccccCccccCccccc-cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhc--cccccCc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA--TPRLQDS 458 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~--~~~~~~~ 458 (535)
... ...+..+.|.+|.|||++. .+.|+.+.|||++|||++||.+-++.|.+...-++-..+..+ .+.....
T Consensus 161 ~Sk------pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~ 234 (538)
T KOG0661|consen 161 RSK------PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSW 234 (538)
T ss_pred ccC------CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccc
Confidence 653 3456788999999999875 678999999999999999999988888654333221111111 1110000
Q ss_pred c----------cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 459 G----------TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 459 ~----------~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
. -.+.......+..-.+. .+....+++.+|+..||++|||+.|.+++
T Consensus 235 ~eg~~La~~mnf~~P~~~~~~l~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 235 PEGYNLASAMNFRFPQVKPSPLKDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hhHHHHHHHhccCCCcCCCCChHHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 0 00011111111222233 55668899999999999999999999985
No 28
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.4e-42 Score=340.33 Aligned_cols=270 Identities=28% Similarity=0.376 Sum_probs=205.5
Q ss_pred cCCCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCCCCCh-hHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNA-DSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~~~~~-~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
+.|+..++||+|.||.||+|+. .+|+.||+|++..+..... ..-..+||.+|++|+||||++|.+...+.. ...+|
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~--~~siY 194 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL--SGSIY 194 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecC--CceEE
Confidence 4566678899999999999985 4699999999987653333 334679999999999999999999988742 34679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
||+|||+. +|.-++... .-.|++.++..++.|++.||+|+|.++ |+|||||.+|||||++|.+||+|||||+++.
T Consensus 195 lVFeYMdh-DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 195 LVFEYMDH-DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEEecccc-hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeecc
Confidence 99999965 898888653 245999999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhh-ccccccCccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW-ATPRLQDSGT 460 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~-~~~~~~~~~~ 460 (535)
... ....+..+-|.+|.|||.+.+ ..|+.+.|+||.||||.||+.|++.|...........+.. ....-++.+.
T Consensus 270 ~~~----~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~ 345 (560)
T KOG0600|consen 270 PSG----SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP 345 (560)
T ss_pred CCC----CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc
Confidence 543 223566788999999999886 4699999999999999999999999976654322111110 0000001111
Q ss_pred ccccCCCCCC-C--CCC-------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 461 VISELPDPRL-K--GDF-------PKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 461 ~~~~~~~~~l-~--~~~-------~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..+++.... . ..+ -...+....+|+..+|..||++|.|+.++++.
T Consensus 346 -~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 346 -VSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred -cccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 111111000 0 000 11223457789999999999999999999863
No 29
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-42 Score=348.29 Aligned_cols=268 Identities=26% Similarity=0.378 Sum_probs=227.7
Q ss_pred HHHHHHHhcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecc
Q 009404 217 YSALEHATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFR 295 (535)
Q Consensus 217 ~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~ 295 (535)
+++||--..+.....+||-|.+|.||.|.|+. .-.||||.++.+. ...++|+.|..+|+.++|||+|+|+|+|..
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt--MeveEFLkEAAvMKeikHpNLVqLLGVCT~-- 334 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTH-- 334 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc--hhHHHHHHHHHHHHhhcCccHHHHhhhhcc--
Confidence 35677667777778999999999999999976 6679999998764 344569999999999999999999999986
Q ss_pred cCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEec
Q 009404 296 GKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDL 375 (535)
Q Consensus 296 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DF 375 (535)
....|||+|||.+|+|.+||++.....++...++.++.||+.||+||..++ +|||||.++|+||.++..||++||
T Consensus 335 --EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADF 409 (1157)
T KOG4278|consen 335 --EPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADF 409 (1157)
T ss_pred --CCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeecc
Confidence 456799999999999999999887777888999999999999999999998 999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhcccc
Q 009404 376 GMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454 (535)
Q Consensus 376 Gla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~ 454 (535)
|+++.+..+.+.... ...-++.|+|||.+....++.|+|||+|||+||||.| |-.||..-.- +
T Consensus 410 GLsRlMtgDTYTAHA----GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl----S-------- 473 (1157)
T KOG4278|consen 410 GLSRLMTGDTYTAHA----GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----S-------- 473 (1157)
T ss_pred chhhhhcCCceeccc----CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH----H--------
Confidence 999998877554322 2223578999999999999999999999999999999 6677743211 1
Q ss_pred ccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcc
Q 009404 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515 (535)
Q Consensus 455 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~ 515 (535)
.+-.+....++...|+.|+..+++||+.||+.+|.+||++.|+-+.++.+..+.+
T Consensus 474 ------qVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sS 528 (1157)
T KOG4278|consen 474 ------QVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSS 528 (1157)
T ss_pred ------HHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcccc
Confidence 1123344455556678888889999999999999999999999999999987655
No 30
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.5e-41 Score=347.64 Aligned_cols=261 Identities=24% Similarity=0.376 Sum_probs=202.6
Q ss_pred HhcCCCCCcccceeCceEEEEEEE------cCCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeecc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQL------TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFR 295 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~------~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~ 295 (535)
..++|+..+.||+|+||.||+|++ .++..||||+++........+.+.+|+.++..+ +||||+++++++.+
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~-- 110 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV-- 110 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc--
Confidence 345688889999999999999974 236689999997654444455688999999999 89999999999876
Q ss_pred cCcceEEEEEecCCCCCHHHhhhhcc------------------------------------------------------
Q 009404 296 GKRAMRLLVFEFMPNGNLRDCLDGVL------------------------------------------------------ 321 (535)
Q Consensus 296 ~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------------------------------------ 321 (535)
....++||||+++|+|.++++...
T Consensus 111 --~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 111 --GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred --CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 345699999999999999986421
Q ss_pred -------------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 322 -------------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 322 -------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
...+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceecc
Confidence 124788899999999999999999998 9999999999999999999999999998764
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
..... .......++..|+|||.+....++.++||||||+++|||++ |..||....... ......
T Consensus 266 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~~~---------- 330 (375)
T cd05104 266 NDSNY---VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYKMI---------- 330 (375)
T ss_pred Ccccc---cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHHHH----------
Confidence 43211 11112335678999999999999999999999999999998 888885432211 111000
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
... .....+...+..+.+|+.+||+.||++|||+.||++.|++.
T Consensus 331 -~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 331 -KEG----YRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -HhC----ccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 000 00011112234588999999999999999999999999864
No 31
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=9e-41 Score=308.59 Aligned_cols=267 Identities=25% Similarity=0.361 Sum_probs=204.7
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCCh-hHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNA-DSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~-~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
.+|...++||+|.||.||+|++. +|+.||||+++.....+. ....++|++.|+.++|+||+.+++++.. .....
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~----~~~l~ 77 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH----KSNLS 77 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC----CCceE
Confidence 35667788999999999999864 599999999986643322 3447899999999999999999999987 44568
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
||+|||+ .+|+..++... ..+...++..++.++++||+|+|++. |+||||||.|+|++++|.+||+|||+|+.+.
T Consensus 78 lVfEfm~-tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~ 152 (318)
T KOG0659|consen 78 LVFEFMP-TDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFG 152 (318)
T ss_pred EEEEecc-ccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccC
Confidence 9999995 59999997643 45899999999999999999999999 9999999999999999999999999999887
Q ss_pred cCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhh--hccccccCcc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL--WATPRLQDSG 459 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~--~~~~~~~~~~ 459 (535)
.... .....+.|.+|.|||.+.+ ..|+...||||.|||+.||+-|.+-|....+-+.-.... ...+...+..
T Consensus 153 ~p~~-----~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP 227 (318)
T KOG0659|consen 153 SPNR-----IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWP 227 (318)
T ss_pred CCCc-----ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCc
Confidence 6432 2233478999999999886 458999999999999999999876665443332211111 1111111110
Q ss_pred --------cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 460 --------TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 460 --------~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..++..+.+.+..-++.. .....+|+..+|..||.+|+|+.|++++
T Consensus 228 ~~~~lpdY~~~~~~P~~~~~~lf~aa-s~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 228 EMTSLPDYVKIQQFPKPPLNNLFPAA-SSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cccccccHHHHhcCCCCccccccccc-cHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111222333333333333 3446899999999999999999999985
No 32
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=7.2e-41 Score=346.58 Aligned_cols=264 Identities=24% Similarity=0.396 Sum_probs=204.7
Q ss_pred HHHhcCCCCCcccceeCceEEEEEEEc------CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeee
Q 009404 221 EHATDKFSGSNIVGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSE 293 (535)
Q Consensus 221 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~ 293 (535)
....++|...+.||+|+||.||+|++. ++..||||+++..........+.+|+++++.+ +|+||+++++++.+
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~ 113 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH 113 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence 334467888999999999999998742 24579999998665444455688999999999 89999999999876
Q ss_pred cccCcceEEEEEecCCCCCHHHhhhhcc----------------------------------------------------
Q 009404 294 FRGKRAMRLLVFEFMPNGNLRDCLDGVL---------------------------------------------------- 321 (535)
Q Consensus 294 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------------------------------------------- 321 (535)
....++||||+++|+|.++++...
T Consensus 114 ----~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (374)
T cd05106 114 ----GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSS 189 (374)
T ss_pred ----CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccc
Confidence 346799999999999999985421
Q ss_pred ----------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 322 ----------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 322 ----------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
...+++..+++++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 190 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~ 266 (374)
T cd05106 190 SSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS 266 (374)
T ss_pred cccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCc
Confidence 123788899999999999999999998 9999999999999999999999999997654322
Q ss_pred CCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCccccccc
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (535)
.. .......++..|+|||++....++.++||||||+++|||++ |+.||........ .... +..
T Consensus 267 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~--~~~~-----------~~~ 330 (374)
T cd05106 267 NY---VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK--FYKM-----------VKR 330 (374)
T ss_pred ce---eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH--HHHH-----------HHc
Confidence 10 11122335678999999998899999999999999999997 9999864322111 0000 000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 465 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
......+...+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 331 ----~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 331 ----GYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ----ccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 0011111222355889999999999999999999999999864
No 33
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.5e-40 Score=334.61 Aligned_cols=264 Identities=27% Similarity=0.419 Sum_probs=200.0
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-----------------CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccce
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-----------------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPL 287 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-----------------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l 287 (535)
++|...+.||+|+||.||++.+.+ +..||+|.+...........|.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 567778999999999999998642 347999999865444445669999999999999999999
Q ss_pred eeeeeecccCcceEEEEEecCCCCCHHHhhhhcc-----------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 009404 288 VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVL-----------------VEGMNWDTRVAIAIGAARGLEYLHEAAAP 350 (535)
Q Consensus 288 ~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~ 350 (535)
++++.+ ....++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+
T Consensus 85 ~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-- 158 (304)
T cd05096 85 LGVCVD----EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-- 158 (304)
T ss_pred EEEEec----CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC--
Confidence 999876 345799999999999999985421 123688899999999999999999998
Q ss_pred CeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHH
Q 009404 351 RILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELI 430 (535)
Q Consensus 351 ~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLl 430 (535)
|+||||||+|||+++++.+||+|||+++........ .......++..|+|||++..+.++.++||||||+++|||+
T Consensus 159 -ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 234 (304)
T cd05096 159 -FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY---RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234 (304)
T ss_pred -ccccCcchhheEEcCCccEEECCCccceecccCcee---EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHH
Confidence 999999999999999999999999999865433211 1122334578899999998889999999999999999999
Q ss_pred h--CCCCCCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 431 T--GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 431 t--G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
+ +..||....... ........+.... .......+..++..+.+++.+||+.||++|||+.||.+.|+
T Consensus 235 ~~~~~~p~~~~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 235 MLCKEQPYGELTDEQ---VIENAGEFFRDQG--------RQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HccCCCCCCcCCHHH---HHHHHHHHhhhcc--------ccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 7 456775432211 1100000000000 00000112233456899999999999999999999999886
Q ss_pred h
Q 009404 509 T 509 (535)
Q Consensus 509 ~ 509 (535)
+
T Consensus 304 ~ 304 (304)
T cd05096 304 E 304 (304)
T ss_pred C
Confidence 3
No 34
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2e-40 Score=327.14 Aligned_cols=256 Identities=23% Similarity=0.358 Sum_probs=203.1
Q ss_pred cCCCCCcccceeCceEEEEEEEc----CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT----DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
++|+..+.||+|+||.||+|.+. .+..||+|+++..........|.+|+.+++.++||||+++++++.. ...
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~ 80 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR----GNT 80 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec----CCC
Confidence 45777899999999999999864 3678999999876544445568999999999999999999999875 446
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+|||++.++.++++|||.+..
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 81 MMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred cEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCccccc
Confidence 799999999999999997542 45899999999999999999999998 99999999999999999999999998765
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
...... .......++..|+|||.+....++.++||||||+++||+++ |..||....... ....
T Consensus 157 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~~~--------- 220 (266)
T cd05064 157 DKSEAI----YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VIKA--------- 220 (266)
T ss_pred ccccch----hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHH---------
Confidence 432211 11112335678999999999999999999999999999875 999986432211 0000
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
+.+... ...+..++..+.+++.+||+.+|++||++.|+++.|.++
T Consensus 221 --~~~~~~----~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 221 --VEDGFR----LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred --HHCCCC----CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 000000 112333455688999999999999999999999999865
No 35
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.5e-41 Score=332.34 Aligned_cols=250 Identities=32% Similarity=0.532 Sum_probs=192.7
Q ss_pred CcccceeCceEEEEEEEc-----CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 230 SNIVGQGGSSYVYRGQLT-----DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~-----~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
.+.||.|.||.||+|.+. .+..|+||+++........+.|.+|++.+++++||||++++|++.. ....++|
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~----~~~~~lv 79 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE----NEPLFLV 79 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES----SSSEEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccc----ccccccc
Confidence 467999999999999987 2678999999765444446779999999999999999999999984 3347999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+++|+|.++|.......+++..+..|+.||+.||+|||+.+ ++|+||+++|||+++++.+||+|||++......
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence 99999999999998865567999999999999999999999998 999999999999999999999999999876322
Q ss_pred CCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
... ...........|+|||.+....++.++||||||+++|||++ |+.||...... ..... +.
T Consensus 157 ~~~---~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~---~~~~~----~~------- 219 (259)
T PF07714_consen 157 SKY---KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE---EIIEK----LK------- 219 (259)
T ss_dssp SSE---EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH---HHHHH----HH-------
T ss_pred ccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccc----cc-------
Confidence 111 11222346678999999999999999999999999999999 67887544221 10000 00
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
+... ...+..++..+.+++..||..||++|||+.++++.|
T Consensus 220 ~~~~----~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 220 QGQR----LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TTEE----TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cccc----ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 0000 112223345588999999999999999999999986
No 36
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.5e-40 Score=329.97 Aligned_cols=252 Identities=23% Similarity=0.366 Sum_probs=200.1
Q ss_pred CCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
|+..+.||+|+||+||++... +++.||||.+..... ......+.+|+++++.++|+||+++++++.+ ....++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~----~~~~~l 77 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET----KDALCL 77 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc----CCeEEE
Confidence 666789999999999999864 689999999875422 2223457899999999999999999998876 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.++|+|||++.....
T Consensus 78 v~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 78 VLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPE 154 (285)
T ss_pred EEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence 999999999998886544456899999999999999999999998 99999999999999999999999999986543
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
.. ......||..|+|||++.+..++.++|||||||++|||++|+.||............. .
T Consensus 155 ~~------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~-------------~ 215 (285)
T cd05631 155 GE------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVD-------------R 215 (285)
T ss_pred CC------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHH-------------H
Confidence 21 1233468999999999999999999999999999999999999997543221111000 0
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT-----MSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~~ 506 (535)
.+... ...++...+..+.+|+.+||+.||++||+ ++++++.
T Consensus 216 ~~~~~--~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 216 RVKED--QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred Hhhcc--cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 00000 11223334456889999999999999997 8888874
No 37
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.5e-40 Score=328.98 Aligned_cols=258 Identities=27% Similarity=0.456 Sum_probs=204.8
Q ss_pred cCCCCCcccceeCceEEEEEEEcC------CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKR 298 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 298 (535)
++|+..+.||+|+||.||+|.... ...||+|.+...........|.+|+++++.++||||+++++++.. .
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~----~ 80 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK----E 80 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC----C
Confidence 357778999999999999998643 257999999865544445668999999999999999999999875 3
Q ss_pred ceEEEEEecCCCCCHHHhhhhccc--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVLV--------------EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl 364 (535)
...+++|||+++++|.+++..... ..+++..+..++.|++.||+|||+.+ ++|+||||+||++
T Consensus 81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~ 157 (283)
T cd05048 81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLV 157 (283)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEE
Confidence 456999999999999999965321 44888999999999999999999998 9999999999999
Q ss_pred CCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccc
Q 009404 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKG 443 (535)
Q Consensus 365 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~ 443 (535)
++++.++|+|||++......... .......+++.|+|||.+....++.++||||||+++|||++ |..||.......
T Consensus 158 ~~~~~~~L~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~ 234 (283)
T cd05048 158 GEGLTVKISDFGLSRDIYSADYY---RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE 234 (283)
T ss_pred cCCCcEEECCCcceeeccccccc---cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 99999999999999865433211 11223456788999999998899999999999999999998 999986533211
Q ss_pred cchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 444 EESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
.... +.. ......+...+..+.+|+.+||+.||++||++.||++.|+.+
T Consensus 235 ---~~~~-----------i~~----~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 235 ---VIEM-----------IRS----RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred ---HHHH-----------HHc----CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1000 000 001112334456699999999999999999999999999753
No 38
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-40 Score=336.69 Aligned_cols=253 Identities=25% Similarity=0.329 Sum_probs=205.2
Q ss_pred HhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC---C-ChhHHHHHHHHHHhccC-CCCccceeeeeeeccc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG---P-NADSVFLTEVDMLSRLH-HCHVVPLVGYCSEFRG 296 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~---~-~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~ 296 (535)
..++|...+.||+|+||+|+.|... +++.||+|++..... . ...+.+.+|+.+++.++ ||||++++.++..
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t--- 91 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT--- 91 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec---
Confidence 4567888999999999999999764 589999997765311 1 23344678999999998 9999999999876
Q ss_pred CcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-CcEEEEec
Q 009404 297 KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN-LNAKITDL 375 (535)
Q Consensus 297 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~-~~vkL~DF 375 (535)
....++||||+.+|+|.+++.. ..++.+..+..++.|++.|++|+|+++ |+||||||+|||++.+ +++||+||
T Consensus 92 -~~~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DF 165 (370)
T KOG0583|consen 92 -PTKIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDF 165 (370)
T ss_pred -CCeEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEecc
Confidence 3458999999999999999987 366899999999999999999999999 9999999999999999 99999999
Q ss_pred CCccccccCCCCCCCCCCCccccCccccCccccccCC-CC-ccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccc
Q 009404 376 GMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR-AS-LMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453 (535)
Q Consensus 376 Gla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~ 453 (535)
|++...... ........||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+........
T Consensus 166 G~s~~~~~~-----~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~-------- 232 (370)
T KOG0583|consen 166 GLSAISPGE-----DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLY-------- 232 (370)
T ss_pred ccccccCCC-----CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHH--------
Confidence 999987411 23456789999999999999876 74 8899999999999999999999763221110
Q ss_pred cccCcccccccCCCCCCCCCCCHHH-HHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 454 RLQDSGTVISELPDPRLKGDFPKEE-MQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 454 ~~~~~~~~~~~~~~~~l~~~~~~~~-~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
..+.... -.+|... +..+..|+.+||..||.+|+|+.++++.=+
T Consensus 233 ---------~ki~~~~--~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w 277 (370)
T KOG0583|consen 233 ---------RKIRKGE--FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPW 277 (370)
T ss_pred ---------HHHhcCC--ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChh
Confidence 0111111 1223333 566899999999999999999999995433
No 39
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.6e-40 Score=334.04 Aligned_cols=270 Identities=24% Similarity=0.339 Sum_probs=204.5
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
.++|+..+.||+|+||.||+++.. ++..+|+|.+...........+.+|+++|+.++||||+++++++.. ....+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~ 79 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS----DGEIS 79 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE----CCEEE
Confidence 467888999999999999999976 4889999999865444445568999999999999999999999876 44679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ .|+||||||+|||+++++.+||+|||++....
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 155 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (331)
T ss_pred EEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence 999999999999999754 45899999999999999999999863 39999999999999999999999999987654
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhh------------
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW------------ 450 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~------------ 450 (535)
.. ......||..|+|||.+.+..++.++||||||+++|||++|+.||..............
T Consensus 156 ~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (331)
T cd06649 156 DS-------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHS 228 (331)
T ss_pred cc-------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccc
Confidence 32 12334689999999999988999999999999999999999999964322110000000
Q ss_pred ccccccCcccc-----------------cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 451 ATPRLQDSGTV-----------------ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 451 ~~~~~~~~~~~-----------------~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
..+........ ...+.............+..+.+|+.+||+.||++|||+.|++++..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 229 ISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred cCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 00000000000 00000000000001123456899999999999999999999998754
No 40
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.8e-40 Score=343.14 Aligned_cols=265 Identities=25% Similarity=0.389 Sum_probs=207.0
Q ss_pred HHHhcCCCCCcccceeCceEEEEEEEcC------CcEEEEEEeccCCCCChhHHHHHHHHHHhccC-CCCccceeeeeee
Q 009404 221 EHATDKFSGSNIVGQGGSSYVYRGQLTD------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HCHVVPLVGYCSE 293 (535)
Q Consensus 221 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~~------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~ 293 (535)
+...++|.+.++||+|+||.||+|++.. +..||||++.........+.+.+|+++|+.+. ||||+++++++.+
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 3345678888999999999999998632 34699999976554445567999999999995 9999999999876
Q ss_pred cccCcceEEEEEecCCCCCHHHhhhhcc----------------------------------------------------
Q 009404 294 FRGKRAMRLLVFEFMPNGNLRDCLDGVL---------------------------------------------------- 321 (535)
Q Consensus 294 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------------------------------------------- 321 (535)
....++||||+++|+|.++|....
T Consensus 113 ----~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 113 ----SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred ----CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 446799999999999999986421
Q ss_pred ------------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 009404 322 ------------------------------------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKS 359 (535)
Q Consensus 322 ------------------------------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~ 359 (535)
...+++..++.++.|++.||+|||+.+ |+||||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp 265 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAA 265 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCh
Confidence 124788889999999999999999998 99999999
Q ss_pred CCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCC
Q 009404 360 SNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHR 438 (535)
Q Consensus 360 ~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~ 438 (535)
+|||+++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||..
T Consensus 266 ~Nill~~~~~~kL~DfGla~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~ 342 (400)
T cd05105 266 RNVLLAQGKIVKICDFGLARDIMHDSNY---VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPG 342 (400)
T ss_pred HhEEEeCCCEEEEEeCCcceeccccccc---cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcc
Confidence 9999999999999999999866432211 11223346788999999998899999999999999999997 8899864
Q ss_pred ccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCC
Q 009404 439 SITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAP 512 (535)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~ 512 (535)
........ .. +..- .....+...+..+.+++.+||+.||++|||+.+|.+.|+++.+
T Consensus 343 ~~~~~~~~--~~-----------~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 343 MIVDSTFY--NK-----------IKSG----YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred cchhHHHH--HH-----------HhcC----CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 32211100 00 0000 0111223344568999999999999999999999999998764
No 41
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-41 Score=313.71 Aligned_cols=237 Identities=27% Similarity=0.346 Sum_probs=201.2
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||.|+||.|.+++.+. |..+|+|++....- ....+....|..+|+.+.||+++++.+.+.+ ...+
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d----~~~l 119 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD----NSNL 119 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc----CCeE
Confidence 457778999999999999999764 88999999986532 2223446789999999999999999998887 5578
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||.+||-|..+|++. .++++..+..++.||+.||+|||+.+ |++|||||+|||+|.+|.+||+|||+|+..
T Consensus 120 ymvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v 194 (355)
T KOG0616|consen 120 YMVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRV 194 (355)
T ss_pred EEEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEe
Confidence 9999999999999999875 66999999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
... .-..+||+.|+|||.+....+..++|.|+|||++|||+.|.+||....... .
T Consensus 195 ~~r--------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~-----------------i 249 (355)
T KOG0616|consen 195 SGR--------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ-----------------I 249 (355)
T ss_pred cCc--------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH-----------------H
Confidence 532 445789999999999999999999999999999999999999997654421 1
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~R 497 (535)
.+++....+ .+|......+.+|+...|+.|-.+|
T Consensus 250 Y~KI~~~~v--~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 250 YEKILEGKV--KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred HHHHHhCcc--cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 122222222 3566666678999999999999988
No 42
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1e-40 Score=338.01 Aligned_cols=262 Identities=28% Similarity=0.468 Sum_probs=219.7
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEcC-----CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeeccc
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLTD-----GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG 296 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~~-----g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~ 296 (535)
...+..+..+.||+|.||.||+|...+ .-.||||.-+.+.+.+..+.|+.|..+|+.++||||++++|+|.+
T Consensus 386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e--- 462 (974)
T KOG4257|consen 386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE--- 462 (974)
T ss_pred eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec---
Confidence 334455567889999999999998643 236999999988888888889999999999999999999999986
Q ss_pred CcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecC
Q 009404 297 KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLG 376 (535)
Q Consensus 297 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFG 376 (535)
...+||||.++.|-|+.||+.+ ...++......++.||..||+|||+.. ++||||..+||||...--|||+|||
T Consensus 463 --~P~WivmEL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFG 536 (974)
T KOG4257|consen 463 --QPMWIVMELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFG 536 (974)
T ss_pred --cceeEEEecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccc
Confidence 3569999999999999999864 356999999999999999999999997 9999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccc
Q 009404 377 MAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRL 455 (535)
Q Consensus 377 la~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~ 455 (535)
+++.+..+.+...+ ...-+..|||||.+.-.+++.+||||.|||-+||+++ |..||+.....+
T Consensus 537 LSR~~ed~~yYkaS----~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD------------ 600 (974)
T KOG4257|consen 537 LSRYLEDDAYYKAS----RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD------------ 600 (974)
T ss_pred hhhhccccchhhcc----ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc------------
Confidence 99999887654322 2234578999999999999999999999999999998 899997644331
Q ss_pred cCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCc
Q 009404 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514 (535)
Q Consensus 456 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~ 514 (535)
++..+. ..-+.+.|+.++..++.|+.+||..+|.+||++.|+...|.++.++.
T Consensus 601 -----VI~~iE-nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qee 653 (974)
T KOG4257|consen 601 -----VIGHIE-NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEE 653 (974)
T ss_pred -----eEEEec-CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHh
Confidence 111111 11133567777788999999999999999999999999999987743
No 43
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=329.76 Aligned_cols=269 Identities=24% Similarity=0.337 Sum_probs=212.8
Q ss_pred HHHHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-------------CChhHHHHHHHHHHhccCCCCc
Q 009404 219 ALEHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-------------PNADSVFLTEVDMLSRLHHCHV 284 (535)
Q Consensus 219 ~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-------------~~~~~~~~~Ei~~l~~l~H~ni 284 (535)
+-....++|++.+.||+|.||.|-+|+.. +++.||||++..... ....+...+|+.+|++++||||
T Consensus 91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV 170 (576)
T KOG0585|consen 91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV 170 (576)
T ss_pred ccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe
Confidence 33445578999999999999999999865 599999999964321 0112357899999999999999
Q ss_pred cceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCC-CCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 009404 285 VPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG-MNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNIL 363 (535)
Q Consensus 285 v~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NIL 363 (535)
|+|+.+..+.. ...+|||+|||..|.+...=. .+. +++.++.+++.++..||+|||.++ |+||||||+|+|
T Consensus 171 V~LiEvLDDP~--s~~~YlVley~s~G~v~w~p~---d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLL 242 (576)
T KOG0585|consen 171 VKLIEVLDDPE--SDKLYLVLEYCSKGEVKWCPP---DKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLL 242 (576)
T ss_pred eEEEEeecCcc--cCceEEEEEeccCCccccCCC---CcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheE
Confidence 99999987755 447899999999888765422 233 899999999999999999999999 999999999999
Q ss_pred eCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCC----CCccchHHHHHHHHHHHHhCCCCCCCc
Q 009404 364 LDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR----ASLMSDVFSFGVVLLELITGRQPIHRS 439 (535)
Q Consensus 364 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDVwSlGvil~eLltG~~P~~~~ 439 (535)
|+++++|||+|||.+...................||+.|+|||....+. .+.+.||||+||+||.|+.|+.||...
T Consensus 243 l~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~ 322 (576)
T KOG0585|consen 243 LSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD 322 (576)
T ss_pred EcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc
Confidence 9999999999999998775443222233344578999999999887633 367889999999999999999999643
Q ss_pred cccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCC
Q 009404 440 ITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAP 512 (535)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~ 512 (535)
... ....++....+.....+++...+.+|++++|.+||++|.+..+|..+.+.-..
T Consensus 323 ~~~-----------------~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 323 FEL-----------------ELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred hHH-----------------HHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 221 11233444444333334567789999999999999999999999998876544
No 44
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.2e-40 Score=333.23 Aligned_cols=261 Identities=26% Similarity=0.403 Sum_probs=205.2
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-Cc----EEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~----~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
.+|+..+.||+|+||.||+|++.+ ++ .||+|+++..........+.+|+.+++.++||||++++|++...
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~----- 81 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 81 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-----
Confidence 458888999999999999998643 33 48999997654445556788999999999999999999998752
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..++++||+++|+|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 82 ~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~ 157 (316)
T cd05108 82 TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAK 157 (316)
T ss_pred CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccc
Confidence 3479999999999999997642 45889999999999999999999998 9999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDS 458 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
........ .......++..|+|||++....++.++||||||+++|||++ |+.||....... .....
T Consensus 158 ~~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---~~~~~------- 224 (316)
T cd05108 158 LLGADEKE---YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSIL------- 224 (316)
T ss_pred cccCCCcc---eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHH-------
Confidence 76543211 01112234678999999999999999999999999999998 999986432111 00000
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcc
Q 009404 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515 (535)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~ 515 (535)
.... ....+..+...+.+++.+||..+|++||++.+++..|..+..+..
T Consensus 225 ----~~~~----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~ 273 (316)
T cd05108 225 ----EKGE----RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 273 (316)
T ss_pred ----hCCC----CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence 0000 001112223457889999999999999999999999999987664
No 45
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.7e-40 Score=337.57 Aligned_cols=265 Identities=28% Similarity=0.422 Sum_probs=205.8
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEc------CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeec
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEF 294 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~ 294 (535)
...++|.+.+.||+|+||.||+|... .++.||+|+++..........+..|++++.++ +|+||+++++++...
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 34567888999999999999999642 24789999997654334445578899999999 899999999988643
Q ss_pred ccCcceEEEEEecCCCCCHHHhhhhcc-----------------------------------------------------
Q 009404 295 RGKRAMRLLVFEFMPNGNLRDCLDGVL----------------------------------------------------- 321 (535)
Q Consensus 295 ~~~~~~~~lV~e~~~~gsL~~~l~~~~----------------------------------------------------- 321 (535)
....+++|||+++++|.+++....
T Consensus 84 ---~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
T cd05054 84 ---GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE 160 (337)
T ss_pred ---CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence 346789999999999999985421
Q ss_pred ------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCc
Q 009404 322 ------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395 (535)
Q Consensus 322 ------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~ 395 (535)
...+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.++|+|||++..+...... .....
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~---~~~~~ 234 (337)
T cd05054 161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY---VRKGD 234 (337)
T ss_pred hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcch---hhccC
Confidence 125899999999999999999999998 999999999999999999999999999876432211 11223
Q ss_pred cccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccccCCCCCCCCCC
Q 009404 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDF 474 (535)
Q Consensus 396 ~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 474 (535)
..++..|+|||++.+..++.++|||||||++|||++ |..||........ ... .+..... ...
T Consensus 235 ~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~--~~~-----------~~~~~~~----~~~ 297 (337)
T cd05054 235 ARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE--FCR-----------RLKEGTR----MRA 297 (337)
T ss_pred CCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH--HHH-----------HHhccCC----CCC
Confidence 345678999999999999999999999999999998 9999864322110 000 0000000 011
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCC
Q 009404 475 PKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAP 512 (535)
Q Consensus 475 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~ 512 (535)
+......+.+++.+||+.+|++||++.|++++|.++.+
T Consensus 298 ~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 298 PEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 22334558899999999999999999999999998765
No 46
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-41 Score=331.84 Aligned_cols=249 Identities=24% Similarity=0.390 Sum_probs=211.0
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
.|+..+.||+|.||.||+|.+. .++.||+|++.-.......++..+|+.+|..++++||.+++|.+.. +..++++
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~----g~~Lwii 89 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLK----GTKLWII 89 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheee----cccHHHH
Confidence 4666688999999999999875 4899999999988777777789999999999999999999999887 5677999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+.+|++.+.|+.. ..+++..+..|++++..||.|||.++ .+|||||+.||||.+++.|||+|||++..+...
T Consensus 90 Mey~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HHHhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeech
Confidence 9999999999999753 33588888999999999999999998 999999999999999999999999999887665
Q ss_pred CCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (535)
. .....++||+.|||||++....|+.|+||||||++.+||.+|.+|+....+... . -.+.+
T Consensus 165 ~-----~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv----l----------flIpk 225 (467)
T KOG0201|consen 165 V-----KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV----L----------FLIPK 225 (467)
T ss_pred h-----hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE----E----------EeccC
Confidence 3 234778999999999999988999999999999999999999999864433100 0 11233
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 465 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
-..|.+.+. .+..+.+++..||+.||+.||++.+++++
T Consensus 226 ~~PP~L~~~----~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 226 SAPPRLDGD----FSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred CCCCccccc----cCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 344555543 44558999999999999999999999963
No 47
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3e-40 Score=330.43 Aligned_cols=248 Identities=24% Similarity=0.306 Sum_probs=200.2
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||.||++... +++.||+|++..... ......+.+|+++++.++||||+++++++.+ ....
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~~ 76 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD----QRFL 76 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc----CCeE
Confidence 36788899999999999999976 589999999864321 2233458899999999999999999988765 4577
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ..+++.....++.|++.||+|||+++ |+||||||+|||+++++.+||+|||++...
T Consensus 77 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~ 151 (291)
T cd05612 77 YMLMEYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKL 151 (291)
T ss_pred EEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhc
Confidence 9999999999999999754 45899999999999999999999998 999999999999999999999999999765
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...........
T Consensus 152 ~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~-------------- 209 (291)
T cd05612 152 RDR--------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEK-------------- 209 (291)
T ss_pred cCC--------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--------------
Confidence 432 1234689999999999988899999999999999999999999964322110000
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHh
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT-----MSEVVQILS 508 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~~L~ 508 (535)
+... ...++......+.+++.+||+.||.+||+ +.|++++-+
T Consensus 210 ---i~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~ 256 (291)
T cd05612 210 ---ILAG--KLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRW 256 (291)
T ss_pred ---HHhC--CcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcc
Confidence 0000 00122233455889999999999999995 999887643
No 48
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-40 Score=348.00 Aligned_cols=275 Identities=22% Similarity=0.274 Sum_probs=216.3
Q ss_pred HhcCCCCCcccceeCceEEEEEEEcCC-cEEEEEEeccCCCCChhHHHHHHHHHHhccC-CCCccceee-eeeec-ccC-
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLTDG-RIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HCHVVPLVG-YCSEF-RGK- 297 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g-~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g-~~~~~-~~~- 297 (535)
...++++.+.|.+|||+.||.|++..+ ..+|+|++... .........+|+++|+.|+ |+|||.+++ ..... .+.
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 344566789999999999999998776 99999999876 4555667899999999995 999999999 33322 222
Q ss_pred cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCC
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGl 377 (535)
..+.+|+||||++|+|-++++.+...+|++.++++|+.++++|+++||... |+|||||||.+||||+.+++.||+|||.
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCcccc
Confidence 467899999999999999998877777999999999999999999999985 6799999999999999999999999999
Q ss_pred ccccccCCCCCCC----CCCCccccCccccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhh
Q 009404 378 AKRLKADGLPSCS----SSPARMQGTFGYFAPEYAM---VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450 (535)
Q Consensus 378 a~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~ 450 (535)
+............ .......-|+.|.|||.+. +..+++|+|||+|||+||-|+....||+....
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--------- 263 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--------- 263 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc---------
Confidence 8644321100000 0001123588999999874 67789999999999999999999999964311
Q ss_pred ccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcccccCC
Q 009404 451 ATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRNI 520 (535)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~~~~~~ 520 (535)
..|....+...-....+..|.+||+.||+.||++||++.||++.+-+++...-...++
T Consensus 264 ------------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~~ 321 (738)
T KOG1989|consen 264 ------------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPDI 321 (738)
T ss_pred ------------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCcccc
Confidence 1122222222222456788999999999999999999999999999998765443333
No 49
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=7e-40 Score=321.87 Aligned_cols=256 Identities=23% Similarity=0.360 Sum_probs=204.9
Q ss_pred hcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
.++|+..++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++.+ ....++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~l 78 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT--MSVQAFLEEANLMKTLQHDKLVRLYAVVTK----EEPIYI 78 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc--hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC----CCCcEE
Confidence 45678889999999999999998888899999987532 234568999999999999999999988765 345699
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
+|||+++++|.+++.......+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||++.....
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 79 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred EEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCC
Confidence 999999999999997655566899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
.... ......++..|+|||++....++.++||||||+++|+|++ |..||....... .....
T Consensus 156 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~~----------- 217 (261)
T cd05072 156 NEYT----AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD---VMSAL----------- 217 (261)
T ss_pred Ccee----ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH---HHHHH-----------
Confidence 3211 1122345678999999988889999999999999999998 899985432211 11000
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
........ +...+..+.+++.+||..+|++||+++++.+.|+++
T Consensus 218 ~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 218 QRGYRMPR----MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HcCCCCCC----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 00001111 112334588899999999999999999999999864
No 50
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=5.9e-40 Score=322.24 Aligned_cols=258 Identities=28% Similarity=0.410 Sum_probs=208.6
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
.+..+|+..+.||.|+||.||+|...+++.+++|.+..... .....+..|+.+++.++|+||+++++++.+ ....
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~ 77 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL-LKQQDFQKEVQALKRLRHKHLISLFAVCSV----GEPV 77 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch-hhHHHHHHHHHHHhcCCCcchhheeeeEec----CCCe
Confidence 44567888899999999999999998899999999876542 234458899999999999999999999876 4467
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++++|.+++.......+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++...
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~ 154 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLI 154 (261)
T ss_pred EEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhc
Confidence 99999999999999998765567899999999999999999999998 999999999999999999999999999776
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
..... ......++..|+|||.+....++.++||||||+++|+|++ |+.||....... .....
T Consensus 155 ~~~~~-----~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~---~~~~~--------- 217 (261)
T cd05148 155 KEDVY-----LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE---VYDQI--------- 217 (261)
T ss_pred CCccc-----cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHHH---------
Confidence 43321 1123345678999999988899999999999999999998 888985433111 11000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
. .......+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 218 --~----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 218 --T----AGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred --H----hCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0 0011122333445688999999999999999999999999864
No 51
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.1e-39 Score=321.08 Aligned_cols=255 Identities=27% Similarity=0.411 Sum_probs=203.3
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
.+|+..+.||+|+||.||+|.+.+ ++.||+|.+.... .....+.+|+++++.++|+||+++++++.. ....++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~l 79 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR----EPPFYI 79 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc--hHHHHHHHHHHHHHhCCCCChhheEEEEcC----CCCcEE
Confidence 456777899999999999998754 8899999987542 234568899999999999999999999876 345699
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
+|||+++++|.+++.......+++..+..++.|+++||+|||+.+ ++||||||+|||+++++.+||+|||++.....
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 80 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred EEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence 999999999999997655556899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
.... ......++..|+|||.+.+..++.++||||||+++|||++ |..||...... ..... +
T Consensus 157 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~---~~~~~-----------~ 218 (263)
T cd05052 157 DTYT----AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYEL-----------L 218 (263)
T ss_pred ceee----ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHH-----------H
Confidence 3211 1112234568999999998999999999999999999998 88888543211 10000 0
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
... .....+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 219 ~~~----~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 219 EKG----YRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HCC----CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 000 11122233345688999999999999999999999999875
No 52
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.3e-39 Score=320.15 Aligned_cols=257 Identities=26% Similarity=0.404 Sum_probs=205.3
Q ss_pred HhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
..++|+..+.||+|++|.||+|.+.+++.||+|.++... .....+.+|+.++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~ 77 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT--MDPKDFLAEAQIMKKLRHPKLIQLYAVCTL----EEPIY 77 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc--ccHHHHHHHHHHHHHCCCCCccceeEEEec----CCCee
Confidence 456688889999999999999998778899999987543 234558899999999999999999998875 34579
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++....
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 154 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIK 154 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEcc
Confidence 9999999999999997655456899999999999999999999998 9999999999999999999999999998775
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
..... .......+..|+|||++....++.++||||||+++|||++ |+.||....... .....
T Consensus 155 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~---------- 217 (261)
T cd05068 155 EDIYE----AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE---VLQQV---------- 217 (261)
T ss_pred CCccc----ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHH----------
Confidence 32211 1111223467999999998899999999999999999999 898985432111 00000
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
... .....+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 218 -~~~----~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 218 -DQG----YRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred -HcC----CCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 000 00111223345689999999999999999999999999864
No 53
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.4e-40 Score=312.66 Aligned_cols=270 Identities=24% Similarity=0.304 Sum_probs=208.6
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChh-HHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNAD-SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~-~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
++|+.++.|++|.||.||+|+++ +++.||+|+++.....+.. ...++||.+|.+++|||||.+..+..-..- ...|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~--d~iy 153 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM--DKIY 153 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc--ceee
Confidence 45666889999999999999975 5899999999876533332 236899999999999999999998875443 3579
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||++. +|...++... +++...+..-+..|+++|++|||.+. |+|||||++|+|++..|.+||+|||+|+.+.
T Consensus 154 ~VMe~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eeHHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhc
Confidence 99999965 9999998764 67999999999999999999999999 9999999999999999999999999999887
Q ss_pred cCCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchh----------hhhc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESL----------VLWA 451 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~----------~~~~ 451 (535)
.. ....+..+.|.+|.|||.+.+. .|+...|+||+|||+.||+++++.|........... ..|.
T Consensus 229 sp-----~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwp 303 (419)
T KOG0663|consen 229 SP-----LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWP 303 (419)
T ss_pred CC-----cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCC
Confidence 54 2345667889999999998864 589999999999999999999988865433221111 1111
Q ss_pred cccccCcc--cccccCCCCCCCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 452 TPRLQDSG--TVISELPDPRLKGDFPKE-EMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 452 ~~~~~~~~--~~~~~~~~~~l~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
........ ....+-+...++..|+.. .++.-++|+..+|..||.+|.|+.|.+++
T Consensus 304 g~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 304 GYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred CccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 11110000 001111122223333333 44667889999999999999999999974
No 54
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.2e-39 Score=324.83 Aligned_cols=269 Identities=23% Similarity=0.294 Sum_probs=199.9
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
++|+..+.||+|+||.||+++.+ +++.||||++..... ......+.+|+++++.++||||+++++++.. ....+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~ 76 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR----RGKLY 76 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec----CCEEE
Confidence 36888899999999999999986 488999999975432 2233457899999999999999999998875 45679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||++++.|..+.+. ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 77 lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 151 (287)
T cd07848 77 LVFEYVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLS 151 (287)
T ss_pred EEEecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCccccc
Confidence 99999998777655432 245899999999999999999999998 9999999999999999999999999998764
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccC-----
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD----- 457 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~----- 457 (535)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..................+..
T Consensus 152 ~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07848 152 EGSN----ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKL 227 (287)
T ss_pred cccc----ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHh
Confidence 3221 1223456899999999999888999999999999999999999999653321110000000000000
Q ss_pred --cccccccCCCCCC------CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 458 --SGTVISELPDPRL------KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 458 --~~~~~~~~~~~~l------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..........+.. ........+..+.+|+.+||+.||++|||++|++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 228 FYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000100 001112245568999999999999999999999863
No 55
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.3e-39 Score=325.20 Aligned_cols=268 Identities=22% Similarity=0.334 Sum_probs=198.5
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
++|...+.||+|+||.||+|+.. +++.||+|+++..........+.+|+.+++.++||||+++++++.. ....++
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~l 80 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHT----ERCLTL 80 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcC----CCeEEE
Confidence 45788899999999999999875 5889999999765444444457899999999999999999998865 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||++ ++|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++....
T Consensus 81 v~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~ 155 (288)
T cd07871 81 VFEYLD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSV 155 (288)
T ss_pred EEeCCC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccC
Confidence 999997 5999988653 244789999999999999999999998 99999999999999999999999999976543
Q ss_pred CCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcc-ccccCc---
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWAT-PRLQDS--- 458 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~-~~~~~~--- 458 (535)
.. .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||................ ....+.
T Consensus 156 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07871 156 PT-----KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPG 230 (288)
T ss_pred CC-----ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhc
Confidence 21 12233467899999998865 568999999999999999999999996543221111110000 000000
Q ss_pred ---ccccccCCCCCCCCC----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 459 ---GTVISELPDPRLKGD----FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 459 ---~~~~~~~~~~~l~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.........+..... ........+.+|+.+||+.||.+|||+.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 231 ITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred cccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000111111000 011223457899999999999999999999863
No 56
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1e-38 Score=369.47 Aligned_cols=265 Identities=26% Similarity=0.497 Sum_probs=206.4
Q ss_pred hcCCCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
...|...++||+|+||.||+|+. .++..||||++...... ..+|++.+++++||||++++|++.+ ....+
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~l~~l~HpnIv~~~~~~~~----~~~~~ 759 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-----PSSEIADMGKLQHPNIVKLIGLCRS----EKGAY 759 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-----cHHHHHHHhhCCCCCcceEEEEEEc----CCCCE
Confidence 34577788999999999999997 46899999998753321 2356889999999999999999976 34569
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||+++|+|.++++. ++|..+..|+.|+|+||+|||....++|+||||||+||+++.++.+++. ||......
T Consensus 760 lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~ 833 (968)
T PLN00113 760 LIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC 833 (968)
T ss_pred EEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc
Confidence 99999999999999953 7999999999999999999997655569999999999999999888875 66554322
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
.+ ....+|+.|+|||++....++.++|||||||++|||+||+.||+..... ......|....... ...
T Consensus 834 ~~---------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~--~~~ 901 (968)
T PLN00113 834 TD---------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGV-HGSIVEWARYCYSD--CHL 901 (968)
T ss_pred cC---------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCC-CCcHHHHHHHhcCc--cch
Confidence 11 1235789999999999999999999999999999999999998543221 22333333222211 112
Q ss_pred ccCCCCCCCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcc
Q 009404 463 SELPDPRLKG--DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515 (535)
Q Consensus 463 ~~~~~~~l~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~ 515 (535)
....++.+.. ..+.+....+.+++.+||+.||++||||.|+++.|+++.+..+
T Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~ 956 (968)
T PLN00113 902 DMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSS 956 (968)
T ss_pred hheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcccc
Confidence 2334444432 2345566778899999999999999999999999999977544
No 57
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.4e-39 Score=322.98 Aligned_cols=257 Identities=26% Similarity=0.405 Sum_probs=203.7
Q ss_pred cCCCCCcccceeCceEEEEEEEcC------CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKR 298 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 298 (535)
++|...+.||+|+||.||+|+..+ ++.||||.++.....+....+.+|+++++.++|+||+++++++.. .
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~ 80 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE----G 80 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec----C
Confidence 457778899999999999998643 478999999876554455679999999999999999999999876 3
Q ss_pred ceEEEEEecCCCCCHHHhhhhcc------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVL------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE 366 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~ 366 (535)
...++||||+++++|.++++... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~ 157 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGY 157 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcC
Confidence 46799999999999999997532 234789999999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccc
Q 009404 367 NLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEE 445 (535)
Q Consensus 367 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~ 445 (535)
++.++|+|||++......... .......+++.|+|||++....++.++||||||+++|||++ |..||.......
T Consensus 158 ~~~~kl~d~g~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~-- 232 (280)
T cd05049 158 DLVVKIGDFGMSRDVYTTDYY---RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE-- 232 (280)
T ss_pred CCeEEECCcccceecccCcce---ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--
Confidence 999999999999765433211 11223345788999999999999999999999999999998 999986433211
Q ss_pred hhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
..... ..... ...+...+..+.+++.+||+.||++|||+.||++.|++
T Consensus 233 -~~~~~-----------~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 233 -VIECI-----------TQGRL----LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred -HHHHH-----------HcCCc----CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 11100 00000 01122234558999999999999999999999999863
No 58
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.2e-39 Score=319.42 Aligned_cols=258 Identities=26% Similarity=0.415 Sum_probs=204.9
Q ss_pred cCCCCCcccceeCceEEEEEEEcC----CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD----GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~----g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
++|+..+.||+|+||.||+|.+.. ...||||.++..........|.+|+.+++.++||||+++++++.+ ...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~ 79 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK----SRP 79 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEec----CCc
Confidence 568888999999999999998753 458999998766555555678999999999999999999998865 445
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++||||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ |+|+||||+|||+++++.++|+|||++..
T Consensus 80 ~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~ 155 (266)
T cd05033 80 VMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRR 155 (266)
T ss_pred eEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhc
Confidence 799999999999999997643 36899999999999999999999998 99999999999999999999999999987
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
....... .......++..|+|||.+....++.++||||||+++|||++ |..||....... .....
T Consensus 156 ~~~~~~~---~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~-------- 221 (266)
T cd05033 156 LEDSEAT---YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD---VIKAV-------- 221 (266)
T ss_pred ccccccc---eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH---HHHHH--------
Confidence 7521110 11112335678999999998899999999999999999998 999985432211 00000
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
... .....+...+..+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 222 ---~~~----~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~ 266 (266)
T cd05033 222 ---EDG----YRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI 266 (266)
T ss_pred ---HcC----CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 000 000112233455889999999999999999999999998763
No 59
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=303.59 Aligned_cols=270 Identities=26% Similarity=0.360 Sum_probs=211.1
Q ss_pred cCCCCCcccceeCceEEEEEE-EcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeeccc-CcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG-KRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~-~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~-~~~~~~ 302 (535)
++|.+.+.||+|||+-||+++ ..++..+|+|++.... .+..+..++|++.-++++|||+++++++...... .....|
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 567778999999999999998 4568899999998765 4555668999999999999999999998865443 455689
Q ss_pred EEEecCCCCCHHHhhhhcccC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVE--GMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
|+++|+..|+|.+.++....+ .+++.+.+.|+.++++||++||+.. |+++||||||.|||+.+.+.++|.|||.+..
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCccc
Confidence 999999999999999765443 4999999999999999999999986 5699999999999999999999999999876
Q ss_pred cccCCCCC----CCCCCCccccCccccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccc
Q 009404 381 LKADGLPS----CSSSPARMQGTFGYFAPEYAM---VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453 (535)
Q Consensus 381 ~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~ 453 (535)
..-..... ....+.....|..|.|||.+. +...++++|||||||+||+|+.|..||+.....+. ++.
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg-Sla----- 252 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG-SLA----- 252 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC-eEE-----
Confidence 54321100 001112234678899999886 34578999999999999999999999975433222 111
Q ss_pred cccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 454 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
..+....+........+..+.++++.|++.||.+||++.+++..++.+.
T Consensus 253 ---------LAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 253 ---------LAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ---------EeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1111212211112224566999999999999999999999999998764
No 60
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6.8e-40 Score=332.82 Aligned_cols=243 Identities=24% Similarity=0.295 Sum_probs=195.3
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEec
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
+.||+|+||.||+++.. +|+.||+|+++... .......+.+|+++++.++||||+++++++.. ....++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~----~~~~~lv~e~ 76 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT----HDRLCFVMEY 76 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc----CCEEEEEEeC
Confidence 36999999999999875 58999999997532 12233457889999999999999999998876 4467999999
Q ss_pred CCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCC
Q 009404 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP 387 (535)
Q Consensus 308 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~ 387 (535)
+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 77 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~--- 148 (323)
T cd05571 77 ANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISD--- 148 (323)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccC---
Confidence 9999999998753 46899999999999999999999998 999999999999999999999999998754322
Q ss_pred CCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCC
Q 009404 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD 467 (535)
Q Consensus 388 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (535)
........||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .... +..
T Consensus 149 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~---~~~~--------------~~~ 209 (323)
T cd05571 149 --GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFEL--------------ILM 209 (323)
T ss_pred --CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH---HHHH--------------HHc
Confidence 122334579999999999999999999999999999999999999996432211 0000 000
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 009404 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQI 506 (535)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 506 (535)
. ...+|...+..+.+++.+||+.||++|| ++.+++++
T Consensus 210 ~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 210 E--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred C--CCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 0 0122333445688999999999999999 89999864
No 61
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3e-39 Score=321.53 Aligned_cols=271 Identities=28% Similarity=0.383 Sum_probs=205.1
Q ss_pred CCCcccceeCceEEEEEEE-----cCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 228 SGSNIVGQGGSSYVYRGQL-----TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 228 ~~~~~LG~G~fG~Vy~~~~-----~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
...+.||+|+||+||++.. .+++.||+|.++..........|.+|+++++.++||||+++++++.... ....+
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~~ 84 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQG--GKGLQ 84 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--CceEE
Confidence 7778999999999988653 3578899999986544344566889999999999999999999886533 33578
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||+++++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.++|+|||++....
T Consensus 85 lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 85 LIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccC
Confidence 99999999999999965 35899999999999999999999998 9999999999999999999999999998765
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
..... ........++..|+|||.+....++.++||||||+++|||++|..|+.......... ......... ...+
T Consensus 159 ~~~~~--~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~-~~~~~~~~~--~~~~ 233 (283)
T cd05080 159 EGHEY--YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEM-IGPKQGQMT--VVRL 233 (283)
T ss_pred Ccchh--hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhh-hcccccccc--hhhh
Confidence 42211 011122335667999999988889999999999999999999999986433221100 000000000 0001
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
.+..+.......+...+..+.+++..||+.+|++|||+.++++.|+.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 234 IELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1111111122233444566999999999999999999999999999874
No 62
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.1e-39 Score=323.51 Aligned_cols=260 Identities=26% Similarity=0.408 Sum_probs=201.8
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEc------CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecc
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFR 295 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~ 295 (535)
..+++|+..+.||+|+||.||+|.+. .+..||||++...........+.+|+.+++.++||||+++++++.+
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-- 80 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-- 80 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC--
Confidence 45678999999999999999999763 2567999998654433344568899999999999999999999865
Q ss_pred cCcceEEEEEecCCCCCHHHhhhhccc--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 009404 296 GKRAMRLLVFEFMPNGNLRDCLDGVLV--------EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN 367 (535)
Q Consensus 296 ~~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~ 367 (535)
....++||||+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++++
T Consensus 81 --~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 81 --GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 155 (277)
T ss_pred --CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCC
Confidence 4467999999999999999865321 23678899999999999999999988 9999999999999999
Q ss_pred CcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccch
Q 009404 368 LNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEES 446 (535)
Q Consensus 368 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~ 446 (535)
+.++|+|||++.......... ......++..|+|||++....++.++||||||+++|||++ |..||...... .
T Consensus 156 ~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~---~ 229 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDYYR---KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE---Q 229 (277)
T ss_pred CCEEECCCCCccccCCcceee---cCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---H
Confidence 999999999987654332211 1112245678999999998899999999999999999999 67888543221 1
Q ss_pred hhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 447 LVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
..... .+...+ ..+...+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 230 ~~~~~-----------~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 230 VLRFV-----------MEGGLL----DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHH-----------HcCCcC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 10000 000000 1122334568999999999999999999999998863
No 63
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-40 Score=337.85 Aligned_cols=251 Identities=25% Similarity=0.332 Sum_probs=208.6
Q ss_pred CCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
|...+.||.|+.|.|-+|++. +|+.+|||++..... ......+.+|+-+|+.+.|||++++++++.+ ..++|+
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~----~~~lyl 89 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN----KQHLYL 89 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc----CceEEE
Confidence 455688999999999999875 599999999976521 1112337899999999999999999999876 668899
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
|.||+++|-|+++|-.. .++++.++.+++.||+.|+.|.|..+ |+||||||+|+|||..+++||+|||||.....
T Consensus 90 vlEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred EEEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 99999999999999764 66999999999999999999999998 99999999999999999999999999987665
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRA-SLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
+. ...+.+|.+.|.+||++.+.+| ..++||||.|||||.||||+.||+...-+ .+...
T Consensus 165 gk------lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir---~LLlK------------ 223 (786)
T KOG0588|consen 165 GK------LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR---VLLLK------------ 223 (786)
T ss_pred Cc------cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH---HHHHH------------
Confidence 43 4566789999999999999988 68999999999999999999999733211 11111
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
+.... -+.|..++....+|+.+|+..||.+|.|++||+++-.-..
T Consensus 224 --V~~G~--f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 224 --VQRGV--FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSG 268 (786)
T ss_pred --HHcCc--ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence 11111 1345566677899999999999999999999999765443
No 64
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-40 Score=302.61 Aligned_cols=253 Identities=24% Similarity=0.337 Sum_probs=212.8
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|++.+.||+|.||.||.|+.+ ++-.||+|++.... .......+.+|+++-+.|+||||+++++++.+ ....
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd----~~ri 97 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD----SKRI 97 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec----ccee
Confidence 56888999999999999999875 47899999997553 12333458899999999999999999999998 5567
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
||++||.++|.|...|+......+++.....+..|+|.||.|+|..+ ++||||||+|+|++.++..||+|||-+..-
T Consensus 98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 174 (281)
T ss_pred EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeec
Confidence 99999999999999999777778999999999999999999999998 999999999999999999999999998765
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
+. .......||..|+|||...+...+...|+|++|++.||++.|.+||........
T Consensus 175 p~-------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~et----------------- 230 (281)
T KOG0580|consen 175 PS-------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSET----------------- 230 (281)
T ss_pred CC-------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHH-----------------
Confidence 42 345668899999999999999999999999999999999999999975442211
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
+.++..-+ -.+|...+....+++.+|+..+|.+|.+..|+++.-+-.
T Consensus 231 YkrI~k~~--~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~ 277 (281)
T KOG0580|consen 231 YKRIRKVD--LKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIV 277 (281)
T ss_pred HHHHHHcc--ccCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHH
Confidence 11111111 123445556689999999999999999999999876643
No 65
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.5e-39 Score=320.58 Aligned_cols=260 Identities=25% Similarity=0.405 Sum_probs=201.0
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCc----EEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~----~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
++|...+.||+|+||+||+|.+. +++ .+++|.+...........+..|+..++.+.||||+++++++.. .
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-----~ 81 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-----A 81 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-----C
Confidence 35677889999999999999874 344 4788887654333344557788889999999999999998753 2
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..++++||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++
T Consensus 82 ~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~ 157 (279)
T cd05111 82 SLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVAD 157 (279)
T ss_pred ccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccce
Confidence 4578999999999999997532 45899999999999999999999998 9999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDS 458 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
........ .......++..|+|||.+..+.++.++||||||+++|||++ |..||............ ..
T Consensus 158 ~~~~~~~~---~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~--------~~ 226 (279)
T cd05111 158 LLYPDDKK---YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL--------EK 226 (279)
T ss_pred eccCCCcc---cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH--------HC
Confidence 76433211 11223456788999999998899999999999999999998 99998643221100000 00
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCc
Q 009404 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514 (535)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~ 514 (535)
+ ..... +..+...+.+++.+||..||++|||+.|+++.|..+..+.
T Consensus 227 ~---~~~~~-------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 227 G---ERLAQ-------PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred C---CcCCC-------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 0 00111 1112234788999999999999999999999999987654
No 66
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.5e-39 Score=317.14 Aligned_cols=252 Identities=25% Similarity=0.385 Sum_probs=199.4
Q ss_pred cCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
++|+..+.||+|+||.||++.++++..+|+|.+.... .....+..|+++++.++||||+++++++.+ ....++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~iv 77 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA--MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQ----QKPLYIV 77 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC--ccHHHHHHHHHHHHHCCCCCceeEEEEEcc----CCCEEEE
Confidence 3467778899999999999999888899999986442 233468899999999999999999999876 3467999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+++|+|.++++... ..+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||.+......
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05114 78 TEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDD 153 (256)
T ss_pred EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCC
Confidence 99999999999987543 35899999999999999999999998 999999999999999999999999998765432
Q ss_pred CCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
... ......++..|+|||.+....++.++||||||+++|||++ |+.||....... ...... .
T Consensus 154 ~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~---~~~~i~----~------ 216 (256)
T cd05114 154 EYT----SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE---VVEMIS----R------ 216 (256)
T ss_pred cee----ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHH----C------
Confidence 211 1122235668999999988889999999999999999999 888985432211 111000 0
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.... ..+...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 217 -~~~~----~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 217 -GFRL----YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred -CCCC----CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0000 011122345899999999999999999999999873
No 67
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=7.4e-40 Score=333.37 Aligned_cols=246 Identities=25% Similarity=0.307 Sum_probs=198.8
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||.||+|++. +++.||||.+.... .......+.+|+.+++.++||||+++++++.+ ....
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~~ 93 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD----ENRV 93 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc----CCEE
Confidence 46777899999999999999986 48999999997532 12233458899999999999999999999876 4567
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||++...
T Consensus 94 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 168 (329)
T PTZ00263 94 YFLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKV 168 (329)
T ss_pred EEEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEc
Confidence 9999999999999999754 45889999999999999999999998 999999999999999999999999999865
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||..........
T Consensus 169 ~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~--------------- 225 (329)
T PTZ00263 169 PDR--------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYE--------------- 225 (329)
T ss_pred CCC--------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHH---------------
Confidence 432 123468999999999999999999999999999999999999996432210000
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT-----MSEVVQI 506 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~~ 506 (535)
.+.... ..+|...+..+.+|+.+||+.||.+||+ +.+++.+
T Consensus 226 --~i~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 226 --KILAGR--LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred --HHhcCC--cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 000000 0112223345889999999999999987 7888765
No 68
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4e-40 Score=330.91 Aligned_cols=248 Identities=25% Similarity=0.371 Sum_probs=207.7
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCC-hhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPN-ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
++|.+.+.||+|.||.||||+-+ +.+.||+|.+.+....+ ....+.+|+++++.++||||+.+++.|.. ..+.+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt----~~~~~ 77 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFET----SAHLW 77 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcc----cceEE
Confidence 46777889999999999999865 48899999997654333 34558899999999999999999998876 56789
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+|.||+.+ +|..+|... ..+++..+..|+.+++.||.|||+.+ |+|||+||+|||++.++.+|++|||+|+...
T Consensus 78 vVte~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~ 151 (808)
T KOG0597|consen 78 VVTEYAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMS 151 (808)
T ss_pred EEehhhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcc
Confidence 99999966 999999764 66999999999999999999999998 9999999999999999999999999999876
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
.. ....+...||+-|||||.+.+++|+..+|+||+|||+||+.+|++||....- ... +
T Consensus 152 ~~-----t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si------~~L-----------v 209 (808)
T KOG0597|consen 152 TN-----TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI------TQL-----------V 209 (808)
T ss_pred cC-----ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH------HHH-----------H
Confidence 54 2345667899999999999999999999999999999999999999963211 110 1
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..+.... ...|...+..+..++...|.+||.+|.|-.+++.+
T Consensus 210 ~~I~~d~--v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 210 KSILKDP--VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHHhcCC--CCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 1111111 12355667779999999999999999999999863
No 69
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.6e-39 Score=322.95 Aligned_cols=262 Identities=27% Similarity=0.415 Sum_probs=203.1
Q ss_pred HHHhcCCCCCcccceeCceEEEEEEEcC------CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeec
Q 009404 221 EHATDKFSGSNIVGQGGSSYVYRGQLTD------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEF 294 (535)
Q Consensus 221 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~~------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~ 294 (535)
+..+++|++.+.||+|+||.||+|..++ +..||+|.+...........+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~- 80 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSK- 80 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC-
Confidence 4556789999999999999999997542 458999998755433344558899999999999999999999865
Q ss_pred ccCcceEEEEEecCCCCCHHHhhhhccc--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 009404 295 RGKRAMRLLVFEFMPNGNLRDCLDGVLV--------EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE 366 (535)
Q Consensus 295 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~ 366 (535)
....++||||+++|+|.+++..... ..+++..+..++.|++.||.|||+++ |+||||||+|||+++
T Consensus 81 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~ 154 (288)
T cd05061 81 ---GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAH 154 (288)
T ss_pred ---CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcC
Confidence 3356999999999999999965321 23567788999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccc
Q 009404 367 NLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEE 445 (535)
Q Consensus 367 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~ 445 (535)
++.++|+|||+++........ .......++..|+|||.+..+.++.++||||||+++|||++ |..||.......
T Consensus 155 ~~~~~L~Dfg~~~~~~~~~~~---~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~-- 229 (288)
T cd05061 155 DFTVKIGDFGMTRDIYETDYY---RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ-- 229 (288)
T ss_pred CCcEEECcCCccccccccccc---cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH--
Confidence 999999999998865433221 11122335678999999998899999999999999999999 678885432211
Q ss_pred hhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
.... +.... ....+...+..+.+++.+||+.||++|||+.++++.|.+.
T Consensus 230 -~~~~--------------~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 230 -VLKF--------------VMDGG-YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred -HHHH--------------HHcCC-CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1000 00000 0011222345689999999999999999999999999876
No 70
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.1e-39 Score=327.73 Aligned_cols=201 Identities=27% Similarity=0.419 Sum_probs=173.7
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
.++|+..+.||+|+||.||++.+. ++..+|+|.+...........+.+|+++++.++||||+++++++.+ ....+
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~ 79 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS----DGEIS 79 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE----CCEEE
Confidence 467889999999999999999986 4888999998765433444568999999999999999999999986 44779
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||+++|+|.+++... ..+++.....++.|++.||.|||+.+ .|+|+||||+|||+++++.+||+|||++....
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 80 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (333)
T ss_pred EEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence 999999999999999753 45889999999999999999999753 39999999999999999999999999987653
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRS 439 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~ 439 (535)
.. ......|+..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 156 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 156 DS-------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred hh-------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 32 122346889999999999888999999999999999999999999643
No 71
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.1e-40 Score=319.04 Aligned_cols=251 Identities=22% Similarity=0.339 Sum_probs=208.9
Q ss_pred cCCCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCCCCChh--HHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNAD--SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~~~~~~--~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
.+|++.+.||+|.||.|-+|.. ..|+.||||.++.+...... -.+.+|+++|+.|+||||+.++.+|.. ....
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFEN----kdKI 128 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFEN----KDKI 128 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcC----CceE
Confidence 4566778899999999999986 56999999999876543332 347899999999999999999999875 4567
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
.|||||..+|.|++|+... ..+++.++..+++||..|+.|.|.++ ++|||||.+|||||.|+++||+|||++..+
T Consensus 129 vivMEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly 203 (668)
T KOG0611|consen 129 VIVMEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLY 203 (668)
T ss_pred EEEEEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhh
Confidence 9999999999999999765 56999999999999999999999998 999999999999999999999999999877
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRA-SLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
..+ ...+.++|++-|.+||.+.+.+| .+.+|-|||||+||.|+.|..||+......
T Consensus 204 ~~~------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~----------------- 260 (668)
T KOG0611|consen 204 ADK------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR----------------- 260 (668)
T ss_pred ccc------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH-----------------
Confidence 654 34678899999999999999888 689999999999999999999998654331
Q ss_pred ccccCCCCCCC-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 461 VISELPDPRLK-GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 461 ~~~~~~~~~l~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
.++++....+. ...|.+ ..-||++||..||++|.|+.+|..+.+--+
T Consensus 261 lvrQIs~GaYrEP~~PSd----A~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 261 LVRQISRGAYREPETPSD----ASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred HHHHhhcccccCCCCCch----HHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 11222222221 112222 566899999999999999999999877443
No 72
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=6.4e-39 Score=316.00 Aligned_cols=260 Identities=24% Similarity=0.324 Sum_probs=205.4
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||.||+|+.. +++.||||.+.... .......+.+|+++++.++||||+++++++.+ ....
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~ 77 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE----DNEL 77 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE----CCeE
Confidence 46888899999999999999875 58999999886432 22333458899999999999999999999876 3467
Q ss_pred EEEEecCCCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 302 LLVFEFMPNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
++++||+++++|.+++.... ...+++..+..++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++.
T Consensus 78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~ 154 (267)
T cd08228 78 NIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccce
Confidence 99999999999999886432 234789999999999999999999998 9999999999999999999999999988
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
...... .......++..|+|||.+.+..++.++|+||||+++|||++|+.||....... ......
T Consensus 155 ~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~-~~~~~~--------- 219 (267)
T cd08228 155 FFSSKT-----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-FSLCQK--------- 219 (267)
T ss_pred eccchh-----HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH-HHHHHH---------
Confidence 764322 11223457889999999988889999999999999999999999985432111 010000
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
+.....+ ...+...+..+.+++.+||+.+|++||++.||++.|+++.
T Consensus 220 --~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 220 --IEQCDYP---PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred --HhcCCCC---CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0111111 1112334566899999999999999999999999998863
No 73
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.4e-39 Score=320.73 Aligned_cols=271 Identities=24% Similarity=0.366 Sum_probs=197.8
Q ss_pred cCCCCCcccceeCceEEEEEEEc--CCcEEEEEEeccCCCCC-hhHHHHHHHHHHhcc---CCCCccceeeeeeecc-cC
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT--DGRIVAVKRFKTQGGPN-ADSVFLTEVDMLSRL---HHCHVVPLVGYCSEFR-GK 297 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~--~g~~vaVK~l~~~~~~~-~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~~~-~~ 297 (535)
++|+..+.||+|+||.||+|+.. +++.||||+++...... ....+.+|+.+++.+ +||||+++++++.... ..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888899999999999999863 47889999987543222 223466777777665 6999999999986432 22
Q ss_pred cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCC
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGl 377 (535)
....++||||++ ++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccc
Confidence 446799999996 69999997655566899999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhh-hcccccc
Q 009404 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL-WATPRLQ 456 (535)
Q Consensus 378 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~-~~~~~~~ 456 (535)
+...... .......||+.|+|||.+....++.++||||||+++|||++|+.||............. .......
T Consensus 157 ~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~ 230 (290)
T cd07862 157 ARIYSFQ------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 230 (290)
T ss_pred eEeccCC------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCCh
Confidence 9765432 12234568999999999988899999999999999999999999997543221111000 0000000
Q ss_pred CcccccccCCCCCCCC-------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 457 DSGTVISELPDPRLKG-------DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~-------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
........+....+.. ......+..+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 231 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000000000000000 001123455789999999999999999999986
No 74
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.1e-39 Score=332.01 Aligned_cols=250 Identities=25% Similarity=0.357 Sum_probs=193.0
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
+|+..+.||+|+||.||+|++. +++.||||++...........+.+|+++++.++|+||+++++++.+ ....++|
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv 150 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDH----NGEIQVL 150 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEecc----CCeEEEE
Confidence 3455688999999999999875 5899999999765444445668999999999999999999999865 4467999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+++|+|.+. ....+..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 151 ~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 151 LEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred EecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 999999998753 23467788899999999999999998 999999999999999999999999999876432
Q ss_pred CCCCCCCCCCccccCccccCcccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMV-----GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
. .......||..|+|||.+.. ...+.++|||||||++|||++|+.||..............
T Consensus 222 ~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~--------- 287 (353)
T PLN00034 222 M-----DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCA--------- 287 (353)
T ss_pred c-----ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH---------
Confidence 1 11233568999999998743 2345689999999999999999999963221111000000
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
+.... ....+......+.+|+.+||+.||++|||+.|++++-.
T Consensus 288 --~~~~~----~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~ 330 (353)
T PLN00034 288 --ICMSQ----PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPF 330 (353)
T ss_pred --HhccC----CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 00000 01122234456899999999999999999999998644
No 75
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.9e-39 Score=330.90 Aligned_cols=253 Identities=25% Similarity=0.343 Sum_probs=201.4
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||.||+|++.+ ++.||||++..... ......+.+|++++..++||||+++++++.+ ....
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~----~~~~ 76 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD----DEYL 76 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc----CCEE
Confidence 367888999999999999999864 89999999975421 2233458899999999999999999998876 4567
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 77 ~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~ 151 (333)
T cd05600 77 YLAMEYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGI 151 (333)
T ss_pred EEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccc
Confidence 9999999999999999753 45899999999999999999999998 999999999999999999999999999765
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccch-hhhhccccccCccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEES-LVLWATPRLQDSGT 460 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~-~~~~~~~~~~~~~~ 460 (535)
.. ......||+.|+|||++.+..++.++||||||+++|||++|..||.......... ...|.
T Consensus 152 ~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~--------- 214 (333)
T cd05600 152 VT--------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWK--------- 214 (333)
T ss_pred cc--------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcc---------
Confidence 43 2234568999999999998899999999999999999999999996543221111 00010
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..+..+... ......+..+.+++.+||..+|++||++.|++++
T Consensus 215 --~~~~~~~~~-~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 215 --ETLQRPVYD-DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred --ccccCCCCC-ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 000011100 0001234558899999999999999999999976
No 76
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.9e-39 Score=320.71 Aligned_cols=257 Identities=26% Similarity=0.430 Sum_probs=200.4
Q ss_pred cCCCCCcccceeCceEEEEEEE-----cCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQL-----TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~-----~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
++|+..+.||+|+||.||+|.+ .++..|++|.+...........+.+|+++++.++||||+++++++.. ..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~ 80 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ----EQ 80 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec----CC
Confidence 4567778999999999999985 24678999999865443444568899999999999999999999865 34
Q ss_pred eEEEEEecCCCCCHHHhhhhcc---------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVL---------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl 364 (535)
..++||||+++++|.+++.... ...+++...+.++.|++.||+|||+++ ++||||||+|||+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili 157 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILI 157 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEE
Confidence 5699999999999999985321 134788999999999999999999998 9999999999999
Q ss_pred CCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccc
Q 009404 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKG 443 (535)
Q Consensus 365 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~ 443 (535)
++++.+||+|||++......... .......++..|+|||++....++.++||||||+++|||++ |..||......
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~- 233 (283)
T cd05090 158 GEQLHVKISDLGLSREIYSADYY---RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ- 233 (283)
T ss_pred cCCCcEEeccccccccccCCcce---ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence 99999999999999876443221 11223345678999999988889999999999999999999 88888543211
Q ss_pred cchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 444 EESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
...... ...... ..+...+..+.+++.+||+.||++||++.++++.|..
T Consensus 234 --~~~~~~-----------~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 234 --EVIEMV-----------RKRQLL----PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred --HHHHHH-----------HcCCcC----CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 000000 000000 1222334558899999999999999999999998863
No 77
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=3.6e-39 Score=316.80 Aligned_cols=257 Identities=24% Similarity=0.382 Sum_probs=205.3
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
...++|...++||+|+||.||+|...+++.||+|.+..... ....+.+|+.+++.++|+||+++++++.. ...
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~ 75 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM--SPEAFLAEANLMKQLQHPRLVRLYAVVTQ-----EPI 75 (260)
T ss_pred cchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC--cHHHHHHHHHHHHhcCCcCeeeEEEEEcc-----CCc
Confidence 34567888899999999999999988899999999875432 23468999999999999999999988642 346
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
+++|||+++++|.+++.......+++.++..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||++...
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 152 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLI 152 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeec
Confidence 99999999999999997655567899999999999999999999998 999999999999999999999999999776
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
...... ......++..|+|||++....++.++||||||+++|||++ |+.||........ ....
T Consensus 153 ~~~~~~----~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~~~--------- 216 (260)
T cd05067 153 EDNEYT----AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV---IQNL--------- 216 (260)
T ss_pred CCCCcc----cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH---HHHH---------
Confidence 532211 1122345678999999988889999999999999999999 9999964332111 0000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
...... ..+...+..+.+++.+||+.+|++|||++++++.|+.+
T Consensus 217 --~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 217 --ERGYRM----PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred --HcCCCC----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 000000 11222334589999999999999999999999999753
No 78
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=336.17 Aligned_cols=243 Identities=21% Similarity=0.326 Sum_probs=200.9
Q ss_pred hcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCC--CChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcc
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG--PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 299 (535)
.++|...++||+|.||+|+++..+. ++.+|||++++... .+..+....|..++... +||.+++++..+.. ..
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT----~~ 442 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT----KE 442 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc----CC
Confidence 4678889999999999999999864 88999999997642 23334467888888777 69999999998876 66
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
++|+||||..||++..+.+ ...+++..+..++..|+.||.|||+++ |||||||.+|||||.+|.+||+||||++
T Consensus 443 ~l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcK 516 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCK 516 (694)
T ss_pred eEEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEeccccccc
Confidence 8899999999999554443 256999999999999999999999999 9999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
..... .....++.||+.|||||++.+..|+..+|.|+|||+|||||.|..||......+-..
T Consensus 517 e~m~~-----g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~Fd------------- 578 (694)
T KOG0694|consen 517 EGMGQ-----GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFD------------- 578 (694)
T ss_pred ccCCC-----CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH-------------
Confidence 76533 345678999999999999999999999999999999999999999997544321111
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM 500 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 500 (535)
.+... ...+|...+.+...+++++|..||++|.-+
T Consensus 579 ----sI~~d--~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 579 ----SIVND--EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ----HHhcC--CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 11111 113455666778899999999999999876
No 79
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.8e-39 Score=313.68 Aligned_cols=249 Identities=28% Similarity=0.438 Sum_probs=196.0
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCC
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMP 309 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~ 309 (535)
+.||+|+||.||+|++. +++.||+|.+......+....+.+|+++++.++||||+++++++.. ....++||||++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~ 76 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ----KQPIYIVMELVQ 76 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC----CCCeEEEEeecc
Confidence 36999999999999875 5899999988755444445668999999999999999999999876 346799999999
Q ss_pred CCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCC
Q 009404 310 NGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSC 389 (535)
Q Consensus 310 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 389 (535)
+++|.+++... ...+++..+..++.|++.||+|||+.+ ++|+||||+|||++.++.+||+|||++.........
T Consensus 77 ~~~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-- 150 (252)
T cd05084 77 GGDFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA-- 150 (252)
T ss_pred CCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCccccccccc--
Confidence 99999999653 245899999999999999999999998 999999999999999999999999998765432111
Q ss_pred CCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccccCCCC
Q 009404 390 SSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDP 468 (535)
Q Consensus 390 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (535)
........+..|+|||.+..+.++.++||||||+++|||++ |..||............ ..
T Consensus 151 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~--------------~~---- 211 (252)
T cd05084 151 -STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAI--------------EQ---- 211 (252)
T ss_pred -ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHH--------------Hc----
Confidence 01111223467999999999999999999999999999998 88888543221100000 00
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 469 RLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 469 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
......+...+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 212 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 212 GVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 0011122333456889999999999999999999999886
No 80
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=7.8e-39 Score=321.98 Aligned_cols=268 Identities=22% Similarity=0.345 Sum_probs=197.4
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
.++|...+.||+|+||.||+|+.. +++.||||++...........+.+|+.+++.++||||+++++++.+ ....+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~ 79 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHT----KETLT 79 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEec----CCeEE
Confidence 367888999999999999999976 5889999999765433334457889999999999999999999876 44679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||++ ++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++....
T Consensus 80 lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 154 (303)
T cd07869 80 LVFEYVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKS 154 (303)
T ss_pred EEEECCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence 9999995 6888888653 245889999999999999999999998 9999999999999999999999999987543
Q ss_pred cCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccch-hhhhc-cccccCcc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEES-LVLWA-TPRLQDSG 459 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~-~~~~~-~~~~~~~~ 459 (535)
... .......+|+.|+|||.+.+ ..++.++|||||||++|||++|..||.......... ..... ........
T Consensus 155 ~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (303)
T cd07869 155 VPS-----HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTW 229 (303)
T ss_pred CCC-----ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhc
Confidence 221 12233467899999998765 458899999999999999999999997532211100 00000 00000000
Q ss_pred cc---cccCCCCCCCCCCCH---------HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 460 TV---ISELPDPRLKGDFPK---------EEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 460 ~~---~~~~~~~~l~~~~~~---------~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
.. ........+....+. .....+.+|+.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 230 PGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00 000000000000010 01245789999999999999999999986
No 81
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.5e-39 Score=328.28 Aligned_cols=243 Identities=26% Similarity=0.326 Sum_probs=194.9
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEec
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
+.||+|+||.||+++.. +++.||||++.... .......+.+|+++++.++||||+++++++.. ....++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~~~lv~Ey 76 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT----KDRLCFVMEY 76 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc----CCEEEEEEeC
Confidence 36999999999999875 58999999997542 12333457889999999999999999988875 4567999999
Q ss_pred CCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCC
Q 009404 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP 387 (535)
Q Consensus 308 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~ 387 (535)
+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 77 ~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-- 149 (328)
T cd05593 77 VNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-- 149 (328)
T ss_pred CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCcc--
Confidence 9999999988653 45899999999999999999999998 9999999999999999999999999987543221
Q ss_pred CCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCC
Q 009404 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD 467 (535)
Q Consensus 388 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (535)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||............. ...
T Consensus 150 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~---------------~~~ 211 (328)
T cd05593 150 ---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL---------------MED 211 (328)
T ss_pred ---cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhc---------------cCC
Confidence 12234568999999999998899999999999999999999999996432211000000 000
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 009404 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQI 506 (535)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 506 (535)
. .+|...+..+.+++.+||+.||++|| ++.|++++
T Consensus 212 ~----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 212 I----KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred c----cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 1 12333445688999999999999997 89999875
No 82
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.1e-39 Score=325.97 Aligned_cols=251 Identities=24% Similarity=0.340 Sum_probs=198.9
Q ss_pred HhcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
..++|+.+.+||+|+||.||+++-++ |..+|+|+++... .....+..+.|-.+|....+|.||+|+-.|.+ ..
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD----~~ 214 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD----KE 214 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC----CC
Confidence 45788999999999999999998765 9999999998653 22333457889999999999999999988876 56
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
.+||||||++||++..+|... ..|++..+..++.+++-|++.||..| ++||||||+|+|||..|++||+||||+.
T Consensus 215 ~LYLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~ 289 (550)
T KOG0605|consen 215 YLYLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLST 289 (550)
T ss_pred eeEEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccc
Confidence 789999999999999999764 56999999999999999999999999 9999999999999999999999999986
Q ss_pred ccccCC------------------CCCCCC-----C-------------------CCccccCccccCccccccCCCCccc
Q 009404 380 RLKADG------------------LPSCSS-----S-------------------PARMQGTFGYFAPEYAMVGRASLMS 417 (535)
Q Consensus 380 ~~~~~~------------------~~~~~~-----~-------------------~~~~~gt~~y~aPE~~~~~~~s~ks 417 (535)
.+.... .+.... . ....+|||.|+|||++.+..|+...
T Consensus 290 gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~c 369 (550)
T KOG0605|consen 290 GLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKEC 369 (550)
T ss_pred hhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccc
Confidence 442200 000000 0 0123599999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCccccccc-hhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCC
Q 009404 418 DVFSFGVVLLELITGRQPIHRSITKGEE-SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDA 496 (535)
Q Consensus 418 DVwSlGvil~eLltG~~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~ 496 (535)
|.||||||+||||.|.+||....+.... .+..|... +..| .....+....+||.+|+. ||++
T Consensus 370 DwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~-----------l~fP-----~~~~~s~eA~DLI~rll~-d~~~ 432 (550)
T KOG0605|consen 370 DWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET-----------LKFP-----EEVDLSDEAKDLITRLLC-DPEN 432 (550)
T ss_pred cHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh-----------ccCC-----CcCcccHHHHHHHHHHhc-CHHH
Confidence 9999999999999999999876654322 22233211 0011 111223557889999999 9999
Q ss_pred CCC
Q 009404 497 RPT 499 (535)
Q Consensus 497 RPt 499 (535)
|.-
T Consensus 433 RLG 435 (550)
T KOG0605|consen 433 RLG 435 (550)
T ss_pred hcC
Confidence 975
No 83
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.9e-39 Score=327.93 Aligned_cols=241 Identities=24% Similarity=0.290 Sum_probs=191.6
Q ss_pred cceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCC
Q 009404 233 VGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMP 309 (535)
Q Consensus 233 LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~ 309 (535)
||+|+||.||+++.. +++.||+|++.... .......+.+|+.++..++||||+++++++.+ ....++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~ 76 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS----PEKLYLVLAFIN 76 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec----CCeEEEEEcCCC
Confidence 799999999999976 48899999987432 22333457889999999999999999998875 446799999999
Q ss_pred CCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCC
Q 009404 310 NGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSC 389 (535)
Q Consensus 310 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 389 (535)
+|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 77 ~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---- 147 (312)
T cd05585 77 GGELFHHLQRE--GRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD---- 147 (312)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC----
Confidence 99999999753 45899999999999999999999998 9999999999999999999999999987543221
Q ss_pred CCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCC
Q 009404 390 SSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469 (535)
Q Consensus 390 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (535)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .. ..+...
T Consensus 148 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~---~~--------------~~~~~~- 208 (312)
T cd05585 148 -DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE---MY--------------RKILQE- 208 (312)
T ss_pred -CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH---HH--------------HHHHcC-
Confidence 12234568999999999999999999999999999999999999996432110 00 000000
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 009404 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPT---MSEVVQI 506 (535)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~evl~~ 506 (535)
...++...+..+.+++.+||+.||++||+ +.|++.+
T Consensus 209 -~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 209 -PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred -CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 01223334456889999999999999975 5666653
No 84
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.3e-39 Score=315.60 Aligned_cols=254 Identities=28% Similarity=0.437 Sum_probs=203.0
Q ss_pred hcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
.++|+..+.||+|+||.||+|...++..+|+|.+..... ....+.+|+.+++.++|+|++++++++.+ ...++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-----~~~~l 77 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM--SPESFLEEAQIMKKLRHDKLVQLYAVVSE-----EPIYI 77 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC--CHHHHHHHHHHHHhcCCCceEEEEeEECC-----CCcEE
Confidence 456788899999999999999988888899999976433 23458999999999999999999988743 24589
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
+|||+++++|.+++.......+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 78 VTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIED 154 (260)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccC
Confidence 999999999999997654456899999999999999999999998 99999999999999999999999999987644
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
.... ......++..|+|||.+....++.++||||||+++|||++ |..||...... ......
T Consensus 155 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~----------- 216 (260)
T cd05070 155 NEYT----ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR---EVLEQV----------- 216 (260)
T ss_pred cccc----cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHH-----------
Confidence 3211 1122235678999999988889999999999999999999 88888543211 111000
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
... .....+...+..+.+++.+||..+|++|||+.++.+.|++
T Consensus 217 ~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 217 ERG----YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HcC----CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 000 0111223334568999999999999999999999999875
No 85
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.3e-39 Score=327.80 Aligned_cols=243 Identities=25% Similarity=0.301 Sum_probs=194.1
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEec
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
+.||+|+||.||+++.. +|+.||+|+++... .......+.+|+++++.++||||+++++++.. ....++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~----~~~~~lv~E~ 76 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT----HDRLCFVMEY 76 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec----CCEEEEEEeC
Confidence 36999999999999875 58999999997542 12233457789999999999999999998876 4467999999
Q ss_pred CCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCC
Q 009404 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP 387 (535)
Q Consensus 308 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~ 387 (535)
+++|+|..++... ..+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||++.......
T Consensus 77 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-- 149 (323)
T cd05595 77 ANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-- 149 (323)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC--
Confidence 9999999988653 45899999999999999999999998 9999999999999999999999999987543221
Q ss_pred CCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCC
Q 009404 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD 467 (535)
Q Consensus 388 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (535)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||........... +..
T Consensus 150 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~-----------------~~~ 209 (323)
T cd05595 150 ---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL-----------------ILM 209 (323)
T ss_pred ---CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHH-----------------Hhc
Confidence 122345689999999999999999999999999999999999999964322110000 000
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 009404 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQI 506 (535)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 506 (535)
.. ..+|...+..+.+++.+||+.||++|| ++.+++++
T Consensus 210 ~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 210 EE--IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CC--CCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 00 012233345588999999999999998 89988864
No 86
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.1e-39 Score=319.62 Aligned_cols=259 Identities=27% Similarity=0.394 Sum_probs=201.3
Q ss_pred HhcCCCCCcccceeCceEEEEEEEcC------CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeeccc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLTD------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG 296 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~~------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~ 296 (535)
.+++|...+.||+|+||.||+|.+.+ +..||+|.+...........|..|+.+++.++|+||+++++++.+
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 80 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE--- 80 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc---
Confidence 34678888999999999999998753 568999988765444445568999999999999999999998876
Q ss_pred CcceEEEEEecCCCCCHHHhhhhccc-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC---
Q 009404 297 KRAMRLLVFEFMPNGNLRDCLDGVLV-----EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL--- 368 (535)
Q Consensus 297 ~~~~~~lV~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~--- 368 (535)
....++||||+++++|.+++..... ..+++..++.++.||+.||+|||+.+ ++|+||||+|||++.++
T Consensus 81 -~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~ 156 (277)
T cd05036 81 -RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGR 156 (277)
T ss_pred -CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCc
Confidence 3356899999999999999975432 24899999999999999999999998 99999999999998654
Q ss_pred cEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchh
Q 009404 369 NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESL 447 (535)
Q Consensus 369 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~ 447 (535)
.+||+|||+++......... .......+..|+|||++.+..++.++|||||||++|||++ |..||..........
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~- 232 (277)
T cd05036 157 VAKIADFGMARDIYRASYYR---KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVME- 232 (277)
T ss_pred ceEeccCccccccCCcccee---cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-
Confidence 59999999998764322111 1112233567999999998999999999999999999997 889986433221100
Q ss_pred hhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
.. ... .....+...+..+.+++.+||+.+|++||++.+|++.|..
T Consensus 233 --~~-----------~~~----~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 233 --FV-----------TGG----GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred --HH-----------HcC----CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 00 000 0111223334558899999999999999999999999863
No 87
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.8e-39 Score=323.22 Aligned_cols=263 Identities=27% Similarity=0.422 Sum_probs=205.5
Q ss_pred HHHhcCCCCCcccceeCceEEEEEEEcC------CcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeee
Q 009404 221 EHATDKFSGSNIVGQGGSSYVYRGQLTD------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSE 293 (535)
Q Consensus 221 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~~------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~ 293 (535)
+...++|+..+.||+|+||.||++...+ ...+|+|++...........+.+|++++..+ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 3445667888999999999999998642 3689999998654434445688999999999 89999999999875
Q ss_pred cccCcceEEEEEecCCCCCHHHhhhhc--------------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 009404 294 FRGKRAMRLLVFEFMPNGNLRDCLDGV--------------LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKS 359 (535)
Q Consensus 294 ~~~~~~~~~lV~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~ 359 (535)
....+++|||+++|+|.++++.. ....+++..++.++.|++.||+|||+.+ |+||||||
T Consensus 88 ----~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp 160 (293)
T cd05053 88 ----EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAA 160 (293)
T ss_pred ----CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccce
Confidence 34679999999999999999642 2345899999999999999999999998 99999999
Q ss_pred CCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCC
Q 009404 360 SNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHR 438 (535)
Q Consensus 360 ~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~ 438 (535)
+|||+++++.+||+|||+++......... ......++..|+|||.+....++.++||||||+++|||++ |..||..
T Consensus 161 ~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 237 (293)
T cd05053 161 RNVLVTEDHVMKIADFGLARDIHHIDYYR---KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 237 (293)
T ss_pred eeEEEcCCCeEEeCcccccccccccccee---ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCC
Confidence 99999999999999999998765432111 1122234678999999988899999999999999999998 8888854
Q ss_pred ccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 439 SITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
......... +.. ......+...+..+.+|+.+||+.||++|||+.|+++.|+.+.
T Consensus 238 ~~~~~~~~~--------------~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 238 IPVEELFKL--------------LKE----GYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCHHHHHHH--------------HHc----CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 322110000 000 0011122233456889999999999999999999999999874
No 88
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=6.5e-39 Score=322.50 Aligned_cols=260 Identities=23% Similarity=0.357 Sum_probs=204.6
Q ss_pred hcCCCCCcccceeCceEEEEEEEc------CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeeccc
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRG 296 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~ 296 (535)
.++|...+.||+|+||.||++... ++..||||+++........+.+.+|+++++++ +||||+++++++..
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--- 110 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI--- 110 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec---
Confidence 356888899999999999999752 24579999987654444455689999999999 89999999999876
Q ss_pred CcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecC
Q 009404 297 KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLG 376 (535)
Q Consensus 297 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFG 376 (535)
....++||||+++|+|.++++......+++.++..++.|++.||+|||+++ |+|+||||+|||++.++.++|+|||
T Consensus 111 -~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 111 -GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred -CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCc
Confidence 345799999999999999997644444899999999999999999999998 9999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccc
Q 009404 377 MAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRL 455 (535)
Q Consensus 377 la~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~ 455 (535)
++......... .......++..|+|||.+....++.++||||||+++|||++ |..||......... ....
T Consensus 187 ~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~--~~~~---- 257 (302)
T cd05055 187 LARDIMNDSNY---VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKF--YKLI---- 257 (302)
T ss_pred ccccccCCCce---eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHH--HHHH----
Confidence 99866433211 11122345778999999999999999999999999999998 89998543221110 0000
Q ss_pred cCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 456 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
. .......+...+..+.+++.+||+.+|++|||+.|+++.|.++
T Consensus 258 -------~----~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 258 -------K----EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -------H----cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0 0000011222234589999999999999999999999999875
No 89
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.6e-39 Score=315.54 Aligned_cols=255 Identities=28% Similarity=0.442 Sum_probs=203.0
Q ss_pred hcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
.++|+..+.||+|+||.||+|++.+...||+|++.... ...+.|.+|+++++.++||||+++++++.+ ...++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-----~~~~l 77 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-----EPIYI 77 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc--cCHHHHHHHHHHHHhCCCCCcceEEEEECC-----CCcEE
Confidence 35688889999999999999998777789999997533 233468999999999999999999987643 24589
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||.+.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIED 154 (262)
T ss_pred EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeeccc
Confidence 999999999999997654456899999999999999999999998 99999999999999999999999999976644
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
.... ......++..|+|||+.....++.++||||||+++|||++ |..||........... .
T Consensus 155 ~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~-------~------- 216 (262)
T cd05071 155 NEYT----ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-------V------- 216 (262)
T ss_pred cccc----cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHH-------H-------
Confidence 3211 1122346678999999988899999999999999999999 7778854322110000 0
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
... .....+...+..+.+++.+||+.||++||++.++++.|+..
T Consensus 217 ~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 217 ERG----YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred hcC----CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 000 00111233455688999999999999999999999999875
No 90
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=7e-39 Score=320.08 Aligned_cols=260 Identities=25% Similarity=0.402 Sum_probs=202.6
Q ss_pred CCCCCcccceeCceEEEEEEEc------CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
+|...+.||+|+||.||+|... ....+++|.+...........+.+|+.+++.++||||+++++.+.. ..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~ 76 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ----DG 76 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec----CC
Confidence 4667789999999999999863 2357999988765443444568899999999999999999998875 34
Q ss_pred eEEEEEecCCCCCHHHhhhhcc----------------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVL----------------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDI 357 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DL 357 (535)
..++++||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~di 153 (290)
T cd05045 77 PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDL 153 (290)
T ss_pred CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhh
Confidence 5699999999999999986421 124789999999999999999999998 999999
Q ss_pred CCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCC
Q 009404 358 KSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPI 436 (535)
Q Consensus 358 k~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~ 436 (535)
||+|||+++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||
T Consensus 154 kp~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~ 230 (290)
T cd05045 154 AARNVLVAEGRKMKISDFGLSRDVYEEDSY---VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 230 (290)
T ss_pred hhheEEEcCCCcEEeccccccccccCccch---hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999765432211 11122345678999999988889999999999999999998 88898
Q ss_pred CCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCC
Q 009404 437 HRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513 (535)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~ 513 (535)
...... ...... .+ ......+...+..+.+++.+||+.+|++||++.|+++.|+++..+
T Consensus 231 ~~~~~~---~~~~~~-----------~~----~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 231 PGIAPE---RLFNLL-----------KT----GYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred CCCCHH---HHHHHH-----------hC----CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 543221 111110 00 011112233345688999999999999999999999999988643
No 91
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5.1e-39 Score=334.57 Aligned_cols=265 Identities=23% Similarity=0.368 Sum_probs=205.1
Q ss_pred HHHHhcCCCCCcccceeCceEEEEEEEc------CCcEEEEEEeccCCCCChhHHHHHHHHHHhccC-CCCccceeeeee
Q 009404 220 LEHATDKFSGSNIVGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HCHVVPLVGYCS 292 (535)
Q Consensus 220 l~~~~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~ 292 (535)
++...++|...+.||+|+||.||+|++. .++.||||+++..........+.+|+++|..+. ||||+++++++.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 3444566778899999999999999864 246899999986544444456889999999997 999999999987
Q ss_pred ecccCcceEEEEEecCCCCCHHHhhhhccc--------------------------------------------------
Q 009404 293 EFRGKRAMRLLVFEFMPNGNLRDCLDGVLV-------------------------------------------------- 322 (535)
Q Consensus 293 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-------------------------------------------------- 322 (535)
. ....++||||+++|+|.++++....
T Consensus 112 ~----~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (401)
T cd05107 112 K----GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESA 187 (401)
T ss_pred c----CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcccc
Confidence 6 3457999999999999999965311
Q ss_pred ----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 009404 323 ----------------------------------------------EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRD 356 (535)
Q Consensus 323 ----------------------------------------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~D 356 (535)
..+++..++.++.|++.||+|||+.+ ++|||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrd 264 (401)
T cd05107 188 DYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRD 264 (401)
T ss_pred CccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCccc
Confidence 13677888999999999999999987 99999
Q ss_pred CCCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCC
Q 009404 357 IKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQP 435 (535)
Q Consensus 357 Lk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P 435 (535)
|||+|||+++++.+||+|||+++........ .......++..|+|||.+....++.++||||||+++|||++ |+.|
T Consensus 265 lkp~NiLl~~~~~~kL~DfGla~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P 341 (401)
T cd05107 265 LAARNVLICEGKLVKICDFGLARDIMRDSNY---ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTP 341 (401)
T ss_pred CCcceEEEeCCCEEEEEecCcceeccccccc---ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999865432211 11122346788999999998889999999999999999998 8888
Q ss_pred CCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 436 IHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
|............. . .......+...+..+.+++.+||..+|++||++.||++.|+.+.
T Consensus 342 ~~~~~~~~~~~~~~-------------~----~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 342 YPELPMNEQFYNAI-------------K----RGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CCCCCchHHHHHHH-------------H----cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 85432211100000 0 00011122233456899999999999999999999999998864
No 92
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=4.8e-39 Score=319.40 Aligned_cols=263 Identities=27% Similarity=0.396 Sum_probs=207.8
Q ss_pred hcCCCCCcccceeCceEEEEEEEcC-----CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCc
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTD-----GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKR 298 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~-----g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 298 (535)
.++|...+.||+|+||.||+|.+.+ +..|++|++...........+.+|+.+++.++|+||+++++++.+. .
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---~ 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED---G 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---C
Confidence 4677888999999999999999865 7889999987655444556688999999999999999999987653 2
Q ss_pred ceEEEEEecCCCCCHHHhhhhccc------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEE
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVLV------EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKI 372 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL 372 (535)
...++++||+++++|.+++..... ..+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEE
Confidence 356899999999999999965422 35899999999999999999999998 999999999999999999999
Q ss_pred EecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhc
Q 009404 373 TDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWA 451 (535)
Q Consensus 373 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~ 451 (535)
+|||+++.+....... ......++..|+|||++....++.++||||||+++||+++ |+.||...... ....+.
T Consensus 159 ~d~g~~~~~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~ 232 (280)
T cd05043 159 TDNALSRDLFPMDYHC---LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF---EMAAYL 232 (280)
T ss_pred CCCCCcccccCCceEE---eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH---HHHHHH
Confidence 9999998654332111 1122345678999999988889999999999999999999 99998643221 111110
Q ss_pred cccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCC
Q 009404 452 TPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513 (535)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~ 513 (535)
. ...... .+..++..+.+++.+||..||++|||+.|+++.|..+..+
T Consensus 233 ~-----------~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 233 K-----------DGYRLA----QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred H-----------cCCCCC----CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 0 000001 1112234588999999999999999999999999988643
No 93
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=9.2e-39 Score=317.34 Aligned_cols=261 Identities=26% Similarity=0.403 Sum_probs=204.3
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCc----EEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~----~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
++|+..+.||+|+||+||+|++. +++ .||+|++...........+.+|+.+++.++||||+++++++.. .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~ 81 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-----S 81 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-----C
Confidence 46777899999999999999864 344 4899999866554555668899999999999999999999864 2
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..++++||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 82 ~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 82 TVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred CcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCcee
Confidence 3578999999999999997532 45899999999999999999999998 9999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDS 458 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
........ .......++..|+|||......++.++||||||+++|||++ |..||....... ...+.
T Consensus 158 ~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~------- 224 (279)
T cd05109 158 LLDIDETE---YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE---IPDLL------- 224 (279)
T ss_pred ecccccce---eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHH-------
Confidence 76432210 01112234678999999998899999999999999999998 888885432111 10000
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcc
Q 009404 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515 (535)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~ 515 (535)
...... ..+...+..+.+++.+||+.||++||++.++++.|.+++.+..
T Consensus 225 ----~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05109 225 ----EKGERL----PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPS 273 (279)
T ss_pred ----HCCCcC----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCc
Confidence 000000 1112234458899999999999999999999999999877663
No 94
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=6.6e-39 Score=316.78 Aligned_cols=259 Identities=25% Similarity=0.401 Sum_probs=202.2
Q ss_pred HHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeeccc--
Q 009404 221 EHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRG-- 296 (535)
Q Consensus 221 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~-- 296 (535)
+.+++.|+..+.||+|+||.||+|... +++.||+|++.... .....+..|+.+++.+ +|+||+++++++.....
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred CChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC--ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 346677888899999999999999875 48899999987543 3334588999999998 79999999999875432
Q ss_pred CcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecC
Q 009404 297 KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLG 376 (535)
Q Consensus 297 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFG 376 (535)
.....+++|||+++++|.+++.......+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.++|+|||
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCC
Confidence 1346799999999999999998654456899999999999999999999998 9999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCCccccCccccCccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhc
Q 009404 377 MAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM-----VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA 451 (535)
Q Consensus 377 la~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~ 451 (535)
++....... .......|+..|+|||++. ...++.++|||||||++|||++|+.||........... .
T Consensus 157 ~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~-~-- 228 (272)
T cd06637 157 VSAQLDRTV-----GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL-I-- 228 (272)
T ss_pred Cceeccccc-----ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH-H--
Confidence 987654321 1223456889999999886 34578899999999999999999999964322111100 0
Q ss_pred cccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 452 TPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
....... ..+...+..+.+|+.+||..+|.+|||+.|+++.
T Consensus 229 -----------~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 229 -----------PRNPAPR---LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred -----------hcCCCCC---CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 0000000 0111233458899999999999999999999863
No 95
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.5e-39 Score=330.68 Aligned_cols=246 Identities=24% Similarity=0.284 Sum_probs=198.6
Q ss_pred cCCCCCcccceeCceEEEEEEEcC--CcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD--GRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~--g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
++|+..+.||+|+||.||+|.+.+ +..||+|++.... .......+.+|+.+++.++||||+++++++.+ ...
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~----~~~ 105 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD----ESY 105 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe----CCE
Confidence 467888999999999999998654 3689999986432 22334458899999999999999999999876 457
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~ 180 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKV 180 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCee
Confidence 79999999999999999764 45899999999999999999999998 99999999999999999999999999976
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
.... .....||+.|+|||++.+..++.++|||||||++|||++|..||..........
T Consensus 181 ~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~-------------- 238 (340)
T PTZ00426 181 VDTR--------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQ-------------- 238 (340)
T ss_pred cCCC--------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHH--------------
Confidence 5422 234568999999999998889999999999999999999999996432211000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQI 506 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 506 (535)
.+.... ..+|...+..+.+++.+||+.||++|+ +++|++++
T Consensus 239 ---~i~~~~--~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 239 ---KILEGI--IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ---HHhcCC--CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 000000 012223344578899999999999995 89998875
No 96
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=7.2e-39 Score=328.01 Aligned_cols=265 Identities=27% Similarity=0.419 Sum_probs=203.2
Q ss_pred HhcCCCCCcccceeCceEEEEEEE------cCCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeecc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQL------TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFR 295 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~------~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~ 295 (535)
..++|...+.||+|+||.||+|.+ .+++.||||+++..........+.+|+.++..+ +||||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~- 83 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 83 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC-
Confidence 346788899999999999999974 347899999998654444445688999999999 789999999988653
Q ss_pred cCcceEEEEEecCCCCCHHHhhhhcc------------------------------------------------------
Q 009404 296 GKRAMRLLVFEFMPNGNLRDCLDGVL------------------------------------------------------ 321 (535)
Q Consensus 296 ~~~~~~~lV~e~~~~gsL~~~l~~~~------------------------------------------------------ 321 (535)
....+++|||+++|+|.+++....
T Consensus 84 --~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 84 --GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred --CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 235689999999999999986421
Q ss_pred -----------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCCC
Q 009404 322 -----------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCS 390 (535)
Q Consensus 322 -----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 390 (535)
...+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||++.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--- 235 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--- 235 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcch---
Confidence 123678888999999999999999998 999999999999999999999999999765432110
Q ss_pred CCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccccCCCCC
Q 009404 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469 (535)
Q Consensus 391 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (535)
.......++..|+|||.+....++.++||||||+++|||++ |..||........ ... . +......
T Consensus 236 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~~----~-------~~~~~~~- 301 (343)
T cd05103 236 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCR----R-------LKEGTRM- 301 (343)
T ss_pred hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--HHH----H-------HhccCCC-
Confidence 11122345678999999988899999999999999999997 8888854322110 000 0 0000000
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCC
Q 009404 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513 (535)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~ 513 (535)
..+......+.+++..||+.||++|||+.|+++.|+.+.+.
T Consensus 302 ---~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 302 ---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred ---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11111234588999999999999999999999999988653
No 97
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=7.9e-39 Score=326.64 Aligned_cols=278 Identities=22% Similarity=0.318 Sum_probs=200.1
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeeccc-CcceEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG-KRAMRL 302 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~-~~~~~~ 302 (535)
+|+..+.||+|+||.||+|+.. +++.||||++..... ......+.+|+++++.++||||+++++++..... .....+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4677889999999999999875 589999999874322 2223458899999999999999999998864332 223579
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||++ ++|.+++... ..+++..+..++.|+++||.|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 81 lv~e~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELME-SDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCC-CCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9999995 6899988653 45899999999999999999999998 9999999999999999999999999998654
Q ss_pred cCCCCCCCCCCCccccCccccCcccccc--CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhh-hcccc-----
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMV--GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL-WATPR----- 454 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~-~~~~~----- 454 (535)
..... ........||+.|+|||++.. ..++.++||||||+++|||++|+.||............. .....
T Consensus 155 ~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 155 NDTPT--AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccCc--cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 32211 112234578999999998865 678999999999999999999999996432211000000 00000
Q ss_pred --c--cCcccccccCC---CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhhhCC
Q 009404 455 --L--QDSGTVISELP---DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI--LSTIAP 512 (535)
Q Consensus 455 --~--~~~~~~~~~~~---~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~l~~ 512 (535)
. ......+..+. ...+...++ .....+.+++.+||+.||++|||+.|+++. +..+..
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFP-NADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcC-CCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 0 00000000000 000000011 123457899999999999999999999975 444444
No 98
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=8.7e-39 Score=313.43 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=198.6
Q ss_pred CCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~ 305 (535)
+|+..+.||+|+||.||++.+.++..+|+|.+..... ....|.+|+++++.++||||+++++++.+ ....++||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~lv~ 78 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM--SEDDFIEEAKVMMKLSHPNLVQLYGVCTK----QRPIFIVT 78 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEEEEEEEEcC----CCceEEEE
Confidence 4677889999999999999988778899999864332 23458899999999999999999998765 34679999
Q ss_pred ecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 306 EFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 306 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 79 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 79 EYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred ecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccccc
Confidence 9999999999997543 35899999999999999999999998 9999999999999999999999999987654322
Q ss_pred CCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCccccccc
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (535)
.. ......++..|+|||.+....++.++||||||+++|||++ |+.||........ ... +..
T Consensus 155 ~~----~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~~~-----------~~~ 216 (256)
T cd05059 155 YT----SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV---VES-----------VSA 216 (256)
T ss_pred cc----ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH---HHH-----------HHc
Confidence 11 1112234567999999998899999999999999999999 7888864322110 000 000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 465 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.... ..+...+..+.+++.+||..+|++|||+.|+++.|.
T Consensus 217 ~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 217 GYRL----YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred CCcC----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 0011 112223456899999999999999999999999873
No 99
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=333.90 Aligned_cols=258 Identities=26% Similarity=0.360 Sum_probs=210.3
Q ss_pred CCCcccceeCceEEEEEEEcC--C--cEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 228 SGSNIVGQGGSSYVYRGQLTD--G--RIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 228 ~~~~~LG~G~fG~Vy~~~~~~--g--~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
...++||+|.||.|++|.|+. | -.||||.++.........+|++|+.+|.+|+|||+++|+|+..+ ....+
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-----qp~mM 187 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-----QPAMM 187 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-----chhhH
Confidence 345789999999999999864 3 36999999987765567789999999999999999999999875 34589
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
|||+++.|+|.+.|++-....|....+..++.|||.||.||..++ +|||||.++|+||-....|||+|||+.+-+..
T Consensus 188 V~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 188 VFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred HhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCC
Confidence 999999999999998844455888899999999999999999998 99999999999999888999999999998865
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
.... ........-.+.|+|||.+....++.+||||+|||++|||+| |+.||-..... .+
T Consensus 265 ned~--Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~------------------qI 324 (1039)
T KOG0199|consen 265 NEDM--YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI------------------QI 324 (1039)
T ss_pred CCcc--eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH------------------HH
Confidence 4311 011112234678999999999999999999999999999999 67888543211 12
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH-HHhhhCCC
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ-ILSTIAPD 513 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~-~L~~l~~~ 513 (535)
.+.+|..-+...|+.+++.++++++.||..+|.+|||+..|.+ .+...++.
T Consensus 325 L~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~eaqp 376 (1039)
T KOG0199|consen 325 LKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQP 376 (1039)
T ss_pred HHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcCC
Confidence 2233344445668888999999999999999999999999984 34444443
No 100
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.1e-38 Score=313.44 Aligned_cols=253 Identities=30% Similarity=0.449 Sum_probs=202.0
Q ss_pred cCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
++|...+.||+|++|.||++.+.++..+|+|.+.... .....+.+|+++++.++|+|++++++++.. ...+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~v 78 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT--MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-----EPIYIV 78 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC--ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-----CCcEEE
Confidence 4577788999999999999998877789999886543 234558899999999999999999988742 246899
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+++++|.+++.......+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence 99999999999997655556899999999999999999999998 999999999999999999999999999766433
Q ss_pred CCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
... ......++..|+|||......++.++||||||+++|||++ |..||....... ...+. .
T Consensus 156 ~~~----~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~-----------~ 217 (260)
T cd05069 156 EYT----ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE---VLEQV-----------E 217 (260)
T ss_pred ccc----ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH-----------H
Confidence 211 1122345678999999988899999999999999999999 888986432211 10000 0
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
... ....+...+..+.+++.+||+.||++||+++++++.|++
T Consensus 218 ~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 218 RGY----RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred cCC----CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 000 011223345568999999999999999999999999975
No 101
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=8.1e-39 Score=319.04 Aligned_cols=253 Identities=25% Similarity=0.381 Sum_probs=200.8
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
+|+..++||+|+||+||++... +++.||||++..... ......+.+|+.+++.++||||+++++++.+ ....+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~ 76 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET----KDALC 76 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC----CCeEE
Confidence 3677889999999999999875 589999999975321 1223447789999999999999999998875 34679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++....
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 77 LVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIP 153 (285)
T ss_pred EEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 9999999999999887544456999999999999999999999998 9999999999999999999999999987654
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
... ......|+..|+|||.+....++.++||||||+++|||++|+.||.............
T Consensus 154 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~------------- 214 (285)
T cd05605 154 EGE------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVE------------- 214 (285)
T ss_pred CCC------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHH-------------
Confidence 321 1223468899999999998899999999999999999999999996432211100000
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQI 506 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 506 (535)
..+. .....++...+..+.+|+.+||+.||++|| +++++++.
T Consensus 215 ~~~~--~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 215 RRVK--EDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HHhh--hcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 0000 001122334456689999999999999999 88898775
No 102
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.5e-38 Score=312.25 Aligned_cols=249 Identities=25% Similarity=0.412 Sum_probs=196.0
Q ss_pred cceeCceEEEEEEEc---CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCC
Q 009404 233 VGQGGSSYVYRGQLT---DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMP 309 (535)
Q Consensus 233 LG~G~fG~Vy~~~~~---~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~ 309 (535)
||+|+||.||+|.+. ++..||+|++.........+.|.+|+.++++++||||+++++++.. ...++||||++
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-----~~~~lv~e~~~ 77 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-----EALMLVMEMAS 77 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-----CCeEEEEEeCC
Confidence 899999999999864 3567999999766544445668999999999999999999998743 25689999999
Q ss_pred CCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCC
Q 009404 310 NGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSC 389 (535)
Q Consensus 310 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 389 (535)
+++|.+++... ...+++..++.++.|++.||+|||+++ ++||||||+|||++.++.+||+|||++.....+....
T Consensus 78 ~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~- 152 (257)
T cd05115 78 GGPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY- 152 (257)
T ss_pred CCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccce-
Confidence 99999999753 245899999999999999999999998 9999999999999999999999999998654332111
Q ss_pred CCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccccCCCC
Q 009404 390 SSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDP 468 (535)
Q Consensus 390 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (535)
.......++..|+|||.+....++.++||||||+++|||++ |..||....... ..... ....
T Consensus 153 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~-----------~~~~-- 215 (257)
T cd05115 153 -KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE---VMSFI-----------EQGK-- 215 (257)
T ss_pred -eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHH-----------HCCC--
Confidence 11111234578999999988889999999999999999996 999986443211 10000 0000
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 469 RLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 469 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
....+..++..+.+++.+||..+|++||++.+|.+.|+.+
T Consensus 216 --~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 216 --RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred --CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1112333445688999999999999999999999999865
No 103
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=7.8e-39 Score=313.94 Aligned_cols=251 Identities=23% Similarity=0.353 Sum_probs=198.6
Q ss_pred CCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~ 305 (535)
+|...+.||+|+||.||+|.+.++..+|||.+.... .....|.+|+.+++.++||||+++++++.+ ....++||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~ 78 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMKLSHEKLVQLYGVCTK----QRPIYIVT 78 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc--ccHHHHHHHHHHHhcCCCCCeeeEEEEEcc----CCCcEEEE
Confidence 466678899999999999998777789999987543 223568999999999999999999999865 33569999
Q ss_pred ecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 306 EFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 306 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||+++......
T Consensus 79 e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 79 EYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred EcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 9999999999997643 36899999999999999999999998 9999999999999999999999999987654332
Q ss_pred CCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCccccccc
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (535)
.. ......++..|+|||.+....++.++||||||+++|||++ |..||....... ..... ..
T Consensus 155 ~~----~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~-----------~~ 216 (256)
T cd05113 155 YT----SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE---TVEKV-----------SQ 216 (256)
T ss_pred ee----ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHH-----------hc
Confidence 11 1112345678999999988889999999999999999999 899985433211 00000 00
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 465 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.... ..+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 217 ~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 217 GLRL----YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCC----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0000 011112355899999999999999999999998774
No 104
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.2e-38 Score=309.88 Aligned_cols=259 Identities=24% Similarity=0.374 Sum_probs=206.0
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||.||+|... +++.||+|.++... .......+.+|++++++++|+|++++++++.+ ....
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~----~~~~ 77 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE----NNEL 77 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec----CCeE
Confidence 57888899999999999999986 68999999886432 22334568899999999999999999999876 3467
Q ss_pred EEEEecCCCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 302 LLVFEFMPNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
++||||+++++|.+++.... ...+++..+..++.+++.||+|||+.+ ++|+||+|+||++++++.++|+|||++.
T Consensus 78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~ 154 (267)
T cd08224 78 NIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceee
Confidence 99999999999999986532 244899999999999999999999998 9999999999999999999999999987
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
...... .......++..|+|||.+.+..++.++||||||+++|+|++|+.||...... ....
T Consensus 155 ~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~--------- 216 (267)
T cd08224 155 FFSSKT-----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSL--------- 216 (267)
T ss_pred eccCCC-----cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc----HHHH---------
Confidence 654321 1122345788999999998888999999999999999999999998543211 0000
Q ss_pred cccccCCCCCCCCCCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 460 TVISELPDPRLKGDFPK-EEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
...+.... ....+. ..+..+.+++.+||..+|++|||+.+|++.|+++.
T Consensus 217 --~~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 217 --CKKIEKCD-YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred --HhhhhcCC-CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 00000000 011122 34456889999999999999999999999999874
No 105
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.4e-39 Score=323.70 Aligned_cols=263 Identities=26% Similarity=0.411 Sum_probs=204.5
Q ss_pred hcCCCCCcccceeCceEEEEEEEc--------CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeec
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT--------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEF 294 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~--------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~ 294 (535)
.++|.+.+.||+|+||.||+++.. +...+|+|.++..........+.+|+++++.+ +||||+++++++..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~- 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-
Confidence 456888899999999999999753 23579999998654334445688899999999 79999999999876
Q ss_pred ccCcceEEEEEecCCCCCHHHhhhhccc--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 009404 295 RGKRAMRLLVFEFMPNGNLRDCLDGVLV--------------EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSS 360 (535)
Q Consensus 295 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~ 360 (535)
....++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||+.+ ++||||||+
T Consensus 96 ---~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~ 169 (307)
T cd05098 96 ---DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 169 (307)
T ss_pred ---CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHH
Confidence 3467999999999999999975321 24889999999999999999999998 999999999
Q ss_pred CEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCc
Q 009404 361 NILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRS 439 (535)
Q Consensus 361 NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~ 439 (535)
|||++.++.+||+|||++......... .......++..|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus 170 Nill~~~~~~kL~dfg~a~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~ 246 (307)
T cd05098 170 NVLVTEDNVMKIADFGLARDIHHIDYY---KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 246 (307)
T ss_pred heEEcCCCcEEECCCcccccccccchh---hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 999999999999999998765432111 11112234568999999988889999999999999999998 78887532
Q ss_pred cccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCc
Q 009404 440 ITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514 (535)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~ 514 (535)
... ..... +.. ......+...+..+.+++.+||+.+|++|||+.++++.|.++.+..
T Consensus 247 ~~~---~~~~~-----------~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 247 PVE---ELFKL-----------LKE----GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred CHH---HHHHH-----------HHc----CCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 211 00000 000 0011223334456889999999999999999999999999986653
No 106
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.1e-38 Score=313.12 Aligned_cols=259 Identities=24% Similarity=0.358 Sum_probs=197.6
Q ss_pred CCCcccceeCceEEEEEEEcC-Cc--EEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeeccc--CcceE
Q 009404 228 SGSNIVGQGGSSYVYRGQLTD-GR--IVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG--KRAMR 301 (535)
Q Consensus 228 ~~~~~LG~G~fG~Vy~~~~~~-g~--~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~--~~~~~ 301 (535)
.+.+.||+|+||.||+|++.+ ++ .||+|.++... .......+.+|+++++.++|+||+++++++..... .....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456889999999999999765 33 69999887542 22334568899999999999999999998754322 12356
Q ss_pred EEEEecCCCCCHHHhhhhc----ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCC
Q 009404 302 LLVFEFMPNGNLRDCLDGV----LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGl 377 (535)
+++|||+++|+|.+++... ....+++.....++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCc
Confidence 8999999999999987422 1234899999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhcccccc
Q 009404 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 378 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
++........ .......+++.|+|||++....++.++||||||+++|||++ |+.||...... ..... ..
T Consensus 159 ~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~----~~ 228 (272)
T cd05075 159 SKKIYNGDYY---RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS---EIYDY----LR 228 (272)
T ss_pred ccccCcccce---ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHH----HH
Confidence 9876543211 11122345678999999998899999999999999999999 78888542221 10000 00
Q ss_pred CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
.. ... ..+...+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 229 ~~-------~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 229 QG-------NRL----KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred cC-------CCC----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 000 11222345588999999999999999999999999875
No 107
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=8.3e-39 Score=324.82 Aligned_cols=243 Identities=26% Similarity=0.364 Sum_probs=193.3
Q ss_pred cccceeCceEEEEEEEc----CCcEEEEEEeccCC---CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 231 NIVGQGGSSYVYRGQLT----DGRIVAVKRFKTQG---GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~----~g~~vaVK~l~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+.||+|+||.||+++.. +++.||||+++... .......+.+|+++|+.++||||+++++++.. +...++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~----~~~~~l 77 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT----GGKLYL 77 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec----CCeEEE
Confidence 57999999999999853 47899999997532 12223447789999999999999999998876 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||+++++|.+++... ..+.+..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 78 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 152 (323)
T cd05584 78 ILEYLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIH 152 (323)
T ss_pred EEeCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeeccc
Confidence 99999999999999753 45788899999999999999999998 99999999999999999999999999875432
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
.. .......||+.|+|||.+....++.++||||||+++|||++|+.||......... .
T Consensus 153 ~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~-----------------~ 210 (323)
T cd05584 153 EG-----TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTI-----------------D 210 (323)
T ss_pred CC-----CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHH-----------------H
Confidence 21 1223456899999999999888999999999999999999999999643221100 0
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 506 (535)
.+.... ...+...+..+.+++.+||+.||++|| ++.+++++
T Consensus 211 ~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 211 KILKGK--LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred HHHcCC--CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 000000 112233345588999999999999999 88888874
No 108
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=7.4e-39 Score=318.58 Aligned_cols=255 Identities=25% Similarity=0.372 Sum_probs=198.8
Q ss_pred CCCCcccceeCceEEEEEEEcC------CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTD------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
|...+.||+|+||.||+|...+ ++.||+|+++..........+.+|+.++..++||||+++++++.+ ...
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~----~~~ 82 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK----EQP 82 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----CCc
Confidence 5556889999999999998642 578999999865443344568899999999999999999999876 345
Q ss_pred EEEEEecCCCCCHHHhhhhcc--------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 009404 301 RLLVFEFMPNGNLRDCLDGVL--------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE 366 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~ 366 (535)
.++++||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFD 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecC
Confidence 699999999999999985311 134788999999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccc
Q 009404 367 NLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEE 445 (535)
Q Consensus 367 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~ 445 (535)
++.+||+|||+++........ .......+++.|+|||.+..+.++.++||||||+++|||++ |..||......
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--- 233 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYY---KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--- 233 (283)
T ss_pred CCceEecccccccccccchhe---eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH---
Confidence 999999999998866433211 11122345678999999988889999999999999999998 77787543221
Q ss_pred hhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
.... .+.... ....+...+..+.+++..||+.+|++||++.||+..|+.
T Consensus 234 ~~~~--------------~i~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 234 DVIE--------------MIRNRQ-VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHH--------------HHHcCC-cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1100 000000 011233344558899999999999999999999999864
No 109
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=9.1e-39 Score=321.57 Aligned_cols=261 Identities=25% Similarity=0.428 Sum_probs=202.0
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-Cc--EEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcce
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GR--IVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~--~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 300 (535)
++|+..+.||+|+||.||+|.+.+ +. .+++|.++..........+.+|++++.++ +||||+++++++.+ ...
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~----~~~ 82 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH----RGY 82 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC----CCC
Confidence 467778999999999999998753 44 46888776544344455688999999999 89999999999875 346
Q ss_pred EEEEEecCCCCCHHHhhhhcc--------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 009404 301 RLLVFEFMPNGNLRDCLDGVL--------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE 366 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~ 366 (535)
.++||||+++++|.++++... ...+++..++.++.|++.||+|||+.+ ++||||||+|||+++
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~ 159 (303)
T cd05088 83 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGE 159 (303)
T ss_pred ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecC
Confidence 799999999999999996532 124789999999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccc
Q 009404 367 NLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEE 445 (535)
Q Consensus 367 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~ 445 (535)
++.+||+|||++...... .......++..|+|||++....++.++||||||+++|||+| |..||.......
T Consensus 160 ~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-- 231 (303)
T cd05088 160 NYVAKIADFGLSRGQEVY------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-- 231 (303)
T ss_pred CCcEEeCccccCcccchh------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH--
Confidence 999999999998643211 01111234567999999988889999999999999999998 999985432211
Q ss_pred hhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCccc
Q 009404 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSR 516 (535)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~~ 516 (535)
..... .. ......+...+..+.+++.+||+.+|++||++.++++.|..+..+...
T Consensus 232 -~~~~~-----------~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~ 286 (303)
T cd05088 232 -LYEKL-----------PQ----GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 286 (303)
T ss_pred -HHHHH-----------hc----CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhh
Confidence 00000 00 001111222344588999999999999999999999999988766553
No 110
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.4e-38 Score=310.85 Aligned_cols=260 Identities=24% Similarity=0.345 Sum_probs=205.5
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||.||+++.. +++.+|||.+..... ......+.+|+.+++.++||||+++++++.+ ....
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~ 77 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE----DNEL 77 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe----CCeE
Confidence 46777889999999999999964 689999998865322 2233468899999999999999999999876 4467
Q ss_pred EEEEecCCCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 302 LLVFEFMPNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
+++|||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.
T Consensus 78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~ 154 (267)
T cd08229 78 NIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhh
Confidence 99999999999999986422 245899999999999999999999998 9999999999999999999999999987
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
...... .......++..|+|||++....++.++||||||+++|+|++|..||........ ...
T Consensus 155 ~~~~~~-----~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~----------- 217 (267)
T cd08229 155 FFSSKT-----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLC----------- 217 (267)
T ss_pred ccccCC-----cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH-HHh-----------
Confidence 664332 112334678899999999888899999999999999999999999854321100 000
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
..+.....+.. .+...+..+.+++.+||+.||++|||+.+|++.+.++.
T Consensus 218 ~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 218 KKIEQCDYPPL---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred hhhhcCCCCCC---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 00111111111 12234556899999999999999999999999998874
No 111
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.9e-38 Score=311.15 Aligned_cols=249 Identities=27% Similarity=0.389 Sum_probs=195.1
Q ss_pred ccceeCceEEEEEEEc---CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEec
Q 009404 232 IVGQGGSSYVYRGQLT---DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 232 ~LG~G~fG~Vy~~~~~---~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
.||+|+||.||+|.++ ++..+|+|+++.... ....+.+.+|+.+++.++||||+++++++.. ...++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~lv~e~ 76 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-----ESWMLVMEL 76 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----CCcEEEEec
Confidence 5899999999999753 478899999875432 2234568899999999999999999998743 245899999
Q ss_pred CCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCC
Q 009404 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP 387 (535)
Q Consensus 308 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~ 387 (535)
+++++|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||++.........
T Consensus 77 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~ 151 (257)
T cd05116 77 AELGPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY 151 (257)
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCe
Confidence 9999999999753 45899999999999999999999998 999999999999999999999999999876543211
Q ss_pred CCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 388 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
. .......++..|+|||.+....++.++||||||+++|||++ |..||...... ..... +....
T Consensus 152 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~-----------i~~~~ 215 (257)
T cd05116 152 Y--KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN---EVTQM-----------IESGE 215 (257)
T ss_pred e--eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH-----------HHCCC
Confidence 0 11122234578999999988889999999999999999998 89998643221 11100 00000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
....|...+..+.+++.+||+.||++||++.+|.+.|++.
T Consensus 216 ----~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 216 ----RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred ----CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 1112233445688999999999999999999999999863
No 112
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.7e-38 Score=308.40 Aligned_cols=248 Identities=29% Similarity=0.445 Sum_probs=197.3
Q ss_pred cccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCCC
Q 009404 231 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~ 310 (535)
++||+|+||.||+|...+++.+|+|++...........+.+|+++++.++||||+++++++.. ....++||||+++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ----RQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec----CCccEEEEECCCC
Confidence 368999999999999888999999998765544444568899999999999999999999876 3456999999999
Q ss_pred CCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCCC
Q 009404 311 GNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCS 390 (535)
Q Consensus 311 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 390 (535)
++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++........
T Consensus 77 ~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~---- 148 (250)
T cd05085 77 GDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY---- 148 (250)
T ss_pred CcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceecccccc----
Confidence 99999986542 45899999999999999999999998 99999999999999999999999999875433211
Q ss_pred CCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccccCCCCC
Q 009404 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469 (535)
Q Consensus 391 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (535)
.......++..|+|||++....++.++||||||+++||+++ |..||.......... . +....
T Consensus 149 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~---~-----------~~~~~--- 211 (250)
T cd05085 149 SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQARE---Q-----------VEKGY--- 211 (250)
T ss_pred ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH---H-----------HHcCC---
Confidence 11112234578999999998899999999999999999998 888985432211000 0 00000
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
....+...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 212 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 212 -RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred -CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 11122233456899999999999999999999999875
No 113
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.4e-38 Score=319.15 Aligned_cols=260 Identities=26% Similarity=0.428 Sum_probs=202.0
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-C--cEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcce
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-G--RIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g--~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 300 (535)
++|+..+.||+|+||.||+|.+.+ + ..+++|.++........+.+.+|++++.++ +||||+++++++.+ ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~----~~~ 77 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN----RGY 77 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc----CCc
Confidence 578888999999999999998754 3 357888887544334445688999999999 79999999998875 345
Q ss_pred EEEEEecCCCCCHHHhhhhcc--------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 009404 301 RLLVFEFMPNGNLRDCLDGVL--------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE 366 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~ 366 (535)
.+++|||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~ 154 (297)
T cd05089 78 LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGE 154 (297)
T ss_pred ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECC
Confidence 799999999999999996532 124889999999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccc
Q 009404 367 NLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEE 445 (535)
Q Consensus 367 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~ 445 (535)
++.+||+|||++....... .......+..|+|||++....++.++||||||+++|||++ |..||.......
T Consensus 155 ~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-- 226 (297)
T cd05089 155 NLASKIADFGLSRGEEVYV------KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-- 226 (297)
T ss_pred CCeEEECCcCCCcccccee------ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--
Confidence 9999999999986432110 0111123457999999988889999999999999999998 999986433211
Q ss_pred hhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcc
Q 009404 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515 (535)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~ 515 (535)
.... +. .......+...+..+.+|+.+||+.+|.+|||+.++++.|..+.....
T Consensus 227 -~~~~--------------~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 227 -LYEK--------------LP-QGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred -HHHH--------------Hh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0000 00 000111222334568899999999999999999999999998876544
No 114
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-38 Score=319.66 Aligned_cols=262 Identities=27% Similarity=0.411 Sum_probs=204.0
Q ss_pred hcCCCCCcccceeCceEEEEEEEc--------CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeec
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT--------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEF 294 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~--------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~ 294 (535)
.++|.+.+.||+|+||.||+++.. ++..||+|.+...........+.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~- 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec-
Confidence 456777899999999999999742 24579999987554344445688999999999 89999999999876
Q ss_pred ccCcceEEEEEecCCCCCHHHhhhhcc--------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 009404 295 RGKRAMRLLVFEFMPNGNLRDCLDGVL--------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSS 360 (535)
Q Consensus 295 ~~~~~~~~lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~ 360 (535)
....++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+++ ++||||||+
T Consensus 93 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~ 166 (304)
T cd05101 93 ---DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAAR 166 (304)
T ss_pred ---CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccc
Confidence 346799999999999999997532 134788999999999999999999998 999999999
Q ss_pred CEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCc
Q 009404 361 NILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRS 439 (535)
Q Consensus 361 NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~ 439 (535)
|||+++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus 167 Nili~~~~~~kl~D~g~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 167 NVLVTENNVMKIADFGLARDVNNIDYY---KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred eEEEcCCCcEEECCCccceeccccccc---ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999876543211 11122345678999999988889999999999999999998 77787543
Q ss_pred cccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCC
Q 009404 440 ITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513 (535)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~ 513 (535)
.... .... +..-. ....+..++..+.+++.+||+.+|++|||+.|+++.|.++..-
T Consensus 244 ~~~~---~~~~-----------~~~~~----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 244 PVEE---LFKL-----------LKEGH----RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred CHHH---HHHH-----------HHcCC----cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 2111 0000 00000 0111223345688999999999999999999999999988653
No 115
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=8.7e-39 Score=316.79 Aligned_cols=259 Identities=27% Similarity=0.410 Sum_probs=203.3
Q ss_pred HhcCCCCCcccceeCceEEEEEEEcC------CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeeccc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLTD------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG 296 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~~------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~ 296 (535)
..++|...+.||+|+||.||+|...+ +..||+|.+...........+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--- 80 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVST--- 80 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC---
Confidence 34578888999999999999998753 468999998765443444568899999999999999999999876
Q ss_pred CcceEEEEEecCCCCCHHHhhhhccc--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 009404 297 KRAMRLLVFEFMPNGNLRDCLDGVLV--------EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL 368 (535)
Q Consensus 297 ~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~ 368 (535)
....++||||+++|+|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||||+|||+++++
T Consensus 81 -~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~ 156 (277)
T cd05032 81 -GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDL 156 (277)
T ss_pred -CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCC
Confidence 3467999999999999999965321 23788999999999999999999998 99999999999999999
Q ss_pred cEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchh
Q 009404 369 NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESL 447 (535)
Q Consensus 369 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~ 447 (535)
.+||+|||+++........ .......++..|+|||.+..+.++.++||||||+++|||++ |..||....... .
T Consensus 157 ~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~ 230 (277)
T cd05032 157 TVKIGDFGMTRDIYETDYY---RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE---V 230 (277)
T ss_pred CEEECCcccchhhccCccc---ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH---H
Confidence 9999999999866543221 11223346788999999988889999999999999999998 888885432211 1
Q ss_pred hhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
..+. ...... ..+...+..+.+++.+||+.+|++|||+.|+++.|+.
T Consensus 231 ~~~~-----------~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 231 LKFV-----------IDGGHL----DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHHH-----------hcCCCC----CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 1100 000001 1122234568899999999999999999999998863
No 116
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.7e-38 Score=317.50 Aligned_cols=260 Identities=26% Similarity=0.404 Sum_probs=203.1
Q ss_pred cCCCCCcccceeCceEEEEEEEc------CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKR 298 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 298 (535)
.+|...+.||+|+||.||+++.. ++..+++|.+.... ......+.+|+++++.++|+||+++++++.. .
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~ 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-LAARKDFQREAELLTNLQHEHIVKFYGVCGD----G 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-HHHHHHHHHHHHHHhcCCCCCcceEEEEEcc----C
Confidence 34667789999999999999753 35579999986543 2333458899999999999999999999875 4
Q ss_pred ceEEEEEecCCCCCHHHhhhhcc--------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVL--------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl 364 (535)
...++||||+++++|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+|||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~ 156 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLV 156 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEE
Confidence 46799999999999999996532 134899999999999999999999998 9999999999999
Q ss_pred CCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccc
Q 009404 365 DENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKG 443 (535)
Q Consensus 365 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~ 443 (535)
++++.++|+|||++......... .......++..|+|||.+....++.++||||||+++|||++ |..||.......
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 233 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDYY---RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE 233 (291)
T ss_pred ccCCcEEECCCCcccccCCCcee---ecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999999999765433211 11223446788999999998999999999999999999999 999986433211
Q ss_pred cchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCC
Q 009404 444 EESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513 (535)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~ 513 (535)
..... ..-..+ ..+...+..+.+++.+||+.+|++|||+.+|++.|.++...
T Consensus 234 ---~~~~~-----------~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 234 ---VIECI-----------TQGRVL----ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred ---HHHHH-----------hCCCCC----CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 00000 000000 11122344588999999999999999999999999999654
No 117
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.6e-38 Score=312.15 Aligned_cols=257 Identities=29% Similarity=0.436 Sum_probs=205.4
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
...++|.+.+.||+|+||.||+|.+++++.||||.+.... .....+.+|+.+++.++|+||+++++++.. ....
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~ 76 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT--MSPEAFLQEAQIMKKLRHDKLVQLYAVCSE----EEPI 76 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc--cCHHHHHHHHHHHhhCCCCCEeeeeeeeec----CCce
Confidence 3456788899999999999999998888899999987543 234568999999999999999999998765 3467
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++++|.+++.......+++..+..++.|++.||.|||+++ ++|+||||+||++++++.++|+|||++...
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~ 153 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLI 153 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceec
Confidence 99999999999999998765556999999999999999999999998 999999999999999999999999998876
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
...... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... ......
T Consensus 154 ~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~~~~--------- 217 (261)
T cd05034 154 EDDEYT----AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR---EVLEQV--------- 217 (261)
T ss_pred cchhhh----hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH---------
Confidence 532211 1112234568999999998899999999999999999999 89998543211 111000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
... .....+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 218 --~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 218 --ERG----YRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --HcC----CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 000 0001122224558999999999999999999999999875
No 118
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.3e-38 Score=324.67 Aligned_cols=253 Identities=25% Similarity=0.320 Sum_probs=196.4
Q ss_pred CCCCCcccceeCceEEEEEEEc----CCcEEEEEEeccCC---CCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccC
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT----DGRIVAVKRFKTQG---GPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGK 297 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~----~g~~vaVK~l~~~~---~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 297 (535)
+|+..+.||+|+||.||+++.. +++.||+|++.... .....+.+..|++++..+ +|+||+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT---- 76 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec----
Confidence 4777899999999999999753 58899999986432 122234578899999999 69999999988765
Q ss_pred cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCC
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGl 377 (535)
....++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 77 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~ 151 (332)
T cd05614 77 EAKLHLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGL 151 (332)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcC
Confidence 44679999999999999998653 45899999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccccc
Q 009404 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 378 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
++....... .......||+.|+|||.+.+. .++.++||||||+++|||++|+.||.............. .
T Consensus 152 ~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~---~-- 222 (332)
T cd05614 152 SKEFLSEEK----ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR---R-- 222 (332)
T ss_pred CccccccCC----CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHH---H--
Confidence 986543221 122345789999999998765 478899999999999999999999964322211110000 0
Q ss_pred CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 009404 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQI 506 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 506 (535)
+.. .++ ..+...+..+.+++.+||+.||++|| ++++++++
T Consensus 223 -----~~~-~~~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 223 -----ILK-CDP----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred -----Hhc-CCC----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 000 011 22333445588999999999999999 78888864
No 119
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.8e-38 Score=316.91 Aligned_cols=260 Identities=28% Similarity=0.410 Sum_probs=203.3
Q ss_pred cCCCCCcccceeCceEEEEEEEc------CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKR 298 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 298 (535)
++|...+.||+|+||.||++... ++..+|+|.+.... ......+.+|++++++++||||+++++++.. .
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~ 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVE----G 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec----C
Confidence 56778899999999999999752 34669999887543 2334568999999999999999999999875 4
Q ss_pred ceEEEEEecCCCCCHHHhhhhcc-----------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVL-----------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN 367 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~ 367 (535)
...++||||+++++|.+++.... ...+++..+..++.|++.||+|||+++ ++||||||+|||++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~ 156 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGEN 156 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccC
Confidence 46799999999999999996432 124899999999999999999999998 9999999999999999
Q ss_pred CcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccch
Q 009404 368 LNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEES 446 (535)
Q Consensus 368 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~ 446 (535)
+.++|+|||++......... .......++..|+|||.+....++.++||||||+++|||++ |..||........
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~-- 231 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDYY---RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV-- 231 (288)
T ss_pred CcEEeccCCccccccCCcee---ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--
Confidence 99999999999865433211 11122345778999999998899999999999999999998 8888854332110
Q ss_pred hhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCC
Q 009404 447 LVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513 (535)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~ 513 (535)
... +........ +...+..+.+++.+||+.||.+|||+.|+++.|+.+...
T Consensus 232 -~~~-----------i~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 232 -IEC-----------ITQGRVLQR----PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred -HHH-----------HHcCCcCCC----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 000 000000011 112234589999999999999999999999999998754
No 120
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=308.15 Aligned_cols=270 Identities=24% Similarity=0.300 Sum_probs=221.6
Q ss_pred CHHHHHHHhcCCCCCcccceeCceEEEEEEEc------CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceee
Q 009404 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVG 289 (535)
Q Consensus 216 ~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g 289 (535)
...++..-..+++..-++-+|.||.||+|.|. +.+.|.||.++....+-....++.|.-++..+.|||++++.+
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 34566666778888889999999999999764 356799999998887777778999999999999999999999
Q ss_pred eeeecccCcceEEEEEecCCCCCHHHhhhh------cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 009404 290 YCSEFRGKRAMRLLVFEFMPNGNLRDCLDG------VLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNIL 363 (535)
Q Consensus 290 ~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NIL 363 (535)
++.+. ...++++|.++.-|+|..||.. ...+.++..+.+.++.|++.||+|||+++ ++|.||.++|++
T Consensus 355 V~ie~---~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCv 428 (563)
T KOG1024|consen 355 VSIED---YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCV 428 (563)
T ss_pred EEeec---cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcce
Confidence 99873 3467899999999999999972 22345788899999999999999999999 999999999999
Q ss_pred eCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCcccc
Q 009404 364 LDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITK 442 (535)
Q Consensus 364 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~ 442 (535)
||+..+|||+|-.+++.+.+.++..-+... ..+..||+||.+.+..|+..+|||||||+||||+| |+.|+..-.+.
T Consensus 429 Idd~LqVkltDsaLSRDLFP~DYhcLGDnE---nRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf 505 (563)
T KOG1024|consen 429 IDDQLQVKLTDSALSRDLFPGDYHCLGDNE---NRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF 505 (563)
T ss_pred ehhheeEEeccchhccccCcccccccCCCC---CCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH
Confidence 999999999999999998877765433333 34678999999999999999999999999999999 88888533221
Q ss_pred ccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCC
Q 009404 443 GEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAP 512 (535)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~ 512 (535)
+........ .+...|-++++++..+|..||...|++||+++|++.-|.++-.
T Consensus 506 -Em~~ylkdG-----------------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 506 -EMEHYLKDG-----------------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred -HHHHHHhcc-----------------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 222111111 1222355566779999999999999999999999999987643
No 121
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-38 Score=321.97 Aligned_cols=264 Identities=25% Similarity=0.411 Sum_probs=203.8
Q ss_pred HhcCCCCCcccceeCceEEEEEEEc--------CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeee
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLT--------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSE 293 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~--------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~ 293 (535)
..++|.+.+.||+|+||.||+++.. +...+|+|+++..........+..|+++++.+ +||||+++++++.+
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 3467788899999999999999752 24579999988654444445688999999999 69999999999875
Q ss_pred cccCcceEEEEEecCCCCCHHHhhhhcc--------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 009404 294 FRGKRAMRLLVFEFMPNGNLRDCLDGVL--------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKS 359 (535)
Q Consensus 294 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~ 359 (535)
....+++|||+++|+|.+++.... ...+++.++..++.|++.||.|||+++ ++||||||
T Consensus 90 ----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp 162 (314)
T cd05099 90 ----EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAA 162 (314)
T ss_pred ----CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccc
Confidence 346799999999999999996532 134889999999999999999999998 99999999
Q ss_pred CCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCC
Q 009404 360 SNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHR 438 (535)
Q Consensus 360 ~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~ 438 (535)
+|||+++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||..
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~ 239 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDYY---KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPG 239 (314)
T ss_pred eeEEEcCCCcEEEccccccccccccccc---cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999866432111 01111234467999999998899999999999999999999 8888854
Q ss_pred ccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCc
Q 009404 439 SITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514 (535)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~ 514 (535)
..... ..... ..-. ....+..++..+.+++.+||+.+|++|||+.|+++.|+++....
T Consensus 240 ~~~~~---~~~~~-----------~~~~----~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 240 IPVEE---LFKLL-----------REGH----RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred CCHHH---HHHHH-----------HcCC----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 32211 10000 0000 00112233445889999999999999999999999999886543
No 122
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.7e-38 Score=308.23 Aligned_cols=251 Identities=28% Similarity=0.337 Sum_probs=202.5
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||+|+||.||+++.. +++.|++|.+.... .......+.+|+++++.++||||+++++++.+ ....++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~l 76 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD----KGKLNI 76 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc----CCEEEE
Confidence 3667788999999999999875 58999999987542 23344568899999999999999999999876 456799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~ 153 (256)
T cd08529 77 VMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD 153 (256)
T ss_pred EEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccC
Confidence 999999999999998755567999999999999999999999998 99999999999999999999999999886654
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
... ......|++.|+|||++....++.++|+||||+++|||++|+.||...... ...... .
T Consensus 154 ~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~-----------~ 214 (256)
T cd08529 154 NTN-----FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG---ALILKI-----------I 214 (256)
T ss_pred ccc-----hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH-----------H
Confidence 321 123345788999999999989999999999999999999999999644311 100000 0
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+... ...+...+..+.+++.+||+.+|++||++.++++.
T Consensus 215 ~~~~----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 215 RGVF----PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred cCCC----CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 0000 11222344568999999999999999999999874
No 123
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.9e-38 Score=310.40 Aligned_cols=260 Identities=25% Similarity=0.397 Sum_probs=200.8
Q ss_pred CCCCcccceeCceEEEEEEEcC----CcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeeccc--Ccc
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTD----GRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG--KRA 299 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~----g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~--~~~ 299 (535)
|...+.||+|+||.||+|.+.. +..||+|+++..... .....+.+|++.++.++||||+++++++.+... ...
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567889999999999998743 367999999764322 223458899999999999999999998865332 223
Q ss_pred eEEEEEecCCCCCHHHhhhhc----ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEec
Q 009404 300 MRLLVFEFMPNGNLRDCLDGV----LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDL 375 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DF 375 (535)
..+++|||+++|+|..++... ....+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 469999999999999998543 2235899999999999999999999998 999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhcccc
Q 009404 376 GMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454 (535)
Q Consensus 376 Gla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~ 454 (535)
|+++......... ......++..|+|||.+....++.++||||||+++|||++ |..||...... ....+..
T Consensus 158 g~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~---~~~~~~~-- 229 (273)
T cd05035 158 GLSKKIYSGDYYR---QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH---EIYDYLR-- 229 (273)
T ss_pred cceeecccccccc---ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHH--
Confidence 9998765432211 1112234678999999988899999999999999999999 88888542211 1111000
Q ss_pred ccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 455 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
.-... ..+...+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 230 ---------~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 ---------HGNRL----KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ---------cCCCC----CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00001 12233445689999999999999999999999999876
No 124
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.2e-39 Score=330.49 Aligned_cols=256 Identities=24% Similarity=0.327 Sum_probs=201.7
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|...+.||+|+||+||+|+.. +++.||||+++... .......+.+|++++..++||||+++++++.+ ....
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----~~~~ 76 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD----EEHL 76 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec----CCeE
Confidence 36888899999999999999976 58999999997532 12334558899999999999999999988875 4577
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||||+.++.+||+|||++...
T Consensus 77 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~ 151 (350)
T cd05573 77 YLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKM 151 (350)
T ss_pred EEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccC
Confidence 9999999999999999764 56899999999999999999999998 999999999999999999999999999866
Q ss_pred ccCCC------------------------CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCC
Q 009404 382 KADGL------------------------PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437 (535)
Q Consensus 382 ~~~~~------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~ 437 (535)
..... ...........||+.|+|||.+.+..++.++|||||||++|||++|+.||.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~ 231 (350)
T cd05573 152 NKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFY 231 (350)
T ss_pred cccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCC
Confidence 54320 000012234568999999999999999999999999999999999999996
Q ss_pred Cccccccch-hhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHH
Q 009404 438 RSITKGEES-LVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT-MSEVVQI 506 (535)
Q Consensus 438 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~evl~~ 506 (535)
......... ...|. ..+..+. ....+..+.+++.+||. ||.+||+ +.|++++
T Consensus 232 ~~~~~~~~~~i~~~~-----------~~~~~p~-----~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 232 SDTLQETYNKIINWK-----------ESLRFPP-----DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCCHHHHHHHHhccC-----------CcccCCC-----CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 543211100 00000 0000010 01134558889999997 9999999 9999985
No 125
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.8e-38 Score=314.30 Aligned_cols=247 Identities=26% Similarity=0.362 Sum_probs=193.3
Q ss_pred cceeCceEEEEEEEc-CCcEEEEEEeccCCCC--ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCC
Q 009404 233 VGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP--NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMP 309 (535)
Q Consensus 233 LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~ 309 (535)
||+|+||+||++... +++.||+|.+...... ...+.+..|+++++.++|+||+++.+++.. ....++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~----~~~~~lv~e~~~ 76 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT----KTDLCLVMTIMN 76 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC----CCeEEEEEeCCC
Confidence 699999999999875 5889999998754221 122457789999999999999999988765 446799999999
Q ss_pred CCCHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCC
Q 009404 310 NGNLRDCLDGV--LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP 387 (535)
Q Consensus 310 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~ 387 (535)
+|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 77 ~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~-- 151 (280)
T cd05608 77 GGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ-- 151 (280)
T ss_pred CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCC--
Confidence 99999887542 2245899999999999999999999998 9999999999999999999999999997664332
Q ss_pred CCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCC
Q 009404 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD 467 (535)
Q Consensus 388 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (535)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||............ ...+..
T Consensus 152 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~-------------~~~~~~ 215 (280)
T cd05608 152 ---SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL-------------KQRILN 215 (280)
T ss_pred ---ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHH-------------HHhhcc
Confidence 1223456899999999999999999999999999999999999999643221110000 000111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 009404 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQI 506 (535)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 506 (535)
.. ...+...+..+.+++.+||+.||++|| ++++++++
T Consensus 216 ~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 216 DS--VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred cC--CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 10 122333455688999999999999999 77888864
No 126
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.4e-38 Score=318.71 Aligned_cols=265 Identities=23% Similarity=0.350 Sum_probs=199.9
Q ss_pred hcCCCCCcccceeCceEEEEEEEcC---------------CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCcccee
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTD---------------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLV 288 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~---------------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~ 288 (535)
.++|...+.||+|+||.||+++..+ ...||+|+++..........|.+|+++++.++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3578888999999999999987642 2358999998654444455689999999999999999999
Q ss_pred eeeeecccCcceEEEEEecCCCCCHHHhhhhccc----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 009404 289 GYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLV----------EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIK 358 (535)
Q Consensus 289 g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~----------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk 358 (535)
+++.. ....++||||+++++|.+++..... ..+++..++.++.|++.||+|||+.+ ++|+|||
T Consensus 84 ~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlk 156 (295)
T cd05097 84 GVCVS----DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLA 156 (295)
T ss_pred EEEcC----CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccC
Confidence 99875 4467999999999999999864311 13688999999999999999999998 9999999
Q ss_pred CCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh--CCCCC
Q 009404 359 SSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT--GRQPI 436 (535)
Q Consensus 359 ~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt--G~~P~ 436 (535)
|+||++++++.+||+|||++......... .......++..|+|||.+..+.++.++||||||+++|||++ |..||
T Consensus 157 p~Nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~ 233 (295)
T cd05097 157 TRNCLVGNHYTIKIADFGMSRNLYSGDYY---RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPY 233 (295)
T ss_pred hhhEEEcCCCcEEecccccccccccCcce---eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999765433211 11222345678999999998899999999999999999998 56677
Q ss_pred CCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 437 HRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
.......... . ......... .......+...+..+.+|+.+||+.||++||++.+|++.|.+
T Consensus 234 ~~~~~~~~~~--~-~~~~~~~~~--------~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 234 SLLSDEQVIE--N-TGEFFRNQG--------RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred cccChHHHHH--H-HHHhhhhcc--------ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 5432211000 0 000000000 000001111223469999999999999999999999999863
No 127
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.1e-38 Score=329.61 Aligned_cols=262 Identities=21% Similarity=0.256 Sum_probs=195.3
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
..+|+..+.||+|+||.||++... +++.||+|.... ..+.+|+++++.++||||+++++++.. ....+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-------~~~~~E~~il~~l~HpnIv~~~~~~~~----~~~~~ 159 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-------GGTATEAHILRAINHPSIIQLKGTFTY----NKFTC 159 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-------hhhHHHHHHHHhCCCCCCCCEeEEEEE----CCeeE
Confidence 367999999999999999999875 488999997542 236799999999999999999999876 44679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+|+|++. ++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 160 lv~e~~~-~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~ 233 (391)
T PHA03212 160 LILPRYK-TDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPV 233 (391)
T ss_pred EEEecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccc
Confidence 9999994 7899888653 45899999999999999999999998 9999999999999999999999999997543
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCcccccc-----chhh--hh-ccc-
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGE-----ESLV--LW-ATP- 453 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~-----~~~~--~~-~~~- 453 (535)
... ........||+.|+|||++....++.++|||||||++|||++|+.||........ ..+. .. ...
T Consensus 234 ~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~ 309 (391)
T PHA03212 234 DIN----ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTH 309 (391)
T ss_pred ccc----ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCC
Confidence 211 1122345799999999999988999999999999999999999988754321100 0000 00 000
Q ss_pred --ccc-Cccccccc---------CCCCCCCCCC--CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 454 --RLQ-DSGTVISE---------LPDPRLKGDF--PKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 454 --~~~-~~~~~~~~---------~~~~~l~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
... .....+.+ ...+...... ....+..+.+|+.+||+.||++|||+.|+++.
T Consensus 310 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 310 PNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred hhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000 00000000 0000000000 01234568899999999999999999999964
No 128
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3.2e-38 Score=311.32 Aligned_cols=260 Identities=25% Similarity=0.427 Sum_probs=202.6
Q ss_pred hcCCCCCcccceeCceEEEEEEEcC-C---cEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTD-G---RIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~-g---~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
.++|+..+.||+|+||.||+|++.. + ..+|+|.++..........+..|+++++.++|||++++.+++.. ..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~ 79 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK----FK 79 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc----CC
Confidence 3467778999999999999998753 3 37999998765444445568999999999999999999999876 34
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||++.
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~ 155 (268)
T cd05063 80 PAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSR 155 (268)
T ss_pred CcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccce
Confidence 5699999999999999997532 45899999999999999999999998 9999999999999999999999999987
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDS 458 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
........ .........+..|+|||++....++.++||||||+++|||++ |+.||...... .....
T Consensus 156 ~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~---~~~~~-------- 222 (268)
T cd05063 156 VLEDDPEG--TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH---EVMKA-------- 222 (268)
T ss_pred eccccccc--ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH---HHHHH--------
Confidence 66432211 111111223467999999988889999999999999999998 99998543221 11000
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
+... .....+...+..+.+++.+||+.+|++||++.+|++.|.++.
T Consensus 223 ---i~~~----~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 223 ---INDG----FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred ---HhcC----CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 0000 011112223455889999999999999999999999998763
No 129
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=7.2e-39 Score=330.70 Aligned_cols=256 Identities=22% Similarity=0.311 Sum_probs=197.6
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||+||+++.. +++.||||++.... .......+.+|++++..++||||+++++++.+ ....
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~----~~~~ 76 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD----ENYL 76 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc----CCeE
Confidence 46888899999999999999976 48999999997532 12233457889999999999999999999876 4577
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.++|+|||++..+
T Consensus 77 ~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 151 (364)
T cd05599 77 YLIMEYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGL 151 (364)
T ss_pred EEEECCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceec
Confidence 9999999999999999753 45899999999999999999999998 999999999999999999999999998765
Q ss_pred ccCCCCCCC---------------------------------CCCCccccCccccCccccccCCCCccchHHHHHHHHHH
Q 009404 382 KADGLPSCS---------------------------------SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLE 428 (535)
Q Consensus 382 ~~~~~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~e 428 (535)
......... .......||+.|+|||++....++.++|||||||++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 231 (364)
T cd05599 152 KKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYE 231 (364)
T ss_pred cccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHH
Confidence 322110000 00112468999999999998899999999999999999
Q ss_pred HHhCCCCCCCccccccch-hhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC---HHHHH
Q 009404 429 LITGRQPIHRSITKGEES-LVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT---MSEVV 504 (535)
Q Consensus 429 LltG~~P~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~evl 504 (535)
|++|..||.......... ...|. ..+..+ .....+..+.+++.+|+. +|.+|++ +.|++
T Consensus 232 l~~G~~Pf~~~~~~~~~~~i~~~~-----------~~~~~~-----~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll 294 (364)
T cd05599 232 MLVGYPPFCSDNPQETYRKIINWK-----------ETLQFP-----DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIK 294 (364)
T ss_pred hhcCCCCCCCCCHHHHHHHHHcCC-----------CccCCC-----CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHh
Confidence 999999996543221100 00000 000000 011223457889999986 9999998 99988
Q ss_pred HH
Q 009404 505 QI 506 (535)
Q Consensus 505 ~~ 506 (535)
++
T Consensus 295 ~h 296 (364)
T cd05599 295 SH 296 (364)
T ss_pred cC
Confidence 74
No 130
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.5e-38 Score=310.66 Aligned_cols=254 Identities=28% Similarity=0.404 Sum_probs=191.3
Q ss_pred cccceeCceEEEEEEEcC---CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEec
Q 009404 231 NIVGQGGSSYVYRGQLTD---GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~---g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
+.||+|+||.||+|.+.+ +..+|+|.++..........+.+|+.+++.++||||+++++++.+ ....++||||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~ 76 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE----VTPYLLVMEF 76 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC----CCCcEEEEEC
Confidence 358999999999998653 457999998766544444568899999999999999999998876 3356999999
Q ss_pred CCCCCHHHhhhhccc---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 308 MPNGNLRDCLDGVLV---EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 308 ~~~gsL~~~l~~~~~---~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
+++|+|.+++..... ...++..+..++.|++.||+|||+.+ ++|+||||+||+++.++++||+|||++......
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~ 153 (269)
T cd05087 77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE 153 (269)
T ss_pred CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCc
Confidence 999999999965321 24677888899999999999999998 999999999999999999999999998754432
Q ss_pred CCCCCCCCCCccccCccccCccccccC-------CCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhcccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVG-------RASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
... .......++..|+|||++... .++.++||||||+++|||++ |+.||........ ..+.. .
T Consensus 154 ~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~---~~~~~---~ 224 (269)
T cd05087 154 DYY---VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV---LTYTV---R 224 (269)
T ss_pred cee---ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH---HHHHh---h
Confidence 211 112234567889999988632 35789999999999999996 9999964332211 00000 0
Q ss_pred CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
........+.+.... ...+.+++..|| .+|++|||++||+..|+
T Consensus 225 ---~~~~~~~~~~~~~~~----~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 225 ---EQQLKLPKPRLKLPL----SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ---cccCCCCCCccCCCC----ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 001112222222222 234778999999 58999999999998875
No 131
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.5e-38 Score=323.08 Aligned_cols=246 Identities=22% Similarity=0.318 Sum_probs=192.2
Q ss_pred CCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHH---hccCCCCccceeeeeeecccCcce
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDML---SRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l---~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
|.+.+.||+|+||.||+|.+. +++.||||+++... .....+.+.+|++++ +.++||||+++++++.+ ...
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~----~~~ 76 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT----EDH 76 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc----CCE
Confidence 456788999999999999875 48999999997432 122233466666554 56789999999999876 457
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++||||+++++|..++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++..
T Consensus 77 ~~lv~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~ 150 (324)
T cd05589 77 VCFVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKE 150 (324)
T ss_pred EEEEEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCcc
Confidence 7999999999999988864 46899999999999999999999998 99999999999999999999999999875
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
.... ........|++.|+|||.+.+..++.++||||||+++|||++|+.||..........
T Consensus 151 ~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~-------------- 211 (324)
T cd05589 151 GMGF-----GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFD-------------- 211 (324)
T ss_pred CCCC-----CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHH--------------
Confidence 4321 112334578999999999999899999999999999999999999996432211000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQI 506 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 506 (535)
.+.... ..+|...+..+.+++.+||+.||++|| ++.++++.
T Consensus 212 ---~i~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 212 ---SIVNDE--VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred ---HHHhCC--CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 000000 012233345588999999999999999 57777764
No 132
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=7.4e-39 Score=331.15 Aligned_cols=255 Identities=22% Similarity=0.298 Sum_probs=199.1
Q ss_pred HHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccC
Q 009404 221 EHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGK 297 (535)
Q Consensus 221 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 297 (535)
+...++|+..+.||+|+||.||+++.. +++.||+|++.... .......+.+|+.+++.++||||+++++++.+
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~---- 114 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD---- 114 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec----
Confidence 344578899999999999999999875 48899999996431 12223347789999999999999999988875
Q ss_pred cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCC
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGl 377 (535)
....++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~ 188 (370)
T cd05596 115 DKYLYMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT 188 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccc
Confidence 4578999999999999999865 34788889999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCccccCccccCccccccC----CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccc
Q 009404 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG----RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453 (535)
Q Consensus 378 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~ 453 (535)
+........ .......||+.|+|||.+... .++.++|||||||++|||++|+.||..........
T Consensus 189 ~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~------- 257 (370)
T cd05596 189 CMKMDANGM----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS------- 257 (370)
T ss_pred eeeccCCCc----ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHH-------
Confidence 986643321 112345689999999988643 47899999999999999999999996432211000
Q ss_pred cccCcccccccCCCCCCCCCCC--HHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 009404 454 RLQDSGTVISELPDPRLKGDFP--KEEMQIMAYLAKECLQLDPDA--RPTMSEVVQI 506 (535)
Q Consensus 454 ~~~~~~~~~~~~~~~~l~~~~~--~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~ 506 (535)
.+........+| ...+..+.+++.+||+.+|++ |+++.|++++
T Consensus 258 ----------~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 258 ----------KIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred ----------HHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 000000000111 123456888999999999988 9999999875
No 133
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=7.2e-39 Score=325.54 Aligned_cols=243 Identities=26% Similarity=0.325 Sum_probs=193.4
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEec
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
+.||+|+||.||++... +++.||+|++.... .......+.+|+++++.++||||+++++++.. ....++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~----~~~~~lv~E~ 76 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT----HDRLCFVMEY 76 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc----CCEEEEEEeC
Confidence 36999999999999864 58999999997542 12223457789999999999999999998876 4567999999
Q ss_pred CCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHE-AAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 308 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
+++|+|.+++... ..+++..+..++.|++.||+|||+ .+ |+||||||+|||+++++.+||+|||+++......
T Consensus 77 ~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~- 150 (325)
T cd05594 77 ANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG- 150 (325)
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-
Confidence 9999999988653 458999999999999999999997 67 9999999999999999999999999987543221
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||............. ..
T Consensus 151 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~---------------~~ 211 (325)
T cd05594 151 ----ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL---------------ME 211 (325)
T ss_pred ----cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh---------------cC
Confidence 12234568999999999998999999999999999999999999996432211100000 00
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQI 506 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 506 (535)
.. .+|...+..+.+++.+||+.||++|+ ++.+++++
T Consensus 212 ~~----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 212 EI----RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CC----CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 01 12223345588999999999999996 89999875
No 134
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.5e-38 Score=311.14 Aligned_cols=258 Identities=25% Similarity=0.395 Sum_probs=202.3
Q ss_pred cCCCCCcccceeCceEEEEEEEc----CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT----DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
.+|...+.||+|+||.||+|++. .+..+|+|.++..........+..|+.+++.++||||+++++++.. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~ 79 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK----SKP 79 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec----CCc
Confidence 45777899999999999999864 2347999998765444445568999999999999999999999865 346
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++||||+++++|.+++.... ..+++.++..++.|++.||+|||+.+ ++||||||+|||+++++.++|+|||++..
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd05066 80 VMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRV 155 (267)
T ss_pred cEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCcccc
Confidence 799999999999999997643 45899999999999999999999998 99999999999999999999999999987
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
....... ........++..|+|||++....++.++||||||+++||+++ |..||....... .....
T Consensus 156 ~~~~~~~--~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~~~-------- 222 (267)
T cd05066 156 LEDDPEA--AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIKAI-------- 222 (267)
T ss_pred cccccce--eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHHHH--------
Confidence 6543211 111122233568999999998899999999999999999887 999986433211 11100
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
.+.... ..+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 223 ---~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 223 ---EEGYRL----PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ---hCCCcC----CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 000000 11222345588999999999999999999999999875
No 135
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.4e-38 Score=308.16 Aligned_cols=250 Identities=30% Similarity=0.459 Sum_probs=202.5
Q ss_pred cCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
++|+..+.||.|+||.||+|... ++.||+|.+..... ....+.+|+.+++.++|+||+++++++.+ ....++|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~v 78 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQ----GNPLYIV 78 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcC----CCCeEEE
Confidence 46777899999999999999875 78899999986543 44568999999999999999999999875 3467999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||.++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 99999999999997755456999999999999999999999998 999999999999999999999999999876322
Q ss_pred CCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
. .....+..|+|||++..+.++.++||||||+++|||++ |..||....... ..... .
T Consensus 156 ~--------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~-----------~ 213 (256)
T cd05039 156 Q--------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPHV-----------E 213 (256)
T ss_pred c--------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHH-----------h
Confidence 1 12234567999999988889999999999999999997 999985432111 10000 0
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
. ......+...+..+.+++.+||..+|++|||+.|++++|+.+
T Consensus 214 ~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 214 K----GYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred c----CCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0 001111223345688999999999999999999999999764
No 136
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.2e-38 Score=308.43 Aligned_cols=250 Identities=28% Similarity=0.423 Sum_probs=199.6
Q ss_pred cCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
.+|...+.||+|+||.||++... +..||+|.++... ..+.+.+|+.+++.++|+|++++++++... ....+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~lv 78 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEE---KGGLYIV 78 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCeeeEEEEEEcC---CCceEEE
Confidence 46777899999999999999875 7889999986532 234588999999999999999999986542 3356999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+++++|.+++.......+++..+..++.|++.||+|||+++ ++||||||+||++++++.+||+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999999997655455899999999999999999999998 999999999999999999999999998765432
Q ss_pred CCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
. ....++..|+|||++....++.++||||||+++|||++ |+.||...... ...... .
T Consensus 156 ~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~---~~~~~~-----------~ 213 (256)
T cd05082 156 Q--------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPRV-----------E 213 (256)
T ss_pred C--------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH-----------h
Confidence 1 12234567999999988889999999999999999998 89888532211 111000 0
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
.. .....+...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 214 ~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 214 KG----YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred cC----CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 00 01112223345688999999999999999999999999864
No 137
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.6e-38 Score=339.73 Aligned_cols=264 Identities=24% Similarity=0.280 Sum_probs=205.6
Q ss_pred HHHHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeeccc
Q 009404 219 ALEHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG 296 (535)
Q Consensus 219 ~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~ 296 (535)
+.+...++|...+.||+|+||+||+++.. +++.||||++..... ......+.+|+..+..++|+||+++...+.....
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 34455678999999999999999999864 589999999975432 2333457889999999999999998877654321
Q ss_pred ----CcceEEEEEecCCCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcE
Q 009404 297 ----KRAMRLLVFEFMPNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNA 370 (535)
Q Consensus 297 ----~~~~~~lV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~v 370 (535)
.....++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~v 182 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLV 182 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCE
Confidence 1124689999999999999996532 345899999999999999999999998 9999999999999999999
Q ss_pred EEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhh
Q 009404 371 KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450 (535)
Q Consensus 371 kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~ 450 (535)
||+|||+++....... ........||+.|+|||.+....++.++||||||+++|||++|+.||....... ....
T Consensus 183 kL~DFGls~~~~~~~~---~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~---~~~~ 256 (496)
T PTZ00283 183 KLGDFGFSKMYAATVS---DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE---VMHK 256 (496)
T ss_pred EEEecccCeecccccc---ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH---HHHH
Confidence 9999999987643211 112234578999999999999999999999999999999999999996432110 0000
Q ss_pred ccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 451 ATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
. .... . ...+...+..+.+++.+||+.||++||++.+++++
T Consensus 257 ---~-------~~~~-~----~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 257 ---T-------LAGR-Y----DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ---H-------hcCC-C----CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 0 0000 0 11233344568999999999999999999999864
No 138
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.4e-38 Score=308.82 Aligned_cols=251 Identities=23% Similarity=0.290 Sum_probs=201.9
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
+|+..+.||+|+||.||+++.. +++.+|+|.++........+.+.+|+.+++.++|+||+++++++.+ ....+++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv 76 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEA----DGHLYIV 76 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEE----CCEEEEE
Confidence 4677889999999999999875 4889999998754444445568889999999999999999998876 4577999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+++++|.+++.......+++.....++.|++.||.|||+.+ |+|+||||+||++++++.++|+|||++......
T Consensus 77 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 153 (255)
T cd08219 77 MEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153 (255)
T ss_pred EeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence 99999999999987655556899999999999999999999998 999999999999999999999999999766432
Q ss_pred CCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (535)
.. ......|++.|+|||.+....++.++|+||||+++|+|++|..||.......... . +..
T Consensus 154 ~~-----~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~--~------------~~~ 214 (255)
T cd08219 154 GA-----YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLIL--K------------VCQ 214 (255)
T ss_pred cc-----ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHH--H------------Hhc
Confidence 21 1233568889999999988889999999999999999999999996432211000 0 000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 465 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.. ....+...+..+.+++.+||+.||++|||+.|++..
T Consensus 215 ~~----~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 215 GS----YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CC----CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 00 001222334558899999999999999999999864
No 139
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.7e-38 Score=312.92 Aligned_cols=246 Identities=24% Similarity=0.343 Sum_probs=191.3
Q ss_pred cceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCC
Q 009404 233 VGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMP 309 (535)
Q Consensus 233 LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~ 309 (535)
||+|+||.||+++.. +|+.+|+|.+..... ......+..|+++++.++||||+++.+++.+ ....++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~----~~~~~lv~e~~~ 76 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES----KTHLCLVMSLMN 76 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec----CCeEEEEEecCC
Confidence 699999999999875 489999999864321 1223345679999999999999999988865 456799999999
Q ss_pred CCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCC
Q 009404 310 NGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSC 389 (535)
Q Consensus 310 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 389 (535)
+++|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.++|+|||++.......
T Consensus 77 g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---- 149 (277)
T cd05607 77 GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---- 149 (277)
T ss_pred CCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc----
Confidence 999999887655556899999999999999999999998 9999999999999999999999999987664321
Q ss_pred CCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCC
Q 009404 390 SSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469 (535)
Q Consensus 390 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (535)
......|+..|+|||++....++.++|||||||++|||++|+.||............. .......
T Consensus 150 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~-------------~~~~~~~ 214 (277)
T cd05607 150 --TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELK-------------RRTLEDE 214 (277)
T ss_pred --eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHH-------------HHhhccc
Confidence 1223468899999999998889999999999999999999999986432211110000 0000000
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
... .....+..+.+++.+||+.||++||++.|+++
T Consensus 215 ~~~-~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 215 VKF-EHQNFTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred ccc-ccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 000 01123445889999999999999999977654
No 140
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.2e-38 Score=311.59 Aligned_cols=259 Identities=26% Similarity=0.406 Sum_probs=200.0
Q ss_pred CCCCCcccceeCceEEEEEEEcC-C---cEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTD-G---RIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~-g---~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
.|...+.||+|+||.||+|.+.. + ..||||.+...........|..|+.+++.++||||+++++++.+ ....
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~----~~~~ 80 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK----SRPV 80 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC----CCce
Confidence 35667899999999999998753 3 36999998765444445679999999999999999999998865 4467
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 81 MIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCcccccc
Confidence 99999999999999997542 45899999999999999999999998 999999999999999999999999998765
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
.................+..|+|||++....++.++||||||+++||+++ |..||...... ....+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i~-------- 225 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAIE-------- 225 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHHH--------
Confidence 43221100000111112457999999998999999999999999999887 99998643221 1111100
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
.. .....+.+.+..+.+++.+||+.+|++||++.+++..|+.+
T Consensus 226 ---~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 226 ---QD----YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---cC----CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 00111223345588999999999999999999999999875
No 141
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=8.4e-38 Score=307.16 Aligned_cols=255 Identities=23% Similarity=0.366 Sum_probs=201.1
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC----ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP----NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
++|...+.||+|++|.||++... +++.||+|.+...... .....+.+|++++++++||||+++++++.+ ..
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~ 77 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD----DE 77 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc----CC
Confidence 56888999999999999999864 5899999998744221 122357889999999999999999999876 34
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..++|+||+++++|.+++... ..+++.....++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.
T Consensus 78 ~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~ 152 (263)
T cd06625 78 TLSIFMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASK 152 (263)
T ss_pred eEEEEEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccce
Confidence 789999999999999998754 45889999999999999999999998 9999999999999999999999999987
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
........ ........++..|+|||.+.+..++.++||||||+++|||++|+.||........ ..
T Consensus 153 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~---------- 217 (263)
T cd06625 153 RLQTICSS--GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA---IF---------- 217 (263)
T ss_pred eccccccc--cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH---HH----------
Confidence 65432110 1111234577899999999988899999999999999999999999854321110 00
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
...........+......+.+++.+||..+|++|||+.|+++..
T Consensus 218 ----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 218 ----KIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred ----HHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 00001111123334455688999999999999999999998753
No 142
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.7e-38 Score=315.44 Aligned_cols=258 Identities=25% Similarity=0.418 Sum_probs=201.7
Q ss_pred hcCCCCCcccceeCceEEEEEEEc------CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccC
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGK 297 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 297 (535)
.++|+..+.||+|+||.||++... ++..||+|++...........+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~---- 79 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAV---- 79 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC----
Confidence 467888999999999999999863 4678999999765444445568899999999999999999998875
Q ss_pred cceEEEEEecCCCCCHHHhhhhcc--------------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVL--------------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDI 357 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DL 357 (535)
....++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl 156 (288)
T cd05050 80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDL 156 (288)
T ss_pred CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccc
Confidence 345699999999999999996431 123788899999999999999999998 999999
Q ss_pred CCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCC
Q 009404 358 KSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPI 436 (535)
Q Consensus 358 k~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~ 436 (535)
||+|||+++++.++|+|||++......... ........+..|+|||.+....++.++||||||+++|||++ |..||
T Consensus 157 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~ 233 (288)
T cd05050 157 ATRNCLVGENMVVKIADFGLSRNIYSADYY---KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPY 233 (288)
T ss_pred cHhheEecCCCceEECccccceecccCccc---cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999998765433211 11112234567999999988899999999999999999998 88888
Q ss_pred CCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 437 HRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
....... ... .+.+... ...+...+..+.+++.+||+.+|++|||+.|+++.|++
T Consensus 234 ~~~~~~~---~~~--------------~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 234 YGMAHEE---VIY--------------YVRDGNV-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CCCCHHH---HHH--------------HHhcCCC-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 5432211 000 0000000 01122334568999999999999999999999999874
No 143
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.7e-38 Score=322.05 Aligned_cols=243 Identities=23% Similarity=0.314 Sum_probs=191.7
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|+||.||+|+.. +++.||||++.... .......+..|..++..+ +||||+++++++.. ....++|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~----~~~~~iv~E 76 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT----PDRLFFVME 76 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc----CCEEEEEEc
Confidence 36999999999999976 48899999987432 223334577888888876 79999999998876 446799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 77 y~~~g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~- 150 (320)
T cd05590 77 FVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG- 150 (320)
T ss_pred CCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-
Confidence 99999999998754 45899999999999999999999998 9999999999999999999999999987543221
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ .. .+.
T Consensus 151 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~---~~--------------~i~ 209 (320)
T cd05590 151 ----KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL---FE--------------AIL 209 (320)
T ss_pred ----CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH---HH--------------HHh
Confidence 123345789999999999988999999999999999999999999964332110 00 000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM------SEVVQI 506 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~------~evl~~ 506 (535)
... ...+...+..+.+++.+||+.||++||++ ++++++
T Consensus 210 ~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 210 NDE--VVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred cCC--CCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 000 01122234558899999999999999998 666653
No 144
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=5.9e-38 Score=312.21 Aligned_cols=275 Identities=27% Similarity=0.349 Sum_probs=200.8
Q ss_pred cCCCCCcccceeCceEEEEEEEc-----CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-----DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-----~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
..|...+.||+|+||.||++... +++.||+|.+.... ......+.+|+++++.++||||+++++++.... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG--RR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCC--CC
Confidence 35677889999999999999753 47899999987543 233446889999999999999999999876432 33
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++.
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~ 156 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTK 156 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccc
Confidence 5789999999999999996532 35899999999999999999999998 9999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
......... .......++..|+|||.+.+..++.++||||||+++|||++|..|+............ .........
T Consensus 157 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 232 (284)
T cd05081 157 VLPQDKEYY--KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMG--NDKQGQMIV 232 (284)
T ss_pred cccCCCcce--eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcc--cccccccch
Confidence 765432110 0111122345699999998889999999999999999999987765332111000000 000000000
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
..+.+..........+...+..+.+++.+||+.+|++|||+.||++.|+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 233 YHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 000000000111112233445689999999999999999999999999875
No 145
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.7e-38 Score=321.84 Aligned_cols=250 Identities=22% Similarity=0.307 Sum_probs=193.7
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
++||+|+||.||+++.. +++.||||+++.... ......+.+|..++..+ +||||+++++++.+ ....++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~----~~~~~lv~e 76 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT----ESRLFFVIE 76 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc----CCEEEEEEe
Confidence 36999999999999875 488999999975421 22234478899999988 79999999999876 456799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 77 ~~~~g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-- 149 (329)
T cd05588 77 FVSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-- 149 (329)
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccC--
Confidence 99999999988653 56999999999999999999999998 999999999999999999999999998753221
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccc--cchhhhhccccccCccccccc
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKG--EESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 464 (535)
........||+.|+|||++.+..++.++||||||+++|||++|+.||....... ......+. ...
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~----------~~~ 216 (329)
T cd05588 150 ---GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYL----------FQV 216 (329)
T ss_pred ---CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHH----------HHH
Confidence 112334578999999999999999999999999999999999999996432111 00000000 000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHH
Q 009404 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT------MSEVVQI 506 (535)
Q Consensus 465 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt------~~evl~~ 506 (535)
+.... ...|...+..+.+++.+||+.||.+||+ +.+++++
T Consensus 217 ~~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 217 ILEKQ--IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHcCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 01111 1123334455889999999999999997 6777754
No 146
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=7e-38 Score=307.07 Aligned_cols=251 Identities=27% Similarity=0.386 Sum_probs=197.7
Q ss_pred cccceeCceEEEEEEEcC----CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLTD----GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~----g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
++||+|+||.||+|++.. +..+|+|.+...........+.+|+++++.+.|+||+++++++.. ...++|||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~v~e 75 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-----EPLMLVME 75 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-----CceEEEEE
Confidence 469999999999997532 368999999866544445568999999999999999999998652 24699999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||||+|||+++++.+||+|||+++.......
T Consensus 76 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~ 150 (257)
T cd05060 76 LAPLGPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD 150 (257)
T ss_pred eCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCc
Confidence 99999999999764 36899999999999999999999998 99999999999999999999999999987654321
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccccC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISEL 465 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
.. .......++..|+|||.+....++.++||||||+++|||++ |..||...... ....+.. ..
T Consensus 151 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~---~~~~~~~-----------~~ 214 (257)
T cd05060 151 YY--RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA---EVIAMLE-----------SG 214 (257)
T ss_pred cc--ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHHH-----------cC
Confidence 11 11112234567999999998899999999999999999998 89998643221 1111110 00
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 466 PDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 466 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
.. ...+...+..+.+++.+||..+|++||++.++++.|+.+.
T Consensus 215 ~~----~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 215 ER----LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred Cc----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 00 0122233456889999999999999999999999998764
No 147
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8.1e-38 Score=308.29 Aligned_cols=254 Identities=26% Similarity=0.397 Sum_probs=198.7
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
++|+..+.||+|+||.||+|+.. +++.||+|++..... .....+.+|+.+++.++||||+++++++.. ....++
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~----~~~~~i 83 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-DDFSLIQQEIFMVKECKHCNIVAYFGSYLS----REKLWI 83 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-chHHHHHHHHHHHHhcCCCCeeeeeEEEEe----CCEEEE
Confidence 46888899999999999999974 588999999975432 233457889999999999999999999876 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||+|+||++++++.++|+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 84 CMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred EEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 99999999999998653 45899999999999999999999998 99999999999999999999999999986643
Q ss_pred CCCCCCCCCCCccccCccccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAM---VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
.. .......|+..|+|||.+. ...++.++||||||+++|||++|+.||......... .....
T Consensus 159 ~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~--~~~~~-------- 223 (267)
T cd06646 159 TI-----AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL--FLMSK-------- 223 (267)
T ss_pred cc-----cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh--eeeec--------
Confidence 21 1123346788999999874 445788999999999999999999998543221110 00000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
.....+... .....+..+.+++.+||+.+|++|||++++++.|
T Consensus 224 --~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 224 --SNFQPPKLK--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred --CCCCCCCCc--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 001111111 1112345688999999999999999999998764
No 148
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.4e-38 Score=314.97 Aligned_cols=265 Identities=27% Similarity=0.411 Sum_probs=203.0
Q ss_pred hcCCCCCcccceeCceEEEEEEEcC-----------------CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccc
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTD-----------------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~-----------------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~ 286 (535)
..+|+..+.||+|+||.||++.+.+ +..||+|++...........+.+|+++++.++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3568888999999999999998643 24689999986654445566899999999999999999
Q ss_pred eeeeeeecccCcceEEEEEecCCCCCHHHhhhhcc---------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 009404 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVL---------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDI 357 (535)
Q Consensus 287 l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DL 357 (535)
+++++.. ....+++|||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||
T Consensus 84 ~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dl 156 (296)
T cd05051 84 LLGVCTV----DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDL 156 (296)
T ss_pred EEEEEec----CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---cccccc
Confidence 9999876 346799999999999999997643 125899999999999999999999998 999999
Q ss_pred CCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh--CCCC
Q 009404 358 KSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT--GRQP 435 (535)
Q Consensus 358 k~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt--G~~P 435 (535)
||+||++++++.++|+|||+++........ .......++..|+|||.+....++.++||||||+++|||++ |..|
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 233 (296)
T cd05051 157 ATRNCLVGKNYTIKIADFGMSRNLYSSDYY---RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQP 233 (296)
T ss_pred chhceeecCCCceEEccccceeecccCcce---eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCC
Confidence 999999999999999999999765433211 11223346778999999988899999999999999999998 6677
Q ss_pred CCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 436 IHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
|...... ............. ........+...+..+.+++.+||+.||++|||+.||++.|.+
T Consensus 234 ~~~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 234 YEHLTDQ---QVIENAGHFFRDD--------GRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred CCCcChH---HHHHHHHhccccc--------cccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 7543211 1111000000000 0000011122233568999999999999999999999998863
No 149
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=8.9e-38 Score=315.09 Aligned_cols=268 Identities=24% Similarity=0.347 Sum_probs=202.0
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
++|+..+.||+|+||.||++.+. ++..+|+|.+...........+.+|++++++++||||+++++++.+ ....++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~l 76 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYS----DGEISI 76 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee----CCEEEE
Confidence 36888899999999999999875 4788999998755333334558899999999999999999999876 457799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEA-AAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
||||+++++|.+++... ..+++..+..++.|+++||.|||+. + ++|+||||+|||+++++.++|+|||++....
T Consensus 77 v~ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 151 (308)
T cd06615 77 CMEHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 151 (308)
T ss_pred EeeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccccc
Confidence 99999999999999764 5589999999999999999999984 5 9999999999999999999999999987553
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc--
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT-- 460 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~-- 460 (535)
.. ......++..|+|||.+.+..++.++||||||+++|||++|+.||........................
T Consensus 152 ~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (308)
T cd06615 152 DS-------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHR 224 (308)
T ss_pred cc-------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcc
Confidence 22 123346889999999998888999999999999999999999998643321111100000000000000
Q ss_pred -----------------ccccCCCCCCCCCCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 461 -----------------VISELPDPRLKGDFPK-EEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 461 -----------------~~~~~~~~~l~~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
....+... .....+. .....+.+++.+||..+|++|||+.|+++...-
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 290 (308)
T cd06615 225 PVSGHPPDSPRPMAIFELLDYIVNE-PPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI 290 (308)
T ss_pred cccCCCCCccchhhHHHHHHHHhcC-CCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 00000000 0001111 134458899999999999999999999987554
No 150
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=6.8e-38 Score=309.27 Aligned_cols=253 Identities=28% Similarity=0.397 Sum_probs=188.2
Q ss_pred ccceeCceEEEEEEEcC---CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecC
Q 009404 232 IVGQGGSSYVYRGQLTD---GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308 (535)
Q Consensus 232 ~LG~G~fG~Vy~~~~~~---g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~ 308 (535)
.||+|+||.||+|...+ ...+++|.+...........|.+|+..++.++||||+++++++.. ....++||||+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~----~~~~~lv~e~~ 77 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE----SIPYLLVLEFC 77 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECC----CCceEEEEEeC
Confidence 59999999999997643 457889987655444444568899999999999999999998875 34679999999
Q ss_pred CCCCHHHhhhhccc---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 309 PNGNLRDCLDGVLV---EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 309 ~~gsL~~~l~~~~~---~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
++|+|.+++..... ...++.....++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPED 154 (269)
T ss_pred CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccch
Confidence 99999999976432 23567888999999999999999998 9999999999999999999999999987543322
Q ss_pred CCCCCCCCCccccCccccCccccc-------cCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccC
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAM-------VGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQD 457 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 457 (535)
... ......++..|+|||++. ...++.++||||||+++|||++ |..||....... ...... .
T Consensus 155 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~~----~- 224 (269)
T cd05042 155 YYI---TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ--VLKQVV----R- 224 (269)
T ss_pred hee---ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH--HHHHHh----h-
Confidence 111 112234567899999864 2456889999999999999999 777875432211 000000 0
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 458 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.....+..+..... .+..+.+++..|| .||++|||++||++.|.
T Consensus 225 --~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 225 --EQDIKLPKPQLDLK----YSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred --ccCccCCCCccccc----CCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 00111222222222 3344677888898 59999999999999874
No 151
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.8e-38 Score=322.00 Aligned_cols=243 Identities=21% Similarity=0.293 Sum_probs=192.6
Q ss_pred cccceeCceEEEEEEEcC-CcEEEEEEeccCC--CCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQG--GPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
++||+|+||.||+|+..+ ++.||||++.... .......+..|.+++..+ +||||+++++++.+ ....++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~----~~~~~lv~E 76 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT----KDRLFFVME 76 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc----CCeEEEEEe
Confidence 369999999999998764 7899999997542 122334477888888866 89999999999876 446799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 77 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~- 150 (321)
T cd05591 77 YVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG- 150 (321)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC-
Confidence 99999999998754 45899999999999999999999998 9999999999999999999999999987543221
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
.......||+.|+|||.+....++.++||||||+++|||++|+.||....... .... +.
T Consensus 151 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~---~~~~--------------i~ 209 (321)
T cd05591 151 ----VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD---LFES--------------IL 209 (321)
T ss_pred ----ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH---HHHH--------------HH
Confidence 12334568999999999998899999999999999999999999996543211 1000 00
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-------CHHHHHHH
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARP-------TMSEVVQI 506 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-------t~~evl~~ 506 (535)
... ...|...+..+.+++.+||+.||++|| ++.+++++
T Consensus 210 ~~~--~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 210 HDD--VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred cCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 000 011222335588999999999999999 88888865
No 152
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.1e-38 Score=317.62 Aligned_cols=268 Identities=22% Similarity=0.341 Sum_probs=198.1
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
++|...+.||+|+||.||+|+.. +++.||+|.++..........+.+|+++++.++||||+++++++.. ....++
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~l 81 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHT----DKSLTL 81 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEee----CCeEEE
Confidence 45788899999999999999875 4788999999765444444457899999999999999999999876 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||+++ +|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++.....
T Consensus 82 v~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 156 (309)
T cd07872 82 VFEYLDK-DLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSV 156 (309)
T ss_pred EEeCCCC-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCC
Confidence 9999974 888888653 244889999999999999999999998 99999999999999999999999999876433
Q ss_pred CCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccc-ccC----
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPR-LQD---- 457 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~-~~~---- 457 (535)
.. .......+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||.................. ...
T Consensus 157 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (309)
T cd07872 157 PT-----KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPG 231 (309)
T ss_pred Cc-----cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Confidence 21 11223457899999998864 56899999999999999999999999654322111111100000 000
Q ss_pred --cccccccCCCCCCCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 458 --SGTVISELPDPRLKG----DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 458 --~~~~~~~~~~~~l~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..........+.... ......+..+.+++.+||+.||.+|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 232 ISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 000000000000000 0011234557899999999999999999999984
No 153
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.4e-38 Score=328.79 Aligned_cols=256 Identities=20% Similarity=0.271 Sum_probs=194.3
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
.|+..+.||+|+||+||+|+.. +++.||||++..... ......+.+|+++++.++||||+++++++.+ ....+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~----~~~~~ 77 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD----KDNLY 77 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec----CCEEE
Confidence 5777899999999999999875 488999999975421 2233458899999999999999999999876 44689
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||||+.++.+||+|||++..+.
T Consensus 78 lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~ 152 (381)
T cd05626 78 FVMDYIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFR 152 (381)
T ss_pred EEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccc
Confidence 999999999999999754 45889999999999999999999998 9999999999999999999999999976432
Q ss_pred cCCCC------------------------------------------CCCCCCCccccCccccCccccccCCCCccchHH
Q 009404 383 ADGLP------------------------------------------SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVF 420 (535)
Q Consensus 383 ~~~~~------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVw 420 (535)
..... ..........||+.|+|||.+....++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Diw 232 (381)
T cd05626 153 WTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWW 232 (381)
T ss_pred cccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCcccee
Confidence 10000 000011235799999999999988899999999
Q ss_pred HHHHHHHHHHhCCCCCCCccccccch-hhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHH--hcccCCCCC
Q 009404 421 SFGVVLLELITGRQPIHRSITKGEES-LVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKE--CLQLDPDAR 497 (535)
Q Consensus 421 SlGvil~eLltG~~P~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~--cl~~dP~~R 497 (535)
||||++|||++|+.||.......... ...|.. .+ ........+..+.+++.+ |+..++..|
T Consensus 233 SlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-----------~~-----~~~~~~~~s~~~~dli~~ll~~~~~~~~R 296 (381)
T cd05626 233 SVGVILFEMLVGQPPFLAPTPTETQLKVINWEN-----------TL-----HIPPQVKLSPEAVDLITKLCCSAEERLGR 296 (381)
T ss_pred ehhhHHHHHHhCCCCCcCCCHHHHHHHHHcccc-----------cc-----CCCCCCCCCHHHHHHHHHHccCcccccCC
Confidence 99999999999999996543221110 000000 00 000011123446777777 445666679
Q ss_pred CCHHHHHHH
Q 009404 498 PTMSEVVQI 506 (535)
Q Consensus 498 Pt~~evl~~ 506 (535)
|++.|++.+
T Consensus 297 ~~~~~~l~h 305 (381)
T cd05626 297 NGADDIKAH 305 (381)
T ss_pred CCHHHHhcC
Confidence 999999985
No 154
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=9.4e-38 Score=343.81 Aligned_cols=266 Identities=25% Similarity=0.340 Sum_probs=203.7
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC--ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP--NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..++||+|+||.||+|... +++.||+|++...... .....|.+|+++++.++||||+++++++.+ ....
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d----~~~l 77 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD----GDPV 77 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee----CCEE
Confidence 46888899999999999999875 4899999999754322 234568999999999999999999999876 4467
Q ss_pred EEEEecCCCCCHHHhhhhcc---------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEE
Q 009404 302 LLVFEFMPNGNLRDCLDGVL---------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKI 372 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL 372 (535)
++||||+++|+|.+++.... ...+++..++.++.||++||+|||+.+ |+||||||+|||++.++.++|
T Consensus 78 yLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKL 154 (932)
T PRK13184 78 YYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVI 154 (932)
T ss_pred EEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEE
Confidence 99999999999999986421 123667888999999999999999998 999999999999999999999
Q ss_pred EecCCccccccCCC-------------CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCc
Q 009404 373 TDLGMAKRLKADGL-------------PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRS 439 (535)
Q Consensus 373 ~DFGla~~~~~~~~-------------~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~ 439 (535)
+|||++........ ...........||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 155 iDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~ 234 (932)
T PRK13184 155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRK 234 (932)
T ss_pred EecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCc
Confidence 99999987622110 00011122356999999999999999999999999999999999999999642
Q ss_pred cccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHhhhCCC
Q 009404 440 ITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR-PTMSEVVQILSTIAPD 513 (535)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~R-Pt~~evl~~L~~l~~~ 513 (535)
..... .. . ..+..+... ......+..+.+++.+||+.||++| ++++++++.|+...+.
T Consensus 235 ~~~ki---~~-~-----------~~i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 235 KGRKI---SY-R-----------DVILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred chhhh---hh-h-----------hhccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 21100 00 0 000011000 0011234558889999999999999 5677788888887654
No 155
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.8e-38 Score=333.67 Aligned_cols=269 Identities=22% Similarity=0.291 Sum_probs=195.5
Q ss_pred HhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecc----cC
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFR----GK 297 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~----~~ 297 (535)
...+|...+.||+|+||.||+|... +++.||||++.... ....+|+.+|+.++||||+++++++.... ..
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 3467899999999999999999875 48899999886432 12457999999999999999998864321 22
Q ss_pred cceEEEEEecCCCCCHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-cEEEEe
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGV--LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL-NAKITD 374 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~-~vkL~D 374 (535)
....++||||++ ++|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||||+.++ .+||+|
T Consensus 139 ~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 139 NIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred ceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeec
Confidence 235679999997 5787777532 2355899999999999999999999998 99999999999998654 699999
Q ss_pred cCCccccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhc--
Q 009404 375 LGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA-- 451 (535)
Q Consensus 375 FGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~-- 451 (535)
||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|.+||...............
T Consensus 215 FGla~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~ 288 (440)
T PTZ00036 215 FGSAKNLLAGQ------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLG 288 (440)
T ss_pred cccchhccCCC------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 99998764322 1223467899999998865 46899999999999999999999999654322111000000
Q ss_pred cccccC---cccc-----cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 452 TPRLQD---SGTV-----ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 452 ~~~~~~---~~~~-----~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.+.... .... +..+....+...+|...+..+.+|+.+||+.||.+|||+.|++++
T Consensus 289 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 289 TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 000000 0000 000111111112233344568999999999999999999999964
No 156
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5.8e-38 Score=312.49 Aligned_cols=274 Identities=24% Similarity=0.374 Sum_probs=203.7
Q ss_pred CCCCCcccceeCceEEEEEEE-----cCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 226 KFSGSNIVGQGGSSYVYRGQL-----TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~-----~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
.|...+.||+|+||.||+++. .++..||+|.++..........+.+|+++++.++||||+++.+++.+.. ...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 82 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG--GNG 82 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCC--CCc
Confidence 357788999999999999974 2478899999976554445566899999999999999999999887532 245
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++||||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++..
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred eEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence 689999999999999996532 35899999999999999999999998 99999999999999999999999999987
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
....... ........++..|+|||.+.+..++.++||||||+++|||++++.|................. .. ....
T Consensus 159 ~~~~~~~--~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~-~~-~~~~ 234 (284)
T cd05079 159 IETDKEY--YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHG-QM-TVTR 234 (284)
T ss_pred cccCccc--eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccc-cc-cHHH
Confidence 6543211 111223456778999999988889999999999999999999877653221110000000000 00 0000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
....+.. ......+...+..+.+|+.+||+.+|++|||+.++++.|+.+
T Consensus 235 ~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 235 LVRVLEE-GKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHc-CccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000000 001111223455699999999999999999999999999876
No 157
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.3e-38 Score=318.59 Aligned_cols=242 Identities=24% Similarity=0.352 Sum_probs=188.3
Q ss_pred cccceeCceEEEEEEEcC-CcEEEEEEeccCC--CCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQG--GPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|+||.||+|+..+ ++.||||.++... .....+.+..|..++..+ +||||+++++++.. ....++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~----~~~~~lv~e 76 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT----KEHLFFVME 76 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc----CCEEEEEEc
Confidence 369999999999999754 7899999997532 122223355666776654 89999999998865 446799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 77 ~~~gg~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~- 150 (316)
T cd05592 77 YLNGGDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE- 150 (316)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-
Confidence 99999999998753 45899999999999999999999998 9999999999999999999999999997643321
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... .... +.. .
T Consensus 151 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~---~~~~-----------i~~-~ 211 (316)
T cd05592 151 ----GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE---LFDS-----------ILN-D 211 (316)
T ss_pred ----CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH---HHHH-----------HHc-C
Confidence 12334568999999999998899999999999999999999999996432211 0000 000 0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMS-EVVQ 505 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-evl~ 505 (535)
.+ ..+...+..+.+++.+||+.||++||++. ++++
T Consensus 212 ~~----~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 212 RP----HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CC----CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 11 12223345578899999999999999875 5544
No 158
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4e-38 Score=320.58 Aligned_cols=250 Identities=23% Similarity=0.320 Sum_probs=192.6
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|+||.||+++.. +++.||+|+++... .......+.+|+.++..+ +||||+++++++.. ....++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~----~~~~~lv~E 76 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT----ESRLFFVIE 76 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe----CCEEEEEEe
Confidence 46999999999999975 47899999997542 222334477888888776 89999999999876 456799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|..++... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 77 ~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~- 150 (329)
T cd05618 77 YVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG- 150 (329)
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-
Confidence 99999999988653 56899999999999999999999998 9999999999999999999999999987543221
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCcccccc--chhhhhccccccCccccccc
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGE--ESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 464 (535)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||........ .....+.. ..
T Consensus 151 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~----------~~ 216 (329)
T cd05618 151 ----DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF----------QV 216 (329)
T ss_pred ----CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHH----------HH
Confidence 122345789999999999999999999999999999999999999953221110 00000000 00
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHH
Q 009404 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT------MSEVVQI 506 (535)
Q Consensus 465 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt------~~evl~~ 506 (535)
+... ....|...+..+.+++.+||+.||++||+ +.+++++
T Consensus 217 i~~~--~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 217 ILEK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HhcC--CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 0011 01233344556889999999999999998 4676654
No 159
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=6.7e-38 Score=306.93 Aligned_cols=251 Identities=27% Similarity=0.363 Sum_probs=198.3
Q ss_pred cccceeCceEEEEEEEcC--C--cEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLTD--G--RIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~--g--~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|++|.||+|.+.+ + ..||||.+...........+.+|+.++++++||||+++++++.+ ...++|||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~v~e 75 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-----HPLMMVTE 75 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-----CeEEEEEE
Confidence 468999999999998753 3 36999999876543445568999999999999999999998765 35699999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++++|.+++.......+++.....++.|++.||+|||+.+ ++|+||+|+||+++.++.+||+|||++........
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 76 LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred ecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEecccccccccccccc
Confidence 999999999997654346899999999999999999999998 99999999999999999999999999987754321
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccccC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISEL 465 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
. ........++..|+|||++....++.++||||||+++|||++ |+.||............. . ..
T Consensus 153 ~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~---~----------~~ 217 (257)
T cd05040 153 H--YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKID---K----------EG 217 (257)
T ss_pred c--eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---h----------cC
Confidence 1 111223456788999999998899999999999999999999 999986432211000000 0 00
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 466 PDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 466 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.....+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 218 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 218 ----ERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ----CcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 000112223455889999999999999999999999885
No 160
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=6.1e-38 Score=308.13 Aligned_cols=256 Identities=23% Similarity=0.377 Sum_probs=203.5
Q ss_pred HhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
..++|...+.||+|+||.||++.+.++..+|+|.+.... .....+.+|+++++.++|+||+++.+++.+ ...+
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 76 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-----EPIY 76 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh--hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-----CCeE
Confidence 446788889999999999999998778889999887542 234568899999999999999999988764 2468
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
++|||+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIE 153 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeecc
Confidence 9999999999999997655556899999999999999999999998 9999999999999999999999999997664
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
..... ......++..|+|||++....++.++|+||||+++|++++ |+.||....... ...+..
T Consensus 154 ~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~~~--------- 217 (260)
T cd05073 154 DNEYT----AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---VIRALE--------- 217 (260)
T ss_pred CCCcc----cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHh---------
Confidence 33211 1122345678999999998889999999999999999999 888986432211 100000
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
... ....+...+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 218 --~~~----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 218 --RGY----RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred --CCC----CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 000 0011122334588999999999999999999999999753
No 161
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.4e-38 Score=325.60 Aligned_cols=206 Identities=23% Similarity=0.366 Sum_probs=172.6
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||+||+++.. +++.||||++.... .......+.+|+.++..++|+||+++++.+.+ ....
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~----~~~~ 76 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD----KLNL 76 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec----CCeE
Confidence 46888899999999999999875 48899999997532 12223457889999999999999999998876 4567
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++..
T Consensus 77 ~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~ 151 (363)
T cd05628 77 YLIMEFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGL 151 (363)
T ss_pred EEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccc
Confidence 9999999999999999753 56899999999999999999999998 999999999999999999999999998765
Q ss_pred ccCCCCC------------------------------CCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh
Q 009404 382 KADGLPS------------------------------CSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431 (535)
Q Consensus 382 ~~~~~~~------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt 431 (535)
....... .........||+.|+|||.+.+..++.++|||||||++|||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~ 231 (363)
T cd05628 152 KKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI 231 (363)
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHh
Confidence 3211000 0000123579999999999999999999999999999999999
Q ss_pred CCCCCCCc
Q 009404 432 GRQPIHRS 439 (535)
Q Consensus 432 G~~P~~~~ 439 (535)
|+.||...
T Consensus 232 G~~Pf~~~ 239 (363)
T cd05628 232 GYPPFCSE 239 (363)
T ss_pred CCCCCCCC
Confidence 99999653
No 162
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=7.6e-38 Score=309.32 Aligned_cols=250 Identities=27% Similarity=0.454 Sum_probs=193.8
Q ss_pred cccceeCceEEEEEEEcC-Cc--EEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLTD-GR--IVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~-g~--~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|+||.||+|++.+ +. .+++|.++..........+.+|++++.++ +||||+++++++.. ....+++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~----~~~~~lv~e 76 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH----RGYLYLAIE 76 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec----CCCceEEEE
Confidence 368999999999999754 43 57889887544444455688999999999 89999999999876 345699999
Q ss_pred cCCCCCHHHhhhhcc--------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEE
Q 009404 307 FMPNGNLRDCLDGVL--------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKI 372 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL 372 (535)
|+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+|||+++++.+||
T Consensus 77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl 153 (270)
T cd05047 77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKI 153 (270)
T ss_pred eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEE
Confidence 999999999996532 124789999999999999999999988 999999999999999999999
Q ss_pred EecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhc
Q 009404 373 TDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWA 451 (535)
Q Consensus 373 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~ 451 (535)
+|||++....... .......+..|+|||++....++.++||||||+++|||++ |..||....... ....
T Consensus 154 ~dfgl~~~~~~~~------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~~~~- 223 (270)
T cd05047 154 ADFGLSRGQEVYV------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYEK- 223 (270)
T ss_pred CCCCCccccchhh------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH---HHHH-
Confidence 9999986322110 0111223567999999988889999999999999999997 999985432211 0000
Q ss_pred cccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 452 TPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
+.. ......+...+..+.+++.+||+.||.+|||+.++++.|.++.
T Consensus 224 -------------~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 224 -------------LPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -------------HhC-CCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 000 0000112223345889999999999999999999999998874
No 163
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.6e-38 Score=321.28 Aligned_cols=248 Identities=23% Similarity=0.306 Sum_probs=193.6
Q ss_pred CCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCC-CccceeeeeeecccCcceE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHC-HVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~-niv~l~g~~~~~~~~~~~~ 301 (535)
+|+..+.||+|+||.||+|+..+ ++.||||++.... .....+.+..|.+++..+.|+ +|+++++++.+ ....
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~----~~~~ 76 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT----MDRL 76 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc----CCEE
Confidence 46778999999999999998764 7899999997532 123334578899999999665 57788887765 4467
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||++...
T Consensus 77 ~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~ 151 (324)
T cd05587 77 YFVMEYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKEN 151 (324)
T ss_pred EEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceec
Confidence 9999999999999998754 45899999999999999999999998 999999999999999999999999998753
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
.... .......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ...
T Consensus 152 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~~------------ 211 (324)
T cd05587 152 IFGG-----KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---LFQ------------ 211 (324)
T ss_pred CCCC-----CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHH------------
Confidence 2211 12234568999999999999999999999999999999999999996432211 000
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM-----SEVVQI 506 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~evl~~ 506 (535)
.+... ...++...+..+.+++.+||+.||.+|++. .+++++
T Consensus 212 --~i~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 212 --SIMEH--NVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred --HHHcC--CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 00000 011223334558899999999999999986 566553
No 164
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.2e-37 Score=309.55 Aligned_cols=253 Identities=24% Similarity=0.349 Sum_probs=196.9
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
+|+..++||+|+||.||+|.+. +++.||+|++...........+.+|++++++++||||+++++++.. ....++|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv 77 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV----ENRISIC 77 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE----CCEEEEE
Confidence 5677789999999999999864 5889999998765444444568899999999999999999999886 4467899
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+++++|..+ ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++......
T Consensus 78 ~e~~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 78 TEFMDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred EecCCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 999999999765 23678889999999999999999998 999999999999999999999999999765432
Q ss_pred CCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (535)
......||..|+|||++.+..++.++||||||+++|+|++|+.||............... ...+..
T Consensus 149 -------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-------~~~~~~ 214 (279)
T cd06619 149 -------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL-------LQCIVD 214 (279)
T ss_pred -------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH-------HHHHhc
Confidence 123346889999999999989999999999999999999999999653221111000000 000000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 465 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
...+.+. ....+..+.+++.+||+.+|++||++.|+++...
T Consensus 215 ~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~ 255 (279)
T cd06619 215 EDPPVLP---VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPF 255 (279)
T ss_pred cCCCCCC---CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcc
Confidence 0011110 1112345889999999999999999999998644
No 165
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.4e-38 Score=321.40 Aligned_cols=247 Identities=23% Similarity=0.310 Sum_probs=194.1
Q ss_pred CCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCC--CChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG--PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~ 301 (535)
+|...+.||+|+||.||+|+... ++.||||.+..... ......+..|..++..+ +|++|+++++++.+ ....
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~----~~~~ 76 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT----MDRL 76 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec----CCEE
Confidence 46778899999999999998764 78999999975421 12223466788888777 68899999988875 4467
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 77 ~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~ 151 (323)
T cd05616 77 YFVMEYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN 151 (323)
T ss_pred EEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceec
Confidence 9999999999999998654 45899999999999999999999998 999999999999999999999999998754
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
.... .......||+.|+|||++....++.++|||||||++|||++|+.||....... ...
T Consensus 152 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~---~~~------------ 211 (323)
T cd05616 152 MWDG-----VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LFQ------------ 211 (323)
T ss_pred CCCC-----CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH---HHH------------
Confidence 3221 12334568999999999999999999999999999999999999996432211 100
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM-----SEVVQ 505 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~evl~ 505 (535)
.+... ...+|...+..+.+++.+||+.||++|++. .++.+
T Consensus 212 --~i~~~--~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~ 256 (323)
T cd05616 212 --SIMEH--NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 256 (323)
T ss_pred --HHHhC--CCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence 00000 012233345568899999999999999984 56654
No 166
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.8e-38 Score=328.01 Aligned_cols=257 Identities=22% Similarity=0.309 Sum_probs=199.3
Q ss_pred HHHHHhcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecc
Q 009404 219 ALEHATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFR 295 (535)
Q Consensus 219 ~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~ 295 (535)
.++...++|+..+.||+|+||.||+++... ++.+|+|++.... .......+.+|+.+++.++||||+++++++.+
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~-- 114 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD-- 114 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc--
Confidence 344556789999999999999999999864 8899999986421 12233457889999999999999999998875
Q ss_pred cCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEec
Q 009404 296 GKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDL 375 (535)
Q Consensus 296 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DF 375 (535)
....++||||+++|+|.+++.. ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+||
T Consensus 115 --~~~~~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DF 186 (370)
T cd05621 115 --DKYLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADF 186 (370)
T ss_pred --CCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEec
Confidence 4578999999999999999965 35889999999999999999999998 999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCCccccCccccCccccccC----CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhc
Q 009404 376 GMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG----RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA 451 (535)
Q Consensus 376 Gla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~ 451 (535)
|++........ .......||+.|+|||.+... .++.++|||||||++|||++|+.||..........
T Consensus 187 G~a~~~~~~~~----~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~----- 257 (370)
T cd05621 187 GTCMKMDETGM----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYS----- 257 (370)
T ss_pred ccceecccCCc----eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHH-----
Confidence 99987643221 112345699999999998653 37889999999999999999999996433211100
Q ss_pred cccccCcccccccCCCCCCCCCCC--HHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 009404 452 TPRLQDSGTVISELPDPRLKGDFP--KEEMQIMAYLAKECLQLDPDA--RPTMSEVVQI 506 (535)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~ 506 (535)
++.+......+| ...+..+.+++..|+..++.+ |+++.|++++
T Consensus 258 ------------~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 258 ------------KIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ------------HHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 011100000111 123455788999999855543 8999999986
No 167
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1e-37 Score=306.58 Aligned_cols=255 Identities=25% Similarity=0.400 Sum_probs=193.1
Q ss_pred cccceeCceEEEEEEEcC----CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLTD----GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~----g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|+||.||+|.+.+ +..||+|++...........+.+|+.+++.++||||+++++++.... ...++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE---GSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC---CCcEEEEe
Confidence 468999999999998642 45799999865433334456889999999999999999999876432 24589999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++.......
T Consensus 78 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 78 YMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred cCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 999999999997542 34678888999999999999999998 99999999999999999999999999976543221
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCC-CCCCCccccccchhhhhccccccCcccccccC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGR-QPIHRSITKGEESLVLWATPRLQDSGTVISEL 465 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~-~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
.. ........++..|+|||++....++.++||||||+++|||++|. +||...... ....... ..
T Consensus 154 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~---~~~~~~~-----------~~ 218 (262)
T cd05058 154 YS-VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF---DITVYLL-----------QG 218 (262)
T ss_pred ee-ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHh-----------cC
Confidence 11 11112334567899999998889999999999999999999965 455322111 1111000 00
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 466 PDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 466 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
..+ ..+...+..+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 219 ~~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 219 RRL----LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CCC----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 000 111222345889999999999999999999999999874
No 168
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=7.6e-39 Score=326.05 Aligned_cols=254 Identities=24% Similarity=0.290 Sum_probs=198.2
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|...+.||+|+||+||++... +++.||+|+++.... ......+.+|+.+++.++|+||+++++++.+ ....
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~----~~~~ 76 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD----KDNL 76 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec----CCeE
Confidence 36788899999999999999875 589999999975422 2334458889999999999999999998875 4467
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 77 ~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 152 (330)
T cd05601 77 YLVMEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARL 152 (330)
T ss_pred EEEECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeEC
Confidence 9999999999999999764 245899999999999999999999998 999999999999999999999999999876
Q ss_pred ccCCCCCCCCCCCccccCccccCccccc------cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAM------VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~ 455 (535)
...... ......||+.|+|||++. ...++.++||||||+++|||++|+.||.............
T Consensus 153 ~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~------ 222 (330)
T cd05601 153 TANKMV----NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIM------ 222 (330)
T ss_pred CCCCce----eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHH------
Confidence 543211 122346899999999886 4567899999999999999999999996433211100000
Q ss_pred cCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 456 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.. .... ........+..+.+|+..||+ +|++|||+.+++++
T Consensus 223 -~~----~~~~----~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 223 -NF----QRFL----KFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred -cC----CCcc----CCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 00 0000 000011234558889999998 99999999999864
No 169
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.6e-39 Score=309.69 Aligned_cols=272 Identities=25% Similarity=0.322 Sum_probs=203.0
Q ss_pred CCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccC-cceEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGK-RAMRLLV 304 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~-~~~~~lV 304 (535)
|...+++|.|+||.||+|.... ++.||||+.-.+... -.+|+++|+.++|||||+++-++....+. .....+|
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4556889999999999999754 789999998765432 25799999999999999999988766555 3466789
Q ss_pred EecCCCCCHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-CcEEEEecCCcccc
Q 009404 305 FEFMPNGNLRDCLDGV--LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN-LNAKITDLGMAKRL 381 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~-~~vkL~DFGla~~~ 381 (535)
|||||. +|.++++.. ....++...+.-+..||.+||+|||+.+ |+||||||.|+|+|.+ +.+||+|||.|+.+
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999975 999999753 2356888889999999999999999988 9999999999999965 89999999999988
Q ss_pred ccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh--hhccccccCc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV--LWATPRLQDS 458 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~--~~~~~~~~~~ 458 (535)
..+. ......-|..|.|||.+.+ ..|+.+.||||.||++.||+-|++-|.+......-... ....+..++.
T Consensus 177 ~~~e------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 177 VKGE------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDI 250 (364)
T ss_pred ccCC------CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 7653 2244567788999999886 56999999999999999999999988664322111111 1111111110
Q ss_pred ---ccccccCCCCCCCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHhhhCCC
Q 009404 459 ---GTVISELPDPRLKG-----DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ--ILSTIAPD 513 (535)
Q Consensus 459 ---~~~~~~~~~~~l~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~l~~~ 513 (535)
.....+...+.+.. -+......+..+|+.++|+.+|.+|.++.|++. .++++...
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 00001111122211 123344566899999999999999999999995 45555433
No 170
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=7e-38 Score=313.89 Aligned_cols=265 Identities=24% Similarity=0.370 Sum_probs=200.1
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-----------------CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccc
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-----------------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-----------------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~ 286 (535)
.++|+..+.||+|+||.||++... ++..||+|++...........|.+|+++++.++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 356888899999999999998643 244699999986544445567899999999999999999
Q ss_pred eeeeeeecccCcceEEEEEecCCCCCHHHhhhhccc---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 009404 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLV---------EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDI 357 (535)
Q Consensus 287 l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DL 357 (535)
+++++.. ....++||||+++++|.+++..... ..+++..+..++.|++.||+|||+.+ ++|+||
T Consensus 84 ~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl 156 (296)
T cd05095 84 LLAVCIT----SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDL 156 (296)
T ss_pred EEEEEec----CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccC
Confidence 9999876 3456999999999999999865321 23778899999999999999999998 999999
Q ss_pred CCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh--CCCC
Q 009404 358 KSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT--GRQP 435 (535)
Q Consensus 358 k~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt--G~~P 435 (535)
||+|||+++++.++|+|||++..+...... .......++..|+|||....+.++.++||||||+++|||++ |..|
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p 233 (296)
T cd05095 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDYY---RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQP 233 (296)
T ss_pred ChheEEEcCCCCEEeccCcccccccCCcce---eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999865433211 11122334678999999888889999999999999999998 6778
Q ss_pred CCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 436 IHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
|.......... .......... .... ...+..++..+.+++.+||+.||++||++.||++.|++
T Consensus 234 ~~~~~~~~~~~---~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 234 YSQLSDEQVIE---NTGEFFRDQG---RQVY-----LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ccccChHHHHH---HHHHHHhhcc---cccc-----CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 75432211000 0000000000 0000 01112233568899999999999999999999999863
No 171
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.2e-39 Score=322.77 Aligned_cols=253 Identities=24% Similarity=0.326 Sum_probs=211.2
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
++|...+++|+|+||.++..+.+ ++..+++|.+.-.. ....+.....|+.++++++|||||.+.+.+.+. +...+
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~---~~~l~ 80 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED---GQLLC 80 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC---CceEE
Confidence 46777899999999999999865 47789999997554 233334578999999999999999999988762 23389
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
|||+|++||+|.+.+....+..+++..+..++.|++.|+.|||++. |+|||||+.|||++.+..|||+|||+|+.+.
T Consensus 81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~ 157 (426)
T KOG0589|consen 81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILN 157 (426)
T ss_pred EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcC
Confidence 9999999999999998876677999999999999999999999887 9999999999999999999999999999987
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
... .......||+.|+.||.+.+.+|..|+|||||||.+|||++-+++|....... + +
T Consensus 158 ~~~-----~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~---L--------------i 215 (426)
T KOG0589|consen 158 PED-----SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE---L--------------I 215 (426)
T ss_pred Cch-----hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH---H--------------H
Confidence 653 13455789999999999999999999999999999999999999996543321 1 1
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.++.... ....|...+..+..++..|++.+|+.||++.+++..
T Consensus 216 ~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 216 LKINRGL-YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHhhcc-CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1111111 223455666779999999999999999999999976
No 172
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-39 Score=308.01 Aligned_cols=274 Identities=25% Similarity=0.341 Sum_probs=207.3
Q ss_pred HhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccC-CCCChhHHHHHHHHHHhccCCCCccceeeeeee-cccCcc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQ-GGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSE-FRGKRA 299 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~-~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~~ 299 (535)
+...|...+.||+|++|.|+.+... +|+.||||++... ......++-.+|+++|+.++|+||+.+++++.. ..+.-.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3445666788999999999999875 5899999999732 223334557899999999999999999999875 333455
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..|+|+|+| ..+|...++.. +.++......+++|+++||+|+|+.+ |+||||||+|+|++.+..+||+|||+|+
T Consensus 100 DvYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEecccccee
Confidence 789999999 67999998763 44999999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccc-cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccC-
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD- 457 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~- 457 (535)
..... ......+..+.|.+|.|||.+. ...|+...||||.|||+.||++|++.|........-.+.....+...+
T Consensus 174 ~~~~~---~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 174 YLDKF---FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE 250 (359)
T ss_pred ecccc---CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence 88654 1123346678899999999875 567999999999999999999999988655433222222111111100
Q ss_pred ---------cccccccCC---CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 458 ---------SGTVISELP---DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 458 ---------~~~~~~~~~---~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
....+..++ ...+...+| .......+|+.+||..||.+|+|++|.+++
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000111111 111111223 334557899999999999999999999974
No 173
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=8.3e-38 Score=311.76 Aligned_cols=252 Identities=28% Similarity=0.394 Sum_probs=199.1
Q ss_pred CCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCC--hhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPN--ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
|+..+.||+|+||.||++... +++.||||.+....... ....+..|+.+++.++|+|++++++.+.+ ....++
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~----~~~~~l 77 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET----KDALCL 77 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec----CCEEEE
Confidence 566788999999999999875 48899999987543222 22347789999999999999999998876 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++.....
T Consensus 78 v~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05630 78 VLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE 154 (285)
T ss_pred EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCC
Confidence 999999999999997655556999999999999999999999998 99999999999999999999999999876543
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
.. ......|+..|+|||.+....++.++||||||+++|||++|+.||.............. . ..
T Consensus 155 ~~------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~----~------~~ 218 (285)
T cd05630 155 GQ------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER----L------VK 218 (285)
T ss_pred Cc------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHh----h------hh
Confidence 21 11234689999999999999999999999999999999999999965332111000000 0 00
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT-----MSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~~ 506 (535)
.. .. ..+......+.+|+.+||+.||++||| +.|++++
T Consensus 219 ~~-~~----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 219 EV-QE----EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred hh-hh----hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 00 00 112233455889999999999999999 8899874
No 174
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=4.6e-38 Score=318.68 Aligned_cols=243 Identities=23% Similarity=0.337 Sum_probs=192.7
Q ss_pred cccceeCceEEEEEEEcC-CcEEEEEEeccCC--CCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQG--GPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|+||+||++.+.. ++.||||+++... .......+..|.+++..+ +||||+++++++.+ ....++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~----~~~~~lv~e 76 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT----KDRLFFVME 76 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc----CCEEEEEEc
Confidence 369999999999998764 7899999997542 122334467888888887 79999999998875 446799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 77 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 150 (318)
T cd05570 77 YVNGGDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG- 150 (318)
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC-
Confidence 99999999988754 46899999999999999999999998 9999999999999999999999999987532221
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .... .+.
T Consensus 151 ----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~---~~~~--------------~i~ 209 (318)
T cd05570 151 ----VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED---ELFQ--------------SIL 209 (318)
T ss_pred ----CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH---HHHH--------------HHH
Confidence 1223356899999999999999999999999999999999999999643211 1000 000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM-----SEVVQI 506 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~evl~~ 506 (535)
... ..++...+..+.+++.+||+.||++||++ .++++.
T Consensus 210 ~~~--~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 210 EDE--VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred cCC--CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 000 01222334568899999999999999999 888764
No 175
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2e-38 Score=328.98 Aligned_cols=257 Identities=21% Similarity=0.292 Sum_probs=195.1
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||+||+++.. +++.||||++.... .......+.+|+++++.++||||+++++++.+ ....
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~----~~~~ 76 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD----AQYL 76 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc----CCee
Confidence 36788899999999999999875 58999999986432 12233457889999999999999999999876 4577
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~ 151 (377)
T cd05629 77 YLIMEFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGF 151 (377)
T ss_pred EEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccc
Confidence 9999999999999999753 56889999999999999999999998 999999999999999999999999999643
Q ss_pred ccCCCCC----------CC--------------------------------CCCCccccCccccCccccccCCCCccchH
Q 009404 382 KADGLPS----------CS--------------------------------SSPARMQGTFGYFAPEYAMVGRASLMSDV 419 (535)
Q Consensus 382 ~~~~~~~----------~~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDV 419 (535)
....... .. .......||+.|+|||++....++.++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 231 (377)
T cd05629 152 HKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDW 231 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceee
Confidence 2210000 00 00012469999999999998899999999
Q ss_pred HHHHHHHHHHHhCCCCCCCccccccch-hhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCC-
Q 009404 420 FSFGVVLLELITGRQPIHRSITKGEES-LVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR- 497 (535)
Q Consensus 420 wSlGvil~eLltG~~P~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~R- 497 (535)
|||||++|||++|..||.......... ...|. ..+..+. ....+..+.+++.+|+. +|.+|
T Consensus 232 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~-----------~~~~~p~-----~~~~s~~~~dli~~lL~-~~~~r~ 294 (377)
T cd05629 232 WSLGAIMFECLIGWPPFCSENSHETYRKIINWR-----------ETLYFPD-----DIHLSVEAEDLIRRLIT-NAENRL 294 (377)
T ss_pred EecchhhhhhhcCCCCCCCCCHHHHHHHHHccC-----------CccCCCC-----CCCCCHHHHHHHHHHhc-CHhhcC
Confidence 999999999999999996433211100 00000 0000000 01123457889999997 66665
Q ss_pred --CCHHHHHHHH
Q 009404 498 --PTMSEVVQIL 507 (535)
Q Consensus 498 --Pt~~evl~~L 507 (535)
+++.|++++-
T Consensus 295 ~r~~~~~~l~hp 306 (377)
T cd05629 295 GRGGAHEIKSHP 306 (377)
T ss_pred CCCCHHHHhcCC
Confidence 6999998863
No 176
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=8.8e-39 Score=323.89 Aligned_cols=239 Identities=25% Similarity=0.313 Sum_probs=190.0
Q ss_pred cccceeCceEEEEEEE----cCCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEE
Q 009404 231 NIVGQGGSSYVYRGQL----TDGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~----~~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~ 305 (535)
+.||+|+||.||+++. .+|+.||+|++..... ......+..|++++++++||||+++++++.+ ....++||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 77 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT----EGKLYLIL 77 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc----CCEEEEEE
Confidence 5799999999999875 3588999999975422 1223346789999999999999999999876 44679999
Q ss_pred ecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 306 EFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 306 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 78 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 152 (318)
T cd05582 78 DFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 152 (318)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC
Confidence 999999999999653 45899999999999999999999998 9999999999999999999999999987654321
Q ss_pred CCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccC
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISEL 465 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
.......||+.|+|||.+....++.++||||||+++|||++|+.||........ .. .+
T Consensus 153 -----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~---~~--------------~i 210 (318)
T cd05582 153 -----KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET---MT--------------MI 210 (318)
T ss_pred -----CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH---HH--------------HH
Confidence 122345689999999999888899999999999999999999999964322110 00 00
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 009404 466 PDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSE 502 (535)
Q Consensus 466 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 502 (535)
... ....|...+..+.+++.+||+.||++||++.+
T Consensus 211 ~~~--~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 211 LKA--KLGMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HcC--CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 000 01123334456889999999999999999544
No 177
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8e-38 Score=316.61 Aligned_cols=242 Identities=24% Similarity=0.370 Sum_probs=189.5
Q ss_pred cccceeCceEEEEEEEcC-CcEEEEEEeccCCC--CChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG--PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|+||.||+|+..+ ++.||||+++.... ......+..|..++..+ +||||+++++++.+ ....++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~----~~~~~lv~e 76 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT----KENLFFVME 76 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe----CCEEEEEEe
Confidence 369999999999999764 78999999975421 12233466777777764 99999999999876 446799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 77 y~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 150 (316)
T cd05619 77 YLNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD- 150 (316)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-
Confidence 99999999999753 45899999999999999999999998 9999999999999999999999999987543221
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ..... . ..
T Consensus 151 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~~i-----------~-~~ 211 (316)
T cd05619 151 ----AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE---LFQSI-----------R-MD 211 (316)
T ss_pred ----CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH---HHHHH-----------H-hC
Confidence 12234568999999999998899999999999999999999999996432211 00000 0 00
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMS-EVVQ 505 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-evl~ 505 (535)
.+. .+......+.+++.+||+.||++||++. ++.+
T Consensus 212 ~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 212 NPC----YPRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred CCC----CCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 111 1222334578899999999999999997 6654
No 178
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.1e-37 Score=310.94 Aligned_cols=271 Identities=25% Similarity=0.336 Sum_probs=197.0
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCC-hhHHHHHHHHHHhcc---CCCCccceeeeeeeccc-Ccc
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPN-ADSVFLTEVDMLSRL---HHCHVVPLVGYCSEFRG-KRA 299 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~-~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~~~~-~~~ 299 (535)
+|+..+.||+|+||+||+|+.. +++.||+|.++...... ....+.+|+++++.+ +||||+++++++..... ...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4777889999999999999876 48999999987543222 223356777777665 79999999998865332 234
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..++||||++ ++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||++.
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCccc
Confidence 6799999997 58999987655556899999999999999999999998 9999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccch-hhhhccccccCc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEES-LVLWATPRLQDS 458 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~-~~~~~~~~~~~~ 458 (535)
...... ......||..|+|||.+.+..++.++|||||||++|||++|+.||.......... ............
T Consensus 157 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07863 157 IYSCQM------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 230 (288)
T ss_pred cccCcc------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhh
Confidence 664321 1233467899999999998899999999999999999999999985432211100 000000000000
Q ss_pred ccccccCCCCCCC-------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 459 GTVISELPDPRLK-------GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 459 ~~~~~~~~~~~l~-------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
...........+. ..........+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 231 WPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred CcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000000 01112234567899999999999999999999863
No 179
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1e-37 Score=310.14 Aligned_cols=256 Identities=27% Similarity=0.407 Sum_probs=198.8
Q ss_pred cCCCCCcccceeCceEEEEEEEc------CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKR 298 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 298 (535)
.+|...++||+|+||.||++... ++..+|+|.+.... ......+.+|+++++.++|+||+++++++.+ .
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~ 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTVLQHQHIVRFYGVCTE----G 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-HHHHHHHHHHHHHHhcCCCCCCceEEEEEec----C
Confidence 45667789999999999999742 35689999887543 2334568999999999999999999998876 3
Q ss_pred ceEEEEEecCCCCCHHHhhhhccc-------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVLV-------------EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD 365 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~ 365 (535)
...+++|||+++++|.+++..... ..+++..+..++.|++.||+|||+.+ ++||||||+|||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~ 156 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVG 156 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEc
Confidence 456999999999999999975421 24889999999999999999999998 99999999999999
Q ss_pred CCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCcccccc
Q 009404 366 ENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGE 444 (535)
Q Consensus 366 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~ 444 (535)
+++.+||+|||++......... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||........
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 233 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYY---RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA 233 (280)
T ss_pred CCCCEEECCCCceeEcCCCcee---ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH
Confidence 9999999999999765432211 11122345678999999999999999999999999999998 8888854322111
Q ss_pred chhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 445 ESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
..... ..... ..+...+..+.+++.+||+.||++||++.||++.|+.
T Consensus 234 ~~~~~--------------~~~~~----~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 234 IECIT--------------QGREL----ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHH--------------cCccC----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 10000 00000 1112233458899999999999999999999998863
No 180
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1e-37 Score=333.01 Aligned_cols=250 Identities=22% Similarity=0.279 Sum_probs=197.2
Q ss_pred CCCCcccceeCceEEEEEEEc-C-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT-D-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~-~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
|...+.||+|+||.||+|... + ++.||+|.+.... ......+.+|+.+++.++||||+++++++.. ....++|
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~----~~~~~lv 143 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-ERQAAYARSELHCLAACDHFGIVKHFDDFKS----DDKLLLI 143 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE----CCEEEEE
Confidence 677889999999999999754 3 6778888765432 2333457889999999999999999999876 4577999
Q ss_pred EecCCCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 305 FEFMPNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
|||+++|+|.++|.... ...+++..+..++.|++.||.|||+.+ |+||||||+||||+.++.+||+|||+++...
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 99999999999886432 235889999999999999999999998 9999999999999999999999999998764
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
.... ........||+.|+|||++....++.++||||||+++|||++|+.||....... ...
T Consensus 221 ~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~---~~~------------- 281 (478)
T PTZ00267 221 DSVS---LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE---IMQ------------- 281 (478)
T ss_pred Cccc---cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHH-------------
Confidence 3221 112334569999999999999999999999999999999999999996432210 000
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
.+..... ...+...+..+.+++.+||+.||++||++.+++.
T Consensus 282 -~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 282 -QVLYGKY-DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -HHHhCCC-CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 0000000 0122233456899999999999999999999875
No 181
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.8e-37 Score=303.74 Aligned_cols=250 Identities=32% Similarity=0.492 Sum_probs=201.5
Q ss_pred cccceeCceEEEEEEEcC----CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLTD----GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~----g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|+||.||++...+ +..|++|.+...........+.+|+++++.++|+||+++++++.. ....++|||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----~~~~~lv~e 76 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE----EEPLYLVLE 76 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC----CCceEEEEE
Confidence 469999999999998764 788999999876544445668999999999999999999999876 456799999
Q ss_pred cCCCCCHHHhhhhcc-------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 307 FMPNGNLRDCLDGVL-------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
|+++++|.+++.... ...+++..+..++.|++.||+|||+++ ++|+||+|+||++++++.++|+|||.+.
T Consensus 77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~ 153 (262)
T cd00192 77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSR 153 (262)
T ss_pred eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccc
Confidence 999999999997642 255899999999999999999999998 9999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDS 458 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
....... ........++..|+|||.+....++.++||||||+++|||++ |..||...... ......
T Consensus 154 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~------- 220 (262)
T cd00192 154 DVYDDDY---YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE---EVLEYL------- 220 (262)
T ss_pred ccccccc---cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHH-------
Confidence 7765321 112234457889999999988899999999999999999999 58888654211 110000
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.. ......+...+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 221 ----~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 221 ----RK----GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ----Hc----CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 00 0011223333556899999999999999999999999874
No 182
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.6e-37 Score=306.89 Aligned_cols=259 Identities=25% Similarity=0.399 Sum_probs=204.0
Q ss_pred cCCCCCcccceeCceEEEEEEEcC----CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD----GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~----g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
++|+..+.||+|+||.||+|.+.+ ...|+||...........+.+.+|+.+++.++||||+++++++.+ ..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~ 80 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-----NP 80 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-----CC
Confidence 457778899999999999998653 246999988765544445568999999999999999999998764 23
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||+|||++.++.++|+|||+++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~ 156 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRY 156 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeee
Confidence 589999999999999997532 35899999999999999999999998 99999999999999999999999999886
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
........ .....++..|+|||.+....++.++||||||+++|||++ |..||........ ..+.
T Consensus 157 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~---~~~~-------- 221 (270)
T cd05056 157 LEDESYYK----ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV---IGRI-------- 221 (270)
T ss_pred ccccccee----cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH---HHHH--------
Confidence 65432111 112234568999999988889999999999999999996 9999864432211 0000
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCc
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~ 514 (535)
...... ..+...+..+.+++.+||..+|++|||+.++++.|+.+..+.
T Consensus 222 ---~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~ 269 (270)
T cd05056 222 ---ENGERL----PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE 269 (270)
T ss_pred ---HcCCcC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 000001 112233456889999999999999999999999999986553
No 183
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.1e-38 Score=319.06 Aligned_cols=264 Identities=26% Similarity=0.395 Sum_probs=203.9
Q ss_pred HhcCCCCCcccceeCceEEEEEEEcC--------CcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeee
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLTD--------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSE 293 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~~--------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~ 293 (535)
...+|.+.+.||+|+||.||+++... +..||+|.++..........+.+|+++++++ +||||+++++++..
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 34567888999999999999997521 2469999988654444455688999999999 89999999999876
Q ss_pred cccCcceEEEEEecCCCCCHHHhhhhcc--------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 009404 294 FRGKRAMRLLVFEFMPNGNLRDCLDGVL--------------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKS 359 (535)
Q Consensus 294 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~ 359 (535)
....+++|||+++|+|.+++.... ...+++.+++.++.|++.||+|||+.+ ++||||||
T Consensus 90 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp 162 (334)
T cd05100 90 ----DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAA 162 (334)
T ss_pred ----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eecccccc
Confidence 345799999999999999996532 234789999999999999999999998 99999999
Q ss_pred CCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCC
Q 009404 360 SNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHR 438 (535)
Q Consensus 360 ~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~ 438 (535)
+|||+++++.+||+|||+++........ .......++..|+|||.+....++.++||||||+++|||++ |..||..
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 239 (334)
T cd05100 163 RNVLVTEDNVMKIADFGLARDVHNIDYY---KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 239 (334)
T ss_pred ceEEEcCCCcEEECCcccceeccccccc---ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCC
Confidence 9999999999999999999765432111 11122234567999999999999999999999999999998 7888854
Q ss_pred ccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCc
Q 009404 439 SITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514 (535)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~ 514 (535)
..... ..... ..- .....+...+..+.+++.+||+.+|++|||+.|+++.|+.+....
T Consensus 240 ~~~~~---~~~~~-----------~~~----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 240 IPVEE---LFKLL-----------KEG----HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred CCHHH---HHHHH-----------HcC----CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 32111 00000 000 000112223345889999999999999999999999999987544
No 184
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.2e-38 Score=320.85 Aligned_cols=241 Identities=22% Similarity=0.247 Sum_probs=186.0
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHH-HHHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEV-DMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei-~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|+||+||+++.. +++.||+|++..... ......+..|. .+++.++||||+++++++.+ ....++|||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~----~~~~~lv~e 76 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT----ADKLYFVLD 76 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc----CCeEEEEEe
Confidence 36999999999999976 478899999874321 12222344444 45678899999999998876 446799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|.+++... ..+.+.....++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 77 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~-- 149 (325)
T cd05602 77 YINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-- 149 (325)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccC--
Confidence 99999999999753 45788889999999999999999998 999999999999999999999999998754322
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
........||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ... +.
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~--------------i~ 209 (325)
T cd05602 150 ---NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM---YDN--------------IL 209 (325)
T ss_pred ---CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH---HHH--------------HH
Confidence 1123345789999999999999999999999999999999999999964322110 000 00
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVV 504 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl 504 (535)
... ...+...+..+.+++.+||+.||.+||++.+.+
T Consensus 210 ~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 210 NKP--LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred hCC--cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 000 011222345588899999999999999987433
No 185
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.6e-37 Score=308.45 Aligned_cols=261 Identities=26% Similarity=0.409 Sum_probs=204.4
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-Cc----EEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~----~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
.+|...+.||+|+||.||+|.+.+ ++ .+|+|.+...........+.+|+.+++.++||||+++++++.. .
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 81 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-----S 81 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----C
Confidence 456777899999999999998653 33 6999988766544445668899999999999999999999875 3
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||+++
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccc
Confidence 5689999999999999997642 34899999999999999999999988 9999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDS 458 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
........ .......++..|+|||.+....++.++|+||||+++|||++ |+.||....... .....
T Consensus 158 ~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~------- 224 (279)
T cd05057 158 LLDVDEKE---YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE---IPDLL------- 224 (279)
T ss_pred cccCcccc---eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH---HHHHH-------
Confidence 76532211 01111224568999999988899999999999999999998 999986432211 11100
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcc
Q 009404 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515 (535)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~ 515 (535)
.... ....+......+.+++.+||..+|++||++.++++.|.++..+..
T Consensus 225 ----~~~~----~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05057 225 ----EKGE----RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQ 273 (279)
T ss_pred ----hCCC----CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCc
Confidence 0000 001122223457889999999999999999999999999976544
No 186
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.9e-37 Score=302.71 Aligned_cols=249 Identities=28% Similarity=0.449 Sum_probs=197.5
Q ss_pred cccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCCC
Q 009404 231 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~ 310 (535)
++||+|+||.||++.+.+++.|++|.+...........+.+|++++++++|+||+++++++.+ ....++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQ----KQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec----CCCeEEEEEcCCC
Confidence 469999999999999877999999998765444345568999999999999999999998876 4467999999999
Q ss_pred CCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCCC
Q 009404 311 GNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCS 390 (535)
Q Consensus 311 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 390 (535)
++|.+++.... ..+++..+..++.+++.||+|||+++ ++||||+|+|||++.++.++|+|||++.........
T Consensus 77 ~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~--- 149 (251)
T cd05041 77 GSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT--- 149 (251)
T ss_pred CcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcce---
Confidence 99999996532 45889999999999999999999998 999999999999999999999999999765432211
Q ss_pred CCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccccCCCCC
Q 009404 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469 (535)
Q Consensus 391 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (535)
........+..|+|||.+..+.++.++|+||||+++|||++ |..||........... . .. .
T Consensus 150 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~---~-----------~~----~ 211 (251)
T cd05041 150 VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRER---I-----------ES----G 211 (251)
T ss_pred eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHH---H-----------hc----C
Confidence 11112234567999999988899999999999999999999 7888854332111100 0 00 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.....+...+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 212 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 212 YRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 011122333456899999999999999999999999886
No 187
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=6.7e-38 Score=317.20 Aligned_cols=242 Identities=24% Similarity=0.355 Sum_probs=189.3
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|+||.||+|++. +++.||+|.++.... ......+..|..++... +||||+++++++.+ ....++|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~----~~~~~lv~E 76 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT----KEHLFFVME 76 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe----CCEEEEEEC
Confidence 46999999999999976 488999999975321 12233466777777754 89999999999876 457899999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.++|+|||+++......
T Consensus 77 ~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 150 (316)
T cd05620 77 FLNGGDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD- 150 (316)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCC-
Confidence 99999999998753 45899999999999999999999998 9999999999999999999999999987532211
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ..... +. ..
T Consensus 151 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~---~~~~~-----------~~-~~ 211 (316)
T cd05620 151 ----NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED---ELFES-----------IR-VD 211 (316)
T ss_pred ----CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHH-----------HH-hC
Confidence 1233457899999999999999999999999999999999999999643221 10000 00 00
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMS-EVVQ 505 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-evl~ 505 (535)
.+ ..+...+..+.+++.+||+.||++||++. ++++
T Consensus 212 ~~----~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 212 TP----HYPRWITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred CC----CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 11 11222345588999999999999999984 5653
No 188
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.1e-37 Score=309.86 Aligned_cols=265 Identities=26% Similarity=0.394 Sum_probs=206.5
Q ss_pred eCHHHHHHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeee
Q 009404 215 FSYSALEHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCS 292 (535)
Q Consensus 215 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~ 292 (535)
.++.++..+.+.|+..+.||.|+||.||+|... +++.+|+|.+.... .....+..|+.+++.+ +|+||+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 83 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--DEEEEIKLEINMLKKYSHHRNIATYYGAFI 83 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh--HHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence 355667778889999999999999999999974 48899999986542 2334578899999998 7999999999986
Q ss_pred ecc--cCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcE
Q 009404 293 EFR--GKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNA 370 (535)
Q Consensus 293 ~~~--~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~v 370 (535)
... ......+++|||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+|+||+|+||++++++.+
T Consensus 84 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~ 160 (282)
T cd06636 84 KKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEV 160 (282)
T ss_pred cccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCE
Confidence 432 22457799999999999999997655566889999999999999999999998 9999999999999999999
Q ss_pred EEEecCCccccccCCCCCCCCCCCccccCccccCccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccc
Q 009404 371 KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM-----VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEE 445 (535)
Q Consensus 371 kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~ 445 (535)
+|+|||++....... .......|+..|+|||.+. ...++.++||||||+++|||++|..||.........
T Consensus 161 ~l~dfg~~~~~~~~~-----~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~ 235 (282)
T cd06636 161 KLVDFGVSAQLDRTV-----GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL 235 (282)
T ss_pred EEeeCcchhhhhccc-----cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh
Confidence 999999987654221 1223456889999999875 346788999999999999999999999643221110
Q ss_pred hhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.. +.....+. ......+..+.+++.+||+.||.+|||+.|+++.
T Consensus 236 ~~--------------~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 236 FL--------------IPRNPPPK---LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred hh--------------HhhCCCCC---CcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 00 00000111 1112234558999999999999999999999863
No 189
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.6e-37 Score=309.76 Aligned_cols=252 Identities=27% Similarity=0.365 Sum_probs=197.8
Q ss_pred CCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC--ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP--NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
|+..+.||+|+||+||++.+. +++.||+|.+...... .....+.+|+++|+.++|+||+++.+++.+ +...++
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~----~~~~~l 77 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET----KDALCL 77 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec----CCEEEE
Confidence 556788999999999999875 5889999998654321 223347889999999999999999988875 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05632 78 VLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPE 154 (285)
T ss_pred EEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCC
Confidence 999999999999987654456999999999999999999999998 99999999999999999999999999876532
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
.. ......|+..|+|||.+.+..++.++|+||||+++|||++|..||..............
T Consensus 155 ~~------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~------------- 215 (285)
T cd05632 155 GE------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDR------------- 215 (285)
T ss_pred CC------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-------------
Confidence 21 12234689999999999988999999999999999999999999964322111110000
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT-----MSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~~ 506 (535)
.+... ...++...+..+.+|+.+||+.||++||+ +.++++.
T Consensus 216 ~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 216 RVLET--EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred hhhcc--ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 00000 00122233445788999999999999999 7777764
No 190
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1e-37 Score=307.80 Aligned_cols=251 Identities=27% Similarity=0.445 Sum_probs=196.0
Q ss_pred cccceeCceEEEEEEEcC-------CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 231 NIVGQGGSSYVYRGQLTD-------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~-------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+.||+|+||.||+|+..+ ++.+|+|.+...........+.+|+.+++.++||||+++++++.. ....++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~~ 76 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL----NEPQYI 76 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC----CCCeEE
Confidence 368999999999998653 357999998765434445668999999999999999999999865 345799
Q ss_pred EEecCCCCCHHHhhhhcc-----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-----cEEEE
Q 009404 304 VFEFMPNGNLRDCLDGVL-----VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL-----NAKIT 373 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~-----~vkL~ 373 (535)
||||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||||+||+++.+. .++|+
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~ 153 (269)
T cd05044 77 IMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIG 153 (269)
T ss_pred EEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEEC
Confidence 999999999999996532 233789999999999999999999988 99999999999999877 89999
Q ss_pred ecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhcc
Q 009404 374 DLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWAT 452 (535)
Q Consensus 374 DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~ 452 (535)
|||++......... .......++..|+|||++..+.++.++||||||+++|||++ |+.||...... .......
T Consensus 154 dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~---~~~~~~~ 227 (269)
T cd05044 154 DFGLARDIYKSDYY---RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ---EVLQHVT 227 (269)
T ss_pred Cccccccccccccc---ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH---HHHHHHh
Confidence 99999766433221 11122345678999999999999999999999999999998 99998543221 1111000
Q ss_pred ccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 453 PRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 453 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
.......+...+..+.+++.+||..+|++||++.++++.|++
T Consensus 228 ---------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 228 ---------------AGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ---------------cCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 000011223345568899999999999999999999999863
No 191
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-37 Score=310.00 Aligned_cols=264 Identities=23% Similarity=0.338 Sum_probs=204.1
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
++|+..+.||+|+||+||++... +++.||+|++...........+.+|+++++.++||||+++++++.. ....++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~l 80 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLN----ENNICM 80 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEec----CCEEEE
Confidence 45667789999999999999875 4889999998765544555678999999999999999999999876 357799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHE-AAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
||||+++++|.+++... ..+++.....++.+++.||.|||+ .+ ++|+||+|+||++++++.++|+|||++....
T Consensus 81 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~ 155 (284)
T cd06620 81 CMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELI 155 (284)
T ss_pred EEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchh
Confidence 99999999999998753 458999999999999999999997 45 9999999999999999999999999986553
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
... .....|+..|+|||++....++.++||||||+++|+|++|+.||............. .... ..+
T Consensus 156 ~~~-------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~---~~~~---~~~ 222 (284)
T cd06620 156 NSI-------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDP---MGIL---DLL 222 (284)
T ss_pred hhc-------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhh---hHHH---HHH
Confidence 221 223468899999999988899999999999999999999999997543321100000 0000 000
Q ss_pred ccCCCCCCCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 463 SELPDPRLKGDFP-KEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 463 ~~~~~~~l~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
..+..... ...+ ...+..+.+++.+||+.||++|||+.|++++..-+.
T Consensus 223 ~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 223 QQIVQEPP-PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred HHHhhccC-CCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 00100000 0111 124456889999999999999999999998754443
No 192
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1e-37 Score=301.97 Aligned_cols=277 Identities=23% Similarity=0.323 Sum_probs=205.6
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCC-ccceeeeeeecc--cCcce
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCH-VVPLVGYCSEFR--GKRAM 300 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~n-iv~l~g~~~~~~--~~~~~ 300 (535)
.|...++||+|+||+||+|+.. +|+.||+|+++..... .....-.+|+.+|+.++|+| |+++++++.... +....
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 3444567999999999999865 5899999999866442 22234689999999999999 999999998744 12236
Q ss_pred EEEEEecCCCCCHHHhhhhccc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLV--EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMA 378 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla 378 (535)
.++||||+ .-+|..+++.... ++++...+..++.|+++||+|||+++ |+||||||+||||+++|.+||+|||+|
T Consensus 92 l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchH
Confidence 78999999 5699999987653 46888899999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh-hhcccccc
Q 009404 379 KRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV-LWATPRLQ 456 (535)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~-~~~~~~~~ 456 (535)
+...-. ....+..++|.+|.|||++.+. .|+...||||+|||+.||+++++.|............ ......-.
T Consensus 168 ra~~ip-----~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e 242 (323)
T KOG0594|consen 168 RAFSIP-----MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNE 242 (323)
T ss_pred HHhcCC-----cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCc
Confidence 965432 2335566899999999999876 6999999999999999999998888655432111110 00000001
Q ss_pred CcccccccCCCCCC--CC-----CCCHHH---HHHHHHHHHHhcccCCCCCCCHHHHHHH--HhhhC
Q 009404 457 DSGTVISELPDPRL--KG-----DFPKEE---MQIMAYLAKECLQLDPDARPTMSEVVQI--LSTIA 511 (535)
Q Consensus 457 ~~~~~~~~~~~~~l--~~-----~~~~~~---~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~l~ 511 (535)
+.+..+..+++... .. ...... .....+++.+||+.+|.+|.|+..++++ +..+-
T Consensus 243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP 309 (323)
T ss_pred cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence 11111111111110 00 000111 1357889999999999999999999986 65553
No 193
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.6e-38 Score=304.79 Aligned_cols=256 Identities=24% Similarity=0.278 Sum_probs=205.9
Q ss_pred CCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCC--ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGP--NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
.|...+.||.|.-|+||++++.+ +..+|+|++...... +...+...|.++|+.++||.++.|++.+.. +...+
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet----~~~~c 153 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET----DKYSC 153 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec----cceeE
Confidence 34556889999999999999876 589999999865322 223346789999999999999999999876 56789
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
++||||+||+|...++++..+.+++..+..++..++-||+|||-.| ||+|||||+||||.++|++-|+||.++....
T Consensus 154 l~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~ 230 (459)
T KOG0610|consen 154 LVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCP 230 (459)
T ss_pred EEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCC
Confidence 9999999999999999888888999999999999999999999999 9999999999999999999999999976432
Q ss_pred cCC---------------------------------C------------------CCCCCCCCccccCccccCccccccC
Q 009404 383 ADG---------------------------------L------------------PSCSSSPARMQGTFGYFAPEYAMVG 411 (535)
Q Consensus 383 ~~~---------------------------------~------------------~~~~~~~~~~~gt~~y~aPE~~~~~ 411 (535)
... . .........++||-.|+|||++.+.
T Consensus 231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~ 310 (459)
T KOG0610|consen 231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE 310 (459)
T ss_pred CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecC
Confidence 100 0 0001123447799999999999999
Q ss_pred CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcc
Q 009404 412 RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQ 491 (535)
Q Consensus 412 ~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~ 491 (535)
-.+.++|.|+|||++|||+.|..||.......... .++...+.-....+.+..+.+||++.|.
T Consensus 311 GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~-----------------NIv~~~l~Fp~~~~vs~~akDLIr~LLv 373 (459)
T KOG0610|consen 311 GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLR-----------------NIVGQPLKFPEEPEVSSAAKDLIRKLLV 373 (459)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHH-----------------HHhcCCCcCCCCCcchhHHHHHHHHHhc
Confidence 99999999999999999999999997655442211 1222222111122456668999999999
Q ss_pred cCCCCCCC----HHHHHH
Q 009404 492 LDPDARPT----MSEVVQ 505 (535)
Q Consensus 492 ~dP~~RPt----~~evl~ 505 (535)
+||.+|.. +.||-+
T Consensus 374 KdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 374 KDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred cChhhhhccccchHHhhc
Confidence 99999988 777765
No 194
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-37 Score=310.00 Aligned_cols=250 Identities=26% Similarity=0.409 Sum_probs=200.8
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
.+|+..+.||+|+||.||+|... +++.|++|.+...... ....+.+|+.+++.+.|+||+++++.+.. ....++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~v~~~~~~~~~----~~~~~l 94 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLV----GDELWV 94 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc-hHHHHHHHHHHHHhCCCCCEeeEEEEEEe----CCEEEE
Confidence 46778889999999999999864 5889999999765433 34558899999999999999999998876 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||+++++|.+++.. ..+++.++..++.|++.||+|||+.+ |+|+||||+|||++.++.++|+|||++.....
T Consensus 95 v~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 95 VMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (296)
T ss_pred eecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence 9999999999999864 34789999999999999999999998 99999999999999999999999999876543
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
.. .......+++.|+|||.+....++.++||||||+++|+|++|+.||....... ......
T Consensus 169 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~--~~~~~~------------ 229 (296)
T cd06654 169 EQ-----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--ALYLIA------------ 229 (296)
T ss_pred cc-----cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH--hHHHHh------------
Confidence 21 11223467889999999988889999999999999999999999996433211 110000
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.........+......+.+++.+||..+|++|||+.++++.
T Consensus 230 --~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 230 --TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred --cCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 00000111233445668899999999999999999999984
No 195
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.4e-37 Score=307.83 Aligned_cols=257 Identities=25% Similarity=0.395 Sum_probs=200.8
Q ss_pred cCCCCCcccceeCceEEEEEEEc------CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT------DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKR 298 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 298 (535)
++|+..+.||+|+||.||+|+.+ +.+.|++|.+...........+.+|++++++++|+||+++++++.+ .
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~ 80 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCRE----A 80 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECC----C
Confidence 56778899999999999999864 2467999998765443345668999999999999999999998865 3
Q ss_pred ceEEEEEecCCCCCHHHhhhhccc-------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEE
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVLV-------EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vk 371 (535)
...++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~ 157 (275)
T cd05046 81 EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVK 157 (275)
T ss_pred CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEE
Confidence 456999999999999999975431 15899999999999999999999998 99999999999999999999
Q ss_pred EEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhh
Q 009404 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLW 450 (535)
Q Consensus 372 L~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~ 450 (535)
|+|||++........ .......++..|+|||.+....++.++||||||+++|+|++ |..||....... ....
T Consensus 158 l~~~~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~---~~~~ 230 (275)
T cd05046 158 VSLLSLSKDVYNSEY----YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE---VLNR 230 (275)
T ss_pred EcccccccccCcccc----cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH---HHHH
Confidence 999999875433221 12223356778999999988889999999999999999999 778885332211 1110
Q ss_pred ccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 451 ATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
. .........+...+..+.+++.+||+.+|++|||+.|++..|++
T Consensus 231 ~--------------~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 231 L--------------QAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred H--------------HcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 0 00000011122233458899999999999999999999998863
No 196
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.2e-37 Score=309.05 Aligned_cols=247 Identities=24% Similarity=0.385 Sum_probs=198.3
Q ss_pred CCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~ 305 (535)
|+..+.||+|+||.||+|.+. +++.||+|.+...........+.+|+++++.++||||+++++++.. ....++||
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~ 81 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLK----GTKLWIIM 81 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccccc----CCceEEEE
Confidence 455678999999999999875 4789999998755444445568899999999999999999998875 44679999
Q ss_pred ecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 306 EFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 306 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
||+++++|.+++.. ..+++..+..++.|++.||.|||+++ ++|+||+|+||++++++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 82 EYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 99999999999864 45899999999999999999999998 9999999999999999999999999987664321
Q ss_pred CCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccC
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISEL 465 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
. ......++..|+|||++.+..++.++||||||+++|||++|+.|+....... .... +...
T Consensus 156 ~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~~~~-----------~~~~ 216 (277)
T cd06642 156 I-----KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR---VLFL-----------IPKN 216 (277)
T ss_pred h-----hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh---HHhh-----------hhcC
Confidence 1 1223457889999999998889999999999999999999999985332110 0000 0000
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 466 PDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 466 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..+. .+...+..+.+++.+||+.+|++||++.++++.
T Consensus 217 ~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 217 SPPT----LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CCCC----CCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 1111 222344558899999999999999999999984
No 197
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=5.8e-38 Score=318.61 Aligned_cols=238 Identities=24% Similarity=0.288 Sum_probs=185.4
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHH-HHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVD-MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|+||+||+|+.. +++.||+|++..... ......+..|.. +++.++||||+++++++.+ ....++|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~----~~~~~lv~e 76 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT----ADKLYFVLD 76 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe----CCEEEEEEc
Confidence 36999999999999975 589999999974321 122233455544 5678899999999998875 456799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||++......
T Consensus 77 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-- 149 (323)
T cd05575 77 YVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-- 149 (323)
T ss_pred CCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccC--
Confidence 99999999998753 46899999999999999999999998 999999999999999999999999998754221
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
........||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... .+.
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~-----------------~i~ 209 (323)
T cd05575 150 ---SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYD-----------------NIL 209 (323)
T ss_pred ---CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHH-----------------HHH
Confidence 122334568999999999999999999999999999999999999996432211000 000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMS 501 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 501 (535)
.... ..+...+..+.+++.+||+.||.+||++.
T Consensus 210 ~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 210 NKPL--RLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred cCCC--CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 0000 11122245588999999999999999984
No 198
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5.3e-38 Score=326.37 Aligned_cols=255 Identities=21% Similarity=0.270 Sum_probs=192.8
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
.|+..+.||+|+||+||+|+.. +++.||+|++..... ......+.+|+++++.++||||+++++++.+ ....+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~----~~~~~ 77 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD----KDNLY 77 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe----CCEEE
Confidence 5778899999999999999875 488999999875321 2233457889999999999999999999876 45689
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++..+.
T Consensus 78 lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~ 152 (382)
T cd05625 78 FVMDYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 152 (382)
T ss_pred EEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcccc
Confidence 999999999999999754 45889999999999999999999998 9999999999999999999999999975432
Q ss_pred cCCCC------------------------------------------CCCCCCCccccCccccCccccccCCCCccchHH
Q 009404 383 ADGLP------------------------------------------SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVF 420 (535)
Q Consensus 383 ~~~~~------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVw 420 (535)
..... ..........||+.|+|||++.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Diw 232 (382)
T cd05625 153 WTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWW 232 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEE
Confidence 10000 000011235699999999999988999999999
Q ss_pred HHHHHHHHHHhCCCCCCCccccccchh-hhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 009404 421 SFGVVLLELITGRQPIHRSITKGEESL-VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT 499 (535)
Q Consensus 421 SlGvil~eLltG~~P~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt 499 (535)
||||++|||++|+.||........... ..|. ..+........+..+.+++.+++ .+|.+|++
T Consensus 233 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~----------------~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~ 295 (382)
T cd05625 233 SVGVILYEMLVGQPPFLAQTPLETQMKVINWQ----------------TSLHIPPQAKLSPEASDLIIKLC-RGPEDRLG 295 (382)
T ss_pred echHHHHHHHhCCCCCCCCCHHHHHHHHHccC----------------CCcCCCCcccCCHHHHHHHHHHc-cCHhHcCC
Confidence 999999999999999965332111100 0000 00000011122344667777765 49999987
Q ss_pred ---HHHHHHH
Q 009404 500 ---MSEVVQI 506 (535)
Q Consensus 500 ---~~evl~~ 506 (535)
+.|++++
T Consensus 296 ~~~~~ei~~h 305 (382)
T cd05625 296 KNGADEIKAH 305 (382)
T ss_pred CCCHHHHhcC
Confidence 8888763
No 199
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.6e-37 Score=305.95 Aligned_cols=250 Identities=25% Similarity=0.376 Sum_probs=201.6
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
++|+..+.||.|+||.||+|+.. +++.||+|.+...........+.+|+++++.++|+||+++++++.+ ....++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~~ 76 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK----GSKLWI 76 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE----CCeEEE
Confidence 35777889999999999999976 4899999999765444444568899999999999999999999876 457799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
|+||+++++|.+++... .+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 77 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 150 (274)
T cd06609 77 IMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTS 150 (274)
T ss_pred EEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence 99999999999998753 6899999999999999999999998 99999999999999999999999999987754
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
.. .......++..|+|||++.+..++.++||||||+++|+|++|..||....... ... . +.
T Consensus 151 ~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~---~~~-~----------~~ 211 (274)
T cd06609 151 TM-----SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR---VLF-L----------IP 211 (274)
T ss_pred cc-----cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH---HHH-H----------hh
Confidence 31 12233467889999999998889999999999999999999999996432110 000 0 00
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
....+.+... ..+..+.+++.+||..+|++|||++++++.
T Consensus 212 ~~~~~~~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 212 KNNPPSLEGN---KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred hcCCCCCccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 0011111111 033458889999999999999999999874
No 200
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4e-37 Score=305.33 Aligned_cols=250 Identities=23% Similarity=0.328 Sum_probs=202.8
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
.|+..+.||.|+||.||+|.+. +++.||+|.+...........+.+|+++++.+.||||+++++++.+ ....++|
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv 80 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK----GTKLWII 80 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE----CCEEEEE
Confidence 4666788999999999999975 4889999998765434445568899999999999999999999876 4577999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+++++|.++++. ..+++.....++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 81 MEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred EecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 999999999999864 45889999999999999999999998 999999999999999999999999999776443
Q ss_pred CCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (535)
.. ......++..|+|||++....++.++|+||||+++|||++|..||..........
T Consensus 155 ~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~------------------ 211 (277)
T cd06640 155 QI-----KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF------------------ 211 (277)
T ss_pred cc-----ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh------------------
Confidence 21 1223457888999999988889999999999999999999999986432211000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 465 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
..........+...+..+.+++.+||+.+|++||++.++++.-.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06640 212 LIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKF 255 (277)
T ss_pred hhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChH
Confidence 00001112234455667899999999999999999999987633
No 201
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.9e-37 Score=308.08 Aligned_cols=275 Identities=26% Similarity=0.363 Sum_probs=205.5
Q ss_pred CCCCCcccceeCceEEEEEEEc-----CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-----DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-----~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
.|...+.||+|+||.||++++. ++..+|||.+...........|.+|+++++.+.|+||+++++++.... ...
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~--~~~ 82 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPG--GRS 82 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCC--CCc
Confidence 4566788999999999999864 368899999986544334566999999999999999999999886533 346
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.+++|||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++..
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 799999999999999997643 35899999999999999999999998 99999999999999999999999999987
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
....... ........++..|+|||.+....++.++||||||+++|||++|+.|+............. ........
T Consensus 159 ~~~~~~~--~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~---~~~~~~~~ 233 (284)
T cd05038 159 LPEDKDY--YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGI---AQGQMIVT 233 (284)
T ss_pred cccCCcc--eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccc---ccccccHH
Confidence 7532211 011112234567999999988899999999999999999999999986432211000000 00000000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
.+.+..........+..++..+.+++.+||+.+|++|||+.||+++|+.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 234 RLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 000111111111222333456899999999999999999999999998763
No 202
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.9e-38 Score=326.69 Aligned_cols=256 Identities=20% Similarity=0.275 Sum_probs=194.8
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||.||+++.. +++.||||++.... .......+.+|+++|+.++||||+++++.+.+ ....
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~----~~~~ 76 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD----KDNL 76 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc----CCEE
Confidence 36888899999999999999875 48999999986432 12223457889999999999999999998876 4578
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++..+
T Consensus 77 ~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~ 151 (376)
T cd05598 77 YFVMDYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGF 151 (376)
T ss_pred EEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccc
Confidence 9999999999999999764 45888999999999999999999998 999999999999999999999999997533
Q ss_pred ccCCCC--------------------------------------CCCCCCCccccCccccCccccccCCCCccchHHHHH
Q 009404 382 KADGLP--------------------------------------SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFG 423 (535)
Q Consensus 382 ~~~~~~--------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG 423 (535)
...... ..........||+.|+|||++....++.++||||||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 231 (376)
T cd05598 152 RWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 231 (376)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecc
Confidence 210000 000011235699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCccccccch-hhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC---C
Q 009404 424 VVLLELITGRQPIHRSITKGEES-LVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP---T 499 (535)
Q Consensus 424 vil~eLltG~~P~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP---t 499 (535)
|++|||++|+.||.......... ...|. ..... ......+..+.+++.+|+ .+|.+|+ +
T Consensus 232 vilyell~G~~Pf~~~~~~~~~~~i~~~~-----------~~~~~-----~~~~~~s~~~~~li~~l~-~~p~~R~~~~t 294 (376)
T cd05598 232 VILYEMLVGQPPFLADTPAETQLKVINWE-----------TTLHI-----PSQAKLSREASDLILRLC-CGAEDRLGKNG 294 (376)
T ss_pred ceeeehhhCCCCCCCCCHHHHHHHHhccC-----------ccccC-----CCCCCCCHHHHHHHHHHh-cCHhhcCCCCC
Confidence 99999999999996543221110 00000 00000 011122344667777766 5999999 8
Q ss_pred HHHHHHH
Q 009404 500 MSEVVQI 506 (535)
Q Consensus 500 ~~evl~~ 506 (535)
+.|++++
T Consensus 295 ~~ell~h 301 (376)
T cd05598 295 ADEIKAH 301 (376)
T ss_pred HHHHhCC
Confidence 9999976
No 203
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.7e-38 Score=324.04 Aligned_cols=261 Identities=20% Similarity=0.272 Sum_probs=199.5
Q ss_pred HHHHHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeec
Q 009404 218 SALEHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEF 294 (535)
Q Consensus 218 ~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~ 294 (535)
.+++...++|+..+.||+|+||.||+++.. +++.+|+|++.... .......+.+|+.+++.++||||+++++++.+
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~- 114 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD- 114 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-
Confidence 345556689999999999999999999976 48899999986422 12223447889999999999999999998875
Q ss_pred ccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEe
Q 009404 295 RGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITD 374 (535)
Q Consensus 295 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~D 374 (535)
....++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|
T Consensus 115 ---~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~D 185 (371)
T cd05622 115 ---DRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLAD 185 (371)
T ss_pred ---CCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEe
Confidence 4578999999999999999865 34788899999999999999999998 99999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCCccccCccccCccccccC----CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhh
Q 009404 375 LGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG----RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450 (535)
Q Consensus 375 FGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~ 450 (535)
||++........ .......||+.|+|||.+... .++.++|||||||++|||++|+.||............
T Consensus 186 fG~a~~~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i-- 259 (371)
T cd05622 186 FGTCMKMNKEGM----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI-- 259 (371)
T ss_pred CCceeEcCcCCc----ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHH--
Confidence 999987643321 112345799999999998653 3789999999999999999999999643321110000
Q ss_pred ccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHH
Q 009404 451 ATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDA--RPTMSEVVQIL 507 (535)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~L 507 (535)
.... ..+....+...+..+.+++..||..++.+ |+++.|++++.
T Consensus 260 -----------~~~~--~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 260 -----------MNHK--NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred -----------HcCC--CcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 0000 00000111233455788999999844433 78999999864
No 204
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=9.9e-38 Score=316.91 Aligned_cols=242 Identities=23% Similarity=0.316 Sum_probs=190.1
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccC-CCCccceeeeeeecccCcceE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLH-HCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~~~ 301 (535)
+|+..+.||+|+||.||+++.. +++.||+|++.... .......+..|..++..+. |++|+++.+++.+ ....
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~----~~~~ 76 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT----VDRL 76 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec----CCEE
Confidence 3666789999999999999875 58899999997532 1223345778888888885 5778888888765 4467
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++..
T Consensus 77 ~lv~Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~ 151 (323)
T cd05615 77 YFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEH 151 (323)
T ss_pred EEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEecccccccc
Confidence 9999999999999998654 45899999999999999999999998 999999999999999999999999998754
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
.... .......||+.|+|||++....++.++||||||+++|||++|+.||....... ...
T Consensus 152 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~~------------ 211 (323)
T cd05615 152 MVDG-----VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE---LFQ------------ 211 (323)
T ss_pred CCCC-----ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH---HHH------------
Confidence 3221 12234568999999999998899999999999999999999999996533211 000
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM 500 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 500 (535)
.+.... ...|...+..+.+++.+||+.+|.+|++.
T Consensus 212 --~i~~~~--~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 212 --SIMEHN--VSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred --HHHhCC--CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 000000 11223334558889999999999999984
No 205
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=9.8e-38 Score=317.52 Aligned_cols=250 Identities=23% Similarity=0.295 Sum_probs=192.3
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|+||.||+++.. +++.||+|+++.... ......+.+|+.++.++ +||||+++++++.+ ....++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~----~~~~~lv~e 76 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT----TSRLFLVIE 76 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe----CCEEEEEEe
Confidence 36999999999999875 478999999985432 22334478899999888 79999999998876 446799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||++.......
T Consensus 77 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~- 150 (327)
T cd05617 77 YVNGGDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG- 150 (327)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCC-
Confidence 99999999988653 45999999999999999999999998 9999999999999999999999999987532211
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||.............+.. ..+.
T Consensus 151 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~----------~~~~ 216 (327)
T cd05617 151 ----DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLF----------QVIL 216 (327)
T ss_pred ----CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHH----------HHHH
Confidence 12234568999999999999999999999999999999999999996432211111000000 0000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM------SEVVQI 506 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~------~evl~~ 506 (535)
... ...|...+..+.+++.+||+.||++|+++ .+++++
T Consensus 217 ~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 217 EKP--IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred hCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 000 11233334557889999999999999984 566553
No 206
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.5e-37 Score=304.07 Aligned_cols=257 Identities=25% Similarity=0.387 Sum_probs=199.8
Q ss_pred HHHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCc
Q 009404 220 LEHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKR 298 (535)
Q Consensus 220 l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 298 (535)
++.+++++.....||+|+||.||+|++. +++.|++|.+..... ...+.+.+|+++++.++|+||+++++++.. .
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~ 77 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS-RYVQPLHEEIALHSYLKHRNIVQYLGSDSE----N 77 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH-HHHHHHHHHHHHHHhcCCCCeeeeeeeecc----C
Confidence 4566777777889999999999999865 478899999875432 234468899999999999999999999876 4
Q ss_pred ceEEEEEecCCCCCHHHhhhhcccCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CCcEEEEec
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVLVEGM--NWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE-NLNAKITDL 375 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~-~~~vkL~DF 375 (535)
...++|+||+++++|.+++.... ..+ ++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.++|+||
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~df 153 (268)
T cd06624 78 GFFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDF 153 (268)
T ss_pred CEEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecc
Confidence 56799999999999999997532 234 78888999999999999999998 999999999999976 678999999
Q ss_pred CCccccccCCCCCCCCCCCccccCccccCccccccCC--CCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccc
Q 009404 376 GMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR--ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453 (535)
Q Consensus 376 Gla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~ 453 (535)
|++....... .......++..|+|||++.... ++.++||||||+++|+|++|+.||........ ..+..
T Consensus 154 g~~~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~---~~~~~- 224 (268)
T cd06624 154 GTSKRLAGIN-----PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA---AMFKV- 224 (268)
T ss_pred hhheecccCC-----CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh---hHhhh-
Confidence 9987654321 1122345788999999986543 78999999999999999999999864321110 00000
Q ss_pred cccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 454 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.........+......+.+++.+||+.+|++|||+.|+++.
T Consensus 225 ------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 225 ------------GMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ------------hhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 00001112333445568899999999999999999999874
No 207
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.6e-37 Score=303.45 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=187.1
Q ss_pred ccceeCceEEEEEEEcCC---cEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecC
Q 009404 232 IVGQGGSSYVYRGQLTDG---RIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFM 308 (535)
Q Consensus 232 ~LG~G~fG~Vy~~~~~~g---~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~ 308 (535)
.||+|+||.||+|...++ ..+++|.+...........|.+|+.+++.++||||+++++.+.+ ....++||||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~----~~~~~lv~e~~ 77 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE----AIPYLLVFEYC 77 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC----CCccEEEEecC
Confidence 599999999999976443 35667777655444455679999999999999999999999876 34679999999
Q ss_pred CCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 309 PNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 309 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
++|+|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.++|+|||++........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~ 154 (268)
T cd05086 78 ELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY 154 (268)
T ss_pred CCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchh
Confidence 9999999997542 234677788899999999999999998 99999999999999999999999999864322211
Q ss_pred CCCCCCCCccccCccccCcccccc-------CCCCccchHHHHHHHHHHHHhC-CCCCCCccccccchhhhhccccccCc
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMV-------GRASLMSDVFSFGVVLLELITG-RQPIHRSITKGEESLVLWATPRLQDS 458 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~-------~~~s~ksDVwSlGvil~eLltG-~~P~~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
........++..|+|||++.. ..++.++||||||+++|||+++ ..||....... ..... ..
T Consensus 155 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~---~~~~~---~~-- 223 (268)
T cd05086 155 ---IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE---VLNHV---IK-- 223 (268)
T ss_pred ---hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH---Hh--
Confidence 111223457889999998743 3457899999999999999974 56774322211 00000 00
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.....+.++.+...+ ...+.+++..|| .+|++||++.||++.|.
T Consensus 224 -~~~~~~~~~~~~~~~----~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 224 -DQQVKLFKPQLELPY----SERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred -hcccccCCCccCCCC----cHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 001122233333223 344777899999 67999999999999875
No 208
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.1e-37 Score=311.68 Aligned_cols=261 Identities=27% Similarity=0.447 Sum_probs=202.2
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCc----EEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGR----IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~----~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
++|...+.||+|+||.||+|++. +++ .||+|.+...........+.+|+.+++.++||||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~----- 81 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP----- 81 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-----
Confidence 45677889999999999999864 343 57999887654444444688999999999999999999998642
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..++++||+++|+|.+++... ...+++..+..++.|++.||+|||+++ |+|+||||+|||+++++.+||+|||+++
T Consensus 82 ~~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 82 TIQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred CceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccc
Confidence 347899999999999998753 235889999999999999999999998 9999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDS 458 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... ...+.. .
T Consensus 158 ~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~---~~~~~~-----~ 226 (303)
T cd05110 158 LLEGDEKE---YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---IPDLLE-----K 226 (303)
T ss_pred cccCcccc---cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH-----C
Confidence 76432211 11122345678999999998899999999999999999998 888985432111 111000 0
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcc
Q 009404 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515 (535)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~ 515 (535)
. ... ..+...+..+.+++.+||..+|++||++.++++.|..+..+..
T Consensus 227 ~---~~~-------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 227 G---ERL-------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred C---CCC-------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 0 000 0111223458889999999999999999999999999876644
No 209
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.2e-37 Score=300.80 Aligned_cols=251 Identities=25% Similarity=0.386 Sum_probs=202.3
Q ss_pred hcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
.++|+..+.||+|+||.||+|.+.+ ++.+++|.+..... ...+.+|+++++.++||||+++++++.+ ....+
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~----~~~~~ 74 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFK----NTDLW 74 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeec----CCcEE
Confidence 3578888999999999999999875 78999999875432 4568999999999999999999999876 45679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+++||+++++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++....
T Consensus 75 l~~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~ 150 (256)
T cd06612 75 IVMEYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLT 150 (256)
T ss_pred EEEecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcc
Confidence 999999999999998653 256899999999999999999999998 9999999999999999999999999988764
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
... .......++..|+|||.+.+..++.++||||||+++|+|++|+.||.......... . .
T Consensus 151 ~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~--~------------~ 211 (256)
T cd06612 151 DTM-----AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF--M------------I 211 (256)
T ss_pred cCc-----cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh--h------------h
Confidence 321 11223457889999999988899999999999999999999999986432211100 0 0
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.....+. ...+......+.+++.+||+.||++|||+.|+++.
T Consensus 212 ~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 212 PNKPPPT--LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred ccCCCCC--CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 0000011 11233344568999999999999999999999863
No 210
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.5e-37 Score=307.94 Aligned_cols=267 Identities=26% Similarity=0.360 Sum_probs=205.5
Q ss_pred eCHHHHHHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeee
Q 009404 215 FSYSALEHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCS 292 (535)
Q Consensus 215 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~ 292 (535)
+.+..+..++++|+..+.||+|+||.||++... +++.+|+|.+.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH--DIDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc--chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 344667778899999999999999999999875 48899999886432 2334578899999999 7999999999886
Q ss_pred ecc-cCcceEEEEEecCCCCCHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc
Q 009404 293 EFR-GKRAMRLLVFEFMPNGNLRDCLDGV--LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLN 369 (535)
Q Consensus 293 ~~~-~~~~~~~lV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~ 369 (535)
... ......++||||+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGG 162 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCC
Confidence 432 2345689999999999999988643 2245889999999999999999999998 999999999999999999
Q ss_pred EEEEecCCccccccCCCCCCCCCCCccccCccccCcccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCCcccccc
Q 009404 370 AKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-----GRASLMSDVFSFGVVLLELITGRQPIHRSITKGE 444 (535)
Q Consensus 370 vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~ 444 (535)
++|+|||++........ ......|+..|+|||++.. ..++.++||||||+++|||++|+.||........
T Consensus 163 ~kl~dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~ 237 (286)
T cd06638 163 VKLVDFGVSAQLTSTRL-----RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA 237 (286)
T ss_pred EEEccCCceeecccCCC-----ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH
Confidence 99999999876643221 1223468899999998753 4578899999999999999999999864322110
Q ss_pred chhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 445 ESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
.... .....+.. ..+......+.+++.+||+.||++|||+.|+++.+
T Consensus 238 --~~~~------------~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 238 --LFKI------------PRNPPPTL--HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred --Hhhc------------cccCCCcc--cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0000 00000000 01112234588999999999999999999999864
No 211
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.9e-37 Score=317.61 Aligned_cols=270 Identities=20% Similarity=0.259 Sum_probs=198.7
Q ss_pred HhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeeccc--Cc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG--KR 298 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~--~~ 298 (535)
..++|...+.||+|+||.||++... .++.||||++..... ......+.+|+.+++.++||||+++++++..... ..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999865 488999999975432 2233457889999999999999999998864321 22
Q ss_pred ceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCc
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMA 378 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla 378 (535)
...++||||++ ++|.+++.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 95 ~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 95 QDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCccc
Confidence 35799999996 467777643 4788999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhh---------
Q 009404 379 KRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL--------- 449 (535)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~--------- 449 (535)
+..... .......||..|+|||.+.+..++.++||||||+++|||++|+.||.............
T Consensus 167 ~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (355)
T cd07874 167 RTAGTS------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240 (355)
T ss_pred ccCCCc------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 765432 12234568999999999998899999999999999999999999996432111100000
Q ss_pred -----------hccccccCcccccccCC-CCCC--CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 450 -----------WATPRLQDSGTVISELP-DPRL--KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 450 -----------~~~~~~~~~~~~~~~~~-~~~l--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+................ +... ....+......+.+|+.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000000000000000 0000 001122234568899999999999999999999986
No 212
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=6.7e-37 Score=301.11 Aligned_cols=260 Identities=27% Similarity=0.401 Sum_probs=204.9
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
++|+..+.||.|+||+||+|... ++..+++|++...........+.+|+++++.++|+||+++++.+.. ....++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~i 76 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVV----GDELWL 76 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEee----CCEEEE
Confidence 46888899999999999999865 5889999999765444455668999999999999999999998876 456799
Q ss_pred EEecCCCCCHHHhhhhccc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLV-EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
||||+++++|.++++.... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++....
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~ 153 (267)
T cd06610 77 VMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLA 153 (267)
T ss_pred EEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhc
Confidence 9999999999999976433 46899999999999999999999998 9999999999999999999999999998776
Q ss_pred cCCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
...... ........|+..|+|||.+... .++.++|+||||+++|||++|+.||........ .....
T Consensus 154 ~~~~~~-~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~~~---------- 220 (267)
T cd06610 154 DGGDRT-RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV--LMLTL---------- 220 (267)
T ss_pred cCcccc-ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh--HHHHh----------
Confidence 543211 0122345688999999998877 789999999999999999999999964432210 00000
Q ss_pred cccCCCCCCCCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 462 ISELPDPRLKGDF-PKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 462 ~~~~~~~~l~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.. ..+.+.... ....+..+.+++.+||+.||++|||+.+++++
T Consensus 221 -~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 221 -QN-DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred -cC-CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00 011111111 12344568899999999999999999999874
No 213
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.2e-37 Score=309.91 Aligned_cols=269 Identities=22% Similarity=0.348 Sum_probs=198.7
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
++|...+.||+|+||.||+|+.. +++.||+|.+...........+.+|+.+++.++||||+++++++.. ....++
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~----~~~~~l 81 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT----EKSLTL 81 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEec----CCeEEE
Confidence 45788899999999999999875 4889999999755444444557899999999999999999999875 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||++ ++|.+++... ...+++..+..++.|++.||+|||+.+ |+|+||||+|||+++++.++|+|||++.....
T Consensus 82 v~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 156 (301)
T cd07873 82 VFEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSI 156 (301)
T ss_pred EEeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCC
Confidence 999996 6999988653 245889999999999999999999998 99999999999999999999999999876432
Q ss_pred CCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhc-cccccCc---
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA-TPRLQDS--- 458 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~-~~~~~~~--- 458 (535)
.. .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||............... .......
T Consensus 157 ~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (301)
T cd07873 157 PT-----KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPG 231 (301)
T ss_pred CC-----CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchh
Confidence 21 11223456889999998765 45788999999999999999999999654322111000000 0000000
Q ss_pred ---ccccccCCCCCCCCC----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 459 ---GTVISELPDPRLKGD----FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 459 ---~~~~~~~~~~~l~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
.........+..... .....+..+.+|+.+||+.||.+|||+.|+++.-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~ 287 (301)
T cd07873 232 ILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHP 287 (301)
T ss_pred hhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 000000001111111 1112345588999999999999999999999843
No 214
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.8e-37 Score=317.29 Aligned_cols=271 Identities=23% Similarity=0.264 Sum_probs=198.3
Q ss_pred HhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeeccc--Cc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG--KR 298 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~--~~ 298 (535)
..++|+..+.||+|+||.||++... +++.||||++.... .......+.+|+.+++.++||||+++++++..... ..
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3578899999999999999999875 48999999997542 22334557899999999999999999998864322 12
Q ss_pred ceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCc
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMA 378 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla 378 (535)
...++||||+++ +|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCc
Confidence 356999999964 6766664 34788999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh----------
Q 009404 379 KRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV---------- 448 (535)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~---------- 448 (535)
+..... .......||..|+|||.+.+..++.++||||||+++|||++|+.||............
T Consensus 171 ~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 244 (359)
T cd07876 171 RTACTN------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAE 244 (359)
T ss_pred cccccC------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHH
Confidence 754322 1223356889999999999999999999999999999999999999754321100000
Q ss_pred ----------hhccccccCcccccccCCCCC-C--CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 449 ----------LWATPRLQDSGTVISELPDPR-L--KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 449 ----------~~~~~~~~~~~~~~~~~~~~~-l--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
.+.............+..... . ....+......+.+|+.+||+.||++|||+.|++++-
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 245 FMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 000000000000000000000 0 0001112245588999999999999999999999864
No 215
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=5.8e-37 Score=302.25 Aligned_cols=254 Identities=23% Similarity=0.368 Sum_probs=196.8
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC----ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP----NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
.+|+..+.||+|+||.||+|... ++..|++|++...... .....+.+|+.+++.++||||+++++++.+.. ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 79 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRA--EK 79 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCC--CC
Confidence 36888899999999999999875 4889999998643211 12245788999999999999999999876532 34
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..+++|||+++++|.+++... ..+++.....++.|++.||+|||+.+ |+|+||+|+||++++++.++|+|||++.
T Consensus 80 ~~~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 80 TLTIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 678999999999999999754 45889999999999999999999998 9999999999999999999999999987
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
........ ........++..|+|||.+.+..++.++||||||+++|||++|+.||.........
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~-------------- 218 (266)
T cd06651 155 RLQTICMS--GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAI-------------- 218 (266)
T ss_pred cccccccc--CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHH--------------
Confidence 65432111 11123345789999999999888999999999999999999999999643211100
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
............+......+.+++ .||..+|++||+++|+++
T Consensus 219 ---~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 219 ---FKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ---HHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 000000011223334445567777 688889999999999986
No 216
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.9e-37 Score=321.06 Aligned_cols=271 Identities=24% Similarity=0.280 Sum_probs=197.0
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccC-cceEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGK-RAMRL 302 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~-~~~~~ 302 (535)
+|+..+.||+|+||.||++... +++.||||++..... ......+.+|+++++.++||||+++++++...... ....+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999874 689999999865321 22334588999999999999999999998753311 12679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||+. ++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++....
T Consensus 81 lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999996 6888887543 56899999999999999999999998 9999999999999999999999999998654
Q ss_pred cCCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhc--cccccCc-
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA--TPRLQDS- 458 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~--~~~~~~~- 458 (535)
.... .......++..|+|||.+.+. .++.++|||||||++|||++|+.||............... .+...+.
T Consensus 155 ~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 230 (372)
T cd07853 155 PDES----KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR 230 (372)
T ss_pred cCcc----ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 3221 112334578899999998764 4789999999999999999999999654322111000000 0000000
Q ss_pred ------cccc-ccCCC-CCC--CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 459 ------GTVI-SELPD-PRL--KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 459 ------~~~~-~~~~~-~~l--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
...+ ..... +.. ...........+.+|+.+||+.||++|||+.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000 00000 000 001112224558899999999999999999999975
No 217
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.3e-37 Score=301.87 Aligned_cols=252 Identities=27% Similarity=0.468 Sum_probs=198.3
Q ss_pred cCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
.+|+..+.||+|+||.||++.+.+++.+|+|.+..... ....|.+|+++++.++|||++++++++.. ....++|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~v 77 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM--SEEDFIEEAQVMMKLSHPKLVQLYGVCTE----RSPICLV 77 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC--CHHHHHHHHHHHHhCCCCCeeeEEEEEcc----CCceEEE
Confidence 35667789999999999999987788999999875432 23458999999999999999999998765 3467999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 153 (256)
T cd05112 78 FEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD 153 (256)
T ss_pred EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccC
Confidence 99999999999987532 34889999999999999999999998 999999999999999999999999998765432
Q ss_pred CCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
.. .......++..|+|||.+..+.++.++||||||+++|||++ |..||....... .... +... .
T Consensus 154 ~~----~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~~----~~~~----~ 218 (256)
T cd05112 154 QY----TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE---VVET----INAG----F 218 (256)
T ss_pred cc----cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHH----HhCC----C
Confidence 11 11122335678999999998899999999999999999998 899985432110 0000 0000 0
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.... +...++.+.+|+.+||+.+|++|||+.|+++.|.
T Consensus 219 ~~~~-------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 219 RLYK-------PRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred CCCC-------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 0011 1112355899999999999999999999999873
No 218
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=8.5e-37 Score=310.59 Aligned_cols=270 Identities=21% Similarity=0.315 Sum_probs=194.4
Q ss_pred Cccccee--CceEEEEEEEc-CCcEEEEEEeccCCCCC-hhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEE
Q 009404 230 SNIVGQG--GSSYVYRGQLT-DGRIVAVKRFKTQGGPN-ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 230 ~~~LG~G--~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~ 305 (535)
.++||+| +|++||+++.. +|+.||+|++....... ....+.+|+++++.++||||+++++++.. +...++||
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~----~~~~~lv~ 78 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA----DNELWVVT 78 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE----CCEEEEEE
Confidence 4679999 78999999875 58999999997653322 23446789999999999999999999976 44679999
Q ss_pred ecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 306 EFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 306 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.++++||+.........
T Consensus 79 e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~ 155 (327)
T cd08227 79 SFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHG 155 (327)
T ss_pred eccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcccccc
Confidence 9999999999997654556899999999999999999999998 9999999999999999999999998755432211
Q ss_pred CC--CCCCCCCccccCccccCcccccc--CCCCccchHHHHHHHHHHHHhCCCCCCCccccccc-hhhhhccccccCc--
Q 009404 386 LP--SCSSSPARMQGTFGYFAPEYAMV--GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEE-SLVLWATPRLQDS-- 458 (535)
Q Consensus 386 ~~--~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~-~~~~~~~~~~~~~-- 458 (535)
.. ..........++..|+|||++.. ..++.++||||||+++|||++|+.||......... .......+...+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (327)
T cd08227 156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTT 235 (327)
T ss_pred ccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccc
Confidence 10 00111122356778999999875 45889999999999999999999999643211100 0000000000000
Q ss_pred ---------------------ccccccCC---CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 459 ---------------------GTVISELP---DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 459 ---------------------~~~~~~~~---~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
........ ...............+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 236 IPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred hhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 00000000 0000011222345568899999999999999999999974
No 219
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=7.3e-37 Score=301.23 Aligned_cols=255 Identities=24% Similarity=0.348 Sum_probs=198.8
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCC----CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG----PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
.+|+..+.||+|+||.||+|...+ ++.||||.+..... ......+.+|+.+++.++||||+++++++.+.. ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~ 79 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM--ER 79 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC--Cc
Confidence 467888999999999999998754 89999998864321 122345788999999999999999999876533 23
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..+++|||+++++|.+++... ..+++.....++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.
T Consensus 80 ~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 80 TLSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred eEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcccc
Confidence 578999999999999998754 44788999999999999999999998 9999999999999999999999999988
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
........ ........++..|+|||.+.+..++.++||||||+++|||++|+.||....... ..
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~------------ 218 (265)
T cd06652 155 RLQTICLS--GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA--AI------------ 218 (265)
T ss_pred cccccccc--ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH--HH------------
Confidence 65432111 112233468889999999988889999999999999999999999986432111 00
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.+..........|......+.+++.+||. +|++||+++|+++.
T Consensus 219 ---~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 219 ---FKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred ---HHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 00000011122345556668889999985 99999999999864
No 220
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=7.4e-37 Score=301.27 Aligned_cols=254 Identities=25% Similarity=0.465 Sum_probs=199.2
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCC--------hhHHHHHHHHHHhccCCCCccceeeeeeeccc
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPN--------ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG 296 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~--------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~ 296 (535)
+|...+.||+|+||.||+|... +++.+|+|.+....... ..+.+.+|+++++.++||||+++++++.+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 77 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD--- 77 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe---
Confidence 3566788999999999999874 48899999887543221 12357889999999999999999999876
Q ss_pred CcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecC
Q 009404 297 KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLG 376 (535)
Q Consensus 297 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFG 376 (535)
....+++|||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.++|+|||
T Consensus 78 -~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg 151 (267)
T cd06628 78 -ADHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFG 151 (267)
T ss_pred -CCccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccC
Confidence 34668999999999999999764 45889999999999999999999998 9999999999999999999999999
Q ss_pred CccccccCCCCC-CCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccc
Q 009404 377 MAKRLKADGLPS-CSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455 (535)
Q Consensus 377 la~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~ 455 (535)
+++......... .........|+..|+|||.+....++.++||||||+++|+|++|+.||....... ....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~------ 223 (267)
T cd06628 152 ISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ--AIFK------ 223 (267)
T ss_pred CCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH--HHHH------
Confidence 998775322111 0111223458889999999998889999999999999999999999996432210 0000
Q ss_pred cCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 456 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+.....+ ..+...+..+.+++.+||+.||++||++.|+++.
T Consensus 224 ------~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 224 ------IGENASP----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred ------HhccCCC----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 0011111 2223344568899999999999999999999863
No 221
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=6.7e-37 Score=301.38 Aligned_cols=255 Identities=26% Similarity=0.427 Sum_probs=199.6
Q ss_pred CCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCC-----ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGP-----NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
+|...+.||+|+||+||+|...+++.+|||.+...... .....+.+|+++++.++|+||+++++++.+ ...
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~ 76 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD----DNT 76 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec----CCe
Confidence 46778899999999999999888999999998754221 112347889999999999999999999876 356
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.+++|||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+|+||+|+||++++++.++|+|||++..
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 151 (265)
T cd06631 77 ISIFMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARR 151 (265)
T ss_pred EEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHh
Confidence 79999999999999999754 45889999999999999999999998 99999999999999999999999999886
Q ss_pred cccCCCC-CCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 381 LKADGLP-SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 381 ~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
....... ..........++..|+|||++....++.++||||||+++|+|++|..||......... .... .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~--~~~~-----~-- 222 (265)
T cd06631 152 LAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM--FYIG-----A-- 222 (265)
T ss_pred hhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH--HHhh-----h--
Confidence 5322111 0111223356889999999999888999999999999999999999999643211100 0000 0
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
.....+. .+...+..+.+++.+||+.+|++||++.|+++
T Consensus 223 ---~~~~~~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 223 ---HRGLMPR----LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ---ccCCCCC----CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0001111 22233455889999999999999999999986
No 222
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.1e-37 Score=301.94 Aligned_cols=247 Identities=28% Similarity=0.413 Sum_probs=197.0
Q ss_pred cCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
++|+..+.||+|+||.||++.. +++.||+|.++... ....+.+|+.+++.++|||++++++++.. ...++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~---~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV---TAQAFLEETAVMTKLHHKNLVRLLGVILH-----NGLYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc---hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-----CCcEEE
Confidence 4577789999999999999986 57889999986532 33568899999999999999999998764 235899
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+++++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecccc
Confidence 99999999999997655556899999999999999999999998 999999999999999999999999998754321
Q ss_pred CCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCcccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
......+..|+|||.+....++.++|+||||+++|||++ |+.||........ .... .
T Consensus 154 --------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~---~~~~-----------~ 211 (254)
T cd05083 154 --------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV---KECV-----------E 211 (254)
T ss_pred --------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH---HHHH-----------h
Confidence 112234567999999988899999999999999999998 8889864332110 0000 0
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
. ......+...+..+.+++.+||+.+|++||++.++++.|++
T Consensus 212 ~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 212 K----GYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred C----CCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0 00011122334558899999999999999999999998864
No 223
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=6.1e-37 Score=299.95 Aligned_cols=252 Identities=23% Similarity=0.285 Sum_probs=202.0
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||.|+||.||.++.. +++.+++|.+.... .......+.+|++++++++|+||+++++++.+ ....++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~~ 76 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD----DNTLLI 76 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec----CCeEEE
Confidence 4777899999999999999864 48899999987543 23444568899999999999999999999976 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
+|||+++++|.+++.......+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++.....
T Consensus 77 ~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~ 153 (256)
T cd08221 77 EMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGS 153 (256)
T ss_pred EEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEccc
Confidence 999999999999997654456899999999999999999999998 99999999999999999999999999986644
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
... ......+++.|+|||.+.+..++.++||||||+++|||++|..||.......... .
T Consensus 154 ~~~-----~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~--~-------------- 212 (256)
T cd08221 154 EYS-----MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVV--K-------------- 212 (256)
T ss_pred ccc-----cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHH--H--------------
Confidence 321 2234468899999999988888999999999999999999999986432211000 0
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
+...... ..+...+..+.+++.+||+.+|++||++.++++.+
T Consensus 213 -~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 213 -IVQGNYT-PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred -HHcCCCC-CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 0000000 11123345588999999999999999999999764
No 224
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=6.1e-37 Score=300.01 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=200.3
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||+|++|.||++... +++.||+|++..... ....+.+.+|+++++.++|+|++++++.+.. .....++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~l 77 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG---EDGLLYI 77 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC---CCCEEEE
Confidence 4777899999999999999875 478999999875432 2333458889999999999999999987643 1335789
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
+|||+++++|.+++.......+++.++..++.|++.||++||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 78 v~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~ 154 (257)
T cd08223 78 VMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN 154 (257)
T ss_pred EecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecc
Confidence 999999999999997655556899999999999999999999998 99999999999999999999999999987643
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
.. .......+++.|+|||.+....++.++||||||+++|+|++|+.||........ ..... .
T Consensus 155 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~--~~~~~-----------~ 216 (257)
T cd08223 155 QC-----DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL--VYRII-----------E 216 (257)
T ss_pred cC-----CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHH-----------h
Confidence 22 122345678999999999999999999999999999999999999864321100 00000 0
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
. .. ...+...+..+.+++.+||+.||++|||+.+++++
T Consensus 217 ~-~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 217 G-KL----PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred c-CC----CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 00 11223344568999999999999999999999864
No 225
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=6.7e-37 Score=309.78 Aligned_cols=199 Identities=25% Similarity=0.354 Sum_probs=161.7
Q ss_pred CcccceeCceEEEEEEEc---CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 230 SNIVGQGGSSYVYRGQLT---DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~---~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
.++||+|+||+||+|+.. +++.||+|.+.... ....+.+|+++++.++||||+++++++.... ....+++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHA--DRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC---CcHHHHHHHHHHHhcCCCCCcceeeeEecCC--CcEEEEEEe
Confidence 367999999999999865 46789999987542 2234788999999999999999999886533 346799999
Q ss_pred cCCCCCHHHhhhhcc-------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe----CCCCcEEEEec
Q 009404 307 FMPNGNLRDCLDGVL-------VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL----DENLNAKITDL 375 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl----~~~~~vkL~DF 375 (535)
|++ ++|.+++.... ...+++..+..++.|++.||.|||+++ |+||||||+|||+ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 995 58888875321 124889999999999999999999998 9999999999999 46678999999
Q ss_pred CCccccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCc
Q 009404 376 GMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRS 439 (535)
Q Consensus 376 Gla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~ 439 (535)
|+++........ ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 157 G~a~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 157 GFARLFNSPLKP--LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CceeccCCCCcc--ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 999876443211 122334578999999999876 45899999999999999999999999643
No 226
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=8.6e-38 Score=317.65 Aligned_cols=239 Identities=24% Similarity=0.284 Sum_probs=185.6
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHH-HHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVD-MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|+||+||+++.. +|+.||+|++.... .......+..|.. +++.++||||+++++++.. ....++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~----~~~~~lv~e 76 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT----TEKLYFVLD 76 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec----CCEEEEEEc
Confidence 46999999999999875 58999999997532 1222234555554 5677899999999988876 446799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|..++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 77 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-- 149 (325)
T cd05604 77 FVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-- 149 (325)
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCC--
Confidence 99999999988653 56899999999999999999999998 999999999999999999999999998754221
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
........||+.|+|||.+.+..++.++||||||+++|||++|..||.......... .+.
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~-----------------~~~ 209 (325)
T cd05604 150 ---SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYD-----------------NIL 209 (325)
T ss_pred ---CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHH-----------------HHH
Confidence 122334578999999999999999999999999999999999999996432211000 000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSE 502 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 502 (535)
...+ ..+...+..+.+++.+||+.+|.+||++.+
T Consensus 210 ~~~~--~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 210 HKPL--VLRPGASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred cCCc--cCCCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 0000 011123345788999999999999998753
No 227
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.7e-37 Score=307.71 Aligned_cols=266 Identities=26% Similarity=0.394 Sum_probs=206.0
Q ss_pred eCHHHHHHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeee
Q 009404 215 FSYSALEHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCS 292 (535)
Q Consensus 215 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~ 292 (535)
+++.++..++++|+..+.||+|+||.||++... +++.+|+|.+.... .....+.+|+.+++++ +|||++++++++.
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS--DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc--cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 445667778899999999999999999999874 58899999986532 2334578899999998 8999999999987
Q ss_pred eccc-CcceEEEEEecCCCCCHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc
Q 009404 293 EFRG-KRAMRLLVFEFMPNGNLRDCLDGV--LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLN 369 (535)
Q Consensus 293 ~~~~-~~~~~~lV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~ 369 (535)
.... .....++||||+++++|.++++.. ....+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGG 166 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCC
Confidence 5432 234679999999999999998642 2345899999999999999999999998 999999999999999999
Q ss_pred EEEEecCCccccccCCCCCCCCCCCccccCccccCccccccC-----CCCccchHHHHHHHHHHHHhCCCCCCCcccccc
Q 009404 370 AKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG-----RASLMSDVFSFGVVLLELITGRQPIHRSITKGE 444 (535)
Q Consensus 370 vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~ 444 (535)
+||+|||++........ ......|+..|+|||.+... .++.++||||||+++|||++|+.||.......
T Consensus 167 ~kl~dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~- 240 (291)
T cd06639 167 VKLVDFGVSAQLTSTRL-----RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK- 240 (291)
T ss_pred EEEeecccchhcccccc-----cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH-
Confidence 99999999886643221 11234578899999987543 36899999999999999999999986432211
Q ss_pred chhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 445 ESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
....+. ....+.+ ..+......+.+++.+||+.+|++||++.|++++
T Consensus 241 -~~~~~~------------~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 241 -TLFKIP------------RNPPPTL--LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred -HHHHHh------------cCCCCCC--CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 110000 0000111 1122334568999999999999999999999874
No 228
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.3e-37 Score=323.55 Aligned_cols=264 Identities=20% Similarity=0.264 Sum_probs=194.0
Q ss_pred hcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
..+|.+.+.||+|+||.||++.+.. ++.||||.... ..+.+|+++|++++|+||+++++++.. ....+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~----~~~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVV----GGLTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEE----CCEEE
Confidence 4578899999999999999999864 78899996432 126789999999999999999999876 44679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+|||++ .++|.+++.... ..+++..++.|+.|++.||.|||+++ |+||||||+||||+.++.+||+|||+++...
T Consensus 237 lv~e~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~ 311 (461)
T PHA03211 237 LVLPKY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFAR 311 (461)
T ss_pred EEEEcc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecc
Confidence 999999 479999886532 46999999999999999999999998 9999999999999999999999999998654
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCcccc-cc----chh---hhhcccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITK-GE----ESL---VLWATPR 454 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~-~~----~~~---~~~~~~~ 454 (535)
.... ........||..|+|||++.+..++.++|||||||++|||++|..|+...... .. ..+ .......
T Consensus 312 ~~~~---~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~ 388 (461)
T PHA03211 312 GSWS---TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVH 388 (461)
T ss_pred cccc---cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccc
Confidence 3211 11123456999999999999999999999999999999999988765432211 00 000 0000000
Q ss_pred ccCccc-----ccc-------cCCCCCC-CCCCC--HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 455 LQDSGT-----VIS-------ELPDPRL-KGDFP--KEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 455 ~~~~~~-----~~~-------~~~~~~l-~~~~~--~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
...... ... ....+.. ...+. ......+.+|+.+||+.||.+|||+.|++++
T Consensus 389 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 389 VDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred cccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000000 000 0000000 00000 0122357889999999999999999999985
No 229
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9.3e-37 Score=306.07 Aligned_cols=251 Identities=24% Similarity=0.390 Sum_probs=201.5
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
..+|+..+.||+|+||.||++... +++.||+|.+..... ...+.+.+|+.+++.++|+||+++++++.. ....+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~ 92 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLV----GDELW 92 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEec----CCEEE
Confidence 367888899999999999999864 689999999975443 334558899999999999999999999876 44679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||+++++|.+++.. ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++....
T Consensus 93 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 93 VVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred EeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence 99999999999999864 45889999999999999999999998 9999999999999999999999999987654
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
.... ......+++.|+|||.+....++.++||||||+++|+|++|..||......... .. .
T Consensus 167 ~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~--~~------------~ 227 (297)
T cd06656 167 PEQS-----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL--YL------------I 227 (297)
T ss_pred CCcc-----CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe--ee------------e
Confidence 3321 122345788999999999888999999999999999999999999643221100 00 0
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.....+ ....+...+..+.+++.+||+.+|++||++.++++.
T Consensus 228 ~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 228 ATNGTP--ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred ccCCCC--CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 111233445568899999999999999999999983
No 230
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.2e-37 Score=304.74 Aligned_cols=253 Identities=25% Similarity=0.381 Sum_probs=198.6
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
+|+..+.||+|+||.||++.+. +++.||+|.+...........+.+|++++++++|+||+++++++.. ....++|
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----~~~~~lv 77 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI----EGAVYMC 77 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec----CCeEEEE
Confidence 5777889999999999999986 5899999998754333334568899999999999999999998876 4577999
Q ss_pred EecCCCCCHHHhhhhcc-cCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 305 FEFMPNGNLRDCLDGVL-VEGMNWDTRVAIAIGAARGLEYLHEA-AAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
|||+++++|..+++... ...+++..+..++.|++.||.|||+. + |+|+||||+||+++.++.++|+|||++....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 154 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV 154 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99999999999987532 23689999999999999999999974 5 9999999999999999999999999987653
Q ss_pred cCCCCCCCCCCCccccCccccCccccccC------CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVG------RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
.. ......+++.|+|||.+... .++.++|+||||+++|||++|+.||...........
T Consensus 155 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~--------- 218 (286)
T cd06622 155 AS-------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQ--------- 218 (286)
T ss_pred CC-------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHH---------
Confidence 22 12233578899999988544 358899999999999999999999964322111000
Q ss_pred CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
+..+... .....+...+..+.+++.+||+.+|++||++.+++..-
T Consensus 219 -----~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~ 263 (286)
T cd06622 219 -----LSAIVDG-DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHP 263 (286)
T ss_pred -----HHHHhhc-CCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcCh
Confidence 0001110 01122334556688999999999999999999999853
No 231
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=8e-37 Score=309.06 Aligned_cols=258 Identities=23% Similarity=0.303 Sum_probs=202.1
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCC--hhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPN--ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||.||++...+ ++.+|+|.+....... ....+.+|+++++.++|+||+++++++.+ ....
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~ 76 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT----ETYL 76 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec----CCEE
Confidence 357788999999999999999865 8999999997654332 33458899999999999999999998865 4577
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+.+++|.+++.......+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++...
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 153 (316)
T cd05574 77 CLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQS 153 (316)
T ss_pred EEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcc
Confidence 99999999999999997655566999999999999999999999998 999999999999999999999999998765
Q ss_pred ccCCCCC------------------------CCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCC
Q 009404 382 KADGLPS------------------------CSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437 (535)
Q Consensus 382 ~~~~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~ 437 (535)
....... .........||..|+|||.+.+..++.++||||||+++|+|++|..||.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 233 (316)
T cd05574 154 DVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFK 233 (316)
T ss_pred cccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCC
Confidence 3321100 0011223568899999999998889999999999999999999999996
Q ss_pred CccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC----HHHHHHH
Q 009404 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT----MSEVVQI 506 (535)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt----~~evl~~ 506 (535)
....... .. ++.............+..+.+++.+||..||++||| +.|++.+
T Consensus 234 ~~~~~~~--~~---------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 234 GSNRDET--FS---------------NILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred CCchHHH--HH---------------HHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 4332110 00 000000000111114566899999999999999999 7777763
No 232
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.4e-37 Score=316.19 Aligned_cols=270 Identities=20% Similarity=0.239 Sum_probs=198.5
Q ss_pred HhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeecc--cCc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFR--GKR 298 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--~~~ 298 (535)
..++|...+.||+|+||.||++... .++.||||++.... .......+.+|+.+++.++||||+++++++.... ...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3568899999999999999999865 48899999997543 2233345789999999999999999999875432 123
Q ss_pred ceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCc
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMA 378 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla 378 (535)
...++||||++ ++|.+++.. .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 45799999996 478777743 4788999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhc-------
Q 009404 379 KRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA------- 451 (535)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~------- 451 (535)
+..... .......+|..|+|||.+.+..++.++|||||||++|||++|+.||...............
T Consensus 174 ~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 247 (364)
T cd07875 174 RTAGTS------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE 247 (364)
T ss_pred cccCCC------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 765432 1223456899999999999999999999999999999999999999654321110000000
Q ss_pred -------------cccccCcccccccCCCCCC---CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 452 -------------TPRLQDSGTVISELPDPRL---KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 452 -------------~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..+.........++..... ...........+.+|+.+||+.||++|||+.|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000000000000000 001111223457899999999999999999999985
No 233
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=6e-37 Score=304.87 Aligned_cols=267 Identities=23% Similarity=0.348 Sum_probs=195.8
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||+|++|.||+|+.. +++.||||++...... .....+.+|+.+++.++||||+++++++.+ ....++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~~ 76 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ----ESRLYL 76 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee----CCeEEE
Confidence 4677889999999999999975 5899999998754322 223457889999999999999999999876 446799
Q ss_pred EEecCCCCCHHHhhhhccc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLV-EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
||||++ ++|.+++..... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++....
T Consensus 77 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 152 (285)
T cd07861 77 IFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFG 152 (285)
T ss_pred EEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecC
Confidence 999997 689998865432 45899999999999999999999998 9999999999999999999999999987654
Q ss_pred cCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh----------hhc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV----------LWA 451 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~----------~~~ 451 (535)
... .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||............ .|.
T Consensus 153 ~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (285)
T cd07861 153 IPV-----RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWP 227 (285)
T ss_pred CCc-----ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhh
Confidence 321 11223356889999998765 45789999999999999999999999653321110000 000
Q ss_pred cc-cccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 452 TP-RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 452 ~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.. ...+.............. ......+..+.+++.+||+.||++|||+.++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 228 GVTSLPDYKNTFPKWKKGSLR-SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred cchhhHHHHhhccccCcchhH-HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00 000000000000000000 0011234557899999999999999999999864
No 234
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.2e-36 Score=324.35 Aligned_cols=278 Identities=17% Similarity=0.203 Sum_probs=196.8
Q ss_pred HHHHHHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCC------CCccceee
Q 009404 217 YSALEHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHH------CHVVPLVG 289 (535)
Q Consensus 217 ~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H------~niv~l~g 289 (535)
.+++...+++|.+.++||+|+||+||+|.+. .++.||||+++... .....+..|++++..++| .+++++++
T Consensus 121 ~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 121 GEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--KYTRDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred CCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--hhHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 4455667789999999999999999999875 47899999996432 222335567777766644 45888888
Q ss_pred eeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEeCCCC
Q 009404 290 YCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHE-AAAPRILHRDIKSSNILLDENL 368 (535)
Q Consensus 290 ~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~i~H~DLk~~NILl~~~~ 368 (535)
++... ....++|||++ +++|.+++... ..+++..+..|+.||+.||.|||+ .+ |+||||||+|||++.++
T Consensus 199 ~~~~~---~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~ 269 (467)
T PTZ00284 199 YFQNE---TGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSD 269 (467)
T ss_pred EEEcC---CceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCC
Confidence 87642 34678999988 77899988654 468999999999999999999997 47 99999999999998765
Q ss_pred ----------------cEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhC
Q 009404 369 ----------------NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITG 432 (535)
Q Consensus 369 ----------------~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG 432 (535)
.+||+|||.+..... ......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 270 ~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~--------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG 341 (467)
T PTZ00284 270 TVVDPVTNRALPPDPCRVRICDLGGCCDERH--------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTG 341 (467)
T ss_pred cccccccccccCCCCceEEECCCCccccCcc--------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhC
Confidence 499999998754321 12345789999999999999999999999999999999999
Q ss_pred CCCCCCccccccchhhhhccccccC----------cccccccC--CCCCCC--------C--CC-CHHHHHHHHHHHHHh
Q 009404 433 RQPIHRSITKGEESLVLWATPRLQD----------SGTVISEL--PDPRLK--------G--DF-PKEEMQIMAYLAKEC 489 (535)
Q Consensus 433 ~~P~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~--~~~~l~--------~--~~-~~~~~~~l~~li~~c 489 (535)
+.||..................+.. ........ ..+... . .. .......+.+|+.+|
T Consensus 342 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~m 421 (467)
T PTZ00284 342 KLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGL 421 (467)
T ss_pred CCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHh
Confidence 9999754322111111000000000 00000000 000000 0 00 001134578999999
Q ss_pred cccCCCCCCCHHHHHH--HHhhhCCC
Q 009404 490 LQLDPDARPTMSEVVQ--ILSTIAPD 513 (535)
Q Consensus 490 l~~dP~~RPt~~evl~--~L~~l~~~ 513 (535)
|+.||++|||+.|+++ .|.....+
T Consensus 422 L~~dP~~R~ta~e~L~Hp~~~~~~~~ 447 (467)
T PTZ00284 422 LHYDRQKRLNARQMTTHPYVLKYYPE 447 (467)
T ss_pred CCcChhhCCCHHHHhcCccccccCCc
Confidence 9999999999999998 45544443
No 235
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=7.6e-37 Score=301.02 Aligned_cols=240 Identities=23% Similarity=0.384 Sum_probs=184.6
Q ss_pred cccceeCceEEEEEEEcC-------------CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccC
Q 009404 231 NIVGQGGSSYVYRGQLTD-------------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGK 297 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~-------------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 297 (535)
+.||+|+||.||+|++.+ ...|++|.+.... ......|.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~---- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVR---- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEec----
Confidence 358999999999998532 2358999876543 2334458889999999999999999999876
Q ss_pred cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc-------E
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLN-------A 370 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~-------v 370 (535)
....++||||+++|+|..++... ...+++..++.++.||++||+|||+++ |+||||||+|||++.++. +
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~ 151 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFI 151 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCcee
Confidence 34569999999999999988653 245899999999999999999999998 999999999999987664 8
Q ss_pred EEEecCCccccccCCCCCCCCCCCccccCccccCccccc-cCCCCccchHHHHHHHHHHHH-hCCCCCCCccccccchhh
Q 009404 371 KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELI-TGRQPIHRSITKGEESLV 448 (535)
Q Consensus 371 kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSlGvil~eLl-tG~~P~~~~~~~~~~~~~ 448 (535)
+++|||++...... ....++..|+|||.+. ...++.++||||||+++|||+ +|..|+..........
T Consensus 152 ~l~d~g~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-- 220 (262)
T cd05077 152 KLSDPGIPITVLSR---------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-- 220 (262)
T ss_pred EeCCCCCCccccCc---------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH--
Confidence 99999998654321 2235678899999886 467899999999999999998 4777775322111000
Q ss_pred hhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 449 LWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.+. . ....... ....+.+|+.+||+.||++||++.+|++.|.
T Consensus 221 ~~~------------~--~~~~~~~----~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 221 FYE------------G--QCMLVTP----SCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHh------------c--CccCCCC----ChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 000 0 0000111 1345889999999999999999999998763
No 236
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.8e-37 Score=314.69 Aligned_cols=238 Identities=23% Similarity=0.278 Sum_probs=185.0
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHH-HHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVD-MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
++||+|+||.||+|+.. +++.||+|++.... .......+..|.. +++.++||||+++++++.+ ....++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~----~~~~~lv~e 76 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT----AEKLYFVLD 76 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc----CCEEEEEEc
Confidence 36999999999999975 48899999986432 1122233555554 6788899999999988865 446799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|..++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 77 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-- 149 (321)
T cd05603 77 YVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP-- 149 (321)
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCC--
Confidence 99999999988653 45888999999999999999999998 999999999999999999999999998753221
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
........||+.|+|||.+....++.++|||||||++|||++|..||....... ... .+.
T Consensus 150 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~--------------~i~ 209 (321)
T cd05603 150 ---EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ---MYD--------------NIL 209 (321)
T ss_pred ---CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH---HHH--------------HHh
Confidence 112334568999999999998899999999999999999999999996532110 000 000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMS 501 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 501 (535)
... ...+......+.+++.+||+.||.+||++.
T Consensus 210 ~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 210 HKP--LQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred cCC--CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 000 112223345588999999999999998764
No 237
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6e-37 Score=302.59 Aligned_cols=259 Identities=27% Similarity=0.422 Sum_probs=203.0
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeecc--cC
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFR--GK 297 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~--~~ 297 (535)
.++++|+..+.||+|+||.||+|... +++.+++|++..... ....+.+|+++++++ .|+||+++++++.+.. ..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED--EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 35688999999999999999999985 478999999875532 345688999999999 7999999999987644 23
Q ss_pred cceEEEEEecCCCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEec
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDL 375 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DF 375 (535)
....++||||+++++|.++++... ...+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCC
Confidence 456799999999999999987543 456899999999999999999999998 999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCCccccCccccCcccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhh
Q 009404 376 GMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-----GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450 (535)
Q Consensus 376 Gla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~ 450 (535)
|++....... .......|+..|+|||.+.. ..++.++||||||+++|+|++|..||....... ....
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~- 229 (275)
T cd06608 158 GVSAQLDSTL-----GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR--ALFK- 229 (275)
T ss_pred ccceecccch-----hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH--HHHH-
Confidence 9987654321 12233458889999998753 346789999999999999999999996432111 0000
Q ss_pred ccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 451 ATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+.....+. ...+...+..+.+++.+||..||++|||+.|+++.
T Consensus 230 -----------~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 230 -----------IPRNPPPT--LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred -----------hhccCCCC--CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00000111 11123345668899999999999999999999863
No 238
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.3e-37 Score=321.38 Aligned_cols=265 Identities=20% Similarity=0.253 Sum_probs=196.8
Q ss_pred hcCCCCCcccceeCceEEEEEEEc---CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT---DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~---~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
..+|...+.||+|+||.||++... .+..||||.+.... .+.+|+++|+.++||||+++++++.. ...
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~------~~~~E~~il~~l~h~~iv~~~~~~~~----~~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK------TPGREIDILKTISHRAIINLIHAYRW----KST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc------cHHHHHHHHHhcCCCCccceeeeEee----CCE
Confidence 457889999999999999999754 35789999886432 25689999999999999999998875 446
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++|||++. ++|.+++... ..+++..++.++.|++.||.|||+++ |+||||||+|||++.++.++|+|||++..
T Consensus 161 ~~lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~ 234 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACK 234 (392)
T ss_pred EEEEehhcC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccc
Confidence 799999995 6899988432 56899999999999999999999998 99999999999999999999999999976
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccc------
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPR------ 454 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~------ 454 (535)
...... ........||+.|+|||++....++.++|||||||++|||++|+.||..................
T Consensus 235 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~ 311 (392)
T PHA03207 235 LDAHPD---TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPL 311 (392)
T ss_pred cCcccc---cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCcc
Confidence 544321 11223457999999999999999999999999999999999999999654332111000000000
Q ss_pred -ccC-cc-c---c---cccCCCCCCCC-C--CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 455 -LQD-SG-T---V---ISELPDPRLKG-D--FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 455 -~~~-~~-~---~---~~~~~~~~l~~-~--~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
+.. .. . . ......+.... . ........+.+++.+||..||++|||+.|++.+-
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p 376 (392)
T PHA03207 312 EFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLP 376 (392)
T ss_pred ccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 000 00 0 0 00000000000 0 0011234578899999999999999999999863
No 239
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.5e-37 Score=301.81 Aligned_cols=253 Identities=26% Similarity=0.390 Sum_probs=196.6
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
++|...+.||+|+||.||+|+.. +++.||+|.++.... .....+.+|+.+++.++||||+++++++.. ....++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~----~~~~~l 83 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-EDFAVVQQEIIMMKDCKHSNIVAYFGSYLR----RDKLWI 83 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCeeeEEEEEEe----CCEEEE
Confidence 45666788999999999999875 588999999875532 233457889999999999999999998876 456799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||+++++|.+++... ..+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06645 84 CMEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITA 158 (267)
T ss_pred EEeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccC
Confidence 99999999999998654 46899999999999999999999998 99999999999999999999999999876543
Q ss_pred CCCCCCCCCCCccccCccccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAM---VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
.. .......|+..|+|||++. ...++.++|||||||++|||++|..||.......... ....
T Consensus 159 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~--~~~~-------- 223 (267)
T cd06645 159 TI-----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--LMTK-------- 223 (267)
T ss_pred cc-----cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH--hhhc--------
Confidence 21 1223456889999999874 4568899999999999999999999985433211100 0000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.....+.... ....+..+.+++.+||+.+|++|||+.+++++
T Consensus 224 --~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 224 --SNFQPPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred --cCCCCCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 0000111110 01123458899999999999999999998863
No 240
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.2e-37 Score=321.04 Aligned_cols=257 Identities=22% Similarity=0.309 Sum_probs=194.4
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||.||+++.. +++.||+|++.... .......+.+|+.++..++||||+++++.+.+ ....
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~----~~~~ 76 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD----KRNL 76 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc----CCEE
Confidence 36788899999999999999875 48999999997432 22334457889999999999999999998875 4577
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.++|+|||++...
T Consensus 77 ~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~ 151 (360)
T cd05627 77 YLIMEFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGL 151 (360)
T ss_pred EEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccc
Confidence 9999999999999999753 45899999999999999999999998 999999999999999999999999998755
Q ss_pred ccCCCCC------------------------------CCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh
Q 009404 382 KADGLPS------------------------------CSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431 (535)
Q Consensus 382 ~~~~~~~------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt 431 (535)
....... .........||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~t 231 (360)
T cd05627 152 KKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI 231 (360)
T ss_pred ccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeeccc
Confidence 3211000 0001123569999999999999999999999999999999999
Q ss_pred CCCCCCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 009404 432 GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT---MSEVVQI 506 (535)
Q Consensus 432 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~evl~~ 506 (535)
|+.||............. ... ..+..+ .. ...+..+.+++.+++ .||.+|++ +.|++++
T Consensus 232 G~~Pf~~~~~~~~~~~i~-------~~~---~~~~~p---~~--~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 232 GYPPFCSETPQETYRKVM-------NWK---ETLVFP---PE--VPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCCCCCHHHHHHHHH-------cCC---CceecC---CC--CCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 999996543221110000 000 000000 00 012344677887766 49999985 6777765
No 241
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.6e-37 Score=304.05 Aligned_cols=239 Identities=24% Similarity=0.415 Sum_probs=183.7
Q ss_pred ccceeCceEEEEEEEcC-------------------------CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccc
Q 009404 232 IVGQGGSSYVYRGQLTD-------------------------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVP 286 (535)
Q Consensus 232 ~LG~G~fG~Vy~~~~~~-------------------------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~ 286 (535)
.||+|+||.||+|.+.. ...|++|++..... .....|.+|+.+++.++||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-DIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-HHHHHHHHHHHHHhcCCCCCeee
Confidence 59999999999997521 23589999865432 23345888999999999999999
Q ss_pred eeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 009404 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE 366 (535)
Q Consensus 287 l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~ 366 (535)
+++++.+ ....++||||+++|+|..++... ...+++..+..++.|+++||+|||+++ |+||||||+|||++.
T Consensus 81 ~~~~~~~----~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~ 152 (274)
T cd05076 81 VHGVCVR----GSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLAR 152 (274)
T ss_pred EEEEEEe----CCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEec
Confidence 9999986 34669999999999999998653 245899999999999999999999998 999999999999975
Q ss_pred CC-------cEEEEecCCccccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHH-hCCCCCC
Q 009404 367 NL-------NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELI-TGRQPIH 437 (535)
Q Consensus 367 ~~-------~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLl-tG~~P~~ 437 (535)
++ .+|++|||++...... ....++..|+|||.+.. ..++.++||||||+++|||+ +|..||.
T Consensus 153 ~~~~~~~~~~~kl~d~g~~~~~~~~---------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~ 223 (274)
T cd05076 153 LGLAEGTSPFIKLSDPGVSFTALSR---------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLK 223 (274)
T ss_pred cCcccCccceeeecCCccccccccc---------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCcc
Confidence 43 3899999987644221 12346788999998865 56899999999999999995 6888886
Q ss_pred CccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 438 RSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
........... .. .. ..+......+.+++.+||+.+|++|||+.++++.|.
T Consensus 224 ~~~~~~~~~~~--------------~~--~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 224 ERTPSEKERFY--------------EK--KH----RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ccChHHHHHHH--------------Hh--cc----CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 43322110000 00 00 011111234889999999999999999999999874
No 242
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=9.5e-37 Score=298.27 Aligned_cols=252 Identities=31% Similarity=0.486 Sum_probs=199.6
Q ss_pred CCCCcccceeCceEEEEEEEcC-----CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTD-----GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~-----g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
|+..+.||.|+||.||+++..+ +..||+|++...........+..|+.++..++|+||+++++++.+. ...
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~ 76 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE----EPL 76 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC----Cee
Confidence 3456789999999999999764 3889999997665443556789999999999999999999998763 467
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
+++|||+++++|.+++.......+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++...
T Consensus 77 ~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~ 153 (258)
T smart00219 77 MIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDL 153 (258)
T ss_pred EEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceec
Confidence 99999999999999997654333899999999999999999999998 999999999999999999999999999877
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhccccccCccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
....... .....+++.|+|||.+....++.++||||||+++|+|++ |..||...... .......
T Consensus 154 ~~~~~~~----~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~---~~~~~~~-------- 218 (258)
T smart00219 154 YDDDYYK----KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE---EVLEYLK-------- 218 (258)
T ss_pred ccccccc----cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHh--------
Confidence 6542211 112236789999999988889999999999999999998 77787542211 1100000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
..... ..+...+..+.+++.+||..||++|||+.|+++.|
T Consensus 219 ---~~~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 219 ---KGYRL----PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ---cCCCC----CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 00000 11122345588899999999999999999999864
No 243
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.6e-36 Score=297.81 Aligned_cols=254 Identities=27% Similarity=0.416 Sum_probs=201.8
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
.++|+..+.||+|+||.||++... +++.+++|.+...... ....+.+|+++++.++||||+++++++.+ ....+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~ 76 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD-DFEIIQQEISMLKECRHPNIVAYFGSYLR----RDKLW 76 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh-hHHHHHHHHHHHHhCCCCChhceEEEEEe----CCEEE
Confidence 357888899999999999999875 4788999999865432 44568899999999999999999998876 44679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
++|||+++++|.+++... ...+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++....
T Consensus 77 l~~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 152 (262)
T cd06613 77 IVMEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLT 152 (262)
T ss_pred EEEeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhh
Confidence 999999999999998753 245899999999999999999999998 9999999999999999999999999987654
Q ss_pred cCCCCCCCCCCCccccCccccCccccccC---CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVG---RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
... .......++..|+|||.+... .++.++||||||+++|||++|+.||.......... ...
T Consensus 153 ~~~-----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~--~~~-------- 217 (262)
T cd06613 153 ATI-----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF--LIS-------- 217 (262)
T ss_pred hhh-----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHH--------
Confidence 321 112334678899999998776 88999999999999999999999996533221110 000
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
......+.+ ..+...+..+.+++.+||..+|.+|||+.+++.
T Consensus 218 --~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 218 --KSNFPPPKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred --hccCCCccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000111111 123344566899999999999999999999985
No 244
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.9e-37 Score=306.42 Aligned_cols=250 Identities=25% Similarity=0.400 Sum_probs=200.5
Q ss_pred cCCCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
.+|+..+.||.|+||.||+|.. .+++.|++|.+..... .....+.+|+.+++.++||||+++++++.. ....++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ-PKKELIINEILVMKELKNPNIVNFLDSFLV----GDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC-chHHHHHHHHHHHHhcCCCceeeeeeeEec----CceEEE
Confidence 4577888999999999999986 4589999999975543 334568899999999999999999999876 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
|+||+++++|.+++.. ..+++.++..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 94 v~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 94 VMEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred EEEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 9999999999999864 35899999999999999999999998 99999999999999999999999999886544
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
... ......++..|+|||.+....++.++|||||||++|+|++|+.||.......... ....
T Consensus 168 ~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~--~~~~----------- 229 (296)
T cd06655 168 EQS-----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY--LIAT----------- 229 (296)
T ss_pred ccc-----cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHh-----------
Confidence 321 1223467889999999998889999999999999999999999996543211110 0000
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
...+. ...+...+..+.+++.+||..||++|||+.++++.
T Consensus 230 -~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 230 -NGTPE--LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred -cCCcc--cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000 01122334568889999999999999999999974
No 245
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=337.57 Aligned_cols=269 Identities=26% Similarity=0.408 Sum_probs=216.0
Q ss_pred HHHHHhcCCCCCcccceeCceEEEEEEEcC--------CcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceee
Q 009404 219 ALEHATDKFSGSNIVGQGGSSYVYRGQLTD--------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVG 289 (535)
Q Consensus 219 ~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~--------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g 289 (535)
.++...++....+.||+|.||.|++|.... ...||||+++........+.+..|+++|+.+ +|+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 466666666777799999999999997531 4579999999887776777899999999999 7999999999
Q ss_pred eeeecccCcceEEEEEecCCCCCHHHhhhhcc------------c--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 009404 290 YCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVL------------V--EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHR 355 (535)
Q Consensus 290 ~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~ 355 (535)
+|.. ....++|+||+..|+|.+||+... . ..+...+.+.++.|||.||+||++.. ++||
T Consensus 370 ~~t~----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHR 442 (609)
T KOG0200|consen 370 ACTQ----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHR 442 (609)
T ss_pred eecc----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccch
Confidence 9987 456799999999999999997654 0 12888999999999999999999997 9999
Q ss_pred CCCCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCC
Q 009404 356 DIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQ 434 (535)
Q Consensus 356 DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~ 434 (535)
||.++|||++++..+||+|||+++......+........ . -+..|||||.+....|+.+||||||||+||||+| |..
T Consensus 443 DLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~-~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~ 520 (609)
T KOG0200|consen 443 DLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAG-T-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGT 520 (609)
T ss_pred hhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCC-c-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCC
Confidence 999999999999999999999999776654332111100 0 2456999999999999999999999999999999 778
Q ss_pred CCCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCC
Q 009404 435 PIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513 (535)
Q Consensus 435 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~ 513 (535)
||...... ..+. +...+..+...|..+...++++|+.||+.+|++||++.|+.+.|.....+
T Consensus 521 PYp~~~~~--~~l~---------------~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~~ 582 (609)
T KOG0200|consen 521 PYPGIPPT--EELL---------------EFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQD 582 (609)
T ss_pred CCCCCCcH--HHHH---------------HHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHH
Confidence 88541101 1111 11122223344666677799999999999999999999999999996543
No 246
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=7.2e-37 Score=299.44 Aligned_cols=251 Identities=22% Similarity=0.305 Sum_probs=200.6
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||+|+||.||+++.. +++.||+|++.... .......+.+|+.+++.++||||+++++++.+ ....++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~l 76 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE----NGNLYI 76 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC----CCeEEE
Confidence 4777899999999999999865 58899999987542 22333468899999999999999999998865 457799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+|||++.++.++|+|||++.....
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 77 VMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS 153 (256)
T ss_pred EEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence 999999999999997654456899999999999999999999998 99999999999999999999999999976543
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
... ......|++.|+|||++.+..++.++|+||||+++|+|++|+.||....... ...
T Consensus 154 ~~~-----~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~---~~~-------------- 211 (256)
T cd08218 154 TVE-----LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN---LVL-------------- 211 (256)
T ss_pred chh-----hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH---HHH--------------
Confidence 221 1123457889999999998899999999999999999999999986432111 000
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
++.... ....+...+..+.+++.+||+.+|++||++.+|++.
T Consensus 212 ~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 212 KIIRGS-YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHhcCC-CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 000000 011223344568999999999999999999999974
No 247
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9e-37 Score=311.61 Aligned_cols=255 Identities=24% Similarity=0.285 Sum_probs=211.6
Q ss_pred HhcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCC--hhHHHHHHHHHHhccC-CCCccceeeeeeecccCc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPN--ADSVFLTEVDMLSRLH-HCHVVPLVGYCSEFRGKR 298 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~--~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~ 298 (535)
....|+..+.||+|.||.||+++.+. |+.+|+|.+....... ....+.+|+.+|+++. ||||+.+.+++.+ .
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~----~ 108 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED----P 108 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc----C
Confidence 34567777899999999999999876 9999999998765432 3356899999999997 9999999999987 4
Q ss_pred ceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC----CCcEEEEe
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE----NLNAKITD 374 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~----~~~vkL~D 374 (535)
...++|||++.||.|.+.+... .+++..+..++.|++.+++|||+.+ |+||||||+|+|+.. ++.+|++|
T Consensus 109 ~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~D 182 (382)
T KOG0032|consen 109 DSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLID 182 (382)
T ss_pred CeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEee
Confidence 4779999999999999999765 3999999999999999999999998 999999999999953 34799999
Q ss_pred cCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccc
Q 009404 375 LGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPR 454 (535)
Q Consensus 375 FGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~ 454 (535)
||++...... .......||+.|+|||++....|+...||||+||++|.|++|..||...........+..
T Consensus 183 FGla~~~~~~------~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~---- 252 (382)
T KOG0032|consen 183 FGLAKFIKPG------ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILR---- 252 (382)
T ss_pred CCCceEccCC------ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHc----
Confidence 9999987652 345667899999999999999999999999999999999999999975543221111110
Q ss_pred ccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 455 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.+..+........+..+.++++.++..||.+|+|+.+++++-|
T Consensus 253 -----------~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 253 -----------GDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred -----------CCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 0112233334455777899999999999999999999999755
No 248
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.6e-36 Score=301.20 Aligned_cols=261 Identities=28% Similarity=0.382 Sum_probs=203.1
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
++|...+.||.|++|.||++... +++.+|+|.+...........+.+|+++++.++||||+++++++.+.. ....++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDES--SSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC--CCeEEE
Confidence 35777889999999999999985 488999999986544445566899999999999999999999986543 336799
Q ss_pred EEecCCCCCHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 304 VFEFMPNGNLRDCLDGV--LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
||||+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 99999999999987642 2345889999999999999999999998 999999999999999999999999998765
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCcccc--ccchhhhhccccccCcc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITK--GEESLVLWATPRLQDSG 459 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~--~~~~~~~~~~~~~~~~~ 459 (535)
.... .....++..|+|||.+....++.++||||||+++|+|++|..||...... .......+..
T Consensus 156 ~~~~-------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------- 221 (287)
T cd06621 156 VNSL-------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV------- 221 (287)
T ss_pred cccc-------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh-------
Confidence 4321 12345678899999999889999999999999999999999999754221 0011111100
Q ss_pred cccccCCCCCCCCCCC--HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 460 TVISELPDPRLKGDFP--KEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~--~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
....+.+....+ ...+..+.+++.+||+.+|++|||+.|+++.-.
T Consensus 222 ----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~ 268 (287)
T cd06621 222 ----NMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPW 268 (287)
T ss_pred ----cCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence 000111111111 123456899999999999999999999998543
No 249
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.8e-36 Score=296.87 Aligned_cols=238 Identities=25% Similarity=0.445 Sum_probs=186.8
Q ss_pred cccceeCceEEEEEEEcCCc-----------EEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 231 NIVGQGGSSYVYRGQLTDGR-----------IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g~-----------~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
+.||+|+||.||+|.+.+.. .|++|.+...... ...|.+|+.+++.++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~---- 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVR-D---- 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEec-C----
Confidence 36899999999999986532 5888887654322 4568999999999999999999999875 2
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-------cEEE
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL-------NAKI 372 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~-------~vkL 372 (535)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++ .+||
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl 149 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKL 149 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEe
Confidence 3489999999999999997643 26899999999999999999999998 99999999999999887 7999
Q ss_pred EecCCccccccCCCCCCCCCCCccccCccccCccccccC--CCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhh
Q 009404 373 TDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG--RASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVL 449 (535)
Q Consensus 373 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~ 449 (535)
+|||++...... ....++..|+|||++... .++.++||||||+++|||++ |..||.......... .
T Consensus 150 ~Dfg~a~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~--~ 218 (259)
T cd05037 150 SDPGIPITVLSR---------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER--F 218 (259)
T ss_pred CCCCcccccccc---------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH--H
Confidence 999999865431 123456779999998876 78999999999999999999 466775432211111 0
Q ss_pred hccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 450 WATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
+.. . .....+ ....+.+++.+||..+|++|||+.++++.|+
T Consensus 219 ~~~------~---~~~~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 219 YQD------Q---HRLPMP---------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred Hhc------C---CCCCCC---------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 000 0 000000 0155889999999999999999999999874
No 250
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=6.2e-37 Score=312.17 Aligned_cols=256 Identities=21% Similarity=0.281 Sum_probs=193.0
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||.||+++.. +++.||+|++.... .......+.+|+.++..++|+||+++++++.+ ....
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----~~~~ 76 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD----ENNL 76 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec----CCeE
Confidence 46888899999999999999975 48999999986421 12233457889999999999999999998876 4577
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 77 ~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 152 (331)
T cd05597 77 YLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRL 152 (331)
T ss_pred EEEEecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeec
Confidence 9999999999999999653 345899999999999999999999998 999999999999999999999999998765
Q ss_pred ccCCCCCCCCCCCccccCccccCcccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMV-----GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
..... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||........... ..
T Consensus 153 ~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~-i~------ 221 (331)
T cd05597 153 LADGT----VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK-IM------ 221 (331)
T ss_pred CCCCC----ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHH-HH------
Confidence 43321 11123468999999999863 4578899999999999999999999964322110000 00
Q ss_pred CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCC--CCCCHHHHHHH
Q 009404 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPD--ARPTMSEVVQI 506 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~--~RPt~~evl~~ 506 (535)
... .....+... ...+..+.+++.+|+..+++ .||++.+++++
T Consensus 222 ~~~---~~~~~~~~~----~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 222 NHK---EHFQFPPDV----TDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred cCC---CcccCCCcc----CCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 000 000001111 11334577788887754433 47899999987
No 251
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1e-36 Score=336.90 Aligned_cols=268 Identities=23% Similarity=0.367 Sum_probs=203.2
Q ss_pred HHHHHhcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeeccc
Q 009404 219 ALEHATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG 296 (535)
Q Consensus 219 ~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~ 296 (535)
..+...++|.+.+.||+|+||+||++++.. +..||+|.+..... ......|..|+.+++.++||||+++++++....
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~- 85 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA- 85 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC-
Confidence 345556789999999999999999999754 77899999875432 233456889999999999999999999886533
Q ss_pred CcceEEEEEecCCCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCC----CCeeecCCCCCCEEeCC----
Q 009404 297 KRAMRLLVFEFMPNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLHEAAA----PRILHRDIKSSNILLDE---- 366 (535)
Q Consensus 297 ~~~~~~lV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~----~~i~H~DLk~~NILl~~---- 366 (535)
....+|||||+++|+|.++|.... ...+++..++.|+.||+.||.|||+.+. .+|+||||||+||||+.
T Consensus 86 -~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 86 -NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 346799999999999999997532 2459999999999999999999998542 24999999999999964
Q ss_pred -------------CCcEEEEecCCccccccCCCCCCCCCCCccccCccccCcccccc--CCCCccchHHHHHHHHHHHHh
Q 009404 367 -------------NLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV--GRASLMSDVFSFGVVLLELIT 431 (535)
Q Consensus 367 -------------~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSlGvil~eLlt 431 (535)
...+||+|||++....... ......||+.|+|||++.. ..++.++||||||||||||++
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLT 238 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIES------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS 238 (1021)
T ss_pred cccccccccccCCCCceEEccCCccccccccc------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence 2348999999998664321 1234568999999998854 458899999999999999999
Q ss_pred CCCCCCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHhh
Q 009404 432 GRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ--ILST 509 (535)
Q Consensus 432 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~ 509 (535)
|..||....... .+.. .+...+...+ ...+..+.+|+..||+.+|.+||++.|++. .+..
T Consensus 239 Gk~PF~~~~~~~--qli~-----------~lk~~p~lpi-----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 239 GKTPFHKANNFS--QLIS-----------ELKRGPDLPI-----KGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred CCCCCCcCCcHH--HHHH-----------HHhcCCCCCc-----CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence 999996432211 0000 0000000000 112345889999999999999999999994 4554
Q ss_pred hCC
Q 009404 510 IAP 512 (535)
Q Consensus 510 l~~ 512 (535)
+.+
T Consensus 301 i~~ 303 (1021)
T PTZ00266 301 VGP 303 (1021)
T ss_pred cCC
Confidence 433
No 252
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.6e-36 Score=301.89 Aligned_cols=268 Identities=24% Similarity=0.346 Sum_probs=198.7
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
++|+..+.||+|+||.||+|++. +++.||+|++..... ....+.+.+|+++++.++|+|++++++++.. ....+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~ 76 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR----KRKLH 76 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee----CCEEE
Confidence 36778899999999999999986 489999999875432 2233457899999999999999999999876 44679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||+++++|..++... ..+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++....
T Consensus 77 ~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 151 (286)
T cd07847 77 LVFEYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILT 151 (286)
T ss_pred EEEeccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecC
Confidence 999999998888876543 45899999999999999999999998 9999999999999999999999999998765
Q ss_pred cCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchh-hhhcccccc----
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESL-VLWATPRLQ---- 456 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~-~~~~~~~~~---- 456 (535)
.... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........... .........
T Consensus 152 ~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07847 152 GPGD-----DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQ 226 (286)
T ss_pred CCcc-----cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 4321 1223457788999998865 5578999999999999999999999965432211100 000000000
Q ss_pred --CcccccccCCCCCCCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 457 --DSGTVISELPDPRLKGDFP-----KEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 457 --~~~~~~~~~~~~~l~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
...........+......+ ...+..+.+++.+||+.+|++|||+.|++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 227 IFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred hcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0000000011111110001 1224568899999999999999999999863
No 253
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=5.5e-37 Score=305.31 Aligned_cols=268 Identities=26% Similarity=0.410 Sum_probs=197.9
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
++|+..+.||+|+||.||+|.+++ ++.||+|++...... ...+.+.+|+++++.++||||+++++++.. ....+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~ 76 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR----KKRLY 76 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc----CCeEE
Confidence 367788999999999999999864 899999998754322 234558899999999999999999999865 45679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||+++++|.++.... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++....
T Consensus 77 lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~ 151 (286)
T cd07846 77 LVFEFVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLA 151 (286)
T ss_pred EEEecCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeecc
Confidence 999999999998876542 45899999999999999999999998 9999999999999999999999999987654
Q ss_pred cCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCc---
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS--- 458 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~--- 458 (535)
... .......++..|+|||++.+ ..++.++||||||+++|||++|+.||..................+...
T Consensus 152 ~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07846 152 APG-----EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQE 226 (286)
T ss_pred CCc-----cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHH
Confidence 332 11233457889999998875 457889999999999999999998885432111000000000000000
Q ss_pred ----ccccccCCCCCCCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 459 ----GTVISELPDPRLKG-----DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 459 ----~~~~~~~~~~~l~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.........+.... ......+..+.+++.+||+.+|++||++.++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 227 IFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000000010000 0112335668999999999999999999999864
No 254
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-36 Score=313.55 Aligned_cols=193 Identities=23% Similarity=0.301 Sum_probs=163.6
Q ss_pred HhcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
...+|...+.||+|+||.||+|+... ++.||+|...... ...|+.+++.++||||+++++++.+ ....
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~-------~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~ 132 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT-------TLIEAMLLQNVNHPSVIRMKDTLVS----GAIT 132 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc-------cHHHHHHHHhCCCCCCcChhheEEe----CCee
Confidence 34579999999999999999999764 7789999754321 3578999999999999999999876 4466
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+ .++|.+++... ...+++..+..|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 133 CMVLPHY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred EEEEEcc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 9999999 56899988653 356899999999999999999999998 999999999999999999999999998753
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCC
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIH 437 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~ 437 (535)
... .......||..|+|||++....++.++|||||||++|||+++..|+.
T Consensus 208 ~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 208 VVA------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred ccC------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 321 11234568999999999999999999999999999999999766553
No 255
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.7e-36 Score=299.14 Aligned_cols=253 Identities=21% Similarity=0.339 Sum_probs=196.7
Q ss_pred CCCCCcccceeCceEEEEEEEcC--CcEEEEEEeccCC---------CCChhHHHHHHHHHHhc-cCCCCccceeeeeee
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTD--GRIVAVKRFKTQG---------GPNADSVFLTEVDMLSR-LHHCHVVPLVGYCSE 293 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~--g~~vaVK~l~~~~---------~~~~~~~~~~Ei~~l~~-l~H~niv~l~g~~~~ 293 (535)
+|+..+.||+|+||.||+|.+.. ++.+|+|.+.... .......+..|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36778899999999999999865 7889999886432 11222346778888875 699999999999876
Q ss_pred cccCcceEEEEEecCCCCCHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEeCCCCcE
Q 009404 294 FRGKRAMRLLVFEFMPNGNLRDCLDGV--LVEGMNWDTRVAIAIGAARGLEYLHE-AAAPRILHRDIKSSNILLDENLNA 370 (535)
Q Consensus 294 ~~~~~~~~~lV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~i~H~DLk~~NILl~~~~~v 370 (535)
....+++|||+++++|.+++... ....+++..++.++.|++.||.|||+ .+ ++|+||+|+|||+++++.+
T Consensus 81 ----~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~ 153 (269)
T cd08528 81 ----NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKV 153 (269)
T ss_pred ----CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcE
Confidence 45679999999999999998542 23458999999999999999999996 55 9999999999999999999
Q ss_pred EEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhh
Q 009404 371 KITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450 (535)
Q Consensus 371 kL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~ 450 (535)
+|+|||++....... ......|+..|+|||.+....++.++||||||+++|||++|+.||..........
T Consensus 154 ~l~dfg~~~~~~~~~------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~---- 223 (269)
T cd08528 154 TITDFGLAKQKQPES------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLAT---- 223 (269)
T ss_pred EEecccceeeccccc------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHH----
Confidence 999999998654332 2234567889999999998889999999999999999999999986432211000
Q ss_pred ccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 451 ATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.+.............+..+.+++.+||+.||++||++.|+..++.
T Consensus 224 -------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 224 -------------KIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -------------HHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 000000000001122355889999999999999999999999875
No 256
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.7e-36 Score=296.49 Aligned_cols=250 Identities=25% Similarity=0.362 Sum_probs=198.9
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||+|+||.||++... +++.+|||++.... .......+.+|+++++.++|||++++++.+.. ....++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----~~~~~l 76 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE----DKALMI 76 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec----CCEEEE
Confidence 4777889999999999999875 58899999987543 22334568899999999999999999998765 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-CcEEEEecCCccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN-LNAKITDLGMAKRLK 382 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~-~~vkL~DFGla~~~~ 382 (535)
||||+++++|.+++.......+++..+..++.+++.||+|||+++ ++|+||+|+||+++++ ..++|+|||++....
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (256)
T cd08220 77 VMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILS 153 (256)
T ss_pred EEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecC
Confidence 999999999999998755556899999999999999999999998 9999999999999854 458999999998765
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
... ......++..|+|||.+....++.++||||||+++|+|++|+.||....... ......
T Consensus 154 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~---~~~~~~---------- 214 (256)
T cd08220 154 SKS------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA---LVLKIM---------- 214 (256)
T ss_pred CCc------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH---HHHHHH----------
Confidence 331 1223457889999999998889999999999999999999999985432211 110000
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.. . ....+...+..+.+++.+||+.+|++|||+.|+++.
T Consensus 215 ~~-~----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 215 SG-T----FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred hc-C----CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 00 0 001122234558899999999999999999999864
No 257
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.5e-36 Score=299.28 Aligned_cols=249 Identities=25% Similarity=0.416 Sum_probs=198.2
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccC---CCCccceeeeeeecccCcceE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH---HCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~~~~ 301 (535)
.|+..+.||+|+||.||+|.+. +++.||+|.+...........+.+|+.+++.++ |||++++++++.+ ....
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~----~~~~ 77 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK----GPRL 77 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee----CCEE
Confidence 4667788999999999999974 589999999876544445556889999999986 9999999998875 4467
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++++|.++++. ..+++.....++.|++.||.|||+.+ |+|+||+|+||++++++.++|+|||++...
T Consensus 78 ~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06917 78 WIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALL 151 (277)
T ss_pred EEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeec
Confidence 999999999999999865 36899999999999999999999998 999999999999999999999999999876
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
.... .......|+..|+|||.+..+ .++.++||||||+++|+|++|..||..........
T Consensus 152 ~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~-------------- 212 (277)
T cd06917 152 NQNS-----SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM-------------- 212 (277)
T ss_pred CCCc-----cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh--------------
Confidence 5432 112334688899999988654 46899999999999999999999996432211000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.+.....+.+... ..+..+.+++.+||+.||++||++.|+++.
T Consensus 213 ~~~~~~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 213 LIPKSKPPRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred ccccCCCCCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 0001111111111 133458899999999999999999999874
No 258
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.6e-36 Score=297.70 Aligned_cols=253 Identities=25% Similarity=0.318 Sum_probs=200.9
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||.|+||.||++... +++.+|+|++..... ....+.+..|+++++.++||||+++++++.... ....++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRS--NQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCC--CCEEEE
Confidence 4677889999999999999864 588999999875432 233445888999999999999999999876533 346799
Q ss_pred EEecCCCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHH-----hcCCCCeeecCCCCCCEEeCCCCcEEEEecC
Q 009404 304 VFEFMPNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLH-----EAAAPRILHRDIKSSNILLDENLNAKITDLG 376 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH-----~~~~~~i~H~DLk~~NILl~~~~~vkL~DFG 376 (535)
+|||+++++|.+++.... ...+++..++.++.|++.||.||| +.+ ++|+||+|+||++++++.+||+|||
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g 155 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFG 155 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEeccc
Confidence 999999999999996532 345899999999999999999999 665 9999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccccc
Q 009404 377 MAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 377 la~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
++........ ......++..|+|||.+....++.++|+||||+++|+|++|+.||...... .....
T Consensus 156 ~~~~~~~~~~-----~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~------ 221 (265)
T cd08217 156 LAKILGHDSS-----FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---QLASK------ 221 (265)
T ss_pred ccccccCCcc-----cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---HHHHH------
Confidence 9987654321 122346889999999999888999999999999999999999999643311 11000
Q ss_pred CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+..... ...+...+..+.+++.+||+.+|++|||+.+|+++
T Consensus 222 -----~~~~~~----~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 222 -----IKEGKF----RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -----HhcCCC----CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000111 12233445668999999999999999999999874
No 259
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2e-36 Score=296.17 Aligned_cols=249 Identities=28% Similarity=0.412 Sum_probs=198.4
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC----CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG----PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
+|+..+.||+|+||.||+|... +++.|++|.+..... .+..+.+.+|+.+++.++|+||+++++++.+ ...
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~ 76 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE----EDN 76 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec----CCe
Confidence 3667788999999999999986 689999999865432 2234568899999999999999999998875 446
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.+++|||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.+||+|||++..
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~ 151 (258)
T cd06632 77 LYIFLELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQ 151 (258)
T ss_pred EEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCcccee
Confidence 79999999999999999764 45889999999999999999999998 99999999999999999999999999877
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCC-CCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGR-ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
..... ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||....... ......
T Consensus 152 ~~~~~------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~-------- 215 (258)
T cd06632 152 VVEFS------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA--AVFKIG-------- 215 (258)
T ss_pred ccccc------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH--HHHHHH--------
Confidence 64332 123345788999999987766 8999999999999999999999986433111 000000
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.... ....+......+.+++.+||+.+|++||++.++++.
T Consensus 216 ---~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 216 ---RSKE----LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred ---hccc----CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 0000 011223344558889999999999999999999863
No 260
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.3e-36 Score=302.26 Aligned_cols=252 Identities=23% Similarity=0.361 Sum_probs=196.9
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+.|++.+.||.|+||.||+|+..+ ++.+++|.+.... ......+.+|+.+++.++||||+++++++.. ....++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYMVEIEILATCNHPYIVKLLGAFYW----DGKLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe----CCeEEE
Confidence 557788899999999999999764 8899999987543 2334568899999999999999999998875 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||+++++|..++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++.....
T Consensus 87 v~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 162 (292)
T cd06644 87 MIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK 162 (292)
T ss_pred EEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceeccc
Confidence 999999999998876532 45899999999999999999999998 99999999999999999999999999875432
Q ss_pred CCCCCCCCCCCccccCccccCccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAM-----VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS 458 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
.. .......+++.|+|||++. ...++.++||||||+++|||++|..||....... ......
T Consensus 163 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~~~------- 228 (292)
T cd06644 163 TL-----QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--VLLKIA------- 228 (292)
T ss_pred cc-----cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH--HHHHHh-------
Confidence 21 1123345788999999884 3456889999999999999999999985432110 000000
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
....+.. ..+...+..+.+++.+||+.||++||++.|+++.
T Consensus 229 -----~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 229 -----KSEPPTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred -----cCCCccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000111 1122334558889999999999999999999874
No 261
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.9e-37 Score=302.49 Aligned_cols=254 Identities=30% Similarity=0.482 Sum_probs=196.7
Q ss_pred CCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhH-HHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADS-VFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~-~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
|+..+.||+|+||+||+++... ++.+|+|.+.......... ...+|+.+++.++||||+++++++.+ ....++|
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~----~~~~~~v 76 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD----DNYLYIV 76 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE----SSEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc----ccccccc
Confidence 4556889999999999999865 6789999998764322221 23569999999999999999999887 5567899
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+++++|.+++.. ...+++..+..++.|+++||.+||+.+ ++|+||||+||++++++.++|+|||.+......
T Consensus 77 ~~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~ 151 (260)
T PF00069_consen 77 MEYCPGGSLQDYLQK--NKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSEN 151 (260)
T ss_dssp EEEETTEBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTST
T ss_pred ccccccccccccccc--ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence 999999999999983 256899999999999999999999998 999999999999999999999999999764111
Q ss_pred CCCCCCCCCCccccCccccCccccc-cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
........++..|+|||.+. ...++.++||||+|+++|+|++|..||..................
T Consensus 152 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~--------- 217 (260)
T PF00069_consen 152 -----NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKR--------- 217 (260)
T ss_dssp -----TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHT---------
T ss_pred -----ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc---------
Confidence 12234456889999999998 888999999999999999999999999755111111111000000
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
...... .........+.+++.+||+.||++||++.++++.
T Consensus 218 ~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 218 PLPSSS---QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHHHT---TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred cccccc---cccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000000 0000012569999999999999999999999863
No 262
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=4.4e-37 Score=313.38 Aligned_cols=256 Identities=20% Similarity=0.263 Sum_probs=194.0
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||.||+++.++ ++.+|+|++.... .......+.+|+.++..++|+||+++++++.+ ....
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----~~~~ 76 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD----ENNL 76 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec----CCEE
Confidence 367888999999999999999764 7889999986421 12223347889999999999999999998875 4567
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 77 ~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~ 152 (332)
T cd05623 77 YLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKL 152 (332)
T ss_pred EEEEeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheec
Confidence 9999999999999999753 245899999999999999999999998 999999999999999999999999998765
Q ss_pred ccCCCCCCCCCCCccccCccccCccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAM-----VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||............ .
T Consensus 153 ~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i-------~ 221 (332)
T cd05623 153 MEDGT----VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI-------M 221 (332)
T ss_pred ccCCc----ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHH-------h
Confidence 43221 1122356899999999886 346789999999999999999999999643221110000 0
Q ss_pred CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 009404 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDA--RPTMSEVVQI 506 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~ 506 (535)
... .....+. .....+..+.+++.+|+..++++ |+++.|++++
T Consensus 222 ~~~---~~~~~p~----~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 222 NHK---ERFQFPA----QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCC---ccccCCC----ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 000 0000111 11223455788888888654444 7899999876
No 263
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=8.7e-37 Score=303.69 Aligned_cols=267 Identities=22% Similarity=0.313 Sum_probs=194.3
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||+|+||.||+|+.. +|+.||+|+++.... ......+.+|+++++.++||||+++++++.+ ....++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~----~~~~~l 76 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHS----DKKLTL 76 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhcc----CCceEE
Confidence 4677789999999999999975 589999999975432 2223447789999999999999999998875 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
|+||++ ++|.+++... ...+++..+..++.||++||.|||+++ |+||||||+||+++.++.++|+|||++.....
T Consensus 77 v~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 151 (284)
T cd07839 77 VFEYCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGI 151 (284)
T ss_pred EEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCC
Confidence 999996 5888887653 245899999999999999999999998 99999999999999999999999999876543
Q ss_pred CCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhh--ccccccCccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW--ATPRLQDSGT 460 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~--~~~~~~~~~~ 460 (535)
.. .......++..|+|||.+.+. .++.++||||||+++|||++|+.|+.......+...... ..........
T Consensus 152 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (284)
T cd07839 152 PV-----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWP 226 (284)
T ss_pred CC-----CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhH
Confidence 21 112234578899999988764 468999999999999999999998754322111000000 0000000000
Q ss_pred ccccCCCCC----CC-----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 461 VISELPDPR----LK-----GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 461 ~~~~~~~~~----l~-----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.+....+.. .. .......+..+.+++.+||+.||.+|||+.|++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 227 GVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred HhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 000000000 00 01111234568899999999999999999999864
No 264
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.8e-36 Score=306.37 Aligned_cols=198 Identities=25% Similarity=0.354 Sum_probs=160.5
Q ss_pred cccceeCceEEEEEEEcC---CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEec
Q 009404 231 NIVGQGGSSYVYRGQLTD---GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~---g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
.+||+|+||+||+|+..+ +..||+|.+.... ....+.+|+++++.++||||+++++++.... ....++||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG---ISMSACREIALLRELKHPNVIALQKVFLSHS--DRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC---CcHHHHHHHHHHHhCCCCCeeeEEEEEeccC--CCeEEEEEee
Confidence 579999999999998753 5789999987542 2234788999999999999999999986533 3467999999
Q ss_pred CCCCCHHHhhhhc-------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe----CCCCcEEEEecC
Q 009404 308 MPNGNLRDCLDGV-------LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL----DENLNAKITDLG 376 (535)
Q Consensus 308 ~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl----~~~~~vkL~DFG 376 (535)
++ ++|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+|||+ ++++.+||+|||
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 86 5888877432 1224889999999999999999999998 9999999999999 567789999999
Q ss_pred CccccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCc
Q 009404 377 MAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRS 439 (535)
Q Consensus 377 la~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~ 439 (535)
+++........ ........||+.|+|||.+.+ ..++.++||||||+++|||+||+.||...
T Consensus 158 ~a~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 158 FARLFNSPLKP--LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCccc--ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 99876543211 112234568999999998876 45799999999999999999999999643
No 265
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.4e-36 Score=298.57 Aligned_cols=256 Identities=25% Similarity=0.438 Sum_probs=195.7
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC--C-------hhHHHHHHHHHHhccCCCCccceeeeeeecc
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP--N-------ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFR 295 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~--~-------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~ 295 (535)
+|...+.||.|+||.||+|... +++.||+|.++..... . ..+.+.+|+.+++.++|||++++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-- 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--
Confidence 4666789999999999999864 5899999988642111 0 12347789999999999999999998875
Q ss_pred cCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEec
Q 009404 296 GKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDL 375 (535)
Q Consensus 296 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DF 375 (535)
....++||||+++++|.++++.. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+||
T Consensus 80 --~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~ 152 (272)
T cd06629 80 --EEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDF 152 (272)
T ss_pred --CCceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeec
Confidence 34679999999999999999765 46899999999999999999999998 999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCCccccCccccCccccccCC--CCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccc
Q 009404 376 GMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR--ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453 (535)
Q Consensus 376 Gla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~ 453 (535)
|++........ ........++..|+|||.+.... ++.++|+||||+++|||++|..||....... ......
T Consensus 153 ~~~~~~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~-- 225 (272)
T cd06629 153 GISKKSDDIYD---NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA--AMFKLG-- 225 (272)
T ss_pred ccccccccccc---ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH--HHHHhh--
Confidence 99876543211 11123356889999999987654 7899999999999999999999985322110 000000
Q ss_pred cccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 454 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.....+..........+..+.+++.+||+.+|++|||+.+++++
T Consensus 226 ---------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 226 ---------NKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ---------ccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 00001111111122334568899999999999999999999874
No 266
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.5e-36 Score=298.48 Aligned_cols=261 Identities=24% Similarity=0.356 Sum_probs=198.3
Q ss_pred CCCCcccceeCceEEEEEEEc----CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccC--cc
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT----DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGK--RA 299 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~----~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~--~~ 299 (535)
|...+.||+|+||.||+|.+. +++.||||++..... ....+.+.+|+++++.++||||+++++++...... ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456788999999999999864 368899999976432 22344588999999999999999999988654322 12
Q ss_pred eEEEEEecCCCCCHHHhhhhcc----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEec
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVL----VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDL 375 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DF 375 (535)
..++++||+++|+|.+++.... ...+++.....++.|++.||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 4578999999999998874321 124789999999999999999999998 999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhcccc
Q 009404 376 GMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPR 454 (535)
Q Consensus 376 Gla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~ 454 (535)
|+++........ .......+++.|++||.+....++.++||||||+++|||++ |+.||...... ....+..
T Consensus 158 g~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~---~~~~~~~-- 229 (273)
T cd05074 158 GLSKKIYSGDYY---RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS---EIYNYLI-- 229 (273)
T ss_pred cccccccCCcce---ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH---HHHHHHH--
Confidence 999866432211 11112335678999999998889999999999999999999 78887543221 1111000
Q ss_pred ccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 455 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
..... ..+...+..+.+++.+||+.+|++||++.|+++.|+.+.
T Consensus 230 ---------~~~~~----~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~~ 273 (273)
T cd05074 230 ---------KGNRL----KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELIW 273 (273)
T ss_pred ---------cCCcC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 00000 011223356899999999999999999999999998763
No 267
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.4e-38 Score=290.11 Aligned_cols=265 Identities=28% Similarity=0.394 Sum_probs=208.8
Q ss_pred HHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCCh-------hHHHHHHHHHHhcc-CCCCccceeeee
Q 009404 221 EHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNA-------DSVFLTEVDMLSRL-HHCHVVPLVGYC 291 (535)
Q Consensus 221 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~-------~~~~~~Ei~~l~~l-~H~niv~l~g~~ 291 (535)
+...++|...+.||+|..++|-+...+ .|...|+|++........ .+.-.+|+.+|+++ -||+|+.+.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 445577888899999999999988765 488899999875432211 12245799999999 699999999998
Q ss_pred eecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEE
Q 009404 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371 (535)
Q Consensus 292 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vk 371 (535)
.. +...++|+|.|+.|-|+|+|... -.+++....+|+.|+..|++|||.++ |+||||||+|||+|++.++|
T Consensus 93 es----~sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~ 163 (411)
T KOG0599|consen 93 ES----DAFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIK 163 (411)
T ss_pred cC----cchhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceE
Confidence 76 56789999999999999999764 45899999999999999999999998 99999999999999999999
Q ss_pred EEecCCccccccCCCCCCCCCCCccccCccccCcccccc------CCCCccchHHHHHHHHHHHHhCCCCCCCccccccc
Q 009404 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV------GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEE 445 (535)
Q Consensus 372 L~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~ 445 (535)
|+|||++..+..+ .......||++|+|||.+.. ..|+...|+|+.|||+|.|+.|.+||.....-
T Consensus 164 isDFGFa~~l~~G------ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm--- 234 (411)
T KOG0599|consen 164 ISDFGFACQLEPG------EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM--- 234 (411)
T ss_pred EeccceeeccCCc------hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH---
Confidence 9999999988764 34567899999999998852 34789999999999999999999999532111
Q ss_pred hhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhhhCCCcc
Q 009404 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI--LSTIAPDKS 515 (535)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~l~~~~~ 515 (535)
. ....+.+. ...+..+-..+.+....+|+.+||+.||.+|.|++|++.+ +..+++...
T Consensus 235 --l--MLR~ImeG--------kyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~~~ 294 (411)
T KOG0599|consen 235 --L--MLRMIMEG--------KYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQQA 294 (411)
T ss_pred --H--HHHHHHhc--------ccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHhcc
Confidence 0 00000000 1112223334556678899999999999999999999974 444544433
No 268
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.7e-36 Score=301.53 Aligned_cols=252 Identities=24% Similarity=0.337 Sum_probs=195.8
Q ss_pred CCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~ 305 (535)
|+..+.||+|+||.||+|.... +..+++|.+.... ......+.+|+++++.++|||++++++++.. ....++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~----~~~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYY----ENNLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-HHHHHHHHHHHHHHHHCCCCCeeeEEEEEee----CCEEEEEE
Confidence 4566889999999999999764 7788999886543 2334558899999999999999999999876 44679999
Q ss_pred ecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 306 EFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 306 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
||+++++|..++... ...+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.++|+|||++.......
T Consensus 82 e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 82 EFCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 157 (282)
T ss_pred EecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc
Confidence 999999999988653 246899999999999999999999998 9999999999999999999999999987654321
Q ss_pred CCCCCCCCCccccCccccCccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAM-----VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
.......++..|+|||++. ...++.++|||||||++|||++|+.||........ .....
T Consensus 158 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~~~--------- 221 (282)
T cd06643 158 -----QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV--LLKIA--------- 221 (282)
T ss_pred -----cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH--HHHHh---------
Confidence 1223356889999999874 34578899999999999999999999864322110 00000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
....+.+ ..+...+..+.+++.+||+.||++||++.+++++-.
T Consensus 222 ---~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 264 (282)
T cd06643 222 ---KSEPPTL--AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF 264 (282)
T ss_pred ---hcCCCCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence 0000000 112223455889999999999999999999987543
No 269
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.7e-36 Score=298.27 Aligned_cols=253 Identities=28% Similarity=0.401 Sum_probs=201.6
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
+|+..+.||+|+||.||++.+. +++.+|+|++...........+.+|+++++.++||||+++++++.. ....+++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----~~~~~lv 77 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYN----NGDISIC 77 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeec----CCEEEEE
Confidence 5677788999999999999986 5899999999876544555668999999999999999999999876 3577999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHE-AAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
+||+++++|.+++.... ..+++.....++.|++.||+|||+ .+ ++|+||+|+||++++++.++|+|||.+.....
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~ 153 (265)
T cd06605 78 MEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN 153 (265)
T ss_pred EEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHH
Confidence 99999999999997643 568999999999999999999999 77 99999999999999999999999999876543
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
... ....++..|+|||.+.+..++.++||||||+++|+|++|+.||.......... ...... ..
T Consensus 154 ~~~-------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~--------~~ 217 (265)
T cd06605 154 SLA-------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGI-FELLQY--------IV 217 (265)
T ss_pred HHh-------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccH-HHHHHH--------Hh
Confidence 211 11567889999999998899999999999999999999999986432111110 000000 00
Q ss_pred cCCCCCCCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 464 ELPDPRLKGDFPKE-EMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
....+. .+.. .+..+.+++.+||..||++|||+.|++..
T Consensus 218 ~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 218 NEPPPR----LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred cCCCCC----CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 001111 1111 45558899999999999999999999864
No 270
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=5.2e-37 Score=301.26 Aligned_cols=240 Identities=23% Similarity=0.403 Sum_probs=185.5
Q ss_pred cccceeCceEEEEEEEcC--------CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 231 NIVGQGGSSYVYRGQLTD--------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~--------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
+.||+|+||.||+|.... ...|++|.+.... ....+.+.+|+.+++.++|||++++++++.. ....+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~----~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVC----GDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEe----CCCcE
Confidence 369999999999998642 2348888876432 2334568889999999999999999999876 33568
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc--------EEEEe
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLN--------AKITD 374 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~--------vkL~D 374 (535)
+||||+++|+|.++++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. ++++|
T Consensus 76 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d 151 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSD 151 (258)
T ss_pred EEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecc
Confidence 9999999999999997643 35899999999999999999999998 999999999999987765 69999
Q ss_pred cCCccccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCC-CCCCCccccccchhhhhcc
Q 009404 375 LGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGR-QPIHRSITKGEESLVLWAT 452 (535)
Q Consensus 375 FGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~-~P~~~~~~~~~~~~~~~~~ 452 (535)
||++..... .....++..|+|||++.. ..++.++||||||+++|||++|. .|+.......... ..
T Consensus 152 ~g~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~--~~-- 218 (258)
T cd05078 152 PGISITVLP---------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ--FY-- 218 (258)
T ss_pred cccccccCC---------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH--HH--
Confidence 998865432 123457788999999876 45799999999999999999985 5543222111000 00
Q ss_pred ccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 453 PRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 453 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.. . ...|......+.+++.+||+.||++|||++++++.|+
T Consensus 219 ----------~~--~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 219 ----------ED--R----HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ----------Hc--c----ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 0 0122222345889999999999999999999999874
No 271
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.7e-36 Score=299.34 Aligned_cols=247 Identities=23% Similarity=0.386 Sum_probs=198.3
Q ss_pred CCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~ 305 (535)
|+..+.||+|+||.||+|... +++.||+|.+...........+.+|+++++.++||||+++++++.+ +...++||
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~ 81 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK----DTKLWIIM 81 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe----CCeEEEEE
Confidence 566788999999999999864 5889999998755444444568899999999999999999999876 44679999
Q ss_pred ecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 306 EFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 306 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
||+++++|.+++.. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 82 EYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 99999999999864 35899999999999999999999998 9999999999999999999999999987654321
Q ss_pred CCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccC
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISEL 465 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
. ......++..|+|||.+....++.++|+||||+++|+|++|..||....... .... +...
T Consensus 156 ~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---~~~~-----------~~~~ 216 (277)
T cd06641 156 I-----KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK---VLFL-----------IPKN 216 (277)
T ss_pred h-----hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH---HHHH-----------HhcC
Confidence 1 1223457889999999988889999999999999999999999985432110 0000 0000
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 466 PDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 466 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..+. .+...+..+.+++.+||+.+|++||++.+++++
T Consensus 217 ~~~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 217 NPPT----LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCCC----CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0111 122334558889999999999999999999995
No 272
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.8e-36 Score=295.53 Aligned_cols=256 Identities=25% Similarity=0.443 Sum_probs=200.8
Q ss_pred CCCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCCCC-----ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 226 KFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGP-----NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
+|+..+.||+|++|.||++.. .+++.||+|.+...... .....+.+|+++++.++|+||+++++++.+ ..
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~ 76 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE----DS 76 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc----CC
Confidence 477788999999999999986 45899999998743311 123458899999999999999999999875 44
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-cEEEEecCCc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL-NAKITDLGMA 378 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~-~vkL~DFGla 378 (535)
..++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++ .++|+|||++
T Consensus 77 ~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~ 151 (268)
T cd06630 77 HFNLFVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAA 151 (268)
T ss_pred eEEEEEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccc
Confidence 679999999999999999754 45889999999999999999999998 99999999999998775 5999999999
Q ss_pred cccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCc
Q 009404 379 KRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS 458 (535)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
.......... ........++..|+|||.+....++.++||||||+++|+|++|..||............
T Consensus 152 ~~~~~~~~~~-~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~---------- 220 (268)
T cd06630 152 ARLAAKGTGA-GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALI---------- 220 (268)
T ss_pred cccccccccC-CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHH----------
Confidence 8775432111 11223346889999999998888999999999999999999999998643221111100
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
.+..........+......+.+++.+||+.+|++|||+.|+++
T Consensus 221 ----~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 221 ----FKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ----HHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0000111112344455667899999999999999999999986
No 273
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.5e-37 Score=312.54 Aligned_cols=256 Identities=19% Similarity=0.265 Sum_probs=194.0
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|...+.||+|+||+||+++.. +++.||+|.+.... .......+.+|+.++..++|+||+++++++.+ ....
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~----~~~~ 76 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD----ENYL 76 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc----CCEE
Confidence 46888899999999999999976 47899999986421 12223347889999999999999999998876 4577
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++|+|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 77 ~lv~Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~ 152 (331)
T cd05624 77 YLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKM 152 (331)
T ss_pred EEEEeCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeec
Confidence 9999999999999999753 245899999999999999999999998 999999999999999999999999999766
Q ss_pred ccCCCCCCCCCCCccccCccccCcccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMV-----GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
..... .......||+.|+|||++.. +.++.++||||||+++|||++|+.||.............
T Consensus 153 ~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~------- 221 (331)
T cd05624 153 NQDGT----VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM------- 221 (331)
T ss_pred cCCCc----eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHH-------
Confidence 44321 11223568999999998865 567889999999999999999999996432211000000
Q ss_pred CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 009404 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDA--RPTMSEVVQI 506 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~ 506 (535)
... ....-+... ...+..+.+++.+|+..++++ |+++++++++
T Consensus 222 ~~~---~~~~~p~~~----~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 222 NHE---ERFQFPSHI----TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred cCC---CcccCCCcc----ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 000 000001111 123455788899998865544 4688888765
No 274
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.2e-36 Score=311.60 Aligned_cols=269 Identities=22% Similarity=0.301 Sum_probs=196.8
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeeccc--C
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG--K 297 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~--~ 297 (535)
...++|...+.||+|+||.||+|... +++.||||++..... ......+.+|+++++.++||||+++++++..... .
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 44678999999999999999999864 588999999875422 1223457789999999999999999998754321 1
Q ss_pred cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCC
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGl 377 (535)
....+++++++ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCcc
Confidence 23568999998 7899888754 45899999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccch-hhhhcccc-
Q 009404 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEES-LVLWATPR- 454 (535)
Q Consensus 378 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~-~~~~~~~~- 454 (535)
+...... .....||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||.......... ........
T Consensus 165 ~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 236 (343)
T cd07878 165 ARQADDE--------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPS 236 (343)
T ss_pred ceecCCC--------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9865432 233468999999999876 568999999999999999999999996432110000 00000000
Q ss_pred ------ccC--ccccc---ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 455 ------LQD--SGTVI---SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 455 ------~~~--~~~~~---~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+.. ..... .......+.. ........+.+|+.+||+.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 237 PEVLKKISSEHARKYIQSLPHMPQQDLKK-IFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHHHhcchhhHHHHhhccccccchhHHH-hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 00000 0000000000 000122347899999999999999999999975
No 275
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.6e-36 Score=301.26 Aligned_cols=253 Identities=26% Similarity=0.369 Sum_probs=199.1
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
.++|++.+.||.|+||.||++.+. ++..+|+|.+.... ....+.|.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-EEELEDFMVEIDILSECKHPNIVGLYEAYFY----ENKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEec----CCeEE
Confidence 456788899999999999999875 58899999987543 2233458899999999999999999999875 44679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||+++++|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++....
T Consensus 79 lv~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~ 154 (280)
T cd06611 79 ILIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNK 154 (280)
T ss_pred EEeeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhc
Confidence 9999999999999987532 45899999999999999999999998 9999999999999999999999999987654
Q ss_pred cCCCCCCCCCCCccccCccccCccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccC
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAM-----VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~ 457 (535)
... .......++..|+|||.+. ...++.++||||||+++|||++|+.||....... .....
T Consensus 155 ~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~--~~~~~------- 220 (280)
T cd06611 155 STL-----QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR--VLLKI------- 220 (280)
T ss_pred ccc-----cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH--HHHHH-------
Confidence 321 1123346888999999874 3457889999999999999999999996432211 00000
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 458 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.....+.+ ..+...+..+.+++.+||+.+|++||++.++++.
T Consensus 221 -----~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 221 -----LKSEPPTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred -----hcCCCCCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 00000111 1122334558899999999999999999999985
No 276
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3e-36 Score=301.07 Aligned_cols=268 Identities=23% Similarity=0.381 Sum_probs=195.0
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
++|+..+.||+|++|.||+|... +++.||+|.+...........+.+|+++++.++|+||+++++++.+ ....++
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~l 80 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHT----KKTLTL 80 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEec----CCeEEE
Confidence 56788899999999999999976 5899999999765433333447789999999999999999999875 457799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||++ ++|.+++.... ..+++.....++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 81 v~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 155 (291)
T cd07844 81 VFEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSV 155 (291)
T ss_pred EEecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCC
Confidence 999997 49999887543 36899999999999999999999998 99999999999999999999999999875432
Q ss_pred CCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccc--ccCccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPR--LQDSGT 460 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~--~~~~~~ 460 (535)
.. .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......+.....+.... ..+...
T Consensus 156 ~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07844 156 PS-----KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWP 230 (291)
T ss_pred CC-----ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhh
Confidence 21 11122346788999998865 45789999999999999999999999644311110000000000 000000
Q ss_pred cc---cc--------CCCCCCCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 461 VI---SE--------LPDPRLKGDFP-KEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 461 ~~---~~--------~~~~~l~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.. .+ .....+....+ ......+.+++.+||+.+|++|||+.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 231 GVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00 00 00000000000 0011457889999999999999999998863
No 277
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=3e-36 Score=301.19 Aligned_cols=269 Identities=21% Similarity=0.295 Sum_probs=195.8
Q ss_pred HhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++++|...+.||+|+||.||+|... +++.||+|++...........+.+|+++++.++|+||+++.+++.. ....
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~----~~~~ 78 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHT----KETL 78 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEec----CCeE
Confidence 3567888999999999999999875 5889999999765444444457899999999999999999999875 4467
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+. ++|.+++.... ..+.+..+..++.|++.||+|||+.+ |+|+||||+|||++.++.++|+|||+++..
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 153 (291)
T cd07870 79 TFVFEYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAK 153 (291)
T ss_pred EEEEeccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEecccccccc
Confidence 99999995 78887775432 45788889999999999999999998 999999999999999999999999998754
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccccc----
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ---- 456 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~---- 456 (535)
.... .......++..|+|||.+.+. .++.++||||||+++|||++|..||.......+.....|......
T Consensus 154 ~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 228 (291)
T cd07870 154 SIPS-----QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDT 228 (291)
T ss_pred CCCC-----CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhh
Confidence 3321 112233568899999988753 578899999999999999999999965432211111111000000
Q ss_pred -----CcccccccCCC----CCCCCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 457 -----DSGTVISELPD----PRLKGDF-PKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 457 -----~~~~~~~~~~~----~~l~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
.......+... ..+.... .......+.+++.+|++.||.+|||+.|++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 229 WPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000000 0000000 0011345788999999999999999999875
No 278
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3e-36 Score=299.52 Aligned_cols=252 Identities=26% Similarity=0.379 Sum_probs=192.0
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHH-HhccCCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDM-LSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~-l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
++|+..+.||+|+||.||++++. +|+.||+|+++..........+..|+.. ++.++||||+++++++.. ....+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~----~~~~~ 76 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR----EGDVW 76 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec----CCcEE
Confidence 36788899999999999999976 5899999999765433334456666665 566799999999999875 34679
Q ss_pred EEEecCCCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 303 LVFEFMPNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLHEA-AAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
++|||++ |+|.++++... ...+++..+..++.|++.||+|||++ + ++||||||+|||+++++.+||+|||++.
T Consensus 77 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~ 152 (283)
T cd06617 77 ICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISG 152 (283)
T ss_pred EEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccc
Confidence 9999996 78988886532 24589999999999999999999987 6 9999999999999999999999999987
Q ss_pred ccccCCCCCCCCCCCccccCccccCcccccc----CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMV----GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~ 455 (535)
...... ......++..|+|||.+.. ..++.++|+||||+++|||++|+.||.......+ ....
T Consensus 153 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~------ 219 (283)
T cd06617 153 YLVDSV------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ-QLKQ------ 219 (283)
T ss_pred cccccc------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH-HHHH------
Confidence 654321 1223457889999998864 4568899999999999999999999854221100 0000
Q ss_pred cCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 456 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
... ...+.+. ....+..+.+++.+||..+|++||++.++++.
T Consensus 220 -----~~~-~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 220 -----VVE-EPSPQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred -----HHh-cCCCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0011110 11234558899999999999999999999974
No 279
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=5.4e-36 Score=294.16 Aligned_cols=253 Identities=30% Similarity=0.426 Sum_probs=204.6
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
++|+..+.||+|++|.||+++..+ ++.|+||++...........+.+|+..+..++|+||+++++++.. ....++
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~l 76 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYK----EGEISI 76 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcc----CCeEEE
Confidence 367788999999999999999875 899999999876543445668999999999999999999999876 457799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHE-AAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
||||+++++|.+++... ..+++..+..++.|+++||+|||+ .+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 77 v~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~ 151 (264)
T cd06623 77 VLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLE 151 (264)
T ss_pred EEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 99999999999999764 568999999999999999999999 88 9999999999999999999999999998765
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
.... ......++..|+|||.+....++.++|+||||+++|+|++|+.||...............
T Consensus 152 ~~~~-----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~----------- 215 (264)
T cd06623 152 NTLD-----QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAI----------- 215 (264)
T ss_pred cCCC-----cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHH-----------
Confidence 4321 112446788999999999889999999999999999999999998654321111111100
Q ss_pred ccCCCCCCCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 463 SELPDPRLKGDFPKE-EMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.....+. .+.. .+..+.+++.+||..+|++||++.|+++.
T Consensus 216 ~~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 216 CDGPPPS----LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred hcCCCCC----CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0011111 1222 34568999999999999999999999974
No 280
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=9.6e-36 Score=292.53 Aligned_cols=255 Identities=27% Similarity=0.417 Sum_probs=199.4
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|...+.||+|+||.||+|... +++.|++|.++..... .....+.+|+++++.++|+||+++++++.. ....++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~----~~~~~l 76 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH----REKVYI 76 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec----CCEEEE
Confidence 4677889999999999999875 5899999999765432 244568999999999999999999998765 456799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
|+||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++.....
T Consensus 77 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~ 151 (264)
T cd06626 77 FMEYCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKN 151 (264)
T ss_pred EEecCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCC
Confidence 99999999999999753 34789999999999999999999998 99999999999999999999999999987754
Q ss_pred CCCCCCCCCCCccccCccccCccccccCC---CCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGR---ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
..... ........++..|+|||++.... .+.++||||||+++|||++|+.||....... .......
T Consensus 152 ~~~~~-~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~--~~~~~~~-------- 220 (264)
T cd06626 152 NTTTM-GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF--QIMFHVG-------- 220 (264)
T ss_pred CCCcc-cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH--HHHHHHh--------
Confidence 43211 11122346788999999998766 8999999999999999999999996432111 1000000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
....+.+.. .......+.+++.+||+.+|++|||+.|++.
T Consensus 221 ---~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 221 ---AGHKPPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ---cCCCCCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000111111 1122455789999999999999999999875
No 281
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.8e-36 Score=300.83 Aligned_cols=254 Identities=27% Similarity=0.359 Sum_probs=192.7
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccC-CCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|...+.||+|+||.||++... +++.||+|.+...........+.+|+.++.++. |+||+++++++.. ....++
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~----~~~~~~ 80 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR----EGDCWI 80 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec----CCcEEE
Confidence 3445678999999999999875 489999999976544444556889999999995 9999999998875 345689
Q ss_pred EEecCCCCCHHHhh---hhcccCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 304 VFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAARGLEYLHEA-AAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 304 V~e~~~~gsL~~~l---~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
+|||+. ++|.++. .......+++..+..++.|++.||+|||+. + ++||||||+||++++++.++|+|||++.
T Consensus 81 ~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 156 (288)
T cd06616 81 CMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISG 156 (288)
T ss_pred EEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhH
Confidence 999985 4655543 222335689999999999999999999975 6 9999999999999999999999999997
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccC---CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccccc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVG---RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
...... ......|+..|+|||.+... .++.++||||||+++|||++|+.||.......+ ... .
T Consensus 157 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~-----~-- 222 (288)
T cd06616 157 QLVDSI------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFD-QLT-----Q-- 222 (288)
T ss_pred HhccCC------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHH-HHh-----h--
Confidence 654321 11233578899999998766 689999999999999999999999864321000 000 0
Q ss_pred CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
......+.+....+...+..+.+|+.+||+.+|++|||+.+|++.
T Consensus 223 -----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 223 -----VVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -----hcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000011122222223345568999999999999999999999975
No 282
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=6.5e-36 Score=297.47 Aligned_cols=267 Identities=21% Similarity=0.287 Sum_probs=198.9
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||+|+||.||+|++. +|+.||||++..... ......+.+|+.+++.++||||+++++++.. ....++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----~~~~~~ 76 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH----GSGFVL 76 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec----CCeeEE
Confidence 4677889999999999999975 589999999976543 2334568899999999999999999999876 456799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||+ +++|.+++.... ..+++..+..++.|+++||+|||+.+ ++|+||||+||++++++.++|+|||++.....
T Consensus 77 v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 77 VMEYM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSE 151 (286)
T ss_pred Eeccc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccC
Confidence 99999 999999987543 56899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhh-c-------ccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW-A-------TPR 454 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~-~-------~~~ 454 (535)
... .......++..|+|||.+... .++.++||||||+++|||++|..||.............. . .+.
T Consensus 152 ~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07832 152 EEP----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPG 227 (286)
T ss_pred CCC----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhh
Confidence 321 112334688999999988654 468999999999999999999777754322110000000 0 000
Q ss_pred ccCcccccccCCCCCCC----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 455 LQDSGTVISELPDPRLK----GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 455 ~~~~~~~~~~~~~~~l~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..+... ...+..+... .....+....+.+++.+||+.+|++|||+++++++
T Consensus 228 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 228 LTSLPD-YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred ccCcch-hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000 0000000000 00111234678999999999999999999999875
No 283
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.9e-36 Score=301.76 Aligned_cols=247 Identities=25% Similarity=0.387 Sum_probs=194.9
Q ss_pred CCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 228 SGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 228 ~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
.....||+|+||.||++... ++..||||++.... ....+.+.+|+.+++.++|+||+++++.+.. ....++|||
T Consensus 25 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~----~~~~~lv~e 99 (292)
T cd06658 25 DSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYLV----GDELWVVME 99 (292)
T ss_pred hhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHheec----CCeEEEEEe
Confidence 33456999999999999875 58899999986543 2334558899999999999999999998875 446799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++++|.+++.. ..+++..+..++.|++.||+|||+++ |+||||||+||++++++.++|+|||++.......
T Consensus 100 ~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~- 172 (292)
T cd06658 100 FLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV- 172 (292)
T ss_pred CCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccccc-
Confidence 9999999998854 35889999999999999999999998 9999999999999999999999999987654321
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
.......|+..|+|||.+....++.++||||||+++|||++|+.||.......... . +....
T Consensus 173 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~--~------------~~~~~ 234 (292)
T cd06658 173 ----PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR--R------------IRDNL 234 (292)
T ss_pred ----ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--H------------HHhcC
Confidence 11233568899999999988889999999999999999999999986432211000 0 00011
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.+.... ....+..+.+++.+||..||.+|||+.|+++.
T Consensus 235 ~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 235 PPRVKD--SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CCcccc--ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111111 11223458889999999999999999999975
No 284
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-38 Score=294.50 Aligned_cols=248 Identities=23% Similarity=0.375 Sum_probs=206.9
Q ss_pred CCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~ 305 (535)
|.+.++||+|++|.||++.++. |+.||+|.+..+. ..+++..|+.+|++.+.|++|+++|.+-. ...+++||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s---DLQEIIKEISIMQQC~S~yVVKYYGSYFK----~sDLWIVM 107 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT---DLQEIIKEISIMQQCKSKYVVKYYGSYFK----HSDLWIVM 107 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc---hHHHHHHHHHHHHHcCCchhhhhhhhhcc----CCceEeeh
Confidence 5667889999999999998764 9999999998653 23458899999999999999999998765 45679999
Q ss_pred ecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 306 EFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 306 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
|||.-|++.+.++.+ .+++.+.++..++...++||+|||... -+|||||+.|||++.+|.+||+|||.|-.+....
T Consensus 108 EYCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 108 EYCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM 183 (502)
T ss_pred hhcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence 999999999999764 477999999999999999999999987 7999999999999999999999999998776532
Q ss_pred CCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccC
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISEL 465 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
.......||+.|||||++..-.|..++||||||++..||..|++||..-.+-.. .+ .+..-
T Consensus 184 -----AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA----IF----------MIPT~ 244 (502)
T KOG0574|consen 184 -----AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA----IF----------MIPTK 244 (502)
T ss_pred -----HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce----eE----------eccCC
Confidence 234567899999999999999999999999999999999999999853221100 00 01112
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 466 PDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 466 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+.|.+ ..|+..+..+.++++.||-++|++|.|+.+++++
T Consensus 245 PPPTF--~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 245 PPPTF--KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCCCC--CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 22332 3467778889999999999999999999999875
No 285
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=312.28 Aligned_cols=246 Identities=29% Similarity=0.418 Sum_probs=201.1
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCCh--hHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNA--DSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~--~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
.|+.++.||.|+||.||-|++. +.+.||||++.....+.. -.+++.|+..|++++|||++.+.|++.. ....|
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr----e~TaW 102 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR----EHTAW 102 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec----cchHH
Confidence 3566788999999999999864 588999999986543322 2458999999999999999999999986 44669
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
|||||| -|+-.|.|.-. .+++.+..+..|..+.+.||+|||+.+ .||||||+.|||+++.|.|||+|||.|....
T Consensus 103 LVMEYC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~ 177 (948)
T KOG0577|consen 103 LVMEYC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMA 177 (948)
T ss_pred HHHHHH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcC
Confidence 999999 56888887643 367999999999999999999999998 9999999999999999999999999997654
Q ss_pred cCCCCCCCCCCCccccCccccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAM---VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
+ ...++|||.|||||++. .+.|+-++||||||++..||...++|++....- +....
T Consensus 178 P---------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM---SALYH--------- 236 (948)
T KOG0577|consen 178 P---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALYH--------- 236 (948)
T ss_pred c---------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH---HHHHH---------
Confidence 2 35689999999999885 678999999999999999999999998754321 11110
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+.....|.+. ..+.+..+..++..||++-|.+|||.++++++
T Consensus 237 --IAQNesPtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 237 --IAQNESPTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred --HHhcCCCCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 1111223322 34556779999999999999999999999875
No 286
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.7e-36 Score=298.80 Aligned_cols=269 Identities=27% Similarity=0.385 Sum_probs=199.8
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
++|+..+.||+|+||.||+|.+. +++.||||.++.... ......+.+|+++++.++|+||+++++++.. ....+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~ 76 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR----KGRLY 76 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE----CCEEE
Confidence 35788899999999999999976 488999999875432 2334568899999999999999999999876 44679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||++++.|..++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++....
T Consensus 77 iv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~ 151 (288)
T cd07833 77 LVFEYVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALR 151 (288)
T ss_pred EEEecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccC
Confidence 999999987776655432 45899999999999999999999998 9999999999999999999999999988765
Q ss_pred cCCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccC----
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD---- 457 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~---- 457 (535)
.... .......++..|+|||++... .++.++||||||+++|+|++|+.||..................+..
T Consensus 152 ~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (288)
T cd07833 152 ARPA----SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQE 227 (288)
T ss_pred CCcc----ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhh
Confidence 4321 122335678899999999887 7899999999999999999999998643221100000000000000
Q ss_pred ---cccccc--cCCCCC----CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 458 ---SGTVIS--ELPDPR----LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 458 ---~~~~~~--~~~~~~----l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
...... +..... ....++...+..+.+++.+||..+|++|||+.++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 228 LFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred hcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 000000 000000 0011223335678999999999999999999999863
No 287
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=9.9e-37 Score=310.49 Aligned_cols=242 Identities=24% Similarity=0.252 Sum_probs=184.2
Q ss_pred cceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhcc---CCCCccceeeeeeecccCcceEEEEEe
Q 009404 233 VGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRL---HHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 233 LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
||+|+||+||+|+.. +++.||||++..... ......+..|..++... +||||+++++++.+ ....++|||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~----~~~~~lv~e 76 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT----DSDLYLVTD 76 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec----CCeEEEEEc
Confidence 799999999999875 489999999864321 11222345566666655 79999999998876 446799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.++|+|||++.......
T Consensus 77 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~- 150 (330)
T cd05586 77 YMSGGELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN- 150 (330)
T ss_pred CCCCChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-
Confidence 99999999998753 55899999999999999999999998 9999999999999999999999999987543321
Q ss_pred CCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISEL 465 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
.......||..|+|||.+.+. .++.++|||||||++|||++|+.||............. . .
T Consensus 151 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~-------~-----~-- 212 (330)
T cd05586 151 ----KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIA-------F-----G-- 212 (330)
T ss_pred ----CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHH-------c-----C--
Confidence 122345689999999998754 47999999999999999999999996432211000000 0 0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC----CHHHHHHH
Q 009404 466 PDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP----TMSEVVQI 506 (535)
Q Consensus 466 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP----t~~evl~~ 506 (535)
...+. ....+..+.+++.+||+.||++|| ++.|++++
T Consensus 213 -~~~~~---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 213 -KVRFP---KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred -CCCCC---CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 00000 011234578899999999999998 57777763
No 288
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.1e-36 Score=299.72 Aligned_cols=267 Identities=21% Similarity=0.321 Sum_probs=195.9
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||.|+||.||+|+.. +++.||||++...... .....+.+|++++++++||||+++++++.+ ....++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~~ 76 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----ENKLYL 76 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc----CCcEEE
Confidence 4777889999999999999875 5899999998754322 233458899999999999999999999865 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||++ ++|.+++.......+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++.....
T Consensus 77 v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~ 152 (284)
T cd07860 77 VFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 152 (284)
T ss_pred Eeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhccc
Confidence 999995 68999987655566899999999999999999999998 99999999999999999999999999876543
Q ss_pred CCCCCCCCCCCccccCccccCccccccCC-CCccchHHHHHHHHHHHHhCCCCCCCccccccc-hhhhhccccc------
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGR-ASLMSDVFSFGVVLLELITGRQPIHRSITKGEE-SLVLWATPRL------ 455 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~-~~~~~~~~~~------ 455 (535)
.. .......++..|+|||.+.+.. ++.++||||||+++|||+||+.||......... ..........
T Consensus 153 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd07860 153 PV-----RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 227 (284)
T ss_pred Cc-----cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhh
Confidence 21 1122334678899999886644 588999999999999999999998643221100 0000000000
Q ss_pred ----cCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 456 ----QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 456 ----~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..............+. .........+.+++.+||+.||++|||+.|++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 228 VTSLPDYKPSFPKWARQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred hhHHHHHHhhcccccccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0000000000000000 0011223457889999999999999999999864
No 289
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=288.11 Aligned_cols=253 Identities=23% Similarity=0.291 Sum_probs=201.9
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
+++|++.+.||+|.|+.||+.... .|+.+|+|.+..... ....+.+.+|+.+-+.|+||||+++...+.+ ..+.
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~----~~~~ 85 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE----ESFH 85 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcc----ccee
Confidence 466777889999999999998754 588899988865432 2244568899999999999999999987765 5678
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC---CCCcEEEEecCCc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD---ENLNAKITDLGMA 378 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~---~~~~vkL~DFGla 378 (535)
|+|+|+|.|++|..-+-.+ .-+++..+-...+||+++|.|.|.++ |+|||+||.|+|+- ..--+||+|||+|
T Consensus 86 ylvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvA 160 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLA 160 (355)
T ss_pred EEEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceE
Confidence 9999999999998776443 44788888999999999999999998 99999999999994 3445999999999
Q ss_pred cccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCc
Q 009404 379 KRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS 458 (535)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
..+.. ....-.+.||++|||||++...+|+..+|||+-||+||-|+.|.+||....... +
T Consensus 161 i~l~~------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r---l----------- 220 (355)
T KOG0033|consen 161 IEVND------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR---L----------- 220 (355)
T ss_pred EEeCC------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH---H-----------
Confidence 98873 234567889999999999999999999999999999999999999997522211 1
Q ss_pred ccccccCC--CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 459 GTVISELP--DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 459 ~~~~~~~~--~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.+.+. +..+.+.......+...+|+++||..||.+|.|+.|.+.+-+
T Consensus 221 ---ye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW 269 (355)
T KOG0033|consen 221 ---YEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPW 269 (355)
T ss_pred ---HHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence 01111 111222233345566889999999999999999999886543
No 290
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.3e-35 Score=298.93 Aligned_cols=260 Identities=20% Similarity=0.261 Sum_probs=197.6
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||.||++.... ++.|++|.+..... ......+.+|+++++.++||||+++++.+.. ....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----~~~~ 76 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET----KRHL 76 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec----CCEE
Confidence 367888999999999999998764 78999999875432 2233457899999999999999999998865 4467
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||+++..
T Consensus 77 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~ 151 (305)
T cd05609 77 CMVMEYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIG 151 (305)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCcccc
Confidence 9999999999999999754 45899999999999999999999998 999999999999999999999999998742
Q ss_pred ccCCCCC----------CCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhc
Q 009404 382 KADGLPS----------CSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA 451 (535)
Q Consensus 382 ~~~~~~~----------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~ 451 (535)
....... .........++..|+|||.+....++.++|+||||+++|||++|..||.............
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~-- 229 (305)
T cd05609 152 LMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI-- 229 (305)
T ss_pred CcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--
Confidence 2111000 0001122457889999999988889999999999999999999999996432211000000
Q ss_pred cccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 452 TPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
......+.... ..+..+.+++.+||+.||++||++.++.+.|+.
T Consensus 230 ----------~~~~~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 230 ----------SDDIEWPEGDE----ALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred ----------hcccCCCCccc----cCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 00111111111 233458899999999999999996555555554
No 291
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=4.9e-36 Score=300.86 Aligned_cols=250 Identities=22% Similarity=0.367 Sum_probs=196.8
Q ss_pred CCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEec
Q 009404 229 GSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 229 ~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
....||+|+||.||++... +++.||+|.+..... .....+.+|+.+++.++||||+++++++.. ....++||||
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~----~~~~~iv~e~ 99 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQHQNVVEMYKSYLV----GEELWVLMEF 99 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-chHHHHHHHHHHHHhCCCCchhhhhhheee----CCeEEEEEec
Confidence 3457999999999999875 589999999875433 334558899999999999999999998876 4467999999
Q ss_pred CCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCC
Q 009404 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP 387 (535)
Q Consensus 308 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~ 387 (535)
+++++|.+++.. ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 100 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-- 171 (297)
T cd06659 100 LQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-- 171 (297)
T ss_pred CCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc--
Confidence 999999998754 45899999999999999999999998 9999999999999999999999999987654321
Q ss_pred CCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCC
Q 009404 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPD 467 (535)
Q Consensus 388 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (535)
.......|+..|+|||++....++.++||||||+++|||++|+.||....... ...... ....
T Consensus 172 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~~~------------~~~~ 234 (297)
T cd06659 172 ---PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKRLR------------DSPP 234 (297)
T ss_pred ---ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHh------------ccCC
Confidence 11233568899999999998889999999999999999999999996432211 100000 0000
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 468 PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
+.. ..+......+.+++.+||+.+|++||++.++++.-.-+
T Consensus 235 ~~~--~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~ 275 (297)
T cd06659 235 PKL--KNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLL 275 (297)
T ss_pred CCc--cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhc
Confidence 000 01112234588899999999999999999999964433
No 292
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.1e-35 Score=297.58 Aligned_cols=250 Identities=24% Similarity=0.385 Sum_probs=199.7
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
++|...+.||+|+||.||++... +++.|++|.+..... ...+.+.+|+.+++.++|||++++++++.. ....++
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~----~~~~~l 93 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ-PKKELIINEILVMRENKHPNIVNYLDSYLV----GDELWV 93 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc-hHHHHHHHHHHHHhhcCCCCeeehhheeee----CCcEEE
Confidence 67888899999999999999864 578999999865432 334558899999999999999999999876 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
|+||+++++|.+++.. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 94 v~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~ 167 (293)
T cd06647 94 VMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (293)
T ss_pred EEecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence 9999999999999865 34789999999999999999999998 99999999999999999999999999876543
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
... ......+++.|+|||.+....++.++||||||+++|+|++|+.||........... ..
T Consensus 168 ~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~-~~------------- 228 (293)
T cd06647 168 EQS-----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IA------------- 228 (293)
T ss_pred ccc-----ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee-hh-------------
Confidence 221 12234588899999999888899999999999999999999999964322111000 00
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.........+...+..+.+++.+||+.+|++||++.+++.+
T Consensus 229 --~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 229 --TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred --cCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000011123344568899999999999999999999976
No 293
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-37 Score=313.04 Aligned_cols=245 Identities=27% Similarity=0.429 Sum_probs=202.8
Q ss_pred cccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCC
Q 009404 231 NIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMP 309 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~ 309 (535)
-+||+|.+|+||.|++.+ ...+|||-+.......... +.+|+.+=+.|+|.|||+++|.+.+ +.+.-|.||-++
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QP-LhEEIaLH~~LrHkNIVrYLGs~se----nGf~kIFMEqVP 655 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQP-LHEEIALHSTLRHKNIVRYLGSVSE----NGFFKIFMEQVP 655 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhcc-HHHHHHHHHHHhhHhHHHHhhccCC----CCeEEEEeecCC
Confidence 359999999999999765 6679999998765444332 7899999999999999999999876 447788999999
Q ss_pred CCCHHHhhhhcccCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC-CCCcEEEEecCCccccccCCC
Q 009404 310 NGNLRDCLDGVLVEGM--NWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD-ENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 310 ~gsL~~~l~~~~~~~l--~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~-~~~~vkL~DFGla~~~~~~~~ 386 (535)
||+|.+.|+..- .++ .+.++-.+..||++||.|||++. |+|||||-+||||+ -.|.+||+|||-++++..-
T Consensus 656 GGSLSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-- 729 (1226)
T KOG4279|consen 656 GGSLSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-- 729 (1226)
T ss_pred CCcHHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccC--
Confidence 999999998643 234 78888999999999999999998 99999999999996 5788999999999887532
Q ss_pred CCCCCCCCccccCccccCccccccCC--CCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccccc
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGR--ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (535)
......+.||..|||||++..++ |..++|||||||++.||.||++||........ . +-+
T Consensus 730 ---nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA---A-------------MFk 790 (1226)
T KOG4279|consen 730 ---NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA---A-------------MFK 790 (1226)
T ss_pred ---CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH---h-------------hhh
Confidence 34567789999999999998654 88999999999999999999999965432210 0 111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 465 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
+.-.....+.|.+.+.....++.+|+..||.+||++.++++
T Consensus 791 VGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 791 VGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred hcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 11222345678899999999999999999999999999996
No 294
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=6.6e-36 Score=298.69 Aligned_cols=246 Identities=26% Similarity=0.341 Sum_probs=198.5
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|+..+.||+|+||.||++... +++.||+|++..... ......+.+|+++++.++||||+++++++.+ ....
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~ 76 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD----DSNL 76 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc----CCeE
Confidence 36778899999999999999875 489999999865321 2334558899999999999999999999876 4467
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+|||+++++.+||+|||++...
T Consensus 77 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~ 151 (290)
T cd05580 77 YLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRV 151 (290)
T ss_pred EEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCcccc
Confidence 9999999999999999764 56899999999999999999999998 999999999999999999999999998876
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
... .....+++.|+|||.+.....+.++||||||+++|+|++|+.||...... ....
T Consensus 152 ~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~------------ 208 (290)
T cd05580 152 KGR--------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI---QIYE------------ 208 (290)
T ss_pred CCC--------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---HHHH------------
Confidence 433 22345789999999998888999999999999999999999998643311 0000
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQI 506 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 506 (535)
.+... ....+...+..+.+++.+||..||.+|+ +++|+++.
T Consensus 209 --~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 209 --KILEG--KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred --HHhcC--CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 00000 0112223345688999999999999999 77888754
No 295
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.5e-36 Score=293.68 Aligned_cols=251 Identities=22% Similarity=0.316 Sum_probs=197.8
Q ss_pred CCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||+|+||.||++.... |..+|+|.+..... ....+.+.+|+++++.++|+||+++++.+.+ ....++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~----~~~~~l 76 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE----NGRLFI 76 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc----CCeEEE
Confidence 46778899999999999999764 88899999875422 1233457899999999999999999998865 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-cEEEEecCCccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL-NAKITDLGMAKRLK 382 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~-~vkL~DFGla~~~~ 382 (535)
|+||+++++|.+++.......+++..+..++.|+++||+|||+.+ ++|+||+|+||++++++ .++|+|||.+....
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (257)
T cd08225 77 VMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN 153 (257)
T ss_pred EEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhcc
Confidence 999999999999997654456899999999999999999999998 99999999999999875 46999999987764
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
... .......|++.|+|||.+....++.++||||||+++|||++|..||....... ..... .
T Consensus 154 ~~~-----~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~----~------- 215 (257)
T cd08225 154 DSM-----ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ--LVLKI----C------- 215 (257)
T ss_pred CCc-----ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH--HHHHH----h-------
Confidence 322 11123457889999999988889999999999999999999999986432111 00000 0
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.... + ..+...+..+.+++.+||..+|++|||+.|+++.
T Consensus 216 ~~~~-~----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 216 QGYF-A----PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred cccC-C----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0000 0 1112233458899999999999999999999864
No 296
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.5e-35 Score=298.74 Aligned_cols=250 Identities=26% Similarity=0.378 Sum_probs=195.4
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC--ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP--NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
...|...+.||+|+||+||+|+.. +++.||+|.+...... +....+.+|+++++.++||||+++.+++.+ ...
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~----~~~ 89 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR----EHT 89 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe----CCe
Confidence 355777889999999999999875 5899999998644322 223458899999999999999999999886 345
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++||||++ |+|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++..
T Consensus 90 ~~lv~e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~ 164 (307)
T cd06607 90 AWLVMEYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASL 164 (307)
T ss_pred EEEEHHhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCccee
Confidence 699999996 6887777543 245899999999999999999999998 99999999999999999999999999875
Q ss_pred cccCCCCCCCCCCCccccCccccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccC
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAM---VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~ 457 (535)
.... ....++..|+|||.+. ...++.++||||||+++|||++|..||........ ....
T Consensus 165 ~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~---~~~~------ 226 (307)
T cd06607 165 VSPA---------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---LYHI------ 226 (307)
T ss_pred cCCC---------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH---HHHH------
Confidence 4322 2345778999999874 45688999999999999999999999864322110 0000
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 458 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.....+. ..+...+..+.+++.+||+.+|++||++.+++.+..
T Consensus 227 -----~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 269 (307)
T cd06607 227 -----AQNDSPT---LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRF 269 (307)
T ss_pred -----hcCCCCC---CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 0000011 112234556899999999999999999999998644
No 297
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1e-35 Score=296.62 Aligned_cols=254 Identities=27% Similarity=0.435 Sum_probs=202.8
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
..++.|+..+.||+|++|.||+|.+. +++.+++|++..... ....+.+|+++++.++|+|++++++++.. ...
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~ 89 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLV----GDE 89 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEE----CCE
Confidence 45667888889999999999999986 588999999976543 34568899999999999999999999876 357
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++|+||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++..
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~ 165 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQ 165 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhh
Confidence 799999999999999998743 36999999999999999999999988 99999999999999999999999999876
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
..... .......++..|+|||.+.+..++.++||||||+++|+|++|..||........ ......
T Consensus 166 ~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~--~~~~~~-------- 230 (286)
T cd06614 166 LTKEK-----SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA--LFLITT-------- 230 (286)
T ss_pred hccch-----hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHh--------
Confidence 54321 112234577899999999888899999999999999999999999864322110 000000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
... +.. ..+...+..+.+++.+||+.+|.+|||+.++++.
T Consensus 231 --~~~--~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 231 --KGI--PPL--KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred --cCC--CCC--cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 000 000 1111234558899999999999999999999863
No 298
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.3e-35 Score=292.27 Aligned_cols=255 Identities=22% Similarity=0.333 Sum_probs=199.5
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC----CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG----GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
.+|...+.||+|+||.||+|... +++.||+|.+.... .......+.+|+++++.++|+||+++++++.+.. ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--~~ 79 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE--EK 79 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC--CC
Confidence 46788899999999999999875 48999999885321 1223346889999999999999999999876533 33
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..++++||+++++|.+++... ..+++.....++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++
T Consensus 80 ~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 80 KLSIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccccc
Confidence 568999999999999998753 44889999999999999999999998 9999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
........ ........++..|+|||.+.+..++.++|+||||+++|||++|+.||....... ..
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~------------ 218 (264)
T cd06653 155 RIQTICMS--GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA--AI------------ 218 (264)
T ss_pred cccccccc--CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH--HH------------
Confidence 65432110 111233568899999999988889999999999999999999999996432111 00
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.+..........|....+.+.+++.+||+ +|..||++.+++.+
T Consensus 219 ---~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 219 ---FKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred ---HHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 00111111123344555668999999999 57999999988763
No 299
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.4e-35 Score=297.14 Aligned_cols=267 Identities=22% Similarity=0.305 Sum_probs=196.9
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC----ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP----NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
+|+..+.||+|+||.||+|... +++.||||.+...... .....+..|+++++.++|+||+++++++.+ ...
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~ 76 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH----KSN 76 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec----CCE
Confidence 4667788999999999999975 5899999999765432 223346789999999999999999999876 446
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++||||+ +++|.+++.... ..+++..+..++.|+++||.|||+++ ++|+||+|+||+++.++.++|+|||++..
T Consensus 77 ~~lv~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~ 151 (298)
T cd07841 77 INLVFEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARS 151 (298)
T ss_pred EEEEEccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeee
Confidence 79999999 999999997643 36999999999999999999999998 99999999999999999999999999987
Q ss_pred cccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhh-hccccccCc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL-WATPRLQDS 458 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~-~~~~~~~~~ 458 (535)
..... .......++..|+|||.+.+ ..++.++||||||+++|||++|..||............. .........
T Consensus 152 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (298)
T cd07841 152 FGSPN-----RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEEN 226 (298)
T ss_pred ccCCC-----ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhh
Confidence 65432 11223356788999998854 467899999999999999999977775432211100000 000000000
Q ss_pred ccc---cccCCCCCCCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 459 GTV---ISELPDPRLKG-----DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 459 ~~~---~~~~~~~~l~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
... ........... ......+..+.+++.+||+.+|++|||+.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 227 WPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000 00000000000 1112335668899999999999999999999984
No 300
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.5e-35 Score=294.58 Aligned_cols=268 Identities=24% Similarity=0.373 Sum_probs=197.6
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
+|+..+.||.|++|.||+|+.. +|+.||||.++..........+.+|+++++.++|+||+++++++.+ ....++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv 76 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHT----ENKLMLV 76 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEee----CCcEEEE
Confidence 4777899999999999999985 5899999999866544444567889999999999999999999876 3466999
Q ss_pred EecCCCCCHHHhhhhcc-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 305 FEFMPNGNLRDCLDGVL-VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
|||+++ +|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 77 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~ 152 (284)
T cd07836 77 FEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGI 152 (284)
T ss_pred EecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcC
Confidence 999974 8999886543 245899999999999999999999998 99999999999999999999999999976543
Q ss_pred CCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh-hhccccccCcccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV-LWATPRLQDSGTV 461 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~-~~~~~~~~~~~~~ 461 (535)
.. .......++..|++||.+.. ..++.++||||||+++|+|++|+.||............ .............
T Consensus 153 ~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd07836 153 PV-----NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPG 227 (284)
T ss_pred Cc-----cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHH
Confidence 21 11223356889999998865 45789999999999999999999998654322111100 0000000000000
Q ss_pred cccCCC--CCCC-------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 462 ISELPD--PRLK-------GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 462 ~~~~~~--~~l~-------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+..... .... .......+..+.+++.+||+.||++||++.|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 228 ISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred HhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000 0000 00111234568899999999999999999999863
No 301
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.1e-35 Score=297.45 Aligned_cols=270 Identities=23% Similarity=0.334 Sum_probs=199.6
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
++|+..+.||.|+||.||+|... +++.+++|.++..... .....+.+|++++++++||||+++++++.... ....+
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--~~~~~ 82 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN--LDKIY 82 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC--CCcEE
Confidence 46777899999999999999986 4889999999754322 22234678999999999999999999987532 25779
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||++ ++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||+|||+++++.++|+|||++....
T Consensus 83 lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred EEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 9999997 59999887543 35899999999999999999999998 9999999999999999999999999998765
Q ss_pred cCCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh-h---------hc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV-L---------WA 451 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~-~---------~~ 451 (535)
... .......++..|+|||.+.+. .++.++|+||||+++|||++|..||............ . |.
T Consensus 158 ~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (293)
T cd07843 158 SPL-----KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP 232 (293)
T ss_pred CCc-----cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHH
Confidence 431 112234567889999988754 4689999999999999999999999654322111000 0 00
Q ss_pred cc-cccCcc-cccccCCCCCCCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 452 TP-RLQDSG-TVISELPDPRLKGDFPKE-EMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 452 ~~-~~~~~~-~~~~~~~~~~l~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.. .+.... ....+.....+...++.. ..+.+.+++.+||+.+|++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00 000000 000111111122223332 35668899999999999999999999863
No 302
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.5e-35 Score=295.33 Aligned_cols=268 Identities=19% Similarity=0.223 Sum_probs=189.7
Q ss_pred hcCCCCCcccceeCceEEEEEEEcC----CcEEEEEEeccCCCCChhH----------HHHHHHHHHhccCCCCccceee
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTD----GRIVAVKRFKTQGGPNADS----------VFLTEVDMLSRLHHCHVVPLVG 289 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~----g~~vaVK~l~~~~~~~~~~----------~~~~Ei~~l~~l~H~niv~l~g 289 (535)
.++|.+.++||+|+||+||+|.+.+ +..+|+|+..........+ ....+...+..+.|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3578888999999999999999754 3456676544332211111 1223344556678999999999
Q ss_pred eeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc
Q 009404 290 YCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLN 369 (535)
Q Consensus 290 ~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~ 369 (535)
++..........++++|++. .++.+.+... ...++..+..++.|++.||+|||+.+ |+||||||+|||++.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCc
Confidence 87654443445678888873 4677666543 33578889999999999999999998 999999999999999999
Q ss_pred EEEEecCCccccccCCCCC--CCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchh
Q 009404 370 AKITDLGMAKRLKADGLPS--CSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESL 447 (535)
Q Consensus 370 vkL~DFGla~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~ 447 (535)
++|+|||+++.+....... .........||+.|+|||.+.+..++.++||||||+++|||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 9999999998765332111 01122335699999999999999999999999999999999999999975432211100
Q ss_pred hhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.... ..+..+...... ....++.+.+++..||..+|++||++.++++.|+
T Consensus 245 ~~~~--------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 245 AAKC--------DFIKRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HhHH--------HHHHHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 0000 000111111110 1122355889999999999999999999998763
No 303
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2e-35 Score=293.13 Aligned_cols=245 Identities=28% Similarity=0.395 Sum_probs=192.2
Q ss_pred cceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCC
Q 009404 233 VGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMP 309 (535)
Q Consensus 233 LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~ 309 (535)
||+|+||+||++... +|+.+|+|.+.... .......+..|+++++.++||||+++++++.. ....++||||++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~lv~e~~~ 76 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET----KDDLCLVMTLMN 76 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec----CCeEEEEEecCC
Confidence 689999999999865 58999999986532 12233457789999999999999999998865 446799999999
Q ss_pred CCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCC
Q 009404 310 NGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSC 389 (535)
Q Consensus 310 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 389 (535)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||.+.......
T Consensus 77 ~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---- 149 (277)
T cd05577 77 GGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---- 149 (277)
T ss_pred CCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCC----
Confidence 999999997655456999999999999999999999998 9999999999999999999999999987654321
Q ss_pred CCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCC
Q 009404 390 SSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469 (535)
Q Consensus 390 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (535)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||.............. ... .
T Consensus 150 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------------~~~--~ 212 (277)
T cd05577 150 --KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR-------------RTL--E 212 (277)
T ss_pred --ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh-------------ccc--c
Confidence 12234577889999999888899999999999999999999999965432111110000 000 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 009404 470 LKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQ 505 (535)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 505 (535)
.....+...+..+.+++.+||+.||++|| ++.++++
T Consensus 213 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 213 MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 01112233355688999999999999999 6666765
No 304
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.1e-35 Score=293.62 Aligned_cols=266 Identities=21% Similarity=0.306 Sum_probs=195.8
Q ss_pred CCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
|+..+.||.|++|.||+|... +|+.||+|++...... .....+.+|+++++.++|||++++++++.+ ....+++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~----~~~~~iv 76 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS----ENKLYLV 76 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc----CCeEEEE
Confidence 556788999999999999875 6999999999754322 223458889999999999999999999876 4567999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||++ ++|.+++.......+++..+..++.|+++||+|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 77 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~ 152 (283)
T cd07835 77 FEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVP 152 (283)
T ss_pred EeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCC
Confidence 99995 69999997654456899999999999999999999998 999999999999999999999999998765332
Q ss_pred CCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchh-hhhcccc-------c
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESL-VLWATPR-------L 455 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~-~~~~~~~-------~ 455 (535)
. .......++..|+|||++... .++.++||||||+++|+|++|+.||........... ....... .
T Consensus 153 ~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (283)
T cd07835 153 V-----RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGV 227 (283)
T ss_pred c-----cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhh
Confidence 1 111223467889999987654 578999999999999999999999865432111000 0000000 0
Q ss_pred cCccc---ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 456 QDSGT---VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 456 ~~~~~---~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..... ........... ......+..+.+++.+||+.||++|||+.|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 228 TSLPDYKPTFPKWARQDLS-KVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhchhhhhhcccccccchh-hhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000 00000000000 1112233568899999999999999999999864
No 305
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-36 Score=305.33 Aligned_cols=253 Identities=24% Similarity=0.364 Sum_probs=200.2
Q ss_pred cCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCC-CCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
..|+++++||+||.+.||++...+.+.+|+|++.... ......-|..|+.+|.+| .|.+|++|++|-.. +..+|
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~----d~~lY 436 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT----DGYLY 436 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc----CceEE
Confidence 4577789999999999999999888899999886543 333345599999999999 59999999988654 66889
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||= ..+|..+|+........| .+..+..|++.++.++|.+| |||.||||.|+|+-. |.+||+|||.|..+.
T Consensus 437 mvmE~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 437 MVMECG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANAIQ 510 (677)
T ss_pred EEeecc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcccC
Confidence 999986 679999998765444445 78889999999999999999 999999999999975 489999999999887
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCC-----------CCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGR-----------ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA 451 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~ 451 (535)
.+... -....+.||+.||+||.+.... .+++|||||+|||||+|+.|+.||...... |
T Consensus 511 ~DTTs---I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~-------~- 579 (677)
T KOG0596|consen 511 PDTTS---IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ-------I- 579 (677)
T ss_pred ccccc---eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH-------H-
Confidence 76432 2345578999999999885322 578999999999999999999999643211 1
Q ss_pred cccccCcccccccCCCCCCCCCCCHHH-HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 452 TPRLQDSGTVISELPDPRLKGDFPKEE-MQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..+..+.+|...-+||.-- ...+.++|+.||..||.+|||+.|+|+.
T Consensus 580 --------aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 580 --------AKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred --------HHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 1233445554333333211 1228899999999999999999999974
No 306
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.3e-35 Score=303.16 Aligned_cols=279 Identities=22% Similarity=0.286 Sum_probs=201.8
Q ss_pred HhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC-CCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 299 (535)
..++|+..+.||+|+||.||+|.+. +++.+|||++.... .......+.+|+.+++++ +||||+++++++.... ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~--~~ 82 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN--DK 82 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC--Cc
Confidence 4567888899999999999999976 48899999886431 122234477899999999 9999999999886532 34
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..++||||++ ++|.+++... .+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||++.
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred eEEEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 6799999996 5999988653 6889999999999999999999998 9999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccccc--
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ-- 456 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~-- 456 (535)
..................|+..|+|||.+.. ..++.++||||||+++|+|++|+.||....................
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 7654332111122334568899999998764 5678999999999999999999999864332211110000000000
Q ss_pred --------CcccccccCCCCCCC--CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--Hhhh
Q 009404 457 --------DSGTVISELPDPRLK--GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI--LSTI 510 (535)
Q Consensus 457 --------~~~~~~~~~~~~~l~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~l 510 (535)
.....+..+...... .......+..+.+++.+||+.||++|||+.++++. +..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 000000000000000 00111134568999999999999999999999975 4444
No 307
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.1e-35 Score=290.28 Aligned_cols=243 Identities=26% Similarity=0.360 Sum_probs=194.3
Q ss_pred cceeCceEEEEEEEcC-CcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCC
Q 009404 233 VGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMP 309 (535)
Q Consensus 233 LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~ 309 (535)
||.|+||.||+++... ++.+|+|.+..... ......+.+|+++++.++||||+++++++.+ ....+++|||++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~ 76 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD----KKYIYMLMEYCL 76 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc----CCccEEEEecCC
Confidence 6899999999999864 88999999975432 2334568899999999999999999998875 446799999999
Q ss_pred CCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCC
Q 009404 310 NGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSC 389 (535)
Q Consensus 310 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 389 (535)
+++|.+++.+. ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 77 ~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---- 147 (262)
T cd05572 77 GGELWTILRDR--GLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---- 147 (262)
T ss_pred CCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc----
Confidence 99999999764 45899999999999999999999988 9999999999999999999999999998765431
Q ss_pred CCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCC
Q 009404 390 SSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469 (535)
Q Consensus 390 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (535)
......++..|+|||.+....++.++|+||||+++|+|++|..||....... ... ..++....
T Consensus 148 --~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~--------------~~~~~~~~ 210 (262)
T cd05572 148 --KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP-MEI--------------YNDILKGN 210 (262)
T ss_pred --ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH-HHH--------------HHHHhccC
Confidence 1123457889999999988889999999999999999999999996543210 000 01111111
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 009404 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPT-----MSEVVQ 505 (535)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~ 505 (535)
....+|...+..+.+++.+||+.+|++||+ +.|+++
T Consensus 211 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 211 GKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 112233333566999999999999999999 777766
No 308
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3e-35 Score=293.29 Aligned_cols=248 Identities=23% Similarity=0.368 Sum_probs=196.2
Q ss_pred CCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~ 305 (535)
|...+.||+|++|.||++... +++.+++|++.... ....+.+.+|+.+++.++||||+++++++.. ....++++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~----~~~~~~v~ 95 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK-QQRRELLFNEVVIMRDYQHPNIVEMYSSYLV----GDELWVVM 95 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHHcCCCChheEEEEEEc----CCeEEEEE
Confidence 444578999999999999864 58899999986543 2334458899999999999999999998875 44679999
Q ss_pred ecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 306 EFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 306 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
||+++++|.+++.. ..+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 96 EFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred eccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence 99999999999876 45899999999999999999999998 9999999999999999999999999887654321
Q ss_pred CCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccC
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISEL 465 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
.......|+..|+|||.+....++.++||||||+++|||++|+.||........... +...
T Consensus 170 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~--------------~~~~ 230 (285)
T cd06648 170 -----PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR--------------IRDN 230 (285)
T ss_pred -----cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHH--------------HHhc
Confidence 112234588999999999888899999999999999999999999864322110000 0000
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 466 PDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 466 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..+... .+...+..+.+++.+||+.+|++|||+.++++.
T Consensus 231 ~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 231 LPPKLK--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred CCCCCc--ccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 011111 111234568999999999999999999999963
No 309
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=7.4e-36 Score=292.75 Aligned_cols=248 Identities=25% Similarity=0.312 Sum_probs=199.0
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
+|+..+.||.|+||.||++... +++.||+|.+..... ......+.+|++++++++||||+++++++.+ ....+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~ 76 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD----EENMY 76 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC----CCeEE
Confidence 4777889999999999999976 489999999975432 1334568999999999999999999988765 45679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+|+||+++++|.+++... ..+++..+..++.|+++||.|||+.+ ++|+||+|+||++++++.++|+|||++....
T Consensus 77 lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~ 151 (258)
T cd05578 77 LVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVT 151 (258)
T ss_pred EEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccC
Confidence 999999999999999764 46899999999999999999999998 9999999999999999999999999988765
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
... ......|+..|+|||.+....++.++|+||||+++|+|++|..||.............
T Consensus 152 ~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~------------- 212 (258)
T cd05578 152 PDT------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRA------------- 212 (258)
T ss_pred CCc------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHH-------------
Confidence 432 1233457889999999988889999999999999999999999996543211111000
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCH--HHHH
Q 009404 463 SELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM--SEVV 504 (535)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~--~evl 504 (535)
.... .....+...+..+.+++.+||+.||.+||++ .|++
T Consensus 213 -~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 213 -KQET--ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -Hhcc--ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0000 1112233344668899999999999999999 6654
No 310
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.4e-35 Score=294.97 Aligned_cols=272 Identities=22% Similarity=0.275 Sum_probs=195.1
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhcc-CCCCccceeeeeeeccc-Ccce
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRG-KRAM 300 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~-~~~~ 300 (535)
++|+..+.||+|+||.||+|.+. +++.||||.+...... .....+.+|+.+++.+ +||||+++++++..... ....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888899999999999999975 5899999998754322 2234578899999999 57999999998875432 2234
Q ss_pred EEEEEecCCCCCHHHhhhhcc---cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CCcEEEEecC
Q 009404 301 RLLVFEFMPNGNLRDCLDGVL---VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE-NLNAKITDLG 376 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~-~~~vkL~DFG 376 (535)
.++||||+++ +|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||+|+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999975 8999886532 235899999999999999999999998 999999999999998 8899999999
Q ss_pred CccccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh-hhc-cc
Q 009404 377 MAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV-LWA-TP 453 (535)
Q Consensus 377 la~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~-~~~-~~ 453 (535)
++....... .......+++.|+|||.+.+ ..++.++||||||+++|+|++|..||............ ... .+
T Consensus 157 ~~~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 231 (295)
T cd07837 157 LGRAFSIPV-----KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTP 231 (295)
T ss_pred cceecCCCc-----cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 987653321 11122346788999998865 45789999999999999999999998643221110000 000 00
Q ss_pred cccCcccccccCCC----CCCC----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 454 RLQDSGTVISELPD----PRLK----GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 454 ~~~~~~~~~~~~~~----~~l~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.... ........+ +... .......+..+.+++.+||+.||.+||++.|++..
T Consensus 232 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 232 TEQV-WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred Chhh-CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 000000000 0000 00011234558899999999999999999999863
No 311
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.3e-35 Score=296.72 Aligned_cols=253 Identities=27% Similarity=0.379 Sum_probs=196.6
Q ss_pred CCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC--ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP--NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
|...+.||+|+||.||+++.. +++.||+|++...... +....+.+|+++++.++|||++++++++.+ ....++
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~l 102 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR----EHTAWL 102 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee----CCeEEE
Confidence 566788999999999999875 5889999998754322 223458889999999999999999999876 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||++ |+|.+.+... ...+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.....
T Consensus 103 v~e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 103 VMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP 177 (317)
T ss_pred EEeCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC
Confidence 999996 5888877543 345899999999999999999999998 99999999999999999999999999865432
Q ss_pred CCCCCCCCCCCccccCccccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAM---VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
.....++..|+|||++. .+.++.++||||||+++|||++|+.||........ ...+.
T Consensus 178 ---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~~~--------- 237 (317)
T cd06635 178 ---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYHIA--------- 237 (317)
T ss_pred ---------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHH---------
Confidence 12345788999999874 45689999999999999999999999864321110 00000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCc
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDK 514 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~ 514 (535)
........+...+..+.+++.+||+.+|.+||++.++++.+..+....
T Consensus 238 ------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 238 ------QNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred ------hccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 000000111233455889999999999999999999999877655443
No 312
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.7e-35 Score=292.74 Aligned_cols=244 Identities=26% Similarity=0.343 Sum_probs=186.2
Q ss_pred ccceeCceEEEEEEEc-CCcEEEEEEeccCCCC--ChhHHHHHHHHHHhc---cCCCCccceeeeeeecccCcceEEEEE
Q 009404 232 IVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP--NADSVFLTEVDMLSR---LHHCHVVPLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 232 ~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~--~~~~~~~~Ei~~l~~---l~H~niv~l~g~~~~~~~~~~~~~lV~ 305 (535)
.||+|+||.||++... +++.+|+|.+...... .....+.+|..+++. .+||||+.+++++.. ....++||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~lv~ 76 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT----PDKLCFIL 76 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec----CCeEEEEE
Confidence 4899999999999875 4899999998754322 222234455444433 479999999988876 34679999
Q ss_pred ecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 306 EFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 306 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.++|+|||++.......
T Consensus 77 e~~~~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~ 151 (279)
T cd05633 77 DLMNGGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 151 (279)
T ss_pred ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC
Confidence 999999999998754 45899999999999999999999998 9999999999999999999999999987553221
Q ss_pred CCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccccc
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (535)
.....|+..|+|||.+.. ..++.++||||||+++|||++|..||.............. .
T Consensus 152 -------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~------------~- 211 (279)
T cd05633 152 -------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM------------T- 211 (279)
T ss_pred -------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH------------h-
Confidence 123458899999998864 5589999999999999999999999964332211110000 0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHH
Q 009404 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQIL 507 (535)
Q Consensus 465 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~L 507 (535)
.......+...+..+.+++.+||+.||++|| ++.|++++.
T Consensus 212 ---~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~ 256 (279)
T cd05633 212 ---LTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHV 256 (279)
T ss_pred ---hcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence 0011122334455688999999999999999 699998853
No 313
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=4e-35 Score=301.49 Aligned_cols=270 Identities=21% Similarity=0.262 Sum_probs=199.7
Q ss_pred HhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeeccc--Cc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG--KR 298 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~--~~ 298 (535)
..++|+..+.||+|+||.||++... +++.||+|.+.... .......+.+|+.+++.++||||+++++++..... ..
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4577999999999999999999875 58999999986432 22333457789999999999999999998864321 22
Q ss_pred ceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCc
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMA 378 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla 378 (535)
...++||||+. ++|.+.+... +++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccc
Confidence 35699999995 5888887542 888999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh----------
Q 009404 379 KRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV---------- 448 (535)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~---------- 448 (535)
....... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||............
T Consensus 166 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
T cd07850 166 RTAGTSF------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDE 239 (353)
T ss_pred eeCCCCC------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 8654321 122345788999999999999999999999999999999999999643211100000
Q ss_pred ----------hhccccccCcccccccCCC----CCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 449 ----------LWATPRLQDSGTVISELPD----PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 449 ----------~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.+...........+.++.. +......+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 240 FMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000000000111111 111111122345568899999999999999999999975
No 314
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.5e-35 Score=298.02 Aligned_cols=269 Identities=23% Similarity=0.333 Sum_probs=195.1
Q ss_pred ccccee--CceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQG--GSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G--~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
..||+| +||+||++++. +|+.||+|++...... ...+.+.+|+.+++.++||||+++++++.. ....++|||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~----~~~~~~v~e 79 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT----GSWLWVISP 79 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec----CCceEEEEe
Confidence 346666 99999999875 5899999998754322 223558889999999999999999999876 446799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+.+++|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.++++||+.+........
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~ 156 (328)
T cd08226 80 FMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ 156 (328)
T ss_pred cccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc
Confidence 999999999998765566899999999999999999999998 99999999999999999999999986543322111
Q ss_pred CC--CCCCCCccccCccccCccccccC--CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccc--------
Q 009404 387 PS--CSSSPARMQGTFGYFAPEYAMVG--RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPR-------- 454 (535)
Q Consensus 387 ~~--~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~-------- 454 (535)
.. .........++..|+|||++... .++.++||||||+++|||++|+.||.......... .......
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~ 235 (328)
T cd08226 157 KAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLL-QKLKGPPYSPLDITT 235 (328)
T ss_pred cccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHH-HHhcCCCCCCccccc
Confidence 10 00111122356679999998763 47899999999999999999999996543211000 0000000
Q ss_pred ccCc---------------------ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 455 LQDS---------------------GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 455 ~~~~---------------------~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
.... ......+....+....+......+.+|+.+||+.||++|||+.|+++.-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~ 309 (328)
T cd08226 236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHA 309 (328)
T ss_pred cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCH
Confidence 0000 0000011111222223445667799999999999999999999999753
No 315
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.7e-35 Score=302.18 Aligned_cols=279 Identities=23% Similarity=0.286 Sum_probs=201.1
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeeccc-CcceE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG-KRAMR 301 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~-~~~~~ 301 (535)
.++|++.+.||+|+||.||+|+.. +|+.||||++...........+.+|+.+++.++||||+++++++..... .....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 467889999999999999999864 5899999999754434444568889999999999999999998764321 22357
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++|+||++ ++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeec
Confidence 99999996 588887754 46899999999999999999999998 999999999999999999999999999866
Q ss_pred ccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh-hhc-cccccCc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV-LWA-TPRLQDS 458 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~-~~~-~~~~~~~ 458 (535)
...... ........|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||............ ... .+.....
T Consensus 157 ~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 234 (336)
T cd07849 157 DPEHDH--TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDL 234 (336)
T ss_pred cccccc--cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 433211 112234568899999998654 56899999999999999999999999543211000000 000 0000000
Q ss_pred --------ccccccCCCCC-CC-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhhhC
Q 009404 459 --------GTVISELPDPR-LK-GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI--LSTIA 511 (535)
Q Consensus 459 --------~~~~~~~~~~~-l~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~l~ 511 (535)
........... .. .......+..+.+++.+||+.+|++|||+.|++++ +....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 00000000000 00 00001224558899999999999999999999986 55443
No 316
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=4.9e-35 Score=290.52 Aligned_cols=264 Identities=23% Similarity=0.266 Sum_probs=192.6
Q ss_pred CCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
|+..+.||+|+||.||+|... +++.||+|+++............+|+.++.++ +|+|++++++++.+.. ....++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~--~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRK--TGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCC--CCcEEEE
Confidence 456688999999999999865 58899999987653333333456789999988 4999999999987632 2467999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||++ ++|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||+|+||+++. +.+||+|||++......
T Consensus 79 ~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 79 FELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred EecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 99996 58888886532 45899999999999999999999998 999999999999999 99999999999866432
Q ss_pred CCCCCCCCCCccccCccccCccccc-cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh-hhccc-------cc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV-LWATP-------RL 455 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~-~~~~~-------~~ 455 (535)
. ......++..|+|||.+. ...++.++|||||||++|||++|..||............ ..... ..
T Consensus 153 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07831 153 P------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKF 226 (282)
T ss_pred C------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhh
Confidence 1 112345788999999765 456789999999999999999999999654321100000 00000 00
Q ss_pred cCcccccccCCCCCCCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 456 QDSGTVISELPDPRLKG----DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 456 ~~~~~~~~~~~~~~l~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.... ......+.... ......+..+.+++.+||+.+|++|||+.++++.
T Consensus 227 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 227 RKSR--HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccc--cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0000 00000000000 0012345679999999999999999999999874
No 317
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=295.76 Aligned_cols=251 Identities=22% Similarity=0.329 Sum_probs=208.2
Q ss_pred CCCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCCCCC-hhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPN-ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
-|...+.||+|.|..|-+|++ -.|+.||||++....... ....+.+|+..|+.++|||||++|.+... ...+||
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDT----QTKlyL 94 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT----QTKLYL 94 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcc----cceEEE
Confidence 356668899999999999975 359999999998654322 23447899999999999999999988765 567899
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe-CCCCcEEEEecCCccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL-DENLNAKITDLGMAKRLK 382 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl-~~~~~vkL~DFGla~~~~ 382 (535)
|+|+=.+|+|++||-+.. +++.+....+++.||+.|+.|.|..+ ++||||||+||.+ ..-|-|||+|||++..+.
T Consensus 95 iLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 95 ILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 999999999999996643 66999999999999999999999998 9999999999987 456789999999998776
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRAS-LMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
.. .......|+..|-|||.+.+..|. +++||||||||||.|+.|++||+...+.+.
T Consensus 171 PG------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET----------------- 227 (864)
T KOG4717|consen 171 PG------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET----------------- 227 (864)
T ss_pred Cc------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-----------------
Confidence 54 345677899999999999988884 789999999999999999999976544321
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
+..+.|-. -..|...+.+..+||..||..||.+|.+.+||+..-|-
T Consensus 228 LTmImDCK--YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wl 273 (864)
T KOG4717|consen 228 LTMIMDCK--YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWL 273 (864)
T ss_pred hhhhhccc--ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccc
Confidence 22222322 24577788889999999999999999999999975443
No 318
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3.6e-35 Score=295.56 Aligned_cols=276 Identities=22% Similarity=0.281 Sum_probs=196.1
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeeccc----Cc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG----KR 298 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~----~~ 298 (535)
++|+..+.||+|+||.||+|+.. +++.||||.+...... .....+.+|+++++.++||||+++++++..... ..
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 46888899999999999999875 5899999998754322 223346789999999999999999999875432 13
Q ss_pred ceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCc
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMA 378 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla 378 (535)
...++||||+. ++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||++
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCCc
Confidence 45699999996 58888886532 35899999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccC
Q 009404 379 KRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457 (535)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~ 457 (535)
.......... ........++..|+|||.+.+. .++.++||||||+++|||++|+.||.....................
T Consensus 167 ~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T cd07865 167 RAFSLSKNSK-PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP 245 (310)
T ss_pred ccccCCcccC-CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 8664432111 1122334578899999988654 4688999999999999999999998643322111100000000000
Q ss_pred ----cc---cccccCCCCCC-CCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 458 ----SG---TVISELPDPRL-KGDF-----PKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 458 ----~~---~~~~~~~~~~l-~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.. .....+..+.. .... +......+.+++.+||+.||++|||++|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 00 00000000000 0000 00112346789999999999999999999864
No 319
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-36 Score=276.67 Aligned_cols=249 Identities=27% Similarity=0.430 Sum_probs=197.2
Q ss_pred CCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEEEEe
Q 009404 229 GSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 229 ~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
....||.|..|.|++.+... |..+|||.+......++.++++..++++..- ..|+||+.+|||.. +...++.||
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~----n~dV~IcMe 171 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT----NTDVFICME 171 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee----CchHHHHHH
Confidence 35679999999999999765 8999999998877667777788888887766 48999999999987 334578899
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
.|. .-+..+|. ...+++++..+-++...+..||.||.+++ .|+|||+||+|||+|+.|++|++|||.+-++...
T Consensus 172 lMs-~C~ekLlk-rik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS-- 245 (391)
T KOG0983|consen 172 LMS-TCAEKLLK-RIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS-- 245 (391)
T ss_pred HHH-HHHHHHHH-HhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecc--
Confidence 983 23444444 34567999999999999999999999877 5999999999999999999999999999877653
Q ss_pred CCCCCCCCccccCccccCcccccc---CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMV---GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
...+...|-+.|||||.+.. ..|..++||||||+.|+||.||+.||.......+.-. .++.
T Consensus 246 ----kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~lt------------kvln 309 (391)
T KOG0983|consen 246 ----KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLT------------KVLN 309 (391)
T ss_pred ----cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHH------------HHHh
Confidence 23455678999999999863 4688999999999999999999999976444322211 1122
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+.+ |.+... ...+..+.+++..||+.|+.+||...+++++
T Consensus 310 ~eP-P~L~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 310 EEP-PLLPGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred cCC-CCCCcc--cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 222 333322 1256669999999999999999999988864
No 320
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.6e-35 Score=296.05 Aligned_cols=273 Identities=25% Similarity=0.307 Sum_probs=197.9
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
.++|+..+.||+|+||.||+|... +|+.||+|+++..... .....+.+|+.++++++|+||+++++++.... ....
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~ 83 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH--LDSI 83 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC--CCeE
Confidence 357888899999999999999975 4899999999754322 22234678999999999999999999986532 2356
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||++ ++|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 84 FLVMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEEEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeec
Confidence 99999996 58998887532 55899999999999999999999998 999999999999999999999999999876
Q ss_pred ccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhh-hccccccCcc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL-WATPRLQDSG 459 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~-~~~~~~~~~~ 459 (535)
.... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||............. ..........
T Consensus 159 ~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 159 GLPA-----KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIW 233 (309)
T ss_pred CCcc-----CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence 5432 11122345788999998865 557899999999999999999999996543221111100 0000000000
Q ss_pred cccc------c--CCCCCCCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 460 TVIS------E--LPDPRLKG--DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 460 ~~~~------~--~~~~~l~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.... . +....... ......+..+.+++.+||+.||++|||+.|++++-+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~ 292 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSY 292 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 0000 0 00000000 000112455788999999999999999999997543
No 321
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4.7e-35 Score=284.58 Aligned_cols=250 Identities=27% Similarity=0.432 Sum_probs=200.3
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
+|+..+.||+|++|.||++... +++.+++|++..... .....+.+|+++++.++|+|++++++++.. ....+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLK----KDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEec----CCeEEEE
Confidence 3667789999999999999986 588999999986543 344568999999999999999999998876 3467999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
+||+++++|.+++.... ..+++..+..++.|++.||++||+.+ ++|+||+|+||++++++.++|+|||.+......
T Consensus 76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 76 MEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT 151 (253)
T ss_pred EecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence 99999999999987643 46899999999999999999999988 999999999999999999999999998776543
Q ss_pred CCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (535)
.. .....++..|+|||.+....++.++||||||+++|+|++|+.||.......... ... .
T Consensus 152 ~~------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~------------~ 211 (253)
T cd05122 152 KA------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF--KIA------------T 211 (253)
T ss_pred cc------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH--HHH------------h
Confidence 21 234567889999999988889999999999999999999999986432111000 000 0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 465 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
...+.+. .+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 212 ~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 212 NGPPGLR--NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cCCCCcC--cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000011 011123558999999999999999999999864
No 322
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.2e-36 Score=309.26 Aligned_cols=198 Identities=26% Similarity=0.319 Sum_probs=169.7
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccC-CC-----Cccceeeeeeeccc
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HC-----HVVPLVGYCSEFRG 296 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~-H~-----niv~l~g~~~~~~~ 296 (535)
..+|++.++||+|.||.|-++.+. +++.||||+++.... ...+-..|+.+|..|+ |. |+|++++|+.-
T Consensus 185 ~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~--f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f--- 259 (586)
T KOG0667|consen 185 AYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR--FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF--- 259 (586)
T ss_pred EEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH--HHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc---
Confidence 348899999999999999999865 499999999987642 2233567899999885 33 99999999987
Q ss_pred CcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC--CcEEEEe
Q 009404 297 KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN--LNAKITD 374 (535)
Q Consensus 297 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~--~~vkL~D 374 (535)
..+.+||+|.+ ..+|+++|+.+.-.+++...+..|+.||+.||.+||+.+ |||+||||+||||.+- ..+||+|
T Consensus 260 -r~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVID 334 (586)
T KOG0667|consen 260 -RNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVID 334 (586)
T ss_pred -ccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEe
Confidence 66889999999 569999999888788999999999999999999999998 9999999999999643 3699999
Q ss_pred cCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCc
Q 009404 375 LGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRS 439 (535)
Q Consensus 375 FGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~ 439 (535)
||.|......- -....+..|.|||++.+.+|+.+.||||||||+.||++|.+.|...
T Consensus 335 FGSSc~~~q~v--------ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 335 FGSSCFESQRV--------YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred cccccccCCcc--------eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 99998765432 1445677899999999999999999999999999999997766544
No 323
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=5.9e-35 Score=285.07 Aligned_cols=255 Identities=25% Similarity=0.400 Sum_probs=204.2
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||+|++|.||+|... +++.|++|++..... ....+.+.+|++++++++||||+++++.+.+.. ....++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE--KNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC--CCeEEE
Confidence 3667789999999999999986 589999999876532 233456889999999999999999999987632 256799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
++||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||.+.....
T Consensus 79 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 79 FLEYVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 99999999999999764 37899999999999999999999988 99999999999999999999999999987765
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
.... .......++..|+|||.+.....+.++||||||+++|+|++|..||...... ....+
T Consensus 154 ~~~~---~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~------------- 214 (260)
T cd06606 154 IETG---EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP---MAALY------------- 214 (260)
T ss_pred cccc---ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch---HHHHH-------------
Confidence 4210 0123346788999999998888999999999999999999999999654311 00111
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.+.........+...+..+.+++.+||..||++||++.|+++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 215 KIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred hccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 0111111112333445679999999999999999999999864
No 324
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-36 Score=308.86 Aligned_cols=276 Identities=25% Similarity=0.360 Sum_probs=204.9
Q ss_pred CCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeeccc--CcceEEEEE
Q 009404 229 GSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG--KRAMRLLVF 305 (535)
Q Consensus 229 ~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~--~~~~~~lV~ 305 (535)
..+.||+|+||.||+|+.+ .|+.||||.++........+..-+|+++|++++|+|||+++++=.+... ......+||
T Consensus 17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm 96 (732)
T KOG4250|consen 17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM 96 (732)
T ss_pred ehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence 3467999999999999965 5999999999987766777789999999999999999999987433220 033568999
Q ss_pred ecCCCCCHHHhhhhcc-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe--CCCCc--EEEEecCCccc
Q 009404 306 EFMPNGNLRDCLDGVL-VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL--DENLN--AKITDLGMAKR 380 (535)
Q Consensus 306 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl--~~~~~--vkL~DFGla~~ 380 (535)
|||++|||+..|++.. ..++++.+.+.++.+++.||.|||+++ |+||||||.||++ .++++ .||+|||.|+.
T Consensus 97 EyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are 173 (732)
T KOG4250|consen 97 EYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE 173 (732)
T ss_pred eecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence 9999999999997643 356999999999999999999999998 9999999999999 34344 79999999998
Q ss_pred cccCCCCCCCCCCCccccCccccCccccc-cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
+..+. ....+.||..|++||.+. .+.|+...|.|||||++|+..||..||-.......-.-..|........+
T Consensus 174 l~d~s------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 174 LDDNS------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred CCCCC------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 87653 456789999999999998 48899999999999999999999999965433211111122111111111
Q ss_pred cccccCCCC------CCCCCCC----HHHHHHHHHHHHHhcccCCCCCC--CHHHHHHHHhhhCCC
Q 009404 460 TVISELPDP------RLKGDFP----KEEMQIMAYLAKECLQLDPDARP--TMSEVVQILSTIAPD 513 (535)
Q Consensus 460 ~~~~~~~~~------~l~~~~~----~~~~~~l~~li~~cl~~dP~~RP--t~~evl~~L~~l~~~ 513 (535)
..+...... ....++| ......+-..+..+|..+|++|. .+.+....+..|...
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 000000000 0011112 22333455667778889999998 777777777766543
No 325
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.4e-35 Score=291.97 Aligned_cols=265 Identities=26% Similarity=0.351 Sum_probs=196.1
Q ss_pred CCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccC-CCCccceeeeeeecccCcceEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
|+..+.||+|+||+||+|+..+ ++.|+||++.............+|+..+++++ |+|++++++++.+ ....++|
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~----~~~~~lv 76 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE----NDELYFV 76 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc----CCcEEEE
Confidence 4567889999999999999864 78999999876543333334567999999998 9999999999876 4567999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+ +|+|.+++.......+++..+..++.|++.+|.|||+++ ++|+||+|+||++++++.++|+|||++......
T Consensus 77 ~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 77 FEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSR 152 (283)
T ss_pred EecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence 9999 889999987654456899999999999999999999998 999999999999999999999999999765432
Q ss_pred CCCCCCCCCCccccCccccCccccc-cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh----------hhccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAM-VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV----------LWATP 453 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~----------~~~~~ 453 (535)
. ......++..|+|||.+. ...++.++|+||||+++|||++|+.||............ .|...
T Consensus 153 ~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (283)
T cd07830 153 P------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEG 226 (283)
T ss_pred C------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhH
Confidence 1 122345788999999875 455799999999999999999999998644321110000 00000
Q ss_pred c-cc-CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 454 R-LQ-DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 454 ~-~~-~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
. +. .....+.......+....+ .....+.+++.+||+.+|++|||+.|++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 227 YKLASKLGFRFPQFAPTSLHQLIP-NASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred hhhhccccccccccccccHHHHcc-cCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0 00 0000000000000000011 114568899999999999999999999864
No 326
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=8.2e-35 Score=294.02 Aligned_cols=267 Identities=19% Similarity=0.259 Sum_probs=193.2
Q ss_pred cccceeCceEEEEEEEcCCcEEEEEEeccC-CCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCC
Q 009404 231 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQ-GGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMP 309 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~-~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~ 309 (535)
+.+|.|+++.||++.. +++.||||++... ........+.+|+++++.++|+||+++++++.+ ....+++|||++
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~----~~~~~~~~e~~~ 82 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV----DSELYVVSPLMA 82 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec----CCeEEEEEeccC
Confidence 3445555655555554 5899999999765 233344568999999999999999999998876 446799999999
Q ss_pred CCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCC--
Q 009404 310 NGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP-- 387 (535)
Q Consensus 310 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~-- 387 (535)
+|+|.+++.......+++.....++.|++.||+|||+++ |+||||||+||+++.++.+||+|||.+.........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 83 YGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 999999998765566899999999999999999999998 999999999999999999999999998765432211
Q ss_pred CCCCCCCccccCccccCcccccc--CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcc---------cccc
Q 009404 388 SCSSSPARMQGTFGYFAPEYAMV--GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWAT---------PRLQ 456 (535)
Q Consensus 388 ~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~---------~~~~ 456 (535)
..........++..|+|||.+.. ..++.++||||||+++|||++|..||........ ...... ....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 237 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM--LLEKVRGTVPCLLDKSTYP 237 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCccccccCchh
Confidence 11122234457788999999865 3578899999999999999999999964322110 000000 0000
Q ss_pred Cccccccc----CCCC----CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 457 DSGTVISE----LPDP----RLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 457 ~~~~~~~~----~~~~----~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
........ ..++ ......+......+.+++.+||+.||++|||+.|+++.-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 238 LYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred hhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 00000000 0000 011122334456788999999999999999999999853
No 327
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=3.4e-35 Score=293.95 Aligned_cols=268 Identities=22% Similarity=0.327 Sum_probs=194.9
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
++|+..+.||+|++|+||+|... +++.||+|.+...... .....+.+|+++++.++||||+++++++.+ ....+
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~ 77 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS----EKRLY 77 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec----CCeEE
Confidence 46888899999999999999976 5899999998654322 223457889999999999999999999875 44779
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CCcEEEEecCCcccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE-NLNAKITDLGMAKRL 381 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~-~~~vkL~DFGla~~~ 381 (535)
+||||++ ++|.+++.......+++..+..++.||+.||+|||+++ ++|+||+|+||++++ ++.+||+|||++...
T Consensus 78 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 78 LVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAF 153 (294)
T ss_pred EEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEccccccccc
Confidence 9999995 58888886554445788899999999999999999998 999999999999985 567999999999765
Q ss_pred ccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhh--hcccc----
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL--WATPR---- 454 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~--~~~~~---- 454 (535)
.... .......+++.|+|||++.+ ..++.++||||||+++|+|++|+.||............. ...+.
T Consensus 154 ~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 228 (294)
T PLN00009 154 GIPV-----RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETW 228 (294)
T ss_pred CCCc-----cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence 4321 11223456889999998865 457899999999999999999999996533221111000 00000
Q ss_pred -----ccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 455 -----LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 455 -----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+.+.............. ......+..+.+++.+||+.+|++||++.++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 229 PGVTSLPDYKSAFPKWPPKDLA-TVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred cccccchhhhhhcccCCCCCHH-HhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000000000000 0112234558899999999999999999999973
No 328
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3.4e-35 Score=288.21 Aligned_cols=248 Identities=28% Similarity=0.389 Sum_probs=193.0
Q ss_pred cceeCceEEEEEEEcC-CcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCC
Q 009404 233 VGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMP 309 (535)
Q Consensus 233 LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~ 309 (535)
||.|+||.||+++..+ ++.+++|.+..... ......+.+|+++++.++||||+++++.+.. ....+++|||++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~lv~e~~~ 76 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG----KKNLYLVMEYLP 76 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec----CcEEEEEEecCC
Confidence 6899999999999875 89999999875432 1334558899999999999999999988765 456799999999
Q ss_pred CCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCC--
Q 009404 310 NGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP-- 387 (535)
Q Consensus 310 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~-- 387 (535)
+++|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++.........
T Consensus 77 ~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 151 (265)
T cd05579 77 GGDLASLLENV--GSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL 151 (265)
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc
Confidence 99999999764 36899999999999999999999998 999999999999999999999999998765433110
Q ss_pred -CCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 388 -SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 388 -~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
..........++..|+|||.......+.++||||||+++|||++|..||........ ... +.
T Consensus 152 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~---~~~--------------~~ 214 (265)
T cd05579 152 NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI---FQN--------------IL 214 (265)
T ss_pred ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHH--------------Hh
Confidence 000122334577899999999888899999999999999999999999964332110 000 00
Q ss_pred CCCCCCCCCHH--HHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 467 DPRLKGDFPKE--EMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 467 ~~~l~~~~~~~--~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.... ..+.. .+..+.+++.+||+.+|++|||+.++.+.|.
T Consensus 215 ~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 215 NGKI--EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred cCCc--CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0000 11111 2456889999999999999999966655544
No 329
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3.2e-35 Score=299.87 Aligned_cols=278 Identities=22% Similarity=0.300 Sum_probs=202.4
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
.++|+..+.||+|+||.||+|... +++.||+|++..... ......+.+|+.+|+.++||||+++++++..........
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367888899999999999999875 489999999975432 233345778999999999999999999886544445578
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||+. ++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999995 6899998653 45899999999999999999999998 999999999999999999999999999766
Q ss_pred ccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccc----c-
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPR----L- 455 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~----~- 455 (535)
....... ........++..|+|||.+.. ..++.++||||||+++|||++|+.||.................. .
T Consensus 158 ~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 158 SSSPTEH-KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL 236 (334)
T ss_pred cccCcCC-CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence 4432111 112234568899999998765 46899999999999999999999999643221100000000000 0
Q ss_pred -----cCcccccccCCCCC-CC-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 456 -----QDSGTVISELPDPR-LK-GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 456 -----~~~~~~~~~~~~~~-l~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.............. .. .......+..+.+++.+||+.+|++|||+.+++..-+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~ 296 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPF 296 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChh
Confidence 00000000000000 00 0001123566899999999999999999999998533
No 330
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=6.3e-35 Score=284.95 Aligned_cols=251 Identities=26% Similarity=0.377 Sum_probs=201.5
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||.|+||.||++... +++.+++|++...... .....+.+|+++++.++|+|++++.+.+.. ....++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~----~~~~~l 76 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE----KGKLCI 76 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec----CCEEEE
Confidence 4677889999999999999976 4889999999765432 344568899999999999999999998876 357799
Q ss_pred EEecCCCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 304 VFEFMPNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
|+||+++++|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 153 (258)
T cd08215 77 VMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVL 153 (258)
T ss_pred EEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeec
Confidence 999999999999997643 356999999999999999999999998 999999999999999999999999999876
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
.... .......|++.|+|||.+....++.++||||||+++|+|++|+.||...... ......
T Consensus 154 ~~~~-----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~~~~~---------- 215 (258)
T cd08215 154 SSTV-----DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL---ELALKI---------- 215 (258)
T ss_pred ccCc-----ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH---HHHHHH----------
Confidence 5432 1122346788999999998888999999999999999999999998543211 000000
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.....+ ..+...+..+.+++.+||..+|++|||+.|+++.
T Consensus 216 -~~~~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 216 -LKGQYP----PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred -hcCCCC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000011 1122334558899999999999999999999864
No 331
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.7e-35 Score=287.38 Aligned_cols=244 Identities=23% Similarity=0.296 Sum_probs=185.1
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCCCC--ChhHHHHHHHHHH-hccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP--NADSVFLTEVDML-SRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~--~~~~~~~~Ei~~l-~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.||+|+||.||+|... +++.||||++...... .....+..|..++ ...+|+|++++++++.. ....++|||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~----~~~~~lv~e 77 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS----KDYLYLVME 77 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc----CCeEEEEEe
Confidence 46999999999999875 4889999998643211 1112244555444 44589999999999875 446799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
|+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 78 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~--- 149 (260)
T cd05611 78 YLNGGDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE--- 149 (260)
T ss_pred ccCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc---
Confidence 99999999999754 45899999999999999999999998 99999999999999999999999999875432
Q ss_pred CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCC
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELP 466 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (535)
.....++..|+|||.+.+..++.++||||||+++|||++|..||.......... .... ...
T Consensus 150 ------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~----------~~~- 210 (260)
T cd05611 150 ------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFD--NILS----------RRI- 210 (260)
T ss_pred ------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHH--HHHh----------ccc-
Confidence 123457888999999988888999999999999999999999996432211000 0000 000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 467 DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 467 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
..........+..+.+++.+||+.+|++||++.++.+.|
T Consensus 211 --~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 211 --NWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred --CCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 000011112345589999999999999999776555543
No 332
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=298.21 Aligned_cols=269 Identities=25% Similarity=0.369 Sum_probs=213.1
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
+.|..-++||+|+||.||-.+..+ |+.+|.|.+.... ....+...+.|-.+|.+++.+.||.+--.+.. ...+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeT----kd~L 260 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFET----KDAL 260 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecC----CCce
Confidence 668888999999999999998654 9999999886442 22334457889999999999999988655554 4578
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++|+..|+||+|.-+|.......+++..++.++.+|+.||++||+.. |++|||||+|||||+.|+++|+|+|+|..+
T Consensus 261 ClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 261 CLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred EEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEec
Confidence 99999999999999998777678999999999999999999999998 999999999999999999999999999988
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
.... .....+||.+|||||++.++.|+...|.|||||+||||+.|+.||.....+....-+ ..+
T Consensus 338 ~~g~------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEv---drr------- 401 (591)
T KOG0986|consen 338 PEGK------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEV---DRR------- 401 (591)
T ss_pred CCCC------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHH---HHH-------
Confidence 7643 234458999999999999999999999999999999999999999654332111000 000
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcccccCCCCCccCcccccc
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRNISLNLFQPVAWRR 532 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~~~~~~~~~~~~~~~~~~ 532 (535)
+. .-...++...++...+|.+..|..||.+|.....- .....-..+++..++|++
T Consensus 402 ---~~--~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~-----------ga~evk~HpfFk~lnw~r 456 (591)
T KOG0986|consen 402 ---TL--EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGE-----------GAQEVKEHPFFKDLNWRR 456 (591)
T ss_pred ---Hh--cchhhcccccCHHHHHHHHHHHccCHHHhccCCCc-----------CcchhhhCcccccCCHhH
Confidence 00 00123455566678889999999999999865421 223444567777777764
No 333
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=5.2e-35 Score=293.07 Aligned_cols=254 Identities=27% Similarity=0.412 Sum_probs=193.1
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
++|+..+.||+|+||.||+|.+.+ ++.||||+++..........+.+|+.++... .||||+++++++.+ ....+
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~----~~~~~ 90 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT----DSDVF 90 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec----CCeEE
Confidence 557778999999999999999875 8999999997654434445577788777776 59999999999876 44679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHE-AAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++|||++ ++|.+++... ...+++..+..++.|++.||+|||+ .+ |+||||+|+||++++++.+||+|||++...
T Consensus 91 ~v~e~~~-~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 91 ICMELMS-TCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred EEeeccC-cCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 9999985 5777776543 2468999999999999999999997 46 999999999999999999999999998765
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCC----CCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccC
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGR----ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQD 457 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~ 457 (535)
.... ......++..|+|||.+.... ++.++||||||+++|||++|+.||.......+ ...... ..
T Consensus 166 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~----~~ 234 (296)
T cd06618 166 VDSK------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE-VLTKIL----QE 234 (296)
T ss_pred cCCC------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHH-HHHHHh----cC
Confidence 4321 112234778899999987554 78899999999999999999999964221100 000000 00
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 458 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
. .+... .....+..+.+++.+||+.||++||++.+++++..
T Consensus 235 ~--------~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 235 E--------PPSLP--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred C--------CCCCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 0 00000 01123345889999999999999999999998654
No 334
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4.6e-35 Score=291.17 Aligned_cols=269 Identities=25% Similarity=0.334 Sum_probs=196.8
Q ss_pred CCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
|+..+.||.|+||.||+|+..+ ++.+|+|++.... .......+.+|+++++.++|+|++++++++.+.. ....++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG--KGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC--CCcEEEE
Confidence 4567889999999999999764 8899999998653 2233345889999999999999999999987632 2467999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||++ ++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 79 ~e~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 79 FEYMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred ecccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 99997 48998886532 46899999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhh-ccccccCccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW-ATPRLQDSGTVI 462 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 462 (535)
.. .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.............. ............
T Consensus 154 ~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 154 NS----ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred Cc----ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccc
Confidence 21 11223356788999997764 4578999999999999999999999965432211110000 000000000000
Q ss_pred ccC-----C------CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 463 SEL-----P------DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 463 ~~~-----~------~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..+ . ...+...+...++..+.+++.+||+.+|++||++.++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000 0 0000000111125568899999999999999999999874
No 335
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=7.5e-35 Score=284.68 Aligned_cols=249 Identities=27% Similarity=0.336 Sum_probs=199.8
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||+|+||.||+++.. +++.+++|.+..... ......+.+|+++++.++|+||+++.+++.+ ....++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~ 76 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD----GNKLCI 76 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc----CCEEEE
Confidence 4677889999999999999865 588999999875432 2334457889999999999999999988876 357799
Q ss_pred EEecCCCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 304 VFEFMPNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
||||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++...
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~ 153 (256)
T cd08530 77 VMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVL 153 (256)
T ss_pred EehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhh
Confidence 999999999999986532 245899999999999999999999998 999999999999999999999999999876
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
.... .....++..|+|||.+....++.++|+||||+++|||++|+.||...... ......
T Consensus 154 ~~~~-------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---~~~~~~---------- 213 (256)
T cd08530 154 KKNM-------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ---DLRYKV---------- 213 (256)
T ss_pred ccCC-------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH----------
Confidence 5431 12235788999999999988999999999999999999999999643321 000000
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.. ......+......+.+++.+||+.+|++|||+.|+++.
T Consensus 214 -~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 214 -QR----GKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred -hc----CCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 00111223445668999999999999999999999864
No 336
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.3e-36 Score=323.05 Aligned_cols=261 Identities=28% Similarity=0.415 Sum_probs=195.4
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeec------
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEF------ 294 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------ 294 (535)
.-..+|++.++||+||||.||+++.+ ||+.+|||++...........+.+|+..|++|+|||||+++....+.
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 44567888899999999999999976 79999999998775445555688999999999999999998543220
Q ss_pred ------------------------------------------------c-------------------------------
Q 009404 295 ------------------------------------------------R------------------------------- 295 (535)
Q Consensus 295 ------------------------------------------------~------------------------------- 295 (535)
.
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0
Q ss_pred ----------------------c--------CcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHH
Q 009404 296 ----------------------G--------KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLH 345 (535)
Q Consensus 296 ----------------------~--------~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH 345 (535)
. ....+||=||||+...|+++++.+... -.....++++++|++||+|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHHH
Confidence 0 013467889999998888888764321 146788999999999999999
Q ss_pred hcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc----c--------CCCCC-CCCCCCccccCccccCccccccC-
Q 009404 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK----A--------DGLPS-CSSSPARMQGTFGYFAPEYAMVG- 411 (535)
Q Consensus 346 ~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~----~--------~~~~~-~~~~~~~~~gt~~y~aPE~~~~~- 411 (535)
++| ||||||||.||++|++..|||+|||+|.... . ..... .....+...||.-|+|||.+.+.
T Consensus 715 ~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 999 9999999999999999999999999998722 0 00111 12245668899999999998754
Q ss_pred --CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCCCCC--CCCHHHHHHHHHHHH
Q 009404 412 --RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKG--DFPKEEMQIMAYLAK 487 (535)
Q Consensus 412 --~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~l~~li~ 487 (535)
.|+.|+|+||+||||+||+. ||.....+. . .+..+.+..+.. .+.......=+.+++
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa---~-------------iL~~LR~g~iP~~~~f~~~~~~~e~slI~ 852 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSMERA---S-------------ILTNLRKGSIPEPADFFDPEHPEEASLIR 852 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchHHHH---H-------------HHHhcccCCCCCCcccccccchHHHHHHH
Confidence 49999999999999999986 454332211 0 111111221111 122223333577999
Q ss_pred HhcccCCCCCCCHHHHHH
Q 009404 488 ECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 488 ~cl~~dP~~RPt~~evl~ 505 (535)
++++.||.+|||+.|+|.
T Consensus 853 ~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 853 WLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHhcCCCccCCCHHHHhh
Confidence 999999999999999986
No 337
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.1e-34 Score=291.18 Aligned_cols=276 Identities=25% Similarity=0.335 Sum_probs=199.3
Q ss_pred HHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecc---
Q 009404 221 EHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFR--- 295 (535)
Q Consensus 221 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--- 295 (535)
+...++|+..+.||+|+||.||+|... +++.||+|+++.... ......+.+|+++++.++||||+++++++.+..
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 345678899999999999999999986 488999999975432 222345778999999999999999999987643
Q ss_pred ---cCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEE
Q 009404 296 ---GKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKI 372 (535)
Q Consensus 296 ---~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL 372 (535)
......++|+||+++ +|.+++... ...+++..+..++.|++.||+|||+.+ |+|+||+|+||++++++.+||
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEe
Confidence 112367999999975 777777653 346899999999999999999999998 999999999999999999999
Q ss_pred EecCCccccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhc
Q 009404 373 TDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA 451 (535)
Q Consensus 373 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~ 451 (535)
+|||++........ .......++..|+|||.+.. ..++.++||||||+++|||++|+.||...............
T Consensus 158 ~dfg~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~ 233 (302)
T cd07864 158 ADFGLARLYNSEES----RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRL 233 (302)
T ss_pred CcccccccccCCcc----cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 99999987654321 11122345778999998764 45789999999999999999999999643321111000000
Q ss_pred -cccccCcccccccCC-----C------CCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 452 -TPRLQDSGTVISELP-----D------PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 452 -~~~~~~~~~~~~~~~-----~------~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..........+.+.. + ...... ....+..+.+++..||+.||++||++.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred hCCCChhhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000000000000000 0 000000 11124568899999999999999999999864
No 338
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4e-36 Score=307.42 Aligned_cols=245 Identities=24% Similarity=0.379 Sum_probs=193.9
Q ss_pred cccceeCceEEEEEEEcC-CcEEEEEEeccC---CCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQ---GGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~---~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
.+||+|+|-+||+|.+.. |-.||--.++.. ..+...+.|..|+.+|+.|+||||++++.++.+... ....+|+|
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n--~~in~iTE 123 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN--KTINFITE 123 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC--ceeeeeee
Confidence 569999999999998753 777776554422 334444679999999999999999999999887553 46789999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC-CCCcEEEEecCCccccccCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD-ENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~-~~~~vkL~DFGla~~~~~~~ 385 (535)
.|..|+|+.|+.+. +.++...+..|++||++||.|||++. |||+|||||-+||||+ ..|.|||+|+|||......
T Consensus 124 L~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s- 199 (632)
T KOG0584|consen 124 LFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS- 199 (632)
T ss_pred cccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhcc-
Confidence 99999999999876 56888999999999999999999986 6799999999999997 5688999999999987643
Q ss_pred CCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccC
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISEL 465 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
......|||.|||||... ..|++..||||||+-++||.|+..||..-.... .+... ++..+
T Consensus 200 ------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A--QIYKK----------V~SGi 260 (632)
T KOG0584|consen 200 ------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA--QIYKK----------VTSGI 260 (632)
T ss_pred ------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH--HHHHH----------HHcCC
Confidence 233478999999999665 889999999999999999999999996433221 11111 11111
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 466 PDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 466 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
....+..-- ...+.+||.+|+.. .++|||+.|+|+
T Consensus 261 KP~sl~kV~----dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 261 KPAALSKVK----DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred CHHHhhccC----CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 111111111 13378899999999 999999999996
No 339
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.6e-34 Score=285.87 Aligned_cols=269 Identities=23% Similarity=0.319 Sum_probs=195.9
Q ss_pred CCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCC-hhHHHHHHHHHHhcc---CCCCccceeeeeeeccc-Ccce
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPN-ADSVFLTEVDMLSRL---HHCHVVPLVGYCSEFRG-KRAM 300 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~-~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~~~~-~~~~ 300 (535)
|++.+.||+|+||.||+|++++ ++.||+|+++...... ....+.+|+.+++.+ +|+|++++++++..... ....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 4567889999999999999875 8999999997543222 223466787776665 69999999999876432 2234
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.+++|||++ ++|.+++.......+++..+..++.|+++||+|||+.+ ++|+||+|+||++++++.++|+|||++..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCccee
Confidence 799999996 58999987654456999999999999999999999998 99999999999999999999999999877
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh-hhccccc----
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV-LWATPRL---- 455 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~-~~~~~~~---- 455 (535)
...... .....++..|+|||.+....++.++|+||||+++|||++|..||............ .......
T Consensus 157 ~~~~~~------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07838 157 YSFEMA------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEW 230 (287)
T ss_pred ccCCcc------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhc
Confidence 643321 12334788899999999889999999999999999999999988643321110000 0000000
Q ss_pred cCc----ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 456 QDS----GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 456 ~~~----~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
... ............ ..........+.+++.+||+.||++||++.|++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 231 PRNVSLPRSSFPSYTPRSF-KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CCCcccchhhcccccccch-hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 000 000000000000 11112345667899999999999999999999853
No 340
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.1e-34 Score=289.47 Aligned_cols=257 Identities=24% Similarity=0.312 Sum_probs=196.6
Q ss_pred CCCCCcccceeCceEEEEEEEc----CCcEEEEEEeccCC---CCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccC
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT----DGRIVAVKRFKTQG---GPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGK 297 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~----~g~~vaVK~l~~~~---~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 297 (535)
+|+..+.||+|++|.||+++.. +++.||||+++... .......+.+|++++..+ +||||+++++.+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~---- 76 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT---- 76 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec----
Confidence 3667789999999999999753 47889999987432 122334578999999999 69999999988765
Q ss_pred cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCC
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGl 377 (535)
....++||||+++++|.+++... ..+++..+..++.|+++||.|||+.+ ++|+||+|+||+++.++.++|+|||+
T Consensus 77 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~ 151 (288)
T cd05583 77 DTKLHLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGL 151 (288)
T ss_pred CCEEEEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECcc
Confidence 44678999999999999998653 45889999999999999999999988 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCccccCccccCccccccCC--CCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccc
Q 009404 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR--ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455 (535)
Q Consensus 378 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~ 455 (535)
+........ .......|+..|+|||.+.... .+.++||||||+++|||++|..||.......... ....
T Consensus 152 ~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~--~~~~--- 222 (288)
T cd05583 152 SKEFLAEEE----ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQS--EISR--- 222 (288)
T ss_pred ccccccccc----cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHH--HHHH---
Confidence 876543321 1122345788999999987655 7889999999999999999999985322111000 0000
Q ss_pred cCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 456 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
..... .+ ..+......+.+++.+||+.||++|||+.++.+.|...
T Consensus 223 ----~~~~~--~~----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 223 ----RILKS--KP----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred ----HHHcc--CC----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 00000 01 12223345588999999999999999998888776653
No 341
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-35 Score=300.70 Aligned_cols=252 Identities=27% Similarity=0.330 Sum_probs=207.1
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcc
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 299 (535)
.-...|.+...||+|.|+.|.+|++. .+..||+|.+...... .....+.+|+++|..++|||||+++.+... ..
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t----~~ 128 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIET----EA 128 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeee----cc
Confidence 34567888999999999999999875 4899999999765432 223448899999999999999999999876 55
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
.+|+||||..+|.+++||.+. ..+.+..+..++.|+.+|++|+|++. |+|||||++||||+.+.++||+|||++.
T Consensus 129 ~lylV~eya~~ge~~~yl~~~--gr~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~ 203 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKH--GRMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFST 203 (596)
T ss_pred eeEEEEEeccCchhHHHHHhc--ccchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccce
Confidence 789999999999999999865 44667889999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRA-SLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS 458 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
.+... .....+.|++.|.|||++.+..+ .++.|+||+|++||.|+.|..||+...-..
T Consensus 204 ~~~~~------~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--------------- 262 (596)
T KOG0586|consen 204 FFDYG------LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE--------------- 262 (596)
T ss_pred eeccc------ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc---------------
Confidence 88643 34567889999999999988776 689999999999999999999997533221
Q ss_pred ccccccCCCCCCCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 459 GTVISELPDPRLKG--DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 459 ~~~~~~~~~~~l~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
+.++.+.+ ..|-.......++++++|-.+|.+|++++++.+.-+.
T Consensus 263 ------Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 263 ------LRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred ------ccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhccc
Confidence 11111111 1122233446779999999999999999999986543
No 342
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2e-34 Score=287.74 Aligned_cols=253 Identities=24% Similarity=0.340 Sum_probs=194.4
Q ss_pred CCCCCcccceeCceEEEEEEE----cCCcEEEEEEeccCC---CCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccC
Q 009404 226 KFSGSNIVGQGGSSYVYRGQL----TDGRIVAVKRFKTQG---GPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGK 297 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~----~~g~~vaVK~l~~~~---~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 297 (535)
+|+..+.||+|+||.||++.. .+|+.||+|++.... .....+.+.+|++++..+ +|+||+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT---- 76 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec----
Confidence 467778999999999999986 368999999997532 122334578899999999 69999999988765
Q ss_pred cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCC
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGl 377 (535)
+...++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+|||+++++.+||+|||+
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~ 151 (290)
T cd05613 77 DTKLHLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGL 151 (290)
T ss_pred CCeEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCcc
Confidence 34678999999999999999754 45889999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCccccCccccCccccccC--CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccc
Q 009404 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG--RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRL 455 (535)
Q Consensus 378 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~ 455 (535)
+........ .......|+..|+|||.+... .++.++||||||+++|+|++|..||.......... ...
T Consensus 152 ~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~--~~~---- 221 (290)
T cd05613 152 SKEFHEDEV----ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQA--EIS---- 221 (290)
T ss_pred ceecccccc----cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHH--HHH----
Confidence 986543321 112235688899999998753 46789999999999999999999985322211100 000
Q ss_pred cCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 009404 456 QDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQI 506 (535)
Q Consensus 456 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 506 (535)
..+... ....+......+.+++.+||+.||++|| ++.+++..
T Consensus 222 -------~~~~~~--~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 222 -------RRILKS--EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred -------HHhhcc--CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 000000 0112333455688999999999999997 77777664
No 343
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.3e-34 Score=289.51 Aligned_cols=273 Identities=23% Similarity=0.290 Sum_probs=195.4
Q ss_pred CCCCCcccceeCceEEEEEEEcC---CcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTD---GRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~---g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
+|+..+.||+|+||.||+|.... ++.||+|.+.... .......+.+|+.+++.++||||+++++++.+.. ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 78 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHA--DKS 78 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCC--Cce
Confidence 36777889999999999999754 7899999998632 1222345788999999999999999999997642 246
Q ss_pred EEEEEecCCCCCHHHhhhhcc---cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC----CCcEEEE
Q 009404 301 RLLVFEFMPNGNLRDCLDGVL---VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE----NLNAKIT 373 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~----~~~vkL~ 373 (535)
.++||||+++ +|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++. ++.+||+
T Consensus 79 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~ 154 (316)
T cd07842 79 VYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIG 154 (316)
T ss_pred EEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEEC
Confidence 8999999964 7777764322 125889999999999999999999998 999999999999999 9999999
Q ss_pred ecCCccccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhh---
Q 009404 374 DLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL--- 449 (535)
Q Consensus 374 DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~--- 449 (535)
|||++......... ........++..|+|||.+.+ ..++.++||||||+++|||++|+.||.............
T Consensus 155 Dfg~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 232 (316)
T cd07842 155 DLGLARLFNAPLKP--LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRD 232 (316)
T ss_pred CCccccccCCCccc--ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHH
Confidence 99999876443211 112234567889999998765 457899999999999999999999997543322000000
Q ss_pred -------hcc----------ccccCcccccccCCCCCCC-----CCCCH--HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 450 -------WAT----------PRLQDSGTVISELPDPRLK-----GDFPK--EEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 450 -------~~~----------~~~~~~~~~~~~~~~~~l~-----~~~~~--~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
... ....+.............. ...+. .....+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 233 QLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 0000000000000000000 00000 23345889999999999999999999986
Q ss_pred H
Q 009404 506 I 506 (535)
Q Consensus 506 ~ 506 (535)
+
T Consensus 313 ~ 313 (316)
T cd07842 313 H 313 (316)
T ss_pred C
Confidence 4
No 344
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-36 Score=305.44 Aligned_cols=249 Identities=23% Similarity=0.350 Sum_probs=198.2
Q ss_pred CCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEe
Q 009404 228 SGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 228 ~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
.+...||.|+||.||+|..++ +-..|-|++.... .+..++|+-|+++|...+||+||+|++.|.. .+.++++.|
T Consensus 35 eIiGELGDGAFGKVyKA~nket~~lAAaKvIetks-eEELEDylVEIeILa~CdHP~ivkLl~ayy~----enkLwiliE 109 (1187)
T KOG0579|consen 35 EIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS-EEELEDYLVEIEILAECDHPVIVKLLSAYYF----ENKLWILIE 109 (1187)
T ss_pred HHHhhhcCccchhhhhhhcccchhhhhhhhhcccc-hhHHhhhhhhhhhhhcCCChHHHHHHHHHhc----cCceEEEEe
Confidence 345669999999999998875 4445666665543 4555679999999999999999999987765 446799999
Q ss_pred cCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCC
Q 009404 307 FMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGL 386 (535)
Q Consensus 307 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~ 386 (535)
||+||-....+-. ....+.+.++..+++|++.||.|||++. |||||||+.|||++-+|.++|+|||.+......
T Consensus 110 FC~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t-- 183 (1187)
T KOG0579|consen 110 FCGGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKST-- 183 (1187)
T ss_pred ecCCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchhH--
Confidence 9999999887754 3466999999999999999999999998 999999999999999999999999998754332
Q ss_pred CCCCCCCCccccCccccCccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 387 PSCSSSPARMQGTFGYFAPEYAM-----VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 387 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
......+.||+.|||||+.. ..+|..++||||||++|.||.-+.+|.+...+- .....
T Consensus 184 ---~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM---RVllK----------- 246 (1187)
T KOG0579|consen 184 ---RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM---RVLLK----------- 246 (1187)
T ss_pred ---HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH---HHHHH-----------
Confidence 12345678999999999875 578999999999999999999999997654321 10000
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+.+--.|.+ .-|......+.+++.+||..||+.||++.+++++
T Consensus 247 iaKSePPTL--lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 247 IAKSEPPTL--LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HhhcCCCcc--cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 111112222 2355666779999999999999999999999874
No 345
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=8.5e-35 Score=297.18 Aligned_cols=275 Identities=23% Similarity=0.308 Sum_probs=200.4
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeeccc-Ccce
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG-KRAM 300 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~-~~~~ 300 (535)
.++|...+.||+|+||+||+++.. +++.||||.+.... .......+.+|+.+++.++|+||+++++++..... ....
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 456888899999999999999865 58999999987532 22233457789999999999999999998765321 1235
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++||||+. ++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++..
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 799999995 7899888653 45899999999999999999999998 99999999999999999999999999986
Q ss_pred cccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhh-hccccc---
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL-WATPRL--- 455 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~-~~~~~~--- 455 (535)
..... .......++..|+|||.+.. ..++.++||||||+++|+|++|+.||............. ......
T Consensus 158 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 232 (337)
T cd07858 158 TSEKG-----DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEED 232 (337)
T ss_pred cCCCc-----ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHH
Confidence 64321 11223457889999998764 468999999999999999999999996432111000000 000000
Q ss_pred ------cCccccccc---CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--Hhhh
Q 009404 456 ------QDSGTVISE---LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI--LSTI 510 (535)
Q Consensus 456 ------~~~~~~~~~---~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~l 510 (535)
......+.. ..++... ......+..+.+++.+||+.+|++|||+.|+++. +..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 233 LGFIRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hhhcCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 000000000 0011110 0112345668899999999999999999999987 5544
No 346
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.8e-34 Score=288.84 Aligned_cols=244 Identities=24% Similarity=0.385 Sum_probs=193.1
Q ss_pred cccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCC
Q 009404 231 NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMP 309 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~ 309 (535)
.+||+|+||.||++... +++.||||++.... ......+.+|+.+++.++|+|++++++++.. ....++||||++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~ 100 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLV----GDELWVVMEFLE 100 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc-hhHHHHHHHHHHHHHhcCCcchhheeeEEEe----CCEEEEEEecCC
Confidence 56999999999999875 58999999986443 2344568899999999999999999999876 456799999999
Q ss_pred CCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCC
Q 009404 310 NGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSC 389 (535)
Q Consensus 310 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 389 (535)
+++|.+++.. ..+++.....++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 101 ~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~---- 170 (292)
T cd06657 101 GGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---- 170 (292)
T ss_pred CCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc----
Confidence 9999998754 35899999999999999999999998 9999999999999999999999999987654321
Q ss_pred CCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCC
Q 009404 390 SSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469 (535)
Q Consensus 390 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (535)
.......++..|+|||.+....++.++|+||||+++|+|++|..||........... +.....+.
T Consensus 171 -~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~--------------~~~~~~~~ 235 (292)
T cd06657 171 -PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM--------------IRDNLPPK 235 (292)
T ss_pred -ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--------------HHhhCCcc
Confidence 112334678899999999888899999999999999999999999864321110000 00000111
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+. .....+..+.+++.+||+.+|.+||++.++++.
T Consensus 236 ~~--~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 236 LK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred cC--CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 10 011223457889999999999999999999983
No 347
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.5e-34 Score=280.45 Aligned_cols=248 Identities=27% Similarity=0.466 Sum_probs=199.8
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|+..+.||+|++|.||+++.. +++.|++|.+...... .....+.+|++++++++|+|++++++++.+ ....++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~ 76 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET----SDSLYI 76 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe----CCEEEE
Confidence 4677889999999999999875 4789999999865432 234568899999999999999999998875 356799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
+|||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.....
T Consensus 77 v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 151 (254)
T cd06627 77 ILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLND 151 (254)
T ss_pred EEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCC
Confidence 99999999999999764 56899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVIS 463 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (535)
... ......++..|+|||......++.++|||+||+++|+|++|+.||...... . ..+...
T Consensus 152 ~~~-----~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~---~-~~~~~~---------- 212 (254)
T cd06627 152 VSK-----DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM---A-ALFRIV---------- 212 (254)
T ss_pred Ccc-----cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH---H-HHHHHh----------
Confidence 321 123346788999999988888899999999999999999999998643211 0 011000
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 464 ELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
....+ ..+...+..+.+++.+||..+|++|||+.+++.
T Consensus 213 ~~~~~----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 213 QDDHP----PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ccCCC----CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 00011 122233456889999999999999999999985
No 348
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.4e-34 Score=285.75 Aligned_cols=243 Identities=26% Similarity=0.343 Sum_probs=185.6
Q ss_pred ccceeCceEEEEEEEc-CCcEEEEEEeccCCCC--ChhHHHHHHHH---HHhccCCCCccceeeeeeecccCcceEEEEE
Q 009404 232 IVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP--NADSVFLTEVD---MLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 232 ~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~--~~~~~~~~Ei~---~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~ 305 (535)
.||+|+||.||++... +++.||+|.+...... .....+..|.. .++...||||+++++++.+ ....++||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~v~ 76 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT----PDKLSFIL 76 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec----CCEEEEEE
Confidence 4899999999999875 4889999998754321 21222444443 3444579999999988876 44679999
Q ss_pred ecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 306 EFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 306 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++......
T Consensus 77 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~- 150 (278)
T cd05606 77 DLMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK- 150 (278)
T ss_pred ecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCcc-
Confidence 999999999988653 45899999999999999999999998 999999999999999999999999998765322
Q ss_pred CCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccccc
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (535)
......|+..|+|||.+..+ .++.++||||||+++|||++|+.||............. . ..
T Consensus 151 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~-~-----------~~ 212 (278)
T cd05606 151 ------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR-M-----------TL 212 (278)
T ss_pred ------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH-H-----------hh
Confidence 12234688999999998754 68999999999999999999999996542221111000 0 00
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 009404 465 LPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP-----TMSEVVQI 506 (535)
Q Consensus 465 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 506 (535)
.... ..+...+..+.+++.+||..+|.+|| ++.++++.
T Consensus 213 ~~~~----~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 213 TMAV----ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred ccCC----CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 0111 12223345688999999999999999 99999864
No 349
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.3e-34 Score=294.60 Aligned_cols=273 Identities=23% Similarity=0.337 Sum_probs=197.7
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeeccc--Ccc
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG--KRA 299 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~--~~~ 299 (535)
.++|...+.||+|+||.||+|+.. +++.||||++..... ......+.+|+.+++.++||||+++++++..... ...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478888999999999999999875 589999999875322 2223457899999999999999999999865321 123
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..++|+||+. .+|.+++. ..+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.++|+|||+++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 4689999996 47776653 35899999999999999999999998 9999999999999999999999999987
Q ss_pred ccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccc-----
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP----- 453 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~----- 453 (535)
..... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.................
T Consensus 166 ~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07879 166 HADAE--------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPE 237 (342)
T ss_pred CCCCC--------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 54321 223457888999998876 4688999999999999999999999965322111000000000
Q ss_pred ---cccC--cccc---cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhhhCCC
Q 009404 454 ---RLQD--SGTV---ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI--LSTIAPD 513 (535)
Q Consensus 454 ---~~~~--~~~~---~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~l~~~ 513 (535)
.... .... ........+...++ ..+..+.+++.+||+.||++||++.|++.+ ++.+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 238 FVQKLEDKAAKSYIKSLPKYPRKDFSTLFP-KASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred HHHHhcccchHHHHhhcCCcccchHHHHhc-CCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 0000 0000 00000000000001 123457899999999999999999999954 7776543
No 350
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=6.9e-35 Score=288.84 Aligned_cols=253 Identities=28% Similarity=0.396 Sum_probs=200.7
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccC-CCCccceeeeeeecccCcce
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLH-HCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~~ 300 (535)
++|...+.||+|+||.||+++.. +++.||+|++.... .......+.+|++++++++ ||||+++++++.. ...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~----~~~ 76 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD----EEN 76 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcC----Cce
Confidence 36788899999999999999976 58999999987532 1223345788999999998 9999999998765 446
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~ 151 (280)
T cd05581 77 LYFVLEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKV 151 (280)
T ss_pred EEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccc
Confidence 79999999999999999764 36999999999999999999999998 99999999999999999999999999987
Q ss_pred cccCCCCCC---------------CCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccc
Q 009404 381 LKADGLPSC---------------SSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEE 445 (535)
Q Consensus 381 ~~~~~~~~~---------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~ 445 (535)
......... ........++..|+|||.+....++.++||||||++++++++|+.||.........
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~ 231 (280)
T cd05581 152 LDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTF 231 (280)
T ss_pred cCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence 654321100 12223456788999999998888999999999999999999999999654321100
Q ss_pred hhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCH----HHHHH
Q 009404 446 SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM----SEVVQ 505 (535)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~----~evl~ 505 (535)
. .+. ......+...+..+.+++.+||+.+|++||++ .++++
T Consensus 232 ~-----------------~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 232 Q-----------------KIL--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred H-----------------HHH--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 0 000 00112233335568999999999999999999 77765
No 351
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.8e-34 Score=290.92 Aligned_cols=253 Identities=26% Similarity=0.359 Sum_probs=195.4
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
.|+..+.||+|+||.||+|+.. +++.+|+|.+.... .......+.+|+++++.++|+|++++++++.. ....+
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~ 91 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR----EHTAW 91 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc----CCeeE
Confidence 3566688999999999999975 47899999986432 22223457889999999999999999999876 34679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||||+. |+|.+++... ...+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++....
T Consensus 92 lv~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 92 LVMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166 (308)
T ss_pred EEEEccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeec
Confidence 9999996 6888877543 245899999999999999999999998 9999999999999999999999999987653
Q ss_pred cCCCCCCCCCCCccccCccccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAM---VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
.. ....++..|+|||.+. ...++.++||||||+++|||++|..||......... ....
T Consensus 167 ~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~~~~-------- 227 (308)
T cd06634 167 PA---------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--YHIA-------- 227 (308)
T ss_pred Cc---------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHH--HHHh--------
Confidence 22 2345788999999874 356788999999999999999999998543211100 0000
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCC
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~ 513 (535)
....+. ..+...+..+.+++.+||+.+|++||++.++++....+...
T Consensus 228 ----~~~~~~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 228 ----QNESPA---LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred ----hcCCCC---cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 000011 01123345588999999999999999999999876655543
No 352
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.7e-34 Score=290.78 Aligned_cols=278 Identities=24% Similarity=0.316 Sum_probs=197.6
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCC-hhHHHHHHHHHHhccCCCCccceeeeeeeccc----C
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPN-ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG----K 297 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~----~ 297 (535)
.++|+..+.||+|+||.||+|++. +++.+|||++....... ....+.+|+++++.++||||+++++++.+... .
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 467888999999999999999975 48999999986543222 22346789999999999999999998765332 2
Q ss_pred cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCC
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGl 377 (535)
....++||||+. ++|.+.+... ...+++..+..++.|+++||+|||+.+ |+|+||||+||++++++.++|+|||+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCcc
Confidence 346799999996 4777777543 246999999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCC------CCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhh
Q 009404 378 AKRLKADGLPSC------SSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW 450 (535)
Q Consensus 378 a~~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~ 450 (535)
+........... ........+++.|+|||.+.+ ..++.++||||||+++|||++|+.||..............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~ 241 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK 241 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 986644321110 111233457888999998765 4578999999999999999999999864332211111000
Q ss_pred ccccccC----cccccccCCCCCCCCCCC-------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 451 ATPRLQD----SGTVISELPDPRLKGDFP-------KEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 451 ~~~~~~~----~~~~~~~~~~~~l~~~~~-------~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
....... ....+....+.......+ ......+.+++.+||+.||++|||+.|++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 0000000 000000000000000001 1122558899999999999999999999863
No 353
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=6.3e-34 Score=287.70 Aligned_cols=245 Identities=28% Similarity=0.413 Sum_probs=190.7
Q ss_pred CCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC--ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP--NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
|...+.||+|+||+||+|+.. +++.|++|++...... .....+.+|+++++.++|||++++++++.+ ....++
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~l 98 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK----EHTAWL 98 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe----CCEEEE
Confidence 555678999999999999875 5889999998754322 222457889999999999999999999876 446799
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
||||+. |+|.+++... ...+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 99 v~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~ 173 (313)
T cd06633 99 VMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP 173 (313)
T ss_pred EEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC
Confidence 999995 6888887643 245899999999999999999999998 99999999999999999999999998864321
Q ss_pred CCCCCCCCCCCccccCccccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAM---VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
.....|+..|+|||++. ...++.++||||||+++|||++|..||.............
T Consensus 174 ---------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~----------- 233 (313)
T cd06633 174 ---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA----------- 233 (313)
T ss_pred ---------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-----------
Confidence 22346888999999874 4568889999999999999999999986432211110000
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.. ..+.. .....+..+.+++.+||+.+|.+||++.+++..
T Consensus 234 --~~-~~~~~---~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 234 --QN-DSPTL---QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred --hc-CCCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 00000 111223458889999999999999999999975
No 354
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.9e-34 Score=292.56 Aligned_cols=273 Identities=21% Similarity=0.281 Sum_probs=195.3
Q ss_pred CCCCCcccceeCceEEEEEEEcC---CcEEEEEEeccCCC-CChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcce
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTD---GRIVAVKRFKTQGG-PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~---g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 300 (535)
+|+..+.||+|+||.||+++... +..||+|++..... ......+.+|+++++++ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 46677899999999999999753 67899999875322 22344578899999999 699999999876543333445
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++++||+. ++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++..
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 788999985 6899988643 56899999999999999999999998 99999999999999999999999999987
Q ss_pred cccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh-----------
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV----------- 448 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~----------- 448 (535)
........ ........||..|+|||.+.+ ..++.++||||||+++|+|++|..||............
T Consensus 155 ~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 155 FSENPGEN-AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred cccccccc-cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 65432211 112234578999999998765 46899999999999999999999998643211000000
Q ss_pred --hhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 449 --LWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 449 --~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.+...................+.. ........+.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFES-IFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHh-hCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000000000000000000 001124568899999999999999999999864
No 355
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.5e-34 Score=281.51 Aligned_cols=248 Identities=20% Similarity=0.232 Sum_probs=189.6
Q ss_pred HHHHHhcCCCCCccc--ceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeec
Q 009404 219 ALEHATDKFSGSNIV--GQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEF 294 (535)
Q Consensus 219 ~l~~~~~~f~~~~~L--G~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~ 294 (535)
+.....++|+..+.+ |+|+||.||++..+ +++.+|+|.+....... .|+.....+ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~e~~~~~~~~~h~~iv~~~~~~~~- 80 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------IEPMVHQLMKDNPNFIKLYYSVTT- 80 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------hhHHHHHHhhcCCCEEEEEEEEec-
Confidence 334445667776776 99999999999864 58889999987542211 122222222 79999999999876
Q ss_pred ccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-cEEEE
Q 009404 295 RGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL-NAKIT 373 (535)
Q Consensus 295 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~-~vkL~ 373 (535)
....++||||+++++|.+++... ..+++..+..++.|+++||.|||+.+ ++||||||+||+++.++ .++|+
T Consensus 81 ---~~~~~iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~ 152 (267)
T PHA03390 81 ---LKGHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLC 152 (267)
T ss_pred ---CCeeEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEe
Confidence 34679999999999999999764 37899999999999999999999998 99999999999999988 99999
Q ss_pred ecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccc
Q 009404 374 DLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453 (535)
Q Consensus 374 DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~ 453 (535)
|||++...... ....++..|+|||++....++.++||||||+++|||++|+.||....... .....+..
T Consensus 153 dfg~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~~~~- 221 (267)
T PHA03390 153 DYGLCKIIGTP---------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLESLLK- 221 (267)
T ss_pred cCccceecCCC---------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHHHHH-
Confidence 99998765422 22357889999999998889999999999999999999999997432211 11111100
Q ss_pred cccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHH
Q 009404 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT-MSEVVQ 505 (535)
Q Consensus 454 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~evl~ 505 (535)
.... ....+...+..+.+++.+||+.+|.+||+ ++|+++
T Consensus 222 -----------~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 222 -----------RQQK--KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred -----------hhcc--cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 0000 01122244566899999999999999996 698885
No 356
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-34 Score=311.29 Aligned_cols=273 Identities=17% Similarity=0.205 Sum_probs=185.4
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEcC--CcEEEEEEec--------------c--CCCCChhHHHHHHHHHHhccCCCC
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLTD--GRIVAVKRFK--------------T--QGGPNADSVFLTEVDMLSRLHHCH 283 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~~--g~~vaVK~l~--------------~--~~~~~~~~~~~~Ei~~l~~l~H~n 283 (535)
...++|.+.+.||+|+||+||++.++. +...++|.+. . .........+.+|+++|+.++|||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 345789999999999999999987542 2222222110 0 011122345789999999999999
Q ss_pred ccceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcc---cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 009404 284 VVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVL---VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSS 360 (535)
Q Consensus 284 iv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~ 360 (535)
|+++++++.+ ....++|++++ .++|.+++.... ...........|+.|++.||+|||+++ |+||||||+
T Consensus 225 Iv~l~~~~~~----~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~ 296 (501)
T PHA03210 225 ILKIEEILRS----EANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLE 296 (501)
T ss_pred cCcEeEEEEE----CCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHH
Confidence 9999999876 34569999998 467888774321 122345667889999999999999998 999999999
Q ss_pred CEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCcc
Q 009404 361 NILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSI 440 (535)
Q Consensus 361 NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~ 440 (535)
|||++.++.+||+|||++..+..... .......||..|+|||.+.+..++.++|||||||++|||++|..++....
T Consensus 297 NILl~~~~~vkL~DFGla~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~ 372 (501)
T PHA03210 297 NIFLNCDGKIVLGDFGTAMPFEKERE----AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDG 372 (501)
T ss_pred HEEECCCCCEEEEeCCCceecCcccc----cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCC
Confidence 99999999999999999987654321 11233578999999999999999999999999999999999876443221
Q ss_pred ccc-cchhhhhcc------ccccCcc-cccccCCCCCC---CCCCCH-----HHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 009404 441 TKG-EESLVLWAT------PRLQDSG-TVISELPDPRL---KGDFPK-----EEMQIMAYLAKECLQLDPDARPTMSEVV 504 (535)
Q Consensus 441 ~~~-~~~~~~~~~------~~~~~~~-~~~~~~~~~~l---~~~~~~-----~~~~~l~~li~~cl~~dP~~RPt~~evl 504 (535)
... ...+..... ..+.+.. .....+....+ ....+. .....+.+++.+||+.||.+|||+.|++
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL 452 (501)
T PHA03210 373 GGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELL 452 (501)
T ss_pred CCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHh
Confidence 111 111000000 0000000 00000000000 000000 1123467789999999999999999999
Q ss_pred HH
Q 009404 505 QI 506 (535)
Q Consensus 505 ~~ 506 (535)
++
T Consensus 453 ~h 454 (501)
T PHA03210 453 AL 454 (501)
T ss_pred hC
Confidence 75
No 357
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.6e-34 Score=292.49 Aligned_cols=279 Identities=23% Similarity=0.300 Sum_probs=204.1
Q ss_pred CCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecc-cCcceEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFR-GKRAMRL 302 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~~~~ 302 (535)
+|...+.||.|+||.||+|+..+ ++.||||++..... ....+.+.+|+++++.++|+||+++++++.... ......+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 47778899999999999999764 89999999976432 333456889999999999999999999987643 2223679
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
++|||++ ++|.+++... ..+++..+..++.|++.||+|||+.+ |+|+||||.|||+++++.++|+|||++....
T Consensus 81 lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999997 5899988653 36899999999999999999999998 9999999999999999999999999998765
Q ss_pred cCCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhh-cc-cc-----
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW-AT-PR----- 454 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~-~~-~~----- 454 (535)
..... ........++..|+|||.+.+. .++.++|+||||+++|+|++|+.||.............. .. +.
T Consensus 155 ~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 155 PDEDE--KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ccccc--cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 43210 0112334578899999999877 789999999999999999999999965432111000000 00 00
Q ss_pred ---ccCcccccccCCCCC--CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhhhCC
Q 009404 455 ---LQDSGTVISELPDPR--LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI--LSTIAP 512 (535)
Q Consensus 455 ---~~~~~~~~~~~~~~~--l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~l~~ 512 (535)
.......+....... -........+..+.+++.+||+.+|++|||+.+++.. ++.+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 000000000000000 0000111234568899999999999999999999985 655544
No 358
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.7e-34 Score=282.01 Aligned_cols=250 Identities=25% Similarity=0.332 Sum_probs=192.1
Q ss_pred CCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCC----CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcce
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQG----GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~ 300 (535)
+|.+.+.||+|+||.||++++.. +..+++|.++... .......+..|+.+++.++||||+++++++.+ ...
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~ 76 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE----RDA 76 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc----CCc
Confidence 46778899999999999998754 4456666655321 12233346788999999999999999998865 345
Q ss_pred EEEEEecCCCCCHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCc
Q 009404 301 RLLVFEFMPNGNLRDCLDGV--LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMA 378 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla 378 (535)
.++||||+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++ +.++|+|||++
T Consensus 77 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~ 152 (260)
T cd08222 77 FCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVS 152 (260)
T ss_pred eEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCce
Confidence 69999999999999998642 2345899999999999999999999998 999999999999986 46999999998
Q ss_pred cccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCc
Q 009404 379 KRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDS 458 (535)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 458 (535)
....... .......|+..|+|||.+....++.++|+||||+++|+|++|..||...... .....
T Consensus 153 ~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~---~~~~~-------- 216 (260)
T cd08222 153 RLLMGSC-----DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL---SVVLR-------- 216 (260)
T ss_pred eecCCCc-----ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH---HHHHH--------
Confidence 7664321 1223345788999999998888899999999999999999999998532211 00000
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
......+ ..+...+..+.+++.+||+.+|++||++.|+++.
T Consensus 217 ---~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 217 ---IVEGPTP----SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred ---HHcCCCC----CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 0000111 2234445668999999999999999999999874
No 359
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=4.6e-34 Score=283.53 Aligned_cols=266 Identities=22% Similarity=0.299 Sum_probs=197.5
Q ss_pred CCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
|+..+.||.|++|.||++... +++.+++|++...... .....+.+|+++++.++|+||+++++++.. ....++|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~v 76 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH----KGDLYLV 76 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc----CCCEEEE
Confidence 456678999999999999875 5899999998765432 234558889999999999999999998876 3567999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||+++ +|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||++++++.++|+|||.+......
T Consensus 77 ~e~~~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~ 151 (283)
T cd05118 77 FEFMDT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSP 151 (283)
T ss_pred EeccCC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCC
Confidence 999975 8988887643 46899999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhc-cccccCccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA-TPRLQDSGTVI 462 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 462 (535)
. .......++..|+|||.+... .++.++|+||||+++|+|++|+.||............... ...........
T Consensus 152 ~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (283)
T cd05118 152 V-----RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKF 226 (283)
T ss_pred c-----ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccc
Confidence 2 112234577889999998776 7899999999999999999999998643321110000000 00000000000
Q ss_pred cc--------CCCCCC--CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 463 SE--------LPDPRL--KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 463 ~~--------~~~~~l--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.. ...... ........+..+.+++.+||+.||.+||++.+++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 227 TSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00 000000 001122345678999999999999999999999863
No 360
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4.3e-34 Score=283.63 Aligned_cols=265 Identities=26% Similarity=0.367 Sum_probs=195.9
Q ss_pred CCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
|+..+.||+|++|.||+|+..+ ++.+|+|.+.... .......+..|+++++.++|+|++++++++.+ ....++|
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----~~~~~~v 76 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT----ERKLYLV 76 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc----CCceEEE
Confidence 4556789999999999999764 8999999998653 22233457889999999999999999999876 3467999
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
|||++ ++|.+++.... ..+++..+..++.|++.||+|||+.+ |+|+||+|+||++++++.++|+|||++......
T Consensus 77 ~e~~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~ 151 (282)
T cd07829 77 FEYCD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIP 151 (282)
T ss_pred ecCcC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCC
Confidence 99997 59999997643 45899999999999999999999998 999999999999999999999999998776433
Q ss_pred CCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh----------hhccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV----------LWATP 453 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~----------~~~~~ 453 (535)
.. ......++..|+|||.+... .++.++||||||+++|||++|+.||............ .|...
T Consensus 152 ~~-----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07829 152 LR-----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGV 226 (282)
T ss_pred cc-----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhh
Confidence 21 12223456789999998766 7899999999999999999999998653321110000 00000
Q ss_pred -cccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 454 -RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 454 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.....................+ .....+.+++.+||+.||++||++.+++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 227 TKLPDYKPTFPKFPPKDLEKVLP-RLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccccccccCccchHHhcc-cccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0000000000000000001111 124568999999999999999999999864
No 361
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.9e-34 Score=295.27 Aligned_cols=272 Identities=20% Similarity=0.299 Sum_probs=194.3
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccC------
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGK------ 297 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~------ 297 (535)
.+|...+.||.|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++......
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 67888899999999999999875 488999999876543 3345588999999999999999999876643221
Q ss_pred ----cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC-CCCcEEE
Q 009404 298 ----RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD-ENLNAKI 372 (535)
Q Consensus 298 ----~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~-~~~~vkL 372 (535)
....++||||++ ++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++ +++.++|
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEE
Confidence 125689999996 589888854 45899999999999999999999998 99999999999997 5567899
Q ss_pred EecCCccccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhc
Q 009404 373 TDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWA 451 (535)
Q Consensus 373 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~ 451 (535)
+|||++......... ........++..|+|||.+.. ..++.++||||||+++|||++|+.||...............
T Consensus 157 ~dfg~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 157 GDFGLARIVDPHYSH--KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred CCcccceecCCcccc--ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 999999765432111 111223357889999997654 56788999999999999999999999644322111111100
Q ss_pred cccccC--cccccccCCC----CCCCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 452 TPRLQD--SGTVISELPD----PRLKG-----DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 452 ~~~~~~--~~~~~~~~~~----~~l~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.+.... .......+.. ..... .........+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 000000 0000000000 00000 0011233558899999999999999999999953
No 362
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=7.4e-34 Score=289.13 Aligned_cols=268 Identities=23% Similarity=0.298 Sum_probs=196.8
Q ss_pred HHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCc
Q 009404 221 EHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKR 298 (535)
Q Consensus 221 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 298 (535)
...+++|+..+.||.|+||.||++... +++.||||++.... .......+..|+++++.++||||+++.+++... .
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---~ 82 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP---L 82 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC---C
Confidence 446788999999999999999999865 68999999886432 223345578899999999999999999988642 2
Q ss_pred ceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCc
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMA 378 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla 378 (535)
...++++||+ +++|.+++.. ..+++.....++.|+++||+|||+.+ |+|+||+|+|||+++++.++|+|||++
T Consensus 83 ~~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 83 EDIYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred CcEEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccc
Confidence 3568999999 5689888864 45788889999999999999999998 999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchh-hhhcccccc
Q 009404 379 KRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESL-VLWATPRLQ 456 (535)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~-~~~~~~~~~ 456 (535)
...... .....++..|+|||.+.. ..++.++||||||+++|+|++|+.||........... .........
T Consensus 156 ~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 227 (328)
T cd07856 156 RIQDPQ--------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPD 227 (328)
T ss_pred cccCCC--------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 754321 123456788999998765 5689999999999999999999999854322110000 000000000
Q ss_pred C------cccccccCCCCCCCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 457 D------SGTVISELPDPRLKGDFP-----KEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 457 ~------~~~~~~~~~~~~l~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+ .................+ ...+..+.+++.+||+.+|++|||+.+++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 228 DVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 000000000000000111 1234568999999999999999999999876
No 363
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.1e-33 Score=289.82 Aligned_cols=274 Identities=23% Similarity=0.314 Sum_probs=200.2
Q ss_pred HHHHHHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeec
Q 009404 217 YSALEHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEF 294 (535)
Q Consensus 217 ~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~ 294 (535)
..++..++++|+..+.||+|+||.||+|... +++.||+|++.... .......+.+|++++++++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 3456778899999999999999999999864 58999999997532 122234578899999999999999999988643
Q ss_pred cc--CcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEE
Q 009404 295 RG--KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKI 372 (535)
Q Consensus 295 ~~--~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL 372 (535)
.. .....+++++++ +++|.+++.. ..+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl 161 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKI 161 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEEE
Confidence 21 123467888887 7899988764 45899999999999999999999998 999999999999999999999
Q ss_pred EecCCccccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh-hh
Q 009404 373 TDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV-LW 450 (535)
Q Consensus 373 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~-~~ 450 (535)
+|||++...... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||............ ..
T Consensus 162 ~dfg~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 233 (345)
T cd07877 162 LDFGLARHTDDE--------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 233 (345)
T ss_pred eccccccccccc--------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 999998764321 223467889999998765 56889999999999999999999998543211100000 00
Q ss_pred ccc-------cccCc--ccc---cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 451 ATP-------RLQDS--GTV---ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 451 ~~~-------~~~~~--~~~---~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
... .+... ... +.......+. ......+..+.+++.+||+.||.+||++.+++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 234 VGTPGAELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred hCCCCHHHHhhcccHhHHHHHHHhcccCCcchh-hhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000 00000 000 0000000000 0001123458899999999999999999999975
No 364
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=9.8e-34 Score=289.01 Aligned_cols=273 Identities=22% Similarity=0.282 Sum_probs=194.2
Q ss_pred cCCCC-CcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCC-------------hhHHHHHHHHHHhccCCCCccceee
Q 009404 225 DKFSG-SNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPN-------------ADSVFLTEVDMLSRLHHCHVVPLVG 289 (535)
Q Consensus 225 ~~f~~-~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~-------------~~~~~~~Ei~~l~~l~H~niv~l~g 289 (535)
++|.. .+.||.|+||+||+|... +++.||||.+....... ....+.+|+++++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 34443 467999999999999875 58999999987543221 0123678999999999999999999
Q ss_pred eeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc
Q 009404 290 YCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLN 369 (535)
Q Consensus 290 ~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~ 369 (535)
++.. ....++||||++ |+|.+++... ..+++.....++.|++.||+|||+.+ ++|+||+|+||+++.++.
T Consensus 88 ~~~~----~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~ 157 (335)
T PTZ00024 88 VYVE----GDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGI 157 (335)
T ss_pred EEec----CCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCC
Confidence 9875 446799999996 6999998653 45899999999999999999999998 999999999999999999
Q ss_pred EEEEecCCccccccCCCC---------CCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCc
Q 009404 370 AKITDLGMAKRLKADGLP---------SCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRS 439 (535)
Q Consensus 370 vkL~DFGla~~~~~~~~~---------~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~ 439 (535)
++|+|||++......... ..........++..|+|||.+.+. .++.++||||||+++|||++|..||...
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237 (335)
T ss_pred EEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999876522110 001111223467889999988764 4689999999999999999999999654
Q ss_pred cccccchhh-hhcccccc----Ccc-----cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 440 ITKGEESLV-LWATPRLQ----DSG-----TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 440 ~~~~~~~~~-~~~~~~~~----~~~-----~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
......... ........ ... ........+... ......+..+.+++.+||+.+|++|||++|++..-.
T Consensus 238 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~ 315 (335)
T PTZ00024 238 NEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEY 315 (335)
T ss_pred CHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcc
Confidence 322111000 00000000 000 000000000000 001122455889999999999999999999997543
No 365
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=9.6e-34 Score=290.10 Aligned_cols=277 Identities=22% Similarity=0.296 Sum_probs=201.2
Q ss_pred HHHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccC
Q 009404 220 LEHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGK 297 (535)
Q Consensus 220 l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 297 (535)
+....++|+..+.||+|+||.||++... +++.||||++..... ......+.+|+++++.++||||+++++++......
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 4446788999999999999999999864 589999999864322 22234578999999999999999999988653221
Q ss_pred --cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEec
Q 009404 298 --RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDL 375 (535)
Q Consensus 298 --~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DF 375 (535)
....++||||+ +++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+||
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeec
Confidence 12458999999 7799988764 45899999999999999999999998 999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccc
Q 009404 376 GMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPR 454 (535)
Q Consensus 376 Gla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~ 454 (535)
|++...... .....++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||..................
T Consensus 163 g~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 234 (343)
T cd07880 163 GLARQTDSE--------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGT 234 (343)
T ss_pred ccccccccC--------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 998765322 223456889999998875 45889999999999999999999999643221110000000000
Q ss_pred --------cc--CcccccccC---CCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHhhhCC
Q 009404 455 --------LQ--DSGTVISEL---PDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ--ILSTIAP 512 (535)
Q Consensus 455 --------~~--~~~~~~~~~---~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~l~~ 512 (535)
+. ........+ ....+ ..........+.+++.+|++.||++|||+.++++ .++....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 235 PSKEFVQKLQSEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred CCHHHHHhhcchhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 00 000000000 00000 0011223445889999999999999999999994 4555433
No 366
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=323.67 Aligned_cols=260 Identities=28% Similarity=0.376 Sum_probs=208.2
Q ss_pred HHHHhcCCCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCCC-CChhHHHHHHHHHHhccCCCCccceeeeeeecccC
Q 009404 220 LEHATDKFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGK 297 (535)
Q Consensus 220 l~~~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 297 (535)
+...+-++....+||.|.||.||-|.. .+|+..|+|-++.... ....+...+|+.++..|+|||+|+++|+=..
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH---- 1305 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH---- 1305 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec----
Confidence 556677888899999999999999985 4599999998875432 3334557899999999999999999998665
Q ss_pred cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCC
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGl 377 (535)
+...+|-||||++|+|.+.++.. ...++.....+..|++.|++|||+.| |+||||||.||||+.+|.+|++|||.
T Consensus 1306 Rekv~IFMEyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGs 1380 (1509)
T KOG4645|consen 1306 REKVYIFMEYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGS 1380 (1509)
T ss_pred HHHHHHHHHHhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccc
Confidence 45668999999999999999753 33667777888999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCccccCccccCccccccCC---CCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccc
Q 009404 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGR---ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPR 454 (535)
Q Consensus 378 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~ 454 (535)
|..+.... .......+...||+-|||||++.+.. -..+.||||+||+++||.||+.||......- .+...+
T Consensus 1381 a~ki~~~~-~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~--aIMy~V--- 1454 (1509)
T KOG4645|consen 1381 AVKIKNNA-QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW--AIMYHV--- 1454 (1509)
T ss_pred eeEecCch-hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh--HHHhHH---
Confidence 98876542 12223455678999999999997543 4678999999999999999999997544321 111111
Q ss_pred ccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 455 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.....+.+|...+..-.+++..||..||.+|.++.|+++.
T Consensus 1455 ------------~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1455 ------------AAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred ------------hccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 1111234566677888999999999999999999988874
No 367
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.3e-33 Score=274.98 Aligned_cols=237 Identities=30% Similarity=0.374 Sum_probs=190.0
Q ss_pred cceeCceEEEEEEEc-CCcEEEEEEeccCCCCC--hhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCC
Q 009404 233 VGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPN--ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMP 309 (535)
Q Consensus 233 LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~ 309 (535)
||.|+||.||++... +++.+|+|.+....... ....+..|+++++.++|+||+++++.+.. ....++||||++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~~v~e~~~ 76 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT----EEKLYLVLEYAP 76 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec----CCeeEEEEecCC
Confidence 689999999999976 48999999987653322 33458899999999999999999988765 457799999999
Q ss_pred CCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCC
Q 009404 310 NGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSC 389 (535)
Q Consensus 310 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 389 (535)
+++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 77 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---- 147 (250)
T cd05123 77 GGELFSHLSKE--GRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG---- 147 (250)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC----
Confidence 99999999764 35899999999999999999999988 9999999999999999999999999997764431
Q ss_pred CCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCC
Q 009404 390 SSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469 (535)
Q Consensus 390 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (535)
.......++..|+|||.......+.++|+||||+++|+|++|..||...... .... .+...
T Consensus 148 -~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---~~~~--------------~~~~~- 208 (250)
T cd05123 148 -SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK---EIYE--------------KILKD- 208 (250)
T ss_pred -CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHH--------------HHhcC-
Confidence 1123446788999999998888999999999999999999999999543221 1000 00000
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 009404 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSE 502 (535)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 502 (535)
....+...+..+.+++.+||..||++||++.+
T Consensus 209 -~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 209 -PLRFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred -CCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 11222333456889999999999999999943
No 368
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=270.56 Aligned_cols=258 Identities=22% Similarity=0.228 Sum_probs=205.0
Q ss_pred HhcCCCCC-cccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhc-cCCCCccceeeeeeecccCcc
Q 009404 223 ATDKFSGS-NIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSR-LHHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 223 ~~~~f~~~-~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~-l~H~niv~l~g~~~~~~~~~~ 299 (535)
.+++|++. ++||-|-.|.|-....+ .|+.+|+|++.+.. . ..+|+++=-. -.|||||.+++++...-....
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~--K----ARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP--K----ARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH--H----HHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 45566654 67999999999999875 48899999997542 2 4577775333 379999999999988777778
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC---CCCcEEEEecC
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD---ENLNAKITDLG 376 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~---~~~~vkL~DFG 376 (535)
.+++|||.|+||.|+..++....+.+++.++..|..||+.|+.|||+.+ |.||||||+|+|.+ .|-.+||+|||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccc
Confidence 8899999999999999999887788999999999999999999999998 99999999999996 45569999999
Q ss_pred CccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccccc
Q 009404 377 MAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 377 la~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
+|+.-... ......+-|+.|.|||++-..+|....|+||+||++|-|+.|.+||.......-. .
T Consensus 210 FAK~t~~~------~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ais----------p 273 (400)
T KOG0604|consen 210 FAKETQEP------GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------P 273 (400)
T ss_pred cccccCCC------ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCC----------h
Confidence 99875532 2234456789999999999999999999999999999999999999754321000 0
Q ss_pred CcccccccCC--CCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 457 DSGTVISELP--DPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 457 ~~~~~~~~~~--~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.. ..++. ...+..+.....++...++++.+|+.+|.+|.|+.|++.+-+
T Consensus 274 gM---k~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpw 324 (400)
T KOG0604|consen 274 GM---KRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPW 324 (400)
T ss_pred hH---HhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCch
Confidence 00 01111 112222333566778899999999999999999999998644
No 369
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=7.3e-34 Score=291.01 Aligned_cols=268 Identities=24% Similarity=0.334 Sum_probs=196.6
Q ss_pred HhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeeccc--Cc
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRG--KR 298 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~--~~ 298 (535)
..++|+..+.||+|+||.||+|+.. +++.||||++.... .......+.+|+.+++.++|||++++++++..... ..
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4677888999999999999999986 48899999987532 12233457789999999999999999987754321 12
Q ss_pred ceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCc
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMA 378 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla 378 (535)
...++|+||+ +++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||+|+||++++++.++|+|||++
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccccc
Confidence 3479999999 6799998865 46899999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccc---
Q 009404 379 KRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPR--- 454 (535)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~--- 454 (535)
...... .....++..|+|||.+.. ..++.++||||||+++|||++|+.||..................
T Consensus 166 ~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 237 (343)
T cd07851 166 RHTDDE--------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDE 237 (343)
T ss_pred cccccc--------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Confidence 765432 223457888999998865 46789999999999999999999999643322111000000000
Q ss_pred -----ccC--cccc---cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 455 -----LQD--SGTV---ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 455 -----~~~--~~~~---~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
... .... +.....+.+... ....+..+.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 238 ELLQKISSESARNYIQSLPQMPKKDFKEV-FSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHhhccchhHHHHHHhccccCCCCHHHH-hccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000 0000 000000000000 01124568999999999999999999999874
No 370
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.9e-34 Score=270.37 Aligned_cols=274 Identities=23% Similarity=0.289 Sum_probs=198.5
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-----CcEEEEEEeccCCCCC-hhHHHHHHHHHHhccCCCCccceeeeeeecccCc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-----GRIVAVKRFKTQGGPN-ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKR 298 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-----g~~vaVK~l~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 298 (535)
..|+....||+|.+|.||+|.-.+ ...+|+|+++...... .....-+|+.+++.++|||++.+..++... +
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~---d 100 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH---D 100 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc---C
Confidence 458888999999999999996432 2379999998664332 234467999999999999999999998864 4
Q ss_pred ceEEEEEecCCCCCHHHhhhhc---ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC----CcEE
Q 009404 299 AMRLLVFEFMPNGNLRDCLDGV---LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN----LNAK 371 (535)
Q Consensus 299 ~~~~lV~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~----~~vk 371 (535)
...++++||.+. +|...++-. ..+.++.....+|+.||+.|+.|||++. |+||||||.||||..+ |.||
T Consensus 101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VK 176 (438)
T KOG0666|consen 101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVK 176 (438)
T ss_pred ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeE
Confidence 467999999965 898888532 2245899999999999999999999999 9999999999999877 8999
Q ss_pred EEecCCccccccCCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhh-
Q 009404 372 ITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL- 449 (535)
Q Consensus 372 L~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~- 449 (535)
|+|||+++.+...-.+- ......+.|.+|.|||.+.+. .|+.+.|||+.|||+.||+|-++.|.....+.......
T Consensus 177 IaDlGlaR~~~~plkpl--~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq 254 (438)
T KOG0666|consen 177 IADLGLARLFNNPLKPL--ASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQ 254 (438)
T ss_pred eecccHHHHhhcccccc--ccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCch
Confidence 99999999886543221 233456789999999998865 58999999999999999999877776543222111000
Q ss_pred ---------hccccccCcccccccCCCC-CCCCCCC----HH------------HHHHHHHHHHHhcccCCCCCCCHHHH
Q 009404 450 ---------WATPRLQDSGTVISELPDP-RLKGDFP----KE------------EMQIMAYLAKECLQLDPDARPTMSEV 503 (535)
Q Consensus 450 ---------~~~~~~~~~~~~~~~~~~~-~l~~~~~----~~------------~~~~l~~li~~cl~~dP~~RPt~~ev 503 (535)
.....-.+.+..+..+++- .+...++ .. -.+...+|+.++|..||-+|.|++|.
T Consensus 255 ~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qA 334 (438)
T KOG0666|consen 255 HDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQA 334 (438)
T ss_pred HHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHH
Confidence 0000000111111111111 0000000 00 01236789999999999999999999
Q ss_pred HHHH
Q 009404 504 VQIL 507 (535)
Q Consensus 504 l~~L 507 (535)
++..
T Consensus 335 leh~ 338 (438)
T KOG0666|consen 335 LEHP 338 (438)
T ss_pred hccc
Confidence 9854
No 371
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-34 Score=270.99 Aligned_cols=241 Identities=25% Similarity=0.284 Sum_probs=197.6
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCC--hhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPN--ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|..+++||+|.||.|.+.+.+ .++.+|+|+++....-. +...-+.|-++|+..+||.+..+.-.+.. ...+
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt----~drl 243 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT----QDRL 243 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc----CceE
Confidence 56777899999999999999875 48999999998764222 22235789999999999999887654443 5578
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
++||||..||.|.-+|.+. +.+++.....+-..|+.||.|||+++ |++||||.+|.|+|.+|++||+|||+++.-
T Consensus 244 CFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred EEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhc
Confidence 9999999999999998763 56899999999999999999999998 999999999999999999999999999865
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
... +.....+.||+.|+|||++....|....|.|.+||++|||+.|+.||.......-..++.
T Consensus 319 I~~-----g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl------------ 381 (516)
T KOG0690|consen 319 IKY-----GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELIL------------ 381 (516)
T ss_pred ccc-----cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHH------------
Confidence 543 345678999999999999999999999999999999999999999997654432211111
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP 498 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP 498 (535)
-.. ..+|...++....|+...|..||.+|.
T Consensus 382 -----~ed--~kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 382 -----MED--LKFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred -----hhh--ccCCccCCHHHHHHHHHHhhcChHhhc
Confidence 111 134555566678899999999999995
No 372
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-33 Score=293.21 Aligned_cols=265 Identities=26% Similarity=0.391 Sum_probs=217.8
Q ss_pred CHHHHHHHhcCCCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeee
Q 009404 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSE 293 (535)
Q Consensus 216 ~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~ 293 (535)
.++.+-..++-|++.+.||.|.+|.||+++. ++++.+|||++....+.+ ++...|.++++.+ +|||++.++|++..
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d--eEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE--EEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc--HHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 3444555667788889999999999999985 458999999998765433 4467889999988 79999999999864
Q ss_pred c-ccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEE
Q 009404 294 F-RGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKI 372 (535)
Q Consensus 294 ~-~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL 372 (535)
. .+.+.++|||||||.+||..|.+++..+..+.|..+..|++.++.|+.+||... ++|||||-.|||++.++.|||
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEE
Confidence 2 345678999999999999999998887788999999999999999999999987 999999999999999999999
Q ss_pred EecCCccccccCCCCCCCCCCCccccCccccCcccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchh
Q 009404 373 TDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV-----GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESL 447 (535)
Q Consensus 373 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~ 447 (535)
.|||++..+... -.......||+.|||||++.. ..|+.++|+||||++..||--|.+|+...-+.
T Consensus 165 vDFGvSaQldsT-----~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm----- 234 (953)
T KOG0587|consen 165 VDFGVSAQLDST-----VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM----- 234 (953)
T ss_pred eeeeeeeeeecc-----cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh-----
Confidence 999999877643 234556789999999999863 34788999999999999999999998543321
Q ss_pred hhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 448 VLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
...+.....|.....-|+.-.+.+.++|..||.+|..+||++.+++++
T Consensus 235 -----------raLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 235 -----------RALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred -----------hhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 011112223333344577788889999999999999999999999864
No 373
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=7.8e-33 Score=268.29 Aligned_cols=219 Identities=20% Similarity=0.203 Sum_probs=173.9
Q ss_pred eCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCCCCCHH
Q 009404 236 GGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLR 314 (535)
Q Consensus 236 G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~ 314 (535)
|.+|.||+++.. +++.+|+|++.... .+.+|...+....||||+++++++.+ ....++||||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVS----EDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheec----CCeEEEEEecCCCCCHH
Confidence 899999999875 58899999997542 13445555556679999999998875 44679999999999999
Q ss_pred HhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCC
Q 009404 315 DCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPA 394 (535)
Q Consensus 315 ~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 394 (535)
+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++++|||.+...... ..
T Consensus 74 ~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~--------~~ 140 (237)
T cd05576 74 SHISKF--LNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS--------CD 140 (237)
T ss_pred HHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc--------cc
Confidence 998654 45899999999999999999999998 999999999999999999999999987655432 11
Q ss_pred ccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCCCCCCC
Q 009404 395 RMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDF 474 (535)
Q Consensus 395 ~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 474 (535)
...++..|+|||.+....++.++||||+|+++|||++|..|+....... ..... ...
T Consensus 141 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------------------~~~~~----~~~ 197 (237)
T cd05576 141 GEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------------------NTHTT----LNI 197 (237)
T ss_pred cCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------------------ccccc----cCC
Confidence 2345677999999988889999999999999999999998874321100 00000 012
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCH
Q 009404 475 PKEEMQIMAYLAKECLQLDPDARPTM 500 (535)
Q Consensus 475 ~~~~~~~l~~li~~cl~~dP~~RPt~ 500 (535)
|...+..+.+++.+||+.||++||++
T Consensus 198 ~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 198 PEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred cccCCHHHHHHHHHHccCCHHHhcCC
Confidence 22334558899999999999999997
No 374
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=3.9e-32 Score=300.23 Aligned_cols=146 Identities=26% Similarity=0.351 Sum_probs=127.8
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC--ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP--NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
++|.+.+.||+|+||.||+|.+. +++.||||+++..... .....+.+|+.++..++||||+++++++.. ....
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~----~~~~ 79 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS----ANNV 79 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE----CCEE
Confidence 56888899999999999999986 5899999999754322 223458889999999999999999988765 4467
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
++||||+++++|.+++... ..+++..++.|+.||+.||.|||..+ |+||||||+||||+.++.+||+|||+++
T Consensus 80 ~lVmEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 80 YLVMEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999999999754 45889999999999999999999998 9999999999999999999999999986
No 375
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-33 Score=242.71 Aligned_cols=267 Identities=22% Similarity=0.339 Sum_probs=202.0
Q ss_pred CCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCC-hhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPN-ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+|...++||+|.+|+||+|+..+ ++.||+|+++-+...+ .....++|+-+++.++|.|||+++++... +..+-+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhs----dkkltl 78 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS----DKKLTL 78 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhcc----CceeEE
Confidence 34556789999999999998654 8999999998554333 33457899999999999999999998765 557789
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
|+||+ ..+|..|.+... ..++......++.|+++||.|.|+++ +.||||||.|.|++.+|+.|++|||+++.+.-
T Consensus 79 vfe~c-dqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgi 153 (292)
T KOG0662|consen 79 VFEFC-DQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGI 153 (292)
T ss_pred eHHHh-hHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCC
Confidence 99999 558999987643 45899999999999999999999998 99999999999999999999999999997754
Q ss_pred CCCCCCCCCCCccccCccccCccccccCC-CCccchHHHHHHHHHHHHhCCCC-CCCccccccchhhhhcc-ccccCccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVGR-ASLMSDVFSFGVVLLELITGRQP-IHRSITKGEESLVLWAT-PRLQDSGT 460 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSlGvil~eLltG~~P-~~~~~~~~~~~~~~~~~-~~~~~~~~ 460 (535)
. .......+.|.+|.+|.++.+.+ |+...|+||-|||+.||.....| |.............|.. ..-++.+.
T Consensus 154 p-----vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wp 228 (292)
T KOG0662|consen 154 P-----VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWP 228 (292)
T ss_pred c-----eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCC
Confidence 3 22334456789999999998755 78899999999999999985544 44333322222222222 22233344
Q ss_pred ccccCCCCCCCCCCCHH---------HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 461 VISELPDPRLKGDFPKE---------EMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~---------~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.+.+++|...-..+|.. ....=.+++.+.+.-+|.+|.++++.++.
T Consensus 229 s~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 229 SMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred ccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 45555554443333321 11224578888899999999999988763
No 376
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-34 Score=275.31 Aligned_cols=264 Identities=24% Similarity=0.344 Sum_probs=205.7
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChh--HHHHHHHHHHhcc-CCCCccceeeeeeecccCcce
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNAD--SVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~--~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 300 (535)
.+|..+.+||+|+||.|.+|.-+. .+.+|||+++.+..-+.+ +--..|-++|..- +-|.++++..++.. -..
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT----mDR 424 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT----MDR 424 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh----hhh
Confidence 467778899999999999998654 678999999876422221 1234677777766 67788898887765 346
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
+|+||||+.+|+|--.+++. ..+.+..++.+|..||-||-+||+++ |++||||.+|||||.+|++||+|||+++.
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE 499 (683)
T ss_pred eeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecccccc
Confidence 79999999999999888765 55889999999999999999999999 99999999999999999999999999986
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGT 460 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (535)
-..++ .....+.||+.|+|||.+...+|+..+|.|||||+||||+.|++||+.....+ +
T Consensus 500 ni~~~-----~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e---l------------- 558 (683)
T KOG0696|consen 500 NIFDG-----VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---L------------- 558 (683)
T ss_pred cccCC-----cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH---H-------------
Confidence 54442 34567899999999999999999999999999999999999999997643321 1
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcccccCCCCCccCcccccc
Q 009404 461 VISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRNISLNLFQPVAWRR 532 (535)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~~~~~~~~~~~~~~~~~~ 532 (535)
.+.+.+. .-.+|+..+.+..++.+..|...|.+|.... ++.+ +.-...+++-.|+|++
T Consensus 559 -F~aI~eh--nvsyPKslSkEAv~ickg~ltK~P~kRLGcg----------~~ge-~di~~H~FFR~iDWek 616 (683)
T KOG0696|consen 559 -FQAIMEH--NVSYPKSLSKEAVAICKGLLTKHPGKRLGCG----------PEGE-RDIREHPFFRRIDWEK 616 (683)
T ss_pred -HHHHHHc--cCcCcccccHHHHHHHHHHhhcCCccccCCC----------Cccc-cchhhCcchhhccHHH
Confidence 1111111 1246777777788899999999999996432 1111 2233456666777764
No 377
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=266.70 Aligned_cols=251 Identities=25% Similarity=0.309 Sum_probs=191.5
Q ss_pred CcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHH-hccCCCCccceeeeeeecccCcceEEEEEec
Q 009404 230 SNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDML-SRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l-~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
+..||.|+||+|+|-.++ .|+..|||+++......+..+++.|.+.. +.-+.||||+++|.+-. +...|+.||.
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~----EGdcWiCMEL 144 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS----EGDCWICMEL 144 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc----CCceeeeHHH
Confidence 567999999999999876 49999999999877666667788898864 44589999999998765 3456999999
Q ss_pred CCCCCHHHhhh---hcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC
Q 009404 308 MPNGNLRDCLD---GVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 308 ~~~gsL~~~l~---~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~ 384 (535)
| ..||..+.. ......+++..+-.|......||.||.+.- +|+|||+||+||||+..|.+||+|||.+-.+...
T Consensus 145 M-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 145 M-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS 221 (361)
T ss_pred H-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH
Confidence 9 457766542 233355899999999999999999998765 5999999999999999999999999998766432
Q ss_pred CCCCCCCCCCccccCccccCcccccc--CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMV--GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVI 462 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (535)
-..+.-.|-..|||||.+.. ..|..+|||||||++|||+.||..|+.......++- ...+
T Consensus 222 ------iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql-~~Vv----------- 283 (361)
T KOG1006|consen 222 ------IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQL-CQVV----------- 283 (361)
T ss_pred ------HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHH-HHHH-----------
Confidence 12334467788999999864 348999999999999999999999996543321110 0000
Q ss_pred ccCCCCCCCCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 463 SELPDPRLKGD-FPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 463 ~~~~~~~l~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.--.|.+... -..+....|..++.-|+.+|-+.||...++.++
T Consensus 284 -~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 284 -IGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred -cCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 0001111111 112345669999999999999999999999874
No 378
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-32 Score=260.67 Aligned_cols=269 Identities=22% Similarity=0.340 Sum_probs=204.2
Q ss_pred CHHHHHHHhcCCCCCcccceeCceEEEEEE-EcCCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeee
Q 009404 216 SYSALEHATDKFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSE 293 (535)
Q Consensus 216 ~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~-~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~ 293 (535)
++.++-+.|+ +.||+|+++.|--+. ..+|..+|||++.+. ....+....+|++++.+. .|+||++++.+|.+
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 3566666664 689999999999886 567999999999876 345566788999999999 59999999999987
Q ss_pred cccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc---E
Q 009404 294 FRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLN---A 370 (535)
Q Consensus 294 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~---v 370 (535)
+...|||||-|.||+|...|++. +.+++.++..+..+|+.||.|||.+| |.||||||+|||-..... |
T Consensus 148 ----d~~FYLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPv 218 (463)
T KOG0607|consen 148 ----DTRFYLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPV 218 (463)
T ss_pred ----cceEEEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCce
Confidence 55779999999999999999875 55899999999999999999999999 999999999999975544 8
Q ss_pred EEEecCCcccccc--CCCCCCCCCCCccccCccccCccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCccccc
Q 009404 371 KITDLGMAKRLKA--DGLPSCSSSPARMQGTFGYFAPEYAM-----VGRASLMSDVFSFGVVLLELITGRQPIHRSITKG 443 (535)
Q Consensus 371 kL~DFGla~~~~~--~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~ 443 (535)
||+||.+...+.. +-.+.........+|+..|||||++. ...|..+.|.||||||||-||+|.+||...-..+
T Consensus 219 KiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~d 298 (463)
T KOG0607|consen 219 KICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGAD 298 (463)
T ss_pred eeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCc
Confidence 9999998765432 22333344455678999999999864 3458999999999999999999999997543211
Q ss_pred cchhhhhccccccC--cccccccCCCCCCCCCCCHH----HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 444 EESLVLWATPRLQD--SGTVISELPDPRLKGDFPKE----EMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 444 ~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~----~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
- -|.....-. ....+..+.+. .-+||+. ++....+++...+..|+.+|.++.+++.
T Consensus 299 C----GWdrGe~Cr~CQ~~LFesIQEG--kYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 299 C----GWDRGEVCRVCQNKLFESIQEG--KYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred C----CccCCCccHHHHHHHHHHHhcc--CCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 0 011000000 00011111111 1234443 3555678899999999999999999998
No 379
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=279.60 Aligned_cols=244 Identities=23% Similarity=0.289 Sum_probs=198.1
Q ss_pred CcccceeCceEEEEEEEc-CCcEEEEEEeccCCCC-ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEec
Q 009404 230 SNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGP-NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
.++||+|.||+||-|+++ +|+.||||++.+...+ +.+..+..|+.+|++++||.||.+..-|.. ....++|||-
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET----~ervFVVMEK 644 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET----PERVFVVMEK 644 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC----CceEEEEehh
Confidence 478999999999999875 5999999999866433 334568899999999999999999987765 4567999999
Q ss_pred CCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC---CCcEEEEecCCccccccC
Q 009404 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE---NLNAKITDLGMAKRLKAD 384 (535)
Q Consensus 308 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~---~~~vkL~DFGla~~~~~~ 384 (535)
+ +|+..+.+-.....++++.....++.||+.||.|||.++ |+|.||||+|||+.+ -.++||+|||+|+.++..
T Consensus 645 l-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk 720 (888)
T KOG4236|consen 645 L-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK 720 (888)
T ss_pred h-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchh
Confidence 9 566666664445567999999999999999999999998 999999999999954 456999999999998764
Q ss_pred CCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCccccccc
Q 009404 385 GLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISE 464 (535)
Q Consensus 385 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (535)
. .....+||+.|+|||++.+..|+..-|+||.|||+|--++|..||....+..+ +
T Consensus 721 s------FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdInd-------------------Q 775 (888)
T KOG4236|consen 721 S------FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIND-------------------Q 775 (888)
T ss_pred h------hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhH-------------------H
Confidence 3 34567899999999999999999999999999999999999999954322111 1
Q ss_pred CCC--CCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 465 LPD--PRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 465 ~~~--~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+.. -.+......+++....+||...|+..-++|-+.+..+..
T Consensus 776 IQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 776 IQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred hhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 111 111223345666778999999999999999998877654
No 380
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-33 Score=275.07 Aligned_cols=262 Identities=26% Similarity=0.355 Sum_probs=197.8
Q ss_pred cCCCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCCCCChh------HHHHHHHHHHhccCCCCccceeeeeeecccC
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNAD------SVFLTEVDMLSRLHHCHVVPLVGYCSEFRGK 297 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~~~~~~------~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 297 (535)
++|-.+.+||+|||+.||+|.+ ...+.||||+-........+ +...+|..+-+.|.||.||++++|+.-..
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt-- 540 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT-- 540 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc--
Confidence 4566678899999999999974 45889999987644322221 22557899999999999999999997532
Q ss_pred cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC---CCCcEEEEe
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD---ENLNAKITD 374 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~---~~~~vkL~D 374 (535)
...+-|+||++|.+|.-||... +.+++.++..|+.||+.||.||.+.. |+|+|.||||.||||- .-|.+||+|
T Consensus 541 -dsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 541 -DSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred -ccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeee
Confidence 2458899999999999999865 56899999999999999999999874 6799999999999994 557899999
Q ss_pred cCCccccccCCCCCCC--CCCCccccCccccCccccccC----CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh
Q 009404 375 LGMAKRLKADGLPSCS--SSPARMQGTFGYFAPEYAMVG----RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV 448 (535)
Q Consensus 375 FGla~~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~----~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~ 448 (535)
||+++.+..+.+.... .......||++|++||.+.-+ ..+.|+||||.|||+|..+.|+.||........ +.
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd--IL 694 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD--IL 694 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHH--HH
Confidence 9999999876554222 234457899999999988644 468899999999999999999999965433211 11
Q ss_pred hhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 449 LWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
... .. .....-.+ +.-+..+....++|++||+..-++|....++..
T Consensus 695 qeN--------TI-lkAtEVqF--P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 695 QEN--------TI-LKATEVQF--PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred hhh--------ch-hcceeccC--CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 000 00 00000000 111223445778999999999999999888765
No 381
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.98 E-value=1.5e-31 Score=257.90 Aligned_cols=238 Identities=31% Similarity=0.411 Sum_probs=190.2
Q ss_pred CceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCCCCCHHH
Q 009404 237 GSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRD 315 (535)
Q Consensus 237 ~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~ 315 (535)
+||.||+|+..+ ++.+++|++...........+.+|++.+++++|+|++++++++.. ....+++|||+++++|.+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~----~~~~~l~~e~~~~~~L~~ 76 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED----EDKLYLVMEYCDGGDLFD 76 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee----CCEEEEEEeCCCCCCHHH
Confidence 589999999874 899999999876544335678999999999999999999999876 356799999999999999
Q ss_pred hhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCc
Q 009404 316 CLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPAR 395 (535)
Q Consensus 316 ~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~ 395 (535)
++.... .+++..+..++.+++.++.|||+.+ ++|+||+|+||++++++.++|+|||.+....... ....
T Consensus 77 ~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~------~~~~ 145 (244)
T smart00220 77 LLKKRG--RLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG------LLTT 145 (244)
T ss_pred HHHhcc--CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc------cccc
Confidence 987642 3899999999999999999999998 9999999999999999999999999998765432 2234
Q ss_pred cccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCCCCCCCC
Q 009404 396 MQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFP 475 (535)
Q Consensus 396 ~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 475 (535)
..++..|++||.+....++.++|||+||+++|+|++|..||...... ....... ..........
T Consensus 146 ~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~--~~~~~~~--------------~~~~~~~~~~ 209 (244)
T smart00220 146 FVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL--LELFKKI--------------GKPKPPFPPP 209 (244)
T ss_pred ccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHH--------------hccCCCCccc
Confidence 45788999999998888999999999999999999999998643111 1111100 0000000000
Q ss_pred H-HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 476 K-EEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 476 ~-~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
. ..+..+.+++.+||..+|++||++.++++
T Consensus 210 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 210 EWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred cccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 0 03345888999999999999999999987
No 382
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=1.1e-33 Score=259.39 Aligned_cols=274 Identities=23% Similarity=0.324 Sum_probs=197.7
Q ss_pred CCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCC-hhHHHHHHHHHHhccCCCCccceeeeeeecc----cCcce
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPN-ADSVFLTEVDMLSRLHHCHVVPLVGYCSEFR----GKRAM 300 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~~~ 300 (535)
|....+||+|.||+||+|+.++ |+.||+|+...+...+ .-..-++|+++|..++|+|++.++..|.... .....
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 4445789999999999998765 7889998776433222 2234689999999999999999999885432 22345
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.|+||++++. +|.-.|... ...++..++.++..++..||.|+|+.. |+|||+|+.|+||+.++.+||+|||+++.
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeeccccccc
Confidence 7999999965 898888653 255899999999999999999999997 99999999999999999999999999987
Q ss_pred cccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhh--------c
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLW--------A 451 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~--------~ 451 (535)
+...+... ....+..+.|.+|.+||.+.+ ..++.+.|||.-|||+.||++|.+-++.........+... +
T Consensus 174 fs~~~n~~-kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkev 252 (376)
T KOG0669|consen 174 FSTSKNVV-KPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEV 252 (376)
T ss_pred eecccccC-CCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCccc
Confidence 76544322 233566778999999998875 5689999999999999999999888766543322111100 0
Q ss_pred cccccCcccccccCCCCCC-CCCC--------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 452 TPRLQDSGTVISELPDPRL-KGDF--------PKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~l-~~~~--------~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
++..... ..+..+.-+.+ .+.+ |-.-.+...+|+..++..||.+|+++++++.+-
T Consensus 253 WP~~d~l-pL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 253 WPNVDNL-PLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred CCCcccc-hHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence 0000000 00000000000 0000 000013467899999999999999999998653
No 383
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=4.5e-33 Score=299.72 Aligned_cols=258 Identities=22% Similarity=0.299 Sum_probs=204.0
Q ss_pred HHHHHHHhcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeee
Q 009404 217 YSALEHATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSE 293 (535)
Q Consensus 217 ~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~ 293 (535)
..+++.-.++|.+.++||+|+||.|..++.+. ++.+|.|+++.-. ......-|.+|-++|..-+.+=|+.+.-.|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 34566667899999999999999999999865 8999999997521 11223348899999998899999999877766
Q ss_pred cccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEE
Q 009404 294 FRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKIT 373 (535)
Q Consensus 294 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~ 373 (535)
..++|+|||||+||+|-..+.... .+++.-+..++..|+-||.-||+.| +|||||||+|||||..|++||+
T Consensus 147 ----~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLA 217 (1317)
T KOG0612|consen 147 ----ERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLA 217 (1317)
T ss_pred ----ccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeec
Confidence 668899999999999999998763 6999999999999999999999999 9999999999999999999999
Q ss_pred ecCCccccccCCCCCCCCCCCccccCccccCccccc----c-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh
Q 009404 374 DLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAM----V-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV 448 (535)
Q Consensus 374 DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~ 448 (535)
|||.+-.+..++.- .....+|||-|.+||++. + +.|....|.||+||++|||+.|..||+.....+.++
T Consensus 218 DFGsClkm~~dG~V----~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~-- 291 (1317)
T KOG0612|consen 218 DFGSCLKMDADGTV----RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYG-- 291 (1317)
T ss_pred cchhHHhcCCCCcE----EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHH--
Confidence 99999888766532 234568999999999985 3 679999999999999999999999997543222211
Q ss_pred hhccccccCcccccccCCCCCCCCCCC--HHHHHHHHHHHHHhcccCCCCCCC---HHHHHH
Q 009404 449 LWATPRLQDSGTVISELPDPRLKGDFP--KEEMQIMAYLAKECLQLDPDARPT---MSEVVQ 505 (535)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~l~~li~~cl~~dP~~RPt---~~evl~ 505 (535)
++.+-.-...|| ..++....+||.+.+. +|+.|.. ++++-.
T Consensus 292 ---------------KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 292 ---------------KIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred ---------------HHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 122211112233 2345567777776654 7888877 776654
No 384
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.1e-32 Score=278.49 Aligned_cols=244 Identities=23% Similarity=0.264 Sum_probs=195.0
Q ss_pred HhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcce
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 300 (535)
+++.|.....+|.|+|+.|-++... +++..+||++...... -.+|+.++... +||||+++.+++.+ ..+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~-----~~~e~~~~~~~~~h~niv~~~~v~~~----~~~ 390 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD-----NQDEIPISLLVRDHPNIVKSHDVYED----GKE 390 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccccc-----cccccchhhhhcCCCcceeecceecC----Cce
Confidence 4667777888999999999999865 4788999999865221 24567666655 89999999999887 567
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe-CCCCcEEEEecCCcc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL-DENLNAKITDLGMAK 379 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl-~~~~~vkL~DFGla~ 379 (535)
.|+|||.+.++-|.+.+... +.....+..|+.+|+.|+.|||++| ++||||||+|||+ ++.++++|+|||.++
T Consensus 391 ~~~v~e~l~g~ell~ri~~~---~~~~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~ 464 (612)
T KOG0603|consen 391 IYLVMELLDGGELLRRIRSK---PEFCSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWS 464 (612)
T ss_pred eeeeehhccccHHHHHHHhc---chhHHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhh
Confidence 79999999999888877653 2233777889999999999999998 9999999999999 699999999999998
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
....+. ....-|..|.|||++....++.++|+||||++||+||+|+.||.....+. .
T Consensus 465 ~~~~~~--------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~--e------------- 521 (612)
T KOG0603|consen 465 ELERSC--------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI--E------------- 521 (612)
T ss_pred hCchhh--------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH--H-------------
Confidence 876541 12234678999999999999999999999999999999999996543320 0
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
....+..+ .+...+++...+|+..||+.||.+||+|.|+...=+.
T Consensus 522 -i~~~i~~~----~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 522 -IHTRIQMP----KFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred -HHHhhcCC----ccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 01112122 2235566778999999999999999999999876554
No 385
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=2.8e-31 Score=280.15 Aligned_cols=270 Identities=20% Similarity=0.265 Sum_probs=181.6
Q ss_pred HhcCCCCCcccceeCceEEEEEEE-----------------cCCcEEEEEEeccCCCCChhH--------------HHHH
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQL-----------------TDGRIVAVKRFKTQGGPNADS--------------VFLT 271 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~-----------------~~g~~vaVK~l~~~~~~~~~~--------------~~~~ 271 (535)
..++|++.++||+|+||+||+|.+ .+++.||||++..... ...+ .+..
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~-~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ-GVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch-hhHHHHHhhhhhhhcccchhHH
Confidence 356899999999999999999964 2357899999875432 1112 2345
Q ss_pred HHHHHhccCCCCc-----cceeeeeeeccc----CcceEEEEEecCCCCCHHHhhhhcc---------------------
Q 009404 272 EVDMLSRLHHCHV-----VPLVGYCSEFRG----KRAMRLLVFEFMPNGNLRDCLDGVL--------------------- 321 (535)
Q Consensus 272 Ei~~l~~l~H~ni-----v~l~g~~~~~~~----~~~~~~lV~e~~~~gsL~~~l~~~~--------------------- 321 (535)
|+.++.+++|.++ ++++++|..... .....+|||||+++++|.++|+...
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 7777777766554 677888764211 1235799999999999999986421
Q ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCc
Q 009404 322 -VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTF 400 (535)
Q Consensus 322 -~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~ 400 (535)
...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++........ .......+|+
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~----~~~~~g~~tp 374 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN----FNPLYGMLDP 374 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCc----cCccccCCCc
Confidence 112467888999999999999999998 99999999999999999999999999976543211 1111223478
Q ss_pred cccCccccccCC----------------------CCccchHHHHHHHHHHHHhCCC-CCCCccccccchhhhhccccccC
Q 009404 401 GYFAPEYAMVGR----------------------ASLMSDVFSFGVVLLELITGRQ-PIHRSITKGEESLVLWATPRLQD 457 (535)
Q Consensus 401 ~y~aPE~~~~~~----------------------~s~ksDVwSlGvil~eLltG~~-P~~~~~~~~~~~~~~~~~~~~~~ 457 (535)
.|+|||.+.... ...+.||||+||++|+|++|.. |+........ ....+. ....
T Consensus 375 ~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~-~~~~~~-~~~~- 451 (507)
T PLN03224 375 RYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNT-ELRQYD-NDLN- 451 (507)
T ss_pred ceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhh-HHhhcc-chHH-
Confidence 999999875322 1234799999999999999875 6542211100 000000 0000
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCC---CCCCCHHHHHHH
Q 009404 458 SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDP---DARPTMSEVVQI 506 (535)
Q Consensus 458 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP---~~RPt~~evl~~ 506 (535)
.......................+|+.++|..+| .+|+|+.|++++
T Consensus 452 ---~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 452 ---RWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ---HHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 0000011111111122334567889999998765 689999999975
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=7.4e-32 Score=291.20 Aligned_cols=264 Identities=21% Similarity=0.260 Sum_probs=169.7
Q ss_pred HhcCCCCCcccceeCceEEEEEEEcC-----CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeee-c-c
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLTD-----GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSE-F-R 295 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~~-----g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~-~ 295 (535)
..++|+..+.||+|+||.||+|++.+ +..||||++..... .+.+..| .+....+.++..++..+.. . .
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 45788999999999999999999754 68999999864321 1111111 1222223333332222111 1 1
Q ss_pred cCcceEEEEEecCCCCCHHHhhhhcccC------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 009404 296 GKRAMRLLVFEFMPNGNLRDCLDGVLVE------------------GMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDI 357 (535)
Q Consensus 296 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DL 357 (535)
......++||||+++++|.+++...... ......+..++.|++.||+|||+++ |+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcC
Confidence 2345679999999999999998643110 0123345679999999999999998 999999
Q ss_pred CCCCEEeCC-CCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccC----------------------CCC
Q 009404 358 KSSNILLDE-NLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG----------------------RAS 414 (535)
Q Consensus 358 k~~NILl~~-~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~s 414 (535)
||+|||+++ ++.+||+|||+++.+.... ........+++.|+|||.+... .++
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~----~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGI----NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCcccccccc----ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 999999985 5789999999998664332 1223456789999999965322 234
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCccccc-------cchhhhhccccccCcccccccCCCCCCCCCC--CHHHHHHHHHH
Q 009404 415 LMSDVFSFGVVLLELITGRQPIHRSITKG-------EESLVLWATPRLQDSGTVISELPDPRLKGDF--PKEEMQIMAYL 485 (535)
Q Consensus 415 ~ksDVwSlGvil~eLltG~~P~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~l~~l 485 (535)
.++|||||||+||||+++..|++...... ......|... ......+.+...+ .........+|
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~d~~~~~~~dL 429 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKL--------VEPRASPDLRRGFEVLDLDGGAGWEL 429 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHh--------hccccchhhhhhhhhccccchHHHHH
Confidence 56799999999999999776654221100 0001111100 0000000000000 00112235689
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 009404 486 AKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 486 i~~cl~~dP~~RPt~~evl~~ 506 (535)
+.+||+.||++|||+.|++++
T Consensus 430 i~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 430 LKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred HHHHccCCcccCCCHHHHhCC
Confidence 999999999999999999986
No 387
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-32 Score=263.72 Aligned_cols=274 Identities=21% Similarity=0.236 Sum_probs=201.7
Q ss_pred eCHHHHHHHhcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccC--CC----Cccce
Q 009404 215 FSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH--HC----HVVPL 287 (535)
Q Consensus 215 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~--H~----niv~l 287 (535)
+-|..-...+++|.+...+|+|.||.|-...+.. +..||||+++.-. ..++.-+-|+++|.++. .| -++.+
T Consensus 79 ~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~--kYreAa~iEi~vLqki~~~DP~g~~rcv~m 156 (415)
T KOG0671|consen 79 YVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD--KYREAALIEIEVLQKINESDPNGKFRCVQM 156 (415)
T ss_pred EEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH--HHhhHHHHHHHHHHHHHhcCCCCceEEEee
Confidence 3344455568999999999999999999998654 7899999998543 33344677999999993 22 24555
Q ss_pred eeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC--
Q 009404 288 VGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD-- 365 (535)
Q Consensus 288 ~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~-- 365 (535)
.+++.. ..+.++|+|.+ |-|+.++|..+.-.+++..++..|+.|++++++|||+.+ ++|-||||+|||+.
T Consensus 157 ~~wFdy----rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss 228 (415)
T KOG0671|consen 157 RDWFDY----RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSS 228 (415)
T ss_pred ehhhhc----cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEecc
Confidence 555654 55779999999 559999999877788999999999999999999999998 99999999999992
Q ss_pred ------------------CCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHH
Q 009404 366 ------------------ENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLL 427 (535)
Q Consensus 366 ------------------~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~ 427 (535)
.+..++|+|||.|...... ....+.|..|.|||++.+-.++..+||||+||||.
T Consensus 229 ~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~--------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ 300 (415)
T KOG0671|consen 229 EYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH--------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILV 300 (415)
T ss_pred ceEEEeccCCccceeccCCCcceEEEecCCcceeccC--------cceeeeccccCCchheeccCcCCccCceeeeeEEE
Confidence 1345899999999875443 24567899999999999999999999999999999
Q ss_pred HHHhCCCCCCCccccccchhhhhcccc-------------------cc-------CcccccccCCCCC-CCCCCCHHHHH
Q 009404 428 ELITGRQPIHRSITKGEESLVLWATPR-------------------LQ-------DSGTVISELPDPR-LKGDFPKEEMQ 480 (535)
Q Consensus 428 eLltG~~P~~~~~~~~~~~~~~~~~~~-------------------~~-------~~~~~~~~~~~~~-l~~~~~~~~~~ 480 (535)
||.||...|+.....+........... +. .....+.+...+. ........+..
T Consensus 301 ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~ 380 (415)
T KOG0671|consen 301 ELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHV 380 (415)
T ss_pred EeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHh
Confidence 999999988765432210000000000 00 0000000001000 00112234455
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 481 IMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 481 ~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.+.+|+.+||..||.+|+|+.|++.+
T Consensus 381 ~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 381 QLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred HHHHHHHHHHccCccccccHHHHhcC
Confidence 69999999999999999999999863
No 388
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-32 Score=271.68 Aligned_cols=253 Identities=22% Similarity=0.302 Sum_probs=208.0
Q ss_pred cCCCCCcccceeCceEEEEEEEcCCc-EEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTDGR-IVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~g~-~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
.++.....||-|+||.|=++..+... .+|+|.++... .....+....|-.+|...+.|.||+++..+.+ ..+.
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd----~kyv 495 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRD----SKYV 495 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhcc----chhh
Confidence 44555667999999999999876543 48999887653 23344557889999999999999999988776 5678
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
|++||-|-||.|...|+.. ..++..+...++..+.+|++|||+++ |++|||||+|.+||.+|-+||.|||+|+.+
T Consensus 496 YmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki 570 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKI 570 (732)
T ss_pred hhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHh
Confidence 9999999999999999875 56899999999999999999999999 999999999999999999999999999988
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
... ...-.+.||+.|.|||.+.+......+|.||||+++|||++|.+||....+-....+....
T Consensus 571 ~~g------~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkG---------- 634 (732)
T KOG0614|consen 571 GSG------RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKG---------- 634 (732)
T ss_pred ccC------CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhh----------
Confidence 764 3345689999999999999999999999999999999999999999766544333322211
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHhh
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT-----MSEVVQILST 509 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~~L~~ 509 (535)
+. ...+|..+.....+|+++..+.+|.+|.. +.+|-++-+-
T Consensus 635 id-------~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf 680 (732)
T KOG0614|consen 635 ID-------KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWF 680 (732)
T ss_pred hh-------hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhh
Confidence 11 12455566667888999999999999976 6777766543
No 389
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=4.9e-31 Score=276.91 Aligned_cols=246 Identities=29% Similarity=0.426 Sum_probs=185.7
Q ss_pred CCCCcccceeCceE-EEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEEE
Q 009404 227 FSGSNIVGQGGSSY-VYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 227 f~~~~~LG~G~fG~-Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
|...+++|.|+.|+ ||+|... |+.||||++-.. ......+|+..|+.- +||||+++++.=.+ +.+.||.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d----~qF~YIa 581 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE----FFDFAQREIQLLQESDEHPNVIRYYCSEQD----RQFLYIA 581 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH----hHHHHHHHHHHHHhccCCCceEEEEeeccC----CceEEEE
Confidence 44456799999987 8999985 899999998643 223357899999988 79999999865332 6688999
Q ss_pred EecCCCCCHHHhhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-----CCcEEEEecCC
Q 009404 305 FEFMPNGNLRDCLDGV--LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE-----NLNAKITDLGM 377 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~-----~~~vkL~DFGl 377 (535)
.|.| ..+|.++++.. ..........+.+..|++.||++||+.+ |+||||||.||||+. ...++|+|||+
T Consensus 582 lELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfgl 657 (903)
T KOG1027|consen 582 LELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGL 657 (903)
T ss_pred ehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEeccccc
Confidence 9999 56999999873 1111222456788999999999999998 999999999999965 35689999999
Q ss_pred ccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhC-CCCCCCccccccchhhhhcccccc
Q 009404 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITG-RQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 378 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG-~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
++.+..+... -.......||.+|+|||.+.....+.++|||||||++|+.++| ..||.....++. . +.
T Consensus 658 sKkl~~~~sS--~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~-N-Il------- 726 (903)
T KOG1027|consen 658 SKKLAGGKSS--FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA-N-IL------- 726 (903)
T ss_pred ccccCCCcch--hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh-h-hh-------
Confidence 9998765432 2235567899999999999999999999999999999999996 789965433211 0 00
Q ss_pred CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
.....+..+ ....++ ...+||.+|++.+|..||++.+|+.
T Consensus 727 ~~~~~L~~L-------~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 727 TGNYTLVHL-------EPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred cCccceeee-------ccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 000000000 001111 5788999999999999999999974
No 390
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-30 Score=231.93 Aligned_cols=209 Identities=27% Similarity=0.371 Sum_probs=170.0
Q ss_pred HHHHhcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccC
Q 009404 220 LEHATDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGK 297 (535)
Q Consensus 220 l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 297 (535)
++...+.......||+|++|.|=+-++. +|+..|||++...-..+.....++|+++..+- ..|.+|.++|....
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r---- 116 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR---- 116 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc----
Confidence 4555555666778999999999888764 69999999998776555666688899876554 89999999997655
Q ss_pred cceEEEEEecCCCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEec
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDL 375 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DF 375 (535)
....++.||.| ..||..|-+... +..+++..+-+|+..+..||.|||++- .++|||+||+|||++.+|+||++||
T Consensus 117 egdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDF 193 (282)
T KOG0984|consen 117 EGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDF 193 (282)
T ss_pred cccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEccc
Confidence 34569999999 568888765432 345899999999999999999999976 5999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCCccccCccccCcccccc----CCCCccchHHHHHHHHHHHHhCCCCCCCccc
Q 009404 376 GMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV----GRASLMSDVFSFGVVLLELITGRQPIHRSIT 441 (535)
Q Consensus 376 Gla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~ksDVwSlGvil~eLltG~~P~~~~~~ 441 (535)
|.+-.+.+.. ..+...|-..|||||.+.. ..|+-+|||||||+.+.||.+++.||+....
T Consensus 194 GIsG~L~dSi------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 194 GISGYLVDSI------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred ccceeehhhh------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 9998775431 1222457788999998853 3689999999999999999999999975443
No 391
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.8e-30 Score=244.48 Aligned_cols=250 Identities=22% Similarity=0.311 Sum_probs=193.6
Q ss_pred hcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCCh-h-HHHHHHHHHHhcc-CCCCccceeeeeeecccCcc
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNA-D-SVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~-~-~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 299 (535)
.++|..+++||+|++..|..+++.. .+.+|+|+++.....+. + .=..+|-.+..+- +||.+|.+..++.. ..
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt----es 324 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT----ES 324 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc----cc
Confidence 4678889999999999999999764 78899999986532211 1 1145677777665 89999999988765 55
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
.+++|.||+++|+|--++++. ..+++..+..+...|.-||.|||++| |++||||.+|||+|..|++||+|+|+.+
T Consensus 325 rlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmck 399 (593)
T KOG0695|consen 325 RLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCK 399 (593)
T ss_pred eEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhh
Confidence 779999999999998877654 56999999999999999999999999 9999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccc-cchhhhhccccccCc
Q 009404 380 RLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKG-EESLVLWATPRLQDS 458 (535)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~-~~~~~~~~~~~~~~~ 458 (535)
.-..+ ......+.||+.|.|||.+.+..|....|.|+|||+++||+.|+.||+....+. +.....+.
T Consensus 400 e~l~~-----gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedyl------- 467 (593)
T KOG0695|consen 400 EGLGP-----GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYL------- 467 (593)
T ss_pred cCCCC-----CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHH-------
Confidence 65443 345677899999999999999999999999999999999999999997432221 11111111
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 009404 459 GTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPT 499 (535)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt 499 (535)
.+-+....+ ..|...+-....+++.-|++||.+|..
T Consensus 468 ---fqvilekqi--riprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 468 ---FQVILEKQI--RIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred ---HHHHhhhcc--cccceeehhhHHHHHHhhcCCcHHhcC
Confidence 111111111 123333334566888889999999853
No 392
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=2.3e-28 Score=229.75 Aligned_cols=212 Identities=35% Similarity=0.545 Sum_probs=181.7
Q ss_pred cceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCCCC
Q 009404 233 VGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG 311 (535)
Q Consensus 233 LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~g 311 (535)
||+|.+|.||++...+ ++.+++|++...........+.+|++.++.+.|++++++++++.. ....+++|||++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~----~~~~~~~~e~~~~~ 76 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFED----ENHLYLVMEYCEGG 76 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeec----CCeEEEEEecCCCC
Confidence 6899999999999865 899999999866443234568999999999999999999999876 34679999999999
Q ss_pred CHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CCcEEEEecCCccccccCCCCCCC
Q 009404 312 NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE-NLNAKITDLGMAKRLKADGLPSCS 390 (535)
Q Consensus 312 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~-~~~vkL~DFGla~~~~~~~~~~~~ 390 (535)
+|.+++.... ..+++..+..++.++++++++||+.+ ++|+||+|.||+++. ++.++|+|||.+........
T Consensus 77 ~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---- 148 (215)
T cd00180 77 SLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---- 148 (215)
T ss_pred cHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc----
Confidence 9999987642 35899999999999999999999998 999999999999999 89999999999987654321
Q ss_pred CCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCC
Q 009404 391 SSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPR 469 (535)
Q Consensus 391 ~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (535)
......+...|++||..... ..+.++|+|++|+++++|
T Consensus 149 -~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------- 187 (215)
T cd00180 149 -LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------- 187 (215)
T ss_pred -hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------
Confidence 12334567889999998877 889999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 470 LKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
..+.+++..|++.+|++||++.++++.|
T Consensus 188 ----------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 2378899999999999999999998753
No 393
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-28 Score=244.29 Aligned_cols=135 Identities=26% Similarity=0.343 Sum_probs=119.2
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccC-----C---CCccceeeeeeecc
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-----H---CHVVPLVGYCSEFR 295 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~-----H---~niv~l~g~~~~~~ 295 (535)
.+|.+.++||.|.|++||++.+. +.+.||+|+.+... ...+.-+.||++|++++ | .+||+|++.|.-..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq--hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ--HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh--HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 68889999999999999999864 47899999998642 33344678999999882 3 37999999999888
Q ss_pred cCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 009404 296 GKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364 (535)
Q Consensus 296 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl 364 (535)
.++.++++|+|++ |.+|..+|.....++++...+..|++||+.||.|||++. .|||.||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 8889999999999 779999998888889999999999999999999999987 59999999999999
No 394
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1.5e-29 Score=229.19 Aligned_cols=259 Identities=20% Similarity=0.279 Sum_probs=192.8
Q ss_pred hcCCCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCCCCChhHHHHHHHHHHhccC-CCCccceeeeeeecccCcceE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~~~ 301 (535)
.++|++.+++|+|.+++||.|.. .+.+.++||+++.-. .+.+.+|+++|..|. ||||+.++++..+.. ...+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~--Sktp 110 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK----KKKIKREIKILQNLRGGPNIIKLLDIVKDPE--SKTP 110 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH----HHHHHHHHHHHHhccCCCCeeehhhhhcCcc--ccCc
Confidence 36788889999999999999984 568899999998532 344889999999996 999999999988755 3466
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC-CCCcEEEEecCCccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD-ENLNAKITDLGMAKR 380 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~-~~~~vkL~DFGla~~ 380 (535)
.||+||+.+.+..... ..++...+..+..+++.||.|.|++| |+|||+||.|+++| +....+|+|+|+|.+
T Consensus 111 aLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEF 182 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 182 (338)
T ss_pred hhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhh
Confidence 8999999998877654 44778889999999999999999999 99999999999998 455699999999988
Q ss_pred cccCCCCCCCCCCCccccCccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccc-----------hhh
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEE-----------SLV 448 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~-----------~~~ 448 (535)
..... .....+.+..|--||.+.. ..|...-|+|||||+|..|+..+.||.......++ .+.
T Consensus 183 YHp~~------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~ 256 (338)
T KOG0668|consen 183 YHPGK------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELY 256 (338)
T ss_pred cCCCc------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHH
Confidence 76543 2233455667889998865 45788999999999999999999998653322111 000
Q ss_pred hhc-------cccccC-----cccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 449 LWA-------TPRLQD-----SGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 449 ~~~-------~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
.+. .+.+.+ .......+..+.-... ......+++.+.|..|..+|||+.|.+.+
T Consensus 257 ~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl----~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 257 AYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHL----VSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHccCCChhHhhHhhccccccHHHhCCcccccc----CChHHHHHHHHHHhhccccccchHHHhcC
Confidence 000 000000 0001111111111111 12457889999999999999999998864
No 395
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.1e-28 Score=251.28 Aligned_cols=209 Identities=23% Similarity=0.326 Sum_probs=169.5
Q ss_pred CCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCC--CChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
-|..++.||-|+||+|.++.-- ....+|.|.|.+..- .........|-++|..-+.+=||+|+-.|.+ ...+|
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQD----kdnLY 705 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQD----KDNLY 705 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEecc----CCceE
Confidence 3555677999999999999744 367899999875421 1222336778999999999999999977766 55779
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+||+|++||++-.+|-+. .-|.+..+..++..++.|+++.|..| +|||||||+|||||.+|++||+||||+.-+.
T Consensus 706 FVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfR 780 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 780 (1034)
T ss_pred EEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccce
Confidence 999999999999998764 44888889999999999999999999 9999999999999999999999999987543
Q ss_pred cC---CCCC---------------------CC-------------CCCCccccCccccCccccccCCCCccchHHHHHHH
Q 009404 383 AD---GLPS---------------------CS-------------SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVV 425 (535)
Q Consensus 383 ~~---~~~~---------------------~~-------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvi 425 (535)
.. .+.. +. ......+||..|+|||++....++.-.|.||.|||
T Consensus 781 WTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvi 860 (1034)
T KOG0608|consen 781 WTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVI 860 (1034)
T ss_pred eccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHH
Confidence 21 0000 00 00123469999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCccccc
Q 009404 426 LLELITGRQPIHRSITKG 443 (535)
Q Consensus 426 l~eLltG~~P~~~~~~~~ 443 (535)
||||+.|+.||....+.+
T Consensus 861 l~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 861 LYEMLVGQPPFLADTPGE 878 (1034)
T ss_pred HHHHhhCCCCccCCCCCc
Confidence 999999999998766554
No 396
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=3.1e-29 Score=253.34 Aligned_cols=197 Identities=22% Similarity=0.296 Sum_probs=168.4
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhH-------HHHHHHHHHhccC---CCCccceeeeeee
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADS-------VFLTEVDMLSRLH---HCHVVPLVGYCSE 293 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~-------~~~~Ei~~l~~l~---H~niv~l~g~~~~ 293 (535)
.+|+..+.||+|+||.|+.+.++. ...|+||++.+..--.... ..-.|+.+|+.++ |+||++++++|.+
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 458889999999999999999865 6789999987653211110 1346999999996 9999999999987
Q ss_pred cccCcceEEEEEecC-CCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEE
Q 009404 294 FRGKRAMRLLVFEFM-PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKI 372 (535)
Q Consensus 294 ~~~~~~~~~lV~e~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL 372 (535)
+...||+||-. ++-+|+++++.. ..+++..+..|+.||+.|+++||+++ |+|||||-+||.|+.+|-+||
T Consensus 641 ----dd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~kl 711 (772)
T KOG1152|consen 641 ----DDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKL 711 (772)
T ss_pred ----CCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEE
Confidence 55779999975 566999999864 56999999999999999999999999 999999999999999999999
Q ss_pred EecCCccccccCCCCCCCCCCCccccCccccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCC
Q 009404 373 TDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRA-SLMSDVFSFGVVLLELITGRQPIH 437 (535)
Q Consensus 373 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSlGvil~eLltG~~P~~ 437 (535)
+|||.+..... .....++||..|.|||++.+.+| ...-|||++|++||.++....||.
T Consensus 712 idfgsaa~~ks-------gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 712 IDFGSAAYTKS-------GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eeccchhhhcC-------CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99999987653 34567899999999999998887 567899999999999999998885
No 397
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-30 Score=241.65 Aligned_cols=272 Identities=24% Similarity=0.306 Sum_probs=191.8
Q ss_pred CCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeecccC-cceEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGK-RAMRLL 303 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~-~~~~~l 303 (535)
.+..+.||-|+||.||..++ ++|+.||+|++..-- .-...+.+.+|+++|..++|.|++..++...-...+ -.++|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 34467899999999999986 469999999986432 112234588999999999999999988765321111 124578
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
++|.| ..+|-..+-. .+.++...+.-+++||++||+|||+.+ |.||||||.|.|++.|...||+|||+++....
T Consensus 135 ~TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccch
Confidence 88888 4577766643 466888999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCCCCCCCCccccCccccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh--hhccccccCccc
Q 009404 384 DGLPSCSSSPARMQGTFGYFAPEYAMVG-RASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV--LWATPRLQDSGT 460 (535)
Q Consensus 384 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~--~~~~~~~~~~~~ 460 (535)
++. ...+..+.|..|.|||.+.+. .|+.+.||||.|||+.||+..+..|+...+.....+. ....+..+..+.
T Consensus 209 d~~----~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ 284 (449)
T KOG0664|consen 209 RDR----LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKY 284 (449)
T ss_pred hhh----hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHH
Confidence 432 223445678899999999864 5899999999999999999988888654333221111 111222211110
Q ss_pred cc----ccCC-----CCCCC----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 009404 461 VI----SELP-----DPRLK----GDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILS 508 (535)
Q Consensus 461 ~~----~~~~-----~~~l~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 508 (535)
.- ..+. .|.+. ..-+..-......+...++..||+.|.+..+.+..+.
T Consensus 285 ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 285 ACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred HhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 00 0011 11111 0111122233556777889999999999998887543
No 398
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=4.9e-27 Score=224.27 Aligned_cols=200 Identities=30% Similarity=0.422 Sum_probs=169.5
Q ss_pred CCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~ 305 (535)
|...+.||.|++|.||++...+ ++.+++|.+...........+.+|++.++.++|+|++++++++.. ....++++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~----~~~~~~v~ 76 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFED----PEPLYLVM 76 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeec----CCceEEEE
Confidence 4556789999999999999875 889999999865433245568899999999999999999998875 34679999
Q ss_pred ecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 306 EFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 306 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
||+++++|.+++..... .+++.....++.+++.++.+||+.+ ++|+||++.||+++.++.++|+|||.+.......
T Consensus 77 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~ 152 (225)
T smart00221 77 EYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDL 152 (225)
T ss_pred eccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc
Confidence 99999999999976422 1889999999999999999999998 9999999999999999999999999998775432
Q ss_pred CCCCCCCCCccccCccccCcccc-ccCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYA-MVGRASLMSDVFSFGVVLLELITGRQPIHR 438 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~-~~~~~s~ksDVwSlGvil~eLltG~~P~~~ 438 (535)
........++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 153 ----~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 ----AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ----cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 0122344677889999988 667788899999999999999999999954
No 399
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.94 E-value=5.2e-28 Score=224.34 Aligned_cols=279 Identities=23% Similarity=0.345 Sum_probs=208.6
Q ss_pred cccccccccCCcccccCceeeeCHHHHHHHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCC-CCChhHHHHHH
Q 009404 194 CFLKTTFCRSKTWTIHGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQG-GPNADSVFLTE 272 (535)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~-~~~~~~~~~~E 272 (535)
.|..+.+...+..+..+++.+|+--+.. +.....+|.+...|+.|+|+|+ |..+++|+++... +.....+|.+|
T Consensus 163 pfkdt~wkgtktr~rdatlsr~~gid~~----~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfnee 237 (448)
T KOG0195|consen 163 PFKDTTWKGTKTRTRDATLSRYTGIDVS----SLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEE 237 (448)
T ss_pred cccccccccccccccccccccccCcchh----hhhhhhhhccCCCccccccccc-Ccchhhhhhhhhhcchhhcchhhhh
Confidence 3444444445555555555555433322 1223456888999999999997 5668888887543 23334569999
Q ss_pred HHHHhccCCCCccceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 009404 273 VDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRI 352 (535)
Q Consensus 273 i~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 352 (535)
.-.|+.+.||||++++|.|... ..+.++..||+.|+|+..|++...-..+..++++++.++|+||+|||+.. |-|
T Consensus 238 fp~lrifshpnilpvlgacnsp----pnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~i 312 (448)
T KOG0195|consen 238 FPALRIFSHPNILPVLGACNSP----PNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMI 312 (448)
T ss_pred CcceeeecCCchhhhhhhccCC----CCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhh
Confidence 9999999999999999999873 45689999999999999999866556888999999999999999999985 446
Q ss_pred eecCCCCCCEEeCCCCcEEEE--ecCCccccccCCCCCCCCCCCccccCccccCccccccCCC---CccchHHHHHHHHH
Q 009404 353 LHRDIKSSNILLDENLNAKIT--DLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRA---SLMSDVFSFGVVLL 427 (535)
Q Consensus 353 ~H~DLk~~NILl~~~~~vkL~--DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---s~ksDVwSlGvil~ 427 (535)
.-..|.+..+++|++.+++|+ |--++. ......-.+.||+||.++..+- -...|+|||++++|
T Consensus 313 pr~~lns~hvmidedltarismad~kfsf------------qe~gr~y~pawmspealqrkped~n~raadmwsfaillw 380 (448)
T KOG0195|consen 313 PRFYLNSKHVMIDEDLTARISMADTKFSF------------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLW 380 (448)
T ss_pred hhhhcccceEEecchhhhheecccceeee------------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHH
Confidence 677899999999999998875 211111 1111223578999999876543 45789999999999
Q ss_pred HHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 428 ELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 428 eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
||.|...||....+-+-. -++.-+.++...|+..+..|.+|+.-|++.||.+||.++.|+-.|
T Consensus 381 el~trevpfadlspmecg-----------------mkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpil 443 (448)
T KOG0195|consen 381 ELNTREVPFADLSPMECG-----------------MKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPIL 443 (448)
T ss_pred HhhccccccccCCchhhh-----------------hhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhH
Confidence 999999999654432110 112223344566777788899999999999999999999999999
Q ss_pred hhhC
Q 009404 508 STIA 511 (535)
Q Consensus 508 ~~l~ 511 (535)
+++.
T Consensus 444 ekm~ 447 (448)
T KOG0195|consen 444 EKMI 447 (448)
T ss_pred HHhc
Confidence 8763
No 400
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=7e-28 Score=240.71 Aligned_cols=210 Identities=25% Similarity=0.283 Sum_probs=172.9
Q ss_pred eeCHHHHHHHhcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccC------CCCccc
Q 009404 214 RFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH------HCHVVP 286 (535)
Q Consensus 214 ~~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~------H~niv~ 286 (535)
.|.+.--|....+|.+....|+|-|++|.+|.+.. |+.||||++...... .+.=+.|+++|++|+ --|.++
T Consensus 421 YYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M--~KtGl~EleiLkKL~~AD~Edk~Hclr 498 (752)
T KOG0670|consen 421 YYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM--HKTGLKELEILKKLNDADPEDKFHCLR 498 (752)
T ss_pred eEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH--hhhhhHHHHHHHHhhccCchhhhHHHH
Confidence 35555566778899999999999999999998764 889999999865322 222468999999994 237888
Q ss_pred eeeeeeecccCcceEEEEEecCCCCCHHHhhhhccc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 009404 287 LVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLV-EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD 365 (535)
Q Consensus 287 l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~ 365 (535)
++-.|.. ..+++||||-+ ..+|.++|..... -+|....+..++.|+.-||..|...+ |+|.||||.||||+
T Consensus 499 l~r~F~h----knHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVN 570 (752)
T KOG0670|consen 499 LFRHFKH----KNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVN 570 (752)
T ss_pred HHHHhhh----cceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEec
Confidence 8877765 66889999988 5699999987542 34888899999999999999999998 99999999999998
Q ss_pred CCC-cEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCcc
Q 009404 366 ENL-NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSI 440 (535)
Q Consensus 366 ~~~-~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~ 440 (535)
+.. .+||+|||.|.....+.. +....+..|.|||++.+.+|+...|+||.||.||||.||+..|....
T Consensus 571 E~k~iLKLCDfGSA~~~~enei-------tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~T 639 (752)
T KOG0670|consen 571 ESKNILKLCDFGSASFASENEI-------TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRT 639 (752)
T ss_pred cCcceeeeccCccccccccccc-------cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCC
Confidence 755 479999999987765432 22334567999999999999999999999999999999998886543
No 401
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=1.4e-27 Score=226.73 Aligned_cols=267 Identities=23% Similarity=0.292 Sum_probs=190.9
Q ss_pred cCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCC-CCChhHHHHHHHHHHhccCCCCccceeeeeeecc--cCcce
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFR--GKRAM 300 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--~~~~~ 300 (535)
.+|..++.+|.|.- .|-.+.+. .+++||+|++...- .....+...+|..+|..++|+||++++.++.-.. .....
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 34556677888888 55555432 38899999886441 1222234678999999999999999999986422 12235
Q ss_pred EEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 301 RLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 301 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.|+|||+| ..+|..++. ..++..++..|..|++.|++|||+.+ |+||||||+||++..+..+||.|||+|+.
T Consensus 96 ~y~v~e~m-~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVIL----MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHHHHHhh-hhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhcc
Confidence 69999999 569998876 34788899999999999999999999 99999999999999999999999999986
Q ss_pred cccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccch--------------
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEES-------------- 446 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~-------------- 446 (535)
-..+ ...+..+.|..|.|||++.+..+...+||||.||++.||++|+.-|.+......-.
T Consensus 168 e~~~------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~ 241 (369)
T KOG0665|consen 168 EDTD------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFM 241 (369)
T ss_pred cCcc------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHH
Confidence 5443 23455678889999999998889999999999999999999987765322110000
Q ss_pred ------hhhhccccccCccccccc-CCCCCCCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 447 ------LVLWATPRLQDSGTVISE-LPDPRLKG--DFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 447 ------~~~~~~~~~~~~~~~~~~-~~~~~l~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
...+....-+.......+ ++|..+.. +.+.-......+++.+||-.||++|.+++++|.+
T Consensus 242 ~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 242 KQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 000000000000011111 11211111 1111223457889999999999999999999985
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-27 Score=220.68 Aligned_cols=259 Identities=18% Similarity=0.312 Sum_probs=186.9
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcc
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 299 (535)
...+.|.+.+.||+|.||.+-+++++. ++.+++|.+.... ....+|.+|...--.| .|.||+.-+++.-+.. .
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~--tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~---d 95 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ--TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTS---D 95 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch--hhHHHHHHHhccceeeccchhhhHHHHHHhhcC---c
Confidence 345678999999999999999999875 7789999987654 3345699998765556 7999998887654432 3
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC--CCCcEEEEecCC
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD--ENLNAKITDLGM 377 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~--~~~~vkL~DFGl 377 (535)
..++++||+|.|+|.+-+.. .++.+.....++.|++.|+.|+|+++ ++|||||.+||||- +...+||+|||+
T Consensus 96 ~YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~ 169 (378)
T KOG1345|consen 96 AYVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGL 169 (378)
T ss_pred eEEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeeccc
Confidence 66889999999999987754 56888899999999999999999998 99999999999992 445799999999
Q ss_pred ccccccCCCCCCCCCCCccccCccccCcccccc---CC--CCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcc
Q 009404 378 AKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV---GR--ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWAT 452 (535)
Q Consensus 378 a~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~--~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~ 452 (535)
.+..+.. .....-+..|.+||.... +. ..+.+|||.||++++.++||..||+....... .-..|..
T Consensus 170 t~k~g~t--------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~-~Y~~~~~ 240 (378)
T KOG1345|consen 170 TRKVGTT--------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDK-PYWEWEQ 240 (378)
T ss_pred ccccCce--------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCc-hHHHHHH
Confidence 8765432 222334567999997642 22 46789999999999999999999984433221 1111111
Q ss_pred ccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhh
Q 009404 453 PRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTI 510 (535)
Q Consensus 453 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l 510 (535)
++... .. .-|..-..+. ..+..+.++-+..++++|--..++.+.....
T Consensus 241 --w~~rk--~~--~~P~~F~~fs----~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~ 288 (378)
T KOG1345|consen 241 --WLKRK--NP--ALPKKFNPFS----EKALRLFKKSLTPRFKDRCKIWTAKKMRKCL 288 (378)
T ss_pred --Hhccc--Cc--cCchhhcccC----HHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence 11110 00 1111122233 3366788889999999996555555544433
No 403
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=5.8e-28 Score=247.88 Aligned_cols=253 Identities=26% Similarity=0.401 Sum_probs=198.8
Q ss_pred hcCCCCCcccceeCceEEEEEEEc-CCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
.++|...+.+|.|.+|.|||+++. .++..|||+++-..... ......|+-+++..+||||+.++|.+.. +...+
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd-~~~iqqei~~~~dc~h~nivay~gsylr----~dklw 88 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD-FSGIQQEIGMLRDCRHPNIVAYFGSYLR----RDKLW 88 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc-ccccccceeeeecCCCcChHHHHhhhhh----hcCcE
Confidence 456778899999999999999975 48999999998664322 2336789999999999999999998876 44569
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+.|||+.+|+|.+.-+.. ..+++.++..+++...+||+|||+++ -+|||||-.|||+++.+.+|++|||.+..+.
T Consensus 89 icMEycgggslQdiy~~T--gplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqit 163 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQIT 163 (829)
T ss_pred EEEEecCCCcccceeeec--ccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhh
Confidence 999999999999977643 56899999999999999999999998 7999999999999999999999999987765
Q ss_pred cCCCCCCCCCCCccccCccccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAM---VGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSG 459 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 459 (535)
.. ......+.||+.|||||+.. .+-|..++|||+.|+...||-.-++|.....+.. .+.....
T Consensus 164 at-----i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr--~l~LmTk------- 229 (829)
T KOG0576|consen 164 AT-----IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR--ALFLMTK------- 229 (829)
T ss_pred hh-----hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH--HHHHhhc-------
Confidence 43 33456688999999999874 5668999999999999999988777754332211 1111000
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 460 TVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
.-...+.+.. +..-.+.+.++++.++-++|.+|||++.+++
T Consensus 230 ---S~~qpp~lkD--k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 230 ---SGFQPPTLKD--KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ---cCCCCCcccC--CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 0111122211 2233456899999999999999999988775
No 404
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.93 E-value=1.6e-26 Score=227.31 Aligned_cols=272 Identities=25% Similarity=0.392 Sum_probs=196.0
Q ss_pred HHHHhcCCCCCcccceeCceEEEEEEEc----CCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeec
Q 009404 220 LEHATDKFSGSNIVGQGGSSYVYRGQLT----DGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEF 294 (535)
Q Consensus 220 l~~~~~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~ 294 (535)
+....+.|...++||+|.|++||++++. ..+.||+|.+.....+. ....|+++|..+ -+.||+++.+++..
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~---ri~~El~~L~~~gG~~ni~~~~~~~rn- 106 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPS---RILNELEMLYRLGGSDNIIKLNGCFRN- 106 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCch---HHHHHHHHHHHhccchhhhcchhhhcc-
Confidence 3445567888999999999999999864 36789999998655433 478999999999 69999999998875
Q ss_pred ccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC-CCCcEEEE
Q 009404 295 RGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD-ENLNAKIT 373 (535)
Q Consensus 295 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~-~~~~vkL~ 373 (535)
+....+|+||++...-.+++.. ++...+..++..+..||+++|.+| |+||||||+|+|.+ ..+.-.|.
T Consensus 107 ---nd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~Lv 175 (418)
T KOG1167|consen 107 ---NDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLV 175 (418)
T ss_pred ---CCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEE
Confidence 4567999999999999988754 678899999999999999999999 99999999999997 45567899
Q ss_pred ecCCccccccCC-------------CC---------------------C-----CCCCCCccccCccccCcccccc-CCC
Q 009404 374 DLGMAKRLKADG-------------LP---------------------S-----CSSSPARMQGTFGYFAPEYAMV-GRA 413 (535)
Q Consensus 374 DFGla~~~~~~~-------------~~---------------------~-----~~~~~~~~~gt~~y~aPE~~~~-~~~ 413 (535)
|||+|....... .+ . .........||++|.|||++.. ...
T Consensus 176 DFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Q 255 (418)
T KOG1167|consen 176 DFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQ 255 (418)
T ss_pred echhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCc
Confidence 999998221100 00 0 0001123569999999999864 567
Q ss_pred CccchHHHHHHHHHHHHhCCCCCCCccccccchh---------------------hhhccccc---cCcccccccC----
Q 009404 414 SLMSDVFSFGVVLLELITGRQPIHRSITKGEESL---------------------VLWATPRL---QDSGTVISEL---- 465 (535)
Q Consensus 414 s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~---------------------~~~~~~~~---~~~~~~~~~~---- 465 (535)
+.+.||||-|||++-+++++.||.......+.-. ..|..... .+.......+
T Consensus 256 ttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~ 335 (418)
T KOG1167|consen 256 TTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIES 335 (418)
T ss_pred CCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhh
Confidence 8999999999999999999999976544321000 01110000 0000000001
Q ss_pred CCC--C--C-CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 466 PDP--R--L-KGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 466 ~~~--~--l-~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
..+ . . .....+..+..+.+++.+|+..||.+|.|+++.|++
T Consensus 336 ~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 336 IYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 000 0 0 001112224468999999999999999999999874
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=2.1e-26 Score=260.46 Aligned_cols=204 Identities=19% Similarity=0.182 Sum_probs=139.0
Q ss_pred ccCC-CCccceeeeeeecc---cCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 009404 278 RLHH-CHVVPLVGYCSEFR---GKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRIL 353 (535)
Q Consensus 278 ~l~H-~niv~l~g~~~~~~---~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~ 353 (535)
.++| +||+++++++.... ......++++||+ +++|.++|+.. ...+++.+++.++.||++||.|||+++ |+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~g---Iv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQG---IV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence 4445 57888888773222 1123457788988 66999999753 345999999999999999999999998 99
Q ss_pred ecCCCCCCEEeCCCCc-------------------EEEEecCCccccccCCC-----------CCCCCCCCccccCcccc
Q 009404 354 HRDIKSSNILLDENLN-------------------AKITDLGMAKRLKADGL-----------PSCSSSPARMQGTFGYF 403 (535)
Q Consensus 354 H~DLk~~NILl~~~~~-------------------vkL~DFGla~~~~~~~~-----------~~~~~~~~~~~gt~~y~ 403 (535)
||||||+||||+..+. +|++|||+++....... ...........||+.|+
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999965444 55555555543211000 00000111245889999
Q ss_pred CccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHH
Q 009404 404 APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMA 483 (535)
Q Consensus 404 aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 483 (535)
|||++.+..++.++|||||||+||||++|..|+..... ...... .....+... .......
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----~~~~~~-----------~~~~~~~~~-----~~~~~~~ 242 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----TMSSLR-----------HRVLPPQIL-----LNWPKEA 242 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----HHHHHH-----------HhhcChhhh-----hcCHHHH
Confidence 99999999999999999999999999998887642110 000000 001111110 1122356
Q ss_pred HHHHHhcccCCCCCCCHHHHHHH
Q 009404 484 YLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 484 ~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+++.+||+.+|.+||++.|++++
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhhc
Confidence 78889999999999999999874
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=4.3e-25 Score=203.67 Aligned_cols=168 Identities=20% Similarity=0.192 Sum_probs=126.9
Q ss_pred CCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCCC
Q 009404 311 GNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCS 390 (535)
Q Consensus 311 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 390 (535)
|+|.++++.. ...+++.+++.|+.|++.||+|||+++ ||+|||++.++.+|+ ||++.......
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~----- 63 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ----- 63 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc-----
Confidence 7899999753 356999999999999999999999885 999999999999999 99987654321
Q ss_pred CCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCCC
Q 009404 391 SSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRL 470 (535)
Q Consensus 391 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 470 (535)
..||+.|+|||++.+..++.++||||||+++|||++|+.||........ ........ ..... +.
T Consensus 64 -----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~-~~~~~~~~--------~~~~~-~~- 127 (176)
T smart00750 64 -----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA-ILEILLNG--------MPADD-PR- 127 (176)
T ss_pred -----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH-HHHHHHHH--------hccCC-cc-
Confidence 2578999999999999999999999999999999999999864322111 00000000 00000 00
Q ss_pred CCCCCHHHHH--HHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 471 KGDFPKEEMQ--IMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 471 ~~~~~~~~~~--~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
....+..... .+.+++.+||+.+|++||++.|+++++..+.
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 128 DRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred ccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 0011223333 5899999999999999999999999987764
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=2.3e-24 Score=218.49 Aligned_cols=281 Identities=21% Similarity=0.274 Sum_probs=203.4
Q ss_pred CCCCCcccceeCceEEEEEEEcCC--cEEEEEEeccCCCCChhHHHHHHHHHHhccCC----CCccceeeeeeecccCcc
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTDG--RIVAVKRFKTQGGPNADSVFLTEVDMLSRLHH----CHVVPLVGYCSEFRGKRA 299 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~g--~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H----~niv~l~g~~~~~~~~~~ 299 (535)
+|.+.+.||+|+||.||++...+. ..+|+|........... .+..|..++..+.. +++..+++... ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~---~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGR---STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEecc---CCCc
Confidence 688899999999999999997653 57999988765433322 47788888888863 57888887763 1244
Q ss_pred eEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-----CcEEEEe
Q 009404 300 MRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN-----LNAKITD 374 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~-----~~vkL~D 374 (535)
..++||+.+ |.+|.++......+.++..+.+.|+.|++.+|++||+.| ++||||||.|+++... ..+.|.|
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEe
Confidence 679999988 789999886655577999999999999999999999999 9999999999999754 4699999
Q ss_pred cCCccccc--cCCCC--CCCCC-CCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhh
Q 009404 375 LGMAKRLK--ADGLP--SCSSS-PARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVL 449 (535)
Q Consensus 375 FGla~~~~--~~~~~--~~~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~ 449 (535)
||+++... ..... ..... ...+.||..|.+++...+...+.+.|+||++.++.|++.|..||.............
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~ 250 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFE 250 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHH
Confidence 99998332 22211 11111 345679999999999999999999999999999999999999996543221111000
Q ss_pred hccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcccccCCCCCccCccc
Q 009404 450 WATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKSRRRNISLNLFQPVA 529 (535)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~~~~~~~~~~~~~~~ 529 (535)
... ....... +....| ..+.+++..+-..+...+|....+...|........ .....+.+
T Consensus 251 ~~~---------~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~------~~~~~~~d 310 (322)
T KOG1164|consen 251 KDP---------RKLLTDR-FGDLKP----EEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEG------SKEDSPFD 310 (322)
T ss_pred HHh---------hhhcccc-ccCCCh----HHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcC------CCCCCCCc
Confidence 000 0000000 111122 335555555556899999999999999888765542 22227777
Q ss_pred cccCC
Q 009404 530 WRRNH 534 (535)
Q Consensus 530 ~~~~~ 534 (535)
|..+.
T Consensus 311 w~~~~ 315 (322)
T KOG1164|consen 311 WEVKL 315 (322)
T ss_pred ccccc
Confidence 87653
No 408
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=1.4e-23 Score=200.15 Aligned_cols=265 Identities=20% Similarity=0.263 Sum_probs=199.8
Q ss_pred CCCCCcccceeCceEEEEEE-EcCCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQ-LTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~-~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
.|.+.++||+|+||..+.|+ +-++++||||.-..... ...+.-|....+.| ..++|...+-+-.+ +.+-.|
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~---APQLrdEYr~YKlL~g~~GIP~vYYFGqe----G~~NiL 101 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE---APQLRDEYRTYKLLGGTEGIPQVYYFGQE----GKYNIL 101 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCC---cchHHHHHHHHHHHcCCCCCCceeeeccc----cchhhh
Confidence 57889999999999999997 45799999998765432 23367788888888 56788887755443 345589
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-----CCcEEEEecCCc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE-----NLNAKITDLGMA 378 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~-----~~~vkL~DFGla 378 (535)
|+|.+ |-||+|+++-. +..++..+.+.+|.|++.-++|+|++. +|.|||||+|+||.. ...+.|+|||+|
T Consensus 102 VidLL-GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 102 VIDLL-GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhhh-CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccch
Confidence 99998 78999988653 466999999999999999999999998 999999999999963 335899999999
Q ss_pred cccccCCC--CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccccc
Q 009404 379 KRLKADGL--PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 379 ~~~~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
+...+... ...........||.+||+-....+.+.+.+.|+-|||-+++..|.|..||+.......... ++
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~k-------Ye 249 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEK-------YE 249 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHH-------HH
Confidence 98866443 2233445667899999999999999999999999999999999999999987544322211 11
Q ss_pred CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCC
Q 009404 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPD 513 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~ 513 (535)
..+...+...-..+...+|.+ +..-+...-..+-++-|..+-+...+..+...
T Consensus 250 KIGe~Kr~T~i~~Lc~g~P~e----fa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 250 KIGETKRSTPIEVLCEGFPEE----FATYLRYVRRLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred HhccccccCCHHHHHhcCHHH----HHHHHHHHHhcCcccCCCHHHHHHHHHHHHHh
Confidence 112212222223344445555 45555555567888889998888877777543
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=6.8e-24 Score=215.21 Aligned_cols=172 Identities=22% Similarity=0.207 Sum_probs=130.8
Q ss_pred HHHhcCCCCCcccceeCceEEEEEEEc--CCcEEEEEEeccCC----CCChhHHHHHHHHHHhccCCCCccceeeeeeec
Q 009404 221 EHATDKFSGSNIVGQGGSSYVYRGQLT--DGRIVAVKRFKTQG----GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEF 294 (535)
Q Consensus 221 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~--~g~~vaVK~l~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~ 294 (535)
....++|...+.||+|+||+||+|.+. +++.||||++.... .......|.+|+++|+.++|+|+++.+...
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 345577889999999999999999875 47888999876331 122345589999999999999998633211
Q ss_pred ccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCEEeCCCCcEEEE
Q 009404 295 RGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDI-KSSNILLDENLNAKIT 373 (535)
Q Consensus 295 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DL-k~~NILl~~~~~vkL~ 373 (535)
...++||||+++++|... .. .. ...++.+++++|.|||+.+ |+|||| ||+|||++.++.+||+
T Consensus 91 ----~~~~LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLi 154 (365)
T PRK09188 91 ----GKDGLVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVI 154 (365)
T ss_pred ----CCcEEEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEE
Confidence 135999999999999732 11 11 1467889999999999998 999999 9999999999999999
Q ss_pred ecCCccccccCCCCCC---CCCCCccccCccccCccccccC
Q 009404 374 DLGMAKRLKADGLPSC---SSSPARMQGTFGYFAPEYAMVG 411 (535)
Q Consensus 374 DFGla~~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~ 411 (535)
|||+++.+........ ........+++.|+|||++...
T Consensus 155 DFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 155 DFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9999998765432111 1122456788999999988643
No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=1.1e-22 Score=186.12 Aligned_cols=265 Identities=21% Similarity=0.260 Sum_probs=195.4
Q ss_pred hcCCCCCcccceeCceEEEEEEE-cCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCC-CCccceeeeeeecccCcceE
Q 009404 224 TDKFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHH-CHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 224 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H-~niv~l~g~~~~~~~~~~~~ 301 (535)
..+|...++||.|+||.+|.|.. .+|+.||||+-...... ..+..|..+.+.|++ ..|..+..|..+ ..+-
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h---pqL~yEskvY~iL~~g~GiP~i~~y~~e----~~yn 86 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH---PQLLYESKVYRILQGGVGIPHIRHYGTE----KDYN 86 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC---cchhHHHHHHHHhccCCCCchhhhhccc----cccc
Confidence 46788899999999999999974 57999999998765432 236789999999965 567777766665 3455
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC---CcEEEEecCCc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN---LNAKITDLGMA 378 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~---~~vkL~DFGla 378 (535)
.+||+.. |.+|.+.+.-. ...++..+.+.++-|++.-++|+|.++ ++||||||+|+|..-+ ..+.++|||+|
T Consensus 87 vlVMdLL-GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLa 161 (341)
T KOG1163|consen 87 VLVMDLL-GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLA 161 (341)
T ss_pred eeeeecc-CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccch
Confidence 8999998 77999887543 355889999999999999999999999 9999999999999643 45899999999
Q ss_pred cccccCCC--CCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccccc
Q 009404 379 KRLKADGL--PSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 379 ~~~~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
+...+... ...........||.+|.+-....+...+.+.|+-|+|.+|..+..|..||+.............. .
T Consensus 162 Kky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI----~ 237 (341)
T KOG1163|consen 162 KKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKI----S 237 (341)
T ss_pred hhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHH----H
Confidence 98755322 22233445678999999988888888899999999999999999999999875443222111100 0
Q ss_pred CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhC
Q 009404 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIA 511 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~ 511 (535)
+ .....+...+...+|.+ +.-.+..|-..--++-|+...+-+.+..+.
T Consensus 238 E---kK~s~~ie~LC~G~P~E----F~myl~Y~R~L~F~E~Pdy~ylrqlFriLf 285 (341)
T KOG1163|consen 238 E---KKMSTPIEVLCKGFPAE----FAMYLNYCRGLGFEEKPDYMYLRQLFRILF 285 (341)
T ss_pred H---hhcCCCHHHHhCCCcHH----HHHHHHHHhhcCCCCCCcHHHHHHHHHHHH
Confidence 0 00112223344455555 455566677777777787777766665553
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=2e-21 Score=194.50 Aligned_cols=262 Identities=29% Similarity=0.413 Sum_probs=195.9
Q ss_pred CCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCC--hhHHHHHHHHHHhccCCC-CccceeeeeeecccCcceEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPN--ADSVFLTEVDMLSRLHHC-HVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~--~~~~~~~Ei~~l~~l~H~-niv~l~g~~~~~~~~~~~~~l 303 (535)
|...+.||.|+||.||++... ..+++|.+....... ....+.+|+.++..+.|+ +++++.+++.. ....++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~----~~~~~~ 75 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD----EGSLYL 75 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec----CCEEEE
Confidence 556678999999999999986 789999998765544 356799999999999888 79999998843 233699
Q ss_pred EEecCCCCCHHHhhhhccc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-cEEEEecCCcccc
Q 009404 304 VFEFMPNGNLRDCLDGVLV-EGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL-NAKITDLGMAKRL 381 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~-~vkL~DFGla~~~ 381 (535)
+++|+.+++|.+++..... ..+.......+..|++.++.|+|+.+ ++|||+||+||+++... .++++|||.+...
T Consensus 76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~ 152 (384)
T COG0515 76 VMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLL 152 (384)
T ss_pred EEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceec
Confidence 9999999999977765321 25889999999999999999999998 99999999999999988 7999999999865
Q ss_pred ccCCCCCCC-CCCCccccCccccCcccccc---CCCCccchHHHHHHHHHHHHhCCCCCCCcccc---ccchhhhhcccc
Q 009404 382 KADGLPSCS-SSPARMQGTFGYFAPEYAMV---GRASLMSDVFSFGVVLLELITGRQPIHRSITK---GEESLVLWATPR 454 (535)
Q Consensus 382 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~---~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~---~~~~~~~~~~~~ 454 (535)
......... .......|+..|+|||.+.. ...+...|+|++|++++++++|..||...... .......+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 232 (384)
T COG0515 153 PDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPT 232 (384)
T ss_pred CCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCC
Confidence 543221110 13456789999999999987 57899999999999999999999997544321 000000000000
Q ss_pred ccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 455 LQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 455 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
. ..........+......+.+++..++..+|..|.+..+....
T Consensus 233 --~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 233 --P-------SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred --c-------ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0 000000000012223457889999999999999999987764
No 412
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.86 E-value=1.8e-22 Score=217.69 Aligned_cols=252 Identities=22% Similarity=0.229 Sum_probs=178.9
Q ss_pred CCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHH--HhccCCCCccceeeeeeecccCcceEEE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDM--LSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~--l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
++...+.||++.|=+|.+++++.|. |+||++-.....-....|.++++- ...++|||.+++..+-.. ....||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t----~kAAyl 98 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVT----DKAAYL 98 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHh----hHHHHH
Confidence 5667788999999999999998887 999999766544333445544433 445599999998866443 345578
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc--
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL-- 381 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~-- 381 (535)
|-+|. ..+|+|.|.-+ .-+...+...|+.|++.||...|..+ |+|||||.+||||+.-.-+.|+||..-+..
T Consensus 99 vRqyv-khnLyDRlSTR--PFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYL 172 (1431)
T KOG1240|consen 99 VRQYV-KHNLYDRLSTR--PFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYL 172 (1431)
T ss_pred HHHHH-hhhhhhhhccc--hHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccC
Confidence 88888 45899888542 33677788999999999999999999 999999999999999999999999765422
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccC----------C-CCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhh
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVG----------R-ASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVL 449 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~ 449 (535)
+.+..........+...-..|.|||.+... . .+++.||||+||++.||++ |++||..+ ++..
T Consensus 173 PeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS------QL~a 246 (1431)
T KOG1240|consen 173 PEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS------QLLA 246 (1431)
T ss_pred CCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH------HHHh
Confidence 222211111111111223469999987531 2 6788999999999999999 67777421 1111
Q ss_pred hccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 450 WATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
+......+....++++.|+ .++.++..|++.||++|.++++.++.
T Consensus 247 Yr~~~~~~~e~~Le~Ied~------------~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 247 YRSGNADDPEQLLEKIEDV------------SLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HhccCccCHHHHHHhCcCc------------cHHHHHHHHHccCchhccCHHHHHHh
Confidence 1111111122233344443 27789999999999999999999986
No 413
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=4.6e-22 Score=214.66 Aligned_cols=257 Identities=21% Similarity=0.236 Sum_probs=182.8
Q ss_pred CCcccceeCceEEEEEEEc-CCcEEEEEEecc-----CCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEE
Q 009404 229 GSNIVGQGGSSYVYRGQLT-DGRIVAVKRFKT-----QGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 229 ~~~~LG~G~fG~Vy~~~~~-~g~~vaVK~l~~-----~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
..+++|.|++|.|+..... .....+.|.... .........+..|+-+-..++|+|++..+..+.+.... +
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~----~ 397 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGI----L 397 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccc----h
Confidence 4578999999988777643 234344443321 11111111255677777888999998877766553322 3
Q ss_pred EEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 303 LVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 303 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
-+|||+++ +|..++... ..+....+..++.|+..|++|+|+.| |.|||||++|++++.++.+||+|||.+..+.
T Consensus 398 ~~mE~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 398 QSMEYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFR 471 (601)
T ss_pred hhhhcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeec
Confidence 34999999 999998653 35888899999999999999999999 9999999999999999999999999998775
Q ss_pred cCCCCCCCCCCCccccCccccCccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccc
Q 009404 383 ADGLPSCSSSPARMQGTFGYFAPEYAMVGRAS-LMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTV 461 (535)
Q Consensus 383 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (535)
...... ........|+..|+|||.+....|. ...||||.|+++..|.+|+.||............. . .
T Consensus 472 ~~~e~~-~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~-~---------~ 540 (601)
T KOG0590|consen 472 YPWEKN-IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTN-N---------Y 540 (601)
T ss_pred cCcchh-hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhh-c---------c
Confidence 543211 1334567899999999999988885 46799999999999999999997554332211000 0 0
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009404 462 ISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQI 506 (535)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 506 (535)
........-........+.....++.++|+.||.+|.|+++|++.
T Consensus 541 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 541 SDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred ccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 000000000111123345567889999999999999999999974
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.84 E-value=9.5e-21 Score=176.72 Aligned_cols=140 Identities=16% Similarity=0.170 Sum_probs=108.2
Q ss_pred CcccceeCceEEEEEEEcCCcEEEEEEeccCCCCC-h-------h-----------------HHHHHHHHHHhccCCCCc
Q 009404 230 SNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPN-A-------D-----------------SVFLTEVDMLSRLHHCHV 284 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~-~-------~-----------------~~~~~Ei~~l~~l~H~ni 284 (535)
...||+|+||.||+|...+|+.||||+++...... . . .....|++.+..+.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 36799999999999998889999999997542111 1 0 112349999999988877
Q ss_pred cceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeeecCCCCCCEE
Q 009404 285 VPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYL-HEAAAPRILHRDIKSSNIL 363 (535)
Q Consensus 285 v~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~~~~~i~H~DLk~~NIL 363 (535)
.....+... ..+|||||++++++...+.. ...+++.....++.|++.+|.+| |+.+ |+||||||+|||
T Consensus 82 ~~p~~~~~~------~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIl 150 (190)
T cd05147 82 PCPEPILLK------SHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLL 150 (190)
T ss_pred CCCcEEEec------CCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEE
Confidence 543332111 12899999998877654322 24588999999999999999999 6888 999999999999
Q ss_pred eCCCCcEEEEecCCcccc
Q 009404 364 LDENLNAKITDLGMAKRL 381 (535)
Q Consensus 364 l~~~~~vkL~DFGla~~~ 381 (535)
+++ +.++|+|||++...
T Consensus 151 i~~-~~v~LiDFG~a~~~ 167 (190)
T cd05147 151 YHD-GKLYIIDVSQSVEH 167 (190)
T ss_pred EEC-CcEEEEEccccccC
Confidence 984 68999999999754
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=7.5e-21 Score=179.89 Aligned_cols=178 Identities=12% Similarity=0.127 Sum_probs=136.2
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChh--HH------HHHHHHHHhccCCCCccceeeeeee
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNAD--SV------FLTEVDMLSRLHHCHVVPLVGYCSE 293 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~--~~------~~~Ei~~l~~l~H~niv~l~g~~~~ 293 (535)
...++|...++||.|+||.||+... ++..+|||.+......... .. +.+|+..+.++.|++|..+..++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 4568999999999999999999766 5778999999765322221 12 5789999999999999999988664
Q ss_pred cccC----cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc
Q 009404 294 FRGK----RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLN 369 (535)
Q Consensus 294 ~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~ 369 (535)
.... ....+++|||++|.+|.++.. ++. ....+++.+|..+|+.+ ++|||++|+||+++.++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-
Confidence 3211 234689999999999988732 222 24569999999999998 99999999999999988
Q ss_pred EEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh
Q 009404 370 AKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT 431 (535)
Q Consensus 370 vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt 431 (535)
++|+|||.......+.. ...++....+..++|+|+||+++..+..
T Consensus 173 i~liDfg~~~~~~e~~a-----------------~d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKA-----------------KDRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred EEEEECCCcccccchhh-----------------HHHHHHHhHhcccccccceeEeehHHHH
Confidence 99999998865432210 0113445556779999999999886653
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.83 E-value=1e-19 Score=170.18 Aligned_cols=140 Identities=22% Similarity=0.226 Sum_probs=110.5
Q ss_pred CcccceeCceEEEEEEEcCCcEEEEEEeccCCCCC---------------------h----hHHHHHHHHHHhccCCCCc
Q 009404 230 SNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPN---------------------A----DSVFLTEVDMLSRLHHCHV 284 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~---------------------~----~~~~~~Ei~~l~~l~H~ni 284 (535)
.+.||+|+||.||+|...+|+.||||+++...... . ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46799999999999998789999999998652110 0 1113578899999999987
Q ss_pred cceeeeeeecccCcceEEEEEecCCCCCHHHh-hhhcccCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCE
Q 009404 285 VPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDC-LDGVLVEGMNWDTRVAIAIGAARGLEYLHE-AAAPRILHRDIKSSNI 362 (535)
Q Consensus 285 v~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~i~H~DLk~~NI 362 (535)
.....+... ..++||||++++++... +.. ..++......++.|++.+|.+||+ .+ |+||||||+||
T Consensus 82 ~~p~~~~~~------~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NI 149 (190)
T cd05145 82 PVPEPILLK------KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNI 149 (190)
T ss_pred CCceEEEec------CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhE
Confidence 554443322 13899999988855433 332 347788899999999999999999 88 99999999999
Q ss_pred EeCCCCcEEEEecCCccccc
Q 009404 363 LLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 363 Ll~~~~~vkL~DFGla~~~~ 382 (535)
|++ ++.++|+|||++....
T Consensus 150 ll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 150 LYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred EEE-CCCEEEEEcccceecC
Confidence 999 7899999999998654
No 417
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=9.4e-20 Score=177.83 Aligned_cols=202 Identities=23% Similarity=0.267 Sum_probs=141.0
Q ss_pred CCCCccceeeeeeec-----------------------ccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHH
Q 009404 280 HHCHVVPLVGYCSEF-----------------------RGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336 (535)
Q Consensus 280 ~H~niv~l~g~~~~~-----------------------~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 336 (535)
+|||||++.++|.++ -+....+|+||.-++ .+|.++|.. ...+......|+.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~---~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT---RHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc---CCCchHHHHHHHHH
Confidence 599999999887552 123346789998884 599999975 34566778889999
Q ss_pred HHHHHHHHHhcCCCCeeecCCCCCCEEe--CCCC--cEEEEecCCccccccCCCCCCC-CCCCccccCccccCccccccC
Q 009404 337 AARGLEYLHEAAAPRILHRDIKSSNILL--DENL--NAKITDLGMAKRLKADGLPSCS-SSPARMQGTFGYFAPEYAMVG 411 (535)
Q Consensus 337 ia~~L~~LH~~~~~~i~H~DLk~~NILl--~~~~--~vkL~DFGla~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~ 411 (535)
+++|+.|||.++ |.|||||++|||| |+|. ...|+|||++---...+..... ...-..-|...-||||+....
T Consensus 350 lLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 999999999999 9999999999999 3333 4789999987543332211111 112234467789999987643
Q ss_pred C------CCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHH
Q 009404 412 R------ASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYL 485 (535)
Q Consensus 412 ~------~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l 485 (535)
+ .-.|+|.|+.|.+.||+++...||+... +..+.. ..+++-.-|. .|..++..+.++
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG---em~L~~----------r~Yqe~qLPa----lp~~vpp~~rql 489 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG---EMLLDT----------RTYQESQLPA----LPSRVPPVARQL 489 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccc---hheech----------hhhhhhhCCC----CcccCChHHHHH
Confidence 2 2458999999999999999999997521 111000 1122222233 344555568889
Q ss_pred HHHhcccCCCCCCCHHHHHH
Q 009404 486 AKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 486 i~~cl~~dP~~RPt~~evl~ 505 (535)
+...|+.||++|++..-...
T Consensus 490 V~~lL~r~pskRvsp~iAAN 509 (598)
T KOG4158|consen 490 VFDLLKRDPSKRVSPNIAAN 509 (598)
T ss_pred HHHHhcCCccccCCccHHHh
Confidence 99999999999998664443
No 418
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.81 E-value=8.5e-20 Score=188.66 Aligned_cols=221 Identities=22% Similarity=0.329 Sum_probs=164.2
Q ss_pred HhccCCCCccceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 009404 276 LSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHR 355 (535)
Q Consensus 276 l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~ 355 (535)
|+.+.|.|+.+++|.+.+. ...++|.+|++.|+|.+.+.. ....++|.....+.++|+.||+|||... -..|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~----~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg 73 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG----PEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSP--IGYHG 73 (484)
T ss_pred CcccchhhhhhheeeEecC----CceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCc--ceeee
Confidence 4678999999999999984 566999999999999999976 3466999999999999999999999764 23999
Q ss_pred CCCCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccC-------CCCccchHHHHHHHHHH
Q 009404 356 DIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVG-------RASLMSDVFSFGVVLLE 428 (535)
Q Consensus 356 DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~s~ksDVwSlGvil~e 428 (535)
.|+++|+++|..+.+||+|||+......... ........-..-|.|||.+... ..+.+.||||||++++|
T Consensus 74 ~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~---~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~e 150 (484)
T KOG1023|consen 74 ALKSSNCLVDSRWVLKLTDFGLNSLLEETAE---PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYE 150 (484)
T ss_pred eeccccceeeeeEEEEechhhhccccccccc---ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHH
Confidence 9999999999999999999999877643100 0111112234569999988653 14778999999999999
Q ss_pred HHhCCCCCCCccccccc-hhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 429 LITGRQPIHRSITKGEE-SLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 429 LltG~~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
+++...||+........ .+..+.. .. -.....|.+.... +....+..++..||..+|++||++++|-..+
T Consensus 151 i~~r~~~~~~~~~~~~~~eii~~~~----~~---~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~ 221 (484)
T KOG1023|consen 151 ILFRSGPFDLRNLVEDPDEIILRVK----KG---GSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKL 221 (484)
T ss_pred HHhccCccccccccCChHHHHHHHH----hc---CCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhh
Confidence 99999999764333221 2222211 10 0112222222111 3344688899999999999999999999999
Q ss_pred hhhCCCcc
Q 009404 508 STIAPDKS 515 (535)
Q Consensus 508 ~~l~~~~~ 515 (535)
..+.....
T Consensus 222 ~~~~~~~~ 229 (484)
T KOG1023|consen 222 LTINKGGS 229 (484)
T ss_pred hhhccccc
Confidence 88876543
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=1.8e-19 Score=166.99 Aligned_cols=190 Identities=16% Similarity=0.074 Sum_probs=138.4
Q ss_pred CCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCC---hhHHHHHHHHHHhcc-CCCCccceeeeeeecccCcceEEEE
Q 009404 229 GSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPN---ADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 229 ~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
....|++|+||+||.+.. ++..++.+.+....... ....+.+|+++|++| +|+++++++++. ..+++
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~--------~~~lv 76 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD--------GRHLD 76 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc--------CEEEE
Confidence 356799999999997766 67888888887654321 123578999999999 458899998862 23899
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCEEeCCCCcEEEEecCCcccccc
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDI-KSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DL-k~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
|||+.|.+|...+.. ....++.|++.+|+++|+.| |+|||| ||.|||++.++.++|+|||++.....
T Consensus 77 meyI~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~ 144 (218)
T PRK12274 77 RSYLAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP 144 (218)
T ss_pred EeeecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence 999999998754321 11357789999999999999 999999 79999999999999999999985543
Q ss_pred CCCCC---CCCC-----CCccccCccccCcccccc-CCCC-ccchHHHHHHHHHHHHhCCCCCCCc
Q 009404 384 DGLPS---CSSS-----PARMQGTFGYFAPEYAMV-GRAS-LMSDVFSFGVVLLELITGRQPIHRS 439 (535)
Q Consensus 384 ~~~~~---~~~~-----~~~~~gt~~y~aPE~~~~-~~~s-~ksDVwSlGvil~eLltG~~P~~~~ 439 (535)
..... .... ......++.|++|+...- ...+ ...+.++-|..+|.++|++.|....
T Consensus 145 ~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 145 RARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 21100 0000 001124667777774432 2334 4668889999999999999887543
No 420
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.81 E-value=4.7e-19 Score=172.62 Aligned_cols=233 Identities=20% Similarity=0.282 Sum_probs=147.1
Q ss_pred CcccceeCceEEEEEEEcC-CcEEEEEEeccCCC--CChhHHHHHHHHHHhccCC----------CCccceeeeeee---
Q 009404 230 SNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGG--PNADSVFLTEVDMLSRLHH----------CHVVPLVGYCSE--- 293 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~--~~~~~~~~~Ei~~l~~l~H----------~niv~l~g~~~~--- 293 (535)
.+.||.|+++.||.+++.. ++.+|||++..... ....+.+.+|.-....+.+ -.++-.++...-
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 5779999999999999865 89999999875442 2233456666655554322 122222222211
Q ss_pred -----ccc--Ccc---eEEEEEecCCCCCHHHhhhh---cccC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 009404 294 -----FRG--KRA---MRLLVFEFMPNGNLRDCLDG---VLVE--GMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIK 358 (535)
Q Consensus 294 -----~~~--~~~---~~~lV~e~~~~gsL~~~l~~---~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk 358 (535)
... ... ..+++|+-+ .++|.+++.. .... .+....++.+..|+++.+++||+.| ++|+||+
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgdi~ 172 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHGDIK 172 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEST-S
T ss_pred CcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEecccc
Confidence 010 011 236778877 6789888642 1111 2445566778899999999999999 9999999
Q ss_pred CCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCcccccc--------CCCCccchHHHHHHHHHHHH
Q 009404 359 SSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMV--------GRASLMSDVFSFGVVLLELI 430 (535)
Q Consensus 359 ~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~ksDVwSlGvil~eLl 430 (535)
|+|+|++.+|.++|+||+.......... ....+..|.|||.... -.++.+.|.|++|+++|.|+
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~~--------~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRYR--------CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEEE--------GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred eeeEEEcCCCCEEEcChHHHeecCceee--------ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 9999999999999999987765543211 0234577999997643 24688999999999999999
Q ss_pred hCCCCCCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 009404 431 TGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDAR 497 (535)
Q Consensus 431 tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~R 497 (535)
.++.||........... . -..+. +.++.+..|+..+|+.||++|
T Consensus 245 C~~lPf~~~~~~~~~~~---------------------~-f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW---------------------D-FSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSGG---------------------G-GTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccccc---------------------c-chhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999975433221110 1 11333 566779999999999999988
No 421
>PRK10345 hypothetical protein; Provisional
Probab=99.80 E-value=9.1e-19 Score=165.08 Aligned_cols=140 Identities=19% Similarity=0.216 Sum_probs=106.7
Q ss_pred CCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-----CCCCccceeeeeeecccCcceEE
Q 009404 228 SGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-----HHCHVVPLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 228 ~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-----~H~niv~l~g~~~~~~~~~~~~~ 302 (535)
+..+.||+|+||.||. +.+....+||++..... ...+.+.+|+.+++.+ .||||++++|++.+..+......
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~-~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGD-GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEecccc-chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 4457899999999996 43323347998875432 2345689999999999 57999999999987554344445
Q ss_pred EEEec--CCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCeeecCCCCCCEEeCC----CCcEEEEec
Q 009404 303 LVFEF--MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGL-EYLHEAAAPRILHRDIKSSNILLDE----NLNAKITDL 375 (535)
Q Consensus 303 lV~e~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L-~~LH~~~~~~i~H~DLk~~NILl~~----~~~vkL~DF 375 (535)
+|+|| +++++|.+++.+. .+++. ..++.+++.++ +|||+++ |+||||||+|||++. +..++|+||
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 89999 5579999999652 35555 35677888777 9999998 999999999999973 347999995
Q ss_pred CCc
Q 009404 376 GMA 378 (535)
Q Consensus 376 Gla 378 (535)
+-+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 443
No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=1.1e-18 Score=192.15 Aligned_cols=257 Identities=19% Similarity=0.208 Sum_probs=180.9
Q ss_pred HHHHHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccC---CCCccceeeeeeecc
Q 009404 219 ALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH---HCHVVPLVGYCSEFR 295 (535)
Q Consensus 219 ~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~ 295 (535)
+++.--..|.+.+.||+|+||+||+|...+|+.||+|+-+.....+ |.--.+++.+|+ -+-|..+...+.-.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~- 766 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE----FYICLQVMERLKPQMLPSIMHISSAHVFQ- 766 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee----eeehHHHHHhhchhhhcchHHHHHHHccC-
Confidence 3444556788889999999999999999889999999988665443 333344555554 22333333333321
Q ss_pred cCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC-------CCC
Q 009404 296 GKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLD-------ENL 368 (535)
Q Consensus 296 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~-------~~~ 368 (535)
..-+||+||.+.|+|.++++. .+.++|...+.++.|++..+++||..+ |||+||||+|.||. ++.
T Consensus 767 ---~~S~lv~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~ 838 (974)
T KOG1166|consen 767 ---NASVLVSEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSK 838 (974)
T ss_pred ---CcceeeeeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCccc
Confidence 233899999999999999983 477999999999999999999999998 99999999999994 344
Q ss_pred cEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhh
Q 009404 369 NAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLV 448 (535)
Q Consensus 369 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~ 448 (535)
.++|+|||.+..+.--. .........+|-.+--+|...+.+++.+.|.|.|+.+++-||.|+..-
T Consensus 839 ~l~lIDfG~siDm~lfp---~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q------------ 903 (974)
T KOG1166|consen 839 GLYLIDFGRSIDMKLFP---DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME------------ 903 (974)
T ss_pred ceEEEecccceeeeEcC---CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH------------
Confidence 58999999987654211 012344566788899999999999999999999999999999986431
Q ss_pred hhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcc
Q 009404 449 LWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515 (535)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~ 515 (535)
.|....+ .++..++..+..+. ..+++..+|+.|-..=|...++...|+..+.+..
T Consensus 904 ~~~g~~~---------~~~~~~~Ry~~~~~---W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~~ 958 (974)
T KOG1166|consen 904 VKNGSSW---------MVKTNFPRYWKRDM---WNKFFDLLLNPDCDTLPNLQELRTELEEVLAEHF 958 (974)
T ss_pred hcCCcce---------eccccchhhhhHHH---HHHHHHHHhCcCcccchhHHHHHHHHHHHHHHHH
Confidence 1111110 11111111112222 3345566666444444788888888877766544
No 423
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.77 E-value=6e-20 Score=189.77 Aligned_cols=226 Identities=25% Similarity=0.301 Sum_probs=177.9
Q ss_pred ccceeCceEEEEEE----EcCCcEEEEEEeccCCCCChh-HHHHHHHHHHhccC-CCCccceeeeeeecccCcceEEEEE
Q 009404 232 IVGQGGSSYVYRGQ----LTDGRIVAVKRFKTQGGPNAD-SVFLTEVDMLSRLH-HCHVVPLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 232 ~LG~G~fG~Vy~~~----~~~g~~vaVK~l~~~~~~~~~-~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~~~~lV~ 305 (535)
.+|+|.||.|++.+ .+.+..+|.|.++........ .....|..++..++ ||.++++.-.+.. +...++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt----~~kl~l~l 76 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQT----DGKLYLIL 76 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecc----ccchhHhh
Confidence 37999999999764 334788999988755322111 13456788888886 9999998766554 44669999
Q ss_pred ecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCC
Q 009404 306 EFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADG 385 (535)
Q Consensus 306 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~ 385 (535)
+|..+|.|...+... ..+++.....+...++-+++++|+.+ |+|||+|++||+++.+|++++.|||+++..-...
T Consensus 77 d~~rgg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~ 151 (612)
T KOG0603|consen 77 DFLRGGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK 151 (612)
T ss_pred hhcccchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhh
Confidence 999999999888653 34677777788888999999999999 9999999999999999999999999998775543
Q ss_pred CCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccC
Q 009404 386 LPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISEL 465 (535)
Q Consensus 386 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (535)
. ..||..|||||.+. .....+|.||||++.+||+||..||.... +..+
T Consensus 152 ~---------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~---------------------~~~I 199 (612)
T KOG0603|consen 152 I---------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDT---------------------MKRI 199 (612)
T ss_pred h---------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHH---------------------HHHH
Confidence 2 17899999999887 66778999999999999999999996410 1111
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 009404 466 PDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTM 500 (535)
Q Consensus 466 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 500 (535)
.. .....|.+......+++..++..+|.+|.-.
T Consensus 200 l~--~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 200 LK--AELEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred hh--hccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 11 1224677888889999999999999999655
No 424
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.74 E-value=1.7e-17 Score=156.22 Aligned_cols=143 Identities=20% Similarity=0.132 Sum_probs=110.3
Q ss_pred HHHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCC---------------------ChhHHHHHHHHHHhcc
Q 009404 221 EHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGP---------------------NADSVFLTEVDMLSRL 279 (535)
Q Consensus 221 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~---------------------~~~~~~~~Ei~~l~~l 279 (535)
......|...+.||+|+||.||++...+|+.||||++...... .....+..|+.++..+
T Consensus 11 ~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 90 (198)
T cd05144 11 VKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL 90 (198)
T ss_pred HHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH
Confidence 3333347778999999999999999888999999987643210 0111256788899999
Q ss_pred CCCC--ccceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 009404 280 HHCH--VVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDI 357 (535)
Q Consensus 280 ~H~n--iv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DL 357 (535)
.|++ ++..++. ...++||||+++++|.+.... .....++.+++.++.++|+.+ |+|+||
T Consensus 91 ~~~~i~v~~~~~~--------~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl 151 (198)
T cd05144 91 YEEGFPVPKPIDW--------NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHG---IIHGDL 151 (198)
T ss_pred HHcCCCCCceeec--------CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCC---CCcCCC
Confidence 7774 4444432 123899999999999765431 235678899999999999988 999999
Q ss_pred CCCCEEeCCCCcEEEEecCCccccc
Q 009404 358 KSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 358 k~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+|.||++++++.++|+|||++....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCC
Confidence 9999999999999999999996554
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=3.4e-17 Score=155.61 Aligned_cols=135 Identities=20% Similarity=0.307 Sum_probs=110.7
Q ss_pred cccceeCceEEEEEEEcCCcEEEEEEeccCCCCCh-------hHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 231 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNA-------DSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~-------~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
+.||+|++|.||+|.+ +|..++||+......... ...+.+|++++..+.|+++.....++... ...++
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~----~~~~l 76 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP----ENFII 76 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC----CCCEE
Confidence 5799999999999988 577899998764432111 12477899999999999988776665542 24589
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
+|||+++++|.+++... .+ .+..++.+++.+|.+||+.+ ++|+|++|.|||++ ++.++|+|||.+..
T Consensus 77 v~e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 77 VMEYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999999998642 22 78899999999999999998 99999999999999 78899999998764
No 426
>smart00090 RIO RIO-like kinase.
Probab=99.73 E-value=2.2e-17 Score=159.28 Aligned_cols=143 Identities=19% Similarity=0.162 Sum_probs=110.0
Q ss_pred CCCCCcccceeCceEEEEEE--EcCCcEEEEEEeccCCCCC-----------------------hhHHHHHHHHHHhccC
Q 009404 226 KFSGSNIVGQGGSSYVYRGQ--LTDGRIVAVKRFKTQGGPN-----------------------ADSVFLTEVDMLSRLH 280 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~--~~~g~~vaVK~l~~~~~~~-----------------------~~~~~~~Ei~~l~~l~ 280 (535)
-|.+.+.||+|+||.||+|. ..+|+.||||+++...... ....+..|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47778999999999999998 4579999999997542110 0122568999999997
Q ss_pred CC--CccceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 009404 281 HC--HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIK 358 (535)
Q Consensus 281 H~--niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk 358 (535)
+. .+.+++++. ..++||||+++.+|....... ..+.......++.|++.+|.+||+.+ .|+|+|||
T Consensus 109 ~~~i~~p~~~~~~--------~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dik 176 (237)
T smart00090 109 EAGVPVPKPIAWR--------RNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLS 176 (237)
T ss_pred hcCCCCCeeeEec--------CceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCC
Confidence 53 333444321 238999999998887764221 23556667899999999999999986 49999999
Q ss_pred CCCEEeCCCCcEEEEecCCcccc
Q 009404 359 SSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 359 ~~NILl~~~~~vkL~DFGla~~~ 381 (535)
|+||+++ ++.++|+|||.+...
T Consensus 177 p~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 177 EYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hhhEEEE-CCCEEEEEChhhhcc
Confidence 9999999 789999999998754
No 427
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.72 E-value=1.8e-18 Score=175.58 Aligned_cols=177 Identities=25% Similarity=0.376 Sum_probs=132.2
Q ss_pred eEEEEEecCCCCCHHHhhhh-cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCc
Q 009404 300 MRLLVFEFMPNGNLRDCLDG-VLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMA 378 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla 378 (535)
++|+.|+++...+|.+||.+ ......++.....++.|++.|+.| ++ .+|+|+||.||++..+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhhe
Confidence 57899999999999999964 344558899999999999999999 66 899999999999999999999999998
Q ss_pred cccccCCCCCC-CCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCccccccchhhhhcccccc
Q 009404 379 KRLKADGLPSC-SSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELIT-GRQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 379 ~~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLlt-G~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
..........+ ....+...||..||+||.+.+..|+.|+|||+||+||+||++ -..+++..... .
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~-------------~ 470 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATL-------------T 470 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhh-------------h
Confidence 87765542111 223456789999999999999999999999999999999998 33333211100 0
Q ss_pred CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 009404 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEV 503 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ev 503 (535)
+ .-....++.....+|. =+.|+.+++...|.+||++.++
T Consensus 471 d---~r~g~ip~~~~~d~p~-----e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 471 D---IRDGIIPPEFLQDYPE-----EYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred h---hhcCCCChHHhhcCcH-----HHHHHHHhcCCCcccCchHHHH
Confidence 0 0001112222223333 2568899999999999955443
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.72 E-value=6.5e-17 Score=152.27 Aligned_cols=131 Identities=22% Similarity=0.336 Sum_probs=103.7
Q ss_pred ccceeCceEEEEEEEcCCcEEEEEEeccCCCCCh-------hHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEE
Q 009404 232 IVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNA-------DSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLV 304 (535)
Q Consensus 232 ~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~-------~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV 304 (535)
.||+|+||.||+|.+ ++..|++|+......... ...+.+|++++..+.|+++.....++.. ....++|
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~----~~~~~lv 75 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD----PDNKTIV 75 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE----CCCCEEE
Confidence 489999999999996 578899998764322111 1346789999999988876544444433 2234899
Q ss_pred EecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 305 FEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 305 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
|||+++++|.+++..... .++.+++.+|.+||+.+ ++|+|++|.||+++ ++.++++|||++..
T Consensus 76 ~e~~~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 76 MEYIEGKPLKDVIEEGND---------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EEEECCccHHHHHhhcHH---------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999999998754210 78999999999999998 99999999999999 78999999998865
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.71 E-value=5.9e-17 Score=175.36 Aligned_cols=143 Identities=20% Similarity=0.304 Sum_probs=111.2
Q ss_pred HHHHHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCC-CC------ChhHHHHHHHHHHhccCCCCccceeeee
Q 009404 219 ALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQG-GP------NADSVFLTEVDMLSRLHHCHVVPLVGYC 291 (535)
Q Consensus 219 ~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~-~~------~~~~~~~~Ei~~l~~l~H~niv~l~g~~ 291 (535)
..+.....|...+.||+|+||+||+|.+.+.. +++|+..... .. ...+.+.+|+++++.++|++++....++
T Consensus 327 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~ 405 (535)
T PRK09605 327 KEEEVKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYD 405 (535)
T ss_pred cccccccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEE
Confidence 33344455667889999999999999886443 4444432211 11 1123478999999999999998877666
Q ss_pred eecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEE
Q 009404 292 SEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAK 371 (535)
Q Consensus 292 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vk 371 (535)
.+. ...++||||+++++|.+++. ....++.+++++|.+||+.+ ++||||||+|||+ +++.++
T Consensus 406 ~~~----~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~ 467 (535)
T PRK09605 406 VDP----EEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLY 467 (535)
T ss_pred EeC----CCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEE
Confidence 542 24589999999999999875 34678999999999999998 9999999999999 577999
Q ss_pred EEecCCccc
Q 009404 372 ITDLGMAKR 380 (535)
Q Consensus 372 L~DFGla~~ 380 (535)
|+|||+++.
T Consensus 468 liDFGla~~ 476 (535)
T PRK09605 468 LIDFGLGKY 476 (535)
T ss_pred EEeCccccc
Confidence 999999875
No 430
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.65 E-value=1.1e-16 Score=173.39 Aligned_cols=211 Identities=23% Similarity=0.353 Sum_probs=141.8
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
.+|..++.|..|++|.||..+++. .+.+|.|+ +++. .+++ ||+.+.+ ..++
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~------lilR-----------nilt~a~----------npfv 134 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQN------LILR-----------NILTFAG----------NPFV 134 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcc-cccc------hhhh-----------ccccccC----------Ccce
Confidence 567888999999999999998874 56677743 2211 0121 1222221 1122
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
| |+=...+... ..++.. ++.+++|||+.+ |+|||+||+|.+|+.-|++|++|||+++....
T Consensus 135 v------gDc~tllk~~--g~lPvd--------mvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLm 195 (1205)
T KOG0606|consen 135 V------GDCATLLKNI--GPLPVD--------MVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLM 195 (1205)
T ss_pred e------chhhhhcccC--CCCcch--------hhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhh
Confidence 2 4444444432 222222 277899999998 99999999999999999999999999875432
Q ss_pred CCC--------CC--CCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccc
Q 009404 384 DGL--------PS--CSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453 (535)
Q Consensus 384 ~~~--------~~--~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~ 453 (535)
... .. .........||+.|.|||++...-|...+|.|++|+|+||.+.|..||+...+.+-...+...
T Consensus 196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd-- 273 (1205)
T KOG0606|consen 196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD-- 273 (1205)
T ss_pred hccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhh--
Confidence 110 00 011234457999999999999999999999999999999999999999876554322221111
Q ss_pred cccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 009404 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARP 498 (535)
Q Consensus 454 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP 498 (535)
++..+.-....+ .+.++++.++|+.+|..|.
T Consensus 274 ----------~i~wpE~dea~p----~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 274 ----------DIEWPEEDEALP----PEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred ----------hccccccCcCCC----HHHHHHHHHHHHhChHhhc
Confidence 111111122223 3478899999999999994
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.64 E-value=1.3e-15 Score=141.94 Aligned_cols=137 Identities=24% Similarity=0.261 Sum_probs=97.9
Q ss_pred CcccceeCceEEEEEEEcCCcEEEEEEeccCCCCCh-hHH----------------------HHHHHHHHhccCCC--Cc
Q 009404 230 SNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNA-DSV----------------------FLTEVDMLSRLHHC--HV 284 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~-~~~----------------------~~~Ei~~l~~l~H~--ni 284 (535)
.+.||+|+||+||+|...+++.||||++........ ... ...|.+.+..+.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 467999999999999988899999999875421111 111 13455666666433 34
Q ss_pred cceeeeeeecccCcceEEEEEecCCCCCHHHh-hhhcccCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCE
Q 009404 285 VPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDC-LDGVLVEGMNWDTRVAIAIGAARGLEYLHE-AAAPRILHRDIKSSNI 362 (535)
Q Consensus 285 v~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~i~H~DLk~~NI 362 (535)
.+.+++. ..++||||++++.+... +.... .. .....++.+++.++.++|. .+ |+|+||||+||
T Consensus 82 ~~~~~~~--------~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Ni 146 (187)
T cd05119 82 PKPIDLN--------RHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNI 146 (187)
T ss_pred CceEecC--------CCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhE
Confidence 4444431 24899999998544321 21110 11 5678899999999999999 77 99999999999
Q ss_pred EeCCCCcEEEEecCCccccc
Q 009404 363 LLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 363 Ll~~~~~vkL~DFGla~~~~ 382 (535)
+++ ++.++|+|||.+....
T Consensus 147 li~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 147 LVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred EEE-CCcEEEEECccccccc
Confidence 999 8899999999997543
No 432
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.63 E-value=4.9e-15 Score=143.25 Aligned_cols=140 Identities=16% Similarity=0.198 Sum_probs=106.9
Q ss_pred Ccccc-eeCceEEEEEEEcCCcEEEEEEeccCC------------CCChhHHHHHHHHHHhccCCCCc--cceeeeeeec
Q 009404 230 SNIVG-QGGSSYVYRGQLTDGRIVAVKRFKTQG------------GPNADSVFLTEVDMLSRLHHCHV--VPLVGYCSEF 294 (535)
Q Consensus 230 ~~~LG-~G~fG~Vy~~~~~~g~~vaVK~l~~~~------------~~~~~~~~~~Ei~~l~~l~H~ni--v~l~g~~~~~ 294 (535)
...|| .|+.|+||++... +..++||++.... .......+.+|++++..+.|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35687 8999999999885 6789999885321 01222447889999999988875 6777765443
Q ss_pred ccCcceEEEEEecCCC-CCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEE
Q 009404 295 RGKRAMRLLVFEFMPN-GNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKIT 373 (535)
Q Consensus 295 ~~~~~~~~lV~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~ 373 (535)
.......++||||+++ .+|.+++.. ..++.. .+.+++.+|.+||+.| |+|+||||.|||++.++.++|+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence 2222234699999997 699988864 234443 3568999999999999 9999999999999988899999
Q ss_pred ecCCccc
Q 009404 374 DLGMAKR 380 (535)
Q Consensus 374 DFGla~~ 380 (535)
|||.+..
T Consensus 185 Dfg~~~~ 191 (239)
T PRK01723 185 DFDRGEL 191 (239)
T ss_pred ECCCccc
Confidence 9998865
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.62 E-value=4.8e-15 Score=131.96 Aligned_cols=134 Identities=21% Similarity=0.194 Sum_probs=110.6
Q ss_pred CcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCC--CCccceeeeeeecccCcceEEEEEec
Q 009404 230 SNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHH--CHVVPLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
.+.||+|.++.||++...+ ..+++|....... ...+.+|+.++..++| .++++++++... ....+++|||
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~----~~~~~~v~e~ 74 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGES----DGWSYLLMEW 74 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC----CCccEEEEEe
Confidence 4679999999999999864 7899999865432 3458899999999966 588888877654 2456999999
Q ss_pred CCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 308 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
++++++..+ +......++.+++++|++||......++|+||+|.||++++++.+++.|||.+..
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 988877654 5566788899999999999986444599999999999999989999999998864
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.55 E-value=7.9e-16 Score=166.46 Aligned_cols=260 Identities=25% Similarity=0.276 Sum_probs=187.4
Q ss_pred CCCCCcccceeCceEEEEEEEcC--CcEEEEEEeccCC-CCChhHHHHHHHHHHhccC-CCCccceeeeeeecccCcceE
Q 009404 226 KFSGSNIVGQGGSSYVYRGQLTD--GRIVAVKRFKTQG-GPNADSVFLTEVDMLSRLH-HCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 226 ~f~~~~~LG~G~fG~Vy~~~~~~--g~~vaVK~l~~~~-~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~~~ 301 (535)
.|...+.||+|.|+.|-...... ...+|+|.+.... ..........|..+-..+. |+|++.+++...+ ....
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~----~~~~ 96 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS----PRSY 96 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC----Cccc
Confidence 34556679999999999887633 4557777665443 2222233445777777775 9999999987765 4456
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeeecCCCCCCEEeCCCC-cEEEEecCCcc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLH-EAAAPRILHRDIKSSNILLDENL-NAKITDLGMAK 379 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~~~~i~H~DLk~~NILl~~~~-~vkL~DFGla~ 379 (535)
+++++|..++++.+-+.......++....-.++.|+..++.|+| +.+ +.|+||||+|.+++..+ ..+++|||+|.
T Consensus 97 ~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 97 LLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred ccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhc
Confidence 89999999999999883222225677778889999999999999 887 99999999999999999 99999999998
Q ss_pred cccc-CCCCCCCCCCCcccc-CccccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcccccc
Q 009404 380 RLKA-DGLPSCSSSPARMQG-TFGYFAPEYAMV-GRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATPRLQ 456 (535)
Q Consensus 380 ~~~~-~~~~~~~~~~~~~~g-t~~y~aPE~~~~-~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~ 456 (535)
.+.. .+. ........| ++.|+|||...+ .......|+||.|+++.-+++|..|++......... ..|....
T Consensus 174 ~~~~~~g~---~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~-~~~~~~~-- 247 (601)
T KOG0590|consen 174 AYRNKNGA---ERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY-SSWKSNK-- 247 (601)
T ss_pred cccccCCc---ceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc-eeecccc--
Confidence 8776 332 223344567 999999998887 455788999999999999999999997655443211 1111100
Q ss_pred CcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 457 DSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 457 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
................++..+++..+|+.|.+.+++...=+-
T Consensus 248 -----------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~ 289 (601)
T KOG0590|consen 248 -----------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWL 289 (601)
T ss_pred -----------cccccCccccCChhhhhcccccccCCchhccccccccccccc
Confidence 000011122223346677888888999999999988765433
No 435
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.49 E-value=1.7e-13 Score=143.87 Aligned_cols=149 Identities=23% Similarity=0.226 Sum_probs=104.1
Q ss_pred HhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChh------------------------------------
Q 009404 223 ATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNAD------------------------------------ 266 (535)
Q Consensus 223 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~------------------------------------ 266 (535)
....|+ .+.||.|++|.||+|++.+|+.||||+.+........
T Consensus 116 ~F~~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l 194 (437)
T TIGR01982 116 LFAEFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTL 194 (437)
T ss_pred HHhhCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHH
Confidence 334455 3679999999999999999999999998654211000
Q ss_pred ---HHHHHHHHHHhcc----CCCCccceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHH
Q 009404 267 ---SVFLTEVDMLSRL----HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAAR 339 (535)
Q Consensus 267 ---~~~~~Ei~~l~~l----~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~ 339 (535)
-+|.+|+..+.++ +|.+-+.+-.++.+.. ...+|||||++|++|.++..... ... ....++..++.
T Consensus 195 ~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~---~~~vLvmE~i~G~~L~~~~~~~~-~~~---~~~~ia~~~~~ 267 (437)
T TIGR01982 195 RRELDLRREAANASELGENFKNDPGVYVPEVYWDRT---SERVLTMEWIDGIPLSDIAALDE-AGL---DRKALAENLAR 267 (437)
T ss_pred HHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhc---CCceEEEEeECCcccccHHHHHh-cCC---CHHHHHHHHHH
Confidence 0144455555554 2333344444444322 23589999999999998865321 122 23456666665
Q ss_pred -HHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 340 -GLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 340 -~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
.+..+|..| ++|+|++|.||++++++.++++|||++..+.
T Consensus 268 ~~l~ql~~~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 268 SFLNQVLRDG---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHhCC---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 478889888 9999999999999999999999999997664
No 436
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.41 E-value=5.3e-13 Score=128.21 Aligned_cols=211 Identities=20% Similarity=0.284 Sum_probs=141.9
Q ss_pred HHHhccCCCCccceeeeeeeccc-CcceEEEEEecCCCCCHHHhhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 009404 274 DMLSRLHHCHVVPLVGYCSEFRG-KRAMRLLVFEFMPNGNLRDCLDGVL--VEGMNWDTRVAIAIGAARGLEYLHEAAAP 350 (535)
Q Consensus 274 ~~l~~l~H~niv~l~g~~~~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~ 350 (535)
.-|-++.|-|||++..|+.+... ......++.|||+-|+|..+|++.. ...+......+++-||..||.|||+.. |
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~-P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD-P 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC-C
Confidence 34555679999999999876544 3456688999999999999997643 344778888999999999999999985 6
Q ss_pred CeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHH
Q 009404 351 RILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELI 430 (535)
Q Consensus 351 ~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLl 430 (535)
+|+|+++.-+.|++..++-+|+.--. .......-..........-.+-++|.+||+=.....+-.+|||+||+-.+||-
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~a-p~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVA-PDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEecccC-ccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 79999999999999999888875211 11110000000001112234568899999877777788999999999999998
Q ss_pred hCCCCCCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 009404 431 TGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQIL 507 (535)
Q Consensus 431 tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 507 (535)
-+..-........+... .....+.-+-++. -+.++.+|++..|..||+|.+++-+.
T Consensus 277 ilEiq~tnseS~~~~ee---------~ia~~i~~len~l------------qr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEE---------NIANVIIGLENGL------------QRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HheeccCCCcceeehhh---------hhhhheeeccCcc------------ccCcCcccccCCCCCCcchhhhhcCc
Confidence 87644222111100000 0000000000110 13467889999999999999987643
No 437
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.33 E-value=5.8e-12 Score=133.99 Aligned_cols=149 Identities=18% Similarity=0.204 Sum_probs=99.3
Q ss_pred HHHHhcCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCCCC---------------------------------Ch
Q 009404 220 LEHATDKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQGGP---------------------------------NA 265 (535)
Q Consensus 220 l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~~~---------------------------------~~ 265 (535)
++.....|+. +.||+|++|.||+|++++ |+.||||+++..... +.
T Consensus 115 ~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~ 193 (537)
T PRK04750 115 VEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEF 193 (537)
T ss_pred HHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHH
Confidence 3444566776 789999999999999988 999999999754210 00
Q ss_pred hH------HHHHHHHHHhcc----CCCCccceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCC-----HHHH
Q 009404 266 DS------VFLTEVDMLSRL----HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMN-----WDTR 330 (535)
Q Consensus 266 ~~------~~~~Ei~~l~~l----~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~-----~~~~ 330 (535)
.+ +|.+|+..+.++ .+.+.+.+-.++.+.. ...+|||||++|++|.++-.-. ..+.+ ....
T Consensus 194 ~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s---t~~VLvmE~i~G~~l~d~~~l~-~~g~d~~~la~~~v 269 (537)
T PRK04750 194 EKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC---SETVMVMERMYGIPVSDVAALR-AAGTDMKLLAERGV 269 (537)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccC---CCceEEEeeecCccHHhHHHHH-hcCCCHHHHHHHHH
Confidence 01 144555554444 2444555555555432 2458999999999998752111 12222 2222
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC----cEEEEecCCcccccc
Q 009404 331 VAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL----NAKITDLGMAKRLKA 383 (535)
Q Consensus 331 ~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~----~vkL~DFGla~~~~~ 383 (535)
..++.| +...| ++|+|++|.||+++.++ .+++.|||++..+..
T Consensus 270 ~~~~~Q-------if~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 270 EVFFTQ-------VFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHH-------HHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 233333 34567 99999999999999888 999999999887643
No 438
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.32 E-value=9.4e-12 Score=113.74 Aligned_cols=130 Identities=18% Similarity=0.082 Sum_probs=96.0
Q ss_pred cccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCcc-ceeeeeeecccCcceEEEEEecCC
Q 009404 231 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV-PLVGYCSEFRGKRAMRLLVFEFMP 309 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv-~l~g~~~~~~~~~~~~~lV~e~~~ 309 (535)
+.|+.|.++.||+++.. +..+++|+...... ....+..|+++++.+.+.+++ +++.+... ..++||||++
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~------~~~lv~e~i~ 74 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFDPE------TGVLITEFIE 74 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEeCC------CCeEEEEecC
Confidence 56888999999999875 77899999765432 122367899999988655544 55544321 2379999999
Q ss_pred CCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 310 NGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA--APRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 310 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
+.++.+.- .....++.+++++|+.||..+ ...++|+|++|.||+++ ++.++++|||.+..
T Consensus 75 G~~l~~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTED----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCcccccc----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 98876430 111345678999999999886 22369999999999999 56899999998753
No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.32 E-value=2.9e-12 Score=133.11 Aligned_cols=253 Identities=21% Similarity=0.261 Sum_probs=177.6
Q ss_pred cCCCCCcccce--eCceEEEEEEE---cCCcEEEEEEeccCCC-CChhHHHHHHHHHHhcc-CCCCccceeeeeeecccC
Q 009404 225 DKFSGSNIVGQ--GGSSYVYRGQL---TDGRIVAVKRFKTQGG-PNADSVFLTEVDMLSRL-HHCHVVPLVGYCSEFRGK 297 (535)
Q Consensus 225 ~~f~~~~~LG~--G~fG~Vy~~~~---~~g~~vaVK~l~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 297 (535)
..|.....+|. |.+|.||.+.. .++..+|+|+-+.... +.....-.+|+..-+.+ .|+|.++....+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~---- 189 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG---- 189 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc----
Confidence 34556678999 99999999987 3588899998654322 22222345777777777 59999996655544
Q ss_pred cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCeeecCCCCCCEEeCCC-CcEEE
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAAR----GLEYLHEAAAPRILHRDIKSSNILLDEN-LNAKI 372 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~----~L~~LH~~~~~~i~H~DLk~~NILl~~~-~~vkL 372 (535)
....++-+|++ +.+|.++.... ...++....+.+..+..+ ||.++|... ++|-|+||.||+...+ ...++
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~ 264 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKL 264 (524)
T ss_pred CCcceeeeccc-cchhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeec
Confidence 44568888888 57888887653 233677777788888888 999999998 9999999999999999 88999
Q ss_pred EecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhcc
Q 009404 373 TDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWAT 452 (535)
Q Consensus 373 ~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~ 452 (535)
+|||+...+.............+..|...|++||. ..+.++..+|+|++|.++.+-..+..+...... ..|..
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~-~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~------~~W~~ 337 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKEL-LNGLATFASDIFSLGEVILEAILGSHLPSVGKN------SSWSQ 337 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhh-hccccchHhhhcchhhhhHhhHhhcccccCCCC------CCccc
Confidence 99999988877654333333344467788999994 467888999999999999999988655432110 01110
Q ss_pred ccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009404 453 PRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQ 505 (535)
Q Consensus 453 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 505 (535)
++.. .+..++-......+...+..+++.+|..|++.+.+..
T Consensus 338 ---------~r~~---~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 ---------LRQG---YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ---------cccc---cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0000 0111111112233555888899999999999887654
No 440
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.30 E-value=8.2e-11 Score=123.58 Aligned_cols=232 Identities=17% Similarity=0.204 Sum_probs=150.6
Q ss_pred EcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCC
Q 009404 246 LTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGM 325 (535)
Q Consensus 246 ~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l 325 (535)
..++.+|.|...+.... .......+-++.|+.++||||++++..... ....|||+|-+ ..|..++...
T Consensus 34 k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~----~~~~ylvTErV--~Pl~~~lk~l----- 101 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEE----EGTLYLVTERV--RPLETVLKEL----- 101 (690)
T ss_pred eccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcc----cCceEEEeecc--ccHHHHHHHh-----
Confidence 34688899998876654 333446778899999999999999987765 44779999998 5788888653
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCc
Q 009404 326 NWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAP 405 (535)
Q Consensus 326 ~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aP 405 (535)
........+.||+.||.|||+.+ .++|++|....|+|++.|+.||++|.++........ ......--..|..|
T Consensus 102 ~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-----~~~~~~~~~s~~~P 174 (690)
T KOG1243|consen 102 GKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-----PAKSLYLIESFDDP 174 (690)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-----ccccchhhhcccCh
Confidence 34566677899999999999766 499999999999999999999999988765432210 00111111235666
Q ss_pred cccccCCCCccchHHHHHHHHHHHHhCCCCCCCcc--c-cccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHH
Q 009404 406 EYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSI--T-KGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIM 482 (535)
Q Consensus 406 E~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 482 (535)
+.+.... ...|.|.||++++|++.|..+-.... . .......... .+++..... . ....
T Consensus 175 ~~~~~s~--~s~D~~~Lg~li~el~ng~~~~~~~~~~~~~ipk~~~~~~----------~k~~~~~~~------~-r~n~ 235 (690)
T KOG1243|consen 175 EEIDPSE--WSIDSWGLGCLIEELFNGSLLTKTDLSNTGKIPKALIELY----------CKKLGATEL------K-RPNK 235 (690)
T ss_pred hhcCccc--cchhhhhHHHHHHHHhCcccCcchhhhccCccchhHHHHH----------HHHhccccc------c-ccch
Confidence 6443222 45699999999999999832211000 0 0000000000 000000000 0 0114
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcc
Q 009404 483 AYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515 (535)
Q Consensus 483 ~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~ 515 (535)
.+++..|....+.-|=.+-+++.+|+++--+..
T Consensus 236 ~~~~~~~~~~~gff~n~fvd~~~fLeel~lks~ 268 (690)
T KOG1243|consen 236 LRFILECRLLGGFFRNDFVDTLLFLEELRLKSV 268 (690)
T ss_pred hhHHHHHHhccccccchHHHHHHHHHhcccCcH
Confidence 556777777777777778888888877754433
No 441
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.24 E-value=1.4e-10 Score=107.64 Aligned_cols=136 Identities=18% Similarity=0.210 Sum_probs=98.3
Q ss_pred cccceeCceEEEEEEEcC-------CcEEEEEEeccCCC---------------------CChhHHHH----HHHHHHhc
Q 009404 231 NIVGQGGSSYVYRGQLTD-------GRIVAVKRFKTQGG---------------------PNADSVFL----TEVDMLSR 278 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~-------g~~vaVK~l~~~~~---------------------~~~~~~~~----~Ei~~l~~ 278 (535)
..||.|-.+.||.|...+ +..+|||+.+.... ......+. +|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998653 47899998863210 01122233 79999999
Q ss_pred cCC--CCccceeeeeeecccCcceEEEEEecCCCCCHHH-hhhhcccCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeee
Q 009404 279 LHH--CHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRD-CLDGVLVEGMNWDTRVAIAIGAARGLEYL-HEAAAPRILH 354 (535)
Q Consensus 279 l~H--~niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~~~~~i~H 354 (535)
+.. -+++.++++. ..+|||||+.+..+.. .|.. ..++......+..+++.+|..| |+.+ ++|
T Consensus 83 l~~~Gv~vP~pi~~~--------~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVH 148 (197)
T cd05146 83 MQKAGIPCPEVVVLK--------KHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECN---LVH 148 (197)
T ss_pred HHHcCCCCCeEEEec--------CCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCC---eec
Confidence 843 5677777642 1289999997654422 2221 1244556677889999999999 7887 999
Q ss_pred cCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 355 RDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 355 ~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
+||++.|||+++ +.+.|+|||.+...
T Consensus 149 GDLs~~NIL~~~-~~v~iIDF~qav~~ 174 (197)
T cd05146 149 ADLSEYNMLWHD-GKVWFIDVSQSVEP 174 (197)
T ss_pred CCCCHHHEEEEC-CcEEEEECCCceeC
Confidence 999999999974 58999999987654
No 442
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.19 E-value=2.3e-10 Score=109.13 Aligned_cols=146 Identities=21% Similarity=0.229 Sum_probs=109.9
Q ss_pred cccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCC--CCccceeeeeeecccCcceEEEEEecC
Q 009404 231 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHH--CHVVPLVGYCSEFRGKRAMRLLVFEFM 308 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~~~~~lV~e~~ 308 (535)
+.|+.|.++.||+++..+|+.+++|.............+..|++++..+.+ .++.+++.+...... ....++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~-~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSV-LGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCc-cCCceEEEEEe
Confidence 568999999999999877788999998654332233457899999999965 345777776554221 12458999999
Q ss_pred CCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 009404 309 PNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA---------------------------------------- 348 (535)
Q Consensus 309 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---------------------------------------- 348 (535)
++.++.+.+.. ..++......++.+++++|..||+..
T Consensus 83 ~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 83 DGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 99988876532 34677778888888888888888521
Q ss_pred -------------CCCeeecCCCCCCEEeCC--CCcEEEEecCCccc
Q 009404 349 -------------APRILHRDIKSSNILLDE--NLNAKITDLGMAKR 380 (535)
Q Consensus 349 -------------~~~i~H~DLk~~NILl~~--~~~vkL~DFGla~~ 380 (535)
...++|+|+.+.||+++. ++.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 135799999999999998 66689999998753
No 443
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.15 E-value=6.5e-10 Score=99.43 Aligned_cols=145 Identities=18% Similarity=0.251 Sum_probs=102.8
Q ss_pred CCcccceeCceEEEEEEEcCCcEEEEEEeccCC-CC------ChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 229 GSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQG-GP------NADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 229 ~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~-~~------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
...+|-+|+.+.|+++.+. |+...||.-.... .. -......+|+++|.++.--.|.-..=++.+...+
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~---- 85 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGG---- 85 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCC----
Confidence 3567889999999999985 7776776443221 11 1123367899999988654554333344443322
Q ss_pred EEEEecCCC-CCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC---cEEEEecCC
Q 009404 302 LLVFEFMPN-GNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL---NAKITDLGM 377 (535)
Q Consensus 302 ~lV~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~---~vkL~DFGl 377 (535)
.|+|||+++ .++.+++...............++..|-+.+.-||..+ |+|+||..+||+|..++ .+.++|||+
T Consensus 86 ~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgl 162 (229)
T KOG3087|consen 86 QIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGL 162 (229)
T ss_pred eEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecc
Confidence 789999966 48888887654333333444788999999999999999 99999999999996444 368999999
Q ss_pred cccc
Q 009404 378 AKRL 381 (535)
Q Consensus 378 a~~~ 381 (535)
+...
T Consensus 163 s~~s 166 (229)
T KOG3087|consen 163 SSVS 166 (229)
T ss_pred hhcc
Confidence 8643
No 444
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.13 E-value=9.6e-10 Score=98.85 Aligned_cols=132 Identities=24% Similarity=0.361 Sum_probs=94.4
Q ss_pred cccceeCceEEEEEEEcCCcEEEEEEeccCC--CCChhH-----HHHHHHHHHhccCCCCccceeeeeeecccCcceEEE
Q 009404 231 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQG--GPNADS-----VFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~--~~~~~~-----~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~l 303 (535)
..+++|+-+.+|.+.+. |.++++|.=.... .++.++ .-.+|+.++++++--.|.-.+=+..+.. ...|
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~----~~~I 76 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD----NGLI 76 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC----CCEE
Confidence 35789999999999875 4446666433221 112221 2457899999885444443332333322 3379
Q ss_pred EEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 304 VFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 304 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
+|||+++..|.+++... ...++..+-.-+.-||..+ |+|+||.++||++..+. +.++||||+..
T Consensus 77 ~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 77 VMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999999999998753 2556677777788899999 99999999999998774 99999999874
No 445
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.09 E-value=2.8e-09 Score=104.39 Aligned_cols=145 Identities=18% Similarity=0.134 Sum_probs=103.3
Q ss_pred ccceeCceEEEEEEEcCCcEEEEEEeccCCCCChh----------HHHHHHHHHHhccCCC--CccceeeeeeecccC-c
Q 009404 232 IVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNAD----------SVFLTEVDMLSRLHHC--HVVPLVGYCSEFRGK-R 298 (535)
Q Consensus 232 ~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~----------~~~~~Ei~~l~~l~H~--niv~l~g~~~~~~~~-~ 298 (535)
.+-......|++..+ +|+.+.||+.......... ..+.+|...+..+... ..++++++....... .
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 344344445777776 5788999987543311111 1367899988888433 344566665432211 2
Q ss_pred ceEEEEEecCCCC-CHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-------CCcE
Q 009404 299 AMRLLVFEFMPNG-NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE-------NLNA 370 (535)
Q Consensus 299 ~~~~lV~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~-------~~~v 370 (535)
..-+||+|++++. +|.+++........+......++.+++..+.-||..| |+|+||+++|||++. +..+
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~ 184 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKL 184 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceE
Confidence 3468999999886 8999986433344566777899999999999999999 999999999999975 5679
Q ss_pred EEEecCCccc
Q 009404 371 KITDLGMAKR 380 (535)
Q Consensus 371 kL~DFGla~~ 380 (535)
.++||+.+..
T Consensus 185 ~LIDl~r~~~ 194 (268)
T PRK15123 185 SVIDLHRAQI 194 (268)
T ss_pred EEEECCcccc
Confidence 9999998853
No 446
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.05 E-value=2e-10 Score=119.63 Aligned_cols=250 Identities=22% Similarity=0.221 Sum_probs=173.7
Q ss_pred HHHhcCCCCCcccceeCceEEEEEEEc--CCcEEEEEEeccCCCCChhHH-HHHHHHHHhcc-CCCCccceeeeeeeccc
Q 009404 221 EHATDKFSGSNIVGQGGSSYVYRGQLT--DGRIVAVKRFKTQGGPNADSV-FLTEVDMLSRL-HHCHVVPLVGYCSEFRG 296 (535)
Q Consensus 221 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~--~g~~vaVK~l~~~~~~~~~~~-~~~Ei~~l~~l-~H~niv~l~g~~~~~~~ 296 (535)
...+.+|.....||.|.|+.|+....+ ++..+++|.+.........+. -+.|+.+...+ .|.++++....+.+.+
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r- 339 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR- 339 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc-
Confidence 344567888999999999999987643 578899999876654333332 35666666666 6888888766655533
Q ss_pred CcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-CcEEEEec
Q 009404 297 KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDEN-LNAKITDL 375 (535)
Q Consensus 297 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~-~~vkL~DF 375 (535)
..|+=-||++++++...+ .....++...++.+..|++.++.++|+.. ++|+|+||+||++..+ +.-+++||
T Consensus 340 ---~~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~ 411 (524)
T KOG0601|consen 340 ---QGYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDF 411 (524)
T ss_pred ---cccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhcccc
Confidence 336888999999988776 23355888889999999999999999988 9999999999999886 77899999
Q ss_pred CCccccccCCCCCCCCCCCccccCcccc--CccccccCCCCccchHHHHHHHHHHHHhCCCCCCCccccccchhhhhccc
Q 009404 376 GMAKRLKADGLPSCSSSPARMQGTFGYF--APEYAMVGRASLMSDVFSFGVVLLELITGRQPIHRSITKGEESLVLWATP 453 (535)
Q Consensus 376 Gla~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~~~~~~~~~~~~~~~~~~ 453 (535)
|....+.... ......-+++ +|+......+..+.|++|||.-+.|.+++..-.... ..|.
T Consensus 412 ~~~t~~~~~~--------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~--------~~~~-- 473 (524)
T KOG0601|consen 412 GCWTRLAFSS--------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG--------VQSL-- 473 (524)
T ss_pred ccccccceec--------ccccccccccccchhhccccccccccccccccccccccccCcccCccc--------ccce--
Confidence 9986532211 1111223344 555555677889999999999999999876432110 0110
Q ss_pred cccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhh
Q 009404 454 RLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILST 509 (535)
Q Consensus 454 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 509 (535)
.+..-.-+. .+... +.+..+.+.+...++..||.+.++..+...
T Consensus 474 -------~i~~~~~p~----~~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 474 -------TIRSGDTPN----LPGLK-LQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred -------eeecccccC----CCchH-HhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 011111111 11111 446667788889999999999887765443
No 447
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.04 E-value=1.2e-10 Score=127.35 Aligned_cols=269 Identities=21% Similarity=0.255 Sum_probs=169.5
Q ss_pred cCCCCCcccceeCceEEEEEEEcC-CcEEEEEEeccCC--CCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceE
Q 009404 225 DKFSGSNIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQG--GPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 225 ~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~ 301 (535)
+.|.+.+-+-+|.++.++.+.-.. |...+.|...... .....+....+-.++...++|-+++..--+. .....
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~----~rsP~ 879 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFP----CRSPL 879 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCC----CCCCc
Confidence 445556667789999988775332 3333333332111 0011111222222332334455554332211 24466
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
+|+++|..+++|..-|+... ..+..........+.+++++||... +.|+|++|.|+|...++..+++|||.....
T Consensus 880 ~L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 880 PLVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred chhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccc
Confidence 99999999999999987643 3454555566667888999999886 899999999999999999999999843322
Q ss_pred cc----CCC------------C------C----CCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCC
Q 009404 382 KA----DGL------------P------S----CSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQP 435 (535)
Q Consensus 382 ~~----~~~------------~------~----~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P 435 (535)
.- .+. . . .........||+.|.+||...+......+|.|++|+.++|.++|..|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 10 000 0 0 00112345689999999999999999999999999999999999999
Q ss_pred CCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhhhCCCcc
Q 009404 436 IHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMSEVVQILSTIAPDKS 515 (535)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~l~~~~~ 515 (535)
|............ .-..+..+ ..+.+....+.+++...+..+|.+|..+.-
T Consensus 1035 ~na~tpq~~f~ni------------~~~~~~~p----~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~------------- 1085 (1205)
T KOG0606|consen 1035 FNAETPQQIFENI------------LNRDIPWP----EGPEEGSYEAQDLINRLLTEEPTQRLGAKG------------- 1085 (1205)
T ss_pred CCCcchhhhhhcc------------ccCCCCCC----CCccccChhhhhhhhhhhccCchhccCccc-------------
Confidence 9755443211100 00111112 223444555788888889999999976641
Q ss_pred cccCCCCCccCccccc
Q 009404 516 RRRNISLNLFQPVAWR 531 (535)
Q Consensus 516 ~~~~~~~~~~~~~~~~ 531 (535)
+.+.-..+++++++|+
T Consensus 1086 ~~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1086 AAEVKGHPFFQDVDWE 1101 (1205)
T ss_pred ccccccCCccCCCCcc
Confidence 1234455666777775
No 448
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.01 E-value=1.1e-08 Score=104.70 Aligned_cols=172 Identities=19% Similarity=0.275 Sum_probs=131.5
Q ss_pred CceEEEEEEE-cCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCCC-CCHH
Q 009404 237 GSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPN-GNLR 314 (535)
Q Consensus 237 ~fG~Vy~~~~-~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~-gsL~ 314 (535)
...+.|++.. .||..+++|+++........+ -..-+++.+++.|+|+|++..++......+.-+++||+|+++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk-~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNK-DTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCccc-chHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 4467899875 479999999995443322211 234578899999999999999988655556788999999975 5777
Q ss_pred Hhhhhc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 315 DCLDGV-------------LVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 315 ~~l~~~-------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
+..-.. .+...++..++.++.|++.||.++|+.| +.-+-|.+++||++.+.+++|+..|....+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeee
Confidence 754211 1123678899999999999999999999 888999999999999999999999988776
Q ss_pred ccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCC
Q 009404 382 KADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQ 434 (535)
Q Consensus 382 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~ 434 (535)
..+.. +| + .--.+-|.=.||.+++.|.||..
T Consensus 444 ~~d~~-----------------~~--l---e~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 444 QEDPT-----------------EP--L---ESQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred cCCCC-----------------cc--h---hHHhhhhHHHHHHHHHHHhhccc
Confidence 55431 00 0 11236799999999999999854
No 449
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.96 E-value=4.7e-08 Score=97.71 Aligned_cols=270 Identities=15% Similarity=0.128 Sum_probs=161.7
Q ss_pred CcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhcc-CCCCccceeeee---eecccCcceEEEEE
Q 009404 230 SNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRL-HHCHVVPLVGYC---SEFRGKRAMRLLVF 305 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~---~~~~~~~~~~~lV~ 305 (535)
.+.||+|+.+.+|-.-.- + ..+-|+......... ...+..|... .||-+-.-+.+= ....+.....-++|
T Consensus 16 gr~LgqGgea~ly~l~e~-~-d~VAKIYh~Pppa~~----aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV-R-DQVAKIYHAPPPAAQ----AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CccccCCccceeeecchh-h-chhheeecCCCchHH----HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 567999999999965321 1 144566654432211 1234445554 566433311110 00111122356778
Q ss_pred ecCCCC-CHHHhhhh----cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 306 EFMPNG-NLRDCLDG----VLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 306 e~~~~g-sL~~~l~~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
+.+++. .+..+++. ..-...+|...+++++.+|.+.+.||+.| ..-+|+.++|+||++++.|.|.|-..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceee
Confidence 877654 33333321 11223789999999999999999999999 89999999999999999999998654433
Q ss_pred cccCCCCCCCCCCCccccCccccCccccc-----cCCCCccchHHHHHHHHHHHHhC-CCCCCCccccccchh--h-hhc
Q 009404 381 LKADGLPSCSSSPARMQGTFGYFAPEYAM-----VGRASLMSDVFSFGVVLLELITG-RQPIHRSITKGEESL--V-LWA 451 (535)
Q Consensus 381 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlGvil~eLltG-~~P~~~~~~~~~~~~--~-~~~ 451 (535)
...+ ......+|...|++||.-. +...+...|.|.|||++++|+.| +.||..-........ . ...
T Consensus 167 ~~ng------~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia 240 (637)
T COG4248 167 NANG------TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIA 240 (637)
T ss_pred ccCC------ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhh
Confidence 3222 2233456888999999654 33457789999999999999996 889864321111000 0 001
Q ss_pred cccccCcccccccCCCCCCCCCCCH-HHHHHHHHHHHHhccc--CCCCCCCHHHHHHHHhhhCCCccc
Q 009404 452 TPRLQDSGTVISELPDPRLKGDFPK-EEMQIMAYLAKECLQL--DPDARPTMSEVVQILSTIAPDKSR 516 (535)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~li~~cl~~--dP~~RPt~~evl~~L~~l~~~~~~ 516 (535)
...+...++.-.-...+ ....|- -.+..+..+..+|+.. ++.-|||++-++..|..+.++..+
T Consensus 241 ~g~f~ya~~~~~g~~p~--P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~ 306 (637)
T COG4248 241 HGRFAYASDQRRGLKPP--PRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKK 306 (637)
T ss_pred cceeeechhccCCCCCC--CCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhh
Confidence 11111111000000000 111221 2234566777888854 367899999999999999877654
No 450
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.96 E-value=6.5e-09 Score=96.17 Aligned_cols=126 Identities=26% Similarity=0.285 Sum_probs=81.4
Q ss_pred EEEEEEEcCCcEEEEEEeccCCC------------CC--------h-----hHHHHHHHHHHhccCCC--Cccceeeeee
Q 009404 240 YVYRGQLTDGRIVAVKRFKTQGG------------PN--------A-----DSVFLTEVDMLSRLHHC--HVVPLVGYCS 292 (535)
Q Consensus 240 ~Vy~~~~~~g~~vaVK~l~~~~~------------~~--------~-----~~~~~~Ei~~l~~l~H~--niv~l~g~~~ 292 (535)
.||.|...+|..+|||..+.... .. . .....+|.+.|.++..- ++++++.+-.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~~ 80 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYNR 80 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEET
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEeC
Confidence 48999998899999999864311 00 0 11256799999999655 5677775522
Q ss_pred ecccCcceEEEEEecCC--CCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHH-HHhcCCCCeeecCCCCCCEEeCCCCc
Q 009404 293 EFRGKRAMRLLVFEFMP--NGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEY-LHEAAAPRILHRDIKSSNILLDENLN 369 (535)
Q Consensus 293 ~~~~~~~~~~lV~e~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~-LH~~~~~~i~H~DLk~~NILl~~~~~ 369 (535)
..|||||++ +..+....... ++......++.+++..+.. +|..| |+|+||.+.|||++++ .
T Consensus 81 --------~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~ 144 (188)
T PF01163_consen 81 --------NVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-K 144 (188)
T ss_dssp --------TEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-C
T ss_pred --------CEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-e
Confidence 289999998 55554433221 1133456677777775555 56887 9999999999999988 9
Q ss_pred EEEEecCCcccc
Q 009404 370 AKITDLGMAKRL 381 (535)
Q Consensus 370 vkL~DFGla~~~ 381 (535)
+.|+|||.+...
T Consensus 145 ~~iIDf~qav~~ 156 (188)
T PF01163_consen 145 VYIIDFGQAVDS 156 (188)
T ss_dssp EEE--GTTEEET
T ss_pred EEEEecCcceec
Confidence 999999988654
No 451
>PRK09902 hypothetical protein; Provisional
Probab=98.86 E-value=8.4e-08 Score=89.39 Aligned_cols=145 Identities=21% Similarity=0.122 Sum_probs=109.1
Q ss_pred cceeCceEEEEEEEcCCcEEEEEEeccCC-----CCChhHHHHHHHHHHhccC--CCCccceeeeeeecccCcceEEEEE
Q 009404 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQG-----GPNADSVFLTEVDMLSRLH--HCHVVPLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 233 LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~-----~~~~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~~~~~lV~ 305 (535)
-|+||-+.|++..+. |..+-+|+-.... .+.....|.+|+..|..+. .-.+++++..-....+....-+||+
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 467888999998875 5579999875221 1345567999999999984 3335555533223333345678999
Q ss_pred ecCCC-CCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc--EEEEecCCcccc
Q 009404 306 EFMPN-GNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLN--AKITDLGMAKRL 381 (535)
Q Consensus 306 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~--vkL~DFGla~~~ 381 (535)
|-+++ -+|.+++......+.+...+..+..++++.++-||+.+ +.|+|+.+.|||++.++. ++++||.-++..
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 97753 58999986644445677888899999999999999999 999999999999986666 999999877643
No 452
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.84 E-value=4.6e-08 Score=92.57 Aligned_cols=128 Identities=27% Similarity=0.258 Sum_probs=95.0
Q ss_pred CcEEEEEEeccCCCC------ChhHHHHHHHHHHhccC--CCCccceeeeeeecccCcceEEEEEecCCCC-CHHHhhhh
Q 009404 249 GRIVAVKRFKTQGGP------NADSVFLTEVDMLSRLH--HCHVVPLVGYCSEFRGKRAMRLLVFEFMPNG-NLRDCLDG 319 (535)
Q Consensus 249 g~~vaVK~l~~~~~~------~~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~~~~~lV~e~~~~g-sL~~~l~~ 319 (535)
++.+.+|.+...... -......+|...+..+. .-..++.+++.....+.....++|+|++++. +|.+++..
T Consensus 32 ~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~ 111 (206)
T PF06293_consen 32 GRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQ 111 (206)
T ss_pred ceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHh
Confidence 556666654322111 12234778888888874 3345677777765444334568999999874 89999876
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC---cEEEEecCCcccc
Q 009404 320 VLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENL---NAKITDLGMAKRL 381 (535)
Q Consensus 320 ~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~---~vkL~DFGla~~~ 381 (535)
... ++......++.+++..++-||+.| |+|+|+++.|||++.+. .+.++||+.++..
T Consensus 112 ~~~--~~~~~~~~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 112 WEQ--LDPSQRRELLRALARLIAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred hcc--cchhhHHHHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 322 566778899999999999999999 99999999999999887 8999999987653
No 453
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.81 E-value=3.6e-08 Score=93.94 Aligned_cols=134 Identities=22% Similarity=0.191 Sum_probs=96.7
Q ss_pred CCCcccceeCceEEEEEEEcCCcEEEEEEeccCCC---------------------CChhHHHHHHHHHHhccCCC--Cc
Q 009404 228 SGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGG---------------------PNADSVFLTEVDMLSRLHHC--HV 284 (535)
Q Consensus 228 ~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~---------------------~~~~~~~~~Ei~~l~~l~H~--ni 284 (535)
.+...||-|--+.||.|...+|.++|||.-+...+ ...+....+|.++|..|... .+
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 34578999999999999999999999996542210 01112256799999999655 77
Q ss_pred cceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 009404 285 VPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364 (535)
Q Consensus 285 v~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl 364 (535)
.+.+++- ...+||||+++-.|...- ++....-.++..|++-+.-+-..| ++|+|+++-||++
T Consensus 174 P~P~~~n--------RHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV 235 (304)
T COG0478 174 PKPIAWN--------RHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILV 235 (304)
T ss_pred CCccccc--------cceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEE
Confidence 7777542 238999999887776432 122333445555555555555677 9999999999999
Q ss_pred CCCCcEEEEecCCcc
Q 009404 365 DENLNAKITDLGMAK 379 (535)
Q Consensus 365 ~~~~~vkL~DFGla~ 379 (535)
++||.+.++||--+.
T Consensus 236 ~~dg~~~vIDwPQ~v 250 (304)
T COG0478 236 TEDGDIVVIDWPQAV 250 (304)
T ss_pred ecCCCEEEEeCcccc
Confidence 999999999996443
No 454
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.67 E-value=1.2e-07 Score=100.48 Aligned_cols=154 Identities=20% Similarity=0.235 Sum_probs=101.5
Q ss_pred HHHHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChh---------------------------------
Q 009404 220 LEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNAD--------------------------------- 266 (535)
Q Consensus 220 l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~--------------------------------- 266 (535)
++.....|+. +-|+.++-|.||+|++++|+.||||+.+..-.....
T Consensus 121 iee~F~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~ 199 (517)
T COG0661 121 IEELFSEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFE 199 (517)
T ss_pred HHHHHHHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHH
Confidence 4444555653 679999999999999999999999998754211000
Q ss_pred ------HHHHHHHHHHhcc----CCCCccceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHH
Q 009404 267 ------SVFLTEVDMLSRL----HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336 (535)
Q Consensus 267 ------~~~~~Ei~~l~~l----~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 336 (535)
-++.+|...+.++ +...-+++-.++++... ...|+|||++|-.+.+...-.. .+++...+.....+
T Consensus 200 ~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~---~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~ 275 (517)
T COG0661 200 KRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTT---RRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVR 275 (517)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccC---CcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHH
Confidence 0134455555544 23333444455554332 3489999999999998843222 44554443333333
Q ss_pred HHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCcccccc
Q 009404 337 AARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKA 383 (535)
Q Consensus 337 ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~ 383 (535)
+. +..+-..| ++|.|..|.||+++.++.+.+.|||+...+..
T Consensus 276 ~f--~~q~~~dg---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 276 AF--LRQLLRDG---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HH--HHHHHhcC---ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 22 22333356 99999999999999999999999999876643
No 455
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.66 E-value=9.3e-09 Score=108.76 Aligned_cols=153 Identities=22% Similarity=0.323 Sum_probs=102.1
Q ss_pred HHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccC-CCCCC---CCCCCccccCccccCccccccC
Q 009404 336 GAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKAD-GLPSC---SSSPARMQGTFGYFAPEYAMVG 411 (535)
Q Consensus 336 ~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~-~~~~~---~~~~~~~~gt~~y~aPE~~~~~ 411 (535)
+++.||.|+|... +++|++|.|++|.++.++..||+.|+.+...... .++.. ...+...+-...|.|||++...
T Consensus 107 ~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 4458999999765 6999999999999999999999999987655431 11110 1112223345679999999998
Q ss_pred CCCccchHHHHHHHHHHHHhCCCCCCCcc-ccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhc
Q 009404 412 RASLMSDVFSFGVVLLELITGRQPIHRSI-TKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECL 490 (535)
Q Consensus 412 ~~s~ksDVwSlGvil~eLltG~~P~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl 490 (535)
..+.++|+||+|+++|-+..|+.+..... ........ ...+..-...+..+.+.++.+=+.+++
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~---------------~~~~~~~~~~~s~~~p~el~~~l~k~l 249 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS---------------RNLLNAGAFGYSNNLPSELRESLKKLL 249 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhh---------------hcccccccccccccCcHHHHHHHHHHh
Confidence 89999999999999999996555432221 11111100 000000011122334445777788899
Q ss_pred ccCCCCCCCHHHHHH
Q 009404 491 QLDPDARPTMSEVVQ 505 (535)
Q Consensus 491 ~~dP~~RPt~~evl~ 505 (535)
..++.-||++.++..
T Consensus 250 ~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 250 NGDSAVRPTLDLLLS 264 (700)
T ss_pred cCCcccCcchhhhhc
Confidence 999999998877654
No 456
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.48 E-value=8.2e-07 Score=93.98 Aligned_cols=153 Identities=18% Similarity=0.193 Sum_probs=98.7
Q ss_pred HHHHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChh---------------------------------
Q 009404 220 LEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNAD--------------------------------- 266 (535)
Q Consensus 220 l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~--------------------------------- 266 (535)
++.....|+ .+.||.-+.|.||+|++++|+.||||+.+..-.....
T Consensus 157 ie~if~~f~-~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L 235 (538)
T KOG1235|consen 157 IEDIFSEFD-EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSL 235 (538)
T ss_pred HHHHHHhcC-cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhh
Confidence 344445555 3679999999999999999999999998754221100
Q ss_pred ---HHHHHHHHHHhcc----CCCC---ccceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHH
Q 009404 267 ---SVFLTEVDMLSRL----HHCH---VVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIG 336 (535)
Q Consensus 267 ---~~~~~Ei~~l~~l----~H~n---iv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 336 (535)
-+|.+|++-..++ .|-+ -|.+-.++++. ...+.|+||||+|..+.|.-. ....+++...+..-+.+
T Consensus 236 ~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~---st~RVLtME~~~G~~i~Dl~~-i~~~gi~~~~i~~~l~~ 311 (538)
T KOG1235|consen 236 PQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDL---STKRVLTMEYVDGIKINDLDA-IDKRGISPHDILNKLVE 311 (538)
T ss_pred HhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhc---CcceEEEEEecCCccCCCHHH-HHHcCCCHHHHHHHHHH
Confidence 0244555443333 4555 12233333432 225699999999998876531 12245666655555554
Q ss_pred HHHHHHHHHhcCCCCeeecCCCCCCEEeC----CCCcEEEEecCCccccc
Q 009404 337 AARGLEYLHEAAAPRILHRDIKSSNILLD----ENLNAKITDLGMAKRLK 382 (535)
Q Consensus 337 ia~~L~~LH~~~~~~i~H~DLk~~NILl~----~~~~vkL~DFGla~~~~ 382 (535)
+..-+-+ ..| ++|.|=.|.||+++ .++.+.+.|||+...+.
T Consensus 312 ~~~~qIf--~~G---ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 312 AYLEQIF--KTG---FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred HHHHHHH--hcC---CccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 4332222 235 99999999999998 36789999999987654
No 457
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.41 E-value=4.9e-06 Score=78.83 Aligned_cols=154 Identities=21% Similarity=0.284 Sum_probs=105.5
Q ss_pred eeCHHHHHHHhcCCCCCcccc---eeCceEEEEEEEcCCcEEEEEEeccCCCCC------------------hhHH----
Q 009404 214 RFSYSALEHATDKFSGSNIVG---QGGSSYVYRGQLTDGRIVAVKRFKTQGGPN------------------ADSV---- 268 (535)
Q Consensus 214 ~~~~~~l~~~~~~f~~~~~LG---~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~------------------~~~~---- 268 (535)
..++..+..+.++..+....| .|.-+.||+|...++..+|||+++.....- ....
T Consensus 34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~ 113 (268)
T COG1718 34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA 113 (268)
T ss_pred hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence 345666777777777766655 577778999998889999999997542110 0000
Q ss_pred -HHHHHHHHhcc--CCCCccceeeeeeecccCcceEEEEEecCCCCC-HHHhhhhcccCCCCHHHHHHHHHHHHHHHHHH
Q 009404 269 -FLTEVDMLSRL--HHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGN-LRDCLDGVLVEGMNWDTRVAIAIGAARGLEYL 344 (535)
Q Consensus 269 -~~~Ei~~l~~l--~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~gs-L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~L 344 (535)
-.+|+.-|.++ .+-.+.+.+++... .|||||+.... -.-.|.. -++.......+..++++.|.-|
T Consensus 114 W~~kEf~NL~R~~eAGVrvP~Pi~~~~n--------VLvMEfIg~~g~pAP~LkD---v~~e~~e~~~~~~~~v~~~~~l 182 (268)
T COG1718 114 WARKEFRNLKRAYEAGVRVPEPIAFRNN--------VLVMEFIGDDGLPAPRLKD---VPLELEEAEGLYEDVVEYMRRL 182 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCceeecCC--------eEEEEeccCCCCCCCCccc---CCcCchhHHHHHHHHHHHHHHH
Confidence 23577777777 35566677765433 89999995531 1111111 1123335677788888888888
Q ss_pred Hh-cCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 345 HE-AAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 345 H~-~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
-. .+ ++|+||+.-|||+. ++.+.|+|||-|....
T Consensus 183 ~~~a~---LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 183 YKEAG---LVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred HHhcC---cccccchhhheEEE-CCeEEEEECccccccC
Confidence 77 55 99999999999999 7799999999886543
No 458
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.28 E-value=1.3e-05 Score=76.96 Aligned_cols=138 Identities=13% Similarity=0.172 Sum_probs=80.9
Q ss_pred cccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCC--ccceeeeeeecccCcceEEEEEecC
Q 009404 231 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCH--VVPLVGYCSEFRGKRAMRLLVFEFM 308 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~n--iv~l~g~~~~~~~~~~~~~lV~e~~ 308 (535)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..-. +.+.+++... .....+|||++
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~---~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~----~~~~glv~e~i 76 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF---DKETIKREFDASRKVFSLGIPTPHPFDLVED----GGRLGLIYELI 76 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC---CHHHHHHHHHHHHHHHHcCCCCCceEEEEec----CCeeeeeeeec
Confidence 46899999999984 24457888876533 2233688999999885433 4566766544 22347899999
Q ss_pred CCCC-HHHhh---------------------hhcccCCCCHHHHH-HHHH----------HHHH-HHHHHHh-cCCCCee
Q 009404 309 PNGN-LRDCL---------------------DGVLVEGMNWDTRV-AIAI----------GAAR-GLEYLHE-AAAPRIL 353 (535)
Q Consensus 309 ~~gs-L~~~l---------------------~~~~~~~l~~~~~~-~i~~----------~ia~-~L~~LH~-~~~~~i~ 353 (535)
+|.+ +...+ +............. .+.. .+.. ...+|.. ...+.++
T Consensus 77 ~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 156 (226)
T TIGR02172 77 VGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCL 156 (226)
T ss_pred CCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceE
Confidence 8863 21111 11000111111100 0000 0111 1222221 1224578
Q ss_pred ecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 354 HRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 354 H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
|+|+.|.||++++++ +.|+||+.+.
T Consensus 157 HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 157 HGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred ecCCCCCcEEEcCCC-cEEEechhcC
Confidence 999999999999887 9999999775
No 459
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.28 E-value=4.8e-06 Score=79.74 Aligned_cols=145 Identities=21% Similarity=0.239 Sum_probs=85.6
Q ss_pred cccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCC--CccceeeeeeecccCcceEEEEEecC
Q 009404 231 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHC--HVVPLVGYCSEFRGKRAMRLLVFEFM 308 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~--niv~l~g~~~~~~~~~~~~~lV~e~~ 308 (535)
+.|+.|..+.||+....+ ..+++|..... .....+.+|..+++.+... .+.+++.+..... .....+++|+++
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~-~~~~~~~~~~~i 77 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP---DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDE-FNGFPYLLMEYI 77 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETE-ETSEEEEEEEEE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCCCCceEEeeccccc-ccccceEEEEEe
Confidence 568899999999999876 68999997643 2344578899999888433 3567776553322 233468999999
Q ss_pred CCCCHHH----------------hh---hhcc--cCCCCHHH---------HHHH------------HHHHHH-HHHHHH
Q 009404 309 PNGNLRD----------------CL---DGVL--VEGMNWDT---------RVAI------------AIGAAR-GLEYLH 345 (535)
Q Consensus 309 ~~gsL~~----------------~l---~~~~--~~~l~~~~---------~~~i------------~~~ia~-~L~~LH 345 (535)
++..+.. .+ +... ...+.+.. .... ...+.+ .+..++
T Consensus 78 ~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (239)
T PF01636_consen 78 PGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELE 157 (239)
T ss_dssp SSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHH
Confidence 9988877 11 1110 01111110 0000 111222 333443
Q ss_pred hc----CCCCeeecCCCCCCEEeC-CCCcEEEEecCCccc
Q 009404 346 EA----AAPRILHRDIKSSNILLD-ENLNAKITDLGMAKR 380 (535)
Q Consensus 346 ~~----~~~~i~H~DLk~~NILl~-~~~~vkL~DFGla~~ 380 (535)
+. ....++|+|+.+.|||++ +++.+-|+||+.+..
T Consensus 158 ~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 158 ALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred hhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 21 334599999999999999 666667999987753
No 460
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.26 E-value=8.1e-06 Score=73.24 Aligned_cols=129 Identities=19% Similarity=0.179 Sum_probs=89.6
Q ss_pred CCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCcc-ceeeeeeecccCcceEEEEEec
Q 009404 229 GSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV-PLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 229 ~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv-~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
..+.|++|++|.||++.+. |..+|+|+-+.++. +..+..|+++|..++-.++- +++.|-.+ ++.|||
T Consensus 26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~---r~~l~kEakiLeil~g~~~~p~vy~yg~~--------~i~me~ 93 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRDSP---RRNLEKEAKILEILAGEGVTPEVYFYGED--------FIRMEY 93 (201)
T ss_pred hhhhhhcccccEEEEeecc-CceEEEEEecCCcc---hhhHHHHHHHHHHhhhcCCCceEEEechh--------hhhhhh
Confidence 3577999999999999997 55899998876543 34488999999999776665 55555333 566999
Q ss_pred CCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC-CCCEEeCCCCcEEEEecCCcccc
Q 009404 308 MPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIK-SSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 308 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk-~~NILl~~~~~vkL~DFGla~~~ 381 (535)
+.|-+|.+.-... +..+... +++.---|-..| |-|+.|. |...+|..+..+.|+||..|...
T Consensus 94 i~G~~L~~~~~~~-----~rk~l~~----vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 94 IDGRPLGKLEIGG-----DRKHLLR----VLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred hcCcchhhhhhcc-----cHHHHHH----HHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 9888887765421 2333333 344433344556 9999997 44444444449999999988743
No 461
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.20 E-value=2.9e-05 Score=72.88 Aligned_cols=144 Identities=14% Similarity=0.171 Sum_probs=92.3
Q ss_pred HHhcCCCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhH--------HHHHHHHHHhccCCC---Cccceeee
Q 009404 222 HATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADS--------VFLTEVDMLSRLHHC---HVVPLVGY 290 (535)
Q Consensus 222 ~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~--------~~~~Ei~~l~~l~H~---niv~l~g~ 290 (535)
....+|...+++-......|.+-.. +|..+++|..+.......+. ...+.+..+..+... ....++.+
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 3456777778888777777877776 47889999887654221111 022344444444322 22232222
Q ss_pred eeeccc-CcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc
Q 009404 291 CSEFRG-KRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLN 369 (535)
Q Consensus 291 ~~~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~ 369 (535)
...... -....+++|||++|..|.++.. ++. .++..+++++.-||+.| ++|+|..|.|++++++ .
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~-~ 172 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNN-G 172 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECC-c
Confidence 221111 1123468999999988876542 222 24566778899999999 9999999999999966 5
Q ss_pred EEEEecCCccc
Q 009404 370 AKITDLGMAKR 380 (535)
Q Consensus 370 vkL~DFGla~~ 380 (535)
++++||+..+.
T Consensus 173 i~iID~~~k~~ 183 (229)
T PF06176_consen 173 IRIIDTQGKRM 183 (229)
T ss_pred EEEEECccccc
Confidence 99999987653
No 462
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.17 E-value=8.2e-06 Score=75.76 Aligned_cols=103 Identities=22% Similarity=0.265 Sum_probs=82.9
Q ss_pred HHHHHHHhccCC-CCccceeeeeeecccCcceEEEEEecCCCCCHHHh---hhhcccCCCCHHHHHHHHHHHHHHHHHHH
Q 009404 270 LTEVDMLSRLHH-CHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDC---LDGVLVEGMNWDTRVAIAIGAARGLEYLH 345 (535)
Q Consensus 270 ~~Ei~~l~~l~H-~niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~---l~~~~~~~l~~~~~~~i~~~ia~~L~~LH 345 (535)
..|.-+|+.+++ +++++++|+|-. +++.||.+.+++... +... ...+|..+.+||.++++.+.+|+
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~--------~~v~E~~~~~~~~~~~~~l~~~--~~~~w~~R~~iA~~lL~~l~~l~ 76 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR--------FYVVEYVGAGSLYGIYRPLSQF--LQSPWEQRAKIALQLLELLEELD 76 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC--------EEEEEeecCccccccccccccc--cccCHHHHHHHHHHHHHHHHHHh
Confidence 457888888865 699999999965 789999987766421 1111 23689999999999999999999
Q ss_pred hcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccc
Q 009404 346 EAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLK 382 (535)
Q Consensus 346 ~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~ 382 (535)
+.....+.-.|++++|+-+++++++|++|...+....
T Consensus 77 ~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 77 HGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred cCCCCcEEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence 8544458899999999999999999999998765543
No 463
>PLN02876 acyl-CoA dehydrogenase
Probab=98.11 E-value=4.1e-05 Score=87.41 Aligned_cols=83 Identities=13% Similarity=0.215 Sum_probs=58.4
Q ss_pred CcccceeCceEEEEEEEcCC---cEEEEEEeccCCCCChhHHHHHHHHHHhccC-CCCc--cceeeeeeecccCcceEEE
Q 009404 230 SNIVGQGGSSYVYRGQLTDG---RIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HCHV--VPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~~g---~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~-H~ni--v~l~g~~~~~~~~~~~~~l 303 (535)
.+.++.|.+..+|+....++ ..+++|+............+.+|+++|+.+. |.++ .++++++.+... ....|+
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v-~G~~fl 121 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASV-IGTAFY 121 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCc-CCCceE
Confidence 46688899999999887654 4678887654332233345889999999995 6665 788887765322 124589
Q ss_pred EEecCCCCCH
Q 009404 304 VFEFMPNGNL 313 (535)
Q Consensus 304 V~e~~~~gsL 313 (535)
||||+++..+
T Consensus 122 VME~v~G~~~ 131 (822)
T PLN02876 122 IMEYLEGRIF 131 (822)
T ss_pred EEEecCCccc
Confidence 9999987643
No 464
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.10 E-value=4.3e-05 Score=74.21 Aligned_cols=138 Identities=22% Similarity=0.170 Sum_probs=82.1
Q ss_pred cceeCc-eEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccC-CCCccceeeeeeecccCcceEEEEEecCCC
Q 009404 233 VGQGGS-SYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH-HCHVVPLVGYCSEFRGKRAMRLLVFEFMPN 310 (535)
Q Consensus 233 LG~G~f-G~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~~~~lV~e~~~~ 310 (535)
|-.|.+ ..||+.... +..+.||+..... .....+|+++++.+. +--+.+++++.... ...++|||+++|
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~----~~~~lv~e~i~G 76 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDD----GRAWLLTSAVPG 76 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecC----CccEEEEEeeCC
Confidence 444555 779999764 4778888876542 223678999988883 44455677665432 235899999999
Q ss_pred CCHHHhh-------------------hhcccC--CCC--HHHHHHHHH--------------------HHHHHHHHHHh-
Q 009404 311 GNLRDCL-------------------DGVLVE--GMN--WDTRVAIAI--------------------GAARGLEYLHE- 346 (535)
Q Consensus 311 gsL~~~l-------------------~~~~~~--~l~--~~~~~~i~~--------------------~ia~~L~~LH~- 346 (535)
.+|.... +..... .+. ......... .+...+..|-.
T Consensus 77 ~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (244)
T cd05150 77 VPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEAT 156 (244)
T ss_pred ccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhh
Confidence 8776432 111000 111 000000000 01111222211
Q ss_pred ---cCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 347 ---AAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 347 ---~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
...+.++|+|+.|.|||++++..+.|+||+.+.
T Consensus 157 ~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 157 RPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred CCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 123459999999999999998778899998764
No 465
>PRK10593 hypothetical protein; Provisional
Probab=98.01 E-value=0.00016 Score=72.37 Aligned_cols=82 Identities=12% Similarity=0.072 Sum_probs=57.6
Q ss_pred CCCCcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCC---CCccceeeeeeecccCcceEEE
Q 009404 227 FSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHH---CHVVPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 227 f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H---~niv~l~g~~~~~~~~~~~~~l 303 (535)
....+.||.|..+.||+....+++ +++|..+... ....|..|.+.|+.+.- -.+.++++++..... ....++
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~~---~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~-~g~~~L 90 (297)
T PRK10593 16 LSRVECISEQPYAALWALYDSQGN-PMPLMARSFS---TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQS-PGPDVL 90 (297)
T ss_pred hheeeecCCccceeEEEEEcCCCC-EEEEEecccc---cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCc-CCCeEE
Confidence 334567999999999999876564 7777754311 12358899999998843 367788888754322 234599
Q ss_pred EEecCCCCCH
Q 009404 304 VFEFMPNGNL 313 (535)
Q Consensus 304 V~e~~~~gsL 313 (535)
|||+++++++
T Consensus 91 VmE~i~G~~~ 100 (297)
T PRK10593 91 LLERLRGVSV 100 (297)
T ss_pred EEeccCCEec
Confidence 9999998765
No 466
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.90 E-value=1.4e-06 Score=91.52 Aligned_cols=182 Identities=17% Similarity=0.153 Sum_probs=127.8
Q ss_pred CcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCC-ccceeeeeeecccCcceEEEEEecC
Q 009404 230 SNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCH-VVPLVGYCSEFRGKRAMRLLVFEFM 308 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~n-iv~l~g~~~~~~~~~~~~~lV~e~~ 308 (535)
.+-.++|+.++++|.+....+...++.+... ....-++++|.+++||| .++.+ .+.+ .+...+++++++
T Consensus 247 fh~fvK~altknpKkRptaeklL~h~fvs~~------l~~rl~~eLLdK~n~P~~~v~~~---~d~~-~E~~~~i~~~i~ 316 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQHPFVSQT------LSRRLAIELLDKVNNPNPVVRYL---EDYD-GEDYLWIPMRIC 316 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhheeceeeccc------hhhHHHHHHHHHccCCCCccccc---ccCC-cccccchhhhhh
Confidence 3457899999999987654444445555432 22456889999999999 33333 3322 245678999999
Q ss_pred CCC-CHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCC
Q 009404 309 PNG-NLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLP 387 (535)
Q Consensus 309 ~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~ 387 (535)
..+ +-..-... ....+...+...+.+.-++++++||+.- =+|+| ||+..+ ...+.+||+....+....
T Consensus 317 s~~rs~~~~~~~-se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-- 385 (829)
T KOG0576|consen 317 STGRSSALEMTV-SEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-- 385 (829)
T ss_pred cCCccccccCCh-hhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc--
Confidence 777 22211111 1122445556667777889999999874 48998 887776 588999999988776532
Q ss_pred CCCCCCCccccCccccCccccccCCCCccchHHHHHHHHHHHHhCCCCC
Q 009404 388 SCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGVVLLELITGRQPI 436 (535)
Q Consensus 388 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGvil~eLltG~~P~ 436 (535)
......+|+.++|||......+....|+|++|+--.++--|.+|-
T Consensus 386 ----~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 386 ----KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred ----ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 345677899999999999999999999999998766666665553
No 467
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.89 E-value=0.0002 Score=69.06 Aligned_cols=73 Identities=15% Similarity=0.137 Sum_probs=48.0
Q ss_pred cccceeCceEEEEEEEcC--CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCc-cceeeeeeecccCcceEEEEEec
Q 009404 231 NIVGQGGSSYVYRGQLTD--GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHV-VPLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~--g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
+.|..|-...+|+....+ +..+++|+........ ....+|+.+++.+...++ +++++... -.++|||
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~--~d~~~E~~~~~~l~~~gl~P~v~~~~~--------~~~l~e~ 73 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELI--IDRERELRIHKLLSKHGLAPKLYATFQ--------NGLIYEF 73 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccce--ecHHHHHHHHHHHHhCCCCCeEEEEeC--------CcEEEEe
Confidence 457778888999998764 6789999776432211 123578888888854334 44443321 1479999
Q ss_pred CCCCCH
Q 009404 308 MPNGNL 313 (535)
Q Consensus 308 ~~~gsL 313 (535)
+++.++
T Consensus 74 i~G~~l 79 (235)
T cd05157 74 IPGRTL 79 (235)
T ss_pred eCCCcC
Confidence 988765
No 468
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.88 E-value=0.0002 Score=66.54 Aligned_cols=130 Identities=25% Similarity=0.397 Sum_probs=91.3
Q ss_pred cCCCCCcccceeCc-eEEEEEEEcCCcEEEEEEecc---CCC-------C----------ChhHHHHHHHHHHhcc---C
Q 009404 225 DKFSGSNIVGQGGS-SYVYRGQLTDGRIVAVKRFKT---QGG-------P----------NADSVFLTEVDMLSRL---H 280 (535)
Q Consensus 225 ~~f~~~~~LG~G~f-G~Vy~~~~~~g~~vaVK~l~~---~~~-------~----------~~~~~~~~Ei~~l~~l---~ 280 (535)
.+++..+.||.|.. |.||+++.. |+.+|+|++.. ... . ....-|..|.++..+| .
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 67777899999999 999999995 78999999431 100 0 0011377888887777 3
Q ss_pred CCCc--cceeeeeeecc--------------cCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHH
Q 009404 281 HCHV--VPLVGYCSEFR--------------GKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYL 344 (535)
Q Consensus 281 H~ni--v~l~g~~~~~~--------------~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~L 344 (535)
+.++ ++.+||..-.. .......||.||.+... .+. ..-+.+|.+-|..+
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~----~~~~~~~~~dl~~~ 180 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQ----IRDIPQMLRDLKIL 180 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccc----hhHHHHHHHHHHHH
Confidence 5566 89999984431 11223467888876543 122 23355677778889
Q ss_pred HhcCCCCeeecCCCCCCEEeCCCCcEEEEecCCc
Q 009404 345 HEAAAPRILHRDIKSSNILLDENLNAKITDLGMA 378 (535)
Q Consensus 345 H~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla 378 (535)
|..+ |+-+|+++.|.. .-+|+|||.+
T Consensus 181 ~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 181 HKLG---IVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHCC---eeeccCcccccc-----CCEEEecccC
Confidence 9998 999999999997 3489999864
No 469
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.86 E-value=4.2e-05 Score=85.86 Aligned_cols=203 Identities=21% Similarity=0.172 Sum_probs=140.2
Q ss_pred HHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 009404 269 FLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348 (535)
Q Consensus 269 ~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ 348 (535)
-..|.+.+..+.|+|++.+++|-.+....+....+..++++..++...+... ...+..+...+..++.+||.|+|+..
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v--~~i~~~~~r~~~~~~~~GL~~~h~~~ 306 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV--GSIPLETLRILHQKLLEGLAYLHSLS 306 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc--cccCHHHHHHHHHHHhhhHHHHHHhc
Confidence 3456677888899999999998876544332334566888888888888654 45788888899999999999999985
Q ss_pred CCCeeecCCCCC---CEEeCCCCcEEEE--ecCCccccccCCCCCCCCCCCccccCccccCccccccCCC--CccchHHH
Q 009404 349 APRILHRDIKSS---NILLDENLNAKIT--DLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRA--SLMSDVFS 421 (535)
Q Consensus 349 ~~~i~H~DLk~~---NILl~~~~~vkL~--DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--s~ksDVwS 421 (535)
..|.-|..+ +..++..+.+.++ ||+.+.......... ...-+..+.+||......+ ....|+|.
T Consensus 307 ---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~------~~~~~~~~~~~e~~~~~~~~~~r~~dL~~ 377 (1351)
T KOG1035|consen 307 ---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF------SDLLAEIRNADEDLKENTAKKSRLTDLWC 377 (1351)
T ss_pred ---cceeEEecccccccccCccceeecchhhhcccccCCCcccch------hhcCccccccccccccccchhhhhhHHHH
Confidence 666666655 5555677777777 999888776543211 1123345778887765554 44579999
Q ss_pred HHHHHHHHHhCCCCCCCccccccchhhhhccccccCcccccccCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 009404 422 FGVVLLELITGRQPIHRSITKGEESLVLWATPRLQDSGTVISELPDPRLKGDFPKEEMQIMAYLAKECLQLDPDARPTMS 501 (535)
Q Consensus 422 lGvil~eLltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 501 (535)
+|.++..+..|..+-..... +..-+...... .+.+....|+..++++|+++.
T Consensus 378 lgll~~~~~~~~~i~~~~~~------------------------~~~~l~~~~~~----~~~d~~~~~~~~~~~~Rl~~~ 429 (1351)
T KOG1035|consen 378 LGLLLLQLSQGEDISEKSAV------------------------PVSLLDVLSTS----ELLDALPKCLDEDSEERLSAL 429 (1351)
T ss_pred HHHHHhhhhhcCcccccccc------------------------hhhhhccccch----hhhhhhhhhcchhhhhccchh
Confidence 99999999987655321110 00111111111 367788899999999999999
Q ss_pred HHHHHHhhh
Q 009404 502 EVVQILSTI 510 (535)
Q Consensus 502 evl~~L~~l 510 (535)
+++...-.-
T Consensus 430 ~ll~~~f~~ 438 (1351)
T KOG1035|consen 430 ELLTHPFLR 438 (1351)
T ss_pred hhhhchhcc
Confidence 999865433
No 470
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.84 E-value=0.00045 Score=64.56 Aligned_cols=130 Identities=21% Similarity=0.299 Sum_probs=86.1
Q ss_pred CCcccceeCceEEEEEEEcCCcEEEEEEeccCC---------------CCChhHHHHHHHHHHhccC------CCCccce
Q 009404 229 GSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQG---------------GPNADSVFLTEVDMLSRLH------HCHVVPL 287 (535)
Q Consensus 229 ~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~---------------~~~~~~~~~~Ei~~l~~l~------H~niv~l 287 (535)
....||+|+.-.||. +.+.....||+..... ......+..+|+.....+. +.+|.++
T Consensus 5 ~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 346799999999997 4445668889887654 1112344666766655554 8899999
Q ss_pred eeeeeecccCcceEEEEEecCCC------CCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 009404 288 VGYCSEFRGKRAMRLLVFEFMPN------GNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSN 361 (535)
Q Consensus 288 ~g~~~~~~~~~~~~~lV~e~~~~------gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~N 361 (535)
+|+.....+. -+|+|.+.+ -+|.+++.. ..++. .....+ -+-..||-+.+ |+.+||+|.|
T Consensus 83 ~G~veT~~G~----Glv~e~I~d~dG~~s~TL~~~l~~---~~~~~-~~~~~L---~~f~~~l~~~~---Iv~~dl~~~N 148 (199)
T PF10707_consen 83 YGFVETNLGL----GLVVELIRDADGNISPTLEDYLKE---GGLTE-ELRQAL---DEFKRYLLDHH---IVIRDLNPHN 148 (199)
T ss_pred eEEEecCCce----EEEEEEEECCCCCcCccHHHHHHc---CCccH-HHHHHH---HHHHHHHHHcC---CeecCCCccc
Confidence 9998875443 667776532 267777743 33554 333333 34456666776 9999999999
Q ss_pred EEeCCC---C-cEEEEe
Q 009404 362 ILLDEN---L-NAKITD 374 (535)
Q Consensus 362 ILl~~~---~-~vkL~D 374 (535)
|++..+ . .+.|+|
T Consensus 149 Iv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 149 IVVQRRDSGEFRLVLID 165 (199)
T ss_pred EEEEecCCCceEEEEEe
Confidence 999532 2 466666
No 471
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.80 E-value=0.001 Score=68.78 Aligned_cols=76 Identities=21% Similarity=0.195 Sum_probs=53.3
Q ss_pred cccceeCceEEEEEEEcCC-cEEEEEEeccC------CCCChhHHHHHHHHHHhccC---CCCccceeeeeeecccCcce
Q 009404 231 NIVGQGGSSYVYRGQLTDG-RIVAVKRFKTQ------GGPNADSVFLTEVDMLSRLH---HCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g-~~vaVK~l~~~------~~~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~~~ 300 (535)
+.||.|.+..||++...+| +.|+||.-... ..+...+.+..|.+.|..+. ..++++++.+.. ..
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~------~~ 105 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE------EL 105 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC------CC
Confidence 5689999999999999877 58999985421 11223345677888888762 346777887633 23
Q ss_pred EEEEEecCCCCC
Q 009404 301 RLLVFEFMPNGN 312 (535)
Q Consensus 301 ~~lV~e~~~~gs 312 (535)
.++||||+++..
T Consensus 106 ~~lVME~L~~~~ 117 (401)
T PRK09550 106 AVTVMEDLSDHK 117 (401)
T ss_pred CEEEEecCCCcc
Confidence 489999998643
No 472
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.77 E-value=0.00022 Score=68.87 Aligned_cols=76 Identities=17% Similarity=0.149 Sum_probs=45.2
Q ss_pred cccceeCce-EEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCC---CccceeeeeeecccCcceEEEEEe
Q 009404 231 NIVGQGGSS-YVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHC---HVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG-~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~---niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
+.|+.|+.. .||+. +..+++|..+.. .....+.+|.++|..+... .+.++++..... +.....+++|+
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~---~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~-~~~~~~~~l~~ 74 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSAA---GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPG-EGYPWPWSVYR 74 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCcc---chHHHHHHHHHHHHHHhccCCCCCCceeecCCCc-cCCCcceEEEE
Confidence 446766665 59975 234777765432 2234588999999888532 344444433221 11124488999
Q ss_pred cCCCCCHH
Q 009404 307 FMPNGNLR 314 (535)
Q Consensus 307 ~~~~gsL~ 314 (535)
+++|.++.
T Consensus 75 ~i~G~~l~ 82 (235)
T cd05155 75 WLEGETAT 82 (235)
T ss_pred eecCCCCC
Confidence 99987764
No 473
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.75 E-value=0.0002 Score=70.16 Aligned_cols=137 Identities=14% Similarity=0.067 Sum_probs=78.7
Q ss_pred cceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCc-cceeeeeeecccCcceEEEEEecCCCC
Q 009404 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHV-VPLVGYCSEFRGKRAMRLLVFEFMPNG 311 (535)
Q Consensus 233 LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~~~~~lV~e~~~~g 311 (535)
+..|-.+.+|+... ++..+++|+......... ....+|.++++.+....+ .++++... -++||||++|.
T Consensus 4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~i~~~~--------~~~v~e~i~G~ 73 (256)
T TIGR02721 4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKALG-VDRQREYQILQALSALGLAPKPILVNE--------HWLLVEWLEGE 73 (256)
T ss_pred CCCcCcCCeEEEEe-CCccEEEeeCCccccccc-CcHHHHHHHHHHHHhcCCCCceEEEeC--------CEEEEEeccCc
Confidence 45577889999874 567788987654322211 125788999998854333 45554422 16899999987
Q ss_pred CHHHh--------------h---hhcc--cCCCCHHHH-HHHHHH---------HHHHHHHHHhcC-----CCCeeecCC
Q 009404 312 NLRDC--------------L---DGVL--VEGMNWDTR-VAIAIG---------AARGLEYLHEAA-----APRILHRDI 357 (535)
Q Consensus 312 sL~~~--------------l---~~~~--~~~l~~~~~-~~i~~~---------ia~~L~~LH~~~-----~~~i~H~DL 357 (535)
.+... | +... ...++.... ..+..+ +...+..+-... .+.++|+|+
T Consensus 74 ~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl 153 (256)
T TIGR02721 74 VITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDV 153 (256)
T ss_pred ccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCC
Confidence 65421 1 1111 111222111 111111 111122222211 235899999
Q ss_pred CCCCEEeCCCCcEEEEecCCccc
Q 009404 358 KSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 358 k~~NILl~~~~~vkL~DFGla~~ 380 (535)
.|.||++++++ +.|+||..+..
T Consensus 154 ~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 154 HAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred CcCcEEEeCCC-CEEEeccccCc
Confidence 99999999876 78999988753
No 474
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.48 E-value=0.00083 Score=67.40 Aligned_cols=138 Identities=22% Similarity=0.271 Sum_probs=81.6
Q ss_pred ccceeCceEEEEEEEcC-------CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCc-cceeeeeeecccCcceEEE
Q 009404 232 IVGQGGSSYVYRGQLTD-------GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHV-VPLVGYCSEFRGKRAMRLL 303 (535)
Q Consensus 232 ~LG~G~fG~Vy~~~~~~-------g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~~~~~l 303 (535)
.|..|-...+|+....+ ++.+++|+...... ......+|.+++..+....+ .++++++.. .+
T Consensus 5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~--~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~--------~~ 74 (302)
T cd05156 5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE--LLIDRERELVVFARLSERNLGPKLYGIFPN--------GR 74 (302)
T ss_pred EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc--ceechHHHHHHHHHHHhCCCCCceEEEeCC--------Cc
Confidence 45557777899988755 57899999765432 11235788888888843333 455555431 35
Q ss_pred EEecCCCCCHHHh-----------------hhhcccC-------CCC--HHHHHH-------------------------
Q 009404 304 VFEFMPNGNLRDC-----------------LDGVLVE-------GMN--WDTRVA------------------------- 332 (535)
Q Consensus 304 V~e~~~~gsL~~~-----------------l~~~~~~-------~l~--~~~~~~------------------------- 332 (535)
|+||++|..+... ++..... ..+ |.....
T Consensus 75 v~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (302)
T cd05156 75 IEEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELS 154 (302)
T ss_pred hhheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHH
Confidence 8999988766431 1111111 000 111100
Q ss_pred -HHHHHHHHHHHHHh------cCCCCeeecCCCCCCEEeCCC----CcEEEEecCCcc
Q 009404 333 -IAIGAARGLEYLHE------AAAPRILHRDIKSSNILLDEN----LNAKITDLGMAK 379 (535)
Q Consensus 333 -i~~~ia~~L~~LH~------~~~~~i~H~DLk~~NILl~~~----~~vkL~DFGla~ 379 (535)
+...+..-+..|.. .....++|+|+.+.|||++++ +.+.++||..+.
T Consensus 155 ~~~~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 155 LFLEDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 11122233334432 123468999999999999974 789999999875
No 475
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.43 E-value=0.00089 Score=66.93 Aligned_cols=145 Identities=14% Similarity=0.102 Sum_probs=83.6
Q ss_pred CcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCC--ccceeeeeeec--ccCcceEEEEE
Q 009404 230 SNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCH--VVPLVGYCSEF--RGKRAMRLLVF 305 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~n--iv~l~g~~~~~--~~~~~~~~lV~ 305 (535)
.+.|..|....+|+....+ ..+++|+.... .......|++++..+.+.+ +.+++...... .......++|+
T Consensus 19 i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~ 93 (296)
T cd05153 19 FEGISAGIENTNYFVTTDS-GRYVLTLFEKV----SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALV 93 (296)
T ss_pred eecccCccccceEEEEeCC-CcEEEEEcCCC----ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEE
Confidence 4567778878999987654 46888987641 1233667888888884332 44544321100 00122458999
Q ss_pred ecCCCCCHHH----h-------h---hhcc----c-----CCCCHHHHH----------HHHHHHHHHHHHHHhc----C
Q 009404 306 EFMPNGNLRD----C-------L---DGVL----V-----EGMNWDTRV----------AIAIGAARGLEYLHEA----A 348 (535)
Q Consensus 306 e~~~~gsL~~----~-------l---~~~~----~-----~~l~~~~~~----------~i~~~ia~~L~~LH~~----~ 348 (535)
+|++|..+.. . | +... . ....|.... .....+..++.++... -
T Consensus 94 ~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 173 (296)
T cd05153 94 EFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDL 173 (296)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence 9999876532 1 1 1100 0 001222111 1112233445555431 1
Q ss_pred CCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 349 APRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 349 ~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
...++|+|+.|.|||++++..+.|+||+.+.
T Consensus 174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 174 PRGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 2359999999999999998777899998775
No 476
>PRK05231 homoserine kinase; Provisional
Probab=97.26 E-value=0.0052 Score=62.11 Aligned_cols=144 Identities=15% Similarity=0.160 Sum_probs=75.3
Q ss_pred cccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCC--ccceeeeeee--cccCcceEEEEEe
Q 009404 231 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCH--VVPLVGYCSE--FRGKRAMRLLVFE 306 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~n--iv~l~g~~~~--~~~~~~~~~lV~e 306 (535)
+.|+.|....+|+....+| .+++|+.. ... ......|+.++..|...+ +.+.+..... ........+++++
T Consensus 28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~-~~~---~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~ 102 (319)
T PRK05231 28 KGIAEGIENSNFFLTTTQG-EYVLTLFE-RLT---AEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVT 102 (319)
T ss_pred chhccccccceEEEEeCCC-cEEEEEec-cCC---hHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence 4566777789999887655 58889875 211 122344556666653222 3343321100 0001234689999
Q ss_pred cCCCCCHH-----------Hhh---hhccc---------CCCCH-HHHHH------------HH-HHHHHHHHHHHhc--
Q 009404 307 FMPNGNLR-----------DCL---DGVLV---------EGMNW-DTRVA------------IA-IGAARGLEYLHEA-- 347 (535)
Q Consensus 307 ~~~~gsL~-----------~~l---~~~~~---------~~l~~-~~~~~------------i~-~~ia~~L~~LH~~-- 347 (535)
|++|..+. +.| +.... ..+.| ..... .. ..+...++.+...
T Consensus 103 ~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 182 (319)
T PRK05231 103 FLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAW 182 (319)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccc
Confidence 99887542 111 11000 01112 11111 11 1111222333211
Q ss_pred --CCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 348 --AAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 348 --~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
-...++|+|+.+.|||++++...-|+||+.+.
T Consensus 183 ~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 183 PALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred ccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 12359999999999999977556899999875
No 477
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.25 E-value=0.00055 Score=67.32 Aligned_cols=144 Identities=17% Similarity=0.182 Sum_probs=99.1
Q ss_pred eCHHHHHHHhcC---CCCCcccceeCceEEEEEEEcCCcEEEEEEeccCC---------------CCCh------hHHHH
Q 009404 215 FSYSALEHATDK---FSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQG---------------GPNA------DSVFL 270 (535)
Q Consensus 215 ~~~~~l~~~~~~---f~~~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~---------------~~~~------~~~~~ 270 (535)
++|..|....++ ++..+.||-|.-+.||.+...+|++.++|.-+-.. .... +-...
T Consensus 79 yDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~ 158 (465)
T KOG2268|consen 79 YDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAAT 158 (465)
T ss_pred chHHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHH
Confidence 556666666544 46678999999999999999999999998543110 0011 11245
Q ss_pred HHHHHHhccC-CC-CccceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 009404 271 TEVDMLSRLH-HC-HVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAA 348 (535)
Q Consensus 271 ~Ei~~l~~l~-H~-niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ 348 (535)
+|...|+.|. |. -+.+.+++. ..++|||++.+-.|...-+- .+..+ +...+..-+.-|-.+|
T Consensus 159 kEfafmkaL~e~gfpVPkpiD~~--------RH~Vvmelv~g~Pl~~v~~v-----~d~~~---ly~~lm~~Iv~la~~G 222 (465)
T KOG2268|consen 159 KEFAFMKALYERGFPVPKPIDHN--------RHCVVMELVDGYPLRQVRHV-----EDPPT---LYDDLMGLIVRLANHG 222 (465)
T ss_pred HHHHHHHHHHHcCCCCCCccccc--------ceeeHHHhhcccceeeeeec-----CChHH---HHHHHHHHHHHHHHcC
Confidence 6888888883 33 345555543 33899999998888765321 22233 3334444455667777
Q ss_pred CCCeeecCCCCCCEEeCCCCcEEEEecCC
Q 009404 349 APRILHRDIKSSNILLDENLNAKITDLGM 377 (535)
Q Consensus 349 ~~~i~H~DLk~~NILl~~~~~vkL~DFGl 377 (535)
+||+|..-=||+++++..++++||--
T Consensus 223 ---lIHgDFNEFNimv~dd~~i~vIDFPQ 248 (465)
T KOG2268|consen 223 ---LIHGDFNEFNIMVKDDDKIVVIDFPQ 248 (465)
T ss_pred ---ceecccchheeEEecCCCEEEeechH
Confidence 99999999999999999999999954
No 478
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.13 E-value=0.009 Score=60.10 Aligned_cols=146 Identities=14% Similarity=0.123 Sum_probs=81.1
Q ss_pred CcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCC--Cccceeeeeeec--ccCcceEEEEE
Q 009404 230 SNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHC--HVVPLVGYCSEF--RGKRAMRLLVF 305 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~--niv~l~g~~~~~--~~~~~~~~lV~ 305 (535)
.+.++.|....+|+....++ .+++|+...... ......|.+++..|... .+.+++...... .......++++
T Consensus 27 i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~~---~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~ 102 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVG-RYILTLYEKRVK---AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV 102 (307)
T ss_pred ccccCCccccceEEEEeCCC-cEEEEEecCCCC---HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence 45567777789999876555 577887754321 22345677777777322 234444321100 00123468999
Q ss_pred ecCCCCCHHH-----------h---hhhccc---C-------CCCHHHHH------------HHHHHHHHHHHHHHh---
Q 009404 306 EFMPNGNLRD-----------C---LDGVLV---E-------GMNWDTRV------------AIAIGAARGLEYLHE--- 346 (535)
Q Consensus 306 e~~~~gsL~~-----------~---l~~~~~---~-------~l~~~~~~------------~i~~~ia~~L~~LH~--- 346 (535)
+|++|..+.. . ++.... . .-.|.... .....+.+.++++..
T Consensus 103 e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~ 182 (307)
T TIGR00938 103 EFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWP 182 (307)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhh
Confidence 9998854321 1 111000 0 01111110 011223345555543
Q ss_pred -cCCCCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 347 -AAAPRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 347 -~~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
.-...++|+|+.+.||++++++.+.|+||+.+.
T Consensus 183 ~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 183 RDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred hcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 123459999999999999988767899999774
No 479
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.13 E-value=0.0024 Score=63.40 Aligned_cols=73 Identities=25% Similarity=0.274 Sum_probs=45.5
Q ss_pred CcccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccC---CCCccceeeeeeecccCcceEEEEEe
Q 009404 230 SNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH---HCHVVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~~~~~lV~e 306 (535)
.+.++.|....+|+.. .+++.+.||.-.. .....|..|.+-|+.|. --.+++++++..... ..+||+|
T Consensus 22 ~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~----~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~----~~fLlle 92 (288)
T PF03881_consen 22 IEPVSGGDINEAYRLD-TDGGSYFVKVNSE----SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDD----DAFLLLE 92 (288)
T ss_dssp EEEE--SSSSEEEEEE-TTS-EEEEEEEEG----GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SS----CCEEEEE
T ss_pred eEecCCCChhheEEEE-CCCccEEEEecCh----hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecC----CceEEEE
Confidence 4568889999999988 5688899998862 22335888998888883 345778888765422 3399999
Q ss_pred cCCCC
Q 009404 307 FMPNG 311 (535)
Q Consensus 307 ~~~~g 311 (535)
|++.+
T Consensus 93 ~l~~~ 97 (288)
T PF03881_consen 93 FLEMG 97 (288)
T ss_dssp -----
T ss_pred eecCC
Confidence 99776
No 480
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.12 E-value=0.0051 Score=60.86 Aligned_cols=31 Identities=29% Similarity=0.478 Sum_probs=25.7
Q ss_pred CCeeecCCCCCCEEeCCCCc-EEEEecCCccc
Q 009404 350 PRILHRDIKSSNILLDENLN-AKITDLGMAKR 380 (535)
Q Consensus 350 ~~i~H~DLk~~NILl~~~~~-vkL~DFGla~~ 380 (535)
+.++|+|+.+.|||+++++. .-|+||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 45899999999999997555 46999998764
No 481
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.01 E-value=0.018 Score=58.61 Aligned_cols=80 Identities=23% Similarity=0.165 Sum_probs=50.0
Q ss_pred ccceeCceEEEEEEEcCC-cEEEEEEeccC------CCCChhHHHHHHHHHHhccC--CC-CccceeeeeeecccCcceE
Q 009404 232 IVGQGGSSYVYRGQLTDG-RIVAVKRFKTQ------GGPNADSVFLTEVDMLSRLH--HC-HVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 232 ~LG~G~fG~Vy~~~~~~g-~~vaVK~l~~~------~~~~~~~~~~~Ei~~l~~l~--H~-niv~l~g~~~~~~~~~~~~ 301 (535)
.||.|....||++...+| +.|+||.-... ..+-...+..-|.+.|+... -| .+++++.+-. ...
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~------e~~ 75 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDT------EMA 75 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEcc------ccc
Confidence 479999999999998654 58999975421 22223333456777776652 33 4556665532 244
Q ss_pred EEEEecCCCC-CHHHhh
Q 009404 302 LLVFEFMPNG-NLRDCL 317 (535)
Q Consensus 302 ~lV~e~~~~g-sL~~~l 317 (535)
.+|||+++.. .|++.|
T Consensus 76 ~~vMEdL~~~~ilR~~L 92 (370)
T TIGR01767 76 VTVMEDLSHHKIARKGL 92 (370)
T ss_pred eehHhhCccchHHHHHH
Confidence 7999999653 343443
No 482
>PLN02236 choline kinase
Probab=96.87 E-value=0.013 Score=60.04 Aligned_cols=138 Identities=17% Similarity=0.162 Sum_probs=79.2
Q ss_pred ccceeCceEEEEEEEcC-----CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCcc-ceeeeeeecccCcceEEEEE
Q 009404 232 IVGQGGSSYVYRGQLTD-----GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV-PLVGYCSEFRGKRAMRLLVF 305 (535)
Q Consensus 232 ~LG~G~fG~Vy~~~~~~-----g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv-~l~g~~~~~~~~~~~~~lV~ 305 (535)
.|-.|-.-.+|+....+ ++.|++|+...... ..-...+|..+++.+...++. ++++.+.. ..|+
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~--~~idR~~E~~~~~~l~~~gl~P~~~~~~~~--------g~v~ 112 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVE--LFFDRDDEIRTFECMSRHGQGPRLLGRFPN--------GRVE 112 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCC--eeechHHHHHHHHHHHHcCCCCceEEEECC--------ceEE
Confidence 45447788899987542 36799998765432 211236788898888544443 56665432 2479
Q ss_pred ecCCCCCHHHh-----------------hhhccc---C-CCCHHHHHHHHHH-----------------HHHHHHHHH--
Q 009404 306 EFMPNGNLRDC-----------------LDGVLV---E-GMNWDTRVAIAIG-----------------AARGLEYLH-- 345 (535)
Q Consensus 306 e~~~~gsL~~~-----------------l~~~~~---~-~l~~~~~~~i~~~-----------------ia~~L~~LH-- 345 (535)
+|+++.+|... ++.... . ...+..+..+..+ +...+..|.
T Consensus 113 efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~ 192 (344)
T PLN02236 113 EFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKE 192 (344)
T ss_pred EeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHH
Confidence 99877665321 111110 0 1112222222211 111122222
Q ss_pred --h-cCCCCeeecCCCCCCEEeCC-CCcEEEEecCCcc
Q 009404 346 --E-AAAPRILHRDIKSSNILLDE-NLNAKITDLGMAK 379 (535)
Q Consensus 346 --~-~~~~~i~H~DLk~~NILl~~-~~~vkL~DFGla~ 379 (535)
. .....++|+|+++.|||+++ ++.+.++||..+.
T Consensus 193 ~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 193 LSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred hcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 1 11235899999999999986 4679999998775
No 483
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.67 E-value=0.024 Score=56.84 Aligned_cols=146 Identities=18% Similarity=0.214 Sum_probs=80.6
Q ss_pred ccceeCceEEEEEEEcCCcEEEEEEecc-CCCCChhHHHHHHHHHHhccCC--CCccceeeeeeecccCcceEEEEEecC
Q 009404 232 IVGQGGSSYVYRGQLTDGRIVAVKRFKT-QGGPNADSVFLTEVDMLSRLHH--CHVVPLVGYCSEFRGKRAMRLLVFEFM 308 (535)
Q Consensus 232 ~LG~G~fG~Vy~~~~~~g~~vaVK~l~~-~~~~~~~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~~~~~lV~e~~ 308 (535)
.+..|..-.+|..... ++.+++. ... ...........+|..+|+.+.- --+.+.+++|.+.. -...+.||+|.
T Consensus 32 ~~~~G~sn~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~--~g~pf~v~~~v 107 (321)
T COG3173 32 EISGGWSNDTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGY--LGTPFYVMEWV 107 (321)
T ss_pred eccCCcccceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCC--CCCceEEEEEe
Confidence 3433444556666554 7778887 332 1222223335678888887743 23446667766533 23568999999
Q ss_pred CCCCHHHhhhhccc-----------------------------------CC-CCHHHHHH--------HHHHHHHHHHHH
Q 009404 309 PNGNLRDCLDGVLV-----------------------------------EG-MNWDTRVA--------IAIGAARGLEYL 344 (535)
Q Consensus 309 ~~gsL~~~l~~~~~-----------------------------------~~-l~~~~~~~--------i~~~ia~~L~~L 344 (535)
+|..+.+.+..... .. ..|..... ..-....-..+|
T Consensus 108 eGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl 187 (321)
T COG3173 108 EGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWL 187 (321)
T ss_pred cceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHH
Confidence 88433322211000 00 00111110 000112223444
Q ss_pred HhcC-----CCCeeecCCCCCCEEeCCCCcEEEEecCCcccc
Q 009404 345 HEAA-----APRILHRDIKSSNILLDENLNAKITDLGMAKRL 381 (535)
Q Consensus 345 H~~~-----~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~ 381 (535)
+... .+.++|+|+.+.|++++.+.-+=+.||+++..-
T Consensus 188 ~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 188 EANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred HhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 4332 357999999999999998888999999998653
No 484
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.59 E-value=0.046 Score=56.66 Aligned_cols=74 Identities=18% Similarity=0.178 Sum_probs=49.5
Q ss_pred CcccceeCceEEEEEEEcCCcEEEEEEeccCCC------CChhHHHHHHHHHHhccC---CCCccceeeeeeecccCcce
Q 009404 230 SNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGG------PNADSVFLTEVDMLSRLH---HCHVVPLVGYCSEFRGKRAM 300 (535)
Q Consensus 230 ~~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~------~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~~~ 300 (535)
.+.||.|....||+.... +..++||+-..... +.....-..|.+.|+.+. ..++++++.++.+ .
T Consensus 37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded------~ 109 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT------M 109 (418)
T ss_pred EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC------C
Confidence 356899999999998874 55699998762211 112222344566666553 3578889988764 2
Q ss_pred EEEEEecCCC
Q 009404 301 RLLVFEFMPN 310 (535)
Q Consensus 301 ~~lV~e~~~~ 310 (535)
.+++|||+++
T Consensus 110 ~vlvME~L~~ 119 (418)
T PLN02756 110 ALIGMRYLEP 119 (418)
T ss_pred CEEEEeecCC
Confidence 3889999976
No 485
>KOG1219 consensus Uncharacterized conserved protein, contains laminin, cadherin and EGF domains [Signal transduction mechanisms]
Probab=96.56 E-value=0.0045 Score=73.13 Aligned_cols=47 Identities=21% Similarity=0.467 Sum_probs=25.8
Q ss_pred cCcccceEEeccCCCCCcccccccCCCcCcccCCCCC-CCCCCeeeeee
Q 009404 30 SGQKNWKCTCSSSLQGDQSNILKLNCSRSCDCSPAVG-GSSEGKWTCIC 77 (535)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~c~~ 77 (535)
++..+|.|.|++-|.||-==+=-.+|.+ =-|+.|.. .-+-+++.|.|
T Consensus 3881 ~~~ggy~CkCpsqysG~~CEi~~epC~s-nPC~~GgtCip~~n~f~CnC 3928 (4289)
T KOG1219|consen 3881 QPKGGYKCKCPSQYSGNHCEIDLEPCAS-NPCLTGGTCIPFYNGFLCNC 3928 (4289)
T ss_pred CCCCceEEeCcccccCcccccccccccC-CCCCCCCEEEecCCCeeEeC
Confidence 3446999999999999652222234542 22443210 11455566666
No 486
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.29 E-value=0.00068 Score=78.30 Aligned_cols=161 Identities=13% Similarity=-0.014 Sum_probs=110.2
Q ss_pred HHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCCCCCHHHhhhhcccCC--CCHHHHHHHHHHHHHHHHHHHh
Q 009404 269 FLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGVLVEG--MNWDTRVAIAIGAARGLEYLHE 346 (535)
Q Consensus 269 ~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~--l~~~~~~~i~~~ia~~L~~LH~ 346 (535)
.+.|.+.++...|+++.....-..... ....+..++|+..|.+.+.|-+...+. ++..-....-.+......-.|+
T Consensus 1276 ll~e~de~~~~~h~~~~~~p~rI~ps~--s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls 1353 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSE--STEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILS 1353 (2724)
T ss_pred hhhhhhhhhhhhceeeecccccCCCCC--ChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhh
Confidence 445555666678888876654443322 234588999999999999985533222 2222222222222444444443
Q ss_pred c--CCCCeeecCCCCCCEEeCCCCcEEEEecCCccccccCCCCCCCCCCCccccCccccCccccccCCCCccchHHHHHH
Q 009404 347 A--AAPRILHRDIKSSNILLDENLNAKITDLGMAKRLKADGLPSCSSSPARMQGTFGYFAPEYAMVGRASLMSDVFSFGV 424 (535)
Q Consensus 347 ~--~~~~i~H~DLk~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlGv 424 (535)
. +...-+|++||+-|.+|..+.+++++++|+.+..... ........+++.|+.|+....-.++.++|+|..|+
T Consensus 1354 ~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~-----~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~ 1428 (2724)
T KOG1826|consen 1354 LTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV-----LSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSL 1428 (2724)
T ss_pred cccCCccchhhhhhhhccceecCCcccccccccccccCch-----HhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 2 2234799999999999999999999999999844332 11223456778899999888888999999999999
Q ss_pred HHHHHHhCCCCC
Q 009404 425 VLLELITGRQPI 436 (535)
Q Consensus 425 il~eLltG~~P~ 436 (535)
.+|++.-|..+|
T Consensus 1429 ~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1429 SLYLRSDGNAYF 1440 (2724)
T ss_pred HHHHHhcccHHH
Confidence 999998887665
No 487
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.26 E-value=0.043 Score=55.86 Aligned_cols=138 Identities=15% Similarity=0.174 Sum_probs=77.7
Q ss_pred ccceeCceEEEEEEEcC----CcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCc-cceeeeeeecccCcceEEEEEe
Q 009404 232 IVGQGGSSYVYRGQLTD----GRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHV-VPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 232 ~LG~G~fG~Vy~~~~~~----g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~~~~~lV~e 306 (535)
.|..|-...+|+....+ +..|++|+....... .-...+|..+++.+..-++ .++++++.. .+|.+
T Consensus 21 ~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~--~IdR~~E~~il~~l~~~gl~P~~l~~~~~--------G~i~~ 90 (330)
T PLN02421 21 RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY--VIDRERELQAIKYLSAAGFGAKLLGVFGN--------GMIQS 90 (330)
T ss_pred EeCCcccceEEEEEecCCCCCCceEEEEEecCCcCe--EechHHHHHHHHHHHhcCCCCceeEEeCC--------cEeeh
Confidence 34447777899887543 237899987654321 1224678889888865444 356655421 24889
Q ss_pred cCCCCCHHH-------hh----------hhccc---CCC-CHHHHHHHHHHH----------------------HHHHHH
Q 009404 307 FMPNGNLRD-------CL----------DGVLV---EGM-NWDTRVAIAIGA----------------------ARGLEY 343 (535)
Q Consensus 307 ~~~~gsL~~-------~l----------~~~~~---~~l-~~~~~~~i~~~i----------------------a~~L~~ 343 (535)
|+++..|.. .+ +.... ... -|..+..+..++ ..-+..
T Consensus 91 fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (330)
T PLN02421 91 FINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVE 170 (330)
T ss_pred hhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHH
Confidence 987765521 11 11110 001 123222222111 111222
Q ss_pred HH----hcC-CCCeeecCCCCCCEEeCC-CCcEEEEecCCcc
Q 009404 344 LH----EAA-APRILHRDIKSSNILLDE-NLNAKITDLGMAK 379 (535)
Q Consensus 344 LH----~~~-~~~i~H~DLk~~NILl~~-~~~vkL~DFGla~ 379 (535)
+. ..+ ...++|+|+.+.|||+++ ++.++++||..|.
T Consensus 171 l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 171 LKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred HHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 21 111 224799999999999974 5689999999875
No 488
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.19 E-value=0.059 Score=54.36 Aligned_cols=138 Identities=20% Similarity=0.250 Sum_probs=92.1
Q ss_pred cccceeCceEEEEEEEcCCcEEEEEEeccCC---------------------CCChhHH----HHHHHHHHhccCCCCcc
Q 009404 231 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQG---------------------GPNADSV----FLTEVDMLSRLHHCHVV 285 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~---------------------~~~~~~~----~~~Ei~~l~~l~H~niv 285 (535)
.-|..|--..||.+.-.+|..+|||+++..- ....++. ...|+.-|.+|+...|.
T Consensus 150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP 229 (520)
T KOG2270|consen 150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIP 229 (520)
T ss_pred cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3467799999999999999999999886321 0011111 23577778888666554
Q ss_pred ceeeeeeecccCcceEEEEEecCCCCCH-HHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 009404 286 PLVGYCSEFRGKRAMRLLVFEFMPNGNL-RDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILL 364 (535)
Q Consensus 286 ~l~g~~~~~~~~~~~~~lV~e~~~~gsL-~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl 364 (535)
-.--.... ...|||+|+....- .-.|.. -.++...+..+-.|++.-|.-|-... +++|.||+--|+|+
T Consensus 230 ~PePIlLk------~hVLVM~FlGrdgw~aPkLKd---~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Ly 298 (520)
T KOG2270|consen 230 CPEPILLK------NHVLVMEFLGRDGWAAPKLKD---ASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLY 298 (520)
T ss_pred CCCceeee------cceEeeeeccCCCCcCccccc---ccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheE
Confidence 22211111 22899999953111 111111 23666677778888888888887766 59999999999999
Q ss_pred CCCCcEEEEecCCccc
Q 009404 365 DENLNAKITDLGMAKR 380 (535)
Q Consensus 365 ~~~~~vkL~DFGla~~ 380 (535)
-+ |.+.|+|-+-+..
T Consensus 299 hd-G~lyiIDVSQSVE 313 (520)
T KOG2270|consen 299 HD-GKLYIIDVSQSVE 313 (520)
T ss_pred EC-CEEEEEEcccccc
Confidence 75 4899999876654
No 489
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.09 E-value=0.011 Score=55.94 Aligned_cols=30 Identities=27% Similarity=0.449 Sum_probs=21.3
Q ss_pred CeeecCCCCCCEEe-CCCCcEEEEecCCccc
Q 009404 351 RILHRDIKSSNILL-DENLNAKITDLGMAKR 380 (535)
Q Consensus 351 ~i~H~DLk~~NILl-~~~~~vkL~DFGla~~ 380 (535)
.++|+||.+.|||+ +.++.++++||..+..
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 48999999999999 8889999999998753
No 490
>PTZ00384 choline kinase; Provisional
Probab=95.88 E-value=0.099 Score=54.19 Aligned_cols=74 Identities=16% Similarity=0.236 Sum_probs=45.0
Q ss_pred cccceeCceEEEEEEEcCC--c-----EEEEEEeccCCCCChhHHHHHHHHHHhccCCCCcc-ceeeeeeecccCcceEE
Q 009404 231 NIVGQGGSSYVYRGQLTDG--R-----IVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVV-PLVGYCSEFRGKRAMRL 302 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g--~-----~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv-~l~g~~~~~~~~~~~~~ 302 (535)
+.|..|-...+|++...++ . .|.++...... ...-+-.+|.++++.+...++- ++++.+.. +
T Consensus 56 ~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~--~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~--------g 125 (383)
T PTZ00384 56 KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYN--SLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD--------F 125 (383)
T ss_pred EEeCCcccceEEEEEecCCCCCccccceEEEEeccCCC--ceEeccHHHHHHHHHHHhCCCCCeEEEecCC--------E
Confidence 3454588889999976543 2 24444432211 1111235789999999655554 66665542 6
Q ss_pred EEEecCCCCCHH
Q 009404 303 LVFEFMPNGNLR 314 (535)
Q Consensus 303 lV~e~~~~gsL~ 314 (535)
+|+||++|..|.
T Consensus 126 ~l~efIeGr~l~ 137 (383)
T PTZ00384 126 TIQEWVEGNTMG 137 (383)
T ss_pred EEEEEeccccCC
Confidence 899999887663
No 491
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.85 E-value=0.11 Score=52.01 Aligned_cols=29 Identities=24% Similarity=0.360 Sum_probs=25.0
Q ss_pred CCeeecCCCCCCEEeCCCCcEEEEecCCcc
Q 009404 350 PRILHRDIKSSNILLDENLNAKITDLGMAK 379 (535)
Q Consensus 350 ~~i~H~DLk~~NILl~~~~~vkL~DFGla~ 379 (535)
..++|+|+.+.||+++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 35899999999999988 578999998654
No 492
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.79 E-value=0.15 Score=51.69 Aligned_cols=142 Identities=21% Similarity=0.331 Sum_probs=82.8
Q ss_pred cceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCC------ccceeeeeeecccCcceEEEEEe
Q 009404 233 VGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCH------VVPLVGYCSEFRGKRAMRLLVFE 306 (535)
Q Consensus 233 LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~n------iv~l~g~~~~~~~~~~~~~lV~e 306 (535)
|.+ .-..||+....+|+. ++|+.... . ...+...|...|..|.-.. +..+=|-....-......+-+++
T Consensus 34 l~s-~eN~~f~~~~~~g~~-iLki~~~~-~--~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~ 108 (331)
T COG2334 34 LNS-EENSNFRVQTEDGRY-ILKIYRPG-W--TRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFE 108 (331)
T ss_pred ccc-ccCceEEEEecCCCe-EEEEecCC-C--CHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEE
Confidence 444 566799998887776 88888765 2 2234667788888773221 12222211111111136688999
Q ss_pred cCCCCCHHH-h-----------h-------hhcc------cCCCCHHH-------------HHHHHHHHHHHHHHHHhcC
Q 009404 307 FMPNGNLRD-C-----------L-------DGVL------VEGMNWDT-------------RVAIAIGAARGLEYLHEAA 348 (535)
Q Consensus 307 ~~~~gsL~~-~-----------l-------~~~~------~~~l~~~~-------------~~~i~~~ia~~L~~LH~~~ 348 (535)
|++|..+.. - | ++.. .....|.. ......++...+..+.+.-
T Consensus 109 ~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~ 188 (331)
T COG2334 109 YLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARL 188 (331)
T ss_pred ecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhc
Confidence 999988872 1 1 1111 01133431 0123344445555555432
Q ss_pred C-------CCeeecCCCCCCEEeCCCCc-EEEEecCCcc
Q 009404 349 A-------PRILHRDIKSSNILLDENLN-AKITDLGMAK 379 (535)
Q Consensus 349 ~-------~~i~H~DLk~~NILl~~~~~-vkL~DFGla~ 379 (535)
. ..+||+|+.+.|||++.+.. +-+.||+-+.
T Consensus 189 ~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 189 PAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred hhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 1 12899999999999998875 8899999765
No 493
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.78 E-value=0.063 Score=55.37 Aligned_cols=75 Identities=21% Similarity=0.146 Sum_probs=49.4
Q ss_pred cccceeCceEEEEEEEcC-CcEEEEEEeccC-----CCCChhHHHHHHHHHHhccC--CC-CccceeeeeeecccCcceE
Q 009404 231 NIVGQGGSSYVYRGQLTD-GRIVAVKRFKTQ-----GGPNADSVFLTEVDMLSRLH--HC-HVVPLVGYCSEFRGKRAMR 301 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~-g~~vaVK~l~~~-----~~~~~~~~~~~Ei~~l~~l~--H~-niv~l~g~~~~~~~~~~~~ 301 (535)
+.||.|.-..||++.+.+ ++.|+||.-... ..+-..++..-|.+.|+... -| ++++++.+-. ...
T Consensus 35 ~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~------e~~ 108 (409)
T PRK12396 35 KEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDS------VMN 108 (409)
T ss_pred eEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECc------HHh
Confidence 568999999999999853 567999975421 22333344566777777662 33 5666776533 244
Q ss_pred EEEEecCCCC
Q 009404 302 LLVFEFMPNG 311 (535)
Q Consensus 302 ~lV~e~~~~g 311 (535)
.+|||+++..
T Consensus 109 ~~vMEdL~~~ 118 (409)
T PRK12396 109 CCVMEDLSDH 118 (409)
T ss_pred hHHHHhCccc
Confidence 7899999653
No 494
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=95.78 E-value=0.016 Score=60.59 Aligned_cols=72 Identities=17% Similarity=0.238 Sum_probs=48.6
Q ss_pred EEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccCCCCccceeeeeeecccCcceEEEEEecCCCCCHHHhhhhc
Q 009404 241 VYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKRAMRLLVFEFMPNGNLRDCLDGV 320 (535)
Q Consensus 241 Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~ 320 (535)
++.|...+|+.+ ..-+.- ......++....+++.+.|+|+...+.+... ......+|+|++ +.||++.+...
T Consensus 5 ~~~a~~~~~~~c-~nglpl---t~~s~~ilgr~~~lktl~~~~l~~yl~~~r~---~~~r~IVV~e~~-~~Sled~~~~~ 76 (725)
T KOG1093|consen 5 TFFAQEKPGDVC-SNGLPL---TPNSIQILGRFQYLKSLQHDNLCQYLDFSRG---KHERVIVVMEHY-TMSLEDILKTG 76 (725)
T ss_pred EEehhcCCCccc-cCCCcC---CCcHHHHhhhhHHHHhhcCccceeeEeeecC---ccceEEEEehhh-ccchHHHHHhc
Confidence 566666666544 222221 1222347788899999999999988876543 344578999999 67999988653
No 495
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=95.70 E-value=0.0077 Score=39.81 Aligned_cols=30 Identities=27% Similarity=0.339 Sum_probs=13.0
Q ss_pred eEEEehHHHHHHHHHHHHHHHhhhhheeCC
Q 009404 119 VVVIVLLLCVILTTIAFLMLVLCYVYRKGK 148 (535)
Q Consensus 119 ~~~ii~i~~~~~~~l~~l~~~~~~~~rr~k 148 (535)
..+.+++++.+++++++++++++++|||+|
T Consensus 11 vaIa~~VvVPV~vI~~vl~~~l~~~~rR~k 40 (40)
T PF08693_consen 11 VAIAVGVVVPVGVIIIVLGAFLFFWYRRKK 40 (40)
T ss_pred EEEEEEEEechHHHHHHHHHHhheEEeccC
Confidence 333333333334444444444444555543
No 496
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.57 E-value=0.043 Score=55.21 Aligned_cols=75 Identities=16% Similarity=0.174 Sum_probs=58.8
Q ss_pred cceEEEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCcEEEEecCC
Q 009404 298 RAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGM 377 (535)
Q Consensus 298 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~~~~vkL~DFGl 377 (535)
..+.|++|++- |++|... +...|.+.+.|+.+.+..+.-+..+- +.=|||+.-.||||+ +|+|-|+||-+
T Consensus 298 ~~y~yl~~kdh-gt~is~i------k~~~~~e~lsff~s~~sil~~lekkf--~fehrnlt~~niLId-~GnvtLIDfkl 367 (488)
T COG5072 298 TLYLYLHFKDH-GTPISII------KADRSEEELSFFWSCISILDILEKKF--PFEHRNLTLDNILID-EGNVTLIDFKL 367 (488)
T ss_pred ceEEEEEEecC-Cceeeee------ecccHHHHHHHHHHHHHHHhhhhhcC--Ccccccccccceeee-cCceEEEEeee
Confidence 44667788876 5555421 33578899999999888777776654 589999999999999 89999999999
Q ss_pred ccccc
Q 009404 378 AKRLK 382 (535)
Q Consensus 378 a~~~~ 382 (535)
++...
T Consensus 368 sRl~~ 372 (488)
T COG5072 368 SRLSY 372 (488)
T ss_pred eeccc
Confidence 98443
No 497
>PRK06148 hypothetical protein; Provisional
Probab=95.45 E-value=0.17 Score=59.18 Aligned_cols=145 Identities=19% Similarity=0.249 Sum_probs=78.5
Q ss_pred cccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccC--CCC--ccceeee----e-e--ecccCcc
Q 009404 231 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH--HCH--VVPLVGY----C-S--EFRGKRA 299 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~--H~n--iv~l~g~----~-~--~~~~~~~ 299 (535)
+.|+ |..-.+|+.+..+|+.+++|+.+.... ......|.++|..|. ++. +.+++-. . . +......
T Consensus 31 ~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~---~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~ 106 (1013)
T PRK06148 31 TPLD-GERDLNFRLTTDDGADYILKIVNPSEP---RVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEP 106 (1013)
T ss_pred eecC-CcCCceEEEEeCCCCeEEEEEcCCccc---hhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCce
Confidence 3454 456778999888888899999986432 222344556666552 122 2233211 0 1 1111122
Q ss_pred eEEEEEecCCCCCHHHhh-----------------hh----cc----cCCCCHHH-----------------HHHHHHHH
Q 009404 300 MRLLVFEFMPNGNLRDCL-----------------DG----VL----VEGMNWDT-----------------RVAIAIGA 337 (535)
Q Consensus 300 ~~~lV~e~~~~gsL~~~l-----------------~~----~~----~~~l~~~~-----------------~~~i~~~i 337 (535)
..+-+++|++|..|.+.. +. .. ...+.|.. ...++.++
T Consensus 107 ~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~ 186 (1013)
T PRK06148 107 RLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERF 186 (1013)
T ss_pred EEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHH
Confidence 457789999998776510 00 00 01123321 11222222
Q ss_pred HHHHH-----HHHhcCCCCeeecCCCCCCEEeCCCC--cEE-EEecCCccc
Q 009404 338 ARGLE-----YLHEAAAPRILHRDIKSSNILLDENL--NAK-ITDLGMAKR 380 (535)
Q Consensus 338 a~~L~-----~LH~~~~~~i~H~DLk~~NILl~~~~--~vk-L~DFGla~~ 380 (535)
..... .|.+ -...+||+|+.+.|||++.+. .+. |+|||-+..
T Consensus 187 ~~~~~~~v~p~l~~-Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 187 LARFERNVAPRLAA-LPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred HHHHHHHHHHHHhc-CCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 22221 1211 123499999999999999775 555 999998753
No 498
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.26 E-value=0.076 Score=54.26 Aligned_cols=60 Identities=13% Similarity=0.087 Sum_probs=42.1
Q ss_pred EEEEecCCCCCHHHhhhhcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 009404 302 LLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAARGLEYLHEAAAPRILHRDIKSSNILLDE 366 (535)
Q Consensus 302 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~DLk~~NILl~~ 366 (535)
.++-+|+.+-++..++.. +..++....+++.--+.|+--+--.. .++|.|+.|.||++.-
T Consensus 321 vl~E~~~~Gl~v~~~v~~---~~~pe~l~kkva~lg~~AllkMl~vD--NFvHaDlHPGNVlirf 380 (565)
T KOG1236|consen 321 VLVETYERGLSVLRFVKW---KSQPEALVKKVAKLGVNALLKMLIVD--NFVHADLHPGNVLIRF 380 (565)
T ss_pred eeeeeccccccHHhhhhc---ccChHHHHHHHHHHHHHHHHHHHHhh--cceecccCCCcEEEEe
Confidence 567788888899998865 33455555666665566655444332 2999999999999953
No 499
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.20 E-value=0.21 Score=47.36 Aligned_cols=75 Identities=25% Similarity=0.285 Sum_probs=47.9
Q ss_pred cccceeCceEEEEEEEcCCcEEEEEEeccCCCCChhHHHHHHHHHHhccC---CCCccceeeeeeecccCcceEEEEEec
Q 009404 231 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLH---HCHVVPLVGYCSEFRGKRAMRLLVFEF 307 (535)
Q Consensus 231 ~~LG~G~fG~Vy~~~~~~g~~vaVK~l~~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~~~~~lV~e~ 307 (535)
+.+.-|.--..|.... +..++.||+-.. .....|..|+.-|..|. .-++.+++.+-.+ ....|+|+||
T Consensus 22 ~~v~gG~inea~~v~d-g~~~~FvK~n~~----~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~----~~~sylVle~ 92 (286)
T COG3001 22 EEVSGGDINEAWRLRD-GTDPFFVKCNQR----EQLSMFTAEADGLELLARSNTITVPKVIAVGAS----RDHSYLVLEY 92 (286)
T ss_pred cccCCccccceeEeec-CCcceEEEecch----hhHHHHHHHHHHHHHHHhcCCccccceEEecCC----CCeeEEEEee
Confidence 3344455455555544 367799997432 33345888888777774 3456666655444 4567999999
Q ss_pred CCCCCHH
Q 009404 308 MPNGNLR 314 (535)
Q Consensus 308 ~~~gsL~ 314 (535)
++-+.+.
T Consensus 93 L~~~~~d 99 (286)
T COG3001 93 LPTGPLD 99 (286)
T ss_pred ccCCCCC
Confidence 9987665
No 500
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=94.91 E-value=0.2 Score=50.38 Aligned_cols=30 Identities=20% Similarity=0.273 Sum_probs=27.1
Q ss_pred CeeecCCCCCCEEeCCCCcEEEEecCCccc
Q 009404 351 RILHRDIKSSNILLDENLNAKITDLGMAKR 380 (535)
Q Consensus 351 ~i~H~DLk~~NILl~~~~~vkL~DFGla~~ 380 (535)
.++|+|+.+.|+|+++++.+.++||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 599999999999999998999999987753
Done!