Query 009407
Match_columns 535
No_of_seqs 241 out of 1920
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 04:30:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009407.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009407hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 7E-111 2E-115 898.3 54.4 479 38-520 4-486 (490)
2 4e4g_A Methylmalonate-semialde 100.0 6E-107 2E-111 874.8 54.4 494 38-532 24-519 (521)
3 3ifg_A Succinate-semialdehyde 100.0 8E-106 3E-110 860.5 53.1 468 41-515 13-482 (484)
4 3ed6_A Betaine aldehyde dehydr 100.0 2E-105 6E-110 863.5 55.6 477 39-518 31-511 (520)
5 3rh9_A Succinate-semialdehyde 100.0 4E-105 1E-109 858.1 55.2 472 39-517 10-484 (506)
6 3ek1_A Aldehyde dehydrogenase; 100.0 2E-105 8E-110 859.4 51.9 468 41-517 33-502 (504)
7 3k2w_A Betaine-aldehyde dehydr 100.0 7E-105 2E-109 856.5 54.0 477 39-518 11-489 (497)
8 4f3x_A Putative aldehyde dehyd 100.0 5E-105 2E-109 856.4 52.3 471 38-517 23-497 (498)
9 2o2p_A Formyltetrahydrofolate 100.0 3E-104 9E-109 853.7 53.4 469 42-517 38-517 (517)
10 3u4j_A NAD-dependent aldehyde 100.0 5E-104 2E-108 853.3 55.9 474 39-518 21-499 (528)
11 3iwj_A Putative aminoaldehyde 100.0 1E-103 4E-108 848.4 57.0 476 38-518 5-490 (503)
12 1a4s_A ALDH, betaine aldehyde 100.0 7E-104 2E-108 849.1 55.5 478 38-519 17-498 (503)
13 1t90_A MMSDH, probable methylm 100.0 6E-104 2E-108 847.6 54.2 478 38-518 3-481 (486)
14 3prl_A NADP-dependent glyceral 100.0 5E-104 2E-108 850.2 53.3 466 41-518 12-484 (505)
15 3r31_A BADH, betaine aldehyde 100.0 3E-104 9E-109 853.7 50.2 471 39-517 13-488 (517)
16 3jz4_A Succinate-semialdehyde 100.0 2E-103 7E-108 843.0 56.5 469 41-516 10-480 (481)
17 3b4w_A Aldehyde dehydrogenase; 100.0 1E-103 5E-108 845.4 53.2 473 42-521 10-486 (495)
18 1bxs_A Aldehyde dehydrogenase; 100.0 4E-103 1E-107 842.5 55.9 469 41-517 21-496 (501)
19 2imp_A Lactaldehyde dehydrogen 100.0 3E-103 9E-108 841.7 54.0 471 39-516 5-478 (479)
20 3i44_A Aldehyde dehydrogenase; 100.0 4E-103 1E-107 841.6 54.7 467 40-514 25-495 (497)
21 2d4e_A 5-carboxymethyl-2-hydro 100.0 6E-103 2E-107 844.2 56.1 472 42-517 28-505 (515)
22 1wnd_A Putative betaine aldehy 100.0 3E-103 1E-107 841.8 53.4 472 35-516 18-494 (495)
23 3qan_A 1-pyrroline-5-carboxyla 100.0 4E-103 1E-107 848.1 54.6 471 39-518 36-517 (538)
24 1o04_A Aldehyde dehydrogenase, 100.0 3E-103 1E-107 842.5 52.9 468 42-517 21-495 (500)
25 2ve5_A BADH, betaine aldehyde 100.0 7E-103 2E-107 841.1 54.4 477 38-518 4-484 (490)
26 2j6l_A Aldehyde dehydrogenase 100.0 1E-102 4E-107 839.5 54.3 480 30-517 13-499 (500)
27 4dng_A Uncharacterized aldehyd 100.0 2E-102 7E-107 836.5 51.9 470 39-517 5-478 (485)
28 3r64_A NAD dependent benzaldeh 100.0 3E-102 9E-107 838.5 52.2 471 38-518 10-486 (508)
29 3pqa_A Lactaldehyde dehydrogen 100.0 3E-102 1E-106 832.3 51.9 457 43-517 2-464 (486)
30 2w8n_A Succinate-semialdehyde 100.0 4E-102 1E-106 832.8 51.0 465 42-516 14-485 (487)
31 1uxt_A Glyceraldehyde-3-phosph 100.0 1E-101 3E-106 832.0 50.6 464 41-517 19-492 (501)
32 1uzb_A 1-pyrroline-5-carboxyla 100.0 5E-101 2E-105 830.2 54.7 468 40-516 37-515 (516)
33 3ros_A NAD-dependent aldehyde 100.0 3E-101 9E-106 824.7 51.7 452 57-517 5-458 (484)
34 1euh_A NADP dependent non phos 100.0 3E-101 1E-105 825.1 51.4 463 40-517 4-474 (475)
35 3ty7_A Putative aldehyde dehyd 100.0 3E-101 1E-105 826.0 47.3 466 40-515 7-475 (478)
36 3etf_A Putative succinate-semi 100.0 3.7E-99 1E-103 807.1 53.4 455 54-516 5-460 (462)
37 3ju8_A Succinylglutamic semial 100.0 5.8E-99 2E-103 809.7 53.3 461 42-517 7-471 (490)
38 4e3x_A Delta-1-pyrroline-5-car 100.0 9.6E-99 3E-103 815.7 51.3 472 38-517 61-551 (563)
39 4h7n_A Aldehyde dehydrogenase; 100.0 4.6E-98 2E-102 800.2 49.8 457 54-517 4-463 (474)
40 4f9i_A Proline dehydrogenase/d 100.0 4.2E-96 1E-100 835.8 52.6 471 39-517 530-1010(1026)
41 2y53_A Aldehyde dehydrogenase 100.0 9.5E-96 3E-100 792.6 46.8 468 40-515 7-517 (534)
42 3lns_A Benzaldehyde dehydrogen 100.0 3.2E-94 1.1E-98 767.0 50.1 443 56-515 6-455 (457)
43 3sza_A Aldehyde dehydrogenase, 100.0 1.1E-92 3.6E-97 756.1 49.6 428 75-517 15-448 (469)
44 3v4c_A Aldehyde dehydrogenase 100.0 4.6E-92 1.6E-96 762.7 45.1 458 38-517 27-517 (528)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 1.7E-89 5.7E-94 739.7 46.9 446 52-515 3-481 (510)
46 3haz_A Proline dehydrogenase; 100.0 7.6E-88 2.6E-92 766.3 50.2 435 72-517 544-987 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 1.4E-82 4.8E-87 676.5 26.9 406 59-517 10-435 (463)
48 3k9d_A LMO1179 protein, aldehy 100.0 2.3E-79 7.9E-84 653.8 29.4 419 70-518 4-450 (464)
49 1vlu_A Gamma-glutamyl phosphat 100.0 4.9E-79 1.7E-83 650.1 20.6 394 79-517 15-440 (468)
50 1o20_A Gamma-glutamyl phosphat 100.0 5.8E-77 2E-81 628.5 27.2 388 76-517 12-422 (427)
51 4ghk_A Gamma-glutamyl phosphat 100.0 1.4E-76 4.9E-81 628.5 28.2 389 77-517 25-439 (444)
52 3my7_A Alcohol dehydrogenase/a 100.0 2.1E-75 7.3E-80 621.3 28.6 415 72-515 1-447 (452)
53 4gic_A HDH, histidinol dehydro 97.8 0.035 1.2E-06 56.5 30.3 333 93-513 26-399 (423)
54 1kae_A HDH, histidinol dehydro 97.0 0.35 1.2E-05 49.3 29.2 259 167-514 114-393 (434)
55 2fiu_A Conserved hypothetical 71.7 8.7 0.0003 30.8 6.3 60 361-444 16-76 (99)
56 1b93_A Protein (methylglyoxal 66.8 14 0.00046 32.2 6.8 114 178-315 12-135 (152)
57 2xw6_A MGS, methylglyoxal synt 66.3 4.3 0.00015 34.6 3.5 81 196-285 23-112 (134)
58 2yvq_A Carbamoyl-phosphate syn 56.0 16 0.00056 31.2 5.4 62 223-285 60-132 (143)
59 3lo3_A Uncharacterized conserv 55.8 20 0.0007 28.2 5.6 60 361-444 15-75 (94)
60 3mwd_B ATP-citrate synthase; A 53.2 1E+02 0.0035 30.3 11.3 125 201-343 166-317 (334)
61 1vmd_A MGS, methylglyoxal synt 51.4 17 0.00058 32.4 4.8 120 172-315 21-151 (178)
62 3v42_A Folliculin; tumor suppr 51.3 8.2 0.00028 36.0 2.8 65 194-265 21-85 (226)
63 3hhl_A RPA0582; alpha-beta-bar 47.1 31 0.0011 29.5 5.7 66 358-444 44-110 (143)
64 2ixa_A Alpha-N-acetylgalactosa 38.7 3.2E+02 0.011 27.5 14.9 133 199-349 37-172 (444)
65 2i2c_A Probable inorganic poly 34.2 46 0.0016 31.6 5.3 88 207-311 5-95 (272)
66 2ioj_A Hypothetical protein AF 33.0 25 0.00086 29.6 2.9 48 234-281 53-101 (139)
67 1s7i_A Hypothetical protein PA 32.9 88 0.003 25.9 6.2 74 363-445 30-108 (124)
68 2bon_A Lipid kinase; DAG kinas 31.8 1.2E+02 0.0042 29.4 8.2 105 206-311 33-146 (332)
69 3u3x_A Oxidoreductase; structu 28.2 2.1E+02 0.0072 28.0 9.2 87 246-348 80-169 (361)
70 2pjk_A 178AA long hypothetical 27.3 27 0.00093 31.0 2.1 56 213-268 36-95 (178)
71 3rfq_A Pterin-4-alpha-carbinol 26.5 18 0.00061 32.6 0.7 54 215-268 47-103 (185)
72 3ufx_B Succinyl-COA synthetase 25.8 3.6E+02 0.012 27.0 10.5 82 204-288 248-343 (397)
73 3ip3_A Oxidoreductase, putativ 24.8 1.1E+02 0.0038 29.6 6.4 60 219-285 39-98 (337)
74 1y5e_A Molybdenum cofactor bio 22.3 70 0.0024 27.9 3.9 52 216-267 30-85 (169)
75 2nu8_B SCS-beta, succinyl-COA 21.9 4.4E+02 0.015 26.2 10.2 83 203-289 256-353 (388)
76 3fgh_A Transcription factor A, 21.9 1.2E+02 0.0041 21.6 4.5 35 87-121 30-64 (67)
77 2zfz_A Arginine repressor; DNA 20.8 68 0.0023 24.3 3.0 37 202-242 19-55 (79)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=7.2e-111 Score=898.34 Aligned_cols=479 Identities=31% Similarity=0.508 Sum_probs=451.4
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
+++.++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|+++++.|++++
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 34567899999999888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
++|++++++|+|||+.+++. |+..+++.++|++++.+.+.++..+ ...+...+++|+|+|||++|+|||||+++++++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~ 162 (490)
T 2wme_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP-LRETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEE-EETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccc-ccCCcceeEEecceeEEEEeccccCcchhhhhh
Confidence 99999999999999999986 6999999999999988887766655 345667888999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHH-HH
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYA-RA 274 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~-~a 274 (535)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ .++++.|+.||+|++|+||||+.+|+.|++ .+
T Consensus 163 ~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a 242 (490)
T 2wme_A 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS 242 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999994 678999999999999999999999998876 55
Q ss_pred hcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 275 SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 275 ~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+||+++ +|+|+++|+++++++++|+|.|++
T Consensus 243 ~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~ 322 (490)
T 2wme_A 243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDEN 322 (490)
T ss_dssp HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCcccc
Confidence 6779999999999999999999999999999999999999999999999988888 899999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+++|||+++.+++++.++|++++++|+++++||.........+|+|++|||+.++++||++++||+||||++|++|+|+|
T Consensus 323 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 402 (490)
T 2wme_A 323 TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDED 402 (490)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHH
T ss_pred CccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHH
Confidence 99999999999999999999999999999999987654444579999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++||++||+.|+|
T Consensus 403 eAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~-~~~~~PFGG~k~SG~G--re~G~~gl~~ft~~K~v 479 (490)
T 2wme_A 403 EAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE-SPAEMPVGGYKQSGVG--RENGLTTLAHYTRIKSV 479 (490)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC-CCTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEE
T ss_pred HHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCC-CCCCCCcccccccccC--chhHHHHHHHhhceeEE
Confidence 99999999999999999999999999999999999999998653 3478999999999999 57999999999999999
Q ss_pred EeccCCC
Q 009407 514 TQQWRDL 520 (535)
Q Consensus 514 ~~~~~~~ 520 (535)
++++.|.
T Consensus 480 ~i~~g~~ 486 (490)
T 2wme_A 480 QVELGDY 486 (490)
T ss_dssp EEECSCC
T ss_pred EEECCCC
Confidence 9987543
No 2
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.3e-107 Score=874.79 Aligned_cols=494 Identities=47% Similarity=0.817 Sum_probs=456.1
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
|..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 103 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNM 103 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45568999999998877889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
++|++++++|+|||..+++.|+..+++.+++++...+++.++..+....+...++.++|+|||++|+|||||++++++++
T Consensus 104 ~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 183 (521)
T 4e4g_A 104 NELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMF 183 (521)
T ss_dssp HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHH
Confidence 99999999999999999999999999999999988887766544322345678899999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.+.++.|+.||+||+|+||||+.+|+.|++.++++
T Consensus 184 a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~ 263 (521)
T 4e4g_A 184 APAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMN 263 (521)
T ss_dssp HHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999888889999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC--hhHHHHHHHHHHhcccccCCCCCCCC
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD--SKSWEDKLVERAKALKVNAGTEADAD 355 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~--~d~f~~~l~~~~~~l~vG~p~~~~~~ 355 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+||+++ +|+|+++|+++++++++|+|.|++++
T Consensus 264 lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~ 343 (521)
T 4e4g_A 264 GKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKAD 343 (521)
T ss_dssp TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCS
T ss_pred CCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCc
Confidence 9999999999999999999999999999999999999999999999988887 69999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
+||++++.+++++.++|++++++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 344 ~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 423 (521)
T 4e4g_A 344 MGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEA 423 (521)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999997532222247999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|+++|||++||||+|.++++++++++++|+|+||+++.+..+.+||||+|.||+|+.+++|++|+++||+.|+|+.
T Consensus 424 i~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~ 503 (521)
T 4e4g_A 424 LSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITS 503 (521)
T ss_dssp HHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEE
Confidence 99999999999999999999999999999999999999987555578999999999999766899999999999999999
Q ss_pred ccCCCCCCCCcCCCCCC
Q 009407 516 QWRDLPGGSGVSLAMPT 532 (535)
Q Consensus 516 ~~~~~~~~~~~~~~~~~ 532 (535)
+|.+... .+..+.+|+
T Consensus 504 ~~~~~~~-~~~~~~~~~ 519 (521)
T 4e4g_A 504 RWPSGIK-DGAEFSIPT 519 (521)
T ss_dssp CCCCCSC-C--------
T ss_pred ecCcccc-ccccccccc
Confidence 8865521 223456654
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=7.6e-106 Score=860.53 Aligned_cols=468 Identities=30% Similarity=0.479 Sum_probs=444.3
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 13 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 92 (484)
T 3ifg_A 13 HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDL 92 (484)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35799999998777889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhh
Q 009407 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA 200 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 200 (535)
++++++|+|||..+++.|+..+++.+++++...+...+...+....+...+++++|+|||++|+|||||+.+.++++++|
T Consensus 93 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~A 172 (484)
T 3ifg_A 93 ALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPA 172 (484)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHH
Confidence 99999999999999999999999999999988776665554423346678899999999999999999999999999999
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCC
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~ 279 (535)
|++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .++++.|++||+|++|+||||+.+|+.|++.+++++|
T Consensus 173 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k 252 (484)
T 3ifg_A 173 LAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVK 252 (484)
T ss_dssp HHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTC
T ss_pred HHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCC
Confidence 999999999999999999999999999999999999999995 5789999999999999999999999999999999999
Q ss_pred eEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCC
Q 009407 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGP 358 (535)
Q Consensus 280 ~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gp 358 (535)
|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++||
T Consensus 253 ~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp 332 (484)
T 3ifg_A 253 KLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGP 332 (484)
T ss_dssp EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCC
T ss_pred ceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999988888 89999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHH
Q 009407 359 VISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKI 438 (535)
Q Consensus 359 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~ 438 (535)
|+++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 333 li~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 408 (484)
T 3ifg_A 333 LINEAAVKKVESHIADALAKGASLMTGGKRHA----LGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRL 408 (484)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTCEEEECCSBCT----TCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEECCCccC----CCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999997532 36999999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 439 VNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 439 ~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
+|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|++
T Consensus 409 aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~-~~~~~PfGG~k~SG~G--r~~g~~gl~~~~~~k~v~~ 482 (484)
T 3ifg_A 409 ANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLI-SNEVAPFGGVKQSGLG--REGSHYGIDDYVVIKYLCV 482 (484)
T ss_dssp HHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCC-CCSSSCBCCEETTEEC--CBSTTTTTGGGEEEEEEEE
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCcCCcCcCcCC--CCchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999998643 3578999999999999 5799999999999999875
No 4
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.7e-105 Score=863.51 Aligned_cols=477 Identities=28% Similarity=0.465 Sum_probs=449.6
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhc--hhccCCCHHHHHHHHHHHHHHHHhc
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF--PSWRNTPITTRQRVMLKLQELIRRD 116 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~ 116 (535)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| +.|+.++.++|.++|+++++.|+++
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 110 (520)
T 3ed6_A 31 LSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEH 110 (520)
T ss_dssp SCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHh
Confidence 34578999999987778899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 117 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
+++|++++++|+|||..+++.|+..+++.+++++...+...++..+....+...++.++|+|||++|+|||||+.+.+++
T Consensus 111 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 190 (520)
T 3ed6_A 111 REALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWK 190 (520)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999998877766555442224667889999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 191 ~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa 270 (520)
T 3ed6_A 191 IAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA 270 (520)
T ss_dssp HHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 5688999999999999999999999999999999
Q ss_pred cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCC
Q 009407 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADA 354 (535)
Q Consensus 276 ~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~ 354 (535)
.+++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++
T Consensus 271 ~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~ 350 (520)
T 3ed6_A 271 NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADT 350 (520)
T ss_dssp TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTC
T ss_pred hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCC
Confidence 999999999999999999999999999999999999999999999999988877 8999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHH
Q 009407 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434 (535)
Q Consensus 355 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~e 434 (535)
++||++++.+++++.++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 351 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 430 (520)
T 3ed6_A 351 EMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQE 430 (520)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred cccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHH
Confidence 99999999999999999999999999999999764221224699999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 435 ai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
||+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 431 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--re~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 431 AIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY-FAQAPWGGYKQSGIG--RELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEEE
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC-CCCCCcCCcCcCcCC--ccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999998654 578999999999999 579999999999999999
Q ss_pred eccC
Q 009407 515 QQWR 518 (535)
Q Consensus 515 ~~~~ 518 (535)
.++.
T Consensus 508 ~~~~ 511 (520)
T 3ed6_A 508 TNTN 511 (520)
T ss_dssp EESS
T ss_pred EcCC
Confidence 8764
No 5
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=3.8e-105 Score=858.05 Aligned_cols=472 Identities=27% Similarity=0.450 Sum_probs=446.8
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE 89 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45678999999988778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeee-ccCceEEeecCCCcchhhHhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLR-EPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
+|++++++|+|||..+++.|+..+++.+++++...+...++..+ ...+...++.+ +|+|||++|+|||||++++++++
T Consensus 90 ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 168 (506)
T 3rh9_A 90 EIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIP-EKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKL 168 (506)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECS-CCGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-cCCCceeeEeecccceEEEEECCCchHHHHHHHHH
Confidence 99999999999999999999999999999999888777665544 22456678888 99999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhc
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASA 276 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~ 276 (535)
++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .+++++|+.||+||+|+||||+.+|+.|++.+++
T Consensus 169 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~ 248 (506)
T 3rh9_A 169 SAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAE 248 (506)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTT
T ss_pred HHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999994 5788999999999999999999999999999999
Q ss_pred CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCC
Q 009407 277 KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADAD 355 (535)
Q Consensus 277 ~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~ 355 (535)
+++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|++++
T Consensus 249 ~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 328 (506)
T 3rh9_A 249 QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGID 328 (506)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCS
T ss_pred cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCc
Confidence 99999999999999999999999999999999999999999999999988888 89999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
+||++++.+++++.++|++++++|+++++||...+. ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 329 ~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~---~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 405 (506)
T 3rh9_A 329 IGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAEL---GDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEV 405 (506)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGC---CSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCC---CCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHH
Confidence 999999999999999999999999999999975321 26999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+| +++|++|+++||+.|+|+.
T Consensus 406 i~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~ft~~K~v~~ 482 (506)
T 3rh9_A 406 IDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGP-TPEAPFGGMKASGIG--REGGLEGLFEFVEAQTVPR 482 (506)
T ss_dssp HHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCC-CTTSCBCCSGGGEES--CBSHHHHHTTTEEEEEEEE
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCccCcCcCcCC--cCccHHHHHHhcceEEEEE
Confidence 9999999999999999999999999999999999999998654 468999999999999 6899999999999999987
Q ss_pred cc
Q 009407 516 QW 517 (535)
Q Consensus 516 ~~ 517 (535)
+.
T Consensus 483 ~~ 484 (506)
T 3rh9_A 483 GF 484 (506)
T ss_dssp C-
T ss_pred cC
Confidence 54
No 6
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=2.3e-105 Score=859.42 Aligned_cols=468 Identities=30% Similarity=0.493 Sum_probs=444.6
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 33 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 112 (504)
T 3ek1_A 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDI 112 (504)
T ss_dssp SSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 36799999998877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhh
Q 009407 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA 200 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 200 (535)
++++++|+|||..+++.|+..+++.+++++.+.+...+...+....+...++.++|+|||++|+|||||+++.++++++|
T Consensus 113 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~A 192 (504)
T 3ek1_A 113 ALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPA 192 (504)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999988876655544433345678899999999999999999999999999999
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCC
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~ 279 (535)
|++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .++++.|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 193 LaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk 272 (504)
T 3ek1_A 193 LAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIK 272 (504)
T ss_dssp HHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTC
T ss_pred HHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcC
Confidence 999999999999999999999999999999999999999984 5789999999999999999999999999999999999
Q ss_pred eEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCC
Q 009407 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGP 358 (535)
Q Consensus 280 ~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gp 358 (535)
|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++||
T Consensus 273 ~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp 352 (504)
T 3ek1_A 273 RISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGP 352 (504)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCC
T ss_pred CeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCcccc
Confidence 99999999999999999999999999999999999999999999988877 89999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHH
Q 009407 359 VISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKI 438 (535)
Q Consensus 359 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~ 438 (535)
++++.+++++.++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 353 li~~~~~~~v~~~i~~a~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 426 (504)
T 3ek1_A 353 MIEEKAITKVKAHIEDAVSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQ 426 (504)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHH
Confidence 999999999999999999999999999974 25899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 439 VNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 439 ~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
+|+++|||++||||+|.++++++++++++|+|+||++. ...+.+||||+|.||+| +++|++|+++||+.|+|+.++
T Consensus 427 aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~-~~~~~~PfGG~k~SG~G--r~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 427 ANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGL-ISNEVAPFGGVKQSGLG--REGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp HHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSC-CCCSSSCBCCSGGGEES--CBSTTTSGGGGEEEEEEEEEC
T ss_pred HhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCC-CCCCCCCcCCcCcCcCC--CCCcHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999999999999875 34578999999999999 579999999999999998764
No 7
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=6.7e-105 Score=856.52 Aligned_cols=477 Identities=30% Similarity=0.457 Sum_probs=446.9
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 11 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 90 (497)
T 3k2w_A 11 KNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKH 90 (497)
T ss_dssp CTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred cccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999988778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 198 (535)
+|++++++|+|||..+++.|+..+++.+++++...+...++..+....+...++.++|+|||++|+|||||+.+.+++++
T Consensus 91 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~ 170 (497)
T 3k2w_A 91 ILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIG 170 (497)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999887776655444233566788999999999999999999999999999
Q ss_pred hhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 199 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
+||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++++
T Consensus 171 ~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~ 250 (497)
T 3k2w_A 171 PALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEY 250 (497)
T ss_dssp HHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTT
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999999999999999 567899999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCc
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADL 356 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~ 356 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++
T Consensus 251 l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~ 330 (497)
T 3k2w_A 251 MTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQM 330 (497)
T ss_dssp TCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSB
T ss_pred CCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999988888 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH
Q 009407 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI 436 (535)
Q Consensus 357 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai 436 (535)
||++++.+++++.++|++++++|+++++||........+.|+|+.|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 331 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 410 (497)
T 3k2w_A 331 GPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAI 410 (497)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHH
T ss_pred ccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHH
Confidence 99999999999999999999999999999973111112368999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 437 KIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 437 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+| +++|++|+++||+.|+|+.+
T Consensus 411 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~ft~~k~v~~~ 487 (497)
T 3k2w_A 411 EFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGE-QHQGFHNGWKQSGFG--GEDGKFGLEQYLEKKTVYIN 487 (497)
T ss_dssp HHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC-CTTSCBCCEETSEES--CBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCCcCCcCCCcCC--ccchHHHHHHhcceEEEEEE
Confidence 999999999999999999999999999999999999998654 478999999999999 58999999999999999987
Q ss_pred cC
Q 009407 517 WR 518 (535)
Q Consensus 517 ~~ 518 (535)
+.
T Consensus 488 ~~ 489 (497)
T 3k2w_A 488 EA 489 (497)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 8
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=4.9e-105 Score=856.44 Aligned_cols=471 Identities=24% Similarity=0.415 Sum_probs=445.5
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
|...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++.
T Consensus 23 ~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 101 (498)
T 4f3x_A 23 MMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEA 101 (498)
T ss_dssp CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhH
Confidence 455678999999987666 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHh-hhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 118 DKLAMNITTEQGKTLKDA-QGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
++|++++++|+|||..++ +.|+..+++.++++++..+.+.++..+....+...++.++|+|||++|+|||||+.+.+++
T Consensus 102 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (498)
T 4f3x_A 102 DEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWK 181 (498)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHH
Confidence 999999999999999999 8899999999999998877666554432234667889999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
+++||++||+||+|||+.+|.++..+++++.++ +|+|++|+|+| +.+++++|+.||+|++|+||||+.+|+.|++.++
T Consensus 182 ~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 260 (498)
T 4f3x_A 182 LAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAA 260 (498)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 99999999999 5578999999999999999999999999999999
Q ss_pred cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCC
Q 009407 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADA 354 (535)
Q Consensus 276 ~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~ 354 (535)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++
T Consensus 261 ~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~ 340 (498)
T 4f3x_A 261 KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTEN 340 (498)
T ss_dssp TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGC
T ss_pred hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccC
Confidence 999999999999999999999999999999999999999999999999988888 8999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCC-EEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 355 DLGPVISKQAKERICRLIQSGIESGA-RLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 355 ~~Gpli~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
++||++++.+++++.++|++++++|+ ++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 341 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 416 (498)
T 4f3x_A 341 EIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGS----DEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKD 416 (498)
T ss_dssp SSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCC----SSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTS
T ss_pred ccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCC----CCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHH
Confidence 99999999999999999999999999 9999997532 479999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++.... +.+||||+|.||+| +++|++|+++||+.|+|
T Consensus 417 eAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~-~~~PfGG~k~SG~G--r~~G~~~l~~~t~~k~v 493 (498)
T 4f3x_A 417 DAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLT-NEMPHGGIKQSGYG--KDMSVYALEDYTAVRHI 493 (498)
T ss_dssp CHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC-TTSCBCCSGGGEEC--CBSHHHHHHHTEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCC-CCCCcCCcCcCCcC--ccchHHHHHHhhceEEE
Confidence 9999999999999999999999999999999999999999986543 78999999999999 57999999999999999
Q ss_pred Eecc
Q 009407 514 TQQW 517 (535)
Q Consensus 514 ~~~~ 517 (535)
++++
T Consensus 494 ~~~~ 497 (498)
T 4f3x_A 494 MINH 497 (498)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 8754
No 9
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=2.6e-104 Score=853.73 Aligned_cols=469 Identities=28% Similarity=0.469 Sum_probs=441.5
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch--hccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++++
T Consensus 38 ~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 117 (517)
T 2o2p_A 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEE 117 (517)
T ss_dssp SEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999875567899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCC---CCCceeeeeeccCceEEeecCCCcchhhHhh
Q 009407 120 LAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNV---SNGIDTYSLREPLGVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 195 (535)
|++++++|+|||..+++ .|+..+++.++++++..+...++..+.. ..+...++.++|+|||++|+|||||+.++++
T Consensus 118 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 197 (517)
T 2o2p_A 118 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 197 (517)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHH
Confidence 99999999999999998 8999999999999988777665544421 2233578899999999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ .+++++|+.||+|++|+||||+.+|+.|++.+
T Consensus 198 ~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~a 277 (517)
T 2o2p_A 198 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999994 57889999999999999999999999999999
Q ss_pred h-cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCC
Q 009407 275 S-AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEA 352 (535)
Q Consensus 275 ~-~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~ 352 (535)
+ +++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|+|+
T Consensus 278 a~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~ 357 (517)
T 2o2p_A 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLER 357 (517)
T ss_dssp HHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTST
T ss_pred HHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 9 899999999999999999999999999999999999999999999999988877 89999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCC-
Q 009407 353 DADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADS- 431 (535)
Q Consensus 353 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~- 431 (535)
++++|||+++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 358 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 433 (517)
T 2o2p_A 358 DTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP----RPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433 (517)
T ss_dssp TCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCS----SSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTT
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCC----CCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCC
Confidence 99999999999999999999999999999999997532 3689999999999999999999999999999999999
Q ss_pred -HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhe
Q 009407 432 -LEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510 (535)
Q Consensus 432 -~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~ 510 (535)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.
T Consensus 434 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G--r~~G~~~l~~~~~~ 510 (517)
T 2o2p_A 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNK-TDVAAPFGGFKQSGFG--KDLGEAALNEYLRI 510 (517)
T ss_dssp CSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSC-CCTTSCBCCCGGGEEC--CBSHHHHHHTTEEE
T ss_pred CHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCC-CCCCCCcCCcCcCCcC--ccChHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999998753 3478999999999999 57999999999999
Q ss_pred eEEEecc
Q 009407 511 KTVTQQW 517 (535)
Q Consensus 511 k~v~~~~ 517 (535)
|+|+.+|
T Consensus 511 k~v~~~~ 517 (517)
T 2o2p_A 511 KTVTFEY 517 (517)
T ss_dssp EEEEEEC
T ss_pred eEEEeeC
Confidence 9998754
No 10
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.3e-104 Score=853.33 Aligned_cols=474 Identities=32% Similarity=0.496 Sum_probs=448.6
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhc--hhccCCCHHHHHHHHHHHHHHHHh
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAF--PSWRNTPITTRQRVMLKLQELIRR 115 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~ 115 (535)
..+++||||+|+.+.++++++++||+| |+++++++.++.+|+++++++|++|| +.|+.++.++|.++|+++++.|++
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILA 100 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHH
Confidence 356799999999887788999999999 99999999999999999999999999 889999999999999999999999
Q ss_pred cHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhh
Q 009407 116 DIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 116 ~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 195 (535)
++++|++++++|+|||..+++.|+..+++.++++++..+...++..+....+...++.++|+|||++|+|||||+.+.++
T Consensus 101 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 101 RQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 99999999999999999999889999999999999888776655544222466788999999999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.+++++|+.||+||+|+||||+.+|+.|++.+
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 260 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 668899999999999999999999999999999
Q ss_pred hcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 275 SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 275 ~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
+++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|++
T Consensus 261 a~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 340 (528)
T 3u4j_A 261 ARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNER 340 (528)
T ss_dssp HTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTT
T ss_pred HhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999988888 899999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+++||++++.+++++.++|++++++|+++++||..... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 341 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~---~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 417 (528)
T 3u4j_A 341 TKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGR---EAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTAD 417 (528)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECT---TTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC---CCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHH
Confidence 99999999999999999999999999999999976421 169999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++||+.|+|
T Consensus 418 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v 494 (528)
T 3u4j_A 418 EAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDG-TPELPIGGYKKSGLG--RELGRYGFDEYSQFKGV 494 (528)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-CTTSCBCCSGGGEES--CBSTTHHHHHTEEEEEE
T ss_pred HHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCC-CCCCCcCCcCcCCCC--cCchHHHHHHhhceEEE
Confidence 999999999999999999999999999999999999999998643 578999999999999 57899999999999999
Q ss_pred EeccC
Q 009407 514 TQQWR 518 (535)
Q Consensus 514 ~~~~~ 518 (535)
+.++.
T Consensus 495 ~~~~~ 499 (528)
T 3u4j_A 495 HVTLG 499 (528)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 88753
No 11
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.1e-103 Score=848.43 Aligned_cols=476 Identities=30% Similarity=0.459 Sum_probs=446.5
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch-----hccCCCHHHHHHHHHHHHHH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP-----SWRNTPITTRQRVMLKLQEL 112 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~ 112 (535)
++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 3456789999999887788999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccc-c--CCCCCceeeeeeccCceEEeecCCCcc
Q 009407 113 IRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYV-P--NVSNGIDTYSLREPLGVCAGICPFNFP 189 (535)
Q Consensus 113 l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~~I~p~N~P 189 (535)
|++++++|++++++|+|||..+++.|+..+++.+++++...+.+.++.. + ....+...++.++|+|||++|+|||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP 164 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchH
Confidence 9999999999999999999999999999999999999988766544321 1 112456788999999999999999999
Q ss_pred hhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHH
Q 009407 190 AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGM 268 (535)
Q Consensus 190 ~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~ 268 (535)
+++.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .+.++.|+.||+||+|+||||+.+|+
T Consensus 165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~ 244 (503)
T 3iwj_A 165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGS 244 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHH
Confidence 99999999999999999999999999999999999999999999999999995 57889999999999999999999999
Q ss_pred HHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhccccc
Q 009407 269 HIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVN 347 (535)
Q Consensus 269 ~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG 347 (535)
.|++.++.+++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|
T Consensus 245 ~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 324 (503)
T 3iwj_A 245 KIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKIS 324 (503)
T ss_dssp HHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBS
T ss_pred HHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCC
Confidence 9999999999999999999999999999999999999999999999999999999988888 899999999999999999
Q ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEe
Q 009407 348 AGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCM 427 (535)
Q Consensus 348 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~ 427 (535)
+|+|+++++||++++.+++++.++|++++++|+++++||...+ ....|+|++|||+.+++++|++++||+||||++|+
T Consensus 325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~--~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 402 (503)
T 3iwj_A 325 DPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPE--HLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402 (503)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCT--TCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCc--cCCCCceeCCeeeecCCCCchhhCceeeCceEEEE
Confidence 9999999999999999999999999999999999999997532 12469999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhc
Q 009407 428 QADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFY 507 (535)
Q Consensus 428 ~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~ 507 (535)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+|+++|
T Consensus 403 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~g~~~f 479 (503)
T 3iwj_A 403 TFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQP-CFTQAPWGGVKRSGFG--RELGEWGLDNY 479 (503)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCC-CCTTSCBCCSGGGEEC--CBSHHHHHHTT
T ss_pred EeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCcCCcCcccCC--CcchHHHHHHh
Confidence 99999999999999999999999999999999999999999999998753 3578999999999999 57999999999
Q ss_pred hheeEEEeccC
Q 009407 508 TQIKTVTQQWR 518 (535)
Q Consensus 508 t~~k~v~~~~~ 518 (535)
|+.|+|+.++.
T Consensus 480 ~~~k~v~~~~~ 490 (503)
T 3iwj_A 480 LSVKQVTQYIS 490 (503)
T ss_dssp EEEEEEEEECC
T ss_pred hCeEEEEEeCC
Confidence 99999988754
No 12
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=7e-104 Score=849.13 Aligned_cols=478 Identities=31% Similarity=0.502 Sum_probs=446.1
Q ss_pred CCCCCceecCeeeeCCCCCe-EEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhc
Q 009407 38 PPRVPNLIGGAFIESRSSEY-IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~-~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 116 (535)
+..+++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++
T Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 96 (503)
T 1a4s_A 17 VTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRER 96 (503)
T ss_dssp CCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHH
Confidence 34567899999998766678 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 117 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
+++|++++++|+|||..+++.|+..+++.++++++..+...++..+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 97 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 175 (503)
T 1a4s_A 97 RDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWK 175 (503)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHH
Confidence 999999999999999999999999999999999988776655444322 3446788999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhc
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASA 276 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~ 276 (535)
+++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|++++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 176 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~ 255 (503)
T 1a4s_A 176 CAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAK 255 (503)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999944888999999999999999999999999999999
Q ss_pred CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCC
Q 009407 277 KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADAD 355 (535)
Q Consensus 277 ~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~ 355 (535)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|++++
T Consensus 256 ~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 335 (503)
T 1a4s_A 256 TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETR 335 (503)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCC
T ss_pred cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCc
Confidence 99999999999999999999999999999999999999999999999988888 89999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCC--CCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY--EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~--~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+||++++.+++++.++|++++++|+++++||+....... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 336 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 415 (503)
T 1a4s_A 336 MGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEE 415 (503)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHH
Confidence 999999999999999999999999999999975310100 258999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|
T Consensus 416 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~f~~~k~v 492 (503)
T 1a4s_A 416 EVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI-SPVEVPFGGYKMSGFG--RENGQATVDYYSQLKTV 492 (503)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC-CCTTSCBCCSGGGEEC--CBSTTGGGGGSEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCC-CCCCCCCCCcCCCCCC--ccchHHHHHHhcCceEE
Confidence 99999999999999999999999999999999999999998764 3578999999999999 67999999999999999
Q ss_pred EeccCC
Q 009407 514 TQQWRD 519 (535)
Q Consensus 514 ~~~~~~ 519 (535)
+.++.+
T Consensus 493 ~~~~~~ 498 (503)
T 1a4s_A 493 IVEMGD 498 (503)
T ss_dssp EECCSC
T ss_pred EEccCC
Confidence 887644
No 13
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=6e-104 Score=847.58 Aligned_cols=478 Identities=44% Similarity=0.778 Sum_probs=447.3
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
+..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 3 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 3 IRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp CCBCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred CcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 34567899999998766788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
++|++++++|+|||..+++.|+..+++.+++++.+.++..++..+....+...+++++|+|||++|+|||||+.++++++
T Consensus 83 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 162 (486)
T 1t90_A 83 EELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMF 162 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHH
Confidence 99999999999999999999999999999999887777766544322235567889999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.+.++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 163 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~ 242 (486)
T 1t90_A 163 PMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSEN 242 (486)
T ss_dssp HHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcce-EEEeCChhHHHHHHHHHHhcccccCCCCCCCCc
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALST-VVFVGDSKSWEDKLVERAKALKVNAGTEADADL 356 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~-vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~ 356 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++| ||+++++|+|+++|+++++++++|+|.++++++
T Consensus 243 ~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~~d~f~~~l~~~~~~~~vG~~~~~~~~~ 322 (486)
T 1t90_A 243 LKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFL 322 (486)
T ss_dssp TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCB
T ss_pred CCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCCHHHHHHHHHHHHHhcccCCCCccCCcc
Confidence 9999999999999999999999999999999999999999999999 765555899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH
Q 009407 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI 436 (535)
Q Consensus 357 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai 436 (535)
||++++.+++++.++|++++++|+++++||.... .+.|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 323 gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~---~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai 399 (486)
T 1t90_A 323 GPVIREDNKKRTLSYIEKGLEEGARLVCDGRENV---SDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAI 399 (486)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSC---CSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC---CCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHH
Confidence 9999999999999999999999999999996421 1368999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 437 KIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 437 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+++|+++|||++||||+|.++++++++++++|+|+||++.....+.+||||+|.||+|..+++|++|+++||+.|+|+.+
T Consensus 400 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~ 479 (486)
T 1t90_A 400 EIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479 (486)
T ss_dssp HHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEE
T ss_pred HHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999998755445789999999999996568999999999999999887
Q ss_pred cC
Q 009407 517 WR 518 (535)
Q Consensus 517 ~~ 518 (535)
+.
T Consensus 480 ~~ 481 (486)
T 1t90_A 480 YP 481 (486)
T ss_dssp CC
T ss_pred cC
Confidence 63
No 14
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=4.6e-104 Score=850.22 Aligned_cols=466 Identities=30% Similarity=0.448 Sum_probs=440.8
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 12 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 91 (505)
T 3prl_A 12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEII 91 (505)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998877789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCC-C----CceeeeeeccCceEEeecCCCcchhhHhh
Q 009407 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVS-N----GIDTYSLREPLGVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 195 (535)
++++++|+|||..+++.|+..+++.++++++......++..+... . +...++.++|+|||++|+|||||+++.++
T Consensus 92 a~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 171 (505)
T 3prl_A 92 GELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAA 171 (505)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHH
Confidence 999999999999999999999999999999887766554433211 2 45678899999999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 172 ~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 251 (505)
T 3prl_A 172 KIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA 251 (505)
T ss_dssp HHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999 467899999999999999999999999999998
Q ss_pred hcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 275 SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 275 ~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
+ ++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|. ++
T Consensus 252 a--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~-~~ 328 (505)
T 3prl_A 252 K--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPE-DD 328 (505)
T ss_dssp C--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT-TT
T ss_pred c--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCC-Cc
Confidence 7 8999999999999999999999999999999999999999999999988877 899999999999999999999 99
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 329 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~-------~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~d 401 (505)
T 3prl_A 329 ADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR-------QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDAN 401 (505)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHH
T ss_pred CcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC-------CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHH
Confidence 99999999999999999999999999999999962 58999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||++||||+|.++++++++++++|+|+||+++....+.+||||+|.||+| +++|++|+++||+.|+|
T Consensus 402 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~G--r~~g~~~~~~f~~~k~v 479 (505)
T 3prl_A 402 EAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLG--VQGIKPSLLSMTRERVT 479 (505)
T ss_dssp HHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEES--CBSHHHHHHHTEEEEEE
T ss_pred HHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCC--cCccHHHHHHhhceEEE
Confidence 9999999999999999999999999999999999999999986545678999999999999 68999999999999999
Q ss_pred EeccC
Q 009407 514 TQQWR 518 (535)
Q Consensus 514 ~~~~~ 518 (535)
++++.
T Consensus 480 ~~~~~ 484 (505)
T 3prl_A 480 VLNLA 484 (505)
T ss_dssp EEEC-
T ss_pred EEeCC
Confidence 88764
No 15
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2.6e-104 Score=853.72 Aligned_cols=471 Identities=29% Similarity=0.485 Sum_probs=444.8
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 92 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERND 92 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999988778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHH----hcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHh
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATL----QMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPL 194 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 194 (535)
+|++++++|+|||..++ |+..+++.+++++...+. +.++..+ ...+. .++.++|+|||++|+|||||+++++
T Consensus 93 ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~-~~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~ 168 (517)
T 3r31_A 93 ALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIP-LGGDF-AYTKRVPLGVCVGIGAWNYPQQIAC 168 (517)
T ss_dssp HHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEE-CSSSE-EEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCcccc-cCCCc-ceEEEcCccEEEEECCCcchHHHHH
Confidence 99999999999999999 999999999999988776 6666554 23455 8899999999999999999999999
Q ss_pred hhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 195 WMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 195 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
+++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 169 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 248 (517)
T 3r31_A 169 WKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAA 248 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999878999999999999999999999999999999
Q ss_pred hcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 275 SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 275 ~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
+++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|++
T Consensus 249 a~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 328 (517)
T 3r31_A 249 AGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYA 328 (517)
T ss_dssp HHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999988888 899999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+++||++++.+++++.++|++++++|+++++|| .........|+|+.|||+.+++++|++++||+||||++|++|+|+|
T Consensus 329 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 407 (517)
T 3r31_A 329 THLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDED 407 (517)
T ss_dssp CSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHH
T ss_pred CcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHH
Confidence 999999999999999999999999999999999 3111112469999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|
T Consensus 408 eAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v 484 (517)
T 3r31_A 408 EVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNL-CPVEIPFGGSKQSGFG--RENSAAALEHYSELKTV 484 (517)
T ss_dssp HHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCC-CCTTSCBCCEETTEEC--CBSTGGGGGGSEEEEEE
T ss_pred HHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCC-CCCCCCcCCcCcCCCC--cCchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999754 3578999999999999 57999999999999999
Q ss_pred Eecc
Q 009407 514 TQQW 517 (535)
Q Consensus 514 ~~~~ 517 (535)
+.++
T Consensus 485 ~~~~ 488 (517)
T 3r31_A 485 YVST 488 (517)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8765
No 16
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=2e-103 Score=842.98 Aligned_cols=469 Identities=30% Similarity=0.482 Sum_probs=444.9
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 10 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 89 (481)
T 3jz4_A 10 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDL 89 (481)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35799999998877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhh
Q 009407 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA 200 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 200 (535)
++++++|+|||..+++.|+..+++.+++++.......+...+....+...+++++|+|||++|+|||||+++.++++++|
T Consensus 90 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 169 (481)
T 3jz4_A 90 ARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPA 169 (481)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999988766555544433346678899999999999999999999999999999
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCC
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~ 279 (535)
|++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.++++++
T Consensus 170 LaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~ 249 (481)
T 3jz4_A 170 LAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIK 249 (481)
T ss_dssp HHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTC
T ss_pred HHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999 56889999999999999999999999999999999999
Q ss_pred eEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCC
Q 009407 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGP 358 (535)
Q Consensus 280 ~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gp 358 (535)
|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++||
T Consensus 250 ~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gp 329 (481)
T 3jz4_A 250 KVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGP 329 (481)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCC
T ss_pred ceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCcccc
Confidence 99999999999999999999999999999999999999999999988888 89999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHH
Q 009407 359 VISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKI 438 (535)
Q Consensus 359 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~ 438 (535)
++++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 330 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 405 (481)
T 3jz4_A 330 LIDEKAVAKVEEHIADALEKGARVVCGGKAHE----RGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQ 405 (481)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCEEEECCSBCT----TCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHH
Confidence 99999999999999999999999999997532 35899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 439 VNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 439 ~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|++.
T Consensus 406 aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 406 ANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII-SNEVAPFGGIKASGLG--REGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCC-CCSSSCBCCSGGGEES--CBSHHHHHHTTEEEEEEEEE
T ss_pred HhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCC-CCCCCCcCCcccCcCC--CCchHHHHHHhhceeEEEEe
Confidence 999999999999999999999999999999999999764 3578999999999999 68999999999999999864
No 17
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-103 Score=845.39 Aligned_cols=473 Identities=30% Similarity=0.436 Sum_probs=445.0
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch--hccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++
T Consensus 10 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 89 (495)
T 3b4w_A 10 KLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDL 89 (495)
T ss_dssp SEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999876678899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhh
Q 009407 120 LAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 198 (535)
|++++++|+|||..+++ .|+..+++.++++++..+.+.++..+ ...+...++.++|+|||++|+|||||+++++++++
T Consensus 90 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 168 (495)
T 3b4w_A 90 FTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETR-TGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIA 168 (495)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEE-EETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-CCCCceEEEEEccCceEEEECCCcchHHHHHHHHH
Confidence 99999999999999998 89999999999999887776665443 22344678899999999999999999999999999
Q ss_pred hhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCC
Q 009407 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278 (535)
Q Consensus 199 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~ 278 (535)
+||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.+.+++|+.||+||+|+||||+.+|+.|++.+++++
T Consensus 169 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l 248 (495)
T 3b4w_A 169 PALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEML 248 (495)
T ss_dssp HHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999997788999999999999999999999999999999999
Q ss_pred CeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcC
Q 009407 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLG 357 (535)
Q Consensus 279 ~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~G 357 (535)
+|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++|
T Consensus 249 ~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 328 (495)
T 3b4w_A 249 KPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIG 328 (495)
T ss_dssp CCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBC
T ss_pred CceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccC
Confidence 999999999999999999999999999999999999999999999988888 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHH
Q 009407 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIK 437 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~ 437 (535)
|++++.+++++.++|++++++|+++++||+.... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 329 pli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 406 (495)
T 3b4w_A 329 PLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEG--LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIA 406 (495)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHhCCCEEEecCccccc--ccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHH
Confidence 9999999999999999999999999999975321 12589999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 438 IVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 438 ~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
++|+++|||++||||+|.++++++++++++|+|+||++. ..+.+||||+|.||+| +++|++|+++||+.|+|+.++
T Consensus 407 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~--~~~~~PfGG~k~SG~G--r~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 407 IANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA--FDPGSPFGGYKNSGIG--RENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp HHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC--CCTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEEECCT
T ss_pred HHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC--CCCCCCCCCCCCCCcC--ccchHHHHHHhcceeEEEEcc
Confidence 999999999999999999999999999999999999875 4578999999999999 589999999999999998876
Q ss_pred CCCC
Q 009407 518 RDLP 521 (535)
Q Consensus 518 ~~~~ 521 (535)
.+..
T Consensus 483 ~~~~ 486 (495)
T 3b4w_A 483 GYTV 486 (495)
T ss_dssp TCCC
T ss_pred Cccc
Confidence 4433
No 18
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=3.6e-103 Score=842.49 Aligned_cols=469 Identities=35% Similarity=0.506 Sum_probs=442.2
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch---hccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP---SWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 4679999999876678899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
++|++++++|+|||..++. .|+..+++.++++++..+...++..+ ...+...++.++|+|||++|+|||||+++.+++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIP-MDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEEC-CSSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeee-ccCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence 9999999999999999874 69999999999999887766655444 234556788999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
+++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.+.++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 259 (501)
T 1bxs_A 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 259 (501)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 6678999999999999999999999999999999
Q ss_pred -cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 276 -AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 276 -~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|++
T Consensus 260 ~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 260 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp HTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred hccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 999999999999999999999999999999999999999999999999988887 899999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+++||++++.+++++.++|++++++|+++++||+..+ ..|+|++|||+.++++||++++||+||||++|++|+|+|
T Consensus 340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 415 (501)
T 1bxs_A 340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG----NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLD 415 (501)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEEC----SSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCC----CCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHH
Confidence 9999999999999999999999999999999987532 358999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++|++.|+|
T Consensus 416 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~pfGG~k~SG~G--~~~G~~~l~~f~~~K~v 492 (501)
T 1bxs_A 416 DVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV-SAQCPFGGFKMSGNG--RELGEYGFHEYTEVKTV 492 (501)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEE
T ss_pred HHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCC-CCCCCCCCcCcCCcC--ccchHHHHHHhhCeeEE
Confidence 999999999999999999999999999999999999999987543 478999999999999 57999999999999999
Q ss_pred Eecc
Q 009407 514 TQQW 517 (535)
Q Consensus 514 ~~~~ 517 (535)
+.++
T Consensus 493 ~~~~ 496 (501)
T 1bxs_A 493 TIKI 496 (501)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 8865
No 19
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=2.7e-103 Score=841.66 Aligned_cols=471 Identities=30% Similarity=0.451 Sum_probs=443.3
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (479)
T 2imp_A 5 VQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERAS 84 (479)
T ss_dssp EECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999987667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 198 (535)
+|++++++|+|||..+++.|+..+++.++++++..+...++..+....+...++.++|+|||++|+|||||+.+++++++
T Consensus 85 ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 164 (479)
T 2imp_A 85 EISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMA 164 (479)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHH
Confidence 99999999999999999999999999999999877665555433222345678999999999999999999999999999
Q ss_pred hhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 199 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
+||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|+ .++++.|+.||+||+|+||||+.+|+.|++.++++
T Consensus 165 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~ 244 (479)
T 2imp_A 165 PALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKN 244 (479)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999995 46899999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCC-CCCC
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTE-ADAD 355 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~-~~~~ 355 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.| ++++
T Consensus 245 ~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 324 (479)
T 2imp_A 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIA 324 (479)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCS
T ss_pred CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCc
Confidence 9999999999999999999999999999999999999999999999988888 8999999999999999999999 9999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
+|||+++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 325 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eA 400 (479)
T 2imp_A 325 MGPLINAAALERVEQKVARAVEEGARVAFGGKAVE----GKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDA 400 (479)
T ss_dssp BCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCC----SSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccC----CCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHH
Confidence 99999999999999999999999999999997522 25899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++||+.|+|+.
T Consensus 401 i~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~v~~ 477 (479)
T 2imp_A 401 ISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE-AMQGFHAGWRKSGIG--GADGKHGLHEYLQTQVVYL 477 (479)
T ss_dssp HHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC-CTTSCBCCEETTEES--CBSHHHHHHTTEEEEEEEE
T ss_pred HHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC-CCCCCCCCCCCCCCC--CCchHHHHHHhcCeeEEEe
Confidence 9999999999999999999999999999999999999997644 578999999999999 6899999999999999876
Q ss_pred c
Q 009407 516 Q 516 (535)
Q Consensus 516 ~ 516 (535)
+
T Consensus 478 ~ 478 (479)
T 2imp_A 478 Q 478 (479)
T ss_dssp E
T ss_pred c
Confidence 3
No 20
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=3.7e-103 Score=841.61 Aligned_cols=467 Identities=28% Similarity=0.408 Sum_probs=435.8
Q ss_pred CCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 40 ~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++.++
T Consensus 25 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 104 (497)
T 3i44_A 25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSD 104 (497)
T ss_dssp ECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeee-eccCceEEeecCCCcchhhHhhhh
Q 009407 120 LAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSL-REPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
|+++++.|+|||..+++ .|+..+++.+++++............ ..+...++. ++|+|||++|+|||||+++.++++
T Consensus 105 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 182 (497)
T 3i44_A 105 MAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL--IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKV 182 (497)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES--STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--cCCceeEEEeecCceEEEEECCCcchHHHHHHHH
Confidence 99999999999999999 89999999999988765543222111 124446777 999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhc
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASA 276 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~ 276 (535)
++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 183 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~ 262 (497)
T 3i44_A 183 IPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASN 262 (497)
T ss_dssp HHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999 55889999999999999999999999999999999
Q ss_pred CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCC
Q 009407 277 KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADAD 355 (535)
Q Consensus 277 ~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~ 355 (535)
++||+++|||||||+||++||| |.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|++++
T Consensus 263 ~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~ 341 (497)
T 3i44_A 263 TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNH 341 (497)
T ss_dssp TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSC
T ss_pred cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCc
Confidence 9999999999999999999999 999999999999999999999999988888 89999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
+||++++.+++++.++|++++++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 342 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~-~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 420 (497)
T 3i44_A 342 IGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLP-MGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEA 420 (497)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCC-CcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHH
Confidence 99999999999999999999999999999994221 11236999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
|+++|+++|||++||||+|.++++++++++++|+|+||. ....+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 421 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~--~~~~~~~PfGG~k~SG~G--r~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 421 VTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG--HELPGGSYFGGVKFSGRA--REGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT--CCCCTTCCBCCSGGGCCC--CBSHHHHHHTTEEEEEES
T ss_pred HHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC--CCCCCCCCcCCcCcCcCC--ccchHHHHHHhcceeEEE
Confidence 999999999999999999999999999999999999994 234578999999999999 679999999999999875
No 21
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=6e-103 Score=844.19 Aligned_cols=472 Identities=31% Similarity=0.481 Sum_probs=443.2
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 28 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 107 (515)
T 2d4e_A 28 LHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELA 107 (515)
T ss_dssp CEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999987667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
+++++|+|||..+++.|+..+++.++++++..+...++.++....+...++.++|+|||++|+|||||+.+.++++++||
T Consensus 108 ~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 187 (515)
T 2d4e_A 108 VMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPAL 187 (515)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHH
Confidence 99999999999999999999999999999887776665444223455678899999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCe
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~ 280 (535)
++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .++++.|+.||+||+|+||||+.+|+.|++.++++++|
T Consensus 188 aaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~ 267 (515)
T 2d4e_A 188 AFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKR 267 (515)
T ss_dssp HTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCE
T ss_pred HcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999994 57899999999999999999999999999999999999
Q ss_pred EEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCC
Q 009407 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPV 359 (535)
Q Consensus 281 v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpl 359 (535)
+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++||+
T Consensus 268 v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpl 347 (515)
T 2d4e_A 268 LSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPL 347 (515)
T ss_dssp EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCC
T ss_pred eEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCC
Confidence 9999999999999999999999999999999999999999999988877 899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEeccccccC----CCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 360 ISKQAKERICRLIQSGIESGARLLLDGRNIVV----PGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 360 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~----~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
+++.+++++.++|++++++|+++++||..... .....|+|++|||+.+ +++|++++||+||||++|++|+|+|||
T Consensus 348 i~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deA 426 (515)
T 2d4e_A 348 IHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEA 426 (515)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHH
Confidence 99999999999999999999999999975310 0112589999999999 999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++|++.|+|+.
T Consensus 427 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~~~~~K~v~~ 503 (515)
T 2d4e_A 427 LRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNV-RHLPTPFGGVKGSGDR--REGGTYALDFYTDLKTIAL 503 (515)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCC-CCTTSCBCCSGGGBCS--CBSHHHHHHHHEEEEEEEE
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC-CCCCCCCCCcCCCCCC--ccchHHHHHHhCceeEEEE
Confidence 999999999999999999999999999999999999998754 4578999999999999 5799999999999999988
Q ss_pred cc
Q 009407 516 QW 517 (535)
Q Consensus 516 ~~ 517 (535)
++
T Consensus 504 ~~ 505 (515)
T 2d4e_A 504 PL 505 (515)
T ss_dssp ES
T ss_pred cC
Confidence 76
No 22
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=3.2e-103 Score=841.75 Aligned_cols=472 Identities=28% Similarity=0.434 Sum_probs=440.7
Q ss_pred cCCCCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHH
Q 009407 35 QHNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIR 114 (535)
Q Consensus 35 ~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~ 114 (535)
.......++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+
T Consensus 18 ~~~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~ 96 (495)
T 1wnd_A 18 KAGLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIE 96 (495)
T ss_dssp ----CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred cccccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHH
Confidence 34444567899999998655 78999999999999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhH
Q 009407 115 RDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIP 193 (535)
Q Consensus 115 ~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 193 (535)
+++++|++++++|+|||..+++. |+..+++.++++++..+...++..+....+...++.++|+|||++|+|||||+++.
T Consensus 97 ~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 176 (495)
T 1wnd_A 97 ENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMA 176 (495)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHH
Confidence 99999999999999999999988 99999999999998776665554432213446788999999999999999999999
Q ss_pred hhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHH
Q 009407 194 LWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYA 272 (535)
Q Consensus 194 ~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 272 (535)
++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+|+| +.+++++|+.||+||+|+||||+.+|+.|++
T Consensus 177 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 255 (495)
T 1wnd_A 177 AWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS 255 (495)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999999 99999999999 5678999999999999999999999999999
Q ss_pred HHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCC
Q 009407 273 RASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTE 351 (535)
Q Consensus 273 ~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~ 351 (535)
.++++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|
T Consensus 256 ~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 335 (495)
T 1wnd_A 256 HTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDD 335 (495)
T ss_dssp HHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTS
T ss_pred HHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCcc
Confidence 999999999999999999999999999999999999999999999999999988888 8999999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcC-CEEEeccc-cccCCCCCCCceeccEEEecCCCCcccccccccccceEEeec
Q 009407 352 ADADLGPVISKQAKERICRLIQSGIESG-ARLLLDGR-NIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQA 429 (535)
Q Consensus 352 ~~~~~Gpli~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~ 429 (535)
+++++|||+++.+++++.++|++++++| +++++||. .. +.|+|++|||+.+++++|++++||+||||++|++|
T Consensus 336 ~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 410 (495)
T 1wnd_A 336 ESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-----GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPF 410 (495)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-----SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-----CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEe
Confidence 9999999999999999999999999999 99999986 42 25899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchh
Q 009407 430 DSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQ 509 (535)
Q Consensus 430 ~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~ 509 (535)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+
T Consensus 411 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~f~~ 487 (495)
T 1wnd_A 411 DNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFM-LVSEMPHGGQKLSGYG--KDMSLYGLEDYTV 487 (495)
T ss_dssp CCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCC-CCTTSCBCCSGGGEEC--CBSHHHHHHTTEE
T ss_pred CCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCCCcCcCC--ccchHHHHHHhhC
Confidence 999999999999999999999999999999999999999999998754 3478999999999999 5799999999999
Q ss_pred eeEEEec
Q 009407 510 IKTVTQQ 516 (535)
Q Consensus 510 ~k~v~~~ 516 (535)
.|+|+.+
T Consensus 488 ~k~v~~~ 494 (495)
T 1wnd_A 488 VRHVMVK 494 (495)
T ss_dssp EEEEEEE
T ss_pred eEEEEec
Confidence 9999764
No 23
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=4.2e-103 Score=848.12 Aligned_cols=471 Identities=30% Similarity=0.462 Sum_probs=444.7
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
..+++||||+|+. ++++++++||+| |+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (538)
T 3qan_A 36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRK 113 (538)
T ss_dssp EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHH
Confidence 3457899999997 568999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhh-HHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGM-ATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
++|++++++|+|||..+++.|+..+++.+++++.. .++..++..+ ...+...++.++|+|||++|+|||||+++.+++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 192 (538)
T 3qan_A 114 HEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEIL-SRPGEQNRYFYTPMGVTVTISPWNFALAIMVGT 192 (538)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCC-CCTTEEEEEEEEECCEEEEECCSTTTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeec-ccCCcceeeecCCCcEEEEECCCchHHHHHHHH
Confidence 99999999999999999999999999999999988 6777776655 234677889999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
+++||++||+||+|||+.+|.++..|++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 193 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 272 (538)
T 3qan_A 193 AVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAA 272 (538)
T ss_dssp HHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 5678999999999999999999999999999999
Q ss_pred cC------CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccC
Q 009407 276 AK------GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNA 348 (535)
Q Consensus 276 ~~------~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~ 348 (535)
.+ ++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+
T Consensus 273 ~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 352 (538)
T 3qan_A 273 VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGD 352 (538)
T ss_dssp SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSC
T ss_pred hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCC
Confidence 88 9999999999999999999999999999999999999999999999988888 8999999999999999999
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEee
Q 009407 349 GTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQ 428 (535)
Q Consensus 349 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~ 428 (535)
|.|+++++||++++.+++++.++|++++++| ++++||.... ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 353 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 427 (538)
T 3qan_A 353 PTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDS----STGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSK 427 (538)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEEC----SSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCC----CCCceeCCeeeecCCCCChhhCCCcCCcEEEEEE
Confidence 9999999999999999999999999999999 9999997632 2699999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEc-CCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhc
Q 009407 429 ADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN-VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFY 507 (535)
Q Consensus 429 ~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN-~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~ 507 (535)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|| .++....+.+||||+|.||+|. +++|++|+++|
T Consensus 428 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~G~~gl~~f 506 (538)
T 3qan_A 428 ANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDS-KAGGPDYLALH 506 (538)
T ss_dssp ESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCC-CBTSTTTGGGG
T ss_pred eCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCc-ccccHHHHHHh
Confidence 999999999999999999999999999999999999999999999 4544446889999999999993 47899999999
Q ss_pred hheeEEEeccC
Q 009407 508 TQIKTVTQQWR 518 (535)
Q Consensus 508 t~~k~v~~~~~ 518 (535)
|+.|+|+.++.
T Consensus 507 t~~k~v~~~~~ 517 (538)
T 3qan_A 507 MQAKTVSEMYA 517 (538)
T ss_dssp EEEEEEEEEC-
T ss_pred hCeEEEEEecC
Confidence 99999988763
No 24
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=3.5e-103 Score=842.46 Aligned_cols=468 Identities=32% Similarity=0.472 Sum_probs=441.2
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch---hccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP---SWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++++
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999876678899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
+|++++++|+|||..++. .|+..+++.++++++..+...++..+ ...+...++.++|+|||++|+|||||+++.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEEC-CSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCccee-cCCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 999999999999999874 69999999999999877666554444 2334567889999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh-
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS- 275 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~- 275 (535)
++||++||+||+|||+.+|.++..|++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999 6678999999999999999999999999999999
Q ss_pred cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCC
Q 009407 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADA 354 (535)
Q Consensus 276 ~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~ 354 (535)
++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++
T Consensus 260 ~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp TTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred hcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 999999999999999999999999999999999999999999999999988887 8999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHH
Q 009407 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434 (535)
Q Consensus 355 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~e 434 (535)
++||++++.+++++.++|++++++|+++++||...+ ..|+|++|||+.++++||++++||+||||++|++|+|+||
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 415 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAA----DRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEE 415 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCC----SSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCC----CCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHH
Confidence 999999999999999999999999999999997531 2589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 435 ai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++|++.|+|+
T Consensus 416 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~gl~~f~~~K~v~ 492 (500)
T 1o04_A 416 VVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDV-FGAQSPFGGYKMSGSG--RELGEYGLQAYTEVKTVT 492 (500)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSC-CCTTSCBCCSGGGEES--CBSTGGGGGGGEEEEEEE
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC-CCCCCCCCCcCCCCCC--ccchHHHHHHhcceEEEE
Confidence 9999999999999999999999999999999999999998754 3478999999999999 579999999999999998
Q ss_pred ecc
Q 009407 515 QQW 517 (535)
Q Consensus 515 ~~~ 517 (535)
.++
T Consensus 493 ~~~ 495 (500)
T 1o04_A 493 VKV 495 (500)
T ss_dssp EEC
T ss_pred Eec
Confidence 765
No 25
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=7.2e-103 Score=841.14 Aligned_cols=477 Identities=31% Similarity=0.505 Sum_probs=449.3
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
++.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 4 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2ve5_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34568999999998877889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
++|++++++|+|||..+++. |+..+++.++++++......+...+ ...+...++.++|+|||++|+|||||+.+.+++
T Consensus 84 ~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~ 162 (490)
T 2ve5_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP-LRETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEE-EETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceeeEeeccccEEEEECCCcchHHHHHHH
Confidence 99999999999999999996 9999999999999887776655444 234667889999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH-
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARA- 274 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a- 274 (535)
+++||++||+||+|||+.+|.++..|++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 163 ~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~ 242 (490)
T 2ve5_A 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS 242 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhch
Confidence 999999999999999999999999999999999999999999999 678999999999999999999999999999999
Q ss_pred hcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 275 SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 275 ~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
+.+++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|++
T Consensus 243 a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~ 322 (490)
T 2ve5_A 243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDEN 322 (490)
T ss_dssp HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred hccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999988888 899999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+++||++++.+++++.++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 323 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~d 402 (490)
T 2ve5_A 323 TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDED 402 (490)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHH
Confidence 99999999999999999999999999999999976321112468999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|.+|+++||+.|+|
T Consensus 403 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~pfGG~k~SG~G--~~~G~~~~~~f~~~k~v 479 (490)
T 2ve5_A 403 EAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGES-PAEMPVGGYKQSGVG--RENGLTTLAHYTRIKSV 479 (490)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEE
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCCCCCCCC--CcchHHHHHHhheeEEE
Confidence 999999999999999999999999999999999999999997543 478999999999999 57999999999999999
Q ss_pred EeccC
Q 009407 514 TQQWR 518 (535)
Q Consensus 514 ~~~~~ 518 (535)
++++.
T Consensus 480 ~~~~~ 484 (490)
T 2ve5_A 480 QVELG 484 (490)
T ss_dssp EEECS
T ss_pred EEccC
Confidence 88764
No 26
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.2e-102 Score=839.54 Aligned_cols=480 Identities=21% Similarity=0.359 Sum_probs=445.9
Q ss_pred ccccccCCCCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHH
Q 009407 30 KLYSKQHNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKL 109 (535)
Q Consensus 30 ~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 109 (535)
..|+..+-+..++.||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++
T Consensus 13 ~~~~~~~~~~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 90 (500)
T 2j6l_A 13 AWLKELGLREENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQI 90 (500)
T ss_dssp GGGGGGTCCSEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 3555566667788999999994 46789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcc
Q 009407 110 QELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFP 189 (535)
Q Consensus 110 a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P 189 (535)
++.|++++++|+++++.|+|||..++..|+..+++.++++++..+.+.++..+....+...++.++|+|||++|+|||||
T Consensus 91 a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 170 (500)
T 2j6l_A 91 GDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFP 170 (500)
T ss_dssp HHHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSST
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcch
Confidence 99999999999999999999999999899999999999998877666555444222344567889999999999999999
Q ss_pred hhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHH----HcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChH
Q 009407 190 AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAM----EAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNV 265 (535)
Q Consensus 190 ~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~----~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~ 265 (535)
+.++++++++||++||+||+|||+.+|.++..+++++. ++|+|+|++|+|+|+.++++.|+.||+||+|+||||+.
T Consensus 171 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~ 250 (500)
T 2j6l_A 171 VAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQ 250 (500)
T ss_dssp THHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHH
T ss_pred hhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHH
Confidence 99999999999999999999999999999999988875 56999999999999778899999999999999999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcc
Q 009407 266 AGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKAL 344 (535)
Q Consensus 266 ~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l 344 (535)
+|+.|++.++++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++
T Consensus 251 ~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 330 (500)
T 2j6l_A 251 VGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQI 330 (500)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999988888 899999999999999
Q ss_pred cccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccce
Q 009407 345 KVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVL 424 (535)
Q Consensus 345 ~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl 424 (535)
++|+|.|+++++|||+++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||+
T Consensus 331 ~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 406 (500)
T 2j6l_A 331 RVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMD----RPGNYVEPTIVTGLGHDASIAHTETFAPIL 406 (500)
T ss_dssp CBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCS----SSSSCBCCEEEESCCTTCHHHHSCCSSSEE
T ss_pred ccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccC----CCCCEEcCEEEECCCCcChhhcCcccCceE
Confidence 9999999999999999999999999999999999999999997532 358999999999999999999999999999
Q ss_pred EEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHH--hhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHH
Q 009407 425 LCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQ--TEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKA 502 (535)
Q Consensus 425 ~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~--~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~ 502 (535)
+|++|+|+||||+++|+++|||+++|||+|.+++++++ +++++|+|+||++.....+.+||||+|.||+| +++|.+
T Consensus 407 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G--~~~g~~ 484 (500)
T 2j6l_A 407 YVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGG--RESGSD 484 (500)
T ss_dssp EEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSC--CEESTT
T ss_pred EEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCC--CcchHH
Confidence 99999999999999999999999999999999999999 77999999999876544578999999999999 679999
Q ss_pred HHHhchheeEEEecc
Q 009407 503 GVNFYTQIKTVTQQW 517 (535)
Q Consensus 503 gl~~~t~~k~v~~~~ 517 (535)
|+++|++.|+|++++
T Consensus 485 ~~~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 485 AWKQYMRRSTCTINY 499 (500)
T ss_dssp GGGGGEEEEEEEEEC
T ss_pred HHHHhhceEEEEEeC
Confidence 999999999998754
No 27
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.1e-102 Score=836.53 Aligned_cols=470 Identities=27% Similarity=0.407 Sum_probs=424.4
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
+.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRD 84 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 44678999999987778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCC-CCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNV-SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
+|++++++|+|||..+++.|+..+++.+++++...+.+.+...+.. ..+...+++++|+|||++|+|||||+++.++++
T Consensus 85 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 164 (485)
T 4dng_A 85 DIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSI 164 (485)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHH
Confidence 9999999999999999999999999999999988877766654422 345678899999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHH-HHHHHHHHHcCCCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 198 PVAVTCGNTFVLKPSEKDPGAS-IMLAELAMEAGLPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~-~~l~~~l~~aGlP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
++||++||+||+|||+.+|.++ ..|++++.++|+|+|++|+|+|++ +.++.|++||+|++|+||||+.+|+.|++.++
T Consensus 165 ~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa 244 (485)
T 4dng_A 165 APAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAG 244 (485)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHh
Confidence 9999999999999999999999 999999999999999999999965 58899999999999999999999999999999
Q ss_pred cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCC
Q 009407 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADA 354 (535)
Q Consensus 276 ~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~ 354 (535)
++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++
T Consensus 245 ~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~ 324 (485)
T 4dng_A 245 RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKT 324 (485)
T ss_dssp HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTC
T ss_pred hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCC
Confidence 999999999999999999999999999999999999999999999999988877 8999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHH
Q 009407 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434 (535)
Q Consensus 355 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~e 434 (535)
++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 325 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e 397 (485)
T 4dng_A 325 VVGPLINERQIEKALEIIEQAKTDGIELAVEGKR-------VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQE 397 (485)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHH
Confidence 9999999999999999999999999999999863 589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 435 ai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
||+++|+++|||+++|||+|.++++++++++++|+|+||+++....+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 398 Ai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~t~~k~v~ 475 (485)
T 4dng_A 398 AIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVG--RFGNPWVVEEFTVTKWIS 475 (485)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC------------------------CHHHHHHHEEEEEEE
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCC--ccchHHHHHHhhceEEEE
Confidence 999999999999999999999999999999999999999986444678999999999999 578999999999999998
Q ss_pred ecc
Q 009407 515 QQW 517 (535)
Q Consensus 515 ~~~ 517 (535)
+++
T Consensus 476 ~~~ 478 (485)
T 4dng_A 476 IQK 478 (485)
T ss_dssp EEC
T ss_pred Eec
Confidence 876
No 28
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=2.7e-102 Score=838.49 Aligned_cols=471 Identities=27% Similarity=0.424 Sum_probs=428.9
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
.+.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHR 89 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhH
Confidence 34567899999998877889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCC-CCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNV-SNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
++|++++++|+|||..+++.|+..+++.+++++...+...+ ..+.. ..+...++.++|+|||++|+|||||+++++++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (508)
T 3r64_A 90 EEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRS 168 (508)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 99999999999999999999999999999999988766555 33322 24567889999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHH-HHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGAS-IMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~-~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
+++||++||+||+|||+.+|.++ ..+++++.++|+|+|++|+|+|+ .+.++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 169 ~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a 248 (508)
T 3r64_A 169 VAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELA 248 (508)
T ss_dssp HHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHH
T ss_pred HHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999 99999999999999999999995 78899999999999999999999999999999
Q ss_pred hc--CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCC
Q 009407 275 SA--KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTE 351 (535)
Q Consensus 275 ~~--~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~ 351 (535)
++ +++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|
T Consensus 249 a~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 328 (508)
T 3r64_A 249 INGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSA 328 (508)
T ss_dssp HSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCcc
Confidence 98 89999999999999999999999999999999999999999999999988877 8999999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCC
Q 009407 352 ADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADS 431 (535)
Q Consensus 352 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~ 431 (535)
+++++||++++.+++++.++|++++++|+++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|
T Consensus 329 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (508)
T 3r64_A 329 EGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI-------EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADD 401 (508)
T ss_dssp SSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE-------ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC-------CCcEEecEEEecCCCCChhhcccccCceEEEEEeCC
Confidence 9999999999999999999999999999999999863 589999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhee
Q 009407 432 LEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511 (535)
Q Consensus 432 ~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k 511 (535)
+||||+++|+++|||++||||+|.++++++++++++|+|+||+++....+.+||||+|.||+| +++|++|+++||+.|
T Consensus 402 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~G--r~~G~~~l~~ft~~k 479 (508)
T 3r64_A 402 EAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLG--RFNGDWAIEEFTTDR 479 (508)
T ss_dssp HHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC----------------------CCCHHHHHHHTEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCC--cCccHHHHHHhhceE
Confidence 999999999999999999999999999999999999999999986444678999999999999 578999999999999
Q ss_pred EEEeccC
Q 009407 512 TVTQQWR 518 (535)
Q Consensus 512 ~v~~~~~ 518 (535)
+|++++.
T Consensus 480 ~v~~~~~ 486 (508)
T 3r64_A 480 WIGIKRS 486 (508)
T ss_dssp EEEEECC
T ss_pred EEEEecc
Confidence 9988763
No 29
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=3.1e-102 Score=832.33 Aligned_cols=457 Identities=30% Similarity=0.474 Sum_probs=427.7
Q ss_pred ceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 009407 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAM 122 (535)
Q Consensus 43 ~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 122 (535)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999975 45 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhh
Q 009407 123 NITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVT 202 (535)
Q Consensus 123 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALa 202 (535)
++++|+|||..+++.|+..+++.+++++.....+.++..+. .+...++.++|+|||++|+|||||+.+.++++++||+
T Consensus 79 ~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 156 (486)
T 3pqa_A 79 ILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIA 156 (486)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC--TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC--CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998887766655442 2567889999999999999999999999999999999
Q ss_pred cCCeeeecCCCCChHHHHHHHHHHHHc----CCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 203 CGNTFVLKPSEKDPGASIMLAELAMEA----GLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 203 aGN~VVlKps~~~~~~~~~l~~~l~~a----GlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
+||+||+|||+.+|.++..+++++.++ |+|+|++|+|+|+ .++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 157 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa-- 234 (486)
T 3pqa_A 157 TGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG-- 234 (486)
T ss_dssp TTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--
Confidence 999999999999999999999999999 9999999999995 467899999999999999999999999999887
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCc
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADL 356 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~ 356 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|+|+++++
T Consensus 235 ~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 314 (486)
T 3pqa_A 235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDV 314 (486)
T ss_dssp SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSB
T ss_pred CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 8999999999999999999999999999999999999999999999988888 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH
Q 009407 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI 436 (535)
Q Consensus 357 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai 436 (535)
|||+++.+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||
T Consensus 315 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi 385 (486)
T 3pqa_A 315 GPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR-------DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMI 385 (486)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC-------CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHH
Confidence 99999999999999999999999999999863 5899999999 9999999999999999999999999 9999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 437 KIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 437 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+++|+++|||++||||+|.++++++++++++|+|+||+++.+..+.+||||+|.||+| +++|++|+++||+.|+|+.+
T Consensus 386 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G--r~~g~~gl~~f~~~k~v~~~ 463 (486)
T 3pqa_A 386 DIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLG--REGVKYAMEEMSNIKTIIIS 463 (486)
T ss_dssp HHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEES--CBSHHHHHHHTEEEEEEEEE
T ss_pred HHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCC--CCCcHHHHHHhhceEEEEEc
Confidence 9999999999999999999999999999999999999986544458999999999999 68999999999999999876
Q ss_pred c
Q 009407 517 W 517 (535)
Q Consensus 517 ~ 517 (535)
+
T Consensus 464 ~ 464 (486)
T 3pqa_A 464 K 464 (486)
T ss_dssp C
T ss_pred C
Confidence 5
No 30
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=4.3e-102 Score=832.80 Aligned_cols=465 Identities=30% Similarity=0.478 Sum_probs=439.6
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 14 ~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 91 (487)
T 2w8n_A 14 DSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLA 91 (487)
T ss_dssp SEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999754 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
+++++|+|||..+++.|+..+++.++++++..+...++..+....+...++.++|+|||++|+|||||++++++++++||
T Consensus 92 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 171 (487)
T 2w8n_A 92 RIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAAL 171 (487)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999999887776666544223455678899999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceeccc---C-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVH---G-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~---g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
++||+||+|||+.+|.++..|++++.++|+|+|++|+|+ | +.++++.|++||+||+|+||||+.+|+.|++.++++
T Consensus 172 aaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~ 251 (487)
T 2w8n_A 172 AAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANS 251 (487)
T ss_dssp HHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTT
T ss_pred HcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999 8 567889999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhc-ccccCCCCCCCC
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKA-LKVNAGTEADAD 355 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~-l~vG~p~~~~~~ 355 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|++++++ +++|+|.|++++
T Consensus 252 ~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~ 331 (487)
T 2w8n_A 252 VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTT 331 (487)
T ss_dssp TCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCC
T ss_pred CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCc
Confidence 9999999999999999999999999999999999999999999999988888 89999999999999 999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCc-eeccEEEecCCCCcccccccccccceEEeecCCHHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN-FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~-~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~e 434 (535)
+|||+++.+++++.++|++++++|+++++||... +.|+ |++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 332 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-----~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~e 406 (487)
T 2w8n_A 332 QGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-----QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEE 406 (487)
T ss_dssp BCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-----TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-----CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHH
Confidence 9999999999999999999999999999999752 2588 999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 435 ai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 407 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~PfGG~~~SG~G--~~~G~~~l~~f~~~k~v~ 483 (487)
T 2w8n_A 407 AIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS-SVECPFGGVKQSGLG--REGSKYGIDEYLELKYVC 483 (487)
T ss_dssp HHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCC-CTTSCBCCSGGGEES--CBSTTTGGGGGEEEEEEE
T ss_pred HHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCC-CCCCCCCCCCCCCcC--CCchHHHHHHhcCccEEE
Confidence 99999999999999999999999999999999999999987643 467999999999999 679999999999999997
Q ss_pred ec
Q 009407 515 QQ 516 (535)
Q Consensus 515 ~~ 516 (535)
.+
T Consensus 484 ~~ 485 (487)
T 2w8n_A 484 YG 485 (487)
T ss_dssp EC
T ss_pred Ee
Confidence 64
No 31
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1e-101 Score=832.03 Aligned_cols=464 Identities=27% Similarity=0.411 Sum_probs=437.8
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch-hccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP-SWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
+++||||+|+.+. .+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++
T Consensus 19 ~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 96 (501)
T 1uxt_A 19 YPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDV 96 (501)
T ss_dssp ECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4679999999763 7899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCC--CC--CceeeeeeccCceEEeecCCCcchhhHhh
Q 009407 120 LAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNV--SN--GIDTYSLREPLGVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 195 (535)
|++++++|+|||..+++.|+..+++.+++++...+...++..+.. .. +...++.++|+|||++|+|||||++++++
T Consensus 97 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (501)
T 1uxt_A 97 FAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVN 176 (501)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHH
Confidence 999999999999999999999999999999988777666554421 22 34678999999999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa 256 (501)
T 1uxt_A 177 KITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG 256 (501)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC
T ss_pred HHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999996688899999999999999999999999999987
Q ss_pred cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCC
Q 009407 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADA 354 (535)
Q Consensus 276 ~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~ 354 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++
T Consensus 257 --l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 334 (501)
T 1uxt_A 257 --VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTV 334 (501)
T ss_dssp --SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred --CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCC
Confidence 8999999999999999999999999999999999999999999999988887 8999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCC-ceeccEEEecCC---CCcccccccccccceEEeecC
Q 009407 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHG-NFIGPTILTDVT---ADMECYKEEIFGPVLLCMQAD 430 (535)
Q Consensus 355 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g-~~~~Ptvl~~v~---~d~~i~~eE~FgPvl~v~~~~ 430 (535)
++|||+++.+++++.++|++++++|+++++||.. .| +|++|||+.+++ +||++++||+||||++|++|+
T Consensus 335 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~-------~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~ 407 (501)
T 1uxt_A 335 DVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR-------LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVK 407 (501)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB-------CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEES
T ss_pred cccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeC
Confidence 9999999999999999999999999999999863 47 899999999999 999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhe
Q 009407 431 SLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510 (535)
Q Consensus 431 ~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~ 510 (535)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++....+.+||||+|.||+| +++|++|+++||+.
T Consensus 408 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G--~~~G~~~l~~f~~~ 485 (501)
T 1uxt_A 408 DLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVF--REGIGYAVEAVTAY 485 (501)
T ss_dssp SHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEES--CBSTTTTHHHHEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCC--ccChHHHHHHhCce
Confidence 9999999999999999999999999999999999999999999873234578999999999999 57999999999999
Q ss_pred eEEEecc
Q 009407 511 KTVTQQW 517 (535)
Q Consensus 511 k~v~~~~ 517 (535)
|+|+.++
T Consensus 486 k~v~~~~ 492 (501)
T 1uxt_A 486 KTIVFNY 492 (501)
T ss_dssp EEEEEEC
T ss_pred eEEEEec
Confidence 9998765
No 32
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=4.7e-101 Score=830.24 Aligned_cols=468 Identities=29% Similarity=0.459 Sum_probs=436.8
Q ss_pred CCCceecCeeeeCCCCCeEEeecCC-CCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 40 RVPNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 40 ~~~~~I~g~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
.+++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (516)
T 1uzb_A 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKR 114 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999963 5789999999 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCcccc-CCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP-NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
+|++++++|+|||..+++.|+..+++.+++++...+.+.+...+ ....+...++.++|+|||++|+|||||++++++++
T Consensus 115 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 194 (516)
T 1uzb_A 115 ELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMI 194 (516)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999877766654322 12235567889999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh-
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS- 275 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~- 275 (535)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+++++|+.||+||+|+||||+.+|+.|++.++
T Consensus 195 a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 274 (516)
T 1uzb_A 195 VGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR 274 (516)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTS
T ss_pred HHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999 5678999999999999999999999999999998
Q ss_pred -----cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCC
Q 009407 276 -----AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAG 349 (535)
Q Consensus 276 -----~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p 349 (535)
++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|
T Consensus 275 ~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 354 (516)
T 1uzb_A 275 LAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA 354 (516)
T ss_dssp CCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG
T ss_pred ccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC
Confidence 789999999999999999999999999999999999999999999999988887 89999999999999999999
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeec
Q 009407 350 TEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQA 429 (535)
Q Consensus 350 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~ 429 (535)
++++++|||+++.+++++.++|++++++| ++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 355 -~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~----~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 428 (516)
T 1uzb_A 355 -EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLE----GEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV 428 (516)
T ss_dssp -GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCS----SSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred -ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCC----CCCcEECCEEEECCCCCCHhhhccccCceEEEEEe
Confidence 99999999999999999999999999999 8999986421 35899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCC-CCCCCCCccCCCCCCCCCCCcchHHHHHhch
Q 009407 430 DSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFYT 508 (535)
Q Consensus 430 ~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t 508 (535)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++. ...+.+||||+|.||+|+ +++|.+++++||
T Consensus 429 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~g~~~l~~f~ 507 (516)
T 1uzb_A 429 KDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA-KTGALDYLRLFL 507 (516)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCC-CBTSHHHHHTTE
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCC-ccchHHHHHHcC
Confidence 999999999999999999999999999999999999999999998653 345789999999999995 368999999999
Q ss_pred heeEEEec
Q 009407 509 QIKTVTQQ 516 (535)
Q Consensus 509 ~~k~v~~~ 516 (535)
+.|+|+.+
T Consensus 508 ~~k~v~~~ 515 (516)
T 1uzb_A 508 EMKAVAER 515 (516)
T ss_dssp EEEEEEEE
T ss_pred CeeEEEec
Confidence 99999764
No 33
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=2.7e-101 Score=824.71 Aligned_cols=452 Identities=25% Similarity=0.362 Sum_probs=429.4
Q ss_pred eEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh
Q 009407 57 YIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ 136 (535)
Q Consensus 57 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 136 (535)
+++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCCh
Q 009407 137 GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDP 216 (535)
Q Consensus 137 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~ 216 (535)
.|+..+++.+++++...+...+...+ ...+...++.++|+|||++|+|||||++++++++++||++||+||+|||+.+|
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 163 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKL-NSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP 163 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEE-CCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeec-cCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 99999999999999887766555443 22456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCcCceecccCChh-HHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCC
Q 009407 217 GASIMLAELAMEAGLPDGVLNIVHGTHD-TVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP 295 (535)
Q Consensus 217 ~~~~~l~~~l~~aGlP~g~v~vv~g~~~-~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~ 295 (535)
.++..|++++.++|+|+|++|+|+|+++ .++ |+.||+||+|+||||+.+|+.|++.++++++|+++|||||||+||++
T Consensus 164 ~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~ 242 (484)
T 3ros_A 164 GSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLD 242 (484)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCC
Confidence 9999999999999999999999999654 566 99999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 009407 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQS 374 (535)
Q Consensus 296 dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~ 374 (535)
|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++|||+++.+++++.++|++
T Consensus 243 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 322 (484)
T 3ros_A 243 DADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKE 322 (484)
T ss_dssp TCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988888 899999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCC
Q 009407 375 GIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454 (535)
Q Consensus 375 a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d 454 (535)
++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 323 a~~~Ga~v~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d 398 (484)
T 3ros_A 323 AIDAGAKVFYQYPEID----SKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSD 398 (484)
T ss_dssp HHHTTCEEEEECCCCC----CSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSC
T ss_pred HHHcCCeEEecCCcCC----CCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCC
Confidence 9999999999997532 469999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 455 GAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 455 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|+.++
T Consensus 399 ~~~a~~~~~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 399 IDRAKKVSAQIETGMTVINGRWI-TSGELPFGGIKKSGYG--RELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHHHHHHHHSCSSCCEETSCCC-CCTTSCBCCSGGGEES--CBSHHHHHTTTCEEEEEEECG
T ss_pred HHHHHHHHHhCccceEEECCCCC-CCCCCCcCCcCcccCC--cCchHHHHHHhheeEEEEECC
Confidence 99999999999999999999653 4578999999999999 689999999999999998764
No 34
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=2.9e-101 Score=825.10 Aligned_cols=463 Identities=30% Similarity=0.456 Sum_probs=434.8
Q ss_pred CCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 40 ~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++
T Consensus 4 ~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 81 (475)
T 1euh_A 4 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 81 (475)
T ss_dssp BCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 357899999997643 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCC----cee-eeeeccCceEEeecCCCcchhhHh
Q 009407 120 LAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNG----IDT-YSLREPLGVCAGICPFNFPAMIPL 194 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~I~p~N~P~~~~~ 194 (535)
|++++++|+|||..+++.|+..+++.+++++...+...++..+....+ ... ++.++|+|||++|+|||||+.+.+
T Consensus 82 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (475)
T 1euh_A 82 IGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAG 161 (475)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHH
Confidence 999999999999999999999999999999987766555433312123 456 889999999999999999999999
Q ss_pred hhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHH
Q 009407 195 WMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYAR 273 (535)
Q Consensus 195 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 273 (535)
+++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .+.++.|+.||+||+|+||||+.+|+.|++.
T Consensus 162 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 241 (475)
T 1euh_A 162 SKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 241 (475)
T ss_dssp HHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999996 4688999999999999999999999999998
Q ss_pred HhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCC
Q 009407 274 ASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEA 352 (535)
Q Consensus 274 a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~ 352 (535)
++ ++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|
T Consensus 242 aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~- 318 (475)
T 1euh_A 242 AG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED- 318 (475)
T ss_dssp TT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-
T ss_pred cC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-
Confidence 87 8999999999999999999999999999999999999999999999988887 8999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCH
Q 009407 353 DADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSL 432 (535)
Q Consensus 353 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~ 432 (535)
++++|||+++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~-------~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 391 (475)
T 1euh_A 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391 (475)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCH
Confidence 999999999999999999999999999999999863 4899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcC-CCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhee
Q 009407 433 EEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINV-PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511 (535)
Q Consensus 433 ~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~-~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k 511 (535)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+ +... .+.+||||+|.||+| +++|++|+++||+.|
T Consensus 392 ~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~-~~~~pfGG~k~SG~G--~~~g~~~~~~~~~~k 468 (475)
T 1euh_A 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG-TDNFPFLGAKKSGAG--IQGVKYSIEAMTTVK 468 (475)
T ss_dssp HHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC-STTSCBCCEETTEES--CBSHHHHHHHTEEEE
T ss_pred HHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC-CCCCCcCCCCCCCcC--CCccHHHHHHhCCee
Confidence 999999999999999999999999999999999999999998 6543 578999999999999 689999999999999
Q ss_pred EEEecc
Q 009407 512 TVTQQW 517 (535)
Q Consensus 512 ~v~~~~ 517 (535)
+|+.++
T Consensus 469 ~v~~~~ 474 (475)
T 1euh_A 469 SVVFDI 474 (475)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 998754
No 35
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=3.1e-101 Score=826.02 Aligned_cols=466 Identities=31% Similarity=0.469 Sum_probs=417.9
Q ss_pred CCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 40 ~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 86 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDD 86 (478)
T ss_dssp CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45789999999987788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHh-hhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhh
Q 009407 120 LAMNITTEQGKTLKDA-QGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 198 (535)
|++++++|+|||..++ ..|+..+++.++++++......+... +...++.++|+|||++|+|||||+++++++++
T Consensus 87 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 161 (478)
T 3ty7_A 87 IVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLA 161 (478)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHHH
Confidence 9999999999999999 78999999999999987776554321 23467899999999999999999999999999
Q ss_pred hhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 199 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
+||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++++
T Consensus 162 ~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~ 241 (478)
T 3ty7_A 162 AAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKD 241 (478)
T ss_dssp HHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTT
T ss_pred HHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999 558899999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCc
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADL 356 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~ 356 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++
T Consensus 242 ~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 321 (478)
T 3ty7_A 242 FKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQV 321 (478)
T ss_dssp TCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred CCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999988888 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH
Q 009407 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI 436 (535)
Q Consensus 357 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai 436 (535)
||++++.+++++.++|++++++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 322 gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~-~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi 400 (478)
T 3ty7_A 322 GPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP-EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAI 400 (478)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCc-cccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHH
Confidence 9999999999999999999999999999994321 112469999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 437 KIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 437 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
+++|+++|||+++|||+|.++++++++++++|+|+||+ . ...+.+||||+|.||+| +++|++|+++||+.|+|+.
T Consensus 401 ~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~-~~~~~~PfGG~k~SG~G--~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 401 QIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-A-GRKPDLPFGGYKQSGLG--REWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-C-C------------------------CCGGGEEEEEEET
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-C-CCCCCCCcCCcCcCcCC--ccchHHHHHHhcCeEEEEE
Confidence 99999999999999999999999999999999999999 3 33468999999999999 5799999999999999874
No 36
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=3.7e-99 Score=807.11 Aligned_cols=455 Identities=28% Similarity=0.456 Sum_probs=431.2
Q ss_pred CCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChH
Q 009407 54 SSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLK 133 (535)
Q Consensus 54 ~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 133 (535)
+..+++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCC
Q 009407 134 DAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSE 213 (535)
Q Consensus 134 ~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 213 (535)
+++.|+..+++.++++++......+.. +....+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+
T Consensus 85 ~a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~ 163 (462)
T 3etf_A 85 QARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAP 163 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCC
Confidence 999999999999999998877665543 2223455678899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeee
Q 009407 214 KDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIV 293 (535)
Q Consensus 214 ~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV 293 (535)
.+|.++..+++++.++|+|+|++|+|+|+.+.+..|+.||+|+.|+||||+.+|+.|++.++++++|+++|||||||+||
T Consensus 164 ~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV 243 (462)
T 3etf_A 164 NVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243 (462)
T ss_dssp TCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEE
T ss_pred CCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEE
Confidence 99999999999999999999999999998888999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHH
Q 009407 294 LPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLI 372 (535)
Q Consensus 294 ~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i 372 (535)
++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|
T Consensus 244 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i 323 (462)
T 3etf_A 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQV 323 (462)
T ss_dssp CTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999988877 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEec
Q 009407 373 QSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452 (535)
Q Consensus 373 ~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t 452 (535)
++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 324 ~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 324 QASVAEGARLLLGGEKIA----GEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHTTCEEEECCSBCS----SSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHCCCEEEeCCcccC----CCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 999999999999997543 4699999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 453 SSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 453 ~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|+.+
T Consensus 400 ~d~~~a~~~~~~l~aG~v~vN~~~~-~~~~~PfGG~k~SG~G--~~~g~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 400 ADDTLAAEMAARLECGGVFINGYSA-SDARVAFGGVKKSGFG--RELSHFGLHEFCNVQTVWKN 460 (462)
T ss_dssp SCHHHHHHHHHHCCSSEEEESSCCC-CCTTSCBCCSGGGEEC--CBSHHHHHHTTEEEEEEEEC
T ss_pred CCHHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCcCCCCCC--ccchHHHHHHHhceeEEEEe
Confidence 9999999999999999999999754 3578999999999999 68999999999999998763
No 37
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.8e-99 Score=809.69 Aligned_cols=461 Identities=27% Similarity=0.383 Sum_probs=433.5
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
++||||+|+.+. +..++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 85 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA 85 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999864 4679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
+++++|+|||..+++.|+..+++.+++++...+...+...+. ..+...++.++|+|||++|+|||||+.++++++++||
T Consensus 86 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 164 (490)
T 3ju8_A 86 RVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGP-LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPAL 164 (490)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEE-ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHH
Confidence 999999999999999999999999999998777666554331 2234556779999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeE
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v 281 (535)
++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.+.+++|+.||+||+|+||||+.+|+.|++.++.+++|+
T Consensus 165 aaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v 244 (490)
T 3ju8_A 165 LAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKI 244 (490)
T ss_dssp HHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSE
T ss_pred HcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCc
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999998
Q ss_pred -EEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC--hhHHHHHHHHHHhcccccC-CCCCCCCcC
Q 009407 282 -QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD--SKSWEDKLVERAKALKVNA-GTEADADLG 357 (535)
Q Consensus 282 -~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~--~d~f~~~l~~~~~~l~vG~-p~~~~~~~G 357 (535)
++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+||+++ +|+|+++|+++++++++|+ |.|+++++|
T Consensus 245 ~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~G 324 (490)
T 3ju8_A 245 LALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMG 324 (490)
T ss_dssp EEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBC
T ss_pred EEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccc
Confidence 799999999999999999999999999999999999999999998887 6999999999999999999 999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHH
Q 009407 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIK 437 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~ 437 (535)
|++++.+++++.++|++++++|+++++||...+ ..|+|++|||+. ++++|++++||+||||++|++|+|+||||+
T Consensus 325 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~ 399 (490)
T 3ju8_A 325 AVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPI----DGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIR 399 (490)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCS----TTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEECCCccC----CCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999997543 479999999998 999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 438 IVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 438 ~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
++|+++|||++||||+|.++++++++++++|+|+||++..+..+.+||||+|.||++ |+++|++.|+|+...
T Consensus 400 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~--------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 400 EANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH--------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS--------CCEETTHHHHHEEEE
T ss_pred HHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh--------HHHhhheeEEEEEec
Confidence 999999999999999999999999999999999999986555678999999999875 379999999988654
No 38
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=9.6e-99 Score=815.70 Aligned_cols=472 Identities=23% Similarity=0.313 Sum_probs=436.2
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhc
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 116 (535)
+..+++||||+|+.+. ..+.++||+| |+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++
T Consensus 61 ~~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~ 138 (563)
T 4e3x_A 61 TEAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGP 138 (563)
T ss_dssp CEECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTT
T ss_pred CccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Confidence 4568899999999753 4678999998 799999999999999999999999999999999999999999999999998
Q ss_pred -HHHHHHHHHHHhCCChHHhhhh-HHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHh
Q 009407 117 -IDKLAMNITTEQGKTLKDAQGD-VFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPL 194 (535)
Q Consensus 117 -~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 194 (535)
+++|+.++++|+|||+.+++.| +..+++.+++++.....+.+........+...+.++.|+|||++|+|||||+....
T Consensus 139 ~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~ 218 (563)
T 4e3x_A 139 RRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGN 218 (563)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHH
T ss_pred cHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHH
Confidence 9999999999999999999887 99999999999988877665432212233445677888999999999999999999
Q ss_pred hhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHH
Q 009407 195 WMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYAR 273 (535)
Q Consensus 195 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 273 (535)
+++++|| +||+||+|||+.+|+++..++++|.++|+|+|+||+|+|+ .++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 219 ~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~ 297 (563)
T 4e3x_A 219 LAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQ 297 (563)
T ss_dssp HHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999 5999999999999999999999999999999999999995 4678999999999999999999999999999
Q ss_pred HhcCCC------eEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccc
Q 009407 274 ASAKGK------RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKV 346 (535)
Q Consensus 274 a~~~~~------~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~v 346 (535)
++.+++ |+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+||+++ +|+|+++|+++++++++
T Consensus 298 aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~v 377 (563)
T 4e3x_A 298 VAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKV 377 (563)
T ss_dssp HHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccC
Confidence 999888 49999999999999999999999999999999999999999999988888 89999999999999999
Q ss_pred cCC-CCCCCCcCCCCCHHHHHHHHHHHHHHHH-cCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccce
Q 009407 347 NAG-TEADADLGPVISKQAKERICRLIQSGIE-SGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVL 424 (535)
Q Consensus 347 G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl 424 (535)
|+| .|+++++||++++.+++++.++|+++++ +|+++++||...+ ..|+|++|||+.+++++|++++||+||||+
T Consensus 378 Gdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~----~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl 453 (563)
T 4e3x_A 378 GDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNE----SVGYYVEPCIIESKDPQEPIMKEEIFGPVL 453 (563)
T ss_dssp SCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEEC----SSSCEECCEEEEESCTTCGGGTSCCCSSEE
T ss_pred CCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCC----CCCcEecCEEEecCCCCChhhcCCCcCeEE
Confidence 999 9999999999999999999999999996 7999999997643 469999999999999999999999999999
Q ss_pred EEeecCC--HHHHHHHH-HcCCCCcEEEEecCCHHHHHHHHhhcc--eeEEEEcCCCC-CCCCCCCccCCCCCCCCCCCc
Q 009407 425 LCMQADS--LEEAIKIV-NKNQYGNGAAIFTSSGAAARKFQTEIE--AGQVGINVPIP-VPLPFFSFTGSKASFAGDLNF 498 (535)
Q Consensus 425 ~v~~~~~--~~eai~~~-N~~~~gLsa~V~t~d~~~a~~~~~~l~--~G~V~iN~~~~-~~~~~~pfGG~~~Sg~G~~~~ 498 (535)
+|++|+| +||||+++ |+++|||+++|||+|.+++++++++++ +|+||||+.+. ...+.+||||+|.||+|+ +.
T Consensus 454 ~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~-~~ 532 (563)
T 4e3x_A 454 TVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTND-KP 532 (563)
T ss_dssp EEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCC-CT
T ss_pred EEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCC-cc
Confidence 9999997 79999999 789999999999999999999999975 99999999753 335789999999999985 57
Q ss_pred chHHHHHhchheeEEEecc
Q 009407 499 YGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 499 ~g~~gl~~~t~~k~v~~~~ 517 (535)
+|+++|++|++.|+|+.++
T Consensus 533 ~G~~~l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 533 GGPHYILRWTSPQVIKETH 551 (563)
T ss_dssp TSTTGGGGGBCCEEEEEEC
T ss_pred CCHHHHHHhCceEEEEEeC
Confidence 8999999999999999876
No 39
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=4.6e-98 Score=800.16 Aligned_cols=457 Identities=22% Similarity=0.287 Sum_probs=426.1
Q ss_pred CCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChH
Q 009407 54 SSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLK 133 (535)
Q Consensus 54 ~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 133 (535)
+.++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++++++|+++++.|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS- 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HhhhhHHHHHHHHHHHHhhHHHh-cCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCC
Q 009407 134 DAQGDVFRGLEVVEHSCGMATLQ-MGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPS 212 (535)
Q Consensus 134 ~a~~ev~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps 212 (535)
++..|+...++.+++++...... .........++......++|+|||++|+|||||+++.++++++||++||+||+|||
T Consensus 83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 45679999999999988766544 33333323345667788899999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceee
Q 009407 213 EKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGI 292 (535)
Q Consensus 213 ~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~i 292 (535)
+.+|.++..+++++.++|+|+|++|+++|+.+.+..|+.| +++|+||||+.+|+.|++.++++++|+++|||||||+|
T Consensus 163 ~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~i 240 (474)
T 4h7n_A 163 EIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAI 240 (474)
T ss_dssp TTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEE
T ss_pred ccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCcCccc
Confidence 9999999999999999999999999999999999999987 89999999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 009407 293 VLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRL 371 (535)
Q Consensus 293 V~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~ 371 (535)
|++|||++.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 241 V~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 320 (474)
T 4h7n_A 241 VLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDH 320 (474)
T ss_dssp ECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHH
T ss_pred cCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHH
Confidence 9999999999999999999999999999999988888 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEe
Q 009407 372 IQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451 (535)
Q Consensus 372 i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~ 451 (535)
+++++++|+++++||...+ ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 321 i~~a~~~ga~v~~Gg~~~~---~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~ 397 (474)
T 4h7n_A 321 ILDAVEKGAVIHCGGKVEE---LGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVF 397 (474)
T ss_dssp HHHHHHTTCEEEECCCCEE---ETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEE
T ss_pred HHHHHhhCceeccCCcccc---cCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEE
Confidence 9999999999999987543 2468999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCCCC-CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 452 TSSGAAARKFQTEIEAGQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 452 t~d~~~a~~~~~~l~~G~V~iN~~~~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
|+|.++++++++++++|+|+||+++. ...+.+||||+|.||+|. +++|.+|+++|++.|+|+++.
T Consensus 398 t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~-~~~G~~g~~~f~~~k~v~~~~ 463 (474)
T 4h7n_A 398 AGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGG-SRVGAAGLKRFLRKQAFLIKT 463 (474)
T ss_dssp CSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESC-CSSTTHHHHTTEEEEEEEEEC
T ss_pred eCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCC-CcchHHHHHHhCeEEEEEECC
Confidence 99999999999999999999998753 334789999999999985 468999999999999998875
No 40
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=4.2e-96 Score=835.78 Aligned_cols=471 Identities=30% Similarity=0.414 Sum_probs=442.0
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
..+++||||+|+.+ +.+++++||+| ++++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++
T Consensus 530 ~~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~ 607 (1026)
T 4f9i_A 530 KTYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRL 607 (1026)
T ss_dssp EEECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 46789999999964 57899999998 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
++|++++++|+|||..++..|+..++++++|++.....+.+...+....+...++.++|+|||++|+|||||+++.++++
T Consensus 608 ~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~ 687 (1026)
T 4f9i_A 608 FELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMA 687 (1026)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHH
Confidence 99999999999999999999999999999999988877665443322456678889999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh-
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARAS- 275 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~- 275 (535)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ .++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 688 a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~ 767 (1026)
T 4f9i_A 688 SAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAK 767 (1026)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTS
T ss_pred HHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999995 568999999999999999999999999999988
Q ss_pred -----cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCC
Q 009407 276 -----AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAG 349 (535)
Q Consensus 276 -----~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p 349 (535)
++++|+++|+|||||+||++|||+|.|++.+++|+|.|+||.|++++|+||+++ +|+|+++|+++++++++|+|
T Consensus 768 ~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p 847 (1026)
T 4f9i_A 768 VHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPS 847 (1026)
T ss_dssp CCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred ccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCc
Confidence 468999999999999999999999999999999999999999999999988888 89999999999999999999
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeec
Q 009407 350 TEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQA 429 (535)
Q Consensus 350 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~ 429 (535)
.|+++++||++++.+++++.++|++++++| ++++||...+ ..|+|+.|||+.+++++|++++||+||||++|++|
T Consensus 848 ~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~----~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 922 (1026)
T 4f9i_A 848 EDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPA----GEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRA 922 (1026)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCS----SSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred ccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCC----CCCceecceeeecCCCCccccCceecCcEEEEEEe
Confidence 999999999999999999999999999999 9999986532 24999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCC-CCCCCCccCCCCCCCCCCCcchHHHHHhch
Q 009407 430 DSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPV-PLPFFSFTGSKASFAGDLNFYGKAGVNFYT 508 (535)
Q Consensus 430 ~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t 508 (535)
+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+.. ..+.+||||+|.||+|+ +.+|++++++|+
T Consensus 923 ~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~-~~gG~~~l~~f~ 1001 (1026)
T 4f9i_A 923 KDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGT-KAGGPDYLLHFM 1001 (1026)
T ss_dssp SSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSC-CBTSTTTGGGGE
T ss_pred CCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCC-CcCCHHHHHHhc
Confidence 9999999999999999999999999999999999999999999997643 34789999999999995 468999999999
Q ss_pred heeEEEecc
Q 009407 509 QIKTVTQQW 517 (535)
Q Consensus 509 ~~k~v~~~~ 517 (535)
+.|+|++++
T Consensus 1002 ~~k~v~~~~ 1010 (1026)
T 4f9i_A 1002 DPRVVTENT 1010 (1026)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEec
Confidence 999998876
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=9.5e-96 Score=792.59 Aligned_cols=468 Identities=18% Similarity=0.252 Sum_probs=420.3
Q ss_pred CCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHh-chhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQA-FPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 40 ~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
.+++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+.|+.++.++|.++|+++++.|+++++
T Consensus 7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (534)
T 2y53_A 7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRG 84 (534)
T ss_dssp ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 357899999997644 479999999999999999988 8999999999999 5999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcC-------ccccCCCC-CceeeeeeccC-ceEEeecCCCcc
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG-------EYVPNVSN-GIDTYSLREPL-GVCAGICPFNFP 189 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~P~-GVv~~I~p~N~P 189 (535)
+|++++++|+|||..+++.|+..+++.+++++...+.+.+ +..+.... ....+..++|+ |||++|+|||||
T Consensus 85 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P 164 (534)
T 2y53_A 85 DYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFP 164 (534)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchH
Confidence 9999999999999999998999999999999887665532 21121111 22457889997 999999999999
Q ss_pred hhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcC-CCcCceecccCChhHHHHHHhC-CCcCEEEEeCChHHH
Q 009407 190 AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAG-LPDGVLNIVHGTHDTVNAICDD-ANIRAISFVGSNVAG 267 (535)
Q Consensus 190 ~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~g~v~vv~g~~~~~~~L~~~-~~v~~V~ftGs~~~g 267 (535)
++++++++++||++||+||+|||+.+|.++..+++++.++| +|+|++|+|+|+... +..+ +++|+|+||||+.+|
T Consensus 165 ~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~---l~~~l~~vd~V~FTGS~~~G 241 (534)
T 2y53_A 165 SWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG---LLDQIRSFDVVSFTGSADTA 241 (534)
T ss_dssp THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT---SGGGCCTTCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH---HHhcccccCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999 799999999995421 3333 579999999999999
Q ss_pred HHHHHHHh--cCCCeEEEeCCCcceeeeCCCC-----CHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHH
Q 009407 268 MHIYARAS--AKGKRVQSNMGAKNHGIVLPDA-----NMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVE 339 (535)
Q Consensus 268 ~~i~~~a~--~~~~~v~lelgG~~p~iV~~dA-----dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~ 339 (535)
+.|++.++ +++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|++
T Consensus 242 ~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 321 (534)
T 2y53_A 242 ATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKA 321 (534)
T ss_dssp HHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHH
Confidence 99998775 8899999999999999999999 99999999999999999999999999988888 8999999999
Q ss_pred HHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCC--CCCCCceeccEEEecCCCC--cccc
Q 009407 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVP--GYEHGNFIGPTILTDVTAD--MECY 415 (535)
Q Consensus 340 ~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~--~~~~g~~~~Ptvl~~v~~d--~~i~ 415 (535)
+++++++|+|.|+++++|||+++.+++++.++|+++ .+|+++++||...... +...|+|++|||+.+++++ |+++
T Consensus 322 ~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~ 400 (534)
T 2y53_A 322 KLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLH 400 (534)
T ss_dssp HHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTT
T ss_pred HHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHH
Confidence 999999999999999999999999999999999999 6899999998642110 1135899999999999987 6899
Q ss_pred cccccccceEEeecC---CH-----HHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc--ceeEEEEcCCCC--------
Q 009407 416 KEEIFGPVLLCMQAD---SL-----EEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEI--EAGQVGINVPIP-------- 477 (535)
Q Consensus 416 ~eE~FgPvl~v~~~~---~~-----~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l--~~G~V~iN~~~~-------- 477 (535)
+||+||||++|++|+ |+ ||||+++|+++|||++||||+|.++++++++++ ++|+|+||++..
T Consensus 401 ~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~ 480 (534)
T 2y53_A 401 DVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHG 480 (534)
T ss_dssp TCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSS
T ss_pred hCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccC
Confidence 999999999999999 99 999999999999999999999999999999999 899999998632
Q ss_pred CCCCCCCccCCCCCCCCCCCc-chHHHHHhchheeEEEe
Q 009407 478 VPLPFFSFTGSKASFAGDLNF-YGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 478 ~~~~~~pfGG~~~Sg~G~~~~-~g~~gl~~~t~~k~v~~ 515 (535)
...+.+||||+|.||+| ++ +|++|+++|++.|+|..
T Consensus 481 ~~~~~~pfGG~k~SG~G--r~~~g~~~l~~~~~~k~v~~ 517 (534)
T 2y53_A 481 NVMPMSLHGGPGRAGGG--EELGGLRALAFYHRRSAIQA 517 (534)
T ss_dssp CCCTTSEECCSGGGCSC--CEESGGGGGGGGEEEEEEEE
T ss_pred CCCCCCCCCCcccCCCC--CCcchHHHHHHHhhhheeec
Confidence 12478999999999999 46 69999999999999875
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=3.2e-94 Score=767.02 Aligned_cols=443 Identities=23% Similarity=0.319 Sum_probs=397.0
Q ss_pred CeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHh
Q 009407 56 EYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDA 135 (535)
Q Consensus 56 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 135 (535)
..+++.||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 85 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred h-hhHHHHHHHHHHHHhhHHHhc-CccccC--CCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecC
Q 009407 136 Q-GDVFRGLEVVEHSCGMATLQM-GEYVPN--VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKP 211 (535)
Q Consensus 136 ~-~ev~~~~~~l~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKp 211 (535)
+ .|+..+++.++++++..+... ++..+. ...+...++.++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (457)
T 3lns_A 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP 165 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 8 599999999999987765443 222221 113456789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCccee
Q 009407 212 SEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHG 291 (535)
Q Consensus 212 s~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~ 291 (535)
|+.+|.++..+++++.++ +|+|++|+|+|+.+.++.|++ ++||+|+||||+.+|+.|++.++++++|+++|||||||+
T Consensus 166 s~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~ 243 (457)
T 3lns_A 166 SETTPETSAVIEKIIAEA-FAPEYVAVIQGGRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPL 243 (457)
T ss_dssp CTTCHHHHHHHHHHHHHH-CCTTTEEECCCCHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEE
T ss_pred CCCChHHHHHHHHHHHHh-CCHhhEEEecCCHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCC
Confidence 999999999999999999 999999999998888999998 689999999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHH
Q 009407 292 IVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICR 370 (535)
Q Consensus 292 iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~ 370 (535)
||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|++++++++ |.++ ++||++++.+++++.+
T Consensus 244 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~ 318 (457)
T 3lns_A 244 IVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVS 318 (457)
T ss_dssp EECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHH
T ss_pred eECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999988888 8999999999999887 7776 9999999999999999
Q ss_pred HHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHc-CCCCcEEE
Q 009407 371 LIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNK-NQYGNGAA 449 (535)
Q Consensus 371 ~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~-~~~gLsa~ 449 (535)
+|+++ ++++++||... +.|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||+++
T Consensus 319 ~i~~a---~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~ 390 (457)
T 3lns_A 319 LLEAT---QGQVLVGSQAD-----VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVY 390 (457)
T ss_dssp HHHHC---CSEEEECCCEE-----GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEE
T ss_pred HHHhc---CCeEEeCCccC-----CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEE
Confidence 99985 35999999753 36899999999999999999999999999999999999999999999 99999999
Q ss_pred EecCCHHHHHHHHhhcceeEEEEcCCC-CCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 450 IFTSSGAAARKFQTEIEAGQVGINVPI-PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 450 V~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|||+|.++++++++++++|+|+||++. ....+.+||||+|.||+| +++|++|+++||+.|+|++
T Consensus 391 v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 391 VFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMG--EYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp EECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEEC--CBSHHHHHHHTEEEEEEEE
T ss_pred EECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCC--CCchHHHHHHhhCeeEEEe
Confidence 999999999999999999999999975 334678999999999999 5899999999999999875
No 43
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.1e-92 Score=756.08 Aligned_cols=428 Identities=26% Similarity=0.355 Sum_probs=393.5
Q ss_pred CCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhH
Q 009407 75 TTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMA 153 (535)
Q Consensus 75 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~ 153 (535)
.+.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..++..+++++...
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56678999999999999999999999999999999999999999999999999999999997 59999999888877654
Q ss_pred H-HhcCcccc--CCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcC
Q 009407 154 T-LQMGEYVP--NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAG 230 (535)
Q Consensus 154 ~-~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG 230 (535)
. +....... ....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a- 173 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY- 173 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-
Confidence 3 33322111 0112446788999999999999999999999999999999999999999999999999999999998
Q ss_pred CCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHH
Q 009407 231 LPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAG 310 (535)
Q Consensus 231 lP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~ 310 (535)
+|+|++|+|+|+.+.+..|+.| +||+|+||||+.+|+.|++.++++++|+++|||||||+||++|||+|.|++.+++++
T Consensus 174 lP~gvv~vv~g~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~ 252 (469)
T 3sza_A 174 LDKDLYPVINGGVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGK 252 (469)
T ss_dssp SCTTTSCBCCCSHHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHH
T ss_pred CCcceEEEEECCHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHH
Confidence 9999999999987777888888 799999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccc
Q 009407 311 FGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNI 389 (535)
Q Consensus 311 ~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 389 (535)
|.|+||.|++++||||+++ +|+|+++|+++++++ +|+|.++++++||++++.+++++.++| +|+++++||...
T Consensus 253 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~ 326 (469)
T 3sza_A 253 FMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD 326 (469)
T ss_dssp HGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE
T ss_pred HhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC
Confidence 9999999999999988777 899999999999988 699999999999999999999999998 599999999753
Q ss_pred cCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeE
Q 009407 390 VVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQ 469 (535)
Q Consensus 390 ~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~ 469 (535)
..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+
T Consensus 327 -----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~ 401 (469)
T 3sza_A 327 -----AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGG 401 (469)
T ss_dssp -----TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSE
T ss_pred -----CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcce
Confidence 368999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCC-CCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 470 VGINVPI-PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 470 V~iN~~~-~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
|+||++. ....+.+||||+|.||+| +++|.+|+++||+.|+|+.+.
T Consensus 402 V~vN~~~~~~~~~~~PfGG~k~SG~G--r~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 402 VAANDVIVHITLHSLPFGGVGNSGMG--SYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp EEESCSSGGGSCTTSCBCCCGGGEEC--CBSTHHHHHHTEEEEEEEECC
T ss_pred EEEeCCCCCCCCCCCCcCCccccccC--ccchHHHHHHhhCeeEEEECC
Confidence 9999975 344678999999999999 589999999999999998763
No 44
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.6e-92 Score=762.74 Aligned_cols=458 Identities=20% Similarity=0.263 Sum_probs=412.9
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeE-EecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhc
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVS-QLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~-~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 116 (535)
+...++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEAR 101 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Confidence 34567899999997542 99999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHh--cCccc----cC--CCCCceeeeeeccCceEEeecCCCc
Q 009407 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQ--MGEYV----PN--VSNGIDTYSLREPLGVCAGICPFNF 188 (535)
Q Consensus 117 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~--~~~~~----~~--~~~~~~~~~~~~P~GVv~~I~p~N~ 188 (535)
+++|++++++|+|||..+++.|+..+++.++++++..+.. .+... +. ...+...++.++|+|||++|+||||
T Consensus 102 ~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 181 (528)
T 3v4c_A 102 AEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNF 181 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSS
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcc
Confidence 9999999999999999999999999999999999877652 22221 10 0123456789999999999999999
Q ss_pred chhhHh--hhhhhhhhcCCeeeecCCCCChHHHHHHHHHH----HHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEe
Q 009407 189 PAMIPL--WMFPVAVTCGNTFVLKPSEKDPGASIMLAELA----MEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFV 261 (535)
Q Consensus 189 P~~~~~--~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l----~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ft 261 (535)
|+.+.+ +++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|+|+| +.+++++|+.||+||+|+||
T Consensus 182 P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fT 261 (528)
T 3v4c_A 182 PLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFT 261 (528)
T ss_dssp TTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEE
T ss_pred hHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEE
Confidence 999865 89999999999999999999999999999875 578999999999999 56889999999999999999
Q ss_pred CChHHHHHHHHHHhcCC--CeEEEeCCCcceeeeCCCC---CHHHHHHHHHHHHhhccCCCccCcceEEEeCC--hhHHH
Q 009407 262 GSNVAGMHIYARASAKG--KRVQSNMGAKNHGIVLPDA---NMDATLNALAAAGFGAAGQRCMALSTVVFVGD--SKSWE 334 (535)
Q Consensus 262 Gs~~~g~~i~~~a~~~~--~~v~lelgG~~p~iV~~dA---dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~--~d~f~ 334 (535)
||+.+|+.|++.+++++ +|+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++||||+++ +|+|+
T Consensus 262 GS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~ 341 (528)
T 3v4c_A 262 GSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFT 341 (528)
T ss_dssp SCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHH
T ss_pred CChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHH
Confidence 99999999999999998 9999999999999999999 88999999999999999999999999998885 79999
Q ss_pred HHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCC---
Q 009407 335 DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTAD--- 411 (535)
Q Consensus 335 ~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d--- 411 (535)
++|++++++++.| +.+||++++.+.+++.++++ ++|+++++||.. .|+|++|||+.+++++
T Consensus 342 ~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~-------~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 342 TAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES-------SGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC-------CTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc-------CCceeccEEEEecCccccc
Confidence 9999999998754 57999999888888887764 479999999863 6899999999988887
Q ss_pred cccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecC--CHHHHHHHHhhcc--eeEEEEcCCCC-C-CCCCCCc
Q 009407 412 MECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTS--SGAAARKFQTEIE--AGQVGINVPIP-V-PLPFFSF 485 (535)
Q Consensus 412 ~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~--d~~~a~~~~~~l~--~G~V~iN~~~~-~-~~~~~pf 485 (535)
|++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+|+||+++. . ..+.+||
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pf 485 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVH 485 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCC
T ss_pred ChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCC
Confidence 899999999999999999999999999999999999999999 8999999999998 99999999653 2 3478999
Q ss_pred cC-CCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 486 TG-SKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 486 GG-~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
|| +|.||+|+.+.+|++|+++|++.|++ .++
T Consensus 486 GG~~~~Sg~gr~~~~G~~gl~~~~~~k~~-q~~ 517 (528)
T 3v4c_A 486 GGPYPASTNFGATSVGTMSIRRFLRPVAY-QNM 517 (528)
T ss_dssp CCTTTTBSCTTCCSSSGGGGGGGEEEEEE-ESC
T ss_pred CCCCCCCCCCCCCCCcHHHHHHhchhHHh-hcC
Confidence 99 99999996544599999999999974 444
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.7e-89 Score=739.73 Aligned_cols=446 Identities=16% Similarity=0.203 Sum_probs=403.8
Q ss_pred CCCCCeEEeecCCCCCee-EEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCC
Q 009407 52 SRSSEYIDVINPATQEVV-SQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGK 130 (535)
Q Consensus 52 ~~~~~~~~v~~P~tg~~i-~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 130 (535)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 82 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL 82 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 345678999999999999 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHhhhhHHHHHHHHHHHHhhHHH--hcCccc----cCC-CCC-ceeeeeeccCceEEeecCCCcchhhH--hhhhhhh
Q 009407 131 TLKDAQGDVFRGLEVVEHSCGMATL--QMGEYV----PNV-SNG-IDTYSLREPLGVCAGICPFNFPAMIP--LWMFPVA 200 (535)
Q Consensus 131 ~~~~a~~ev~~~~~~l~~~~~~~~~--~~~~~~----~~~-~~~-~~~~~~~~P~GVv~~I~p~N~P~~~~--~~~l~~A 200 (535)
|..+++.|+..+++.++++++..+. ..+..+ +.. +.+ ...+++++|+|||++|+|||||++++ .+++++|
T Consensus 83 ~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~A 162 (510)
T 1ez0_A 83 PEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASA 162 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHH
Confidence 9999999999999999999887664 222222 101 112 23578999999999999999999985 4999999
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHH----HHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELA----MEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l----~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
|++||+||+|||+.+|.++..+++++ .++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 163 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 242 (510)
T 1ez0_A 163 LAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAH 242 (510)
T ss_dssp HHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhh
Confidence 99999999999999999999999998 568999999999999 6778999999999999999999999999999999
Q ss_pred cCC--CeEEEeCCCcceeeeCCCCCHH--HHHHHHHHHHhhccCCCccCcceEEEeCC--hhHHHHHHHHHHhcccccCC
Q 009407 276 AKG--KRVQSNMGAKNHGIVLPDANMD--ATLNALAAAGFGAAGQRCMALSTVVFVGD--SKSWEDKLVERAKALKVNAG 349 (535)
Q Consensus 276 ~~~--~~v~lelgG~~p~iV~~dAdl~--~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~--~d~f~~~l~~~~~~l~vG~p 349 (535)
+++ +|+++|||||||+||++|||+| .|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++
T Consensus 243 ~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~--- 319 (510)
T 1ez0_A 243 ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP--- 319 (510)
T ss_dssp HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---
T ss_pred ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---
Confidence 886 9999999999999999999999 99999999999999999999999999887 69999999999998873
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHH-cCCEEEeccccccCCCCCCCceeccEEEecCCCC---cccccccccccceE
Q 009407 350 TEADADLGPVISKQAKERICRLIQSGIE-SGARLLLDGRNIVVPGYEHGNFIGPTILTDVTAD---MECYKEEIFGPVLL 425 (535)
Q Consensus 350 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d---~~i~~eE~FgPvl~ 425 (535)
||++++.+.+++.++|+++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||++
T Consensus 320 -------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~--------~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 320 -------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp -------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred -------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC--------CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 688999999999999999984 7999999985 2889999999988777 99999999999999
Q ss_pred EeecCCHHHHHHHHHcCCCCcEEEEecCCH--HHHHHHHhhc--ceeEEEEcCCCCC--CCCCCCccC-CCCCCCCCCCc
Q 009407 426 CMQADSLEEAIKIVNKNQYGNGAAIFTSSG--AAARKFQTEI--EAGQVGINVPIPV--PLPFFSFTG-SKASFAGDLNF 498 (535)
Q Consensus 426 v~~~~~~~eai~~~N~~~~gLsa~V~t~d~--~~a~~~~~~l--~~G~V~iN~~~~~--~~~~~pfGG-~~~Sg~G~~~~ 498 (535)
|++|+|+||||+++|+++|||++||||+|. ++++++++++ ++|+|+||++... ..+.+|||| +|.||+|+.+.
T Consensus 385 v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~ 464 (510)
T 1ez0_A 385 IVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS 464 (510)
T ss_dssp EEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCS
T ss_pred EEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCC
Confidence 999999999999999999999999999987 7999999999 7999999987532 246799999 78999986556
Q ss_pred chHHHHHhchheeEEEe
Q 009407 499 YGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 499 ~g~~gl~~~t~~k~v~~ 515 (535)
+|++|+++|++.|++..
T Consensus 465 ~G~~gl~~~~~~k~~~~ 481 (510)
T 1ez0_A 465 VGAEAIHRWLRPVAYQA 481 (510)
T ss_dssp SSGGGGGGGEEEEEEES
T ss_pred ccHHHHHHhheEEEEcC
Confidence 89999999999987643
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=7.6e-88 Score=766.31 Aligned_cols=435 Identities=24% Similarity=0.345 Sum_probs=407.1
Q ss_pred ecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHh
Q 009407 72 LPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCG 151 (535)
Q Consensus 72 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~ 151 (535)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..++..|+..+++.+++++.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHhcCcc--ccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHc
Q 009407 152 MATLQMGEY--VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEA 229 (535)
Q Consensus 152 ~~~~~~~~~--~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~a 229 (535)
..+...+.. .+ ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 624 ~a~~~~g~~~~~~-~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eA 702 (1001)
T 3haz_A 624 QGRKLFGSETAMP-GPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEA 702 (1001)
T ss_dssp HHHHHHSSCEECC-CCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHHhhcCcccccc-CCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHh
Confidence 887765432 22 345677889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC---CCeEEEeCCCcceeeeCCCCCHHHHHHHH
Q 009407 230 GLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK---GKRVQSNMGAKNHGIVLPDANMDATLNAL 306 (535)
Q Consensus 230 GlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~---~~~v~lelgG~~p~iV~~dAdl~~Aa~~i 306 (535)
|+|+|++|+|+|+++.++.|+.||+|++|+||||+.+|+.|++.++.+ ++|+++|+|||||+||++|||+|.|++.+
T Consensus 703 GlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~i 782 (1001)
T 3haz_A 703 GIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDV 782 (1001)
T ss_dssp TCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHH
T ss_pred CcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHH
Confidence 999999999999765599999999999999999999999999998864 89999999999999999999999999999
Q ss_pred HHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEec
Q 009407 307 AAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLD 385 (535)
Q Consensus 307 v~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~g 385 (535)
++|+|.|+||.|+++++|||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++| ++ +|
T Consensus 783 v~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~g 860 (1001)
T 3haz_A 783 VTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HF 860 (1001)
T ss_dssp HHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EE
T ss_pred HHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-ec
Confidence 99999999999999999988877 89999999999999999999999999999999999999999999999888 88 88
Q ss_pred cccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCC--HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHh
Q 009407 386 GRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADS--LEEAIKIVNKNQYGNGAAIFTSSGAAARKFQT 463 (535)
Q Consensus 386 g~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~--~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~ 463 (535)
|... +.|+|+.|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.++++++++
T Consensus 861 g~~~-----~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~ 933 (1001)
T 3haz_A 861 AGPA-----PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIID 933 (1001)
T ss_dssp ECCC-----CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHH
T ss_pred cccC-----CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHH
Confidence 8643 3599999999974 6889999999999999999996 89999999999999999999999999999999
Q ss_pred hcceeEEEEcCCCCC-CCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 464 EIEAGQVGINVPIPV-PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 464 ~l~~G~V~iN~~~~~-~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
++++|+|+||+++.. ..+.+||||+|.||+|. +++|++|+++|++.|+|++++
T Consensus 934 ~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~-~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 934 RVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGP-KAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp HCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCC-CBTSTTSGGGGEEEEEEEEEC
T ss_pred hCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCC-CCCCHHHHHHhceeeEEEECC
Confidence 999999999997643 34678999999999995 468999999999999998865
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-82 Score=676.50 Aligned_cols=406 Identities=15% Similarity=0.133 Sum_probs=332.5
Q ss_pred EeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHh-------CCC
Q 009407 59 DVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQ-------GKT 131 (535)
Q Consensus 59 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------Gk~ 131 (535)
-++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred hH----HhhhhHHHHHHHHHHHHhhHHHhcCccccCC--CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCC
Q 009407 132 LK----DAQGDVFRGLEVVEHSCGMATLQMGEYVPNV--SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGN 205 (535)
Q Consensus 132 ~~----~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN 205 (535)
.. ++..|+..+++.+++++.......++..+.. ..+...++.++|+|||++|+||| |.+.+ +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 87 4678999999999999976555555443311 13456788999999999999887 87777 89999999999
Q ss_pred eeeecCCCCChHHHHHHHHHHHHc----CCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeE
Q 009407 206 TFVLKPSEKDPGASIMLAELAMEA----GLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281 (535)
Q Consensus 206 ~VVlKps~~~~~~~~~l~~~l~~a----GlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v 281 (535)
+||+|||+.+|.++..|++++.++ | |+|++|+|+|+.++++.|+.||+||+|+||||+.+|+.|++.++ ++|+
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv 244 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPV 244 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCB
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCE
Confidence 999999999999999999999999 9 99999999996678899999999999999999999999999887 8999
Q ss_pred EEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCC
Q 009407 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVI 360 (535)
Q Consensus 282 ~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli 360 (535)
++|||||||+||++|||+|.|++.+++++|.| ||.|++++||||+++ +| ||+
T Consensus 245 ~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~- 297 (463)
T 2h5g_A 245 MGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL- 297 (463)
T ss_dssp CSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH-
T ss_pred EEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH-
Confidence 99999999999999999999999999999999 999999999988777 55 333
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHH
Q 009407 361 SKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVN 440 (535)
Q Consensus 361 ~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N 440 (535)
+.+++++++++|++++.|+.. . ..|+|+ +++|++++||+||||++|++|+|+||||+++|
T Consensus 298 -------~~~~i~~~~~~Ga~v~~G~~~-~----~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN 357 (463)
T 2h5g_A 298 -------FDQIIDMLRVEQVKIHAGPKF-A----SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIH 357 (463)
T ss_dssp -------HHHHHHHHHHTTCEEEECHHH-H----C-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHH
T ss_pred -------HHHHHHHHHhCCCEEEeCCcc-c----ccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHH
Confidence 234578888899999854432 1 234442 57899999999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCC--cchHHHHHhchheeEEEecc
Q 009407 441 KNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLN--FYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 441 ~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~--~~g~~gl~~~t~~k~v~~~~ 517 (535)
+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|.++ .+|++|+++||+.|+|+.++
T Consensus 358 ~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 358 KYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRF-SDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp HHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG-CSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred cCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccC-CCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 99999999999999999999999999999999987543 478999999999999433 48999999999999998754
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=2.3e-79 Score=653.84 Aligned_cols=419 Identities=16% Similarity=0.214 Sum_probs=365.6
Q ss_pred EEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh-hHHHHHHHHHH
Q 009407 70 SQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEH 148 (535)
Q Consensus 70 ~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~ 148 (535)
..++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+..+++. +....++.+..
T Consensus 4 ~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~ 83 (464)
T 3k9d_A 4 EDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYN 83 (464)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence 34566788999999999999999999999999999999999999999999999999999999988764 33333333333
Q ss_pred HHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHH----
Q 009407 149 SCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAE---- 224 (535)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~---- 224 (535)
+....+. .+. +. ...+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++
T Consensus 84 ~~~~~~~-~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 84 YIKDMKT-IGM-LK-EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHTTCCC-SEE-EE-EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred hhhcccc-cce-ec-cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 2221110 111 11 1245567889999999999999999999999999999999999999999999999987654
Q ss_pred HHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCC-CcceeeeCCCCCHHHH
Q 009407 225 LAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMG-AKNHGIVLPDANMDAT 302 (535)
Q Consensus 225 ~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelg-G~~p~iV~~dAdl~~A 302 (535)
++.++|+|+|+||+|+| +.+.++.|+.||+||+|+||||+.+ ++.+++++||+ +|+| ||+|+||++|||++.|
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~A 235 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRA 235 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHH
Confidence 56899999999999999 6789999999999999999999984 56677889999 7888 9999999999999999
Q ss_pred HHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHH-------hcccccCCC-CCCCCcCCCCCHHHHHHHHHHHH
Q 009407 303 LNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERA-------KALKVNAGT-EADADLGPVISKQAKERICRLIQ 373 (535)
Q Consensus 303 a~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~-------~~l~vG~p~-~~~~~~Gpli~~~~~~~~~~~i~ 373 (535)
++.+++++|+|+||.|++++||||+++ +|+|+++|+++. +++++|+|. ++++++||+++.++++++.++++
T Consensus 236 a~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~ 315 (464)
T 3k9d_A 236 VKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAG 315 (464)
T ss_dssp HHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhh
Confidence 999999999999999999999988877 899999999885 467889988 78899999999999999999999
Q ss_pred HHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH----HHHHcCCCCcEEE
Q 009407 374 SGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI----KIVNKNQYGNGAA 449 (535)
Q Consensus 374 ~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai----~~~N~~~~gLsa~ 449 (535)
.++.+|+++++||.. ++++++++. ||+||||++|++|+|+|||| +++|+++|||+++
T Consensus 316 ~a~~~ga~vl~gg~~------------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~ 376 (464)
T 3k9d_A 316 LTVPADARVLIAEET------------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLI 376 (464)
T ss_dssp CCCCTTCCEEEEECC------------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hhhcCCCEEEEcCCC------------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEE
Confidence 988899999998742 466778764 89999999999999999997 7999999999999
Q ss_pred EecCCHHHHHHHHhhcceeEEEEcCCCC--------CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEeccC
Q 009407 450 IFTSSGAAARKFQTEIEAGQVGINVPIP--------VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518 (535)
Q Consensus 450 V~t~d~~~a~~~~~~l~~G~V~iN~~~~--------~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~~ 518 (535)
|||+|.++++++++++++|+|+||+++. ...+.+|||| +.+|.| +++|..|+++|++.|+|.....
T Consensus 377 i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g--~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 377 IHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGS--SSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp EECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTC--SCCSBCCGGGSEEEEEEEECCC
T ss_pred EEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCC--cCCCCCCHHHheEEEEEEecCC
Confidence 9999999999999999999999999853 2457899998 567766 6789999999999999987553
No 49
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=4.9e-79 Score=650.07 Aligned_cols=394 Identities=16% Similarity=0.136 Sum_probs=319.9
Q ss_pred HHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCh----HHhh-hhHHH-HHHHHHHHHhh
Q 009407 79 EFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTL----KDAQ-GDVFR-GLEVVEHSCGM 152 (535)
Q Consensus 79 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~-~ev~~-~~~~l~~~~~~ 152 (535)
.+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||. .++. .|+.. ++..++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 378999999999999999999999999999999999999999999999999998 7874 78888 88888888876
Q ss_pred HHHhc------CccccCC--CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHH
Q 009407 153 ATLQM------GEYVPNV--SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAE 224 (535)
Q Consensus 153 ~~~~~------~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~ 224 (535)
.+... ++..+.. ..+...++.++|+|||++|+||| | .++++++++||++||+||+|||+.+|.++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 65543 3322211 12455788999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHH----H----cCCCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCC
Q 009407 225 LAM----E----AGLPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP 295 (535)
Q Consensus 225 ~l~----~----aGlP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~ 295 (535)
++. + +|+|+|++|+|+ +. ++++.|+.||+||+|+||||+.+|+.|++.+ ++|+++|||||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 8 999999999999 65 6788999999999999999999999999877 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCCccCcceEEEeCChhHHHHHHHHHHhcccc---cCCCCCCCCcCCCCCHHHHHHHHHH-
Q 009407 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKV---NAGTEADADLGPVISKQAKERICRL- 371 (535)
Q Consensus 296 dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~v---G~p~~~~~~~Gpli~~~~~~~~~~~- 371 (535)
|||+|.|++.+++++|.|+| .|++++||||+++.|+|+++|.++++++++ |+|.+ .++
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~id~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~ 310 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETLLINPKFSKWWEVLENLTLEGGVTIHATKDL-----------------KTAY 310 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHHCCCBEECHHH-----------------HHHH
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCHHHHHHHHHHHHHhcCCeecCCHHH-----------------hccc
Confidence 99999999999999999999 999999997766578899999999999987 87643 445
Q ss_pred HHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEe
Q 009407 372 IQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451 (535)
Q Consensus 372 i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~ 451 (535)
|++++ ++++||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 311 i~~a~----~~~~gG~---------g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 373 (468)
T 1vlu_A 311 FDKLN----ELGKLTE---------A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIV 373 (468)
T ss_dssp HHHHH----HHTCCCH---------H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEE
T ss_pred ccccc----eeeccCC---------C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 66655 3566663 4 689987 78899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCcc-----CCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 452 TSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFT-----GSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 452 t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfG-----G~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
|+|.++++++++++++|+|+||++... .+.+||| |+|.||+| ++ |++|+++|++.|+|+.+.
T Consensus 374 t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~pfG~Gg~~G~~~SG~g--~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 374 TENKANAEKFMKGVDSSGVYWNASTRF-ADGFRYGFGAEVGISTSKIH--AR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp CSCHHHHHHHHHHCCCSEEEESSCGGG-CC-------------------------CCSGGGEEEEEEEECS
T ss_pred eCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCCCCCCCCcceecCCCC--CC-cchHHHHhcceEEEEECC
Confidence 999999999999999999999987543 4678999 99999999 56 999999999999998753
No 50
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=5.8e-77 Score=628.53 Aligned_cols=388 Identities=16% Similarity=0.196 Sum_probs=340.0
Q ss_pred CHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCh----HHhh--------hhHHHHH
Q 009407 76 TNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTL----KDAQ--------GDVFRGL 143 (535)
Q Consensus 76 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~ 143 (535)
..+++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+. .++. .|+..++
T Consensus 12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~ 91 (427)
T 1o20_A 12 HMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI 91 (427)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence 345799999999999999999999999999999999999999999999999999986 4553 5899999
Q ss_pred HHHHHHHhhHHHhcCccccCC--CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHH
Q 009407 144 EVVEHSCGMATLQMGEYVPNV--SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221 (535)
Q Consensus 144 ~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~ 221 (535)
+.+++++.+.+. .+...+.. ..+...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|.++..
T Consensus 92 ~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 92 KACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 999999876553 33332211 23455688999999999999886 47899999999999999999999999999999
Q ss_pred HHHHHH----HcCCCcCceecccC-Ch-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCC
Q 009407 222 LAELAM----EAGLPDGVLNIVHG-TH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP 295 (535)
Q Consensus 222 l~~~l~----~aGlP~g~v~vv~g-~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~ 295 (535)
+++++. ++|+|+|++|+|+| +. +.++.|..||+||+|+||||+.+|+.|++.+ .+|+++|||||||+||++
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~ 245 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDE 245 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeC
Confidence 999997 68999999999998 54 4678888899999999999999999999887 599999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 009407 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQS 374 (535)
Q Consensus 296 dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~ 374 (535)
|||+|.|++.+++++|.|+| .|++++||||+++ +|+|+++|++++++++++
T Consensus 246 dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------------- 297 (427)
T 1o20_A 246 SADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE--------------------------- 297 (427)
T ss_dssp TSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE---------------------------
T ss_pred CCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe---------------------------
Confidence 99999999999999999999 9999999988877 899999999999987642
Q ss_pred HHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCC
Q 009407 375 GIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454 (535)
Q Consensus 375 a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d 454 (535)
+.||... .+ |+ ||| +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 298 --------~~gg~~~------~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 358 (427)
T 1o20_A 298 --------VRGCEKT------RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTEN 358 (427)
T ss_dssp --------EEECHHH------HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSC
T ss_pred --------eecChhh------hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCC
Confidence 2233211 12 33 885 34578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCC--CCcchHHHHHhchheeEEEecc
Q 009407 455 GAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGD--LNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 455 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~--~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
.++++++++++++|+|+||++.. ..+.+||||.|.||+|. .+++|++|+++||+.|+|+.++
T Consensus 359 ~~~a~~~~~~l~~G~V~iN~~~~-~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 359 YSNAKKFVSEIDAAAVYVNASTR-FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHHHCCSSEEEESSCGG-GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHHHhCCccEEEECCCCc-cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99999999999999999998754 34678999999999973 3467999999999999998765
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=1.4e-76 Score=628.51 Aligned_cols=389 Identities=19% Similarity=0.210 Sum_probs=330.1
Q ss_pred HHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChH----Hhh--------hhHHHHHH
Q 009407 77 NEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLK----DAQ--------GDVFRGLE 144 (535)
Q Consensus 77 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~--------~ev~~~~~ 144 (535)
.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+.. +++ .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999853 544 37888999
Q ss_pred HHHHHHhhHHHhcCccccC--CCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHH
Q 009407 145 VVEHSCGMATLQMGEYVPN--VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222 (535)
Q Consensus 145 ~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l 222 (535)
.+++++.+.+. .+...+. ...+...+++++|+|||++|+||| | +++++++++||++||+||+|||+.+|.++..+
T Consensus 105 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDP-IGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhccc-cCccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 99998876543 2333331 124567788999999999999998 8 68899999999999999999999999999999
Q ss_pred HHHH----HHcCCCcCceecccC-Ch-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCC
Q 009407 223 AELA----MEAGLPDGVLNIVHG-TH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPD 296 (535)
Q Consensus 223 ~~~l----~~aGlP~g~v~vv~g-~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~d 296 (535)
++++ .++|+|+|++|+|+| +. +.++.|..||+||.|+||||+.+|+.|++.+ ++|+++|||||||+||++|
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~d 258 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDR 258 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCC
Confidence 9997 799999999999998 54 4678888899999999999999999998876 6999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccc---cCCCCCCCCcCCCCCHHHHHHHHHHH
Q 009407 297 ANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKV---NAGTEADADLGPVISKQAKERICRLI 372 (535)
Q Consensus 297 Adl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~v---G~p~~~~~~~Gpli~~~~~~~~~~~i 372 (535)
||+|.|++.+++++|.|+| .|++++||||+++ +|+|+++|+++++++++ |+|.+ .++|
T Consensus 259 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~-----------------~~~i 320 (444)
T 4ghk_A 259 ASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADA-----------------RAVL 320 (444)
T ss_dssp CCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHHH-----------------HHHH
T ss_pred CCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHHH-----------------HHHH
Confidence 9999999999999999999 9999999988888 89999999999999988 76531 3556
Q ss_pred HHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEec
Q 009407 373 QSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452 (535)
Q Consensus 373 ~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t 452 (535)
+++. .| ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 321 ~~a~-------------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t 373 (444)
T 4ghk_A 321 EAAG-------------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVT 373 (444)
T ss_dssp HHTT-------------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEEC
T ss_pred Hhcc-------------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEe
Confidence 5432 12 11 345789999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCC--CCcchHHHHHhchheeEEEecc
Q 009407 453 SSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGD--LNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 453 ~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~--~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
+|.++++++++++++|+|+||+++.+ .+.+||||.+.||+|. .+++|++|+++||+.|+|++..
T Consensus 374 ~d~~~a~~~a~~l~aG~V~vN~~~~~-~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 374 EDHDRAMRFLREVDSASVMVNASTRF-ADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp SBHHHHHHHHHHCCSSEEEEEECGGG-CSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CCHHHHHHHHHhCCcceEEEcCCCcc-CCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 99999999999999999999998644 4689999999999873 3578999999999999998754
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.1e-75 Score=621.28 Aligned_cols=415 Identities=16% Similarity=0.245 Sum_probs=339.9
Q ss_pred ecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh-hHHHHHHHH-HHH
Q 009407 72 LPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVV-EHS 149 (535)
Q Consensus 72 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l-~~~ 149 (535)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++. ++..+++.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999999999999875 666666655 333
Q ss_pred HhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHH--
Q 009407 150 CGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAM-- 227 (535)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~-- 227 (535)
... ...+ .++ ...+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 81 ~~~--~~~g-~~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KDE--QTCG-ILE-EDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TTC--CCSE-EC--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhc--cccc-ccc-CCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 221 1111 111 2234456889999999999999999999999999999999999999999999999998888875
Q ss_pred --HcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHH
Q 009407 228 --EAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLN 304 (535)
Q Consensus 228 --~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~ 304 (535)
++|+|+|++|+|+| +.+.+++|+.||+|++|+||||+.++ +.+++++||+++|+|||||+||++|||+|.|++
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~ 232 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKRAVA 232 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHHHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHH
Confidence 79999999999999 67899999999999999999999864 456778999999999999999999999999999
Q ss_pred HHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEE
Q 009407 305 ALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLL 383 (535)
Q Consensus 305 ~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~ 383 (535)
.+++++|+|+||.|+++++|||+++ +|+|+++|+++ +||++++.+++++.++|+++...|+++
T Consensus 233 ~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v- 296 (452)
T 3my7_A 233 SVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI- 296 (452)
T ss_dssp HHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-
T ss_pred HHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-
Confidence 9999999999999999999988888 89999999864 499999999999999998766677776
Q ss_pred eccccccCCCCCCCceeccEE-------EecCCCCcccccccccccceEEeecCCHHHHHHHHHcCC----CCcEEEEec
Q 009407 384 LDGRNIVVPGYEHGNFIGPTI-------LTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ----YGNGAAIFT 452 (535)
Q Consensus 384 ~gg~~~~~~~~~~g~~~~Ptv-------l~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~----~gLsa~V~t 452 (535)
+||...... ...|+|++||+ +.++++++++.+ |+||||++|++|+|+||||+++|++. |||+++|||
T Consensus 297 ~G~~~~~~~-~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t 374 (452)
T 3my7_A 297 VGQPATAIA-EMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYT 374 (452)
T ss_dssp TTCCHHHHH-HHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEES
T ss_pred ecCccchhH-HhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEc
Confidence 466432100 02589999997 678999999875 89999999999999999999999985 999999999
Q ss_pred CCHHHHHH---HHhhcceeEEEEcCCCCCCC----------CCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 453 SSGAAARK---FQTEIEAGQVGINVPIPVPL----------PFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 453 ~d~~~a~~---~~~~l~~G~V~iN~~~~~~~----------~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
+|.+++++ +++++++|+|+||+++.+.. +.+.+| .+ .+|+....+.-+.+++.+.|+|..
T Consensus 375 ~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~g-~g--~~Gg~~~~~nv~~~~l~n~~~v~~ 447 (452)
T 3my7_A 375 NQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLG-CG--SWGGNSISENVGPKHLINKKTVAK 447 (452)
T ss_dssp CTTTCHHHHHHHHHHCCCSEEEESCCCC-------------------------------CCCCCGGGGEEEEEEEC
T ss_pred CCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEeee-cc--ccCCCccCCCCChhHeeeeeEEEe
Confidence 99887777 99999999999999754320 111111 00 123333445566899999998865
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.83 E-value=0.035 Score=56.52 Aligned_cols=333 Identities=15% Similarity=0.139 Sum_probs=174.2
Q ss_pred hccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCC-C------hHHhhhhHHHHH--------HHHHHHHhhHH---
Q 009407 93 SWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGK-T------LKDAQGDVFRGL--------EVVEHSCGMAT--- 154 (535)
Q Consensus 93 ~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk-~------~~~a~~ev~~~~--------~~l~~~~~~~~--- 154 (535)
.|+..+..+-.+..+.+.+.++++.|+-+...++..-+ . +.-...|+..+. +.|+.++...+
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~~~I~~fh 105 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAAERIRAYA 105 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 35555566666667777777777766655544443321 1 111112222221 12222222211
Q ss_pred -HhcCc-cccCCCCCceeeeeeccCceEEeecCCC---cchhhHhhhhhhhhhcCCe--eeecCCCCChHHHHHHHHHHH
Q 009407 155 -LQMGE-YVPNVSNGIDTYSLREPLGVCAGICPFN---FPAMIPLWMFPVAVTCGNT--FVLKPSEKDPGASIMLAELAM 227 (535)
Q Consensus 155 -~~~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~N---~P~~~~~~~l~~ALaaGN~--VVlKps~~~~~~~~~l~~~l~ 227 (535)
..... ..-...+|.....++.|+--|++..|.- ||... +...+||-.+|+. |+.-|.+. -...-.+.-...
T Consensus 106 ~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~AA~ 183 (423)
T 4gic_A 106 ERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPR-GELNALVLAAAY 183 (423)
T ss_dssp HHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGG-GCCCHHHHHHHH
T ss_pred HhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCC-CCccHHHHHHHH
Confidence 11111 1111345666778899999999999954 66444 4457899999986 33344432 111222333345
Q ss_pred HcCCCcCceecccCChhHHHHHHh----CCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeC-CCcceeee--CCCCCHH
Q 009407 228 EAGLPDGVLNIVHGTHDTVNAICD----DANIRAISFVGSNVAGMHIYARASAKGKRVQSNM-GAKNHGIV--LPDANMD 300 (535)
Q Consensus 228 ~aGlP~g~v~vv~g~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lel-gG~~p~iV--~~dAdl~ 300 (535)
.+|+.+ |--+ |+.+...+|.- -|.||.|+=.|..-+..+=.... ..|-..+ .|.+=++| +++||.+
T Consensus 184 l~Gv~e--Iy~v-GGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~----g~VgIDm~AGPSEilViAD~~a~p~ 256 (423)
T 4gic_A 184 ISGVDR--VFRI-GGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF----GQVGIDMVAGPSEILVISDGRTDPD 256 (423)
T ss_dssp HHTCCE--EECC-CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB----TTBEECCCCCCCEEEEEECSCSCHH
T ss_pred hcCCcE--EEEc-CChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc----CCcCcccccccceEEEEeCCCCCHH
Confidence 667654 2222 34454555653 57899999999887654322221 1233333 35444444 4458999
Q ss_pred HHHHHHHHHHhhccCCCccCcceEEEeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCC
Q 009407 301 ATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGA 380 (535)
Q Consensus 301 ~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga 380 (535)
..+..++.-+=+... +. .+++..+ .+|.+++.+++.+.--.-| .. +.++.+..
T Consensus 257 ~vAaDLlsQAEHd~~----a~-~iLvT~s-~~la~~V~~~i~~~l~~l~-----------r~-------~i~~~sl~--- 309 (423)
T 4gic_A 257 WIAMDLFSQAEHDED----AQ-AILISPD-AAHLEAVQASIERLLPGME-----------RA-------EVIRTSLE--- 309 (423)
T ss_dssp HHHHHHHHHHTTCTT----CE-EEEEESC-HHHHHHHHHHHHHHGGGCT-----------TH-------HHHHHHHH---
T ss_pred HHHHHHHHhhccCCC----Ce-EEEEeCc-HHHHHHHHHHHHHHHhhCc-----------cH-------HHHHHHHh---
Confidence 988888766554332 22 3445444 4556655555542110000 00 11111111
Q ss_pred EEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHH
Q 009407 381 RLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARK 460 (535)
Q Consensus 381 ~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~ 460 (535)
-+| .++.++|++|+++++|..-.- -.-|.++|+. .
T Consensus 310 --------------------------------------~~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~ 344 (423)
T 4gic_A 310 --------------------------------------RRG---GMILVDDLEQAAAVANRIAPE-HLELSVESPE---V 344 (423)
T ss_dssp --------------------------------------HHC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---H
T ss_pred --------------------------------------cCc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---H
Confidence 011 356688999999999996444 3677889965 5
Q ss_pred HHhhcc-eeEEEEcCCCC--------CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 461 FQTEIE-AGQVGINVPIP--------VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 461 ~~~~l~-~G~V~iN~~~~--------~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
+..+++ +|.|++..+++ ..++-+|-+|.- ++.+..++..|+...++
T Consensus 345 ~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G~A-------r~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 345 LVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTSGTA-------RFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp HGGGCCCCSEEEEC----------------CCCCTTGG-------GTCCCCCGGGGEEEEEE
T ss_pred HHhhCcEeceeecCCCCchhhhhcCcCCCccCCCCCcc-------cccCCCCHHHeeeeeeE
Confidence 777776 89999976542 123457776643 22333347888876554
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=97.04 E-value=0.35 Score=49.30 Aligned_cols=259 Identities=14% Similarity=0.098 Sum_probs=150.4
Q ss_pred CceeeeeeccCceEEeecCC---CcchhhHhhhhhhhhhcCCeeeec--CCCCChHHHHHHHHHHHHcCCCcCceecccC
Q 009407 167 GIDTYSLREPLGVCAGICPF---NFPAMIPLWMFPVAVTCGNTFVLK--PSEKDPGASIMLAELAMEAGLPDGVLNIVHG 241 (535)
Q Consensus 167 ~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~l~~ALaaGN~VVlK--ps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g 241 (535)
|.....++.|+--|++..|. -||.. ++...+||-.+|+.=|+- |....|. +.-....+|+.+ |--+ |
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~i~p~----iL~AA~l~Gv~e--Iy~v-G 185 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQD--VFNV-G 185 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTHH-HHHHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCCE--EEEC-C
T ss_pred CcEEEEEEeehheEEEEecCCCCCchhH-HHHhhccHhhcCCCeEEEECCCCCCHH----HHHHHHHcCCCE--Eeec-c
Confidence 66677788999999999997 46644 444578999999876544 4322222 223335667664 2222 4
Q ss_pred ChhHHHHHHh----CCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeC-CCcceeee--CCCCCHHHHHHHHHHHHhhcc
Q 009407 242 THDTVNAICD----DANIRAISFVGSNVAGMHIYARASAKGKRVQSNM-GAKNHGIV--LPDANMDATLNALAAAGFGAA 314 (535)
Q Consensus 242 ~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lel-gG~~p~iV--~~dAdl~~Aa~~iv~~~~~~~ 314 (535)
+.+...+|.- -|.||.|+=.|..-+..+=..-... ...|-..+ .|.+=++| +++||.+..+..++.-+=+..
T Consensus 186 GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~-~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~ 264 (434)
T 1kae_A 186 GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQR-LDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGP 264 (434)
T ss_dssp HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHC-TTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCT
T ss_pred cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhh-cCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 4444455552 4889999988887654322211111 12233333 35554444 445899988888776655433
Q ss_pred CCCccCcceEEEeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCC
Q 009407 315 GQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY 394 (535)
Q Consensus 315 GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~ 394 (535)
.+. .+++..+ +++.+++.+++++.--.-| . .+.++
T Consensus 265 ----~a~-aiLvT~s-~~la~~V~~ev~~ql~~lp-----------r-------~~ia~--------------------- 299 (434)
T 1kae_A 265 ----DSQ-VILLTPA-ADMARRVAEAVERQLAELP-----------R-------AETAR--------------------- 299 (434)
T ss_dssp ----TCE-EEEEESC-HHHHHHHHHHHHHHHTTCT-----------T-------HHHHH---------------------
T ss_pred ----CCc-EEEEECC-HHHHHHHHHHHHHHHHhCC-----------h-------HHHHH---------------------
Confidence 232 3444443 4455555554432110000 0 00111
Q ss_pred CCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEEc
Q 009407 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE-AGQVGIN 473 (535)
Q Consensus 395 ~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~-~G~V~iN 473 (535)
+.+..- .++-++|++||++++|..-.= -.-|.++|+. .+..+++ +|.|++.
T Consensus 300 -----------------------~sl~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG 351 (434)
T 1kae_A 300 -----------------------QALNAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLG 351 (434)
T ss_dssp -----------------------HHHTTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEES
T ss_pred -----------------------HHHHcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcC
Confidence 111122 467789999999999996544 3678899964 6677776 8999998
Q ss_pred CCCC--------CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 474 VPIP--------VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 474 ~~~~--------~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
.+++ ..++-+|-+|.- ++.|..+++.|+...++.
T Consensus 352 ~~tpe~~GDY~aG~NHvLPT~G~A-------R~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 352 DWSPESAGDYASGTNHVLPTYGYT-------ATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp TTCCHHHHHHTSSSCCCCCCTTGG-------GTCCCSCGGGGEEEEEEE
T ss_pred CCCchhhcccccCCCcccCCCCce-------eccCCCcHHhccceeeEE
Confidence 7643 235568877654 223334478888766553
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=71.66 E-value=8.7 Score=30.76 Aligned_cols=60 Identities=18% Similarity=0.235 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHHHHHH-HcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHH
Q 009407 361 SKQAKERICRLIQSGI-ESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIV 439 (535)
Q Consensus 361 ~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~ 439 (535)
+++.+++..+....++ +.|++++..|.. |.++.+.. .+-+.|+.|+|.++|.++.
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~-------------~~~~eG~~-----------~~~~viieFpS~~aa~~~~ 71 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS-------------VTELEGTA-----------RARNVVIEFPSVQHAIDCY 71 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC-------------EEEEESCC-----------CSEEEEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC-------------ceEEecCC-----------cCeEEEEECCCHHHHHHHH
Confidence 4444444444444443 348888876542 45554321 1366799999999999999
Q ss_pred HcCCC
Q 009407 440 NKNQY 444 (535)
Q Consensus 440 N~~~~ 444 (535)
|+-+|
T Consensus 72 ~s~~Y 76 (99)
T 2fiu_A 72 NSPEY 76 (99)
T ss_dssp HSHHH
T ss_pred cCHHH
Confidence 87554
No 56
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=66.81 E-value=14 Score=32.23 Aligned_cols=114 Identities=10% Similarity=0.012 Sum_probs=76.4
Q ss_pred ceEEeecCCCc-chhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHH-cCCCcCceecccC-ChhHHHHHHhCCC
Q 009407 178 GVCAGICPFNF-PAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAME-AGLPDGVLNIVHG-THDTVNAICDDAN 254 (535)
Q Consensus 178 GVv~~I~p~N~-P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~-aGlP~g~v~vv~g-~~~~~~~L~~~~~ 254 (535)
|.|+++..-+- +-...+.+-...++.|..++-= ..|+ +.|++ .|+|-..++-++. +......+..+..
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~ge 82 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTG----NLISRATGMNVNAMLSGPMGGDQQVGALISEGK 82 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHH----HHHHHHHCCCCEEECCGGGTHHHHHHHHHHTTC
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHH----HHHHHHhCceeEEEEecCCCCCchHHHHHHCCC
Confidence 76666655443 4455555556677778887753 3344 44555 7999877765553 3333344555567
Q ss_pred cCEEEEeCC-------hHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccC
Q 009407 255 IRAISFVGS-------NVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAG 315 (535)
Q Consensus 255 v~~V~ftGs-------~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~G 315 (535)
|++|+||=+ ...+..|.+.|..+..|+.-.+. .++.++.+.+++..
T Consensus 83 IdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~la---------------tA~a~v~ai~~~~~ 135 (152)
T 1b93_A 83 IDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVA---------------TADFIIQSPHFNDA 135 (152)
T ss_dssp CCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSHH---------------HHHHHHTSGGGGSC
T ss_pred ccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCHH---------------HHHHHHHHHhcccc
Confidence 999999876 56788999999998888876553 46677777777664
No 57
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=66.29 E-value=4.3 Score=34.61 Aligned_cols=81 Identities=16% Similarity=0.080 Sum_probs=52.8
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHH-cCCCcCceeccc-CChhHHHHHHhCCCcCEEEEeCC-------hHH
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAME-AGLPDGVLNIVH-GTHDTVNAICDDANIRAISFVGS-------NVA 266 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~-aGlP~g~v~vv~-g~~~~~~~L~~~~~v~~V~ftGs-------~~~ 266 (535)
+-...++.|..++- |..|+. .|++ .|++-..++-++ ++......++.+.+|++|+||=+ ...
T Consensus 23 ~~~~~ll~Gf~l~A-----T~gTa~----~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVInt~~pl~~~~h~~D 93 (134)
T 2xw6_A 23 QRHREVLARFPLVA-----TGTTGR----RIEEATGLTVEKLLSGPLGGDQQMGARVAEGRILAVIFFRDPLTAQPHEPD 93 (134)
T ss_dssp HHTHHHHTTSCEEE-----CHHHHH----HHHHHHCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEEECCTTTCCTTSCC
T ss_pred HHHHHHhCCCEEEE-----ccHHHH----HHHHhhCceEEEEEecCCCCcchHHHHHHCCCccEEEEccCcccCCCccch
Confidence 33345555665553 344544 4445 799988887776 54333344555567999999977 335
Q ss_pred HHHHHHHHhcCCCeEEEeC
Q 009407 267 GMHIYARASAKGKRVQSNM 285 (535)
Q Consensus 267 g~~i~~~a~~~~~~v~lel 285 (535)
+..|.+.|..+..|+.-.+
T Consensus 94 ~~~IrR~A~~~~IP~~T~l 112 (134)
T 2xw6_A 94 VQALLRVCDVHGVPLATNP 112 (134)
T ss_dssp SHHHHHHHHHHTCCEECSH
T ss_pred HHHHHHHHHHcCCCeEcCH
Confidence 6788999888888887654
No 58
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=56.03 E-value=16 Score=31.24 Aligned_cols=62 Identities=13% Similarity=0.107 Sum_probs=46.0
Q ss_pred HHHHHHcCCCcCceecccCC------hhHHHHHHhCCCcCEEEEeCCh-----HHHHHHHHHHhcCCCeEEEeC
Q 009407 223 AELAMEAGLPDGVLNIVHGT------HDTVNAICDDANIRAISFVGSN-----VAGMHIYARASAKGKRVQSNM 285 (535)
Q Consensus 223 ~~~l~~aGlP~g~v~vv~g~------~~~~~~L~~~~~v~~V~ftGs~-----~~g~~i~~~a~~~~~~v~lel 285 (535)
++.|++.|+|-..++-++.+ ....+. ..+..|++|++|-+. ..+..|.+.|-.+..|++..+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~-i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKL-IRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHH-HHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHH-HHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 45567899998888877643 334444 455679999998655 478889999999999988655
No 59
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=55.83 E-value=20 Score=28.22 Aligned_cols=60 Identities=13% Similarity=0.171 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHHHHHHc-CCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHH
Q 009407 361 SKQAKERICRLIQSGIES-GARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIV 439 (535)
Q Consensus 361 ~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~ 439 (535)
+++.+++..+....++++ |++++..| . +.++.+-. . ...+.|+.|+|.+.|.++.
T Consensus 15 d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~-------------~~~lEG~~---------~-~~~~viieFps~~aa~a~y 70 (94)
T 3lo3_A 15 DAEKLQQYGARVASTLAKYSGEVLVKG-S-------------VEQLHGKF---------E-HKAQVILEFPSREDAYNWY 70 (94)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEE-E-------------CEEEESCC---------C-CSEEEEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEc-c-------------cccccCCC---------C-CCeEEEEECCCHHHHHHHH
Confidence 445555555555544443 78887655 3 33444321 0 2466899999999999999
Q ss_pred HcCCC
Q 009407 440 NKNQY 444 (535)
Q Consensus 440 N~~~~ 444 (535)
|+.+|
T Consensus 71 ~SpeY 75 (94)
T 3lo3_A 71 HSEEY 75 (94)
T ss_dssp HSHHH
T ss_pred CCHHH
Confidence 98655
No 60
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=53.16 E-value=1e+02 Score=30.32 Aligned_cols=125 Identities=14% Similarity=0.042 Sum_probs=72.0
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceeccc-C-C-------hhHHHHHHhCCCcCEEEEe---CChHHHH
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVH-G-T-------HDTVNAICDDANIRAISFV---GSNVAGM 268 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~-g-~-------~~~~~~L~~~~~v~~V~ft---Gs~~~g~ 268 (535)
...|+.-++-=| -..+..+...+.+.|+.-. .+|. | + .+..+.|.++|+.+.|..- |+..- +
T Consensus 166 ~~~G~vgivSqS---G~l~~~i~~~~~~~g~G~S--~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e-~ 239 (334)
T 3mwd_B 166 YRPGSVAYVSRS---GGMSNELNNIISRTTDGVY--EGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEE-Y 239 (334)
T ss_dssp TSCCSEEEEESC---HHHHHHHHHHHHHHSSCEE--EEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHH-H
T ss_pred CCCCCEEEEeCc---hHHHHHHHHHHHhcCCCeE--EEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHH-H
Confidence 456887777433 3445556666667777532 2232 2 2 2567889999999999874 55655 5
Q ss_pred HHHHHHhc--CCCeEEEeCCCccee-------------eeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCChhHH
Q 009407 269 HIYARASA--KGKRVQSNMGAKNHG-------------IVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSW 333 (535)
Q Consensus 269 ~i~~~a~~--~~~~v~lelgG~~p~-------------iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~~d~f 333 (535)
..++.+.+ +.||++.--.|.+.. ++..|.. -..+..++|..+| +++++..+++
T Consensus 240 ~~~~~~r~~~~~KPVV~~kaGrs~~~~g~~aa~sHtGalag~~~~----~a~~~~aa~~~aG--------v~~v~~~~el 307 (334)
T 3mwd_B 240 KICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASE----TAVAKNQALKEAG--------VFVPRSFDEL 307 (334)
T ss_dssp HHHHHHHTTSCCSCEEEEEECTTCC----------------CGGG----SHHHHHHHHHHTT--------CBCCSSGGGH
T ss_pred HHHHHHHhhcCCCCEEEEEcCCCcccccccccccchhhhccCCCc----cHHHHHHHHHHcC--------CeEcCCHHHH
Confidence 56665553 579998877776654 2222210 1124455566666 4345555666
Q ss_pred HHHHHHHHhc
Q 009407 334 EDKLVERAKA 343 (535)
Q Consensus 334 ~~~l~~~~~~ 343 (535)
.+.+.+.+++
T Consensus 308 ~~~~~~~~~~ 317 (334)
T 3mwd_B 308 GEIIQSVYED 317 (334)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666555544
No 61
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=51.36 E-value=17 Score=32.43 Aligned_cols=120 Identities=13% Similarity=0.026 Sum_probs=79.9
Q ss_pred eeeccC-ceEEeecCCCc-chhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHH-cCCCcCceecccC-ChhHHH
Q 009407 172 SLREPL-GVCAGICPFNF-PAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAME-AGLPDGVLNIVHG-THDTVN 247 (535)
Q Consensus 172 ~~~~P~-GVv~~I~p~N~-P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~-aGlP~g~v~vv~g-~~~~~~ 247 (535)
...-|. |.|+++..-+- +-...+.+-...++.|..++- |..|+. .|.+ .|+|-..++-++. +.....
T Consensus 21 ~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~----~L~e~~Gl~v~~v~k~~eGG~pqI~ 91 (178)
T 1vmd_A 21 KIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGA----LLQEKLGLKVHRLKSGPLGGDQQIG 91 (178)
T ss_dssp EEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHH----HHHHHHCCCCEECSCGGGTHHHHHH
T ss_pred eeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHH----HHHHHhCceeEEEeecCCCCCchHH
Confidence 334443 87777766544 555555556667778888775 445554 4445 7999777765543 333334
Q ss_pred HHHhCCCcCEEEEeCC-------hHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccC
Q 009407 248 AICDDANIRAISFVGS-------NVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAG 315 (535)
Q Consensus 248 ~L~~~~~v~~V~ftGs-------~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~G 315 (535)
.++....|++|+||=+ ...+..|.+.|..+.+|+.-.+. .++.++.+.+++..
T Consensus 92 d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnla---------------tA~A~v~ail~~~~ 151 (178)
T 1vmd_A 92 AMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITRS---------------TADFLISSPLMNDV 151 (178)
T ss_dssp HHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSHH---------------HHHHHHHSGGGGSC
T ss_pred HHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCHH---------------HHHHHHHHHhcccc
Confidence 4555567999999876 34678899999998888876553 46777888777764
No 62
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=51.31 E-value=8.2 Score=35.96 Aligned_cols=65 Identities=15% Similarity=0.144 Sum_probs=45.6
Q ss_pred hhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChH
Q 009407 194 LWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNV 265 (535)
Q Consensus 194 ~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~ 265 (535)
+..++..+.+||-||++.+. +.....+..+|... +|.|.+++++.+.+- ...-..+.+.++.+..
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s~~Y----~~~~~cnilgls~~v~ 85 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYSSQY----EEAYRCNFLGLSPHVQ 85 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEESSC----CCTTTCSEEEECTTCC
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccchhh----cchhheeeecCCCCcc
Confidence 45677889999999999875 55666677778887 999999999764321 1122345666666544
No 63
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=47.07 E-value=31 Score=29.54 Aligned_cols=66 Identities=14% Similarity=0.158 Sum_probs=43.0
Q ss_pred CCCCHHHHHHHHHHHHHHHH-cCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH
Q 009407 358 PVISKQAKERICRLIQSGIE-SGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI 436 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai 436 (535)
++.+++.+++..+....++. -|++++..|.. +.++.+-.. |.+ .-+.|+.|+|.+.|+
T Consensus 44 ~vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~-------------~~~lEG~~~-------e~~-~~~viieFPS~~aa~ 102 (143)
T 3hhl_A 44 ETTGAEAYAAYGRDSGPVSERLGGXVVWQGQF-------------ELMLIGPQD-------EHW-DHVFIAEYPSVAAFV 102 (143)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE-------------EEEEESCTT-------CCC-SEEEEEEESCHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEeecCC-------------ceeEECCCC-------CCC-CeEEEEECCCHHHHH
Confidence 35666777666666655554 48888876542 234444221 111 456799999999999
Q ss_pred HHHHcCCC
Q 009407 437 KIVNKNQY 444 (535)
Q Consensus 437 ~~~N~~~~ 444 (535)
++.|+-.|
T Consensus 103 a~y~SpeY 110 (143)
T 3hhl_A 103 EMIRDPVY 110 (143)
T ss_dssp HHHHCHHH
T ss_pred HHHcCHHH
Confidence 99887665
No 64
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=38.73 E-value=3.2e+02 Score=27.51 Aligned_cols=133 Identities=11% Similarity=0.059 Sum_probs=75.9
Q ss_pred hhhhc-CCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 199 VAVTC-GNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 199 ~ALaa-GN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
++|.. .+.-|+--....+..+..+++.+.+.|+|. ..+..++.+..+.|++++++|.|+.+-.+..-..+...+.+.
T Consensus 37 ~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~--~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al~a 114 (444)
T 2ixa_A 37 ENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKP--AKVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAMKA 114 (444)
T ss_dssp HHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCC--CEEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHHHHHHT
T ss_pred HHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCC--CceeccCCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHC
Confidence 44443 343333334455666677777666777763 233332223456788888899999988888877788777777
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC--hhHHHHHHHHHHhcccccCC
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD--SKSWEDKLVERAKALKVNAG 349 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~--~d~f~~~l~~~~~~l~vG~p 349 (535)
+|.|++|= |+ ..+++.+.+ ++..+- ..|..| .+.+. ++.....+++.+++=.+|.+
T Consensus 115 GkhV~~EK----P~----a~~~~ea~~-l~~~a~-~~g~~~------~v~~~~r~~p~~~~~~~~i~~G~iG~i 172 (444)
T 2ixa_A 115 GKIVGMEV----SG----AITLEECWD-YVKVSE-QTGVPL------MALENVCYRRDVMAILNMVRKGMFGEL 172 (444)
T ss_dssp TCEEEECC----CC----CSSHHHHHH-HHHHHH-HHCCCE------EECCGGGGCHHHHHHHHHHHTTTTCSE
T ss_pred CCeEEEeC----CC----cCCHHHHHH-HHHHHH-HhCCeE------EEEeccccCHHHHHHHHHHHcCCCCCe
Confidence 88888773 22 135555433 333322 234332 22222 45556667776665444543
No 65
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=34.20 E-value=46 Score=31.59 Aligned_cols=88 Identities=14% Similarity=0.078 Sum_probs=55.4
Q ss_pred eeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC--CCeE-EE
Q 009407 207 FVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK--GKRV-QS 283 (535)
Q Consensus 207 VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~--~~~v-~l 283 (535)
+|.+|++.+......+.+.|.+.|+.- ....+|.|+.-|+..|-..+.+..... .+|+ -.
T Consensus 5 ii~n~~~~~~~~~~~l~~~l~~~g~~v-----------------~~~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGI 67 (272)
T 2i2c_A 5 ITSKGDEKSDLLRLNMIAGFGEYDMEY-----------------DDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGI 67 (272)
T ss_dssp EEECCSHHHHHHHHHHHHHHTTSSCEE-----------------CSSSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEE
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEe-----------------CCCCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEE
Confidence 455654333334445555566665431 134579999999999998888887654 6784 45
Q ss_pred eCCCcceeeeCCCCCHHHHHHHHHHHHh
Q 009407 284 NMGAKNHGIVLPDANMDATLNALAAAGF 311 (535)
Q Consensus 284 elgG~~p~iV~~dAdl~~Aa~~iv~~~~ 311 (535)
-+|-.+.+-=....|++.+++.++.+.+
T Consensus 68 n~G~lgfl~~~~~~~~~~~l~~l~~g~~ 95 (272)
T 2i2c_A 68 HTGHLGFYADWRPAEADKLVKLLAKGEY 95 (272)
T ss_dssp ESSSCCSSCCBCGGGHHHHHHHHHTTCC
T ss_pred eCCCCCcCCcCCHHHHHHHHHHHHcCCC
Confidence 6665442211224578899998887643
No 66
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=33.03 E-value=25 Score=29.62 Aligned_cols=48 Identities=15% Similarity=0.236 Sum_probs=32.6
Q ss_pred CceecccCChhHHH-HHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeE
Q 009407 234 GVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281 (535)
Q Consensus 234 g~v~vv~g~~~~~~-~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v 281 (535)
|.+++++|+.+... .+...+++.+|++||+...-..+.+.+.+...|+
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ipv 101 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGVPV 101 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCCE
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCeE
Confidence 56888878655332 2333256999999999887777887776654444
No 67
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=32.90 E-value=88 Score=25.88 Aligned_cols=74 Identities=14% Similarity=0.152 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceec-----cEEEecCCCCcccccccccccceEEeecCCHHHHHH
Q 009407 363 QAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIG-----PTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIK 437 (535)
Q Consensus 363 ~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~-----Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~ 437 (535)
+..+...+++++..+.| +++.|+. ...+ ..+..+. |+|..+ |-.. ..|..|=. .|+.++|.|||++
T Consensus 30 ~~~~~~~~~~~~l~~~G-~lv~g~~-L~~~--~~a~~Vr~~~g~~~VtdG--PfaE--tkE~lgG~-~iie~~s~deA~e 100 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAG-HYIASHA-LQSV--QTATTLRHQGGRLAMTDG--PFAE--TKEQLGGF-YLIEARDLNQALQ 100 (124)
T ss_dssp HHHHHHHHHHHHHHHHT-CEEEEEE-CCCG--GGCEEEEECSSCEEEEES--CSSC--CSSEEEEE-EEEEESSHHHHHH
T ss_pred HHHHHHHHHHHHHHHCC-EEEecCc-CCCC--cceEEEEecCCceeEecC--CCcC--CcccceeE-EEEEeCCHHHHHH
Confidence 34455666677666667 3444332 2110 1222222 333322 1111 34666554 4789999999999
Q ss_pred HHHcCCCC
Q 009407 438 IVNKNQYG 445 (535)
Q Consensus 438 ~~N~~~~g 445 (535)
++...++.
T Consensus 101 ~A~~~P~~ 108 (124)
T 1s7i_A 101 IAAKIPPG 108 (124)
T ss_dssp HHTTCGGG
T ss_pred HHHhCCcc
Confidence 99987664
No 68
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=31.79 E-value=1.2e+02 Score=29.38 Aligned_cols=105 Identities=12% Similarity=0.030 Sum_probs=60.7
Q ss_pred eeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCCh--hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh----cCCC
Q 009407 206 TFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTH--DTVNAICDDANIRAISFVGSNVAGMHIYARAS----AKGK 279 (535)
Q Consensus 206 ~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~--~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~----~~~~ 279 (535)
.+|++|..........+.+.|.++|+.-.+...-..+. +....+.. ...|.|+.-|+..|-..+..... ....
T Consensus 33 ~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~~~~~~~~~~~~~~~-~~~d~vvv~GGDGTl~~v~~~l~~~~~~~~~ 111 (332)
T 2bon_A 33 LLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARK-FGVATVIAGGGDGTINEVSTALIQCEGDDIP 111 (332)
T ss_dssp EEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECCSTTHHHHHHHHHHH-HTCSEEEEEESHHHHHHHHHHHHHCCSSCCC
T ss_pred EEEECCCCCCCchHHHHHHHHHHcCCcEEEEEecCcchHHHHHHHHHh-cCCCEEEEEccchHHHHHHHHHhhcccCCCC
Confidence 35566654333344556777787777532221111111 12222332 24689999999999999988887 4455
Q ss_pred eEE-EeCCCcc-eeeeCC-CCCHHHHHHHHHHHHh
Q 009407 280 RVQ-SNMGAKN-HGIVLP-DANMDATLNALAAAGF 311 (535)
Q Consensus 280 ~v~-lelgG~~-p~iV~~-dAdl~~Aa~~iv~~~~ 311 (535)
|+. +-+|--| .+--.. ..|++.+++.++.+.+
T Consensus 112 plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~g~~ 146 (332)
T 2bon_A 112 ALGILPLGTANDFATSVGIPEALDKALKLAIAGDA 146 (332)
T ss_dssp EEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEE
T ss_pred eEEEecCcCHHHHHHhcCCCCCHHHHHHHHHcCCe
Confidence 653 4455333 332222 4589999999887655
No 69
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=28.16 E-value=2.1e+02 Score=27.99 Aligned_cols=87 Identities=18% Similarity=0.117 Sum_probs=55.3
Q ss_pred HHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEE
Q 009407 246 VNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVV 325 (535)
Q Consensus 246 ~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vl 325 (535)
.+.|++++++|.|+....+..-..+...+.+.+|.|++|=.- ..+++.+- .++..+- ..|.. +.
T Consensus 80 ~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPl--------a~~~~ea~-~l~~~a~-~~g~~------l~ 143 (361)
T 3u3x_A 80 AEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPG--------MTSFDQLA-KLRRVQA-ETGRI------FS 143 (361)
T ss_dssp HHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCS--------CSSHHHHH-HHHHHHH-TTCCC------EE
T ss_pred HHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCC--------CCCHHHHH-HHHHHHH-HcCCE------EE
Confidence 466788889999999999999888888888888888777531 12455543 3443332 23322 22
Q ss_pred EeCC--hh-HHHHHHHHHHhcccccC
Q 009407 326 FVGD--SK-SWEDKLVERAKALKVNA 348 (535)
Q Consensus 326 v~~~--~d-~f~~~l~~~~~~l~vG~ 348 (535)
+-.. ++ ..+.++++.+++=.+|.
T Consensus 144 v~~~~R~~~p~~~~~k~~i~~g~iG~ 169 (361)
T 3u3x_A 144 ILYSEHFESPATVKAGELVAAGAIGE 169 (361)
T ss_dssp EECHHHHTCHHHHHHHHHHHTTTTSS
T ss_pred EechHhhCCHHHHHHHHHHHcCCCCC
Confidence 2222 44 66777887776544454
No 70
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=27.34 E-value=27 Score=31.04 Aligned_cols=56 Identities=13% Similarity=0.043 Sum_probs=37.4
Q ss_pred CCChHHHHHHHHHHHHcCCCcCceecccCChhHH-HHH---HhCCCcCEEEEeCChHHHH
Q 009407 213 EKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAI---CDDANIRAISFVGSNVAGM 268 (535)
Q Consensus 213 ~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~-~~L---~~~~~v~~V~ftGs~~~g~ 268 (535)
...-.....+++.+.+.|+..-...+++.+.+.. ++| .+..+.|.|+.||++..+.
T Consensus 36 ~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 36 PIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred eEeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 3444566788899999998765566676664432 333 3333479999999987654
No 71
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=26.55 E-value=18 Score=32.57 Aligned_cols=54 Identities=19% Similarity=0.211 Sum_probs=36.9
Q ss_pred ChHHHHHHHHHHHHcCCCcCceecccCChhHH-HHHHhC--CCcCEEEEeCChHHHH
Q 009407 215 DPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDD--ANIRAISFVGSNVAGM 268 (535)
Q Consensus 215 ~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~-~~L~~~--~~v~~V~ftGs~~~g~ 268 (535)
.-.....+++++.+.|+..-...+++.+.+.. +.|.+. .+.|.|+.||++..+.
T Consensus 47 ~Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 47 EDHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp CCSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred cCcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 34456778899999998766667777665432 333321 4589999999997654
No 72
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=25.82 E-value=3.6e+02 Score=26.97 Aligned_cols=82 Identities=12% Similarity=0.190 Sum_probs=49.9
Q ss_pred CCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC--hh----HHHHHHhCCCcCEEEE------eCChHHHHHHH
Q 009407 204 GNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT--HD----TVNAICDDANIRAISF------VGSNVAGMHIY 271 (535)
Q Consensus 204 GN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~--~~----~~~~L~~~~~v~~V~f------tGs~~~g~~i~ 271 (535)
||.-|+--+ ...+...+.++...|+-+.-+--+.|+ .+ ..+.+.++|+++.|+. |-...+++.|.
T Consensus 248 g~I~ii~Ng---~Gl~~~t~D~i~~~G~~~aN~lD~gG~a~~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~ 324 (397)
T 3ufx_B 248 GNIGIIGNG---AGLVMYTLDLVNRVGGKPANFLDIGGGAKADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVI 324 (397)
T ss_dssp SSEEEEESS---HHHHHHHHHHHHHTTCCBSEEEECCSCCCHHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHH
T ss_pred CcEEEEecC---ccHHHHHHHHHHHcCCCcCCcEecCCCCCHHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHH
Confidence 555554322 444455667788888654322222332 22 3466888999998763 33468888888
Q ss_pred HHHhcC--CCeEEEeCCCc
Q 009407 272 ARASAK--GKRVQSNMGAK 288 (535)
Q Consensus 272 ~~a~~~--~~~v~lelgG~ 288 (535)
++.... .+|++.-+.|.
T Consensus 325 ~a~~~~~~~kPvvv~~~G~ 343 (397)
T 3ufx_B 325 RALEEGLLTKPVVMRVAGT 343 (397)
T ss_dssp HHHTTTCCCSCEEEEEEEE
T ss_pred HHHHhhCCCCcEEEEccCC
Confidence 877654 58887777664
No 73
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=24.85 E-value=1.1e+02 Score=29.64 Aligned_cols=60 Identities=7% Similarity=-0.094 Sum_probs=41.3
Q ss_pred HHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeC
Q 009407 219 SIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNM 285 (535)
Q Consensus 219 ~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lel 285 (535)
+..+++.+.+.|++.. +..+ .+.|+.++++|.|+..-.+..-..+...+.+.+|.|++|=
T Consensus 39 ~~~~~~~~~~~~~~~~----~~~~---~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EK 98 (337)
T 3ip3_A 39 LSKLEKAISEMNIKPK----KYNN---WWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAFVEK 98 (337)
T ss_dssp CHHHHHHHHTTTCCCE----ECSS---HHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHHHHHcCCCCc----ccCC---HHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCCcEEEeC
Confidence 3455565556666322 1122 4556666789999999988888888888888888877774
No 74
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=22.32 E-value=70 Score=27.91 Aligned_cols=52 Identities=19% Similarity=0.219 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHHcCCCcCceecccCChhHH-HH---HHhCCCcCEEEEeCChHHH
Q 009407 216 PGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NA---ICDDANIRAISFVGSNVAG 267 (535)
Q Consensus 216 ~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~-~~---L~~~~~v~~V~ftGs~~~g 267 (535)
-..+..+++.+.+.|+..-...+++.+.+.. ++ +.+..+.|.|+.||++..+
T Consensus 30 Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 30 DKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred cChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 3455778889999998766566666554332 33 3332358999999998665
No 75
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=21.93 E-value=4.4e+02 Score=26.20 Aligned_cols=83 Identities=17% Similarity=0.269 Sum_probs=50.2
Q ss_pred cCCeeeecCCCCChHHHHHHHHHHHHcCC-CcCceecccCC--hh----HHHHHHhCCCcCEEEE--eCC----hHHHHH
Q 009407 203 CGNTFVLKPSEKDPGASIMLAELAMEAGL-PDGVLNIVHGT--HD----TVNAICDDANIRAISF--VGS----NVAGMH 269 (535)
Q Consensus 203 aGN~VVlKps~~~~~~~~~l~~~l~~aGl-P~g~v~vv~g~--~~----~~~~L~~~~~v~~V~f--tGs----~~~g~~ 269 (535)
-||.-++--+ ...+.....++...|. |.+-+-+ .|+ .+ ..+.++++|+|+.|+. .|+ +.+++.
T Consensus 256 ~G~Ig~~~nG---aGl~m~t~D~i~~~Gg~~aNflD~-gG~a~~~~~~~~~~~il~d~~v~~ilvni~ggi~~~~~vA~g 331 (388)
T 2nu8_B 256 DGNIGCMVNG---AGLAMGTMDIVKLHGGEPANFLDV-GGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADG 331 (388)
T ss_dssp SSSEEEEESS---HHHHHHHHHHHHHTTCCBCEEEEC-CSCCCHHHHHHHHHHHHTSTTCCEEEEEEESCSSCHHHHHHH
T ss_pred CCEEEEEeCC---CchhhhhhHHHHHcCCCcCceeEe-cCCCCHHHHHHHHHHHhcCCCCCEEEEEecCCcCCchHHHHH
Confidence 4666555422 3444455677888876 3333332 232 22 2356788999998876 454 466666
Q ss_pred HHHHHhc--CCCeEEEeCCCcc
Q 009407 270 IYARASA--KGKRVQSNMGAKN 289 (535)
Q Consensus 270 i~~~a~~--~~~~v~lelgG~~ 289 (535)
|.++..+ ..+|++.-++|.|
T Consensus 332 ii~a~~~~~~~~pivvrl~G~n 353 (388)
T 2nu8_B 332 IIGAVAEVGVNVPVVVRLEGNN 353 (388)
T ss_dssp HHHHHHHHTCCSCEEEEEESTT
T ss_pred HHHHHHhcCCCCeEEEEeCCCC
Confidence 7666655 5678888887764
No 76
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=21.90 E-value=1.2e+02 Score=21.60 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=25.2
Q ss_pred HHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 87 AKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 87 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
++.....|..++.++|..+.......-++...++.
T Consensus 30 ~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 30 LKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556789999999999988776665555555543
No 77
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=20.77 E-value=68 Score=24.26 Aligned_cols=37 Identities=38% Similarity=0.578 Sum_probs=29.5
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT 242 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~ 242 (535)
.++|-+|+|-. |..+..++.++.+.++|+ ++-.+-|+
T Consensus 19 ~~~n~vVikT~---PG~A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 19 DSGNLAVLRTP---PGAAHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp EETTEEEEECS---TTCHHHHHHHHHHHCCTT-EEEEEECS
T ss_pred ecCCEEEEEeC---CCcHHHHHHHHHhCCCCC-eEEEEecC
Confidence 37999999977 456788999998887876 77777764
Done!