BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009407
(535 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/479 (42%), Positives = 299/479 (62%), Gaps = 4/479 (0%)
Query: 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPI 99
++ N I G ++ES++ +Y DV+NPAT+EV+ Q+P++T E+ A A +AF +W +
Sbjct: 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAV 64
Query: 100 TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R R++ Q+L+ + ++LA IT E GK K+A G+V RG+E VE + G +L MG+
Sbjct: 65 PRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGD 124
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+ +++ ++ + R P+GV GI PFNFP M+P WMFP+A+ GNTF+LKPSE+ P +
Sbjct: 125 SLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLT 184
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279
L EL +AGLP GV N+V+G HD VN I + I+AISFVGS G ++Y + S K
Sbjct: 185 EKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLK 244
Query: 280 RVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTV-VFVGDSKSWEDKLV 338
RVQS GAKNH IVL G+RCMA + V V G + + KL
Sbjct: 245 RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQ 304
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
E+ +K+ G + LGPVI + K+R I+ G+E GARL+ DGR V + G
Sbjct: 305 EKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENV---SDDGY 361
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
F+GPTI +VT +M +K+EIF PVL ++ +L+EAI+I NK+++ NGA +FTS+ A
Sbjct: 362 FVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAI 421
Query: 459 RKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517
R F+ I+AG +GIN+ +P P+ FF F+G K+SF G L+ GK V+FYT+ K VT ++
Sbjct: 422 RYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/496 (44%), Positives = 302/496 (60%), Gaps = 7/496 (1%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
+ I G + S ++ NPAT EV + L ++ + AAV +AK A P W T R
Sbjct: 29 HFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRR 88
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
RV K +L+ + ++LA ++ E GKT+ DA+GD+ RGLEV E G+ LQ E+
Sbjct: 89 ARVFXKFVQLLNDNXNELAEXLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTE 148
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222
GID YS+R+P+G+ AGI PFNFP IP W F A+ CGN F+LKPSE+DP I L
Sbjct: 149 GAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRL 208
Query: 223 AELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQ 282
AEL +EAGLP G+LN+V+G V+AI +I A+SFVGS ++Y A+ GKR Q
Sbjct: 209 AELXIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQ 268
Query: 283 SNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWE--DKLVER 340
GAKNH I+ P G+RC A+S V VG+ + DKLV
Sbjct: 269 CFGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLVPX 328
Query: 341 AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFI 400
++L++ T+ AD GPV++K+A++RI LI SGIE GA+L++DGR+ + GYE+G+FI
Sbjct: 329 VESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFI 388
Query: 401 GPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARK 460
G + DVT D + YK EIFGPVL ++A + EEA+ + K++YGNG AI+T G AAR
Sbjct: 389 GGCLFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARD 448
Query: 461 FQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDL 520
F + I G VG+NVPIPVPL + SF G K+S GDLN +G + F+T+ KT+T +W
Sbjct: 449 FASRINIGXVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW--- 505
Query: 521 PGG--SGVSLAMPTSQ 534
P G G ++PT +
Sbjct: 506 PSGIKDGAEFSIPTXR 521
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 153/487 (31%), Positives = 239/487 (49%), Gaps = 18/487 (3%)
Query: 43 NLIGGAFIESRSSEYID-VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITT 101
N GG I+S+ + V PAT V+ Q+ EE AV +A+ A+ W
Sbjct: 22 NYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIE 81
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYV 161
R RVML+ +IR D +A GKT+ +A+ D+ + +E+ G+A G+++
Sbjct: 82 RSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHI 141
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
+ G Y+ REPLGVCAGI +N+P MI W A+ CGN V KPS P ++
Sbjct: 142 -QLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVI 200
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
LAE+ EAG+P G++N+V G +T + +C N+ +SF GS G + ++ K V
Sbjct: 201 LAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHV 260
Query: 282 QSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDS--KSWEDKLVE 339
+G K+ ++ GQ C T VFV + +++V+
Sbjct: 261 TLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTN-GTRVFVQREIMPQFLEEVVK 319
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV--PGYEHG 397
R KA+ V + +G +ISK +++ + + GAR+L G + P ++G
Sbjct: 320 RTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNG 379
Query: 398 NFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAA 457
F+ P +L + DM C KEEIFGPV+ + D+ EE ++ N +G + +FT +
Sbjct: 380 YFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISR 439
Query: 458 ARKFQTEIEAGQVGINV----PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
A + +EAG IN P+ VP F G K S G N G+A V++Y+Q+KTV
Sbjct: 440 AHRVAANLEAGTCYINTYSISPVEVP-----FGGYKMSGFGREN--GQATVDYYSQLKTV 492
Query: 514 TQQWRDL 520
+ D+
Sbjct: 493 IVEMGDV 499
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 235/482 (48%), Gaps = 14/482 (2%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQR 104
IGG ++E+ S + INPA EV++++ + E+ + AV +A + W R R
Sbjct: 10 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 69
Query: 105 VMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPN 163
++ + +++R D+LA T + GK L + + D+ G +V+E+ G+ GE +P
Sbjct: 70 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL 129
Query: 164 VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223
Y+ REPLGV AGI +N+P I LW A+ GN + KPSE P ++ LA
Sbjct: 130 RETSF-VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 188
Query: 224 ELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARASAKG-KRV 281
E+ EAG+PDGV N++ G+ V + + I ISF G G + A AS+ K V
Sbjct: 189 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 248
Query: 282 QSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKS--WEDKLVE 339
+G K+ I+ P GQ C T VF+ S+ +E K++E
Sbjct: 249 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTN-GTRVFIHRSQQARFEAKVLE 307
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
R + +++ + + + GP++S E + I+SG ARLL G + + G +
Sbjct: 308 RVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAY 367
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
+ PT+ TD DM +EEIFGPV+ + D +EAI+ N +YG A + T A A
Sbjct: 368 VAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAH 427
Query: 460 KFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517
+ +EAG IN P +P G K S G N G + YT+IK+V +
Sbjct: 428 RAIHRLEAGICWINTWGESPAEMP---VGGYKQSGVGREN--GLTTLAHYTRIKSVQVEL 482
Query: 518 RD 519
D
Sbjct: 483 GD 484
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 235/482 (48%), Gaps = 14/482 (2%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQR 104
IGG ++E+ S + INPA EV++++ + E+ + AV +A + W R R
Sbjct: 11 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 70
Query: 105 VMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPN 163
++ + +++R D+LA T + GK L + + D+ G +V+E+ G+ GE +P
Sbjct: 71 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL 130
Query: 164 VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223
Y+ REPLGV AGI +N+P I LW A+ GN + KPSE P ++ LA
Sbjct: 131 RETSF-VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 189
Query: 224 ELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARASAKG-KRV 281
E+ EAG+PDGV N++ G+ V + + I ISF G G + A AS+ K V
Sbjct: 190 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 249
Query: 282 QSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKS--WEDKLVE 339
+G K+ I+ P GQ C T VF+ S+ +E K++E
Sbjct: 250 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTN-GTRVFIHRSQQARFEAKVLE 308
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
R + +++ + + + GP++S E + I+SG ARLL G + + G +
Sbjct: 309 RVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAY 368
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
+ PT+ TD DM +EEIFGPV+ + D +EAI+ N +YG A + T A A
Sbjct: 369 VAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAH 428
Query: 460 KFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517
+ +EAG IN P +P G K S G N G + YT+IK+V +
Sbjct: 429 RAIHRLEAGICWINTWGESPAEMP---VGGYKQSGVGREN--GLTTLAHYTRIKSVQVEL 483
Query: 518 RD 519
D
Sbjct: 484 GD 485
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 235/482 (48%), Gaps = 14/482 (2%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQR 104
IGG ++E+ S + INPA EV++++ + E+ + AV +A + W R R
Sbjct: 10 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 69
Query: 105 VMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPN 163
++ + +++R D+LA T + GK L + + D+ G +V+E+ G+ GE +P
Sbjct: 70 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL 129
Query: 164 VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223
Y+ REPLGV AGI +N+P I LW A+ GN + KPSE P ++ LA
Sbjct: 130 RETSF-VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 188
Query: 224 ELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARASAKG-KRV 281
E+ EAG+PDGV N++ G+ V + + I ISF G G + A AS+ K V
Sbjct: 189 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 248
Query: 282 QSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKS--WEDKLVE 339
+G K+ I+ P GQ C T VF+ S+ +E K++E
Sbjct: 249 TMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTN-GTRVFIHRSQQARFEAKVLE 307
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
R + +++ + + + GP++S E + I+SG ARLL G + + G +
Sbjct: 308 RVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAY 367
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
+ PT+ TD DM +EEIFGPV+ + D +EAI+ N +YG A + T A A
Sbjct: 368 VAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAH 427
Query: 460 KFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517
+ +EAG IN P +P G K S G N G + YT+IK+V +
Sbjct: 428 RAIHRLEAGICWINTWGESPAEMP---VGGYKQSGVGREN--GLTTLAHYTRIKSVQVEL 482
Query: 518 RD 519
D
Sbjct: 483 GD 484
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/482 (31%), Positives = 234/482 (48%), Gaps = 14/482 (2%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQR 104
IGG ++E+ S + INPA EV++++ + E+ + AV +A + W R R
Sbjct: 11 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 70
Query: 105 VMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPN 163
++ + +++R D+LA T + GK L + + D+ G +V+E+ G+ GE +P
Sbjct: 71 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL 130
Query: 164 VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223
Y+ REPLGV AGI +N+P I LW A+ GN + KPSE P ++ LA
Sbjct: 131 RETSF-VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 189
Query: 224 ELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARASAKG-KRV 281
E+ EAG+PDGV N++ G+ V + + I ISF G G + A AS+ K V
Sbjct: 190 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 249
Query: 282 QSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKS--WEDKLVE 339
+G K+ I+ P GQ T VF+ S+ +E K++E
Sbjct: 250 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQ-VXTNGTRVFIHRSQQARFEAKVLE 308
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
R + +++ + + + GP++S E + I+SG ARLL G + + G +
Sbjct: 309 RVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAY 368
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
+ PT+ TD DM +EEIFGPV+ + D +EAI+ N +YG A + T A A
Sbjct: 369 VAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAH 428
Query: 460 KFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517
+ +EAG IN P +P G K S G N G + YT+IK+V +
Sbjct: 429 RAIHRLEAGICWINTWGESPAEMP---VGGYKQSGVGREN--GLTTLAHYTRIKSVQVEL 483
Query: 518 RD 519
D
Sbjct: 484 GD 485
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/482 (31%), Positives = 234/482 (48%), Gaps = 14/482 (2%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQR 104
IGG ++E+ S + INPA EV++++ + E+ + AV +A + W R R
Sbjct: 11 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSR 70
Query: 105 VMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPN 163
++ + +++R D+LA T + GK L + + D+ G +V+E+ G+ GE +P
Sbjct: 71 ILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL 130
Query: 164 VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223
Y+ REPLGV AGI +N+P I LW A+ GN + KPSE P ++ LA
Sbjct: 131 RETSF-VYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 189
Query: 224 ELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARASAKG-KRV 281
E+ EAG+PDGV N++ G+ V + + I ISF G G + A AS+ K V
Sbjct: 190 EIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEV 249
Query: 282 QSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKS--WEDKLVE 339
+G K+ I+ P GQ T VF+ S+ +E K++E
Sbjct: 250 TMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQ-VATNGTRVFIHRSQQARFEAKVLE 308
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
R + +++ + + + GP++S E + I+SG ARLL G + + G +
Sbjct: 309 RVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAY 368
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
+ PT+ TD DM +EEIFGPV+ + D +EAI+ N +YG A + T A A
Sbjct: 369 VAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAH 428
Query: 460 KFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517
+ +EAG IN P +P G K S G N G + YT+IK+V +
Sbjct: 429 RAIHRLEAGICWINTWGESPAEMP---VGGYKQSGVGREN--GLTTLAHYTRIKSVQVEL 483
Query: 518 RD 519
D
Sbjct: 484 GD 485
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 231/481 (48%), Gaps = 21/481 (4%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF---PSWRNTPIT 100
I + S S + V NPAT+E + ++ E+ AV AA+QAF WR +
Sbjct: 24 FINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDAS 83
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGE 159
R R++ KL +LI RD LA GK +A D+ ++ + + G A G
Sbjct: 84 ERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGR 143
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+P N TY+ EP+GVC I P+NFP ++ LW A++CGNT V+KP+E+ P +
Sbjct: 144 TIPMDGNFF-TYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTA 202
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHIYARASAKG 278
+ + L EAG P GV+NIV G T AI ++ ++F GS G I A
Sbjct: 203 LHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSN 262
Query: 279 -KRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDS--KSWED 335
KRV +G K+ IV GQ C+A S +FV +S +
Sbjct: 263 LKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASR-LFVEESIYDEFVR 321
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395
+ VERAK + GP I K+ E+I LI+SG + GA+L G P
Sbjct: 322 RSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG----PWGN 377
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
G FI PT+ +DVT DM KEEIFGPV M+ SL++ IK N YG A IFT+
Sbjct: 378 KGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDI 437
Query: 456 AAARKFQTEIEAGQVGINVP--IPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
A + +++G V +N + PF F +G+ G+ G + YT++KTV
Sbjct: 438 DKAITVSSALQSGTVWVNCYSVVSAQCPFGGF-----KMSGNGRELGEYGFHEYTEVKTV 492
Query: 514 T 514
T
Sbjct: 493 T 493
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 211 bits (537), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 146/486 (30%), Positives = 224/486 (46%), Gaps = 18/486 (3%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
+ I G F+ S S E ++PAT EV+ E A AA +AF W T R
Sbjct: 29 HFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKER 88
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
+R +L++ ELI + D+LA+ + G+ L+ + V R E A M +
Sbjct: 89 KRYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTF 148
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222
V Y++R P G I P+N P M+ W A+ GNT VLKP+E P + L
Sbjct: 149 PVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKL 208
Query: 223 AELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
AE+ EA LP GV N+V G + A+ + ++ G G + A+ KR+
Sbjct: 209 AEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRL 268
Query: 282 QSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWED---KLV 338
+G K+ +V G+RC A S ++ + K +ED K+V
Sbjct: 269 SPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLV--EEKIFEDFVGKVV 326
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV----PGY 394
ERA+A++V + + ++GP+I + +R+ +++G GARLL+ G
Sbjct: 327 ERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDL 386
Query: 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454
GN++ PT+ M+ +EEIFGPVL+ + EEA++ N +YG A +FT
Sbjct: 387 SRGNYLLPTVFVGEN-HMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRD 445
Query: 455 GAAARKFQTEIEAGQVGINVP--IPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKT 512
A + E+EAG V +N +P PF GS GD G ++FYT +KT
Sbjct: 446 LERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGS-----GDRREGGTYALDFYTDLKT 500
Query: 513 VTQQWR 518
+ R
Sbjct: 501 IALPLR 506
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 230/485 (47%), Gaps = 25/485 (5%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF---PSWRNTPIT 100
I + ES S + V NPAT+E + ++ E+ AV AA++AF WR +
Sbjct: 24 FINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDAS 83
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGE 159
R +++ KL +LI RD LA + GK A D+ ++ + + G A G
Sbjct: 84 ERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGR 143
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+P V +Y+ EP+GVC I P+N P ++ A+ CGNT ++KP+E+ P +
Sbjct: 144 TIP-VDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTA 202
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHIY-ARASAK 277
+ +A L EAG P GV+NIV G T AI ++ ++F GS G I A A +
Sbjct: 203 LHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSN 262
Query: 278 GKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDS--KSWED 335
KRV +GAKN IV GQ C+A S +FV ++ +
Sbjct: 263 LKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASK-LFVEEAIYDEFVQ 321
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395
+ VERAK + GP I+K +I LI+SG + GA+L G P
Sbjct: 322 RSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGG----PWGN 377
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
G FI PT+ ++VT DM KEEIFGPV M+ SL+E IK N YG A +FT
Sbjct: 378 KGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDL 437
Query: 456 AAARKFQTEIEAGQVGINVPIPV----PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511
A + ++AG V +N + P F +G G+ G++ YT++K
Sbjct: 438 DKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREM-------GEYGIHEYTEVK 490
Query: 512 TVTQQ 516
TVT +
Sbjct: 491 TVTMK 495
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 232/483 (48%), Gaps = 19/483 (3%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTP 98
P+ + I G ++E + + I PAT E++++L T + A+++AK+A W
Sbjct: 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMS 72
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDA-QGDVFRGLEVVEHSCGMATLQM 157
R R++ + +++R D L+ T + GK +++ D G + E G+A +
Sbjct: 73 PMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSAL 132
Query: 158 -GEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDP 216
G+Y+P G Y+ R PLGVC GI +N+P I W A+ GN V KPSE P
Sbjct: 133 NGDYIP--LGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTP 190
Query: 217 GASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASA 276
++ +AE+ +EAGLP G+ N++ G DT + + ++ +S GS G + A A+
Sbjct: 191 LGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAG 250
Query: 277 KGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKS-WED 335
K V +G K+ IV GQ C + V +K+ + +
Sbjct: 251 HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLE 310
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDG---RNIVVP 392
L R +A+ + + LGP++SK +E++ I+ G GA L+ G N+
Sbjct: 311 NLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVA-- 368
Query: 393 GYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452
G ++ PT+ DVT DM +EEIFGPV+ + D +E + N ++G +FT
Sbjct: 369 --GEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFT 426
Query: 453 SSGAAARKFQTEIEAGQVGINVP--IPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510
+ A A + +EAG + IN PV +P F GSK S G N A + Y+++
Sbjct: 427 ADLARAHRVVDGLEAGTLWINTYNLCPVEIP---FGGSKQSGFGREN--SAAALEHYSEL 481
Query: 511 KTV 513
KTV
Sbjct: 482 KTV 484
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 161/502 (32%), Positives = 238/502 (47%), Gaps = 29/502 (5%)
Query: 31 LYSKQHNPPRVPNL--------IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKA 82
+ S Q P PNL I + S S V NPAT E V ++ +
Sbjct: 1 MASLQLLPSPTPNLEIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDK 60
Query: 83 AVSAAKQAFP---SWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDV 139
AV AA+ AF WR + R R++ KL +L+ RD LA + GK A
Sbjct: 61 AVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYID 120
Query: 140 FRG-LEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198
+G ++ + + G A G +P V T++ EP+GVC I P+NFP ++ W
Sbjct: 121 LQGVIKTLRYYAGWADKIHGMTIP-VDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIA 179
Query: 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRA 257
A+ CGNT V+KP+E+ P +++ + L EAG P GV+NI+ G T AI I
Sbjct: 180 PALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDK 239
Query: 258 ISFVGSNVAGMHIYARASAKG-KRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQ 316
I+F GS G I A KRV +G K+ I+ GQ
Sbjct: 240 IAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQ 299
Query: 317 RCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQS 374
C A S +FV +S + + + VERAK V + + + GP I K+ +I LIQS
Sbjct: 300 CCTAGSR-IFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQS 358
Query: 375 GIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434
G+ GA+L G+ + G+ FI PT+ ++VT DM KEEIFGPV ++ +++E
Sbjct: 359 GVAEGAKLECGGKGLGRKGF----FIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDE 414
Query: 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASF 492
I+ N + +G AA+FT+ A + ++AG V IN + PF F
Sbjct: 415 VIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGF-----KM 469
Query: 493 AGDLNFYGKAGVNFYTQIKTVT 514
+G+ G+ G+ Y+++KTVT
Sbjct: 470 SGNGREMGEFGLREYSEVKTVT 491
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 141/473 (29%), Positives = 229/473 (48%), Gaps = 5/473 (1%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
N IGG ++ S S+ ID+++P+T +V+ ++P + + A+ A+ A +W TR
Sbjct: 15 NFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTR 74
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
Q ++ IR + LA + EQGK L A+ +V +++ C A G+ +P
Sbjct: 75 QNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILP 134
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222
+ + Y + P GV GI +NFP + A+ GNT VLKP+++ P A+ L
Sbjct: 135 SDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTEL 194
Query: 223 AELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
+A EAGLPDGVLN+++GT V +C+ + I+ GS VAG IY ++ V
Sbjct: 195 GRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPV 254
Query: 282 QSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTV-VFVGDSKSWEDKLVER 340
+G K +V+ GQ C + + V + K +
Sbjct: 255 MLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPL 314
Query: 341 AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFI 400
K LKV +AD+ +GP +++ + I ++ I+ GA + G+ V G+E G +
Sbjct: 315 VKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWY 374
Query: 401 GPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARK 460
PT+L DV D EE FGP+L ++ S+E+AI+ N + YG A + T S A +
Sbjct: 375 EPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQ 434
Query: 461 FQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
+++E G+V IN + F ++ F G+ GK G+ Y + KTV
Sbjct: 435 AISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGE---DGKFGLEQYLEKKTV 484
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 153/491 (31%), Positives = 231/491 (47%), Gaps = 20/491 (4%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITT 101
I G + E I VINP+T+E++ +P T E+ + AV AA++AF +W T
Sbjct: 11 FIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSGAH 70
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYV 161
R + + I D T + GK +A D+ E+ G A G+
Sbjct: 71 RATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALDGKQK 130
Query: 162 PNVSNGIDTYS---LREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
V+ ++ + LR+PLGV I P+N+P ++ W A+ G T VLKPSE
Sbjct: 131 APVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASVT 190
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARASAK 277
+ E+ E GLP GVLNI+ G A + ++ I+F GS+ G + A A+
Sbjct: 191 CLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQL 250
Query: 278 GKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWE--D 335
K V +G K+ +V GQ C A S ++ V +S + E D
Sbjct: 251 VKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLL-VHESIAAEFVD 309
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY- 394
KLV+ K +K++ E LGPVISK ++I + I + GA +L G P +
Sbjct: 310 KLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSR---PEHL 366
Query: 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454
+ G +I PTI+TD++ M+ +KEE+FGPVL S +EAI + N +YG AA+F++
Sbjct: 367 KKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSND 426
Query: 455 GAAARKFQTEIEAGQVGINVPIP--VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKT 512
+ +E G V +N P V P+ ++ F +L G+ G+ Y IK
Sbjct: 427 LERCERITKALEVGAVWVNCSQPCFVQAPWGGI--KRSGFGREL---GEWGIQNYLNIKQ 481
Query: 513 VTQQWRDLPGG 523
VTQ D P G
Sbjct: 482 VTQDISDEPWG 492
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 228/482 (47%), Gaps = 10/482 (2%)
Query: 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNT 97
P + P I G F+ R +IDV+NPAT+ V+S++P E+ + A+ AA++A P W
Sbjct: 4 PVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEAL 63
Query: 98 PITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM 157
P R + K+ IR +++ I E GK + A+ +V + +++ A
Sbjct: 64 PAIERASWLRKISAGIRERATEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYE 123
Query: 158 GEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPG 217
GE + + G + + LGV GI P+NFP + A+ GNT V+KPSE P
Sbjct: 124 GEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPN 183
Query: 218 ASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASA 276
+I A++ E GLP GV N+V G +TV + + + +S GS AG I A A+
Sbjct: 184 NAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243
Query: 277 KGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTV-VFVGDSKSWED 335
+V +G K IV+ GQ C V V G + +
Sbjct: 244 NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVN 303
Query: 336 KLVERAKALKV-NAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY 394
+L E +A++ N D +GP+I+ A ER+ + + +E GAR+ L G+ + GY
Sbjct: 304 RLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGY 363
Query: 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454
+ PT+L DV +M EE FGPVL + D+LEEAI + N + YG ++I+T +
Sbjct: 364 ----YYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQN 419
Query: 455 GAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
A K ++ G+ IN + F K+ G GK G++ Y Q + V
Sbjct: 420 LNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGA---DGKHGLHEYLQTQVVY 476
Query: 515 QQ 516
Q
Sbjct: 477 LQ 478
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 232/477 (48%), Gaps = 23/477 (4%)
Query: 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFP-----SWRNTPITTRQRVMLKLQELIRR 115
INP+T+ ++ +P T E+ AV AAK+A W + R R + + I+
Sbjct: 28 INPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWSAASGSLRARYLRAIAAKIKE 87
Query: 116 DIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDT---YS 172
D+L + + GK L++A D+ + E+ G+A + +S +DT Y
Sbjct: 88 KKDELGKLESIDCGKPLEEALADLDDVVACFEYYAGLAEELDSKQKAPISLPMDTFKSYI 147
Query: 173 LREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLP 232
L+EP+GV A I P+N+P ++ W A+ G +LKPSE + L E+ E GLP
Sbjct: 148 LKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPSELASVTCLELGEICKEVGLP 207
Query: 233 DGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHG 291
GVLNIV G H+ ++ ++ ISF GS+ G I A+ K V +G K+
Sbjct: 208 RGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMTTAAQLVKPVSLELGGKSPI 267
Query: 292 IVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWE--DKLVERAKALKVNAG 349
+V GQ C A S ++ V +S + E DKLV+ A+ +K++
Sbjct: 268 VVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLI-VHESIAVEFVDKLVKWAENIKISDP 326
Query: 350 TEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY-EHGNFIGPTILTDV 408
E LGP++S+ +++ I S GA +L GR P + + G F+ PTI+TDV
Sbjct: 327 LEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRR---PEHLKKGYFVEPTIITDV 383
Query: 409 TADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAG 468
T M+ ++EE+FGPVL + EEAI + N YG G+A+ ++ + ++AG
Sbjct: 384 TTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSNDLERCERLSKALQAG 443
Query: 469 QVGINVPIP--VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGG 523
V IN P + P+ ++ F +L G+ G+ Y +K VT+ D P G
Sbjct: 444 IVWINCAQPSFIQAPWGGI--KRSGFGREL---GEWGLENYLSVKQVTRYTSDEPWG 495
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 145/482 (30%), Positives = 227/482 (47%), Gaps = 10/482 (2%)
Query: 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNT 97
P + P I G F+ R +IDV+NPAT+ V+S++P E+ + A+ AA++A P W
Sbjct: 4 PVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEAL 63
Query: 98 PITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM 157
P R + K+ IR +++ I E GK + A+ +V + +++ A
Sbjct: 64 PAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYE 123
Query: 158 GEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPG 217
GE + + G + + LGV GI P+NFP + A+ GNT V+KPSE P
Sbjct: 124 GEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPN 183
Query: 218 ASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASA 276
+I A++ E GLP GV N+V G +TV + + + +S GS AG I A A+
Sbjct: 184 NAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243
Query: 277 KGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTV-VFVGDSKSWED 335
+V +G K IV+ GQ C V V G + +
Sbjct: 244 NITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVN 303
Query: 336 KLVERAKALKV-NAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY 394
+L E +A++ N D +GP+I+ A ER+ + + +E GAR+ G+ + GY
Sbjct: 304 RLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGY 363
Query: 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454
+ PT+L DV +M EE FGPVL + D+LE+AI + N + YG ++I+T +
Sbjct: 364 ----YYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419
Query: 455 GAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
A K ++ G+ IN + F K+ G GK G++ Y Q + V
Sbjct: 420 LNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGA---DGKHGLHEYLQTQVVY 476
Query: 515 QQ 516
Q
Sbjct: 477 LQ 478
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/482 (30%), Positives = 227/482 (47%), Gaps = 10/482 (2%)
Query: 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNT 97
P + P I G F+ R +IDV+NPAT+ V+S++P E+ + A+ AA++A P W
Sbjct: 4 PVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEAL 63
Query: 98 PITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM 157
P R + K+ IR +++ I E GK + A+ +V + +++ A
Sbjct: 64 PAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYE 123
Query: 158 GEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPG 217
GE + + G + + LGV GI P+NFP + A+ GNT V+KPSE P
Sbjct: 124 GEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPN 183
Query: 218 ASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASA 276
+I A++ E GLP GV N+V G +TV + + + +S GS AG I A A+
Sbjct: 184 NAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243
Query: 277 KGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTV-VFVGDSKSWED 335
+V +G K IV+ GQ C V V G + +
Sbjct: 244 NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVN 303
Query: 336 KLVERAKALKV-NAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY 394
+L E +A++ N D +GP+I+ A ER+ + + +E GAR+ G+ + GY
Sbjct: 304 RLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGY 363
Query: 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454
+ PT+L DV +M EE FGPVL + D+LE+AI + N + YG ++I+T +
Sbjct: 364 ----YYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419
Query: 455 GAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
A K ++ G+ IN + F K+ G GK G++ Y Q + V
Sbjct: 420 LNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGA---DGKHGLHEYLQTQVVY 476
Query: 515 QQ 516
Q
Sbjct: 477 LQ 478
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 151/489 (30%), Positives = 231/489 (47%), Gaps = 21/489 (4%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRN 96
PR IGG + E I +INPAT+E++ +P T E+ AV AA++A W +
Sbjct: 22 PRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGS 81
Query: 97 TPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMA-TL 155
T R + + + + LA + + GKTL ++ D+ E+ G+A L
Sbjct: 82 TTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAGLAEAL 141
Query: 156 QMGEYVP-NV-SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSE 213
P N+ S+ +Y LREPLGV I P+N+P ++ +W A+ G +LKPSE
Sbjct: 142 DSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSE 201
Query: 214 KDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYA 272
+ L E+ E GLP G LNI+ G + ++ ISF GS G I
Sbjct: 202 LASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMT 261
Query: 273 RASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXX-XXXGQRCMALSTVVFVGD-S 330
A+ K V +G K+ +V GQ C A S ++ + +
Sbjct: 262 AAAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIA 321
Query: 331 KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390
++ D+L++ K +K++ E D LGPV+S E++ + I + GA +L G
Sbjct: 322 SAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGER-- 379
Query: 391 VPGY-EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAA 449
P + + G ++ PTI+TDV ME +KEE+FGPVL + E+AI++ N +YG GAA
Sbjct: 380 -PQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAA 438
Query: 450 IFTSSGAAARKFQTEIEAGQVGINVPIPV--PLPFFSFTGSKAS-FAGDLNFYGKAGVNF 506
+ + +F + G + IN P LP + G K S F DL GK G+
Sbjct: 439 VMSKDVKRCERFTKAFQTGIIWINCSQPTFNELP---WGGKKRSGFGRDL---GKWGLEN 492
Query: 507 YTQIKTVTQ 515
+ IK VT+
Sbjct: 493 FLNIKQVTE 501
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 139/477 (29%), Positives = 222/477 (46%), Gaps = 11/477 (2%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQ 103
L+ G +I++ I V NPA V+ +P + K A+ A+ +A W R
Sbjct: 36 LVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERA 95
Query: 104 RVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPN 163
++ K +LI + D +A+ +T+EQGK L +A+G+V +E A G+ +P
Sbjct: 96 GILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPA 155
Query: 164 VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223
NG +R+P+GV A I P+NFPA + A+ G T +++P++ P ++ L
Sbjct: 156 PQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALG 215
Query: 224 ELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARASAKGKRVQ 282
LA +AG+P GVL IV G + A + + +R +SF GS G + A+ + KR+
Sbjct: 216 VLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRIS 275
Query: 283 SNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTV-VFVGDSKSWEDKLVERA 341
+G IV GQ C+ + + V G + +KL +
Sbjct: 276 LELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKV 335
Query: 342 KALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIG 401
K LKV GTE +GP+I ++A ++ I+ + GA+L+ G+ + G F
Sbjct: 336 KELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL------GGLFFE 389
Query: 402 PTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKF 461
P ILT VT+DM KEE FGP+ D+ EE I N +G A +T + + A +
Sbjct: 390 PGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRV 449
Query: 462 QTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518
+E G VG N + + F G K S G K G+ Y + K + ++
Sbjct: 450 SEALEYGMVGHNTGL-ISNEVAPFGGVKQSGLGREG--SKYGIEEYLETKYICSAYK 503
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 151/489 (30%), Positives = 231/489 (47%), Gaps = 21/489 (4%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRN 96
PR IGG + E I +INPAT+E++ +P T E+ AV AA++A W +
Sbjct: 22 PRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGS 81
Query: 97 TPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMA-TL 155
T R + + + + LA + + GKTL ++ D+ E+ G+A L
Sbjct: 82 TTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAGLAEAL 141
Query: 156 QMGEYVP-NV-SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSE 213
P N+ S+ +Y LREPLGV I P+N+P ++ +W A+ G +LKPSE
Sbjct: 142 DSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSE 201
Query: 214 KDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYA 272
+ L E+ E GLP G LNI+ G + ++ ISF GS G I
Sbjct: 202 LASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMT 261
Query: 273 RASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXX-XXXGQRCMALSTVVFVGD-S 330
A+ K V +G K+ +V GQ C A S ++ + +
Sbjct: 262 AAAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIA 321
Query: 331 KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390
++ D+L++ K +K++ E D LGPV+S E++ + I + GA +L G
Sbjct: 322 SAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGER-- 379
Query: 391 VPGY-EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAA 449
P + + G ++ PTI+TDV ME +KEE+FGPVL + E+AI++ N +YG GAA
Sbjct: 380 -PQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAA 438
Query: 450 IFTSSGAAARKFQTEIEAGQVGINVPIPV--PLPFFSFTGSKAS-FAGDLNFYGKAGVNF 506
+ + +F + G + IN P LP + G K S F DL GK G+
Sbjct: 439 VMSKDVKRCERFTKAFQTGIIWINCSQPTFNELP---WGGKKRSGFGRDL---GKWGLEN 492
Query: 507 YTQIKTVTQ 515
+ IK VT+
Sbjct: 493 FLNIKQVTE 501
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 227/483 (46%), Gaps = 25/483 (5%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF---PSWRNTPIT 100
I + ++ S + +NP+T EV+ Q+ E+ AV AA+ AF WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGK-TLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R R++ +L +LI RD LA T + GK + D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+P + +Y+ EP+GVC I P+NFP ++ W A+ GN V+K +E+ P +
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHI-YARASAK 277
+ +A L EAG P GV+NIV G T AI ++ ++F GS G I A S+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSN 261
Query: 278 GKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGD-SKSWEDK 336
KRV +G K+ I++ GQ C A S D + ++
Sbjct: 262 LKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDEFVER 321
Query: 337 LVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396
V RAK+ V ++ + GP + + ++I I +G + GA+LL G GY
Sbjct: 322 SVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY-- 379
Query: 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456
FI PT+ DV M KEEIFGPV+ ++ ++EE + N + YG AA+FT
Sbjct: 380 --FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 437
Query: 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASF-----AGDLNFYGKAGVNFYTQIK 511
A ++AG V +N + G+++ F +G G+ G+ YT++K
Sbjct: 438 KANYLSQALQAGTVWVNC--------YDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
Query: 512 TVT 514
TVT
Sbjct: 490 TVT 492
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 227/489 (46%), Gaps = 20/489 (4%)
Query: 27 TDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSA 86
D+ L+ +Q LI G ++++ + E IDV NPA + + +P +E +AA+ A
Sbjct: 3 NDSNLFRQQA-------LINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDA 55
Query: 87 AKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVV 146
A +A P+WR R ++ L+ D LA +T EQGK L +A+G++ +
Sbjct: 56 ANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFI 115
Query: 147 EHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNT 206
E G+ +P +++P+GV A I P+NFPA + A+ G T
Sbjct: 116 EWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCT 175
Query: 207 FVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNV 265
VLKP+ + P +++ LAELA+ AG+P GV N+V G+ V N + + +R +SF GS
Sbjct: 176 MVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTE 235
Query: 266 AGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVV 325
G + + + K+V +G IV GQ C+ + +
Sbjct: 236 IGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVC-ANRL 294
Query: 326 FVGDS--KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLL 383
+V D + +KL + L + G + +GP+I ++A ++ I +E GAR++
Sbjct: 295 YVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVV 354
Query: 384 LDGRNIVVPGYEH-GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKN 442
G+ +E GNF PTIL DV A+ + KEE FGP+ + + I N
Sbjct: 355 CGGK-----AHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDT 409
Query: 443 QYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKA 502
++G A + + + +E G VGIN I + F G KAS G K
Sbjct: 410 EFGLAAYFYARDLSRVFRVGEALEYGIVGINTGI-ISNEVAPFGGIKASGLGREG--SKY 466
Query: 503 GVNFYTQIK 511
G+ Y +IK
Sbjct: 467 GIEDYLEIK 475
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 227/483 (46%), Gaps = 25/483 (5%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF---PSWRNTPIT 100
I + ++ S + +NP+T EV+ Q+ E+ AV AA+ AF WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGK-TLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R R++ +L +LI RD LA T + GK + D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+P + +Y+ EP+GVC I P+NFP ++ W A+ GN V+K +E+ P +
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHI-YARASAK 277
+ +A L EAG P GV+NIV G T AI ++ ++F GS G I A S+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSN 261
Query: 278 GKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGD-SKSWEDK 336
KRV +G K+ I++ GQ C A S D + ++
Sbjct: 262 LKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVER 321
Query: 337 LVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396
V RAK+ V ++ + GP + + ++I I +G + GA+LL G GY
Sbjct: 322 SVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY-- 379
Query: 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456
FI PT+ DV M KEEIFGPV+ ++ ++EE + N + YG AA+FT
Sbjct: 380 --FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 437
Query: 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASF-----AGDLNFYGKAGVNFYTQIK 511
A ++AG V +N + G+++ F +G G+ G+ YT++K
Sbjct: 438 KANYLSQALQAGTVWVNC--------YDVFGAQSPFGGYKMSGSGQELGEYGLQAYTEVK 489
Query: 512 TVT 514
TVT
Sbjct: 490 TVT 492
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 227/489 (46%), Gaps = 20/489 (4%)
Query: 27 TDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSA 86
D+ L+ +Q LI G ++++ + E IDV NPA + + +P +E +AA+ A
Sbjct: 3 NDSNLFRQQA-------LINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDA 55
Query: 87 AKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVV 146
A +A P+WR R ++ L+ D LA +T EQGK L +A+G++ +
Sbjct: 56 ANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFI 115
Query: 147 EHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNT 206
E G+ +P +++P+GV A I P+NFPA + A+ G T
Sbjct: 116 EWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCT 175
Query: 207 FVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNV 265
VLKP+ + P +++ LAELA+ AG+P GV N+V G+ V N + + +R +SF GS
Sbjct: 176 MVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTE 235
Query: 266 AGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVV 325
G + + + K+V +G IV GQ C+ + +
Sbjct: 236 IGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVC-ANRL 294
Query: 326 FVGDS--KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLL 383
+V D + +KL + L + G + +GP+I ++A ++ I +E GAR++
Sbjct: 295 YVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVV 354
Query: 384 LDGRNIVVPGYEH-GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKN 442
G+ +E GNF PTIL DV A+ + KEE FGP+ + + I N
Sbjct: 355 CGGK-----AHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDT 409
Query: 443 QYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKA 502
++G A + + + +E G VGIN I + F G KAS G K
Sbjct: 410 EFGLAAYFYARDLSRVFRVGEALEYGIVGINTGI-ISNEVAPFGGIKASGLGREG--SKY 466
Query: 503 GVNFYTQIK 511
G+ Y +IK
Sbjct: 467 GIEDYLEIK 475
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 227/483 (46%), Gaps = 25/483 (5%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF---PSWRNTPIT 100
I + ++ S + +NP+T EV+ Q+ E+ AV AA+ AF WR +
Sbjct: 17 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 76
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGK-TLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R R++ +L +LI RD LA T + GK + D+ L+ + + G A G+
Sbjct: 77 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 136
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+P + +Y+ EP+GVC I P+NFP ++ W A+ GN V+K +E+ P +
Sbjct: 137 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 195
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHI-YARASAK 277
+ +A L EAG P GV+NIV G T AI ++ ++F GS G I A S+
Sbjct: 196 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSN 255
Query: 278 GKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGD-SKSWEDK 336
KRV +G K+ I++ GQ C A S D + ++
Sbjct: 256 LKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVER 315
Query: 337 LVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396
V RAK+ V ++ + GP + + ++I I +G + GA+LL G GY
Sbjct: 316 SVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY-- 373
Query: 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456
FI PT+ DV M KEEIFGPV+ ++ ++EE + N + YG AA+FT
Sbjct: 374 --FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 431
Query: 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASF-----AGDLNFYGKAGVNFYTQIK 511
A ++AG V +N + G+++ F +G G+ G+ YT++K
Sbjct: 432 KANYLSQALQAGTVWVNC--------YDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 483
Query: 512 TVT 514
TVT
Sbjct: 484 TVT 486
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 227/483 (46%), Gaps = 25/483 (5%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF---PSWRNTPIT 100
I + ++ S + +NP+T EV+ Q+ E+ AV AA+ AF WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGK-TLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R R++ +L +LI RD LA T + GK + D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+P + +Y+ EP+GVC I P+NFP ++ W A+ GN V+K +E+ P +
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHI-YARASAK 277
+ +A L EAG P GV+NIV G T AI ++ ++F GS G I A S+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSN 261
Query: 278 GKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGD-SKSWEDK 336
KRV +G K+ I++ GQ C A S D + ++
Sbjct: 262 LKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVER 321
Query: 337 LVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396
V RAK+ V ++ + GP + + ++I I +G + GA+LL G GY
Sbjct: 322 SVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY-- 379
Query: 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456
FI PT+ DV M KEEIFGPV+ ++ ++EE + N + YG AA+FT
Sbjct: 380 --FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 437
Query: 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASF-----AGDLNFYGKAGVNFYTQIK 511
A ++AG V +N + G+++ F +G G+ G+ YT++K
Sbjct: 438 KANYLSQALQAGTVWVNC--------YDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
Query: 512 TVT 514
TVT
Sbjct: 490 TVT 492
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 227/483 (46%), Gaps = 25/483 (5%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF---PSWRNTPIT 100
I + ++ S + +NP+T EV+ Q+ E+ AV AA+ AF WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGK-TLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R R++ +L +LI RD LA T + GK + D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+P + +Y+ EP+GVC I P+NFP ++ W A+ GN V+K +E+ P +
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHI-YARASAK 277
+ +A L EAG P GV+NIV G T AI ++ ++F GS G I A S+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSN 261
Query: 278 GKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGD-SKSWEDK 336
KRV +G K+ I++ GQ C A S D + ++
Sbjct: 262 LKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVER 321
Query: 337 LVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396
V RAK+ V ++ + GP + + ++I I +G + GA+LL G GY
Sbjct: 322 SVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY-- 379
Query: 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456
FI PT+ DV M KEEIFGPV+ ++ ++EE + N + YG AA+FT
Sbjct: 380 --FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 437
Query: 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASF-----AGDLNFYGKAGVNFYTQIK 511
A ++AG V +N + G+++ F +G G+ G+ YT++K
Sbjct: 438 KANYLSQALQAGTVWVNC--------YDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
Query: 512 TVT 514
TVT
Sbjct: 490 TVT 492
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 191 bits (485), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 144/484 (29%), Positives = 228/484 (47%), Gaps = 27/484 (5%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF---PSWRNTPIT 100
I + ++ S + +NP+T EV+ Q+ E+ AV AA+ AF WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGK-TLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R R++ +L +LI RD LA T + GK + D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+P + +Y+ EP+GVC I P+NFP ++ W A+ GN V+K +E+ P +
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHI-YARASAK 277
+ +A L EAG P GV+NIV G T AI ++ ++F GS G I A S+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSN 261
Query: 278 GKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDS--KSWED 335
KRV +G K+ I++ GQ C + FV + + +
Sbjct: 262 LKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ-CXCAGSRTFVQEDIYDEFVE 320
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395
+ V RAK+ V ++ + GP + + ++I I +G + GA+LL G GY
Sbjct: 321 RSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY- 379
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
FI PT+ DV M KEEIFGPV+ ++ ++EE + N + YG AA+FT
Sbjct: 380 ---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 456 AAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASF-----AGDLNFYGKAGVNFYTQI 510
A ++AG V +N + G+++ F +G G+ G+ YT++
Sbjct: 437 DKANYLSQALQAGTVWVNC--------YDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEV 488
Query: 511 KTVT 514
KTVT
Sbjct: 489 KTVT 492
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/484 (29%), Positives = 228/484 (47%), Gaps = 27/484 (5%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF---PSWRNTPIT 100
I + ++ S + +NP+T EV+ Q+ E+ AV AA+ AF WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGK-TLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R R++ +L +LI RD LA T + GK + D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+P + +Y+ EP+GVC I P+NFP ++ W A+ GN V+K +E+ P +
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHI-YARASAK 277
+ +A L EAG P GV+NIV G T AI ++ ++F GS G I A S+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSN 261
Query: 278 GKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDS--KSWED 335
KRV +G K+ I++ GQ C + FV + + +
Sbjct: 262 LKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ-CSCAGSRTFVQEDIYDEFVE 320
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395
+ V RAK+ V ++ + GP + + ++I I +G + GA+LL G GY
Sbjct: 321 RSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY- 379
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
FI PT+ DV M KEEIFGPV+ ++ ++EE + N + YG AA+FT
Sbjct: 380 ---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 456 AAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASF-----AGDLNFYGKAGVNFYTQI 510
A ++AG V +N + G+++ F +G G+ G+ YT++
Sbjct: 437 DKANYLSQALQAGTVWVNC--------YDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEV 488
Query: 511 KTVT 514
KTVT
Sbjct: 489 KTVT 492
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 153/493 (31%), Positives = 238/493 (48%), Gaps = 15/493 (3%)
Query: 26 STDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAV 84
S D +L K R L+ G +++ S ID ++P EVV P + ++ + AV
Sbjct: 12 SNDPRLRIKS----RYQXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAV 67
Query: 85 SAAKQAFPS--WRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRG 142
+AA++AF + W R R+ K+ +LI ++LA+ + E GK + A+G++
Sbjct: 68 AAARKAFDAGPWPRXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQARGEIGFC 127
Query: 143 LEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVT 202
++ ++ G A G+ N+ + LREP+GV I P+NFP +I P A+
Sbjct: 128 ADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIG 187
Query: 203 CGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAI-CDDANIRAISFV 261
G T VLKPSE G SI LAELA EAG+PDGV N+V G D + +D N+ ++F
Sbjct: 188 SGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFT 247
Query: 262 GSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMAL 321
GS G + A+ KRV +G K IV GQ C++
Sbjct: 248 GSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISG 307
Query: 322 ST-VVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGA 380
S +V G + ++L++ ++ + +G IS+ E++ + +GI SGA
Sbjct: 308 SRLLVQEGIRDALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGA 367
Query: 381 RLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVN 440
LLL G I G E G + PT+ VT D +EEIFGPVL + + +EA+ + N
Sbjct: 368 ELLLGGERI---GREAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALAN 424
Query: 441 KNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYG 500
++G A++++++ A + I AG+ IN I P G K S G G
Sbjct: 425 ATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVID-GTPELPIGGYKKSGLG--RELG 481
Query: 501 KAGVNFYTQIKTV 513
+ G + Y+Q K V
Sbjct: 482 RYGFDEYSQFKGV 494
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 209/433 (48%), Gaps = 4/433 (0%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITTR 102
I G ++ES + D+INP QEV+ + T E+ + A+ AA++AF S W TR
Sbjct: 37 IDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETR 96
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
+ + + + I+ + LA T + GKTL+++ D+ V + G+A GE +
Sbjct: 97 GKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMID 156
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222
+ ++ ++EP+GV I P+N+P + W A+ G + V+KPSE P +I +
Sbjct: 157 SPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRV 216
Query: 223 AELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
EL E G P G +N++ G V + + + +SF G G HI A+ +
Sbjct: 217 FELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNI 276
Query: 282 QSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKS-WEDKLVER 340
+G KN I+ GQ C A S ++ K +E L++R
Sbjct: 277 ALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDR 336
Query: 341 AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFI 400
K +K+ G +AD ++GPVIS + + +I + GA + + G+ + G F
Sbjct: 337 VKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFF 396
Query: 401 GPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARK 460
PT++T+ M +EE+FGPV+ ++ +EAI++ N + YG A+F+ A++
Sbjct: 397 EPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQR 456
Query: 461 FQTEIEAGQVGIN 473
+++ G V IN
Sbjct: 457 VANKLKLGTVWIN 469
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 150/495 (30%), Positives = 227/495 (45%), Gaps = 31/495 (6%)
Query: 32 YSKQHNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF 91
Y+KQ+ I G ++ES S+E I+VINPAT+EV+ ++ + AV AA +
Sbjct: 7 YTKQY--------INGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVY 58
Query: 92 PSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCG 151
+R+T + RQ ++ K+ + D + IT E G L + E V + G
Sbjct: 59 LEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLS--------ERVHYQXG 110
Query: 152 M-----ATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNT 206
+ A + Y G D ++E +GV I P+NFP A G+
Sbjct: 111 LNHFVAARDALDNYEFEERRG-DDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSP 169
Query: 207 FVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNV 265
VLKPSE+ P A+++LAE+ + G+P GV N+V+G V N + + +R SF GS
Sbjct: 170 VVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGP 229
Query: 266 AGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVV 325
G I +A+ K+V +G K+ IVL GQ C A + V+
Sbjct: 230 TGSKIXEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVL 289
Query: 326 FVGDSK-SWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLL 384
K ++ +L E+ ++V E +GP+ISK+ +++ I GIE GA L
Sbjct: 290 VPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFY 349
Query: 385 DGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQY 444
G G E G F PTI +V +EEIFGPV + + L+EAI+I N +Y
Sbjct: 350 GGPG-KPEGLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKY 408
Query: 445 GNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVP-LPFFSFTGSKASFAGDLNFYGKAG 503
G + K IEAG V IN P LP F G K S G +G G
Sbjct: 409 GLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDLP---FGGYKQSGLG--REWGDYG 463
Query: 504 VNFYTQIKTVTQQWR 518
+ + ++K++ ++
Sbjct: 464 IEEFLEVKSIAGYFK 478
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 234/491 (47%), Gaps = 30/491 (6%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITT 101
IGG F+++ S+ + INP V+ Q+ L + AV+AAK+AF + W
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKT----LKDAQGDVFRGLEVVEHSCGM---AT 154
R R++ +L +++ + ++LA + G LK G + C AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 155 LQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEK 214
+ + + PN + T + +EP+GVC + P+N+P M+ W + GNT V+KP++
Sbjct: 160 IPINQARPNRNL---TLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 215 DPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYAR 273
P ++ AEL ++AG+P GV+NI+ G+ V + D ++R I F GS G HI
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 274 -ASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDS-- 330
A + K+V +G K+ I+ G+ C+A +FV +S
Sbjct: 277 CALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGR-LFVEESIH 335
Query: 331 KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390
+ K+VE + +K+ E D + GP + ++ Q G++ GA L+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP 395
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQ-AD-SLEEAIKIVNKNQYGNGA 448
PG+ F PT+ TDV M KEE FGP+++ + AD ++ + N ++G +
Sbjct: 396 RPGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLAS 451
Query: 449 AIFTSSGAAARKFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNF 506
+FT A +++AG V IN V PF F ++ F DL G+A +N
Sbjct: 452 GVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGF--KQSGFGKDL---GEAALNE 506
Query: 507 YTQIKTVTQQW 517
Y +IKTVT ++
Sbjct: 507 YLRIKTVTFEY 517
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 234/491 (47%), Gaps = 30/491 (6%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITT 101
IGG F+++ S+ + INP V+ Q+ L + AV+AAK+AF + W
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKT----LKDAQGDVFRGLEVVEHSCGM---AT 154
R R++ +L +++ + ++LA + G LK G + C AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 155 LQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEK 214
+ + + PN + T + +EP+GVC + P+N+P M+ W + GNT V+KP++
Sbjct: 160 IPINQARPNRNL---TLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 215 DPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYAR 273
P ++ AEL ++AG+P GV+NI+ G+ V + D ++R I F GS G HI
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 274 -ASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDS-- 330
A + K+V +G K+ I+ G+ C+A +FV +S
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGR-LFVEESIH 335
Query: 331 KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390
+ K+VE + +K+ E D + GP + ++ Q G++ GA L+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP 395
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQ-AD-SLEEAIKIVNKNQYGNGA 448
PG+ F PT+ TDV M KEE FGP+++ + AD ++ + N ++G +
Sbjct: 396 RPGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLAS 451
Query: 449 AIFTSSGAAARKFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNF 506
+FT A +++AG V IN V PF F ++ F DL G+A +N
Sbjct: 452 GVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGF--KQSGFGKDL---GEAALNE 506
Query: 507 YTQIKTVTQQW 517
Y +IKTVT ++
Sbjct: 507 YLRIKTVTFEY 517
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/484 (28%), Positives = 227/484 (46%), Gaps = 27/484 (5%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF---PSWRNTPIT 100
I + ++ S + +NP+T +V+ + + AV AA+ AF WR +
Sbjct: 22 FINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRRMDAS 81
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGK-TLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R R++ +L +LI RD LA T + GK + D+ L+ + + G A G+
Sbjct: 82 ERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGK 141
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+P + +Y+ EP+GVC I P+NFP ++ W A+ GN V+K +E+ P +
Sbjct: 142 TIP-IDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 200
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHIYARASAKG 278
+ +A L EAG P GV+N++ G T AI ++ ++F GS G H+ A+ K
Sbjct: 201 LYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVG-HLIQVAAGKS 259
Query: 279 --KRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGD-SKSWED 335
KRV +G K+ I++ GQ C A S D + +
Sbjct: 260 NLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVE 319
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395
+ V RAK+ V ++ + GP + + +++ I+SG E G +LL G GY
Sbjct: 320 RSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAADRGY- 378
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
FI PT+ D+ M KEEIFGPV+ ++ S+EE + N ++YG AA+FT
Sbjct: 379 ---FIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDL 435
Query: 456 AAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASF-----AGDLNFYGKAGVNFYTQI 510
A ++AG V +N + G+++ F +G G+ G+ YT++
Sbjct: 436 DKANYLSQALQAGTVWVNC--------YDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEV 487
Query: 511 KTVT 514
KTVT
Sbjct: 488 KTVT 491
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 234/491 (47%), Gaps = 30/491 (6%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITT 101
IGG F+++ S+ + INP V+ Q+ L + AV+AAK+AF + W
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKT----LKDAQGDVFRGLEVVEHSCGM---AT 154
R R++ +L +++ + ++LA + G LK G + C AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 155 LQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEK 214
+ + + PN + T + +EP+GVC + P+N+P M+ W + GNT V+KP++
Sbjct: 160 IPINQARPNRNL---TLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 215 DPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYAR 273
P ++ AEL ++AG+P GV+NI+ G+ V + D ++R I F GS G HI
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 274 -ASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDS-- 330
A + K+V +G K+ I+ G+ C+A +FV +S
Sbjct: 277 CALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGR-LFVEESIH 335
Query: 331 KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390
+ K+VE + +K+ E D + GP + ++ Q G++ GA L+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP 395
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQ-AD-SLEEAIKIVNKNQYGNGA 448
PG+ F PT+ TDV M KEE FGP+++ + AD ++ + N ++G +
Sbjct: 396 RPGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLAS 451
Query: 449 AIFTSSGAAARKFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNF 506
+FT A +++AG V IN V PF F ++ F DL G+A +N
Sbjct: 452 GVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGF--KQSGFGKDL---GEAALNE 506
Query: 507 YTQIKTVTQQW 517
Y +IKTVT ++
Sbjct: 507 YLRIKTVTFEY 517
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 214/458 (46%), Gaps = 20/458 (4%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF---PSWRNTPIT 100
I + ++ S + +NP+T EV+ Q+ E+ AV AA+ AF WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGK-TLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R R++ +L +LI RD LA T + GK + D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+P + +Y+ EP+GVC I P+NFP ++ W A+ GN V+K +E+ P +
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHI-YARASAK 277
+ +A L EAG P GV+NIV G T AI ++ ++F GS G I A S+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSN 261
Query: 278 GKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGD-SKSWEDK 336
KRV +G K+ I++ GQ C A S D + ++
Sbjct: 262 LKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVER 321
Query: 337 LVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396
V RAK+ V ++ + GP + + ++I I +G + GA+LL G GY
Sbjct: 322 SVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY-- 379
Query: 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456
FI PT+ DV M KEEIFGPV+ ++ ++EE + N + YG AA+FT
Sbjct: 380 --FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 437
Query: 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAG 494
A ++AG V +N + G+++ F G
Sbjct: 438 KANYLSQALQAGTVWVNC--------YDVFGAQSPFGG 467
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 233/491 (47%), Gaps = 30/491 (6%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITT 101
IGG F+++ S+ + INP V+ Q+ L + AV+AAK+AF + W
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKT----LKDAQGDVFRGLEVVEHSCGM---AT 154
R R++ +L +++ + ++LA + G LK G + C AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 155 LQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEK 214
+ + + PN + T + +EP+GVC + P+N+P M+ W + GNT V+KP++
Sbjct: 160 IPINQARPNRNL---TLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 215 DPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYAR 273
P ++ AEL ++AG+P GV+NI+ G+ V + D ++R I F GS G HI
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 274 -ASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDS-- 330
A + K+V +G K+ I+ G+ +A +FV +S
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGR-LFVEESIH 335
Query: 331 KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390
+ K+VE + +K+ E D + GP + ++ Q G++ GA L+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP 395
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQ-AD-SLEEAIKIVNKNQYGNGA 448
PG+ F PT+ TDV M KEE FGP+++ + AD ++ + N ++G +
Sbjct: 396 RPGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLAS 451
Query: 449 AIFTSSGAAARKFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNF 506
+FT A +++AG V IN V PF F ++ F DL G+A +N
Sbjct: 452 GVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGF--KQSGFGKDL---GEAALNE 506
Query: 507 YTQIKTVTQQW 517
Y +IKTVT ++
Sbjct: 507 YLRIKTVTFEY 517
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 233/491 (47%), Gaps = 30/491 (6%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITT 101
IGG F+++ S+ + INP V+ Q+ L + AV+AAK+AF + W
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKT----LKDAQGDVFRGLEVVEHSCGM---AT 154
R R++ +L +++ + ++LA + G LK G + C AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 155 LQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEK 214
+ + + PN + T + +EP+GVC + P+N+P M+ W + GNT V+KP++
Sbjct: 160 IPINQARPNRNL---TLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 215 DPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYAR 273
P ++ AEL ++AG+P GV+NI+ G+ V + D ++R I F GS G HI
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 274 -ASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDS-- 330
A + K+V +G K+ I+ G+ +A +FV +S
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGR-LFVEESIH 335
Query: 331 KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390
+ K+VE + +K+ E D + GP + ++ Q G++ GA L+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP 395
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQ-AD-SLEEAIKIVNKNQYGNGA 448
PG+ F PT+ TDV M KEE FGP+++ + AD ++ + N ++G +
Sbjct: 396 RPGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLAS 451
Query: 449 AIFTSSGAAARKFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNF 506
+FT A +++AG V IN V PF F ++ F DL G+A +N
Sbjct: 452 GVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGF--KQSGFGKDL---GEAALNE 506
Query: 507 YTQIKTVTQQW 517
Y +IKTVT ++
Sbjct: 507 YLRIKTVTFEY 517
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 233/491 (47%), Gaps = 30/491 (6%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITT 101
IGG F+++ S+ + INP V+ Q+ L + AV+AAK+AF + W
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKT----LKDAQGDVFRGLEVVEHSCGM---AT 154
R R++ +L +++ + ++LA + G LK G + C AT
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 155 LQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEK 214
+ + + PN + T + +EP+GVC + P+N+P M+ W + GNT V+KP++
Sbjct: 160 IPINQARPNRNL---TLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 215 DPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYAR 273
P ++ AEL ++AG+P GV+NI+ G+ V + D ++R I F GS G HI
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 274 -ASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDS-- 330
A + K+V +G K+ I+ G+ +A +FV +S
Sbjct: 277 CALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGR-LFVEESIH 335
Query: 331 KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390
+ K+VE + +K+ E D + GP + ++ Q G++ GA L+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP 395
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQ-AD-SLEEAIKIVNKNQYGNGA 448
PG+ F PT+ TDV M KEE FGP+++ + AD ++ + N ++G +
Sbjct: 396 RPGF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLAS 451
Query: 449 AIFTSSGAAARKFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNF 506
+FT A +++AG V IN V PF F ++ F DL G+A +N
Sbjct: 452 GVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGF--KQSGFGKDL---GEAALNE 506
Query: 507 YTQIKTVTQQW 517
Y +IKTVT ++
Sbjct: 507 YLRIKTVTFEY 517
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 215/459 (46%), Gaps = 22/459 (4%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF---PSWRNTPIT 100
I + ++ S + +NP+T EV+ Q+ E+ AV AA+ AF WR +
Sbjct: 23 FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGK-TLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R R++ +L +LI RD LA T + GK + D+ L+ + + G A G+
Sbjct: 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+P + +Y+ EP+GVC I P+NFP ++ W A+ GN V+K +E+ P +
Sbjct: 143 TIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTA 201
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHI-YARASAK 277
+ +A L EAG P GV+NIV G T AI ++ ++F GS G I A S+
Sbjct: 202 LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSN 261
Query: 278 GKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDS--KSWED 335
KRV +G K+ I++ GQ C + FV + + +
Sbjct: 262 LKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ-CSCAGSRTFVQEDIYDEFVE 320
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395
+ V RAK+ V ++ + GP + + ++I I +G + GA+LL G GY
Sbjct: 321 RSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGY- 379
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
FI PT+ DV M KEEIFGPV+ ++ ++EE + N + YG AA+FT
Sbjct: 380 ---FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 456 AAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAG 494
A ++AG V +N + G+++ F G
Sbjct: 437 DKANYLSQALQAGTVWVNC--------YDVFGAQSPFGG 467
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 209/432 (48%), Gaps = 8/432 (1%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQR 104
IGG + + S +V +PAT E + +P E A+ AA+ A+ WR R
Sbjct: 17 IGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAA 76
Query: 105 VMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNV 164
++ + +L+ + D LA+ +TTEQGK L +A+G++ +E G+ +P
Sbjct: 77 ILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTP 136
Query: 165 SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAE 224
++EP+GVCA I P+NFPA + A+ G V+KP+E P +++ +A
Sbjct: 137 DANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAF 196
Query: 225 LAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARASAKGKRVQS 283
LA AG+P GVL++V G + I + +R +SF GS G + A+++ K++
Sbjct: 197 LAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTL 256
Query: 284 NMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDS--KSWEDKLVERA 341
+G IV GQ C+ + FV + ++ DKL
Sbjct: 257 ELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVC-TNRFFVHERVYDAFADKLAAAV 315
Query: 342 KALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIG 401
LKV GTE+ A LGP+I++ A +++ I + GA L+ G+ + HG F
Sbjct: 316 SKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHAL---GHG-FFE 371
Query: 402 PTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKF 461
PT+LT V DM+ KEE FGP+ + S EE +++ N ++G A +++ +
Sbjct: 372 PTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRV 431
Query: 462 QTEIEAGQVGIN 473
+E G VGIN
Sbjct: 432 AEALEYGMVGIN 443
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 145/492 (29%), Positives = 226/492 (45%), Gaps = 19/492 (3%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF-----PSWRNTP 98
I G + ++ I VINPATQ ++ +P T E+ AV+AAK A W
Sbjct: 11 FINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATAS 70
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
R R + + + +LA + + GK L +A D+ E+ +A
Sbjct: 71 GAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDA 130
Query: 159 EYVPNVSNGIDTYS---LREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKD 215
VS +DT+ LREP+GV I P+N+P ++ W A+ G +LKPSE
Sbjct: 131 RQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELA 190
Query: 216 PGASIMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARA 274
+ L E+ E GLP GVLNI+ G A + ++ ++F GS+ G I A
Sbjct: 191 SLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAA 250
Query: 275 SAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGD-SKSW 333
+ K V +G K+ +V GQ C A S ++ + +
Sbjct: 251 AQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEF 310
Query: 334 EDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
+++V+ K +K++ E LGPV+S+ E+I + + + GA +L G P
Sbjct: 311 LNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSR---PE 367
Query: 394 Y-EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452
+ + G FI PTI+TDVT +M+ ++EE+FGPVL + EEAI + N YG GAA+ +
Sbjct: 368 HLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVIS 427
Query: 453 SSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKAS-FAGDLNFYGKAGVNFYTQIK 511
+ + +AG V +N P + G K S F +L G+ G++ Y +K
Sbjct: 428 NDLERCERVTKAFKAGIVWVNCSQPC-FTQAPWGGVKRSGFGREL---GEWGLDNYLSVK 483
Query: 512 TVTQQWRDLPGG 523
VTQ + P G
Sbjct: 484 QVTQYISEEPWG 495
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 205/450 (45%), Gaps = 21/450 (4%)
Query: 54 SSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELI 113
S I + PA+ + +P + EE ++AK+A P+WR R + K+ +++
Sbjct: 16 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 114 RRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPN-----VSNGI 168
RD +K+ ++ E K K A +V R E++ ++ GE + S
Sbjct: 76 MRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKK 135
Query: 169 DTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAME 228
REP+G+ I PFN+P + A+ GN KP + + ++LAE E
Sbjct: 136 IAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE 195
Query: 229 AGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGA 287
AGLP GV N + G + + I + + I+F GS G I A + + +G
Sbjct: 196 AGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAGMR--PIMLELGG 253
Query: 288 KNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVE--RAKALK 345
K+ IVL GQRC A+ V+ + +S D+LVE R K L
Sbjct: 254 KDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVM---ESVADELVEKIREKVLA 310
Query: 346 VNAGT-EADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTI 404
+ G E DAD+ P+I ++ + + LI + GA L + + GN I P +
Sbjct: 311 LTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPIL 363
Query: 405 LTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTE 464
VT DM EE FGPVL ++ S+EEAI+I NK++YG A+IFT+ A +
Sbjct: 364 FDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQ 423
Query: 465 IEAGQVGINVPIPVPLPFFSFTGSKASFAG 494
+E G V IN F F G+K S AG
Sbjct: 424 LEVGTVHINNKTQRGTDNFPFLGAKKSGAG 453
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 205/450 (45%), Gaps = 21/450 (4%)
Query: 54 SSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELI 113
S I + PA+ + +P + EE ++AK+A P+WR R + K+ +++
Sbjct: 16 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 114 RRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPN-----VSNGI 168
RD +K+ ++ E K K A +V R E++ ++ GE + S
Sbjct: 76 MRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKK 135
Query: 169 DTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAME 228
REP+G+ I PFN+P + A+ GN KP + + ++LAE E
Sbjct: 136 IAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE 195
Query: 229 AGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGA 287
AGLP GV N + G + + I + + I+F GS G I A + + +G
Sbjct: 196 AGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAGMR--PIMLELGG 253
Query: 288 KNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVE--RAKALK 345
K+ IVL GQRC A+ V+ + +S D+LVE R K L
Sbjct: 254 KDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVM---ESVADELVEKIREKVLA 310
Query: 346 VNAGT-EADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTI 404
+ G E DAD+ P+I ++ + + LI + GA L + + GN I P +
Sbjct: 311 LTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPIL 363
Query: 405 LTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTE 464
VT DM EE FGPVL ++ S+EEAI+I NK++YG A+IFT+ A +
Sbjct: 364 FDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQ 423
Query: 465 IEAGQVGINVPIPVPLPFFSFTGSKASFAG 494
+E G V IN F F G+K S AG
Sbjct: 424 LEVGTVHINNKTQRGTDNFPFLGAKKSGAG 453
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 205/450 (45%), Gaps = 21/450 (4%)
Query: 54 SSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELI 113
S I + PA+ + +P + EE ++AK+A P+WR R + K+ +++
Sbjct: 16 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 114 RRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPN-----VSNGI 168
RD +K+ ++ E K K A +V R E++ ++ GE + S
Sbjct: 76 MRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKK 135
Query: 169 DTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAME 228
REP+G+ I PFN+P + A+ GN KP + + ++LAE E
Sbjct: 136 IAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE 195
Query: 229 AGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGA 287
AGLP GV N + G + + I + + I+F GS G I A + + +G
Sbjct: 196 AGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAGMR--PIMLALGG 253
Query: 288 KNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVE--RAKALK 345
K+ IVL GQRC A+ V+ + +S D+LVE R K L
Sbjct: 254 KDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVM---ESVADELVEKIREKVLA 310
Query: 346 VNAGT-EADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTI 404
+ G E DAD+ P+I ++ + + LI + GA L + + GN I P +
Sbjct: 311 LTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPIL 363
Query: 405 LTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTE 464
VT DM EE FGPVL ++ S+EEAI+I NK++YG A+IFT+ A +
Sbjct: 364 FDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQ 423
Query: 465 IEAGQVGINVPIPVPLPFFSFTGSKASFAG 494
+E G V IN F F G+K S AG
Sbjct: 424 LEVGTVHINNKTQRGTDNFPFLGAKKSGAG 453
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 143/491 (29%), Positives = 225/491 (45%), Gaps = 17/491 (3%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP-----SWRNTP 98
+ G + + V+NP T+ + ++P T E+ AAV+AA+ A W P
Sbjct: 28 FVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGRDWARAP 87
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
R + + + + +LA + GK +A D+ E+ A
Sbjct: 88 GAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQAEALDK 147
Query: 159 EYVPNVSNGIDTYSL---REPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKD 215
VS ++T+ REP+GV I P+N+P ++ W A+ G T VLKPSE
Sbjct: 148 RQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELA 207
Query: 216 PGASIMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARA 274
+ LA++ E GLP GVLNIV G A + ++ ++F GS G I A A
Sbjct: 208 SVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMASA 267
Query: 275 SAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTV-VFVGDSKSW 333
+ K V +G K+ +V GQ C A S + + +K +
Sbjct: 268 APMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHTKIAKKF 327
Query: 334 EDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
+++V AK +KV+ E LGPV+S+ E+I + I + GA +L G V P
Sbjct: 328 NERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGG---VRPA 384
Query: 394 Y-EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452
+ E G FI PTI+TD+T ME ++EE+FGPVL + + +EAI++ N QYG A+ +
Sbjct: 385 HLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVIS 444
Query: 453 SSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKT 512
++ EI+AG + +N P ++ F +L G+ G++ Y +K
Sbjct: 445 GDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGREL---GEGGIDNYLSVKQ 501
Query: 513 VTQQWRDLPGG 523
VT+ D P G
Sbjct: 502 VTEYISDEPWG 512
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 144/461 (31%), Positives = 210/461 (45%), Gaps = 23/461 (4%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQ 103
L G ++ESR+ E I + PA+ + +P + EE A+ AK A W+ PI R
Sbjct: 15 LRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERV 74
Query: 104 RVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMA------TLQM 157
++ +L+ + + I E K K A G+V R +++ H+ A TL+
Sbjct: 75 DLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKG 134
Query: 158 GEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPG 217
++ S I REPLGV I PFN+P + A+ GNT V KP+ +
Sbjct: 135 DQFKGGSSKKIALVE-REPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSL 193
Query: 218 ASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASA 276
+ I + E +AG P+G++ +V G + + + + I I+F G G I +A
Sbjct: 194 SGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA-- 251
Query: 277 KGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDK 336
K V +G K+ IVL GQRC A+ V FV DS + D+
Sbjct: 252 KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRV-FVQDSVA--DQ 308
Query: 337 LVERAKAL--KVNAGT-EADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
LV K L ++ G+ E DAD+ PVI +++ I LI +E+GA LL +
Sbjct: 309 LVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR----- 363
Query: 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTS 453
GN + PT+L DVT M EE FGPVL ++ EAI + N++ YG A+IFT
Sbjct: 364 --QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTK 421
Query: 454 SGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAG 494
A +E G V IN F F G K S G
Sbjct: 422 DTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLG 462
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 204/450 (45%), Gaps = 21/450 (4%)
Query: 54 SSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELI 113
S I + PA+ + +P + EE ++AK+A P+WR R + K+ +++
Sbjct: 16 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 114 RRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPN-----VSNGI 168
RD +K+ ++ E K K A +V R E++ ++ GE + S
Sbjct: 76 MRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKK 135
Query: 169 DTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAME 228
REP+G+ I PFN+P + A+ GN KP + + ++LAE E
Sbjct: 136 IAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE 195
Query: 229 AGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGA 287
AGLP GV N + G + + I + + I+F GS G I A + + +G
Sbjct: 196 AGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAGMR--PIMLELGG 253
Query: 288 KNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVE--RAKALK 345
K+ IVL GQR A+ V+ + +S D+LVE R K L
Sbjct: 254 KDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVM---ESVADELVEKIREKVLA 310
Query: 346 VNAGT-EADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTI 404
+ G E DAD+ P+I ++ + + LI + GA L + + GN I P +
Sbjct: 311 LTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPIL 363
Query: 405 LTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTE 464
VT DM EE FGPVL ++ S+EEAI+I NK++YG A+IFT+ A +
Sbjct: 364 FDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQ 423
Query: 465 IEAGQVGINVPIPVPLPFFSFTGSKASFAG 494
+E G V IN F F G+K S AG
Sbjct: 424 LEVGTVHINNKTQRGTDNFPFLGAKKSGAG 453
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 210/436 (48%), Gaps = 27/436 (6%)
Query: 49 FIESR--SSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVM 106
FI+ + + E +DVINP + EV+ ++P + EE K A+ A++ +N PIT R ++
Sbjct: 3 FIDGKWINREDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNIL 62
Query: 107 LKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSN 166
+ + + I+ ++LA + + GK +K A+ +V R + + + E +P S+
Sbjct: 63 MNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIP--SD 120
Query: 167 GIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELA 226
++ REP+G+ I PFNFP + A+ GN V PS K P I LA++
Sbjct: 121 DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKII 180
Query: 227 MEA----GLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
A +P GV N++ G + V + I + + ISF GS+ G I +A K++
Sbjct: 181 ENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAGF--KKI 238
Query: 282 QSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVE-- 339
+G N IVL GQ C+++ ++ +S DK +E
Sbjct: 239 ALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILV---DESIADKFIEMF 295
Query: 340 --RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHG 397
+AK L V + D+GP+IS + E + ++++ I+ G +LLL G+ Y
Sbjct: 296 VNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFY--- 352
Query: 398 NFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAA 457
PTIL +V D K E F PV+ ++ + EE I I N +YG +AIFT+
Sbjct: 353 ----PTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINK 406
Query: 458 ARKFQTEIEAGQVGIN 473
+ KF +E G V IN
Sbjct: 407 SLKFAENLEFGGVVIN 422
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 226/490 (46%), Gaps = 44/490 (8%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQR 104
I G + + + + VI+P+T+E + + L + + A++AAK+AF +W+ T R
Sbjct: 30 INGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLG 89
Query: 105 VMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNV 164
+ K+ E+ + +A I+ E G ++ + T ++ N
Sbjct: 90 FVEKILEIYEKRSSDMAKTISMEMGAP--------------IDMALNAQTATGSSHIRNF 135
Query: 165 SNGIDTYSLREPL--------------GVCAGICPFNFPA-MIPLWMFPVAVTCGNTFVL 209
+S +E L GV I P+N+P + L + P A+ G T VL
Sbjct: 136 IKAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIP-ALLAGCTMVL 194
Query: 210 KPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGM 268
KPSE P ++++ AE+ EA LP GV N+++G V + + ++ ISF GS AG
Sbjct: 195 KPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGK 254
Query: 269 HIYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVG 328
I AS KRV +G K I+ GQ C A + ++
Sbjct: 255 DISKNASNTLKRVCLELGGKGANIIF-ADADIDALQRGVRHCFYNSGQSCNAPTRMLV-- 311
Query: 329 DSKSWEDKLVERAKAL----KVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLL 384
++ DK ++ AK + +V G + +GPV+SK+ ++I LIQSGI+ GA L+
Sbjct: 312 -EQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVT 370
Query: 385 DGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQY 444
G + + G E G ++ PT+ DV M ++EEIFGPVL + ++ +EA+ + N +Y
Sbjct: 371 GGTGLPM-GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEY 429
Query: 445 GNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGV 504
G I + + R+ ++ +G V +N LP S+ G F+G G G+
Sbjct: 430 GLTNYIQSQDRSKCRRIAAQVRSGMVEVN---GHELPGGSYFGG-VKFSGRAREGGLWGI 485
Query: 505 NFYTQIKTVT 514
+ K ++
Sbjct: 486 KEFLDTKAIS 495
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 226/492 (45%), Gaps = 30/492 (6%)
Query: 42 PNLIGGAFIESRSSEYIDVINP-ATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPIT 100
P IGG +++++ E + +NP A EVV E +AA+ AA +AF +W++ P
Sbjct: 39 PLYIGGEWVDTK--ERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQE 96
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEY 160
R R++LK L+RR +L + E GK +A DV ++ +E+ A
Sbjct: 97 DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPA 156
Query: 161 VPNVSN-GIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
V V G D S PLG I P+NFP I M V GNT + KP+E
Sbjct: 157 VEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVG 216
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARAS--A 276
+ E+ EAG P GV+N + G + V A + + IR I+F GS G+ IY A A
Sbjct: 217 AKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLA 276
Query: 277 KG----KRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFV-GDSK 331
G KR G KN IV GQ+C A S ++ G +
Sbjct: 277 PGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYE 336
Query: 332 SWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV 391
+++++RA+ L V E + DLGPV+S + + ++ I+ G G +L+L G+ +
Sbjct: 337 PVLERVLKRAERLSVGPAEE-NPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEG 394
Query: 392 PGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451
GY FI PT+ T+V +EEIFGPVL ++ EA+++ N YG ++
Sbjct: 395 EGY----FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVY 450
Query: 452 TSSGAAARKFQTEIEAGQVGINVPIPVPL----PF--FSFTGSKASFAGDLNFYGKAGVN 505
+ + E G + N I L PF F +G+ A G L++ +
Sbjct: 451 SRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAK-TGALDY-----LR 504
Query: 506 FYTQIKTVTQQW 517
+ ++K V +++
Sbjct: 505 LFLEMKAVAERF 516
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 225/478 (47%), Gaps = 19/478 (3%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITT 101
IGG + + +S+ I+V PAT E V ++P+ + AAV+AA+ AF + W +TP
Sbjct: 12 FIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHE 71
Query: 102 RQRVMLKLQELI--RRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R V+ +++ R+D+ + T Q T+ + + + + G A
Sbjct: 72 RAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETM-HWMGSMGAMNYFAGAADKVTWT 130
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
S G S REP+GV I +N P + + A+ G T VLKP+ + P +
Sbjct: 131 ETRTGSYGQSIVS-REPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTA 189
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279
LAE+ E GLP+GVL++V G +T A+ + +I +F GS+ G + RA+ K
Sbjct: 190 NALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLK 249
Query: 280 RVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVE 339
+G K+ I+L GQ C+ + ++ +S D++V
Sbjct: 250 PCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRIL---APRSRYDEIVA 306
Query: 340 R----AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395
AL V ++ A +GP+IS++ + R+ I GIE GARL+ G G +
Sbjct: 307 AVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGR--PEGLD 364
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
+G FI PT+ DV M +EEIFGPVL + D+ E+AI I N + YG +++T+
Sbjct: 365 NGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDV 424
Query: 456 AAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
K +I G GIN P F G K S G N G GV +TQ K+V
Sbjct: 425 PKGIKISQQIRTGTYGIN--WYAFDPGSPFGGYKNSGIGREN--GPEGVEHFTQQKSV 478
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 145/492 (29%), Positives = 226/492 (45%), Gaps = 30/492 (6%)
Query: 42 PNLIGGAFIESRSSEYIDVINP-ATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPIT 100
P IGG +++++ E + +NP A EVV E +AA+ AA +AF +W++ P
Sbjct: 39 PLYIGGEWVDTK--ERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQE 96
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEY 160
R R++LK L+RR +L + E GK +A DV ++ +E+ A
Sbjct: 97 DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPA 156
Query: 161 VPNVSN-GIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
V V G D S PLG I P+NFP I M V GNT + KP+E
Sbjct: 157 VEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVG 216
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARAS--A 276
+ E+ EAG P GV+N + G + V A + + IR I+F GS G+ IY A A
Sbjct: 217 AKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLA 276
Query: 277 KG----KRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFV-GDSK 331
G KR G K+ IV GQ+C A S ++ G +
Sbjct: 277 PGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYE 336
Query: 332 SWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV 391
+++++RA+ L V E + DLGPV+S + + ++ I+ G G +L+L G+ +
Sbjct: 337 PVLERVLKRAERLSVGPAEE-NPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEG 394
Query: 392 PGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451
GY FI PT+ T+V +EEIFGPVL ++ EA+++ N YG ++
Sbjct: 395 EGY----FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVY 450
Query: 452 TSSGAAARKFQTEIEAGQVGINVPIPVPL----PF--FSFTGSKASFAGDLNFYGKAGVN 505
+ + E G + N I L PF F +G+ A G L++ +
Sbjct: 451 SRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAK-TGALDY-----LR 504
Query: 506 FYTQIKTVTQQW 517
+ ++K V +++
Sbjct: 505 LFLEMKAVAERF 516
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 218/487 (44%), Gaps = 20/487 (4%)
Query: 42 PNLIGGAFIESRSSEYIDVINPATQE-VVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPIT 100
P +I G + + I NPA ++ +V + + + A+ +A +AF +WRN
Sbjct: 39 PLIINGERVTTEDK--IQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPE 96
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSC-GMATLQMGE 159
R +++K +IRR + + + E GK K+A D ++ +E+ M L G+
Sbjct: 97 ERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGK 156
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+ + + Y P+GV I P+NF I + + GNT VLKP+ P +
Sbjct: 157 EILSRPGEQNRY-FYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVA 215
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASA-- 276
E+ +AGLP GV+N V G+ V + + D I+F GS G+ +Y RA+
Sbjct: 216 AKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVR 275
Query: 277 ----KGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGD-SK 331
KRV MG K+ +V GQ+C A S V D
Sbjct: 276 PGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYD 335
Query: 332 SWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV 391
+K V AK L V T D +GPVI ++A E+I I+ G + G RL+ G
Sbjct: 336 EVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSS 394
Query: 392 PGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451
G+ FI PTI+ D+ + +EEIFGPV+ +A+ + A++I N +YG A+
Sbjct: 395 TGF----FIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVI 450
Query: 452 TSSGAAARKFQTEIEAGQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510
T + A + + E G + N + + F G K S D G + + Q
Sbjct: 451 TRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMS-GTDSKAGGPDYLALHMQA 509
Query: 511 KTVTQQW 517
KTV++ +
Sbjct: 510 KTVSEMY 516
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 225/492 (45%), Gaps = 30/492 (6%)
Query: 42 PNLIGGAFIESRSSEYIDVINP-ATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPIT 100
P IGG +++++ E + +NP A EVV E +AA+ AA +AF +W++ P
Sbjct: 39 PLYIGGEWVDTK--ERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQE 96
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEY 160
R R++LK L+RR +L + E GK +A DV ++ +E+ A
Sbjct: 97 DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPA 156
Query: 161 VPNVSN-GIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
V V G D S PLG I P+NFP I M V GNT + KP+E
Sbjct: 157 VEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVG 216
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARAS--A 276
+ E+ EAG P GV+N + G + V A + + IR I+F GS G+ IY A A
Sbjct: 217 AKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLA 276
Query: 277 KG----KRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFV-GDSK 331
G KR G K+ IV GQ+ A S ++ G +
Sbjct: 277 PGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYE 336
Query: 332 SWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV 391
+++++RA+ L V E + DLGPV+S + + ++ I+ G G +L+L G+ +
Sbjct: 337 PVLERVLKRAERLSVGPAEE-NPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEG 394
Query: 392 PGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451
GY FI PT+ T+V +EEIFGPVL ++ EA+++ N YG ++
Sbjct: 395 EGY----FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVY 450
Query: 452 TSSGAAARKFQTEIEAGQVGINVPIPVPL----PF--FSFTGSKASFAGDLNFYGKAGVN 505
+ + E G + N I L PF F +G+ A G L++ +
Sbjct: 451 SRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAK-TGALDY-----LR 504
Query: 506 FYTQIKTVTQQW 517
+ ++K V +++
Sbjct: 505 LFLEMKAVAERF 516
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 218/486 (44%), Gaps = 17/486 (3%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
+ I G + S D++NP Q V++ L T ++ + A A++A W + R
Sbjct: 9 SFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDR 68
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG--EY 160
+ V+ K + + + D + M I E G T+ + ++ + + +++ + T ++G +
Sbjct: 69 KAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAM-TYTGELGGVKE 127
Query: 161 VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPS-EKDPGAS 219
VP+ G R PLGV + I PFNFP + + A+ GN+ V KP +
Sbjct: 128 VPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG 187
Query: 220 IMLAELAMEAGLPDGVLNI-VHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278
++A+ AGLP GVLN+ + + + + + R ISF GS G HI A
Sbjct: 188 TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAF 247
Query: 279 KRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGD-SKSWEDKL 337
KR+ +G N VL GQ CM ++ ++ D + +K
Sbjct: 248 KRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKF 307
Query: 338 VERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHG 397
R K L T+ +GP+I+++ E+ +I+ G L ++G+ + G
Sbjct: 308 TARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRV-------G 360
Query: 398 NFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAA 457
N + P + + + + E+F P+ ++A S +EAI + N +YG +A+FTS
Sbjct: 361 NVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEK 420
Query: 458 ARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK--TVTQ 515
KF +I++G +N P +F G+KAS G F V +T K ++ +
Sbjct: 421 GEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVG--RFGNPWVVEEFTVTKWISIQK 478
Query: 516 QWRDLP 521
Q+R P
Sbjct: 479 QYRKYP 484
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 199/444 (44%), Gaps = 22/444 (4%)
Query: 42 PNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPIT 100
P +I G E+ + I INPA +EVV + T + + A+ AA +AF +WR T
Sbjct: 39 PLVIDGERYETENK--IVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAFETWRYTDPE 96
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSC-GMATLQMGE 159
R V+ + +RR + + + E GK +A D ++ +E+ M L G+
Sbjct: 97 ERAAVLFRAVAKVRRKKHEFSALLVKEAGKPWNEADADTAEAIDFMEYYARQMIELAKGK 156
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
V N G + P GV I P+NF I + GNT VLKP+ P +
Sbjct: 157 PV-NSREGERNQYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIA 215
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARAS--- 275
E+ E+GLP GV+N V G+ V + + D I+F GS G I+ RA+
Sbjct: 216 AKFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQ 275
Query: 276 ---AKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKS 332
K+V + MG K+ +V GQ+C A S V K
Sbjct: 276 PGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVV--HEKV 333
Query: 333 WED---KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNI 389
+++ +++E ++ KV AD +GPVI + + +I I+ G E G RL+ G+
Sbjct: 334 YDEVLKRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEG-RLVSGGKGD 392
Query: 390 VVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAA 449
GY FI PTI D+ +EEIFGPV+ + S +EA+++ N +YG A
Sbjct: 393 DSKGY----FIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGA 448
Query: 450 IFTSSGAAARKFQTEIEAGQVGIN 473
+ T + + + E G + N
Sbjct: 449 VITKNRDHINRAKQEFHVGNLYFN 472
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 222/483 (45%), Gaps = 21/483 (4%)
Query: 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPI 99
R + +GG ++ + ++ V +PA+ + + E +AAV AA +AF WR
Sbjct: 12 RTDSFVGGRWLPAAAT--FPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSA 69
Query: 100 TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R ++ K L+ ++ D LA IT E GK LK+A G++ +E A G+
Sbjct: 70 KERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGD 129
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+ + L++P+GV A I P+NFP+ + A+ G T V+KP+E P ++
Sbjct: 130 IIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSA 189
Query: 220 IMLAELAMEAGLPDGVLNIV----HGTHDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275
+ LAELA +AG+P GV N++ + AIC D + ISF GS G + A+
Sbjct: 190 LALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAA 249
Query: 276 AKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALST-VVFVGDSKSWE 334
KRV +G IV GQ C+ + +V G ++
Sbjct: 250 NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFV 309
Query: 335 DKLVERAKA-LKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
E K L+V G E GP+I+++A E++ + + + GA ++ G+
Sbjct: 310 KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR----- 364
Query: 394 YEHG-NFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452
++ G NF PT+L +VT DM C EE FGP+ ++ D+ EEAI I N G ++
Sbjct: 365 HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYS 424
Query: 453 SSGAAARKFQTEIEAGQVGINVPI--PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510
A + ++E G VG+N + V PF S G K G++ Y ++
Sbjct: 425 QDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGS-----KYGIDEYLEL 479
Query: 511 KTV 513
K V
Sbjct: 480 KYV 482
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 213/466 (45%), Gaps = 24/466 (5%)
Query: 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120
+NPAT + ++ P +E + A+S A F W+ T + R + + + + +R ++
Sbjct: 12 VNPATGQTLAAXPWANAQEIEHALSLAASGFKKWKXTSVAQRAQTLRDIGQALRAHAEEX 71
Query: 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVC 180
A IT E GK +K A+ +V + + + + V N R PLGV
Sbjct: 72 AQCITREXGKPIKQARAEVTKSAALCDWYAEHGPAXLNPEPTLVENQQAVIEYR-PLGVI 130
Query: 181 AGICPFNFPAMIPLWMF-----PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGV 235
I P+NFP LW P+ + GN+++LK + G + +A + EAG P GV
Sbjct: 131 LAIXPWNFP----LWQVLRGAVPI-LLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGV 185
Query: 236 LNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP 295
V+ ++ V+ +D I A++ GS AG I A+A A K+ +G + IVL
Sbjct: 186 YGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLN 245
Query: 296 XXXXXXXXXXXXXXXXXXXGQRCMALST-VVFVGDSKSWEDKLVERAKALKVNAGTEADA 354
GQ C A +V G ++++ D+ V A ALK +
Sbjct: 246 DADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEEN 305
Query: 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMEC 414
DLGP ++ + + +Q+ + GARLLL G I GN+ T+L DVT D
Sbjct: 306 DLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIA----GEGNYYAATVLADVTPDXTA 361
Query: 415 YKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINV 474
+++E+FGPV A A+ + N +++G A IFT+ A + +E G V IN
Sbjct: 362 FRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFIN- 420
Query: 475 PIPVPLPFFSFTGSKAS-FAGDLNFYGKAGVNFYTQIKTVTQQWRD 519
+F G K S F +L+ + G++ + ++TV W++
Sbjct: 421 GYSASDARVAFGGVKKSGFGRELSHF---GLHEFCNVQTV---WKN 460
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 205/462 (44%), Gaps = 11/462 (2%)
Query: 39 PRVPNL---IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWR 95
P + NL IGG + +S DV NPAT V++++P E+ AAV A + A
Sbjct: 7 PLLENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTN 66
Query: 96 NTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATL 155
PI TR++ + +++ ++ + +++ + E GK K+AQG+V ++ +
Sbjct: 67 PWPIETRRKWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKHISA 126
Query: 156 QMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKD 215
+P P+GV I P+NFP A+ G V+KP+ +
Sbjct: 127 LDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASET 186
Query: 216 PGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAI-CDDANIRAISFVGSNVAGMHIYARA 274
P I + + LPDG +N+V G + + C+ ++ +SF GS G +
Sbjct: 187 PLTXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDT 246
Query: 275 SAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGD--SKS 332
+ + K++ +G IV GQ C+ + +FV + + +
Sbjct: 247 AEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVC-ANRIFVHEKVADA 305
Query: 333 WEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVP 392
+ KL ER V G D+GP+I+KQ +++ R +Q ++ GA L+ G+
Sbjct: 306 FGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVA-GKQPAEL 364
Query: 393 GYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452
G G F PT++ V + CY+EE FGP++ + EE I N ++G + +FT
Sbjct: 365 G--DGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFT 422
Query: 453 SSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAG 494
+ A++ + G VG N P P F G KAS G
Sbjct: 423 ADAERAQRVAAGLRFGHVGWNTGTG-PTPEAPFGGXKASGIG 463
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 223/483 (46%), Gaps = 21/483 (4%)
Query: 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPI 99
R + +GG ++ + ++ V +PA+ + + E +AAV AA +AF WR
Sbjct: 12 RTDSFVGGRWLPAAAT--FPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSA 69
Query: 100 TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R ++ K L+ ++ D LA IT E GK LK+A G++ +E A G+
Sbjct: 70 KERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGD 129
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+ + L++P+GV A I P+NFP+ + A+ G T V+KP+E P ++
Sbjct: 130 IIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSA 189
Query: 220 IMLAELAMEAGLPDGVLNIV----HGTHDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275
+ LAELA +AG+P GV N++ + AIC D + ISF GS G + A+
Sbjct: 190 LALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAA 249
Query: 276 AKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALST-VVFVGDSKSWE 334
KRV +G IV GQ + + +V G ++
Sbjct: 250 NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIHDAFV 309
Query: 335 DKLVERAKA-LKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
E K L+V G E GP+I+++A E++ + + + GA ++ G+
Sbjct: 310 KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR----- 364
Query: 394 YEHG-NFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452
++ G NF PT+L +VT DM C EE FGP+ ++ D+ EEAI I N G ++
Sbjct: 365 HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYS 424
Query: 453 SSGAAARKFQTEIEAGQVGINVPI--PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510
A + ++E G VG+N + V P F G K S G K G++ Y ++
Sbjct: 425 QDPAQIWRVAEQLEVGMVGVNEGLISSVECP---FGGVKQSGLGREG--SKYGIDEYLEL 479
Query: 511 KTV 513
K V
Sbjct: 480 KYV 482
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 206/466 (44%), Gaps = 27/466 (5%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAA-KQAFPSWRNT 97
P P+ + G + S + I+V +P ++++ + EE + + K+ S R+
Sbjct: 17 PVYPSYLAGEW--GGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDM 74
Query: 98 PITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM 157
P T R V+ K ++I R++D A + GK A G+V ++ + +A L +
Sbjct: 75 PGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLR----LAELDL 130
Query: 158 ----GEYVPN--VSNGIDTYSL--REPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVL 209
G+Y+P + ++T L REPLGV A I PFN+P + + GN V+
Sbjct: 131 KKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVV 190
Query: 210 KPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMH 269
KPS DP + M + ++AG P + +++ I D + A+SF GS G
Sbjct: 191 KPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGER 250
Query: 270 IYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGD 329
+ K+ +G + IVL GQRC A+ V+
Sbjct: 251 VVKVGGV--KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLA--- 305
Query: 330 SKSWEDKLVE----RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLD 385
+ KLVE R +L+V + D+GP+IS A + + I+ +E G R+L
Sbjct: 306 ERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAG 365
Query: 386 GRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYG 445
GR + P Y F+ D DM YK E+F PV L ++ L++AI++ N YG
Sbjct: 366 GRRL-GPTYVQPTFVEAP--ADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYG 422
Query: 446 NGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKAS 491
AA+F R+ +E G + IN + ++ F G K S
Sbjct: 423 LDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKS 468
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 208/469 (44%), Gaps = 33/469 (7%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAA-KQAFPSWRNT 97
P P+ + G + S + I+V +P ++++ + EE + + K+ S R+
Sbjct: 17 PVYPSYLAGEW--GGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDM 74
Query: 98 PITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM 157
P T R V+ K ++I R++D A + GK A G+V ++ + +A L +
Sbjct: 75 PGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLR----LAELDL 130
Query: 158 ----GEYVPN--VSNGIDTYSL--REPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVL 209
G+Y+P + ++T L REPLGV A I PFN+P + + GN V+
Sbjct: 131 KKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVV 190
Query: 210 KPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMH 269
KPS DP + M + ++AG P + +++ I D + A+SF GS G
Sbjct: 191 KPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGER 250
Query: 270 IYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGD 329
+ K+ +G + IVL GQRC A+ V+
Sbjct: 251 VVKVGGV--KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLA--- 305
Query: 330 SKSWEDKLVE----RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLD 385
+ KLVE R +L+V + D+GP+IS A + + I+ +E G R+L
Sbjct: 306 ERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAG 365
Query: 386 GRNIVVPGYEHGNFIGPTIL---TDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKN 442
GR + ++ PT++ D DM YK E+F PV L ++ L++AI++ N
Sbjct: 366 GRRL------GPTYVQPTLVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGR 419
Query: 443 QYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKAS 491
YG AA+F R+ +E G + IN + ++ F G K S
Sbjct: 420 PYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKS 468
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 198/460 (43%), Gaps = 12/460 (2%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
+LIGG ++E S INP V+++ + + AA AAK+A W TP R
Sbjct: 15 HLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAER 74
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
++ + EL+ +++ + E G T A ++ + + S G P
Sbjct: 75 SAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGRISP 134
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDP-GASIM 221
+ + G + R GV I P+NFP + + A+ GN V+KP+ P ++
Sbjct: 135 SNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVI 194
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKG-- 278
A + EAG+P GV++ V G + + A + ISF GS G + A G
Sbjct: 195 PARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPM 254
Query: 279 KRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVF-VGDSKSWEDKL 337
K V +G +VL GQ CM+++ V+ + +K
Sbjct: 255 KTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKF 314
Query: 338 VERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHG 397
VE K + + +GPVI+ + I+ + GA + V G G
Sbjct: 315 VEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGA-------TVQVEGPIEG 367
Query: 398 NFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAA 457
+ P + +DVT+DME +EEIFGP++ ++AD A ++ N + +G AA+++
Sbjct: 368 RLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDR 427
Query: 458 ARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLN 497
A +F +I++G V IN P F GSK S G N
Sbjct: 428 AAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFN 467
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 194/438 (44%), Gaps = 18/438 (4%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQ 103
LIG F E+ + ++NP T + L ++ + AAV AA++AF W T R
Sbjct: 29 LIGSRF-EAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERS 87
Query: 104 RVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM-----G 158
+LK+ + I ++ D+ A GK + + D + A + G
Sbjct: 88 NALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAG 147
Query: 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
EY+P ++ I R+P+G+ I P+N+P W A+ GNT V KPSE+ P
Sbjct: 148 EYLPGHTSXI----RRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLT 203
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAK 277
++ LA L + LP+GV+N++ G +TV NA+ + + +S G G + A A+
Sbjct: 204 ALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAAAAKT 262
Query: 278 GKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVF-VGDSKSWEDK 336
KR +G K IV GQ C A + G +
Sbjct: 263 VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVAD 322
Query: 337 LVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGA-RLLLDGRNIVVPGYE 395
L ++ N + + ++GP+IS++ ++R+ ++ + + GR G +
Sbjct: 323 LTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRT----GSD 378
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
G F PT++ T + E + E+FGPV+ + ++A+ N + YG ++++T
Sbjct: 379 EGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDI 438
Query: 456 AAARKFQTEIEAGQVGIN 473
+ A + + ++ G IN
Sbjct: 439 SKAXRAASRLQYGCTWIN 456
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 200/445 (44%), Gaps = 24/445 (5%)
Query: 42 PNLIGGAFIESRSSEYIDVINP-ATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPIT 100
P I G E R+++ I +NP EV+ Q+ E A++AAK AFP+WR+T
Sbjct: 533 PLFINGK--EVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPR 590
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSC-GMATLQMGE 159
TR +LK + R+ + +L+ E GK A DV ++ +E+ M L +
Sbjct: 591 TRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQ 650
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
V + ++ Y EP GV A I P+NFP I + M A+ GN V KPS
Sbjct: 651 RVGHAPGELNHY-FYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIG 709
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARAS--- 275
L EL EAGLP+GV N G + + + D +I I+F GS G+ I RA+
Sbjct: 710 WHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVH 769
Query: 276 ---AKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKS 332
A K++ S MG KN I+ GQ+C A S V+ + +
Sbjct: 770 PGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVL---DA 826
Query: 333 WEDKLVER----AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRN 388
DK +ER AKA KV + +G V +A + I + G G L
Sbjct: 827 VYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLY----E 882
Query: 389 IVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGA 448
VP E G F+ TI+ + + +EEIFGPVL M+A ++AI+ N Q+
Sbjct: 883 SPVPAGE-GYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTG 941
Query: 449 AIFTSSGAAARKFQTEIEAGQVGIN 473
IF+ S K + E G + IN
Sbjct: 942 GIFSRSPEHLAKARREFRVGNLYIN 966
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 139/482 (28%), Positives = 213/482 (44%), Gaps = 29/482 (6%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQ 103
LI G + S E V NPAT +V+ ++ + E+ AAV AA AF W T R
Sbjct: 27 LINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRA 85
Query: 104 RVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGL-EVVEHSCGMAT----LQMG 158
+LKL ++I + A + GK L A D + +V G A L G
Sbjct: 86 ECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAG 145
Query: 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
EY+ ++ I R+PLGV A I P+N+P M+ W A+ GN VLKPSE P
Sbjct: 146 EYLEGHTSMIR----RDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT 201
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAK 277
++ LAELA + P GV+NI+ G TV + + +R +S GS G HI + ++
Sbjct: 202 ALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASS 260
Query: 278 GKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKL 337
KR +G K IV GQ C A + K D L
Sbjct: 261 IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIY---AQKGIYDTL 317
Query: 338 VERAKA----LKVNAGTEADADLGPVISKQAKERICRLIQSGIESGA-RLLLDGRNIVVP 392
VE+ A LK A + +LGP+ S ER+ + ++ +G +++ G
Sbjct: 318 VEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGN 377
Query: 393 GYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452
GY + PT+L D ++E+FGPV+ D+ E+ + N +QYG ++++T
Sbjct: 378 GY----YYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWT 433
Query: 453 SSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKAS-FAGDLNFYGKAGVNFYTQIK 511
A + ++ G +N + + G K S + D++ Y G+ YT ++
Sbjct: 434 KDVGRAHRVSARLQYGCTWVNTHFML-VSEMPHGGQKLSGYGKDMSLY---GLEDYTVVR 489
Query: 512 TV 513
V
Sbjct: 490 HV 491
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 207/469 (44%), Gaps = 33/469 (7%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAA-KQAFPSWRNT 97
P P+ + G + S + I+V +P ++++ + EE + + K+ S R+
Sbjct: 17 PVYPSYLAGEW--GGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDM 74
Query: 98 PITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM 157
P T R V+ K ++I R++D A + GK A G+V ++ + +A L +
Sbjct: 75 PGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLR----LAELDL 130
Query: 158 ----GEYVPN--VSNGIDTYSL--REPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVL 209
G+Y+P + ++T L REPLGV A I PFN+P + + GN V+
Sbjct: 131 KKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVV 190
Query: 210 KPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMH 269
KPS DP + M + ++AG P + +++ I D + A+SF GS G
Sbjct: 191 KPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGER 250
Query: 270 IYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGD 329
+ K+ +G + IVL GQRC A+ V+
Sbjct: 251 VVKVGGV--KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLA--- 305
Query: 330 SKSWEDKLVE----RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLD 385
+ KLVE R +L+V + D+GP+IS A + + I+ +E G R+L
Sbjct: 306 ERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAG 365
Query: 386 GRNIVVPGYEHGNFIGPTIL---TDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKN 442
GR + ++ PT++ D DM YK E+F PV ++ L++AI++ N
Sbjct: 366 GRRL------GPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGR 419
Query: 443 QYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKAS 491
YG AA+F R+ +E G + IN + ++ F G K S
Sbjct: 420 PYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKS 468
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 184/417 (44%), Gaps = 12/417 (2%)
Query: 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120
+NP T E + T+++ A++ A + WR+ +R ++ + ++ D+L
Sbjct: 9 VNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDEL 68
Query: 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVC 180
A T E GK L +++ +V + + + + N G + Y L++ GV
Sbjct: 69 AKXXTLEXGKLLSESKEEVELCVSICNYYADHGPEXLKPTKLNSDLG-NAYYLKQSTGVI 127
Query: 181 AGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVH 240
P+NFP + +F GN +LK + PG++ + A++ AG P+G L ++
Sbjct: 128 XACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLY 187
Query: 241 GTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXX 300
++D + I D I+ ++ GS G + A K+ +G + IVL
Sbjct: 188 PSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTXELGGNDAFIVLDDADPQ 247
Query: 301 XXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVERAK----ALKVNAGTEADADL 356
GQ C + ++ KS D+++ K LK EAD L
Sbjct: 248 VLRNVLNDARTYNDGQVCTSSKRIIV---EKSRYDEVLHELKNVFSNLKAGDPLEADTTL 304
Query: 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYK 416
P S++AKE++ ++ I++GA++ I G F PTILTD+ D +
Sbjct: 305 PPXNSEKAKEKLEAQVKEAIDAGAKVFYQYPEID----SKGAFFRPTILTDIAKDNPVFD 360
Query: 417 EEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN 473
+E+FGP+ + AI++ N + YG G+++ S A+K +IE G IN
Sbjct: 361 KEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTVIN 417
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 221/516 (42%), Gaps = 26/516 (5%)
Query: 24 KFSTDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAA 83
K+S +L + NP GG S E I PA E ++++ T E++
Sbjct: 9 KYSWLKELGLSEDNPGVYNGSWGG------SGEVITSYCPANNEPIARVTQATLAEYEET 62
Query: 84 VSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGL 143
V ++A+ W + P R ++ ++ + +R+ I L ++ E GK + G+V +
Sbjct: 63 VQKTREAWKMWADIPAPKRGEIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGVGEVQEYV 122
Query: 144 EVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTC 203
+V +++ G++ + G +P+ G P+G+ I FNFP + W +A+TC
Sbjct: 123 DVCDYAVGLSRMIGGPVLPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIALTC 182
Query: 204 GNTFVLKPSEKDPGASI----MLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAIS 259
GN + K + P S+ ++AE+ + LP + ++ G D A+ D + +S
Sbjct: 183 GNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCGGADIGTAMAKDERVDLLS 242
Query: 260 FVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCM 319
F GS G + + R +G N IV GQRC
Sbjct: 243 FTGSTHVGKMVAMMVQERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCT 302
Query: 320 ALSTVVFVGDSKSWEDKLVER-AKALK-VNAGTEADAD--LGPVISKQAKERICRLIQSG 375
++ +S D +VER AKA K V G D GP+ +KQA ++ I+
Sbjct: 303 TTRRLML---HESVHDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQA 359
Query: 376 IESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435
+ G L+ G+ + P GN++ PTI+T + D E F P+L ++ + EEA
Sbjct: 360 KQQGGTLVCGGKVMDRP----GNYVEPTIITGLAHDAPIVHTETFVPILYVLKFKTEEEA 415
Query: 436 IKIVNKNQYGNGAAIFTSS-GAAARKFQTE-IEAGQVGINVPIPVPLPFFSFTGSKASFA 493
N+ Q G ++IFT G R + + G V +N+P +F G K +
Sbjct: 416 FAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGG 475
Query: 494 GDLNFYGKAGVNFYTQIKTVTQQW-RDLPGGSGVSL 528
G + G Y + T T + +DLP G+
Sbjct: 476 GRES--GSDSWKQYMRRSTCTINYSKDLPLAQGIKF 509
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 195/444 (43%), Gaps = 29/444 (6%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
+ I G ++ + E ++ ++P Q VV + AAV AA++AFP+W P+ R
Sbjct: 8 HYIAGQWLAGQG-ETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQR 66
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
++ + ++ D+LA I E GK L ++ +V + V S + GE
Sbjct: 67 IELLERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNKVAISVQAFRERTGEKSG 126
Query: 163 NVSNGIDTYSLR-EPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
+++ T LR +P GV A P+NFP +P A+ GN V KPSE P + +
Sbjct: 127 PLADA--TAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAEL 184
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
+ ++AGLP GVLN+V G +T A+ + + F GS+ G ++++ + +++
Sbjct: 185 TLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKI 244
Query: 282 QS-NMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVER 340
+ G N +V GQRC ++ +W D L+ R
Sbjct: 245 LALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLV--PQGAWGDALLAR 302
Query: 341 AKA----LKVNAGTEADADL-GPVISKQAKERICRLIQSGIESGARLLL------DGRNI 389
A L+V E A G VIS A E + + + I GA+ LL DG +
Sbjct: 303 LVAVSATLRVGRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDGAAL 362
Query: 390 VVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAA 449
+ PG + DV+A E EE FGP+L ++ AI+ N QYG A
Sbjct: 363 LTPG-----------ILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAG 411
Query: 450 IFTSSGAAARKFQTEIEAGQVGIN 473
+ + S +F E AG V N
Sbjct: 412 LLSDSRERFEQFLVESRAGIVNWN 435
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 194/451 (43%), Gaps = 21/451 (4%)
Query: 56 EYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRR 115
E I PA E ++++ + +++ V A++A+ W + P R ++ ++ + +R
Sbjct: 37 EVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALRE 96
Query: 116 DIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLRE 175
I L ++ E GK L + G+V +++ +++ G++ + G +P+ +G
Sbjct: 97 KIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWN 156
Query: 176 PLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI----MLAELAMEAGL 231
P+G+ I FNFP + W +A+ CGN + K + S+ ++A++ + L
Sbjct: 157 PVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKL 216
Query: 232 PDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHG 291
P + ++ G D A+ D + +SF GS G + + R +G N
Sbjct: 217 PGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAI 276
Query: 292 IVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVERAKA--LKVNAG 349
I GQRC + +F+ +S D++V R K ++ G
Sbjct: 277 IAFEDADLSLVVPSALFAAVGTAGQRCTT-ARRLFIHESI--HDEVVNRLKKAYAQIRVG 333
Query: 350 TEADADL--GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTD 407
D ++ GP+ +KQA ++ + G ++ G+ + P GN++ PTI+T
Sbjct: 334 NPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRP----GNYVEPTIVTG 389
Query: 408 VTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQ----T 463
+ D E F P+L + + EE N+ + G ++IFT R F+
Sbjct: 390 LGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKD--LGRIFRWLGPK 447
Query: 464 EIEAGQVGINVPIPVPLPFFSFTGSKASFAG 494
+ G V +N+P +F G K + G
Sbjct: 448 GSDCGIVNVNIPTSGAEIGGAFGGEKHTGGG 478
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 192/460 (41%), Gaps = 29/460 (6%)
Query: 83 AVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFR 141
AV A+ AF S R P+ R + + LQ LI+ +L + + K +A +V
Sbjct: 23 AVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVY 82
Query: 142 GLEVVEHSCG----MATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197
LE +E+ A + E P + Y EPLGV I +N+P + +
Sbjct: 83 VLEEIEYMIQKLPEWAADEPVEKTPQTQQD-ELYIHSEPLGVVLVIGTWNYPFNLTIQPM 141
Query: 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRA 257
A+ GN VLKPSE + +LA + + D I G +T + +
Sbjct: 142 VGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKE--RFDH 199
Query: 258 ISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQR 317
I + GS G I A+ V +G K+ V GQ
Sbjct: 200 ILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQT 259
Query: 318 CMALSTVVFVGDSKSWEDKLVER-AKALKVNAGTEADA--DLGPVISKQAKERICRLIQS 374
C+A ++ S ++++VE+ K+LK G +A D G +IS + +R+ LI+
Sbjct: 260 CVAPDYILC---DPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIE- 315
Query: 375 GIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434
G ++ G G +I PTILTDV +EEIFGPVL + SLEE
Sbjct: 316 ----GQKVAYGGT-----GDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEE 366
Query: 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN-VPIPVPLPFFSFTGSKASFA 493
AI+ +N+ + +F+S+ +K E +G V N V + + L F G S
Sbjct: 367 AIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGM 426
Query: 494 GDLNFYGKAGVNFYTQIKTVTQQWRDLPGGSGVSLAMPTS 533
G +++GK ++ ++ R L G+ + P S
Sbjct: 427 G--SYHGKKSFETFSHRRSCLV--RPLMNDEGLKVRYPPS 462
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 177/424 (41%), Gaps = 25/424 (5%)
Query: 87 AKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGK-TLKDAQGDVFRGLEV 145
A++A W+ + R + + ++ I ++L + + G+ ++ + D F L
Sbjct: 37 ARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSITVLEIDSF--LAS 94
Query: 146 VEHSCGMATLQMGEYVPNVSNGIDTYSLRE---PLGVCAGICPFNFPAMIPLWMFPVAVT 202
++ CG+A + N S I +L++ P + I P+NFP + A+
Sbjct: 95 IDRWCGLAPELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSXIDTIPALL 152
Query: 203 CGNTFVLKPSEKDPG-ASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFV 261
G V+KPSE P + +L L L D VL V G +T + + + + F
Sbjct: 153 AGCAVVVKPSEIAPRFVAPLLXALNTVPELRD-VLIFVEGGGETGANLINYVDF--VCFT 209
Query: 262 GSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMAL 321
GS G + A+ + +G K+ IVL GQ C+++
Sbjct: 210 GSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSI 269
Query: 322 STVVFVGDSKSWE--DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESG 379
+ +V +SK E +L+ +A L++ D +GP+I+++ I I +E G
Sbjct: 270 ERI-YVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKG 328
Query: 380 ARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIV 439
A + G+ V G + PT+ T+V + EE FGP+ +EEA+ +
Sbjct: 329 AVIHCGGK---VEELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVYLA 385
Query: 440 NKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFY 499
N YG AA+F S A K ++ AG + IN L G K +F NF
Sbjct: 386 NDTIYGLSAAVFAGSEDEALKVARQLNAGAISIN---DAALTAXXHEGEKNAF----NFS 438
Query: 500 GKAG 503
G G
Sbjct: 439 GLGG 442
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 159/391 (40%), Gaps = 24/391 (6%)
Query: 94 WRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMA 153
W TP R + + L+ + E GKTL DA ++ + +
Sbjct: 566 WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQG 625
Query: 154 TLQMGE--YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKP 211
G +P + + ++R GV I P+NFP I L A+ GN+ V KP
Sbjct: 626 RKLFGSETAMPGPTGESNALTMRG-RGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKP 684
Query: 212 SEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIY 271
+E+ P + L EAG+P L +V G A+ +I + F GS I
Sbjct: 685 AEQTPRIAREAVALLHEAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSIN 744
Query: 272 ARASAKGKRVQ---SNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVG 328
+AK + + G N I GQRC AL ++FV
Sbjct: 745 RALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALR-LLFVQ 803
Query: 329 DSKSWEDKLVER----AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLL 384
+ + D+++E A+ LK+ ++ +GPVI +AK+R+ I + +++ ARL
Sbjct: 804 EDVA--DRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHI-ARMKTEARLHF 860
Query: 385 DGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCM--QADSLEEAIKIVNKN 442
G P E G F+ P I A EE+FGP+L + + ++LE ++ + +
Sbjct: 861 AG-----PAPE-GCFVAPHIFELTEAGQ--LTEEVFGPILHVVRYRPENLERVLRAIERT 912
Query: 443 QYGNGAAIFTSSGAAARKFQTEIEAGQVGIN 473
YG + + + ++ G + +N
Sbjct: 913 GYGLTLGVHSRIDDSIEAIIDRVQVGNIYVN 943
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 190/443 (42%), Gaps = 38/443 (8%)
Query: 85 SAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLE 144
SA K F + + R++ + +L+E + + + L + + GK DV E
Sbjct: 35 SAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKP-----KDVVDLAE 89
Query: 145 V--VEHSCGMATLQMGEYV-------PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLW 195
+ V H A + E+V P++ + Y ++EP GV I PFN+P + L
Sbjct: 90 IGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLT 149
Query: 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANI 255
A+ GNT ++KPSE P S ++ ++ EA P+ V ++ G D N+
Sbjct: 150 PLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYV-AVIQGGRDE-NSHLLSLPF 207
Query: 256 RAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXG 315
I F GS G + A+ V +G K IVLP G
Sbjct: 208 DFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSG 267
Query: 316 QRCMALSTV-VFVGDSKSWEDKLVERAKAL--KVNAGTEADADLGPVISKQAKERICRLI 372
Q C+A + V + ++LVER K ++N+ G +++++ +R+ L+
Sbjct: 268 QTCIAPDYLYVHYSVKDALLERLVERVKTELPEINS-------TGKLVTERQVQRLVSLL 320
Query: 373 QSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSL 432
++ + ++L+ + V + T++ V + EE+FGP+L ++ DS+
Sbjct: 321 EA---TQGQVLVGSQADV-----SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSV 372
Query: 433 EEAIKIVNKNQYGNGAA-IFTSSGAAARKFQTEIEAGQVGIN-VPIPVPLPFFSFTGSKA 490
AI VNK+ A +F A+ +I++G +N V + P+ F G A
Sbjct: 373 RTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGA 432
Query: 491 SFAGDLNFYGKAGVNFYTQIKTV 513
S G+ ++G +T K+V
Sbjct: 433 SGMGE--YHGHFSYLTFTHKKSV 453
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 186/439 (42%), Gaps = 29/439 (6%)
Query: 84 VSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKT-LKDAQGDVFRG 142
V A++AF S + + R + + LQ +I ++ ++ + ++ GK +V
Sbjct: 7 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 66
Query: 143 LEVVEHSCG-MATLQMGEYVPNV--SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPV 199
LE ++ + + E V + D Y EPLGV I +N+P + +
Sbjct: 67 LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 126
Query: 200 AVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAIS 259
AV GN +LKPSE + +LA L + + L + G +T + + I
Sbjct: 127 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKE--RFDHIM 184
Query: 260 FVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCM 319
+ GS G + A A+ V +G K+ V GQ C+
Sbjct: 185 YTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCV 244
Query: 320 ALSTVVFVGDSKSWEDKLVER-AKALKVNAGTEADA--DLGPVISKQAKERICRLIQSGI 376
A ++ S ++++VE+ K+LK G +A D G +I+ + +R+
Sbjct: 245 APDYILC---DPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRV-------- 293
Query: 377 ESGARLLLDGRNIVVPGY--EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434
+ L+D + + G + +I PTIL DV +EEIFGPV+ + SLEE
Sbjct: 294 ----KGLIDNQKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEE 349
Query: 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN-VPIPVPLPFFSFTGSKASFA 493
AI+ +N+ + +F+++ +K E +G V N V + + +P F G S
Sbjct: 350 AIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGM 409
Query: 494 GDLNFYGKAGVNFYTQIKT 512
G ++GK ++ ++
Sbjct: 410 G--AYHGKKSFETFSHRRS 426
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 189/443 (42%), Gaps = 38/443 (8%)
Query: 85 SAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLE 144
SA K F + + R++ + +L+E + + + L + + GK DV E
Sbjct: 35 SAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKP-----KDVVDLAE 89
Query: 145 V--VEHSCGMATLQMGEYV-------PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLW 195
+ V H A + E+V P++ + Y ++EP GV I PFN+P + L
Sbjct: 90 IGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLT 149
Query: 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANI 255
A+ GNT ++KPSE P S ++ ++ EA P+ V ++ G D N+
Sbjct: 150 PLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYV-AVIQGGRDE-NSHLLSLPF 207
Query: 256 RAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXG 315
I F GS G + A+ V +G K IVLP G
Sbjct: 208 DFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSG 267
Query: 316 QRCMALSTV-VFVGDSKSWEDKLVERAKAL--KVNAGTEADADLGPVISKQAKERICRLI 372
Q +A + V + ++LVER K ++N+ G +++++ +R+ L+
Sbjct: 268 QTXIAPDYLYVHYSVKDALLERLVERVKTELPEINS-------TGKLVTERQVQRLVSLL 320
Query: 373 QSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSL 432
++ + ++L+ + V + T++ V + EE+FGP+L ++ DS+
Sbjct: 321 EA---TQGQVLVGSQADV-----SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSV 372
Query: 433 EEAIKIVNKNQYGNGAA-IFTSSGAAARKFQTEIEAGQVGIN-VPIPVPLPFFSFTGSKA 490
AI VNK+ A +F A+ +I++G +N V + P+ F G A
Sbjct: 373 RTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGA 432
Query: 491 SFAGDLNFYGKAGVNFYTQIKTV 513
S G+ ++G +T K+V
Sbjct: 433 SGMGE--YHGHFSYLTFTHKKSV 453
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 155/400 (38%), Gaps = 42/400 (10%)
Query: 83 AVSAAKQAFPSWRNTPITTRQRVMLKLQELIR--RDIDKLAMNITTEQGKTLKDAQGDVF 140
A+ AA A W P+ R +V LK +++ R + LA + QGKT+ A+ D
Sbjct: 105 AIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVG-QGKTVIQAEIDAA 163
Query: 141 RGL-EVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAM------IP 193
L + + A GE +V + R G A I PFNF A+ P
Sbjct: 164 AELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAP 223
Query: 194 LWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDD 252
M GN + KPS+ AS + + EAGLP ++ V T + +
Sbjct: 224 ALM-------GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSS 276
Query: 253 ANIRAISFVGSNVAGMHIYARASAKGKRVQS------NMGAKNHGIVLPXXXXXXXXXXX 306
++ I+F GS H++ + + R ++ G KN V
Sbjct: 277 EHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGT 336
Query: 307 XXXXXXXXGQRCMALSTVVFVGDSKSW---EDKLVERAKALKVNAGTEADADLG----PV 359
GQ+C A S ++V S W + +L+E +KV E D G V
Sbjct: 337 LRSAFEYGGQKCSACSR-LYVPKSL-WPQIKGRLLEEHSRIKVGDPAE---DFGTFFSAV 391
Query: 360 ISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEI 419
I +A RI + ++ S + +L G G ++ P I+ KEEI
Sbjct: 392 IDAKAFARIKKWLEHARSSPSLSILAGGQC---NESVGYYVEPCIIESKDPQEPIMKEEI 448
Query: 420 FGPVL--LCMQADSLEEAIKIVNK-NQYGNGAAIFTSSGA 456
FGPVL D E +K+V+ YG A+F A
Sbjct: 449 FGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKA 488
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 160/402 (39%), Gaps = 46/402 (11%)
Query: 77 NEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIR--RDIDKLAMNITTEQGKTLKD 134
N+ +AA++A K+ W PI R ++ LK +++ R + LA + QGKT+
Sbjct: 106 NKAIEAALAARKE----WDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVG-QGKTVIQ 160
Query: 135 AQGDVFRGL-EVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAM-- 191
A+ D L + + A G+ +V ++ R G A I PFNF A+
Sbjct: 161 AEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGG 220
Query: 192 ----IPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV- 246
P M GN + KPS+ AS + + EAGLP ++ V
Sbjct: 221 NLAGAPALM-------GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFG 273
Query: 247 NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQS------NMGAKNHGIVLPXXXXX 300
+ + ++ I+F GS H++ + + R + G KN V
Sbjct: 274 DTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVE 333
Query: 301 XXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSW---EDKLVERAKALKVNAGTEADADLG 357
GQ+C A S ++V S W + +L+E +KV E D G
Sbjct: 334 SVVSGTLRSAFEYGGQKCSACSR-LYVPHSL-WPQIKGRLLEEHSRIKVGDPAE---DFG 388
Query: 358 ----PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADME 413
VI ++ RI + ++ S + +L G G F+ P I+
Sbjct: 389 TFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKC---DDSVGYFVEPCIVESKDPQEP 445
Query: 414 CYKEEIFGPVL--LCMQADSLEEAIKIVNK-NQYGNGAAIFT 452
KEEIFGPVL D +E +++V+ YG A+F+
Sbjct: 446 IMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFS 487
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 160/402 (39%), Gaps = 46/402 (11%)
Query: 77 NEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIR--RDIDKLAMNITTEQGKTLKD 134
N+ +AA++A K+ W PI R ++ LK +++ R + LA + QGKT+
Sbjct: 106 NKAIEAALAARKE----WDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVG-QGKTVIQ 160
Query: 135 AQGDVFRGL-EVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAM-- 191
A+ D L + + A G+ +V ++ R G A I PFNF A+
Sbjct: 161 AEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGG 220
Query: 192 ----IPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV- 246
P M GN + KPS+ AS + + EAGLP ++ V
Sbjct: 221 NLAGAPALM-------GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFG 273
Query: 247 NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQS------NMGAKNHGIVLPXXXXX 300
+ + ++ I+F GS H++ + + R + G KN V
Sbjct: 274 DTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVE 333
Query: 301 XXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSW---EDKLVERAKALKVNAGTEADADLG 357
GQ+C A + ++V S W + +L+E +KV E D G
Sbjct: 334 SVVSGTLRSAFEYGGQKCSACAR-LYVPHSL-WPQIKGRLLEEHSRIKVGDPAE---DFG 388
Query: 358 ----PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADME 413
VI ++ RI + ++ S + +L G G F+ P I+
Sbjct: 389 TFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKC---DDSVGYFVEPCIVESKDPQEP 445
Query: 414 CYKEEIFGPVL--LCMQADSLEEAIKIVNK-NQYGNGAAIFT 452
KEEIFGPVL D +E +++V+ YG A+F+
Sbjct: 446 IMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFS 487
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 159/402 (39%), Gaps = 46/402 (11%)
Query: 77 NEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIR--RDIDKLAMNITTEQGKTLKD 134
N+ +AA++A K+ W PI R ++ LK +++ R + LA + QGKT+
Sbjct: 106 NKAIEAALAARKE----WDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVG-QGKTVIQ 160
Query: 135 AQGDVFRGL-EVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAM-- 191
A+ D L + + A G+ +V ++ R G A I PFNF A+
Sbjct: 161 AEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGG 220
Query: 192 ----IPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV- 246
P M GN + KPS+ AS + + EAGLP ++ V
Sbjct: 221 NLAGAPALM-------GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFG 273
Query: 247 NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQS------NMGAKNHGIVLPXXXXX 300
+ + ++ I+F GS H++ + + R + G KN V
Sbjct: 274 DTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVE 333
Query: 301 XXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSW---EDKLVERAKALKVNAGTEADADLG 357
GQ+C A ++V S W + +L+E +KV E D G
Sbjct: 334 SVVSGTLRSAFEYGGQKCSA-CLRLYVPHSL-WPQIKGRLLEEHSRIKVGDPAE---DFG 388
Query: 358 ----PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADME 413
VI ++ RI + ++ S + +L G G F+ P I+
Sbjct: 389 TFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKC---DDSVGYFVEPCIVESKDPQEP 445
Query: 414 CYKEEIFGPVL--LCMQADSLEEAIKIVNK-NQYGNGAAIFT 452
KEEIFGPVL D +E +++V+ YG A+F+
Sbjct: 446 IMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFS 487
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 176 PLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI----MLAELAMEAGL 231
PLGV AG+ P P ++ +++ GN+ V P A + +++E A +AG
Sbjct: 108 PLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGC 167
Query: 232 PDGVLN 237
P G ++
Sbjct: 168 PKGAIS 173
>pdb|1O20|A Chain A, Crystal Structure Of Gamma-glutamyl Phosphate Reductase
(tm0293) From Thermotoga Maritima At 2.00 A Resolution
Length = 427
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAI 450
V G E I P + V A + + E ++ +++EAI+ + K G+ +I
Sbjct: 298 VRGCEKTREIVPDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESI 354
Query: 451 FTSSGAAARKFQTEIEAGQVGIN 473
T + + A+KF +EI+A V +N
Sbjct: 355 LTENYSNAKKFVSEIDAAAVYVN 377
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 420 FGPVLLCMQADSL-EEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEI 465
+G VLLC + + E+AIK++ K+Q+ G ++ KF EI
Sbjct: 49 YGEVLLCKEKNGHSEKAIKVIKKSQFDKGR--YSDDNKNIEKFHEEI 93
>pdb|2YDA|A Chain A, Sulfolobus Sulfataricus 2-Keto-3-Deoxygluconate Aldolase
Y103f,Y130f, A198f Variant
pdb|2YDA|B Chain B, Sulfolobus Sulfataricus 2-Keto-3-Deoxygluconate Aldolase
Y103f,Y130f, A198f Variant
Length = 294
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 65/172 (37%), Gaps = 42/172 (24%)
Query: 97 TPITT---------RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVE 147
TPI T ++++ + + LIR+ IDKL +N TT G +L + L+ V
Sbjct: 6 TPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEK--LENLKAVY 63
Query: 148 HSCGMATLQMGEYVPNVSNGIDTYSLREPLGVC--AGICPFNFPAMI------------- 192
Q+G N+ + I L + + A P+ +P M
Sbjct: 64 DVTNKIIFQVGGL--NLDDAIRLAKLSKDFDIVGIASYAPYFYPRMSEKHLVKYFKTLCE 121
Query: 193 ----PLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVH 240
P+++F G KD A + E+ G+ D + NI+H
Sbjct: 122 VSPHPVYLFNYPTATG---------KDIDAKVA-KEIGCFTGVKDTIENIIH 163
>pdb|1W3I|A Chain A, Sulfolobus Solfataricus 2-Keto-3-Deoxygluconate (Kdg)
Aldolase Complex With Pyruvate
pdb|1W3I|B Chain B, Sulfolobus Solfataricus 2-Keto-3-Deoxygluconate (Kdg)
Aldolase Complex With Pyruvate
pdb|1W3I|C Chain C, Sulfolobus Solfataricus 2-Keto-3-Deoxygluconate (Kdg)
Aldolase Complex With Pyruvate
pdb|1W3I|D Chain D, Sulfolobus Solfataricus 2-Keto-3-Deoxygluconate (Kdg)
Aldolase Complex With Pyruvate
Length = 293
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 65/172 (37%), Gaps = 42/172 (24%)
Query: 97 TPITT---------RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVE 147
TPI T ++++ + + LIR+ IDKL +N TT G +L + L+ V
Sbjct: 5 TPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEK--LENLKAVY 62
Query: 148 HSCGMATLQMGEYVPNVSNGIDTYSLREPLGVC--AGICPFNFPAMI------------- 192
Q+G N+ + I L + + A P+ +P M
Sbjct: 63 DVTNKIIFQVGGL--NLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCE 120
Query: 193 ----PLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVH 240
P++++ G KD A + E+ G+ D + NI+H
Sbjct: 121 VSPHPVYLYNYPTATG---------KDIDAKVA-KEIGCFTGVKDTIENIIH 162
>pdb|1W37|A Chain A, 2-Keto-3-Deoxygluconate(Kdg) Aldolase Of Sulfolobus
Solfataricus
pdb|1W37|B Chain B, 2-Keto-3-Deoxygluconate(Kdg) Aldolase Of Sulfolobus
Solfataricus
pdb|1W37|C Chain C, 2-Keto-3-Deoxygluconate(Kdg) Aldolase Of Sulfolobus
Solfataricus
pdb|1W37|D Chain D, 2-Keto-3-Deoxygluconate(Kdg) Aldolase Of Sulfolobus
Solfataricus
pdb|1W3N|A Chain A, Sulfolobus Solfataricus 2-Keto-3-Deoxygluconate (Kdg)
Aldolase Complex With D-Kdg
pdb|1W3N|B Chain B, Sulfolobus Solfataricus 2-Keto-3-Deoxygluconate (Kdg)
Aldolase Complex With D-Kdg
pdb|1W3N|C Chain C, Sulfolobus Solfataricus 2-Keto-3-Deoxygluconate (Kdg)
Aldolase Complex With D-Kdg
pdb|1W3N|D Chain D, Sulfolobus Solfataricus 2-Keto-3-Deoxygluconate (Kdg)
Aldolase Complex With D-Kdg
pdb|1W3T|A Chain A, Sulfolobus Solfataricus 2-Keto-3-Deoxygluconate (Kdg)
Aldolase Complex With D-Kdgal, D-Glyceraldehyde And
Pyruvate
pdb|1W3T|B Chain B, Sulfolobus Solfataricus 2-Keto-3-Deoxygluconate (Kdg)
Aldolase Complex With D-Kdgal, D-Glyceraldehyde And
Pyruvate
pdb|1W3T|C Chain C, Sulfolobus Solfataricus 2-Keto-3-Deoxygluconate (Kdg)
Aldolase Complex With D-Kdgal, D-Glyceraldehyde And
Pyruvate
pdb|1W3T|D Chain D, Sulfolobus Solfataricus 2-Keto-3-Deoxygluconate (Kdg)
Aldolase Complex With D-Kdgal, D-Glyceraldehyde And
Pyruvate
Length = 294
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 65/172 (37%), Gaps = 42/172 (24%)
Query: 97 TPITT---------RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVE 147
TPI T ++++ + + LIR+ IDKL +N TT G +L + L+ V
Sbjct: 6 TPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEK--LENLKAVY 63
Query: 148 HSCGMATLQMGEYVPNVSNGIDTYSLREPLGVC--AGICPFNFPAMI------------- 192
Q+G N+ + I L + + A P+ +P M
Sbjct: 64 DVTNKIIFQVGGL--NLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCE 121
Query: 193 ----PLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVH 240
P++++ G KD A + E+ G+ D + NI+H
Sbjct: 122 VSPHPVYLYNYPTATG---------KDIDAKVA-KEIGCFTGVKDTIENIIH 163
>pdb|2ITB|A Chain A, Crystal Structure Of A Putative
Trna-(Ms(2)io(6)a)-Hydroxylase (Pp_2188) From
Pseudomonas Putida Kt2440 At 2.05 A Resolution
pdb|2ITB|B Chain B, Crystal Structure Of A Putative
Trna-(Ms(2)io(6)a)-Hydroxylase (Pp_2188) From
Pseudomonas Putida Kt2440 At 2.05 A Resolution
Length = 206
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 17 VRPQIFAKFSTDAKLYSKQHNPPR-VPNLIGGAFIESRSSEYIDVINPATQE 67
+RP ++++ + + H P + V L+ GAFIE+RS E + P E
Sbjct: 88 LRPVSAGRYASGLRRLVRAHEPVKLVDTLVVGAFIEARSCERFAALVPHLDE 139
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,674,502
Number of Sequences: 62578
Number of extensions: 593874
Number of successful extensions: 1864
Number of sequences better than 100.0: 92
Number of HSP's better than 100.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1482
Number of HSP's gapped (non-prelim): 95
length of query: 535
length of database: 14,973,337
effective HSP length: 103
effective length of query: 432
effective length of database: 8,527,803
effective search space: 3684010896
effective search space used: 3684010896
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)